Citrus Sinensis ID: 020880

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Protein Sequence
MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAEAT
Secondary Structure (PSIPRED)
ccccEEEEEccccHHHHHHHHHHHHHcccccEEEEEcccccccHHHcccccccccccccccccHHHHHHHHHHHccccEEEEcccccccccccccHHHHHHccccccHHHHHHHHHHHccccEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEEcEEEEccccccccccccHHHHHHHHHHcccccEEEcccccccccHHHHHHHHHHHHHHHHccccccccEEEEcccccccHHHHHHHHHHHHccccccEEEcccccccccccccccccccHHHHHHHcccccccHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccEEEEEccHcHHHHHHHHHHHHccccEEEEcHHEEcccHHHHHHHcccccEEEEEEEcccHHHHHHHHHHHccccEEEEEEHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccccHcHHcHHHHHHHHHHHccEEcccccccccccccHHHHHHHHHHHHHccccccEccccHcHHHHHEHHHHHHHHHHHHHccccccccccEEEEcccccHHHHHHHHHHHHHHHcccccccccccccccEEEccccccEEEcHHHHHHHHccccccHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MSKKRVLVVGGTGYLGQHLLQGlseiegkpydvaathhstplpqllldalphsfvffdvdlksgsgfdavalkfgqpdvvvncaalsvprvcendpdsamsinvPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYkeedeiapvnvygksKVAAEKFIYEKCSNFAILRSsiiygpqtispvpkslpiqWIDSVLskgekveffhdecrcpvyVRDVVKIILALTNRWLSEDKQMQLLLnvggpdrvsRVQMAEVVAEIRGYSTslikpvsassvdrgvqspadiSMDITKLVQtlnidpvtykdgvKLTLAAEAT
Flexible Loop (DISEMBL)
MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKeedeiapvnvyGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFfhdecrcpvyVRDVVKIILALtnrwlsedKQMQLLLnvggpdrvsRVQMAEVVAEIRGystslikpvsassvdRGVQSPADISMDITKLVqtlnidpvtykdgVKLTLAAEAT
Low Complexity Region (SEG)
MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAEAT
Disordered region (IsUnstruct)
*****VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPV*************DISMDITKLVQTLNIDPVTYKDGVKLTL*****
Disordered Region (DISOPRED)
*SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID**LSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAE**
Disordered Region (DISEMBL)
MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAEAT
Disordered Region (DISPRO)
**KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAEAT
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAEAT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	320	2.2.26 [Sep-21-2011]
Q5R4E0	334	Methionine adenosyltransf	yes	no	0.906	0.868	0.290	1e-25
Q9NZL9	334	Methionine adenosyltransf	yes	no	0.906	0.868	0.290	1e-25
Q5BJJ6	323	Methionine adenosyltransf	yes	no	0.906	0.897	0.255	3e-25
Q29RI9	334	Methionine adenosyltransf	yes	no	0.915	0.877	0.275	2e-24
Q99LB6	334	Methionine adenosyltransf	yes	no	0.906	0.868	0.277	9e-24
Q5U2R0	334	Methionine adenosyltransf	yes	no	0.906	0.868	0.277	2e-23
Q566L8	334	Methionine adenosyltransf	yes	no	0.909	0.871	0.243	5e-20
Q4QQZ4	334	Methionine adenosyltransf	N/A	no	0.909	0.871	0.240	2e-19
P55463	296	Probable dTDP-4-dehydrorh	yes	no	0.703	0.760	0.262	2e-12
P39631	283	Spore coat polysaccharide	yes	no	0.590	0.667	0.265	3e-11

>sp|Q5R4E0|MAT2B_PONAB Methionine adenosyltransferase 2 subunit beta OS=Pongo abelii GN=MAT2B PE=2 SV=1

 Score =  117 bits (292), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           +RVLV G TG LG+ + +   E +   +           P+           F  V+L  
Sbjct: 29  RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74

Query: 64  GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
            +    +   F QP V+V+CAA   P V EN PD+A  +NV +S    L+         L
Sbjct: 75  SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131

Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
           I++S+D V++G    Y+EED  AP+N+YGK+K+  EK + E     A+LR  I+YG   +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189

Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
             + +S      D V    +     H + R P +V+DV  +   L  + +  D  ++   
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248

Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
           +  G +++++ +MA  +A+     +S ++P++ S V  G Q P +  +D +KL +TL I 
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 306

Query: 304 PVT-YKDGVKLTL 315
             T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319

Non-catalytic regulatory subunit of S-adenosylmethionine synthetase 2 (MAT2A), an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates the activity of S-adenosylmethionine synthetase 2 by changing its kinetic properties, rendering the enzyme more susceptible to S-adenosylmethionine inhibition.
Pongo abelii (taxid: 9601)

>sp|Q9NZL9|MAT2B_HUMAN Methionine adenosyltransferase 2 subunit beta OS=Homo sapiens GN=MAT2B PE=1 SV=1

 Score =  117 bits (292), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           +RVLV G TG LG+ + +   E +   +           P+           F  V+L  
Sbjct: 29  RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74

Query: 64  GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
            +    +   F QP V+V+CAA   P V EN PD+A  +NV +S    L+         L
Sbjct: 75  SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131

Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
           I++S+D V++G    Y+EED  AP+N+YGK+K+  EK + E     A+LR  I+YG   +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189

Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
             + +S      D V    +     H + R P +V+DV  +   L  + +  D  ++   
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248

Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
           +  G +++++ +MA  +A+     +S ++P++ S V  G Q P +  +D +KL +TL I 
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 306

Query: 304 PVT-YKDGVKLTL 315
             T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319

Non-catalytic regulatory subunit of S-adenosylmethionine synthetase 2 (MAT2A), an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates the activity of S-adenosylmethionine synthetase 2 by changing its kinetic properties, rendering the enzyme more susceptible to S-adenosylmethionine inhibition.

Homo sapiens (taxid: 9606)

>sp|Q5BJJ6|MAT2B_DANRE Methionine adenosyltransferase 2 subunit beta OS=Danio rerio GN=mat2b PE=2 SV=1

 Score =  115 bits (289), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 148/313 (47%), Gaps = 23/313 (7%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           +RVLV G TG LG+ + +   E +   +D     ++   P            F   +L  
Sbjct: 18  RRVLVTGATGLLGRAVYK---EFKNNDWDALGCGYNRARP-----------FFLKCNLLD 63

Query: 64  GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
                 V   F QP V+V+CAA   P V E   ++AM++NV +      +   E   + L
Sbjct: 64  EDAVRGVIQSF-QPHVIVHCAAERRPDVVERHTEAAMNLNVHACA----TLAKEAGGSFL 118

Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
           I++STD V++G    Y E D   P+N+YGKSK+  E+ I   C   A+LR  I++G   +
Sbjct: 119 IYISTDYVFDGRNPPYGENDAPNPLNLYGKSKLEGEREILRHCPGAAVLRVPILFG--EV 176

Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
             V +S      + V    E     H + R P Y  DV ++   +  R L +D+ ++ + 
Sbjct: 177 EKVEESAVTVLFERVQEGAESCTIDHCQQRFPTYTNDVARVCRNMAERAL-QDQSLRGIF 235

Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL-VQTLNI 302
           +    +++++ +M   +A+     +S + P++      G Q P +  ++ ++L +  L++
Sbjct: 236 HYSAKEQMTKYEMTCAIADAFNLPSSHLIPMTEQPAGAGAQRPQNAQLECSRLELLGLSV 295

Query: 303 DPVTYKDGVKLTL 315
           +   +K+ ++ +L
Sbjct: 296 ESTPFKNAIRDSL 308

Non-catalytic regulatory subunit of S-adenosylmethionine synthetase 2 (MAT2A), an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates the activity of S-adenosylmethionine synthetase 2 by changing its kinetic properties, rendering the enzyme more susceptible to S-adenosylmethionine inhibition.

Danio rerio (taxid: 7955)

>sp|Q29RI9|MAT2B_BOVIN Methionine adenosyltransferase 2 subunit beta OS=Bos taurus GN=MAT2B PE=2 SV=1

 Score =  113 bits (283), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 154/316 (48%), Gaps = 23/316 (7%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
           +  +RVL+ G TG LG+ + +   E +   +           P+           F  V+
Sbjct: 26  IPNRRVLITGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 71

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
           L   +    +   F QP V+V+CAA   P V EN PD+A  +NV +S    L+       
Sbjct: 72  LLDSNAVHHIIYDF-QPHVIVHCAAERRPDVVENHPDAASQLNVDAS--GNLAKEAAAIG 128

Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
             LI++S+D V++G    Y+EED   P+N+YGK+K+  EK + E     A+LR  ++YG 
Sbjct: 129 AFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG- 187

Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
             +  + +S      D V    +     H + R P +V+DV  +   L  + +  D  ++
Sbjct: 188 -EVERLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIK 245

Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
              +  G +++++ +MA  +A+     +S ++P++ S V  G Q P +  +D ++L +TL
Sbjct: 246 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-VGAQRPRNAQLDCSRL-ETL 303

Query: 301 NIDPVT-YKDGVKLTL 315
            I   T ++ G+K +L
Sbjct: 304 GIGQRTPFRIGIKESL 319

Non-catalytic regulatory subunit of S-adenosylmethionine synthetase 2 (MAT2A), an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates the activity of S-adenosylmethionine synthetase 2 by changing its kinetic properties, rendering the enzyme more susceptible to S-adenosylmethionine inhibition.

Bos taurus (taxid: 9913)

>sp|Q99LB6|MAT2B_MOUSE Methionine adenosyltransferase 2 subunit beta OS=Mus musculus GN=Mat2b PE=2 SV=1

 Score =  111 bits (277), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 152/313 (48%), Gaps = 23/313 (7%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           +RVL+ G TG LG+ + +   E +   +           P+           F  V+L  
Sbjct: 29  RRVLITGATGLLGRAVYK---EFQQSNWHTVGCGFRRARPK-----------FEQVNLLD 74

Query: 64  GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
                 +   F QP V+V+CAA   P V E+ PD+A  +NV +S    L+         L
Sbjct: 75  SEAVHHLIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVGAS--GNLAKEAAAIGAFL 131

Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
           I++S+D V++G    Y EED  +P+N+YGK+K+  EK + E     A+LR  ++YG   +
Sbjct: 132 IYISSDYVFDGTNPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYG--EV 189

Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
             + +S      D V    +     H + R P +V+DV  +   L  + +  D  ++   
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 248

Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
           +  G +++++ +MA  +A+     +S ++P++ S V  G Q P +  +D +KL +TL I 
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVI-GAQRPKNAQLDCSKL-ETLGIG 306

Query: 304 PVT-YKDGVKLTL 315
             T ++ G+K +L
Sbjct: 307 QRTPFRTGIKESL 319

Non-catalytic regulatory subunit of S-adenosylmethionine synthetase 2 (MAT2A), an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates the activity of S-adenosylmethionine synthetase 2 by changing its kinetic properties, rendering the enzyme more susceptible to S-adenosylmethionine inhibition.

Mus musculus (taxid: 10090)

>sp|Q5U2R0|MAT2B_RAT Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus GN=Mat2b PE=2 SV=1

 Score =  110 bits (274), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 152/313 (48%), Gaps = 23/313 (7%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           +RVL+ G TG LG+ + +   E +   +           P+           F  V+L  
Sbjct: 29  RRVLITGATGLLGRAVYK---EFQQSNWHAVGCGFRRARPK-----------FEQVNLLD 74

Query: 64  GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
                 +   F QP V+V+CAA   P V E+ PD+A  +NV +S    L+         L
Sbjct: 75  SEAVHHLIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVGAS--GNLAKEAAAIGAFL 131

Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
           I++S+D V++G    Y EED  +P+N+YGK+K+  EK + E     A+LR  ++YG   +
Sbjct: 132 IYISSDYVFDGTNPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYG--EV 189

Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
             + +S      D V    +     H + R P +V+DV  +   L  + +  D  ++   
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 248

Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
           +  G +++++ +MA  +A+     +S ++P++ S V  G Q P +  +D +KL +TL I 
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVI-GAQRPKNAQLDCSKL-ETLGIG 306

Query: 304 PVT-YKDGVKLTL 315
             T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319

Non-catalytic regulatory subunit of S-adenosylmethionine synthetase 2 (MAT2A), an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates the activity of S-adenosylmethionine synthetase 2 by changing its kinetic properties, rendering the enzyme more susceptible to S-adenosylmethionine inhibition.

Rattus norvegicus (taxid: 10116)

>sp|Q566L8|MAT2B_XENTR Methionine adenosyltransferase 2 subunit beta OS=Xenopus tropicalis GN=mat2b PE=2 SV=1

 Score = 99.0 bits (245), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 149/312 (47%), Gaps = 21/312 (6%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           +R L+ G TG LG+ + +   E +   + V    +S   P+           F  ++L  
Sbjct: 29  RRALITGATGLLGRAVYK---EFKENSWHVLGCGYSRARPR-----------FEYLNLLD 74

Query: 64  GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
            +   A+   F +P V+++CAA   P + E+ P+ A  +NV +S    L+         L
Sbjct: 75  AAAVKALIQDF-KPHVIIHCAAERRPDIVESQPEFASLLNVVAS--ENLAKEAAGVGAFL 131

Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
           I++S+D V++G    Y+E+    P+N+YGK+K+  E+ +       A+LR  ++YG   +
Sbjct: 132 IYVSSDYVFDGTSPPYREDSVPNPLNLYGKTKLEGERAVLHNNEGAAVLRVPVLYG--DV 189

Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
             + +S      D V    +     H + R P YV+DV  + L LT R L +D  ++ + 
Sbjct: 190 EKLSESAVTILFDKVQFSNKSANMDHWQQRFPTYVKDVASVCLQLTERRL-QDPSIKGIY 248

Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
           +  G +++++ +M   +A+     +S ++P++   V      P +  +D +KL +     
Sbjct: 249 HWSGNEQMTKYEMTCAMADAFNLPSSHLRPITDEPVG-ATPRPWNPQLDCSKLEKIGIGQ 307

Query: 304 PVTYKDGVKLTL 315
              ++ G++ +L
Sbjct: 308 RTPFRVGIRESL 319

Non-catalytic regulatory subunit of S-adenosylmethionine synthetase 2 (MAT2A), an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates the activity of S-adenosylmethionine synthetase 2 by changing its kinetic properties, rendering the enzyme more susceptible to S-adenosylmethionine inhibition.

Xenopus tropicalis (taxid: 8364)

>sp|Q4QQZ4|MAT2B_XENLA Methionine adenosyltransferase 2 subunit beta OS=Xenopus laevis GN=mat2b PE=2 SV=1

 Score = 96.7 bits (239), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 151/312 (48%), Gaps = 21/312 (6%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           +R L+ G TG LG+ + +   E +   + V    +S   P+           F  ++L  
Sbjct: 29  RRALITGATGLLGRAVYK---EFKENSWHVLGCGYSRARPR-----------FECLNLLD 74

Query: 64  GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
            +   A+   F +P V+++CAA   P + E+ P+ A  +NV +S    L+         L
Sbjct: 75  EAAVKALIQDF-KPHVIIHCAAERRPDIVESQPELASLLNVVAS--ENLAKVAAGVGAFL 131

Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
           I++S+D V++G    Y+E+    P+N+YGK+K+  E+ + +     A+LR  ++YG   +
Sbjct: 132 IYVSSDYVFDGTSPPYREDSIPHPLNLYGKTKLDGERAVLQNNEGAAVLRVPVMYG--DV 189

Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
             + +S      D V    +     H + R P +V+DV  + L LT R + +D  ++ + 
Sbjct: 190 EKLSESAVTILFDKVQFSNKSANLDHCQQRFPTHVKDVATVCLQLTERKI-QDPSIKGIY 248

Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
           +  G +++++ ++A  +A+     +S ++P++   V      P +  +D +KL +     
Sbjct: 249 HWSGNEQMTKYEIACAMADAFNLPSSHLRPITDEPVG-ATPRPWNPQLDCSKLEKMGIGQ 307

Query: 304 PVTYKDGVKLTL 315
              ++ G++ TL
Sbjct: 308 RTPFRVGIRETL 319

Non-catalytic regulatory subunit of S-adenosylmethionine synthetase 2 (MAT2A), an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates the activity of S-adenosylmethionine synthetase 2 by changing its kinetic properties, rendering the enzyme more susceptible to S-adenosylmethionine inhibition.

Xenopus laevis (taxid: 8355)

>sp|P55463|RMLD_RHISN Probable dTDP-4-dehydrorhamnose reductase OS=Rhizobium sp. (strain NGR234) GN=NGR_a03570 PE=3 SV=1

 Score = 73.6 bits (179), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 15/240 (6%)

Query: 69  AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
           A +++   PD++V+ AA +     E++P  A ++N     V  L+         +IHLST
Sbjct: 43  ASSIRDAAPDIIVSLAAYTAVDKAESEPYEAFAVNRDG--VQALAEAAAGLGVPVIHLST 100

Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
           D V++G K   Y EED   P++VYG+SK+  E  +     N  ILR+S +Y     + V 
Sbjct: 101 DYVFDGAKPVPYCEEDRTGPISVYGRSKLEGEFAVASANPNHTILRTSWVYSRYGQNFVK 160

Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK-QMQLLLNVG 246
           K L +          +++    D+  CP    D+   ++ +  R LS     ++ + ++ 
Sbjct: 161 KMLRLA------DTNDELNVVADQLGCPTSADDISVAVMTIARRMLSSSSADLRGIFHLS 214

Query: 247 GPDRVSRVQMAE----VVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
           G    S    A+    V  EI G     +  +SA+      + PA+  +   KL +T  I
Sbjct: 215 GSGEASWAAFAKYVFSVYDEITGRQIK-VHDISAAEYPTPARRPANSRLHCDKLERTFGI 273

Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. RmlD uses NADH and NADPH nearly equally well.

Rhizobium sp. (strain NGR234) (taxid: 394)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: 3

>sp|P39631|SPSK_BACSU Spore coat polysaccharide biosynthesis protein SpsK OS=Bacillus subtilis (strain 168) GN=spsK PE=3 SV=3

 Score = 69.7 bits (169), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 41/230 (17%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
           +VLV G  G LG  L + L +     Y+V A      L + +++     ++ HSF  +  
Sbjct: 3   KVLVTGAGGQLGLELCRQLKQ---AGYEVIA------LTKKMMNIADQRSVRHSFGHY-- 51

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
                           QPD+VVN AA +    CE + D A  IN   +    L S     
Sbjct: 52  ----------------QPDIVVNSAAFTSVDQCEKELDKAYLINGIGAYYTALESTRIGA 95

Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
           +   +H+STD V+ G  +  Y+E+D + P  +YGKSK   E+ I     +  I+R+S +Y
Sbjct: 96  Q--YVHISTDYVFNGKGTQPYREDDPLDPKTIYGKSKRLGEELIRLTTKDSTIIRTSWVY 153

Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
           G    + V   L +          +++    D+   P Y +D+ + ++ L
Sbjct: 154 GHGGSNFVETMLKLA------ETKQELRVVSDQIGSPTYTKDLAEAVIKL 197

Bacillus subtilis (strain 168) (taxid: 224308)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
255541506	318	dtdp-4-dehydrorhamnose dehydrogenase, pu	0.971	0.977	0.756	1e-136
357514671	317	Methionine adenosyltransferase 2 subunit	0.984	0.993	0.752	1e-133
225454083	318	PREDICTED: methionine adenosyltransferas	0.990	0.996	0.734	1e-133
297810115	323	predicted protein [Arabidopsis lyrata su	0.990	0.981	0.725	1e-132
356520448	324	PREDICTED: methionine adenosyltransferas	0.990	0.978	0.728	1e-131
30678677	327	Rossmann-fold NAD(P)-binding domain-cont	0.984	0.963	0.7	1e-127
449454474	314	PREDICTED: methionine adenosyltransferas	0.981	1.0	0.700	1e-127
449507663	314	PREDICTED: methionine adenosyltransferas	0.981	1.0	0.697	1e-127
110736655	327	putative dTDP-6-deoxy-L-mannose-dehydrog	0.984	0.963	0.696	1e-126
334186246	331	Rossmann-fold NAD(P)-binding domain-cont	0.984	0.951	0.691	1e-125

>gi|255541506|ref|XP_002511817.1| dtdp-4-dehydrorhamnose dehydrogenase, putative [Ricinus communis] gi|223548997|gb|EEF50486.1| dtdp-4-dehydrorhamnose dehydrogenase, putative [Ricinus communis]

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/316 (75%), Positives = 276/316 (87%), Gaps = 5/316 (1%)

Query: 2   SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS--TPLPQLLLDALPHSFVFFDV 59
           +KK+VLVVGGTGYLGQHLLQGLSEIE  PYD+A THHS  TP PQ LLDA+ HS   F V
Sbjct: 3   TKKKVLVVGGTGYLGQHLLQGLSEIEDSPYDLAFTHHSNSTP-PQPLLDAVRHS-PSFHV 60

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
           DL++G GF A+  +FGQPDVVVNCAA+S+PR CE DP +AMSIN+PSSLVNWLS+F E +
Sbjct: 61  DLQTGDGFQAITHEFGQPDVVVNCAAISLPRACEKDPATAMSINIPSSLVNWLSTF-EGR 119

Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
           + LLIHLSTDQVYEGVKSFYKEEDE  PVNVYGKSK+ AEKFI E+C NF ILRSSII+G
Sbjct: 120 DTLLIHLSTDQVYEGVKSFYKEEDEAVPVNVYGKSKLEAEKFISERCLNFVILRSSIIFG 179

Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
           PQTISPVPKSLPIQWIDSVLSKGE++EFFHDE RCPVYV+DVV +IL+LTNRW+SE KQM
Sbjct: 180 PQTISPVPKSLPIQWIDSVLSKGEQIEFFHDEFRCPVYVKDVVAVILSLTNRWISESKQM 239

Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
           QLLLNVGGPDRVSRVQMAE VA+IRGY+++LIK VSA+SVDRGV SPADISM+I+++V+ 
Sbjct: 240 QLLLNVGGPDRVSRVQMAEAVADIRGYNSALIKSVSAASVDRGVLSPADISMNISRIVRE 299

Query: 300 LNIDPVTYKDGVKLTL 315
           L+  P  ++ GVKLTL
Sbjct: 300 LHFSPTPFRHGVKLTL 315

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357514671|ref|XP_003627624.1| Methionine adenosyltransferase 2 subunit beta [Medicago truncatula] gi|355521646|gb|AET02100.1| Methionine adenosyltransferase 2 subunit beta [Medicago truncatula]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 240/319 (75%), Positives = 269/319 (84%), Gaps = 4/319 (1%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
           MSKK++L+VGGTGYLGQHLLQ  S    +   VA T+HS+PL Q LLDA P S   F VD
Sbjct: 1   MSKKKILIVGGTGYLGQHLLQ--SYYSNQSLTVAFTYHSSPLLQPLLDAFPDS-QSFQVD 57

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
           LKSG GFDA++  FGQPDVVVNCAA+SVPR CENDPD+A +INVPSSLV WL SF +N  
Sbjct: 58  LKSGIGFDAISNAFGQPDVVVNCAAISVPRACENDPDTANAINVPSSLVKWLQSFKQN-S 116

Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
            LLIHLSTDQVYEG KSFYKEED   PVNVYGK+KVAAEKFI E   NFAILRSSIIYGP
Sbjct: 117 TLLIHLSTDQVYEGEKSFYKEEDIPIPVNVYGKTKVAAEKFISENFPNFAILRSSIIYGP 176

Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
           QT+SPVPKSLPIQWIDS LSK EKV FFHDE RCP++V+D+V IILALT++WLSE KQMQ
Sbjct: 177 QTVSPVPKSLPIQWIDSALSKREKVNFFHDEFRCPIFVKDLVTIILALTSQWLSEGKQMQ 236

Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
           LLLN GGPDRVSRV+MA+ VA+ RGY TSLIK VSAS+VDRGV+SPADISMDIT+LVQTL
Sbjct: 237 LLLNAGGPDRVSRVEMADAVAQFRGYDTSLIKAVSASTVDRGVKSPADISMDITRLVQTL 296

Query: 301 NIDPVTYKDGVKLTLAAEA 319
           NI+PV++KDGVKLTL  EA
Sbjct: 297 NINPVSFKDGVKLTLTTEA 315

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454083|ref|XP_002266457.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1 [Vitis vinifera] gi|297745208|emb|CBI40288.3| unnamed protein product [Vitis vinifera]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/320 (73%), Positives = 273/320 (85%), Gaps = 3/320 (0%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
           MSKKRVLVVGGTGYLGQHLLQG SEI+G P+D+A THHSTP PQ L+ A+PHS  F  V+
Sbjct: 1   MSKKRVLVVGGTGYLGQHLLQGFSEIQGHPFDLAFTHHSTP-PQPLVHAIPHSRAF-HVN 58

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
           L+SG GF+A++  FGQP VVVNCAA+SVPR CE DP +AMSINVPSSLV WL SF E+  
Sbjct: 59  LQSGEGFEAISRSFGQPHVVVNCAAISVPRSCEMDPAAAMSINVPSSLVKWLLSFEESN- 117

Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
            LLIHLSTDQVYEGVKSFYKEEDE  PVNVYGKSKVAAE+FI    SN+AILRSSII GP
Sbjct: 118 TLLIHLSTDQVYEGVKSFYKEEDETVPVNVYGKSKVAAEQFISTNFSNYAILRSSIIIGP 177

Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
           Q ISPVPKSLPIQWID VLS+G+K++FF+DE RCPVYV+DVV IILALT  W++E KQM+
Sbjct: 178 QAISPVPKSLPIQWIDGVLSRGDKMDFFYDEFRCPVYVKDVVAIILALTTGWIAEGKQMK 237

Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
           L+LN GGPDRVSR Q+AE VA++RGY TSLIKPVSASSVDRGV+SP DISMDIT+L+QTL
Sbjct: 238 LILNAGGPDRVSRAQIAETVADVRGYDTSLIKPVSASSVDRGVKSPVDISMDITELIQTL 297

Query: 301 NIDPVTYKDGVKLTLAAEAT 320
           +I P + + GV+LTL ++A+
Sbjct: 298 HISPTSLRVGVQLTLESQAS 317

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810115|ref|XP_002872941.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297318778|gb|EFH49200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  476 bits (1224), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/321 (72%), Positives = 269/321 (83%), Gaps = 4/321 (1%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDV 59
           M K +V++VGGTG+LGQHLLQ  +   G   YDVA THHS+PLP+ LLDA PH F  F V
Sbjct: 1   MDKTKVVIVGGTGFLGQHLLQAFAGNNGGDLYDVAFTHHSSPLPRRLLDAFPH-FPAFSV 59

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
           DLKSG GF++++  FGQPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLS+F  NK
Sbjct: 60  DLKSGLGFNSISQDFGQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSTFERNK 119

Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
             LLIHLSTDQVYEGVKSFYKEEDE   VNVYGKSKVAAE  I +KC NFAILRSSII G
Sbjct: 120 -TLLIHLSTDQVYEGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQNFAILRSSIIVG 178

Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW-LSEDKQ 238
           PQT+SP+PK+LPIQWIDS L KG+ VEFFHDE RCP+YV+D+V I L L +RW +S++KQ
Sbjct: 179 PQTVSPLPKTLPIQWIDSSLKKGDTVEFFHDEFRCPIYVKDLVNITLKLIDRWVVSDEKQ 238

Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
           MQL+LN GGP+R+SRVQMA+VVAE+RGY  SLIK VSASSVDRGV SPADISMDITKL+Q
Sbjct: 239 MQLVLNAGGPERLSRVQMAQVVAEVRGYDMSLIKHVSASSVDRGVVSPADISMDITKLIQ 298

Query: 299 TLNIDPVTYKDGVKLTLAAEA 319
           TL I P ++KDGV+LTL +E+
Sbjct: 299 TLEITPTSFKDGVRLTLESES 319

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520448|ref|XP_003528874.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like [Glycine max]

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 236/324 (72%), Positives = 266/324 (82%), Gaps = 7/324 (2%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIE---GKPY--DVAATHHSTPLPQLLLDALPHSFV 55
           MSK ++LVVGGTGYLGQHLLQ         G P+  D+A THHS+P PQ LLDA+P S  
Sbjct: 1   MSKVKILVVGGTGYLGQHLLQAYVHANANNGTPFAFDLAFTHHSSPPPQPLLDAIPFSLP 60

Query: 56  FFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSF 115
           F  VDLK+G GF+A++  FGQPDVVVNCAA+SVPR CE DP +A +INVPSSLV WL SF
Sbjct: 61  F-QVDLKTGFGFEAISNTFGQPDVVVNCAAISVPRACEIDPATAHAINVPSSLVKWLQSF 119

Query: 116 TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
            E +  LLIHLSTDQVYEG KSFYKEED   PVNVYGK+KVAAE+FI E   NFAILRSS
Sbjct: 120 -EKRSTLLIHLSTDQVYEGEKSFYKEEDIAVPVNVYGKTKVAAEQFISENYPNFAILRSS 178

Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
           IIYGPQT+SPVPKSLPIQWID  L+KGEKVEFFHDE RCP+YV+D+V IIL LT++W+SE
Sbjct: 179 IIYGPQTVSPVPKSLPIQWIDGALAKGEKVEFFHDEFRCPIYVKDLVTIILTLTSQWISE 238

Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
            KQMQLLLNVGG DRVSR+QMAE VAE RGY  SLIK VSASSVDRGV+SPADISMDIT+
Sbjct: 239 GKQMQLLLNVGGADRVSRLQMAEAVAEFRGYDASLIKSVSASSVDRGVKSPADISMDITR 298

Query: 296 LVQTLNIDPVTYKDGVKLTLAAEA 319
           LVQTL I PV++KDGV+LTL  EA
Sbjct: 299 LVQTLRIHPVSFKDGVRLTLTTEA 322

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30678677|ref|NP_191965.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332656499|gb|AEE81899.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 224/320 (70%), Positives = 265/320 (82%), Gaps = 5/320 (1%)

Query: 3   KKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
           K +VL+VGGTGYLGQHLLQ  +   G   + YDVA THHS+PLP  LLDA PHS  F  V
Sbjct: 4   KTKVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAF-PV 62

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
           DLKSG G ++++  F QPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLSSF  NK
Sbjct: 63  DLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNK 122

Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
             LLIHLSTDQVY+GVKSFYKEEDE   VNVYGKSKVAAE  I +KC +FAILRSSII+G
Sbjct: 123 -TLLIHLSTDQVYQGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFG 181

Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
           PQT+SP+PK+LPIQWIDS L KG+ V+FFHDE RCP+YV+D+V I   L +RW+S+DKQM
Sbjct: 182 PQTVSPLPKTLPIQWIDSSLKKGDTVDFFHDEFRCPIYVKDLVNITFKLIDRWVSDDKQM 241

Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
           +L+LN GGP+R+SRVQMA++VAE+RGY  SLIK VSASS+DRGV SPADISMDITKL+ T
Sbjct: 242 RLVLNAGGPERLSRVQMAQMVAEVRGYDLSLIKHVSASSIDRGVVSPADISMDITKLIHT 301

Query: 300 LNIDPVTYKDGVKLTLAAEA 319
           L + P ++K+GV+LTL +E+
Sbjct: 302 LELSPTSFKEGVRLTLDSES 321

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454474|ref|XP_004144979.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like [Cucumis sativus] gi|449472854|ref|XP_004153715.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like [Cucumis sativus]

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 222/317 (70%), Positives = 262/317 (82%), Gaps = 3/317 (0%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
           M KK+VLVVGGTGYLGQHLL G SEI+G PYD+A T+HS   P+ LL ALPH  + F VD
Sbjct: 1   MRKKKVLVVGGTGYLGQHLLSGFSEIDGVPYDIAFTYHSFA-PEALLGALPH-LLSFQVD 58

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
           LKSG GFD +   FGQPD+VVNCAA+SVPR CE DP SA S+NVP+++  WL SF E + 
Sbjct: 59  LKSGQGFDTITENFGQPDIVVNCAAISVPRACEVDPVSAFSVNVPTAIGTWLLSF-EGRN 117

Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
            L IHLSTDQVYEGV+SFY EEDE  PVNVYGKSK+AAE+++ EK SNFAILRSSII+GP
Sbjct: 118 TLFIHLSTDQVYEGVESFYNEEDETIPVNVYGKSKLAAEQYVSEKFSNFAILRSSIIFGP 177

Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
           QTISPVPKSLP+QWID+ LS+G +VEFFHDE RCPVYV+DVV +I+ L   W+SE KQMQ
Sbjct: 178 QTISPVPKSLPVQWIDATLSEGNEVEFFHDEFRCPVYVKDVVNVIITLIKTWISEGKQMQ 237

Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
           LLLNVGGP+RVSRV+MAE VAEIRG+  SLIK VSASS+DRGV+SPADISM+I KL+Q L
Sbjct: 238 LLLNVGGPNRVSRVEMAETVAEIRGHKKSLIKRVSASSIDRGVKSPADISMNIGKLIQIL 297

Query: 301 NIDPVTYKDGVKLTLAA 317
            + PV++ DGV+LTL +
Sbjct: 298 AMSPVSFTDGVRLTLCS 314

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449507663|ref|XP_004163095.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like [Cucumis sativus]

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/317 (69%), Positives = 262/317 (82%), Gaps = 3/317 (0%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
           M KK+VLVVGGTGYLGQHLL G SEI+G PYD+A T+HS   P+ LL ALPH  + F VD
Sbjct: 1   MRKKKVLVVGGTGYLGQHLLSGFSEIDGVPYDIAFTYHSFA-PEALLGALPH-LLSFQVD 58

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
           LKSG GFD +   FGQPD+VVNCAA+SVPR CE DP SA S+NVP+++  WL SF E + 
Sbjct: 59  LKSGQGFDTITENFGQPDIVVNCAAISVPRACEVDPVSAFSVNVPTAIGTWLLSF-EGRN 117

Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
            L IHLSTDQVYEGV+SFY EEDE  P+NVYGKSK+AAE+++ EK SNFAILRSSII+GP
Sbjct: 118 TLFIHLSTDQVYEGVESFYNEEDETIPLNVYGKSKLAAEQYVSEKFSNFAILRSSIIFGP 177

Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
           QTISPVPKSLP+QWID+ LS+G +VEFFHDE RCPVYV+DVV +I+ L   W+SE KQMQ
Sbjct: 178 QTISPVPKSLPVQWIDATLSEGNEVEFFHDEFRCPVYVKDVVNVIITLIKTWISEGKQMQ 237

Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
           LLLNVGGP+RVSRV+MAE VAEIRG+  SLIK VSASS+DRGV+SPADISM+I KL+Q L
Sbjct: 238 LLLNVGGPNRVSRVEMAETVAEIRGHKKSLIKRVSASSIDRGVKSPADISMNIGKLIQIL 297

Query: 301 NIDPVTYKDGVKLTLAA 317
            + PV++ DGV+LTL +
Sbjct: 298 AMSPVSFTDGVRLTLCS 314

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110736655|dbj|BAF00291.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Arabidopsis thaliana]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 223/320 (69%), Positives = 264/320 (82%), Gaps = 5/320 (1%)

Query: 3   KKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
           K +VL+VGGTGYLGQHLLQ  +   G   + YDVA THHS+PLP  LLDA PHS  F  V
Sbjct: 4   KTKVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAF-PV 62

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
           DLKSG G ++++  F QPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLSSF  NK
Sbjct: 63  DLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNK 122

Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
             LLIHLSTDQVY+GVKSFYKEEDE   VNVYGKSKVAAE  I +KC +FAIL SSII+G
Sbjct: 123 -TLLIHLSTDQVYQGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILGSSIIFG 181

Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
           PQT+SP+PK+LPIQWIDS L KG+ V+FFHDE RCP+YV+D+V I   L +RW+S+DKQM
Sbjct: 182 PQTVSPLPKTLPIQWIDSSLKKGDTVDFFHDEFRCPIYVKDLVNITFKLIDRWVSDDKQM 241

Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
           +L+LN GGP+R+SRVQMA++VAE+RGY  SLIK VSASS+DRGV SPADISMDITKL+ T
Sbjct: 242 RLVLNAGGPERLSRVQMAQMVAEVRGYDLSLIKHVSASSIDRGVVSPADISMDITKLIHT 301

Query: 300 LNIDPVTYKDGVKLTLAAEA 319
           L + P ++K+GV+LTL +E+
Sbjct: 302 LELSPTSFKEGVRLTLDSES 321

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334186246|ref|NP_001190643.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332656502|gb|AEE81902.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 224/324 (69%), Positives = 265/324 (81%), Gaps = 9/324 (2%)

Query: 3   KKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
           K +VL+VGGTGYLGQHLLQ  +   G   + YDVA THHS+PLP  LLDA PHS  F  V
Sbjct: 4   KTKVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAF-PV 62

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
           DLKSG G ++++  F QPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLSSF  NK
Sbjct: 63  DLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNK 122

Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
             LLIHLSTDQVY+GVKSFYKEEDE   VNVYGKSKVAAE  I +KC +FAILRSSII+G
Sbjct: 123 -TLLIHLSTDQVYQGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFG 181

Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
           PQT+SP+PK+LPIQWIDS L KG+ V+FFHDE RCP+YV+D+V I   L +RW+S+DKQM
Sbjct: 182 PQTVSPLPKTLPIQWIDSSLKKGDTVDFFHDEFRCPIYVKDLVNITFKLIDRWVSDDKQM 241

Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASS----VDRGVQSPADISMDITK 295
           +L+LN GGP+R+SRVQMA++VAE+RGY  SLIK VSASS    +DRGV SPADISMDITK
Sbjct: 242 RLVLNAGGPERLSRVQMAQMVAEVRGYDLSLIKHVSASSLFCQIDRGVVSPADISMDITK 301

Query: 296 LVQTLNIDPVTYKDGVKLTLAAEA 319
           L+ TL + P ++K+GV+LTL +E+
Sbjct: 302 LIHTLELSPTSFKEGVRLTLDSES 325

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
UNIPROTKB|I3LU04	325	MAT2B "Uncharacterized protein	0.909	0.895	0.284	1.2e-26
UNIPROTKB|Q9NZL9	334	MAT2B "Methionine adenosyltran	0.787	0.754	0.306	8.4e-26
UNIPROTKB|E2RT47	334	MAT2B "Uncharacterized protein	0.787	0.754	0.302	1.1e-25
UNIPROTKB|Q29RI9	334	MAT2B "Methionine adenosyltran	0.787	0.754	0.295	1.6e-24
MGI|MGI:1913667	334	Mat2b "methionine adenosyltran	0.728	0.697	0.302	2.6e-24
RGD|1593534	334	Mat2b "methionine adenosyltran	0.728	0.697	0.302	4.2e-24
UNIPROTKB|Q5U2R0	334	Mat2b "Methionine adenosyltran	0.728	0.697	0.302	4.2e-24
ASPGD|ASPL0000013988	314	AN8032 [Emericella nidulans (t	0.706	0.719	0.296	5.4e-23
ZFIN|ZDB-GENE-030131-786	334	mat2b "methionine adenosyltran	0.787	0.754	0.268	1.3e-22
UNIPROTKB|E1BTX6	334	MAT2B "Uncharacterized protein	0.728	0.697	0.294	2.1e-22

UNIPROTKB|I3LU04 MAT2B "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 89/313 (28%), Positives = 153/313 (48%)

Query:     4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
             +RVL+ G TG LG+ + +   E +   +           P+           F  V+L  
Sbjct:    29 RRVLITGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74

Query:    64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
              +    +   F QP V+V+CAA   P V EN PD+A  +NV +S  N            L
Sbjct:    75 SNAVHHIIYDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS-GNLAKEAVAAIGAFL 132

Query:   124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
             I++STD V++G    Y+EED  +P+N+YGK+K+  EK + E     A+LR  ++YG   +
Sbjct:   133 IYISTDYVFDGKNPPYREEDMPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYGE--V 190

Query:   184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
               + +S      D V    +     H + R P +V+DV  +   L  + +  D  ++   
Sbjct:   191 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 249

Query:   244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
             +  G +++++ +MA  +A+     +S ++P++ S V  G Q P +  +D +KL +TL I 
Sbjct:   250 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 307

Query:   304 PVT-YKDGVKLTL 315
               T ++ G+K +L
Sbjct:   308 QRTPFRIGIKESL 320

GO:0048270 "methionine adenosyltransferase regulator activity" evidence=IEA

GO:0048269 "methionine adenosyltransferase complex" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0045226 "extracellular polysaccharide biosynthetic process" evidence=IEA

GO:0008831 "dTDP-4-dehydrorhamnose reductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q9NZL9 MAT2B "Methionine adenosyltransferase 2 subunit beta" [Homo sapiens (taxid:9606)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 80/261 (30%), Positives = 136/261 (52%)

Query:    56 FFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSF 115
             F  V+L   +    +   F QP V+V+CAA   P V EN PD+A  +NV +S    L+  
Sbjct:    67 FEQVNLLDSNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKE 123

Query:   116 TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
                    LI++S+D V++G    Y+EED  AP+N+YGK+K+  EK + E     A+LR  
Sbjct:   124 AAAVGAFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIP 183

Query:   176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
             I+YG   +  + +S      D V    +     H + R P +V+DV  +   L  + +  
Sbjct:   184 ILYGE--VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML- 240

Query:   236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
             D  ++   +  G +++++ +MA  +A+     +S ++P++ S V  G Q P +  +D +K
Sbjct:   241 DPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSK 299

Query:   296 LVQTLNIDPVT-YKDGVKLTL 315
             L +TL I   T ++ G+K +L
Sbjct:   300 L-ETLGIGQRTPFRIGIKESL 319

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008831 "dTDP-4-dehydrorhamnose reductase activity" evidence=IEA

GO:0045226 "extracellular polysaccharide biosynthetic process" evidence=IEA

GO:0006730 "one-carbon metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006556 "S-adenosylmethionine biosynthetic process" evidence=IEA;IDA

GO:0048270 "methionine adenosyltransferase regulator activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IC

GO:0048269 "methionine adenosyltransferase complex" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006805 "xenobiotic metabolic process" evidence=TAS

GO:0032259 "methylation" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

UNIPROTKB|E2RT47 MAT2B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 79/261 (30%), Positives = 135/261 (51%)

Query:    56 FFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSF 115
             F  V+L        +   F QP V+V+CAA   P V EN PD+A  +NV +S    L+  
Sbjct:    67 FEQVNLLDSEAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKE 123

Query:   116 TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
                    LI++S+D V++G    Y+EED  +P+N+YGK+K+  EK + E     A+LR  
Sbjct:   124 AALIGAFLIYISSDYVFDGTNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIP 183

Query:   176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
             ++YG   +  + +S      D V    +     H + R P +V+DV  +   L  + +  
Sbjct:   184 VLYGE--VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML- 240

Query:   236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
             D  ++   +  G +++++ +MA  +A+     +S ++P++ S V  G Q P +  +D TK
Sbjct:   241 DPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCTK 299

Query:   296 LVQTLNIDPVT-YKDGVKLTL 315
             L +TL I   T ++ G+K +L
Sbjct:   300 L-ETLGIGQRTPFRIGIKESL 319

GO:0048270 "methionine adenosyltransferase regulator activity" evidence=IEA

GO:0048269 "methionine adenosyltransferase complex" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0045226 "extracellular polysaccharide biosynthetic process" evidence=IEA

GO:0008831 "dTDP-4-dehydrorhamnose reductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q29RI9 MAT2B "Methionine adenosyltransferase 2 subunit beta" [Bos taurus (taxid:9913)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 77/261 (29%), Positives = 135/261 (51%)

Query:    56 FFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSF 115
             F  V+L   +    +   F QP V+V+CAA   P V EN PD+A  +NV +S    L+  
Sbjct:    67 FEQVNLLDSNAVHHIIYDF-QPHVIVHCAAERRPDVVENHPDAASQLNVDAS--GNLAKE 123

Query:   116 TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
                    LI++S+D V++G    Y+EED   P+N+YGK+K+  EK + E     A+LR  
Sbjct:   124 AAAIGAFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKAVLENNLGAAVLRIP 183

Query:   176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
             ++YG   +  + +S      D V    +     H + R P +V+DV  +   L  + +  
Sbjct:   184 VLYGE--VERLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML- 240

Query:   236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
             D  ++   +  G +++++ +MA  +A+     +S ++P++ S V  G Q P +  +D ++
Sbjct:   241 DPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVV-GAQRPRNAQLDCSR 299

Query:   296 LVQTLNIDPVT-YKDGVKLTL 315
             L +TL I   T ++ G+K +L
Sbjct:   300 L-ETLGIGQRTPFRIGIKESL 319

GO:0006556 "S-adenosylmethionine biosynthetic process" evidence=IEA

GO:0048270 "methionine adenosyltransferase regulator activity" evidence=IEA

GO:0048269 "methionine adenosyltransferase complex" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006730 "one-carbon metabolic process" evidence=IEA

GO:0045226 "extracellular polysaccharide biosynthetic process" evidence=IEA

GO:0008831 "dTDP-4-dehydrorhamnose reductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:1913667 Mat2b "methionine adenosyltransferase II, beta" [Mus musculus (taxid:10090)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 73/241 (30%), Positives = 128/241 (53%)

Query:    76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
             QP V+V+CAA   P V E+ PD+A  +NV +S    L+         LI++S+D V++G 
Sbjct:    86 QPHVIVHCAAERRPDVVESQPDAASQLNVGAS--GNLAKEAAAIGAFLIYISSDYVFDGT 143

Query:   136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
                Y EED  +P+N+YGK+K+  EK + E     A+LR  ++YG   +  + +S      
Sbjct:   144 NPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYGE--VEKLEESAVTVMF 201

Query:   196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
             D V    +     H + R P +V+DV  +   L  + +  D  ++   +  G +++++ +
Sbjct:   202 DKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTFHWSGNEQMTKYE 260

Query:   256 MAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVT-YKDGVKLT 314
             MA  +A+     +S ++P++ S V  G Q P +  +D +KL +TL I   T ++ G+K +
Sbjct:   261 MACAIADAFNLPSSHLRPITDSPVI-GAQRPKNAQLDCSKL-ETLGIGQRTPFRTGIKES 318

Query:   315 L 315
             L
Sbjct:   319 L 319

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0006556 "S-adenosylmethionine biosynthetic process" evidence=ISO

GO:0006730 "one-carbon metabolic process" evidence=IEA

GO:0008831 "dTDP-4-dehydrorhamnose reductase activity" evidence=IEA

GO:0045226 "extracellular polysaccharide biosynthetic process" evidence=IEA

GO:0048269 "methionine adenosyltransferase complex" evidence=ISO

GO:0048270 "methionine adenosyltransferase regulator activity" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=IEA

RGD|1593534 Mat2b "methionine adenosyltransferase II, beta" [Rattus norvegicus (taxid:10116)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 73/241 (30%), Positives = 128/241 (53%)

Query:    76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
             QP V+V+CAA   P V E+ PD+A  +NV +S    L+         LI++S+D V++G 
Sbjct:    86 QPHVIVHCAAERRPDVVESQPDAASQLNVGAS--GNLAKEAAAIGAFLIYISSDYVFDGT 143

Query:   136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
                Y EED  +P+N+YGK+K+  EK + E     A+LR  ++YG   +  + +S      
Sbjct:   144 NPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYGE--VEKLEESAVTVMF 201

Query:   196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
             D V    +     H + R P +V+DV  +   L  + +  D  ++   +  G +++++ +
Sbjct:   202 DKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTFHWSGNEQMTKYE 260

Query:   256 MAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVT-YKDGVKLT 314
             MA  +A+     +S ++P++ S V  G Q P +  +D +KL +TL I   T ++ G+K +
Sbjct:   261 MACAIADAFNLPSSHLRPITDSPVI-GAQRPKNAQLDCSKL-ETLGIGQRTPFRIGIKES 318

Query:   315 L 315
             L
Sbjct:   319 L 319

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0006556 "S-adenosylmethionine biosynthetic process" evidence=IEA;ISO

GO:0006730 "one-carbon metabolic process" evidence=IEA

GO:0008831 "dTDP-4-dehydrorhamnose reductase activity" evidence=IEA

GO:0045226 "extracellular polysaccharide biosynthetic process" evidence=IEA

GO:0048269 "methionine adenosyltransferase complex" evidence=ISO

GO:0048270 "methionine adenosyltransferase regulator activity" evidence=ISO

UNIPROTKB|Q5U2R0 Mat2b "Methionine adenosyltransferase 2 subunit beta" [Rattus norvegicus (taxid:10116)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 73/241 (30%), Positives = 128/241 (53%)

Query:    76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
             QP V+V+CAA   P V E+ PD+A  +NV +S    L+         LI++S+D V++G 
Sbjct:    86 QPHVIVHCAAERRPDVVESQPDAASQLNVGAS--GNLAKEAAAIGAFLIYISSDYVFDGT 143

Query:   136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
                Y EED  +P+N+YGK+K+  EK + E     A+LR  ++YG   +  + +S      
Sbjct:   144 NPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYGE--VEKLEESAVTVMF 201

Query:   196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
             D V    +     H + R P +V+DV  +   L  + +  D  ++   +  G +++++ +
Sbjct:   202 DKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTFHWSGNEQMTKYE 260

Query:   256 MAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVT-YKDGVKLT 314
             MA  +A+     +S ++P++ S V  G Q P +  +D +KL +TL I   T ++ G+K +
Sbjct:   261 MACAIADAFNLPSSHLRPITDSPVI-GAQRPKNAQLDCSKL-ETLGIGQRTPFRIGIKES 318

Query:   315 L 315
             L
Sbjct:   319 L 319

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008831 "dTDP-4-dehydrorhamnose reductase activity" evidence=IEA

GO:0045226 "extracellular polysaccharide biosynthetic process" evidence=IEA

ASPGD|ASPL0000013988 AN8032 [Emericella nidulans (taxid:162425)]

 Score = 240 (89.5 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
 Identities = 72/243 (29%), Positives = 125/243 (51%)

Query:    76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
             +P +V++CAA   P +C+ DP+ A  +NV ++    L+  T  +  LL+++STD V+ GV
Sbjct:    61 KPQIVIHCAANRSPDLCDKDPERARRVNVDATRT--LAELTAERNILLVYISTDYVFPGV 118

Query:   136 KSF--YKEEDEIAPVNVYGKSKVAAEKFIYE--KCSNFAI-LRSSIIYGPQTISPVPKSL 190
             +    Y+ +    P N+YG+ K   E+ + E  K S   I LR  ++YG  T +   +S 
Sbjct:   119 EGEAPYEADAPTKPPNLYGELKRDGEQVVLEATKKSGMGIILRVPVLYG--TANENSESA 176

Query:   191 PIQWIDSVL-SKGEKVEFFHDEC--RCPVYVRDVVKIILALTNRWLSEDKQ-MQL--LLN 244
                 +DSV  ++ E      D+   R P    DV +++  +  ++L E  Q M+L  +L 
Sbjct:   177 VNTLVDSVWKAQDENAGIKMDDWAQRYPTNTEDVARVLRDIVIKYLKERGQIMKLPKILQ 236

Query:   245 VGGPDRVSRVQMAEVVAEIRGYSTS-LIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
                 D++++ +M E  AEI G S   +++    +  +  VQ P D  +  TK+++ L ID
Sbjct:   237 FSSEDKMTKYEMCEKFAEILGVSLKGMVRNKEGNDPNASVQRPYDTHLS-TKVLKDLGID 295

Query:   304 PVT 306
               T
Sbjct:   296 VQT 298

GO:0005575 "cellular_component" evidence=ND

GO:0008831 "dTDP-4-dehydrorhamnose reductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0045226 "extracellular polysaccharide biosynthetic process" evidence=IEA

ZFIN|ZDB-GENE-030131-786 mat2b "methionine adenosyltransferase II, beta" [Danio rerio (taxid:7955)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 70/261 (26%), Positives = 130/261 (49%)

Query:    56 FFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSF 115
             F   +L        V  +F QP V+V+CAA   P V E   ++AM++NV +     L+  
Sbjct:    67 FLKCNLLDEDAVRGVIQRF-QPHVIVHCAAERRPDVVERHTEAAMNLNVHACAT--LAK- 122

Query:   116 TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
              E   + LI++STD V++G    Y E D   P+N+YGKSK+  E+ I   C   AILR  
Sbjct:   123 -EAGGSFLIYISTDYVFDGRNPPYGENDAPNPLNLYGKSKLEGEREILRHCPGAAILRVP 181

Query:   176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
             I++G   +  V +S      + V    E     H + R P Y  DV ++   +  R L +
Sbjct:   182 ILFGE--VEKVEESAVTVLFERVQEGAESCTIDHCQQRFPTYTNDVARVCRNMAERAL-Q 238

Query:   236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
             D+ ++ + +    +++++ +M   +A+     +S + P++      G Q P +  ++ ++
Sbjct:   239 DQSLRGIFHYSAKEQMTKYEMTCAIADAFNLPSSHLIPMTEQPAGAGAQRPQNAQLECSR 298

Query:   296 L-VQTLNIDPVTYKDGVKLTL 315
             L +  L+++   +K+ ++ +L
Sbjct:   299 LELLGLSVESTPFKNAIRDSL 319

GO:0045226 "extracellular polysaccharide biosynthetic process" evidence=IEA

GO:0008831 "dTDP-4-dehydrorhamnose reductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006730 "one-carbon metabolic process" evidence=IEA

UNIPROTKB|E1BTX6 MAT2B "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 71/241 (29%), Positives = 123/241 (51%)

Query:    76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
             QP V+V+CAA   P V E+ PD+A  +NV +S    L+         LI++STD V++G 
Sbjct:    86 QPHVIVHCAAERRPDVVESQPDAASQLNVAAS--GNLAKEAAGIGAFLIYISTDYVFDGT 143

Query:   136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
                YKE D   P+N+YGK+K+  EK + E     A+LR  ++YG   +  + +S      
Sbjct:   144 SPPYKETDVPNPLNLYGKTKLEGEKAVLENNEGAAVLRIPVLYGE--VERLEESAVTVMF 201

Query:   196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
             D V    +     H + R P  V+DV  +   L  + +  D  ++   +  G +++++ +
Sbjct:   202 DKVQFSNKSANMDHWQQRFPTNVKDVAVVCRQLAEKRML-DPSIKGTFHWSGNEQMTKYE 260

Query:   256 MAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVT-YKDGVKLT 314
             MA  +A+     +S ++P++   V  G   P +  +D +KL + L I   T ++ G+K +
Sbjct:   261 MACAIADAFNLPSSHLRPITDCPVV-GALRPRNAQLDCSKL-EMLGIGQRTPFRAGIKES 318

Query:   315 L 315
             L
Sbjct:   319 L 319

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008831 "dTDP-4-dehydrorhamnose reductase activity" evidence=IEA

GO:0045226 "extracellular polysaccharide biosynthetic process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0048269 "methionine adenosyltransferase complex" evidence=IEA

GO:0048270 "methionine adenosyltransferase regulator activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	320
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	3e-72
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	3e-46
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	2e-39
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	3e-32
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	7e-32
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	5e-25
cd08946	200	cd08946, SDR_e, extended (e) SDRs	6e-23
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	3e-16
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	8e-16
PRK09987	299	PRK09987, PRK09987, dTDP-4-dehydrorhamnose reducta	2e-14
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	2e-13
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	1e-11
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	1e-10
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	3e-10
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	4e-10
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	2e-09
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	2e-09
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	2e-09
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	5e-09
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	2e-08
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	2e-08
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	4e-08
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	7e-08
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	1e-07
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	2e-07
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	2e-07
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	9e-07
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	4e-06
PRK10217	355	PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase;	1e-05
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	1e-05
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	1e-05
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	2e-05
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-05
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	3e-05
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	4e-05
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	2e-04
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	2e-04
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	2e-04
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	4e-04
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	6e-04
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	8e-04
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	0.003
cd05272	308	cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext	0.004

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score =  224 bits (573), Expect = 3e-72
 Identities = 89/310 (28%), Positives = 148/310 (47%), Gaps = 32/310 (10%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
           ++L+ G TG LG+ L++ L E   + Y+V  T  S                 F +DL   
Sbjct: 1   KILITGATGMLGRALVRLLKE---RGYEVIGTGRSRAS-------------LFKLDLTD- 43

Query: 65  SGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
              DAV       +PDV++NCAA +    CE+DP+ A  +NV +      ++        
Sbjct: 44  --PDAVEEAIRDYKPDVIINCAAYTRVDKCESDPELAYRVNVLAPENLARAAKEVGA--R 99

Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
           LIH+STD V++G K  YKEED   P+NVYGKSK+  E  +      + ILR+S +YG   
Sbjct: 100 LIHISTDYVFDGKKGPYKEEDAPNPLNVYGKSKLLGEVAVLNANPRYLILRTSWLYGELK 159

Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
                ++     +     + ++V   HD+   P Y  D+   IL L  R       +  +
Sbjct: 160 ---NGENFVEWMLRLAA-ERKEVNVVHDQIGSPTYAADLADAILELIERN-----SLTGI 210

Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
            ++     +S+ + A+++A+  G     IKP+++S      + PA+ S+D +KL +   I
Sbjct: 211 YHLSNSGPISKYEFAKLIADALGLPDVEIKPITSSEYPLPARRPANSSLDCSKLEELGGI 270

Query: 303 DPVTYKDGVK 312
            P  +K+ ++
Sbjct: 271 KPPDWKEALR 280

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score =  157 bits (399), Expect = 3e-46
 Identities = 76/317 (23%), Positives = 141/317 (44%), Gaps = 45/317 (14%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
           ++L+ G  G LG  L + L       ++V AT  +                  ++D+   
Sbjct: 2   KILITGANGQLGTELRRAL----PGEFEVIATDRA------------------ELDI--- 36

Query: 65  SGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKE 120
           +  DAV     +  PDVV+N AA +     E++P+ A ++N     +L    +       
Sbjct: 37  TDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV----G 92

Query: 121 NLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
             L+H+STD V++G K   YKE D   P+NVYG+SK+A E+ +        ILR+S +YG
Sbjct: 93  ARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYG 152

Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
               + V      + +  +  +G++++   D+   P Y  D+   IL L  +        
Sbjct: 153 EYGNNFV------KTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKE----- 201

Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
             + ++      S  + A+ + E  G    +I+P++++      + PA+ S+D  KL + 
Sbjct: 202 GGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKA 261

Query: 300 LNIDPVTYKDGVKLTLA 316
             +    +++ +K  L 
Sbjct: 262 FGLSLPEWREALKALLD 278

Length = 281

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score =  140 bits (354), Expect = 2e-39
 Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 40/317 (12%)

Query: 6   VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
           +LV G  G LG+ L + L+E   +  +V A                      ++DL   +
Sbjct: 1   ILVTGANGQLGRELTRLLAE---RGVEVVALDRP------------------ELDL---T 36

Query: 66  GFDAVALKF--GQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKEN 121
             +AVA      +PDVVVN AA +     E++P+ A ++N   P +L    ++    +  
Sbjct: 37  DPEAVAALVREARPDVVVNAAAYTAVDKAESEPELAYAVNALGPGNLAEACAA----RGA 92

Query: 122 LLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
            LIH+STD V++G K   Y+E+D   P+NVYG++K+A E+ +        ILR++ +YG 
Sbjct: 93  PLIHISTDYVFDGAKGGPYREDDPTGPLNVYGRTKLAGEQAVLAANPRHLILRTAWVYGE 152

Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
                   +     +  + ++ +++    D+   P   RD+   +LAL  + L     + 
Sbjct: 153 Y-----GNNFVK-TMLRLAAERDELRVVDDQLGSPTSARDLADALLALIRKRL-RGPALA 205

Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
              ++ G    S    A  + +  G     ++P+  +      + PA+  +D +KL  T 
Sbjct: 206 GTYHLAGSGETSWYDFARAIFDEAGADGGRVRPIPTAEYPTPARRPANSVLDTSKLEATF 265

Query: 301 NIDPVTYKDGVKLTLAA 317
            I    +++ +   L  
Sbjct: 266 GIPLPDWREALAEVLDE 282

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  121 bits (305), Expect = 3e-32
 Identities = 85/327 (25%), Positives = 128/327 (39%), Gaps = 31/327 (9%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
            R+LV GG G++G HL++ L       +DV             LD L     F  +DL  
Sbjct: 1   MRILVTGGAGFIGSHLVERLLA---AGHDVRGLDRLRD----GLDPLLSGVEFVVLDLTD 53

Query: 64  GSGFDAVALKFGQPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
               D +A     PD V++ AA  SVP    +DP   + +NV  +L N L +        
Sbjct: 54  RDLVDELAKGV--PDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTL-NLLEAARAAGVKR 110

Query: 123 LIHLST-DQVYEGVKSFYKEEDEIA--PVNVYGKSKVAAEKFIYEKCS----NFAILRSS 175
            +  S+   VY        +ED     P+N YG SK+AAE+ +            ILR  
Sbjct: 111 FVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPF 170

Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDE--CRCPVYVRDVVKIILALTNRWL 233
            +YGP     +   +   +I  +L     +    D    R  VYV DV   +L       
Sbjct: 171 NVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPD 230

Query: 234 SEDKQMQLLLNVGGPDR-VSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
                   + N+G     ++  ++AE VAE  G    LI  +      R         +D
Sbjct: 231 GG------VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL---GRRGDLREGKLLD 281

Query: 293 ITKLVQTLNIDP-VTYKDGVKLTLAAE 318
           I+K    L  +P V+ ++G+  TL   
Sbjct: 282 ISKARAALGWEPKVSLEEGLADTLEWL 308

Length = 314

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score =  119 bits (301), Expect = 7e-32
 Identities = 86/314 (27%), Positives = 146/314 (46%), Gaps = 39/314 (12%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
           R+L+ G  G LG+ L+Q LS        V A   S                   +DL   
Sbjct: 1   RILITGANGQLGRELVQQLSPEG---RVVVALTRS------------------QLDLTDP 39

Query: 65  SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
              + + L+  +PD VVN AA +     E+DP+ A ++N  +     L+         L+
Sbjct: 40  EALERL-LRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQN--LARAAARHGARLV 96

Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
           H+STD V++G     Y+E+D   P+NVYG+SK+A E+ +     N  I+R+S +YG    
Sbjct: 97  HISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAVRAAGPNALIVRTSWLYGGGGG 156

Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
                   ++ +  +  +GE++    D+   P Y +D+ ++I AL  R L+  + +  L 
Sbjct: 157 RNF-----VRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQR-LARARGVYHLA 210

Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSL-----IKPVSASSVDRGVQSPADISMDITKLVQ 298
           N G   + S  + A+ + E  G    L     +KP+S+    R  + PA   +D TKLV+
Sbjct: 211 NSG---QCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVK 267

Query: 299 TLNIDPVTYKDGVK 312
           TL      +++ ++
Sbjct: 268 TLGTPLPHWREALR 281

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  100 bits (251), Expect = 5e-25
 Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 17/230 (7%)

Query: 6   VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
           +LV GGTG++G HL++    +  + Y+V             L+     F     DL    
Sbjct: 1   ILVTGGTGFIGSHLVR---RLLQEGYEV--IVLGRRRRSESLNTGRIRFHE--GDLTDPD 53

Query: 66  GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
             + + L   QPD V++ AA S       DP   +  NV  +L   L +         + 
Sbjct: 54  ALERL-LAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTL-RLLEAARRAGVKRFVF 111

Query: 126 LSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEK----FIYEKCSNFAILRSSIIYGP 180
            S+ +VY  V      E+  + P++ Y  +K+AAE+    +         ILR   +YGP
Sbjct: 112 ASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGP 171

Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCP-VYVRDVVKIILAL 228
               P    +    I  +L +G+ +    D   R   +YV DV + IL  
Sbjct: 172 GNPDPFVTHVIPALIRRIL-EGKPILLLGDGTQRRDFLYVDDVARAILLA 220

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 93.9 bits (234), Expect = 6e-23
 Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 52/233 (22%)

Query: 6   VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
           +LV GG G++G HL++ L E   + ++V                                
Sbjct: 1   ILVTGGAGFIGSHLVRRLLE---RGHEVVVIDRL-------------------------- 31

Query: 66  GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
                       DVVV+ AAL       ++PD     NV    +N L +  +      ++
Sbjct: 32  ------------DVVVHLAALVGVPASWDNPDEDFETNV-VGTLNLLEAARKAGVKRFVY 78

Query: 126 LSTDQVYEGVKSFYKEEDEI-APVNVYGKSKVAAEKFIYEKCS----NFAILRSSIIYGP 180
            S+  VY   +   +EE+    P++ YG SK+AAE  +            ILR + +YGP
Sbjct: 79  ASSASVYGSPEGLPEEEETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGP 138

Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFF--HDECRCPVYVRDVVK-IILALTN 230
                      +        +G+ +  F   ++ R  ++V DVV+ I+ AL N
Sbjct: 139 GQ--RPRLDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILHALEN 189

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 77.3 bits (191), Expect = 3e-16
 Identities = 92/332 (27%), Positives = 147/332 (44%), Gaps = 52/332 (15%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVA-----ATHHSTPLPQLLLDALPHSFVFFDV 59
           RVLV GG G++G HL++ L E     ++V      +T     LP+     +  +  F + 
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERG---HEVIVLDNLSTGKKENLPE-----VKPNVKFIEG 52

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
           D++     + V   F   D V + AA  SVPR  E DP     +NV  +L N L +  + 
Sbjct: 53  DIRDD---ELVEFAFEGVDYVFHQAAQASVPRSIE-DPIKDHEVNVLGTL-NLLEAARKA 107

Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEI-APVNVYGKSKVAAEKFI--YEKCSNF--AILR 173
                ++ S+  VY       K+ED    P++ Y  SK A E +   + +        LR
Sbjct: 108 GVKRFVYASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLR 167

Query: 174 SSIIYGPQTISPVPKS-----LPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVK-II 225
              +YGP+     P       +PI +I+  L KGE    + D  + R   YV DVV+  +
Sbjct: 168 YFNVYGPRQD---PNGGYAAVIPI-FIERAL-KGEPPTIYGDGEQTRDFTYVEDVVEANL 222

Query: 226 LALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLI-KPVSASSVDRGVQ 284
           LA T     E      + N+G   R S  ++AE++ EI G     +  P     V   + 
Sbjct: 223 LAATAGAGGE------VYNIGTGKRTSVNELAELIREILGKELEPVYAPPRPGDVRHSL- 275

Query: 285 SPADISMDITKLVQTLNIDP-VTYKDGVKLTL 315
                  DI+K  + L  +P V++++G++LT+
Sbjct: 276 ------ADISKAKKLLGWEPKVSFEEGLRLTV 301

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 76.2 bits (188), Expect = 8e-16
 Identities = 88/328 (26%), Positives = 147/328 (44%), Gaps = 44/328 (13%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP--LPQLLLDALPHSFVFFDV-DL 61
           RVL+VGG G++G HL+  L E EG P          P  LP   +D +     + +  DL
Sbjct: 1   RVLIVGGNGFIGSHLVDALLE-EG-PQVRVFDRSIPPYELPLGGVDYIKGD--YENRADL 56

Query: 62  KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
           +S       AL     D V++ A+ + P     +P   +  NV  + V  L +       
Sbjct: 57  ES-------ALV--GIDTVIHLASTTNPATSNKNPILDIQTNVAPT-VQLLEACAAAGIG 106

Query: 122 LLIHLST-DQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCS----NFAILRS 174
            +I  S+   VY GV  +    E D   P++ YG SK+A EK++         ++ +LR 
Sbjct: 107 KIIFASSGGTVY-GVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRI 165

Query: 175 SIIYGP-QTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNR 231
           S  YGP Q        +PI  ++ +L +GE +E + D    R  +Y+ D+V+ ++A    
Sbjct: 166 SNPYGPGQRPDGKQGVIPI-ALNKIL-RGEPIEIWGDGESIRDYIYIDDLVEALMA---- 219

Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD-RGVQSPADIS 290
            L   K ++ + N+G     S   +AE++AEI   +    + V       R    P  + 
Sbjct: 220 -LLRSKGLEEVFNIGSGIGYS---LAELIAEIEKVTG---RSVQVIYTPARTTDVPKIV- 271

Query: 291 MDITKLVQTLNIDP-VTYKDGVKLTLAA 317
           +DI++    L   P ++ +DG++ T   
Sbjct: 272 LDISRARAELGWSPKISLEDGLEKTWQW 299

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|182184 PRK09987, PRK09987, dTDP-4-dehydrorhamnose reductase; Provisional

 Score = 72.2 bits (177), Expect = 2e-14
 Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 3/104 (2%)

Query: 76  QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
           +PDV+VN AA +     E++P+ A  +N  S  V  ++         ++H STD V+ G 
Sbjct: 54  RPDVIVNAAAHTAVDKAESEPEFAQLLNATS--VEAIAKAANEVGAWVVHYSTDYVFPGT 111

Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
               ++E D  AP+NVYG++K+A EK + E C+   I R+S +Y
Sbjct: 112 GDIPWQETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVY 155

Length = 299

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 69.3 bits (170), Expect = 2e-13
 Identities = 47/196 (23%), Positives = 72/196 (36%), Gaps = 46/196 (23%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
           +VLV G  G++G+ L+  L  +        A  ++                   V L   
Sbjct: 1   KVLVTGANGFIGRALVDKL--LSRGEEVRIAVRNAENAEP-------------SVVLAEL 45

Query: 65  SGFDAVALKFGQPDVVVNCAALS-VPRVCENDPDSA-MSINVPSSLVNWLSSFTENKENL 122
              D+    F   D VV+ AA   V      DP S    +N            TE    L
Sbjct: 46  PDIDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVN------------TELTRRL 93

Query: 123 -----------LIHLSTDQVY--EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF 169
                       + LS+ +V     V + + E D  AP + YG+SK+ AE+ + E  ++ 
Sbjct: 94  ARAAARQGVKRFVFLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASD 153

Query: 170 ----AILRSSIIYGPQ 181
                ILR  ++YGP 
Sbjct: 154 GMEVVILRPPMVYGPG 169

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 57/275 (20%), Positives = 102/275 (37%), Gaps = 51/275 (18%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-LLLDALPHSFVFFDVDLK 62
            ++L++GGT ++G+ L++ L         +AA H  T   +      LP        D  
Sbjct: 1   MKILIIGGTRFIGKALVEEL---------LAAGHDVTVFNRGRTKPDLPEGVEHIVGDRN 51

Query: 63  SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
                +   L     DVVV+  A + PR  E   D                   + +   
Sbjct: 52  DRDALEE-LLGGEDFDVVVDTIAYT-PRQVERALD-----------------AFKGRVKQ 92

Query: 123 LIHLSTDQVYEGVKSFYKE-----EDEIAPVNV---YGKSKVAAEKFIYEKCS-NFAILR 173
            I +S+  VY        E     E +   ++    YG+ K AAE  + E  +  + I+R
Sbjct: 93  YIFISSASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVR 152

Query: 174 SSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV---YVRDVVKIILALTN 230
              IYGP   +     L   + D +  +G  +     +    V   +V+D+ + +L    
Sbjct: 153 PPYIYGPGDYTGR---LA-YFFDRLA-RGRPI-LVPGDGHSLVQFIHVKDLARALLGA-- 204

Query: 231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRG 265
                 K +  + N+ G + V+  ++ E  A+  G
Sbjct: 205 --AGNPKAIGGIFNITGDEAVTWDELLEACAKALG 237

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 83/337 (24%), Positives = 145/337 (43%), Gaps = 58/337 (17%)

Query: 5   RVLVVGGTGYLG----QHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
           R+LV GG G++G    +++L    + E    D   T+         L+  P  + F   D
Sbjct: 1   RILVTGGAGFIGSNFVRYILNEHPDAEVIVLD-KLTYAGNLENLADLEDNP-RYRFVKGD 58

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALS-VPRVCENDPDSAMSINVPSSLV--NWLSSFT- 116
           +        +  +  QPD VV+ AA S V R          SI+ P++ +  N + ++T 
Sbjct: 59  IGDRELVSRLFTEH-QPDAVVHFAAESHVDR----------SISGPAAFIETNVVGTYTL 107

Query: 117 ------ENKENLLIHLSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAAEKFI--YEKC 166
                    E    H+STD+VY  ++    + E   +AP + Y  SK A++  +  Y + 
Sbjct: 108 LEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRT 167

Query: 167 SNF--AILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVV 222
                 I R S  YGP       K +P+   +++   G+ +  + D  + R  +YV D  
Sbjct: 168 YGLPALITRCSNNYGPYQF--PEKLIPLMITNALA--GKPLPVYGDGQQVRDWLYVEDHC 223

Query: 223 KII-LALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDR 281
           + I L L    + E        N+GG +  + +++ E + E+ G    LI  V     DR
Sbjct: 224 RAIYLVLEKGRVGE------TYNIGGGNERTNLEVVETILELLGKDEDLITHVE----DR 273

Query: 282 GVQSPA-DI--SMDITKLVQTLNIDP-VTYKDGVKLT 314
               P  D   ++D +K+ + L   P  T+++G++ T
Sbjct: 274 ----PGHDRRYAIDASKIKRELGWAPKYTFEEGLRKT 306

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 59.9 bits (146), Expect = 3e-10
 Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 27/182 (14%)

Query: 2   SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLD---ALPHS-FVF 56
             K +LV GG G +G  L++ + +    P  +         L +L+ +     PH    F
Sbjct: 1   KGKTILVTGGAGSIGSELVRQILK--FGPKKLIVFDRDENKLHELVRELRSRFPHDKLRF 58

Query: 57  FDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
              D++        A K   PD+V + AAL      E++P+ A+  NV  +  N + +  
Sbjct: 59  IIGDVRD-KERLRRAFKERGPDIVFHAAALKHVPSMEDNPEEAIKTNVLGTK-NVIDAAI 116

Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI-----YEKCSNFAI 171
           EN     + +STD      K+       + PVNV G +K  AEK +     Y   + F+ 
Sbjct: 117 ENGVEKFVCISTD------KA-------VNPVNVMGATKRVAEKLLLAKNEYSSSTKFST 163

Query: 172 LR 173
           +R
Sbjct: 164 VR 165

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 59.2 bits (144), Expect = 4e-10
 Identities = 53/278 (19%), Positives = 100/278 (35%), Gaps = 51/278 (18%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL---PQLLLDALPHSFVFFDVD 60
             V V G TG++G++++  L++  G    V   +          ++ D     FV FD+ 
Sbjct: 1   MVVTVFGATGFIGRYVVNRLAKR-G--SQVIVPYRCEAYARRLLVMGDLGQVLFVEFDLR 57

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTEN 118
                  +++       DVV+N       R+ E    S   ++V  P  L        E 
Sbjct: 58  DD-----ESIRKALEGSDVVINLVG----RLYETKNFSFEDVHVEGPERLAKAAK---EA 105

Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
               LIH+S                +    + Y +SK   E+ + E      I+R S+++
Sbjct: 106 GVERLIHISALGA------------DANSPSKYLRSKAEGEEAVREAFPEATIVRPSVVF 153

Query: 179 GPQ-----TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
           G +       + +   LP  +   +     K +        PVYV DV + I       L
Sbjct: 154 GREDRFLNRFAKLLAFLP--FPPLIGGGQTKFQ--------PVYVGDVAEAIARA----L 199

Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLI 271
            + +       + GP   +  ++ E++  + G    ++
Sbjct: 200 KDPETEGKTYELVGPKVYTLAELVELLRRLGGRKRRVL 237

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 86/313 (27%), Positives = 127/313 (40%), Gaps = 52/313 (16%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGK--PYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
           R+LV GG G++G HL+  L E   +    D  ++     +     +    +F F   DL 
Sbjct: 1   RILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENK---AFRFVKRDLL 57

Query: 63  SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
             +  D VA K G  D V + AA    R+   DPD  +  NV ++  N L +   N    
Sbjct: 58  DTA--DKVAKKDG--DTVFHLAANPDVRLGATDPDIDLEENVLAT-YNVLEAMRANGVKR 112

Query: 123 LIHLSTDQVYEGVKSFYKEEDE-IAPVNVYGKSKVAAEKFIYEKCSNFA----ILRSSII 177
           ++  S+  VY   K     ED    P++VYG SK+AAE  I      F     I R + I
Sbjct: 113 IVFASSSTVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFRFANI 172

Query: 178 YGPQTISPV-----------PKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL 226
            GP++   V           P  L       VL  G + + +       +YV D V  +L
Sbjct: 173 VGPRSTHGVIYDFINKLKRNPNEL------EVLGDGRQRKSY-------LYVSDCVDAML 219

Query: 227 ALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
               +      +   + N+G  D +S  ++AE+V E  G    L      S  DRG    
Sbjct: 220 LAWEK----STEGVNIFNLGNDDTISVNEIAEIVIEELG----LKPRFKYSGGDRG--WK 269

Query: 287 AD---ISMDITKL 296
            D   + +DI KL
Sbjct: 270 GDVPYMRLDIEKL 282

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 78/346 (22%), Positives = 139/346 (40%), Gaps = 75/346 (21%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP------------ 51
            ++LV GG G++G + ++ L   +   Y +           + LD L             
Sbjct: 1   MKILVTGGAGFIGSNFVRYLLN-KYPDYKI-----------INLDKLTYAGNLENLEDVS 48

Query: 52  --HSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALS-VPRVCENDPDSAMSINVPSSL 108
               + F   D+      D +  +  + D V++ AA S V R   +DP+  +  NV  + 
Sbjct: 49  SSPRYRFVKGDICDAELVDRL-FEEEKIDAVIHFAAESHVDR-SISDPEPFIRTNVLGT- 105

Query: 109 VNWLSSFTENKENLLIHLSTDQVYEGVKS--FYKEEDEIAPVNVYGKSKVAAEKFI--YE 164
              L +  +      +H+STD+VY  +     + E   +AP + Y  SK AA+  +  Y 
Sbjct: 106 YTLLEAARKYGVKRFVHISTDEVYGDLLDDGEFTETSPLAPTSPYSASKAAADLLVRAYH 165

Query: 165 KCSNF--AILRSSIIYG---------PQTISPV--PKSLPIQWIDSVLSKGEKVEFFHDE 211
           +       I R S  YG         P  I      K LPI         G  V      
Sbjct: 166 RTYGLPVVITRCSNNYGPYQFPEKLIPLFILNALDGKPLPIY------GDGLNV------ 213

Query: 212 CRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLI 271
            R  +YV D  + I  +  +    +     + N+GG + ++ +++ +++ E+ G   SLI
Sbjct: 214 -RDWLYVEDHARAIELVLEKGRVGE-----IYNIGGGNELTNLELVKLILELLGKDESLI 267

Query: 272 KPVSASSVDRGVQSPADI--SMDITKLVQTLNIDP-VTYKDGVKLT 314
             V     DR      D   ++D +K+ + L   P V++++G++ T
Sbjct: 268 TYVK----DRPGH---DRRYAIDSSKIRRELGWRPKVSFEEGLRKT 306

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 44/194 (22%), Positives = 72/194 (37%), Gaps = 30/194 (15%)

Query: 6   VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
           V V GGTG+LG+HL++ L E     + V     S  L +              V +  G 
Sbjct: 1   VFVTGGTGFLGRHLVKRLLE---NGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGD 57

Query: 66  ------GFDAVALKF--GQPDVVVNCAALSVPRVCENDPDSAMSINVPS--SLVNWLSSF 115
                 G  A A +   G+ D V++CAA       +   + A   N+     ++   +  
Sbjct: 58  LTQPNLGLSAAASRELAGKVDHVIHCAASYDF---QAPNEDAWRTNIDGTEHVLELAARL 114

Query: 116 TENKENLLIHLSTDQV---YEGVKSFYKEED---EIAPVNVYGKSKVAAEKFIYEKCS-- 167
              +     ++ST  V    EG     +E +        N Y +SK  AE+ +    +  
Sbjct: 115 DIQR---FHYVSTAYVAGNREGN---IRETELNPGQNFKNPYEQSKAEAEQLVRAAATQI 168

Query: 168 NFAILRSSIIYGPQ 181
              + R SI+ G  
Sbjct: 169 PLTVYRPSIVVGDS 182

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 56.2 bits (136), Expect = 5e-09
 Identities = 43/192 (22%), Positives = 70/192 (36%), Gaps = 33/192 (17%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
             LVVGG+G+LG+HL++ L         V     +  L             F   DL   
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSSSG----RVQFHTGDLTDP 56

Query: 65  SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAM------SINVPSSLVNWLSSFTEN 118
              +    + G P+VV + A+          PD          +NV  +  N + +  + 
Sbjct: 57  QDLEKAFNEKG-PNVVFHTAS----------PDHGSNDDLYYKVNVQGT-RNVIEACRKC 104

Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPV-----NVYGKSKVAAEKFIYE---KCSNF- 169
               L++ S+  V    +      DE  P      + Y ++K  AEK + +     S   
Sbjct: 105 GVKKLVYTSSASVVFNGQDI-INGDESLPYPDKHQDAYNETKALAEKLVLKANDPESGLL 163

Query: 170 -AILRSSIIYGP 180
              LR + I+GP
Sbjct: 164 TCALRPAGIFGP 175

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 78/342 (22%), Positives = 123/342 (35%), Gaps = 63/342 (18%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-------LLDALPH-SFVF 56
            VLV G  G++G HL + L         +   H    L          LLD   H  F F
Sbjct: 1   NVLVTGADGFIGSHLTERL---------LREGHEVRALDIYNSFNSWGLLDNAVHDRFHF 51

Query: 57  FDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
              D++  S  + +  K    DVV + AAL         P S +  NV  +L N L +  
Sbjct: 52  ISGDVRDASEVEYLVKKC---DVVFHLAALIAIPYSYTAPLSYVETNVFGTL-NVLEAAC 107

Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEED-----EIAPVNVYGKSKVAAEKFIYEKCS---- 167
                 ++H ST +VY   +    +ED        P + Y  SK  A++  Y        
Sbjct: 108 VLYRKRVVHTSTSEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGL 167

Query: 168 NFAILRSSIIYGPQ----TISPVP-KSLPIQWIDSVLSKGEK---VEFFHDECRCPVYVR 219
              I+R    YGP+     + P       I      L  G       F  D  R  + + 
Sbjct: 168 PVTIIRPFNTYGPRQSARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFIDIL 227

Query: 220 D----VVKIILALTNRWLSEDKQMQLLLNVGGPD-RVSRVQMAEVVAEIRGYSTSLIKPV 274
           D    V +II   +             +++G P   +   ++ E+V  +        +P 
Sbjct: 228 DAIEAVGEIINNGSGE----------EISIGNPAVELIVEELGEMVLIVYD-DHREYRP- 275

Query: 275 SASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTL 315
             S V+R +        DI K  + L  +P  + +DG++ T+
Sbjct: 276 GYSEVERRIP-------DIRKAKRLLGWEPKYSLRDGLRETI 310

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 54.1 bits (131), Expect = 2e-08
 Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 18/178 (10%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHSFVFFDVDLK 62
            +VLV GG GY+G H ++ L +     ++V    + S      LL        F++ DL 
Sbjct: 1   MKVLVTGGAGYIGSHTVRQLLK---TGHEVVVLDNLSNGHKIALLKLQF---KFYEGDLL 54

Query: 63  SGSGFDAVALKFGQPDVVVNCAALSVPRVCE--NDPDSAMSINVPSSLVNWLSSFTENKE 120
             +   AV  +  + D VV+ AA     V E   +P      NV  +L N + +  +   
Sbjct: 55  DRALLTAV-FEENKIDAVVHFAASIS--VGESVQNPLKYYDNNVVGTL-NLIEAMLQTGV 110

Query: 121 NLLIHLSTDQVY-EGVKSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCS--NFAILR 173
              I  ST  VY E   S   E   +AP+N YG+SK+ +E+ +    K +     ILR
Sbjct: 111 KKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANPFKVVILR 168

Length = 329

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 45/192 (23%), Positives = 73/192 (38%), Gaps = 43/192 (22%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKP--YDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
           ++LV GG GY+G H ++ L E   +    D  +      LP+           F + DL+
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRG---ERITPVTFVEGDLR 57

Query: 63  SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
                D +  +  + D V++ A L               I V  S+   L  +  N    
Sbjct: 58  DRELLDRLFEEH-KIDAVIHFAGL---------------IAVGESVQKPLKYYRNNVVGT 101

Query: 123 LIHLSTDQVYEGVKSF----------------YKEEDEIAPVNVYGKSKVAAEKFI--YE 164
           L  L   Q   GVK F                  E+  + P+N YG+SK+ +E+ +   +
Sbjct: 102 LNLLEAMQQA-GVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSEQILRDLQ 160

Query: 165 KCS---NFAILR 173
           K     ++ ILR
Sbjct: 161 KADPDWSYVILR 172

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score = 52.7 bits (127), Expect = 7e-08
 Identities = 71/339 (20%), Positives = 130/339 (38%), Gaps = 46/339 (13%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKP----------YDVAATHHSTPLPQLLLDALPHS 53
            ++LV G  G++G H+ + L E  G            YDV          +L L      
Sbjct: 1   MKILVTGAAGFIGFHVAKRLLE-RGDEVVGIDNLNDYYDVRLKEA-----RLELLGKSGG 54

Query: 54  FVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLS 113
           F F   DL+       +  K  + D V++ AA +  R    +P + +  N+   L N L 
Sbjct: 55  FKFVKGDLEDREALRRL-FKDHEFDAVIHLAAQAGVRYSLENPHAYVDSNIVGFL-NLLE 112

Query: 114 SFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIA-PVNVYGKSKVAAEKFIYEKCSNFAI 171
                    L++ S+  VY    K  + E+D +  P+++Y  +K A E   +     + I
Sbjct: 113 LCRHFGVKHLVYASSSSVYGLNTKMPFSEDDRVDHPISLYAATKKANELMAHTYSHLYGI 172

Query: 172 ----LRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKII 225
               LR   +YGP      P      +  ++L +G+ ++ F+D    R   Y+ D+V+ +
Sbjct: 173 PTTGLRFFTVYGPWG---RPDMALFLFTKAIL-EGKPIDVFNDGNMSRDFTYIDDIVEGV 228

Query: 226 LALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSA--SSVDRGV 283
           +   +     +       +   PD  +      V          L+  + A   ++ +  
Sbjct: 229 VRALDTPAKPNPN----WDAEAPDPSTSSAPYRVYNIGNNSPVKLMDFIEALEKALGKKA 284

Query: 284 Q------SPADI---SMDITKLVQTLNIDP-VTYKDGVK 312
           +         D+     DI+KL + L   P  + ++GVK
Sbjct: 285 KKNYLPMQKGDVPETYADISKLQRLLGYKPKTSLEEGVK 323

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 70/278 (25%), Positives = 105/278 (37%), Gaps = 52/278 (18%)

Query: 6   VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV-DLKSG 64
           +LV G TG+LG +L++ L     + Y V A   S     +LLD LP   V  D+ D  S 
Sbjct: 1   ILVTGATGFLGSNLVRALLA---QGYRVRALVRSG-SDAVLLDGLPVEVVEGDLTDAAS- 55

Query: 65  SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
                +A      D V + AA     +   D       NV     N L +  E     ++
Sbjct: 56  -----LAAAMKGCDRVFHLAA--FTSLWAKDRKELYRTNV-EGTRNVLDAALEAGVRRVV 107

Query: 125 HLSTDQVYEGVKSFYKEED----EIAPVNVYGKSKVAAEKFIYEKCSNFA-------ILR 173
           H S+     G      +E     E    N Y +SK+ AE  + E     A       I+ 
Sbjct: 108 HTSSIAALGGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLE----AAAEGLDVVIVN 163

Query: 174 SSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALT--- 229
            S ++GP    P         +D +     K+  +       V VRDV +  I A+    
Sbjct: 164 PSAVFGPGDEGPTS-----TGLDVLDYLNGKLPAYPPGGTSFVDVRDVAEGHIAAMEKGR 218

Query: 230 --NRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRG 265
              R++           +GG + +S  Q+ E +AEI G
Sbjct: 219 RGERYI-----------LGGEN-LSFKQLFETLAEITG 244

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 80/339 (23%), Positives = 142/339 (41%), Gaps = 63/339 (18%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDV-AATHHSTPLPQ---LLLDALPHSFVFFDV 59
           KR+L+ GG G+LG HL   L E +G  ++V    +  T   +    L+      F+  DV
Sbjct: 1   KRILITGGAGFLGSHLCDRLLE-DG--HEVICVDNFFTGRKRNIEHLIGHPNFEFIRHDV 57

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
                         + + D + + A  + P   + +P   +  NV  +L N L       
Sbjct: 58  ----------TEPLYLEVDQIYHLACPASPVHYQYNPIKTLKTNVLGTL-NMLGLAKRVG 106

Query: 120 ENLLIHLSTDQVYEG-------VKSFYKEEDEIAPVNVYGKSKVAAEK--FIYEKCSNFA 170
             +L   ST +VY G        +S++   + I P + Y + K  AE     Y +     
Sbjct: 107 ARVL-LASTSEVY-GDPEVHPQPESYWGNVNPIGPRSCYDEGKRVAETLCMAYHRQHGVD 164

Query: 171 ILRSSII--YGPQTISPVPKSLPIQWIDS-VLS-------KGEKVEFFHD--ECRCPVYV 218
           +  + I   YGP+          +   D  V+S       +GE +  + D  + R   YV
Sbjct: 165 VRIARIFNTYGPR----------MHPNDGRVVSNFIVQALRGEPITVYGDGTQTRSFQYV 214

Query: 219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASS 278
            D+V+ ++ L N   S+       +N+G P+  + +++AE+V ++ G S S I  +    
Sbjct: 215 SDLVEGLIRLMN---SDYFGG--PVNLGNPEEFTILELAELVKKLTG-SKSEIVFLPLPE 268

Query: 279 VDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLA 316
            D   + P     DI+K  + L  +P V  ++G++ T+ 
Sbjct: 269 DDPKRRRP-----DISKAKELLGWEPKVPLEEGLRRTIE 302

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 51.4 bits (124), Expect = 2e-07
 Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 15/177 (8%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHSFVFFDVDLKS 63
           +VLV GG GY+G H +  L E  G  YDV    + S    + L         F++ D++ 
Sbjct: 1   KVLVTGGAGYIGSHTVVELLE-AG--YDVVVLDNLSNGHREALPRIEKIRIEFYEGDIRD 57

Query: 64  GSGFDAVALKFGQPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
            +  D V     + D V++ AAL +V    +  P      NV  +L N L +   +    
Sbjct: 58  RAALDKV-FAEHKIDAVIHFAALKAVGESVQK-PLKYYDNNVVGTL-NLLEAMRAHGVKN 114

Query: 123 LIHLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFI--YEKCS--NFAILR 173
            +  S+  VY G        EE  + P N YG++K+  E+ +    K    N+ ILR
Sbjct: 115 FVFSSSAAVY-GEPETVPITEEAPLNPTNPYGRTKLMVEQILRDLAKAPGLNYVILR 170

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 49.1 bits (118), Expect = 9e-07
 Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 11/161 (6%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDV--AATHHSTPLPQ--LLLDALPHSFVFFDVD 60
           R L+ G TG  G +L + L E   K Y+V       S+        L            D
Sbjct: 1   RALITGITGQDGSYLAEFLLE---KGYEVHGIVRRSSSFNTDRIDHLYINKDRITLHYGD 57

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
           L   S     A++  +PD + + AA S  +V  +DP+    +N   +L N L +      
Sbjct: 58  LTDSSSLRR-AIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVNAVGTL-NLLEAIRILGL 115

Query: 121 NLLIHL-STDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAE 159
           +   +  S+ + Y  V+     E     P + Y  SK+ A+
Sbjct: 116 DARFYQASSSEEYGKVQELPQSETTPFRPRSPYAVSKLYAD 156

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 66/373 (17%), Positives = 123/373 (32%), Gaps = 106/373 (28%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDV---------------AATHHSTPLPQLLLD 48
            RVL+ GG G++G +L         + ++V               A    +     +   
Sbjct: 1   MRVLITGGAGFIGSNLA---RFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGV--- 54

Query: 49  ALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSL 108
                FV  D+  +     + +   F   D++++ AA          P    S + P   
Sbjct: 55  ----RFVHGDIRNR-----NDLEDLFEDIDLIIHTAA---------QPSVTTSASSPRLD 96

Query: 109 --VNWLSSFT-------ENKENLLIHLSTDQVY--EGVKSFYKEED---EIAPVNV---- 150
              N L +                I  ST++VY         +E +   E+AP       
Sbjct: 97  FETNALGTLNVLEAARQHAPNAPFIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAG 156

Query: 151 -------------YGKSKVAAEKFIYEKCS----NFAILRSSIIYGPQTISPVPKSLPIQ 193
                        YG SK AA++++ E          + R   + GP+      +     
Sbjct: 157 ISESFPLDFSHSLYGASKGAADQYVQEYGRIFGLKTVVFRCGCLTGPRQFGTEDQGWVAY 216

Query: 194 WIDSVL---------SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
           ++   +           G++V       R  ++  D+V + L       + D++   + N
Sbjct: 217 FLKCAVTGKPLTIFGYGGKQV-------RDVLHSADLVNLYLRQFQ---NPDRRKGEVFN 266

Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPAD----ISMDITKLVQTL 300
           +GG  R + V + E++A     +    K  S    +R    P D    IS DI K+ +  
Sbjct: 267 IGG-GRENSVSLLELIALCEEITG--RKMESYKDENR----PGDQIWYIS-DIRKIKEKP 318

Query: 301 NIDP-VTYKDGVK 312
              P    ++ + 
Sbjct: 319 GWKPERDPREILA 331

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional

 Score = 46.2 bits (109), Expect = 1e-05
 Identities = 61/277 (22%), Positives = 115/277 (41%), Gaps = 26/277 (9%)

Query: 4   KRVLVVGGTGYLGQHLLQG-LSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
           +++L+ GG G++G  L++  ++E       V    ++  L  L   A    F F  VD+ 
Sbjct: 2   RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDIC 61

Query: 63  SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLV------NWLSSFT 116
             +    V  +  QPD V++ AA S      + P + +  N+  +         + ++ T
Sbjct: 62  DRAELARVFTEH-QPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALT 120

Query: 117 ENKENLLI--HLSTDQVY---EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA- 170
           E+K++     H+STD+VY        F+ E    AP + Y  SK +++  +      +  
Sbjct: 121 EDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL 180

Query: 171 ---ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII-L 226
              I   S  YGP       K +P+  ++++  K   V     + R  +YV D  + +  
Sbjct: 181 PTLITNCSNNYGPYHFP--EKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYC 238

Query: 227 ALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEI 263
             T   + E        N+GG +    + + E + E+
Sbjct: 239 VATTGKVGET------YNIGGHNERKNLDVVETICEL 269

Length = 355

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 39/180 (21%), Positives = 63/180 (35%), Gaps = 32/180 (17%)

Query: 6   VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
           +L++G TG++G+ L + L E           H  T     LL          D +  +  
Sbjct: 1   ILILGATGFIGRALARELLE---------QGHEVT-----LLVRNTKRLSKEDQEPVAVV 46

Query: 66  GFDAVALK-----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSL-VNWLSSFTENK 119
             D   L          DVV++ A          + D   + NV  +     +  F    
Sbjct: 47  EGDLRDLDSLSDAVQGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHF---- 102

Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
               I +S+   Y  +     EE E +P + Y   K   E  + E    + I+R  +IYG
Sbjct: 103 ----IFISSLGAYGDL----HEETEPSPSSPYLAVKAKTEAVLREASLPYTIVRPGVIYG 154

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 47/175 (26%), Positives = 70/175 (40%), Gaps = 42/175 (24%)

Query: 4   KRVLVVGGTGYLG-----QHLLQGLSEI------EGKPYDVAATHHSTPLPQLLLDALPH 52
           K VLV GG G +G     Q L     EI      E K Y +            L +  P 
Sbjct: 251 KTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLID---------MELREKFPE 301

Query: 53  -SFVFFDVDLKSGSGFDAV--ALKFGQPDVVVNCAALS-VPRVCENDPDSAMSINVPSSL 108
               F+  D++     D V  A++  + D+V + AAL  VP + E +P+ A+  NV  + 
Sbjct: 302 LKLRFYIGDVRD---RDRVERAMEGHKVDIVFHAAALKHVP-LVEYNPEEAIKTNVLGTE 357

Query: 109 VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIY 163
            N   +  +N     + +STD+              + P NV G +K  AEK   
Sbjct: 358 -NVAEAAIKNGVKKFVLISTDKA-------------VNPTNVMGATKRLAEKLFQ 398

Length = 588

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 69/282 (24%), Positives = 106/282 (37%), Gaps = 78/282 (27%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-----------LLDALPH 52
            ++LV GG G++G + +     I  K  D     H   L +L           + D+  +
Sbjct: 1   MKILVTGGAGFIGSNFV---RYILNKHPD----DHVVNLDKLTYAGNLENLADVEDSPRY 53

Query: 53  SFVFFDV-DLKSGSGFDAVALKFGQPDVVVNCAALS-VPRVCENDPDSAMSINVPSSLV- 109
            FV  D+ D +     D +  ++ QPD VV+ AA S V R          SI+ P+  + 
Sbjct: 54  RFVQGDICDREL---VDRLFKEY-QPDAVVHFAAESHVDR----------SIDGPAPFIQ 99

Query: 110 -NWLSSFT-------ENKENLLIHLSTDQVY---EGVKSFYKEEDEIAPVNVYGKSKVAA 158
            N + ++T          +    H+STD+VY         + E     P + Y  SK A+
Sbjct: 100 TNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAAS 159

Query: 159 EKFI--YEKCSNF--AILRSSIIYG---------PQTISPV--PKSLPI--------QW- 194
           +  +  Y +       I R S  YG         P  I      K LP+         W 
Sbjct: 160 DLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWL 219

Query: 195 --------IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
                   ID VL+KG+  E ++          +VVK I  L
Sbjct: 220 YVEDHCRAIDLVLTKGKIGETYNIGGGNERTNLEVVKTICEL 261

Length = 340

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 19/120 (15%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP------QLLLDALPHSF 54
           +S K  LV G +  +G+ + + L+  EG    V      +           + +A     
Sbjct: 3   LSGKVALVTGASSGIGRAIARALAR-EG--ARVVVAARRSEEEAAEALAAAIKEAGGGRA 59

Query: 55  VFFDVDLKSGSG-----FDAVALKFGQPDVVVNCAALSVPR-----VCENDPDSAMSINV 104
                D+            A   +FG+ D++VN A ++ P      + E D D  + +N+
Sbjct: 60  AAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNL 119

Length = 251

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 49/204 (24%), Positives = 77/204 (37%), Gaps = 40/204 (19%)

Query: 8   VVGGTGYLGQHLLQGL--SEIEGKPYD-VAATHHSTPLPQLLLDALPHSFVFFDV----- 59
           + G TG+LG+ LL+ L  S  E K Y  V A    + L + L   L    +F  +     
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESAL-ERLRQELLKYGLFDRLKALER 59

Query: 60  ------DL-KSGSGFDAVALKF--GQPDVVVNCAALSVPRVCENDP-DSAMSINVPSS-- 107
                 DL +   G      +    + DV+++ AA     V   +P     + NV  +  
Sbjct: 60  IIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAAT----VNFVEPYSDLRATNVLGTRE 115

Query: 108 LVNWLSSFTENKENLLIHLST----DQVYEGVKSFYKEEDEIAPV------NVYGKSKVA 157
           ++         K+    H+ST     +    ++    + DE  P       N Y +SK  
Sbjct: 116 VLRLAKQM---KKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWL 172

Query: 158 AEKFIYEKCSNF--AILRSSIIYG 179
           AE+ + E        I R SII G
Sbjct: 173 AEQLVREAAGGLPVVIYRPSIITG 196

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 46/230 (20%), Positives = 82/230 (35%), Gaps = 30/230 (13%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
            VLV GG+G+ G+ L++ L E  G   + +D+A      P  + L      +  F   D+
Sbjct: 1   SVLVTGGSGFFGERLVKQLLERGGTYVRSFDIA------PPGEALSAWQHPNIEFLKGDI 54

Query: 62  KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
                 + V       D V + AA+          D    +NV  +  N L +       
Sbjct: 55  TD---RNDVEQALSGADCVFHTAAIVPL---AGPRDLYWEVNVGGTQ-NVLDACQRCGVQ 107

Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIA----PVNVYGKSKVAAEKFIYEKCSN----FAILR 173
             ++ S+  V  G ++ +  ++ +       ++Y ++K  AE  + E           LR
Sbjct: 108 KFVYTSSSSVIFGGQNIHNGDETLPYPPLDSDMYAETKAIAEIIVLEANGRDDLLTCALR 167

Query: 174 SSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECR-CPVYVRDVV 222
            + I+GP     VP        +       K  F          YV ++ 
Sbjct: 168 PAGIFGPGDQGLVPILF-----EWAEKGLVKFVFGRGNNLVDFTYVHNLA 212

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 46/172 (26%), Positives = 64/172 (37%), Gaps = 46/172 (26%)

Query: 6   VLVVGGTGYLG-----QHLLQGLSEI------EGKPYDVAATHHSTPLPQLLLDALPHSF 54
           VLV GG G +G     Q L     +I      E K Y++          Q L        
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIR---------QELRQEYNDPK 51

Query: 55  VFFDVDLKSGSGFDA----VALKFGQPDVVVNCAALS-VPRVCENDPDSAMSINVPSSLV 109
           + F +    G   D      A++    D V + AAL  VP + E +P  A+  NV  +  
Sbjct: 52  LRFFI----GDVRDRERLERAMEQHGVDTVFHAAALKHVP-LVEYNPMEAIKTNVLGTE- 105

Query: 110 NWLSSFTENKENLLIHLSTDQ-VYEGVKSFYKEEDEIAPVNVYGKSKVAAEK 160
           N   +  EN     + +STD+ V               P NV G +K  AEK
Sbjct: 106 NVAEAAIENGVEKFVLISTDKAVN--------------PTNVMGATKRLAEK 143

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-LPQLL-LDALPHSFVFFDV-D 60
           KRVLV G TG+ G  L   L E+  K    +    + P L +L  LD    S    D+ D
Sbjct: 5   KRVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPNLFELANLDNKISS-TRGDIRD 63

Query: 61  LKSGSGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
           L      +A+  A++  +P++V + AA  + R+   DP      NV  + VN L +  E 
Sbjct: 64  L------NALREAIREYEPEIVFHLAAQPLVRLSYKDPVETFETNVMGT-VNLLEAIRET 116

Query: 119 KE-NLLIHLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAE 159
                ++++++D+ YE  +    Y+E D +   + Y  SK  AE
Sbjct: 117 GSVKAVVNVTSDKCYENKEWGWGYRENDPLGGHDPYSSSKGCAE 160

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 75/342 (21%), Positives = 124/342 (36%), Gaps = 65/342 (19%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           +R LV G  G++G HL + L   EG     A       + Q   D   H      VDL+ 
Sbjct: 1   QRALVTGAGGFIGSHLAERLKA-EGHYVRGADWKSPEHMTQPTDDDEFHL-----VDLRE 54

Query: 64  GSGFDAVALKFGQPDVVVNCAA-------LSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
                         D V + AA       +          ++ ++ N+       L +  
Sbjct: 55  MENCLKATEGV---DHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNM-------LEAAR 104

Query: 117 ENKENLLIHLSTDQVY------EGVKSFYKEEDEI--APVNVYGKSKVAAEKFIYEKCSN 168
            N     +  S+  VY      E      +EED     P + YG  K+A E+     C +
Sbjct: 105 INGVERFLFASSACVYPEFKQLETTVVRLREEDAWPAEPQDAYGWEKLATERL----CQH 160

Query: 169 F--------AILRSSIIYGPQT-----ISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECR 213
           +         I+R   IYGP+          P ++  +   +    G++ E + D  + R
Sbjct: 161 YNEDYGIETRIVRFHNIYGPRGTWDGGREKAPAAMCRK--VATAKDGDRFEIWGDGLQTR 218

Query: 214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP 273
              Y+ D V+ +  L      E       +N+G  + VS  ++AE+V    G    +I  
Sbjct: 219 SFTYIDDCVEGLRRLMESDFGEP------VNLGSDEMVSMNELAEMVLSFSGKPLEIIHH 272

Query: 274 VSASSVDRGVQSPADISMDITKLVQTLNIDPVT-YKDGVKLT 314
                  RG  S      D T L + L  +P T  ++G+++T
Sbjct: 273 TPGPQGVRGRNS------DNTLLKEELGWEPNTPLEEGLRIT 308

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 40/183 (21%), Positives = 63/183 (34%), Gaps = 33/183 (18%)

Query: 5   RVLVVGGTGYLGQHLLQGL--SEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
            VL+ G TG+LG +LL+ L   +   K Y +          + L+D L    +    +L+
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELE 60

Query: 63  SGSGFDAVALKFGQP----------------DVVVNCAALSVPRVCENDPDSAM-SINVP 105
             S    V     +P                DV+++  A     V    P   +   NV 
Sbjct: 61  L-SRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGA----NVNWVYPYEELKPANV- 114

Query: 106 SSLVNWLSSFTENKENLLIHLSTDQVYEGVKSF----YKEEDEIAP----VNVYGKSKVA 157
                 L      K   L  +ST  V+   +       + +D +       N Y +SK  
Sbjct: 115 LGTKELLKLAATGKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPNGYIQSKWV 174

Query: 158 AEK 160
           AEK
Sbjct: 175 AEK 177

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 58/268 (21%), Positives = 102/268 (38%), Gaps = 65/268 (24%)

Query: 7   LVVGGTGYLGQHLLQGLSEIEGKP----YDVAATHHSTPLPQLLLDALPHSFV-FFDVDL 61
           LV GG G+LG+H+++ L           +D+         P+LL D      + + + D+
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLR------FSPELLEDFSKLQVITYIEGDV 54

Query: 62  KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
                    AL+    DVV++ AA+ +    +   D+ M +NV  +  N L +  +    
Sbjct: 55  TDKQDLRR-ALQ--GSDVVIHTAAI-IDVFGKAYRDTIMKVNVKGTQ-NVLDACVKAGVR 109

Query: 122 LLIHLSTDQVYEGVKSFYKE------ED---EIAPVNVYGKSKVAAEKFIYE-------- 164
           +L++ S+ +V     + Y +      E    E    + Y +SK  AEK + +        
Sbjct: 110 VLVYTSSMEVVGP--NSYGQPIVNGDETTPYESTHQDPYPESKALAEKLVLKANGSTLKN 167

Query: 165 -----KCSNFAILRSSIIYGP--QTISPVPKSLPIQWIDSVLSKGEKVEF-----FHDEC 212
                 C+    LR + I+G     + P         +  + +   K          D  
Sbjct: 168 GGRLYTCA----LRPAGIFGEGDPFLFP-------FLVRLLKNGLAKFRTGDKNVLSD-- 214

Query: 213 RCPVYVRDVV-KIILALTNRWLSEDKQM 239
              VYV +V    ILA   R L + K+ 
Sbjct: 215 --RVYVGNVAWAHILAA--RALQDPKKA 238

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 39.9 bits (94), Expect = 8e-04
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 8/89 (8%)

Query: 2  SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFDV 59
            KRVL+ G +G +GQ L + L+    +   +    ++  L + L   LP+     +   
Sbjct: 4  KDKRVLLTGASGGIGQALAEALAAAGARL--LLVGRNAEKL-EALAARLPYPGRHRWVVA 60

Query: 60 DLKSGSGFDAV---ALKFGQPDVVVNCAA 85
          DL S +G +AV   A + G  +V++N A 
Sbjct: 61 DLTSEAGREAVLARAREMGGINVLINNAG 89

Length = 263

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 46/176 (26%)

Query: 2   SKKRVLVVGGTGYLGQHLLQGL------------SEIEGKPYDVAATHHSTPLPQLLLDA 49
           + K +L+ GGTG  G+  +  L            S  E K +++       P P L    
Sbjct: 3   NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF---PAPCL---- 55

Query: 50  LPHSFVFFDVDLKS--GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSS 107
               F   DV  K         V       D VV+ AAL      E +P   +  N+  +
Sbjct: 56  ---RFFIGDVRDKERLTRALRGV-------DYVVHAAALKQVPAAEYNPFECIRTNINGA 105

Query: 108 LVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK-FI 162
             N + +  +N    ++ LSTD+                P+N+YG +K+A++K F+
Sbjct: 106 Q-NVIDAAIDNGVKRVVALSTDKA-------------ANPINLYGATKLASDKLFV 147

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

>gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 38/161 (23%), Positives = 62/161 (38%), Gaps = 20/161 (12%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
           R+L+ GG G +G  L + L +  GK   +A+     P           S  F  +D+   
Sbjct: 1   RILITGGLGQIGSELAKLLRKRYGKDNVIASDIRKPPAHV------VLSGPFEYLDVLDF 54

Query: 65  SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
              + + +      ++   A LS   V E +P  A  +N+ + L N L    E+   + +
Sbjct: 55  KSLEEIVVNHKITWIIHLAALLSA--VGEKNPPLAWDVNM-NGLHNVLELAREHNLRIFV 111

Query: 125 HLSTDQVY------EGVKSFYKEEDEIAPVNVYGKSKVAAE 159
             ST   +              +     P  +YG SKVAAE
Sbjct: 112 P-STIGAFGPTTPRNNTPDDTIQR----PRTIYGVSKVAAE 147

This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	320
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	100.0
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PLN02778	298	3,5-epimerase/4-reductase	100.0
PRK05865	854	hypothetical protein; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PLN02583	297	cinnamoyl-CoA reductase	100.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	100.0
PLN02996	491	fatty acyl-CoA reductase	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	100.0
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	100.0
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.98
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.97
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.97
PLN02503	605	fatty acyl-CoA reductase 2	99.96
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.96
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.96
PRK12320	699	hypothetical protein; Provisional	99.96
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.95
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.95
PRK06482	276	short chain dehydrogenase; Provisional	99.94
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.94
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.94
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.93
PRK08263	275	short chain dehydrogenase; Provisional	99.93
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.92
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.92
PRK09135	249	pteridine reductase; Provisional	99.92
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.91
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.91
PRK05875	276	short chain dehydrogenase; Provisional	99.91
PLN03209	576	translocon at the inner envelope of chloroplast su	99.91
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.91
PRK06180	277	short chain dehydrogenase; Provisional	99.91
PRK06138	252	short chain dehydrogenase; Provisional	99.9
PRK06914	280	short chain dehydrogenase; Provisional	99.9
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK07774	250	short chain dehydrogenase; Provisional	99.9
PRK07775	274	short chain dehydrogenase; Provisional	99.9
PRK12829	264	short chain dehydrogenase; Provisional	99.9
PRK07067	257	sorbitol dehydrogenase; Provisional	99.9
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.89
PRK07074	257	short chain dehydrogenase; Provisional	99.89
PRK12746	254	short chain dehydrogenase; Provisional	99.89
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK07806	248	short chain dehydrogenase; Provisional	99.89
PRK09186	256	flagellin modification protein A; Provisional	99.89
PRK07890	258	short chain dehydrogenase; Provisional	99.89
PRK12828	239	short chain dehydrogenase; Provisional	99.89
PRK07060	245	short chain dehydrogenase; Provisional	99.89
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.88
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.88
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.88
PRK12827	249	short chain dehydrogenase; Provisional	99.88
PRK06128	300	oxidoreductase; Provisional	99.88
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK06500	249	short chain dehydrogenase; Provisional	99.88
PRK06194	287	hypothetical protein; Provisional	99.88
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK05876	275	short chain dehydrogenase; Provisional	99.87
PRK05717	255	oxidoreductase; Validated	99.87
PRK06182	273	short chain dehydrogenase; Validated	99.87
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.87
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.87
PLN02253	280	xanthoxin dehydrogenase	99.86
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.86
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.86
PRK12939	250	short chain dehydrogenase; Provisional	99.86
KOG2774	366	consensus NAD dependent epimerase [General functio	99.86
PRK06181	263	short chain dehydrogenase; Provisional	99.86
PRK08264	238	short chain dehydrogenase; Validated	99.86
PRK08219	227	short chain dehydrogenase; Provisional	99.85
PRK06179	270	short chain dehydrogenase; Provisional	99.85
PRK08628	258	short chain dehydrogenase; Provisional	99.85
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.85
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK06123	248	short chain dehydrogenase; Provisional	99.85
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.85
PRK09134	258	short chain dehydrogenase; Provisional	99.85
PRK06701	290	short chain dehydrogenase; Provisional	99.85
PRK06841	255	short chain dehydrogenase; Provisional	99.85
PRK07326	237	short chain dehydrogenase; Provisional	99.85
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.84
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.84
PRK07814	263	short chain dehydrogenase; Provisional	99.84
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.84
PRK10538	248	malonic semialdehyde reductase; Provisional	99.84
PRK07825	273	short chain dehydrogenase; Provisional	99.84
PRK06523	260	short chain dehydrogenase; Provisional	99.84
PRK06196	315	oxidoreductase; Provisional	99.84
PRK07985	294	oxidoreductase; Provisional	99.84
PRK07856	252	short chain dehydrogenase; Provisional	99.84
PRK07041	230	short chain dehydrogenase; Provisional	99.84
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK08324	681	short chain dehydrogenase; Validated	99.84
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.84
PRK07577	234	short chain dehydrogenase; Provisional	99.84
PRK07454	241	short chain dehydrogenase; Provisional	99.83
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.83
PRK08265	261	short chain dehydrogenase; Provisional	99.83
PRK07024	257	short chain dehydrogenase; Provisional	99.83
PRK08017	256	oxidoreductase; Provisional	99.83
PRK07063	260	short chain dehydrogenase; Provisional	99.83
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK05650	270	short chain dehydrogenase; Provisional	99.83
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.83
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.83
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK05993	277	short chain dehydrogenase; Provisional	99.83
PRK08643	256	acetoin reductase; Validated	99.83
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.83
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK12937	245	short chain dehydrogenase; Provisional	99.83
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.83
PRK06057	255	short chain dehydrogenase; Provisional	99.83
PRK08267	260	short chain dehydrogenase; Provisional	99.82
PRK07035	252	short chain dehydrogenase; Provisional	99.82
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.82
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.82
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.82
PRK12747	252	short chain dehydrogenase; Provisional	99.82
PRK07478	254	short chain dehydrogenase; Provisional	99.82
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK09242	257	tropinone reductase; Provisional	99.82
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.82
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.82
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK12742	237	oxidoreductase; Provisional	99.81
PRK06197	306	short chain dehydrogenase; Provisional	99.81
PRK06398	258	aldose dehydrogenase; Validated	99.81
PRK06198	260	short chain dehydrogenase; Provisional	99.81
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.81
PRK12744	257	short chain dehydrogenase; Provisional	99.81
PRK08589	272	short chain dehydrogenase; Validated	99.81
PRK08339	263	short chain dehydrogenase; Provisional	99.81
PRK12743	256	oxidoreductase; Provisional	99.81
PRK06172	253	short chain dehydrogenase; Provisional	99.81
PRK07109	334	short chain dehydrogenase; Provisional	99.81
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.81
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.8
PRK06949	258	short chain dehydrogenase; Provisional	99.8
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.8
PRK07069	251	short chain dehydrogenase; Validated	99.8
PRK07102	243	short chain dehydrogenase; Provisional	99.8
PRK06483	236	dihydromonapterin reductase; Provisional	99.8
PRK06114	254	short chain dehydrogenase; Provisional	99.8
PRK07677	252	short chain dehydrogenase; Provisional	99.8
PRK06101	240	short chain dehydrogenase; Provisional	99.8
PRK09291	257	short chain dehydrogenase; Provisional	99.79
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.79
PRK08226	263	short chain dehydrogenase; Provisional	99.79
PRK05867	253	short chain dehydrogenase; Provisional	99.79
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.79
PRK07576	264	short chain dehydrogenase; Provisional	99.79
PRK08251	248	short chain dehydrogenase; Provisional	99.79
PRK05866	293	short chain dehydrogenase; Provisional	99.79
PRK05854	313	short chain dehydrogenase; Provisional	99.79
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.79
PRK07904	253	short chain dehydrogenase; Provisional	99.79
PRK05693	274	short chain dehydrogenase; Provisional	99.78
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.78
PRK09072	263	short chain dehydrogenase; Provisional	99.78
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.78
PRK05872	296	short chain dehydrogenase; Provisional	99.78
PRK06484	520	short chain dehydrogenase; Validated	99.78
PRK06924	251	short chain dehydrogenase; Provisional	99.78
PRK06139	330	short chain dehydrogenase; Provisional	99.78
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.77
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.77
PRK07023	243	short chain dehydrogenase; Provisional	99.77
PRK08278	273	short chain dehydrogenase; Provisional	99.77
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.76
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.76
PRK07062	265	short chain dehydrogenase; Provisional	99.76
PRK07831	262	short chain dehydrogenase; Provisional	99.76
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.76
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK06125	259	short chain dehydrogenase; Provisional	99.75
PRK08703	239	short chain dehydrogenase; Provisional	99.75
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.75
PRK07832	272	short chain dehydrogenase; Provisional	99.74
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.73
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.73
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.73
PRK07791	286	short chain dehydrogenase; Provisional	99.73
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.72
PRK06953	222	short chain dehydrogenase; Provisional	99.72
PRK08177	225	short chain dehydrogenase; Provisional	99.72
PRK06940	275	short chain dehydrogenase; Provisional	99.72
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
PRK07201	657	short chain dehydrogenase; Provisional	99.71
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.71
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK05855	582	short chain dehydrogenase; Validated	99.7
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.7
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.69
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.69
PRK06484	520	short chain dehydrogenase; Validated	99.69
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
PRK07578	199	short chain dehydrogenase; Provisional	99.68
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
PLN02780	320	ketoreductase/ oxidoreductase	99.68
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.67
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.67
PRK05884	223	short chain dehydrogenase; Provisional	99.67
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.66
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.66
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.66
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.65
PRK12367	245	short chain dehydrogenase; Provisional	99.64
COG2910	211	Putative NADH-flavin reductase [General function p	99.64
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.64
PRK05599	246	hypothetical protein; Provisional	99.63
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.6
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.59
PRK08303	305	short chain dehydrogenase; Provisional	99.59
PRK08862	227	short chain dehydrogenase; Provisional	99.58
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.57
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.57
PLN00015	308	protochlorophyllide reductase	99.56
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.54
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.54
KOG1208	314	consensus Dehydrogenases with different specificit	99.5
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.49
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.49
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.49
KOG0725	270	consensus Reductases with broad range of substrate	99.46
COG1028	251	FabG Dehydrogenases with different specificities (	99.45
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.44
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.44
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.43
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.41
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.39
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.36
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.35
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.31
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.26
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.25
PRK06720	169	hypothetical protein; Provisional	99.22
PRK08309	177	short chain dehydrogenase; Provisional	99.17
PTZ00325	321	malate dehydrogenase; Provisional	99.14
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.14
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.13
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	99.08
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.03
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.93
PLN00106	323	malate dehydrogenase	98.93
PRK09620	229	hypothetical protein; Provisional	98.89
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.79
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.7
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.61
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.55
PRK14982	340	acyl-ACP reductase; Provisional	98.48
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.47
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.47
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.47
PRK05086	312	malate dehydrogenase; Provisional	98.42
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.41
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.38
COG3268	382	Uncharacterized conserved protein [Function unknow	98.27
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.25
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.24
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.24
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	98.2
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.15
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	98.12
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	98.11
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.06
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	98.05
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	98.03
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.01
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.98
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.97
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.96
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.87
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.76
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.75
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.7
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.66
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.63
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.63
PRK04148	134	hypothetical protein; Provisional	97.62
PLN02383	344	aspartate semialdehyde dehydrogenase	97.57
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	97.55
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.46
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.45
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.44
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.43
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.4
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.36
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	97.33
PRK09496	453	trkA potassium transporter peripheral membrane com	97.29
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.28
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.28
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.26
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.24
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.24
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.23
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.19
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.19
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	97.19
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.16
PRK09496	453	trkA potassium transporter peripheral membrane com	97.15
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	97.15
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.12
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.12
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.12
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.1
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.1
COG2130	340	Putative NADP-dependent oxidoreductases [General f	97.1
PRK05442	326	malate dehydrogenase; Provisional	97.09
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.06
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	97.06
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.06
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.05
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.03
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.01
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.99
PRK06223	307	malate dehydrogenase; Reviewed	96.99
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.98
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.98
PLN02602	350	lactate dehydrogenase	96.97
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.96
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.93
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.92
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.89
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.89
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.87
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.87
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.83
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.82
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.82
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	96.8
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.79
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.78
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.78
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.78
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.76
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.75
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.74
PTZ00117	319	malate dehydrogenase; Provisional	96.73
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.71
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.71
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.67
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.67
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.66
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.64
COG4982	866	3-oxoacyl-[acyl-carrier protein]	96.6
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.6
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.58
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.57
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.56
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.54
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.54
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.54
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.54
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.53
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.51
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.47
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.47
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.4
PF10100	429	DUF2338: Uncharacterized protein conserved in bact	96.38
PRK08655	437	prephenate dehydrogenase; Provisional	96.36
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.34
PRK08300	302	acetaldehyde dehydrogenase; Validated	96.33
PRK08591	451	acetyl-CoA carboxylase biotin carboxylase subunit;	96.33
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.32
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.31
PRK06849	389	hypothetical protein; Provisional	96.31
PLN00203	519	glutamyl-tRNA reductase	96.31
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.3
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	96.3
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.29
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.28
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.28
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.27
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.27
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.24
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.23
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.21
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.21
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.2
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.2
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.19
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	96.17
PRK06901	322	aspartate-semialdehyde dehydrogenase; Provisional	96.17
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.15
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.15
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.1
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.09
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.09
PRK13303	265	L-aspartate dehydrogenase; Provisional	96.08
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.03
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.0
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	95.99
PRK08328	231	hypothetical protein; Provisional	95.96
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	95.96
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	95.95
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.95
PRK13304	265	L-aspartate dehydrogenase; Reviewed	95.93
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	95.93
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.92
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.9
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	95.9
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.89
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.88
PRK08462	445	biotin carboxylase; Validated	95.88
TIGR00877	423	purD phosphoribosylamine--glycine ligase. This enz	95.82
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	95.82
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.82
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.82
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.81
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.8
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.78
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	95.76
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.73
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.73
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	95.68
PRK13243	333	glyoxylate reductase; Reviewed	95.68
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.67
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.67
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.67
PRK10669	558	putative cation:proton antiport protein; Provision	95.66
PRK07877	722	hypothetical protein; Provisional	95.64
PRK13301	267	putative L-aspartate dehydrogenase; Provisional	95.63
TIGR00514	449	accC acetyl-CoA carboxylase, biotin carboxylase su	95.63
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.62
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	95.61
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.6
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.59
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	95.56
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.53
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.52
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	95.51
PLN02928	347	oxidoreductase family protein	95.5
PRK06111	450	acetyl-CoA carboxylase biotin carboxylase subunit;	95.49
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	95.48
TIGR01369	1050	CPSaseII_lrg carbamoyl-phosphate synthase, large s	95.47
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	95.47
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.47
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	95.45
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	95.44
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	95.41
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.37
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.37
PRK05294	1066	carB carbamoyl phosphate synthase large subunit; R	95.36

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3e-55  Score=354.20  Aligned_cols=301  Identities=24%  Similarity=0.276  Sum_probs=257.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+||||||+||||||.+.+|++.|   ++|+.++.-...........  ..+++++|+.|.+.+++++++. ++|.|||+
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G---~~vvV~DNL~~g~~~~v~~~--~~~f~~gDi~D~~~L~~vf~~~-~idaViHF   74 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTG---HEVVVLDNLSNGHKIALLKL--QFKFYEGDLLDRALLTAVFEEN-KIDAVVHF   74 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCC---CeEEEEecCCCCCHHHhhhc--cCceEEeccccHHHHHHHHHhc-CCCEEEEC
Confidence            589999999999999999999999   78887777544433322211  1578999999999999999885 99999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFI  162 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~e~~~  162 (320)
                      ||......+.++|..+++.|+.+|+ +|+++|++.++++|||.||+++||.... |++|+.+..|.+|||.||++.|+++
T Consensus        75 Aa~~~VgESv~~Pl~Yy~NNv~gTl-~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL  153 (329)
T COG1087          75 AASISVGESVQNPLKYYDNNVVGTL-NLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEIL  153 (329)
T ss_pred             ccccccchhhhCHHHHHhhchHhHH-HHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHH
Confidence            9999999999999999999999997 9999999999999999999999997766 9999999999999999999999999


Q ss_pred             HHH----cCCeeEEeecccccCCCC------CCCCCCChHHHHHHHHhcCCceEeecC--------cccCceeHHHHHHH
Q 020880          163 YEK----CSNFAILRSSIIYGPQTI------SPVPKSLPIQWIDSVLSKGEKVEFFHD--------ECRCPVYVRDVVKI  224 (320)
Q Consensus       163 ~~~----~~~~~ilR~~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~v~D~a~~  224 (320)
                      +.+    +.++++||.+++.|....      ......+++..++.++.+...+.++|+        ..||||||.|+|++
T Consensus       154 ~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~a  233 (329)
T COG1087         154 RDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADA  233 (329)
T ss_pred             HHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHH
Confidence            876    457899999999997643      222344555566666766777888874        37999999999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP  304 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~  304 (320)
                      ++++++....++.  ..+||+++|..+|+.|+++.+.+..|.+.+..      ..++++.++..+..|.+|++++|||+|
T Consensus       234 H~~Al~~L~~~g~--~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~------~~~RR~GDpa~l~Ad~~kA~~~Lgw~p  305 (329)
T COG1087         234 HVLALKYLKEGGS--NNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVE------IAPRRAGDPAILVADSSKARQILGWQP  305 (329)
T ss_pred             HHHHHHHHHhCCc--eeEEEccCCCceeHHHHHHHHHHHhCCcCcee------eCCCCCCCCceeEeCHHHHHHHhCCCc
Confidence            9999998765432  36999999999999999999999999765543      245677788899999999999999999


Q ss_pred             -c-CHHHHHHHHHhhhc
Q 020880          305 -V-TYKDGVKLTLAAEA  319 (320)
Q Consensus       305 -~-~~~~~l~~~i~~~~  319 (320)
                       + ++++.++....|..
T Consensus       306 ~~~~L~~ii~~aw~W~~  322 (329)
T COG1087         306 TYDDLEDIIKDAWDWHQ  322 (329)
T ss_pred             ccCCHHHHHHHHHHHhh
Confidence             6 99999999999965

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.5e-51  Score=331.07  Aligned_cols=299  Identities=23%  Similarity=0.307  Sum_probs=251.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-C-ChhhhhhhC-CCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-P-LPQLLLDAL-PHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-~-~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |++|||||.||||++++++++++... .+|+.++.-. . ..+.+.... .++..|+++|+.|.+.+.++++.+ ++|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-~~D~V   78 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-QPDAV   78 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-CCCeE
Confidence            57999999999999999999998765 5566555421 1 111111111 257899999999999999999875 89999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeechhhhcccCC---CCcccCCCCCcchHHHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTDQVYEGVKS---FYKEEDEIAPVNVYGKSKV  156 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~---~~~E~~~~~p~~~Y~~sK~  156 (320)
                      +|+|+.++.+.+-.+|+...++|+.||. ++|+++++...+ ||+|+||-.|||+-..   .++|.+|.+|.+||+.||+
T Consensus        79 vhfAAESHVDRSI~~P~~Fi~TNv~GT~-~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKA  157 (340)
T COG1088          79 VHFAAESHVDRSIDGPAPFIQTNVVGTY-TLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKA  157 (340)
T ss_pred             EEechhccccccccChhhhhhcchHHHH-HHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhh
Confidence            9999999999999999999999999996 999999998854 9999999999996543   6899999999999999999


Q ss_pred             HHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHh
Q 020880          157 AAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTN  230 (320)
Q Consensus       157 ~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~  230 (320)
                      .++.+++.+    +.+++|.|+++-|||.+.   +..+++..+.+++ .|+++++.|+  +.|||+||+|-|+++..+++
T Consensus       158 asD~lVray~~TYglp~~ItrcSNNYGPyqf---pEKlIP~~I~nal-~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~  233 (340)
T COG1088         158 ASDLLVRAYVRTYGLPATITRCSNNYGPYQF---PEKLIPLMIINAL-LGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLT  233 (340)
T ss_pred             hHHHHHHHHHHHcCCceEEecCCCCcCCCcC---chhhhHHHHHHHH-cCCCCceecCCcceeeeEEeHhHHHHHHHHHh
Confidence            999988775    789999999999999985   5566666666665 6999999987  58999999999999999999


Q ss_pred             hhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCc----cccCCccccCCCCCCCCccccChHHHHhhcCCCc-c
Q 020880          231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSL----IKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-V  305 (320)
Q Consensus       231 ~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~  305 (320)
                      +...     +++||++++...+-.|+++.|++.+++..+.    +..     ...++.-...+.+|.+|++++|||+| +
T Consensus       234 kg~~-----GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~-----V~DRpGHD~RYaid~~Ki~~eLgW~P~~  303 (340)
T COG1088         234 KGKI-----GETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITF-----VEDRPGHDRRYAIDASKIKRELGWRPQE  303 (340)
T ss_pred             cCcC-----CceEEeCCCccchHHHHHHHHHHHhCccccchhhheEe-----ccCCCCCccceeechHHHhhhcCCCcCC
Confidence            8544     5599999999999999999999999987662    222     22333334568899999999999999 9


Q ss_pred             CHHHHHHHHHhhhc
Q 020880          306 TYKDGVKLTLAAEA  319 (320)
Q Consensus       306 ~~~~~l~~~i~~~~  319 (320)
                      +++++|+++++|..
T Consensus       304 ~fe~GlrkTv~WY~  317 (340)
T COG1088         304 TFETGLRKTVDWYL  317 (340)
T ss_pred             CHHHHHHHHHHHHH
Confidence            99999999999974

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1.2e-50  Score=355.78  Aligned_cols=309  Identities=22%  Similarity=0.192  Sum_probs=239.4

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh----hC----CCcceEEEeeCCCcccHHHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD----AL----PHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~----~~----~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      |.+|+|||||||||||++|+++|+++|   ++|++++|..........    ..    ..+++++.+|++|.+.+.++++
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g---~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~   89 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLN---QTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK   89 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence            457899999999999999999999999   889999886543221111    10    1357789999999988888877


Q ss_pred             HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-CCCcccCCCCCcchH
Q 020880           73 KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVY  151 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-~~~~E~~~~~p~~~Y  151 (320)
                         ++|+|||+|+......+..+|...+++|+.++. +++++|++.++++|||+||.++||... .+..|+++..|.++|
T Consensus        90 ---~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~-nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y  165 (348)
T PRK15181         90 ---NVDYVLHQAALGSVPRSLKDPIATNSANIDGFL-NMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPY  165 (348)
T ss_pred             ---CCCEEEECccccCchhhhhCHHHHHHHHHHHHH-HHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChh
Confidence               799999999987665566678889999999996 999999999999999999999999644 467788888899999


Q ss_pred             HHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCC-CCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHH
Q 020880          152 GKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPV-PKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKI  224 (320)
Q Consensus       152 ~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~  224 (320)
                      +.+|.++|.+++.+    +.+++++||+++|||++.... ...++..++.+++ .+.++.+.|+  +.++|+|++|+|++
T Consensus       166 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~-~~~~i~~~g~g~~~rd~i~v~D~a~a  244 (348)
T PRK15181        166 AVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLL-KDEPIYINGDGSTSRDFCYIENVIQA  244 (348)
T ss_pred             hHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHH-cCCCcEEeCCCCceEeeEEHHHHHHH
Confidence            99999999987754    578999999999999864321 2234556665555 5667777764  58999999999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP  304 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~  304 (320)
                      +++++.....  ...+++||+++++.+|++|+++.+.+.++.........................+|++|++++|||+|
T Consensus       245 ~~~~~~~~~~--~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~P  322 (348)
T PRK15181        245 NLLSATTNDL--ASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEP  322 (348)
T ss_pred             HHHHHhcccc--cCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHHhCCCC
Confidence            9987764211  11246999999999999999999999987432100000000011122234457799999999999999


Q ss_pred             -cCHHHHHHHHHhhhc
Q 020880          305 -VTYKDGVKLTLAAEA  319 (320)
Q Consensus       305 -~~~~~~l~~~i~~~~  319 (320)
                       ++++|+|+++++|++
T Consensus       323 ~~sl~egl~~~~~w~~  338 (348)
T PRK15181        323 EFDIKEGLKQTLKWYI  338 (348)
T ss_pred             CCCHHHHHHHHHHHHH
Confidence             899999999999975

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=1.5e-46  Score=329.85  Aligned_cols=305  Identities=17%  Similarity=0.077  Sum_probs=231.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh--hhhh---hhC----CCcceEEEeeCCCcccHHHHHHHh
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP--QLLL---DAL----PHSFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~--~~~~---~~~----~~~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      |+|||||||||||++|+++|+++|   ++|+++.|+++..  ..+.   ...    ..+++++.+|++|.+.+.++++..
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKG---YEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCC---CEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC
Confidence            589999999999999999999999   8999999876421  1111   111    235788999999999999988854


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc---eEEEeechhhhcccC-CCCcccCCCCCcch
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN---LLIHLSTDQVYEGVK-SFYKEEDEIAPVNV  150 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~---~~v~~Ss~~vy~~~~-~~~~E~~~~~p~~~  150 (320)
                       ++|+|||||+..+...+..++...+++|+.++. +++++|++.+++   +|||+||.++||... .+++|+++..|.++
T Consensus        78 -~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~-~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~  155 (343)
T TIGR01472        78 -KPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTL-RLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSP  155 (343)
T ss_pred             -CCCEEEECCcccccchhhhChHHHHHHHHHHHH-HHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCCh
Confidence             689999999987654444566777889999996 999999988763   899999999999654 37899999999999


Q ss_pred             HHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCC-ceEeec--CcccCceeHHHHHH
Q 020880          151 YGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGE-KVEFFH--DECRCPVYVRDVVK  223 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~i~v~D~a~  223 (320)
                      |+.||..+|.+++.+    +.++++.|+.++|||+.........+..++..+. .+. ...+.|  ++.++|+|++|+|+
T Consensus       156 Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~g~~~rd~i~V~D~a~  234 (343)
T TIGR01472       156 YAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIK-LGLQEKLYLGNLDAKRDWGHAKDYVE  234 (343)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHH-cCCCCceeeCCCccccCceeHHHHHH
Confidence            999999999988765    4567889999999997432111122223343333 344 333444  46899999999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccc---------------cCCccccCCCCCCCCc
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIK---------------PVSASSVDRGVQSPAD  288 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~  288 (320)
                      +++.+++++.      .++||+++++.+|++|+++.+.+.+|.+..+..               ................
T Consensus       235 a~~~~~~~~~------~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (343)
T TIGR01472       235 AMWLMLQQDK------PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDL  308 (343)
T ss_pred             HHHHHHhcCC------CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccch
Confidence            9999987632      238999999999999999999999996532100               0000001112223445


Q ss_pred             cccChHHHHhhcCCCc-cCHHHHHHHHHhhhcC
Q 020880          289 ISMDITKLVQTLNIDP-VTYKDGVKLTLAAEAT  320 (320)
Q Consensus       289 ~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~~  320 (320)
                      ..+|++|++++|||+| ++++|+|++++++|++
T Consensus       309 ~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~  341 (343)
T TIGR01472       309 LLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE  341 (343)
T ss_pred             hcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence            6789999999999999 8999999999998863

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=8.5e-47  Score=321.18  Aligned_cols=284  Identities=38%  Similarity=0.661  Sum_probs=223.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      ||||||||+|+||++|++.|.++|   ++|++..|+                  ..|++|.+.+.++++.. ++|+||||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~---~~v~~~~r~------------------~~dl~d~~~~~~~~~~~-~pd~Vin~   58 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERG---YEVIATSRS------------------DLDLTDPEAVAKLLEAF-KPDVVINC   58 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTS---EEEEEESTT------------------CS-TTSHHHHHHHHHHH---SEEEE-
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCC---CEEEEeCch------------------hcCCCCHHHHHHHHHHh-CCCeEecc
Confidence            789999999999999999999999   899988776                  56899999999998876 89999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFI  162 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~e~~~  162 (320)
                      ||...++.++.+|+..+.+|+.++. +++++|.+.++ ++||+||.+||++... +++|+++++|.+.||++|.++|+.+
T Consensus        59 aa~~~~~~ce~~p~~a~~iN~~~~~-~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v  136 (286)
T PF04321_consen   59 AAYTNVDACEKNPEEAYAINVDATK-NLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAV  136 (286)
T ss_dssp             -----HHHHHHSHHHHHHHHTHHHH-HHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHH
T ss_pred             ceeecHHhhhhChhhhHHHhhHHHH-HHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHH
Confidence            9999889999999999999999995 99999999998 9999999999987644 7999999999999999999999999


Q ss_pred             HHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCce
Q 020880          163 YEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL  242 (320)
Q Consensus       163 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  242 (320)
                      ++...++.|+|++.+||+..     . .+..++...+.+++.+.++.+..++++|++|+|+++..++++...+ ...+++
T Consensus       137 ~~~~~~~~IlR~~~~~g~~~-----~-~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~-~~~~Gi  209 (286)
T PF04321_consen  137 RAACPNALILRTSWVYGPSG-----R-NFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSG-ASPWGI  209 (286)
T ss_dssp             HHH-SSEEEEEE-SEESSSS-----S-SHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH--GGG-EE
T ss_pred             HHhcCCEEEEecceecccCC-----C-chhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccc-ccccee
Confidence            99888999999999999943     2 2345666667789999999999999999999999999999997653 234669


Q ss_pred             eEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCccCHHHHHHHHHhhh
Q 020880          243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAE  318 (320)
Q Consensus       243 ~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~i~~~  318 (320)
                      ||+++++.+|+.|+++.+++.+|.+...+.+.+.........++.+..+|++|+++.||+++.+++++|+++++.+
T Consensus       210 yh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~~~~~~~~~l~~~~~~~  285 (286)
T PF04321_consen  210 YHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGIKPPPWREGLEELVKQY  285 (286)
T ss_dssp             EE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHCTTS---BHHHHHHHHHHHH
T ss_pred             EEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHccCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999998866667766666666778889999999999999999999999999998754

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=3.1e-46  Score=332.68  Aligned_cols=305  Identities=22%  Similarity=0.310  Sum_probs=225.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhh----CCCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDA----LPHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      .|+|||||||||||++|+++|+++ |   ++|++++|+.++...+...    ...+++++.+|++|.+.+.++++   ++
T Consensus        14 ~~~VlVTGgtGfIGs~lv~~L~~~~g---~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~---~~   87 (386)
T PLN02427         14 PLTICMIGAGGFIGSHLCEKLMTETP---HKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK---MA   87 (386)
T ss_pred             CcEEEEECCcchHHHHHHHHHHhcCC---CEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh---cC
Confidence            478999999999999999999998 5   7899898876554433221    12468899999999998888877   79


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCC-----------
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEI-----------  145 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~-----------  145 (320)
                      |+|||||+...+.....++...+..|+.+++ +++++|++.+ ++|||+||.++||.... +++|+.+.           
T Consensus        88 d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~-~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e  165 (386)
T PLN02427         88 DLTINLAAICTPADYNTRPLDTIYSNFIDAL-PVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKE  165 (386)
T ss_pred             CEEEEcccccChhhhhhChHHHHHHHHHHHH-HHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccc
Confidence            9999999986554444566677788999996 9999998887 79999999999996422 33333221           


Q ss_pred             -----------CCcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCC--------CCCChHHHHHHHHhcC
Q 020880          146 -----------APVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPV--------PKSLPIQWIDSVLSKG  202 (320)
Q Consensus       146 -----------~p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~  202 (320)
                                 +|.+.|+.+|.++|++++.+    +.+++++||++||||+.....        ...++..++..+. ++
T Consensus       166 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~  244 (386)
T PLN02427        166 DESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL-RR  244 (386)
T ss_pred             cccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHh-cC
Confidence                       24468999999999998764    568999999999999853110        0112222333333 57


Q ss_pred             CceEeecC--cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCC-CCcCHHHHHHHHHHHhCCCCCcc------cc
Q 020880          203 EKVEFFHD--ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP-DRVSRVQMAEVVAEIRGYSTSLI------KP  273 (320)
Q Consensus       203 ~~~~~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~-~~~s~~e~~~~i~~~~~~~~~~~------~~  273 (320)
                      .++.+.++  +.++|||++|+|++++.+++++..   ..+++||++++ +.+|++|+++.+.+.+|......      ..
T Consensus       245 ~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~---~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~  321 (386)
T PLN02427        245 EPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPAR---ANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVD  321 (386)
T ss_pred             CCeEEECCCCceECcEeHHHHHHHHHHHHhCccc---ccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccc
Confidence            77777764  578999999999999999987421   12459999987 58999999999999988521100      01


Q ss_pred             CCcc-ccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          274 VSAS-SVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       274 ~~~~-~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      .+.. ..............|++|++++|||+| ++++++|+++++|++
T Consensus       322 ~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~  369 (386)
T PLN02427        322 VSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQH  369 (386)
T ss_pred             cCcccccCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHH
Confidence            1110 011111234556789999999999999 999999999999975

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=6.5e-46  Score=326.41  Aligned_cols=308  Identities=20%  Similarity=0.195  Sum_probs=236.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh--CCCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA--LPHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      |++|+|||||||||||+++++.|+++|   ++|+++.|++.........  ....+.++.+|++|.+++.++++.. ++|
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d   77 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELG---AEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-KPE   77 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCC---CEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-CCC
Confidence            457899999999999999999999999   8899998886654322211  1235777899999999999988864 689


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-CceEEEeechhhhcccC--CCCcccCCCCCcchHHHHH
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-ENLLIHLSTDQVYEGVK--SFYKEEDEIAPVNVYGKSK  155 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~~~v~~Ss~~vy~~~~--~~~~E~~~~~p~~~Y~~sK  155 (320)
                      +|||+|+......+..++...+++|+.+++ ++++++++.+ ++++|++||..+|+...  .+++|+++..|.++|+.+|
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~-~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK  156 (349)
T TIGR02622        78 IVFHLAAQPLVRKSYADPLETFETNVMGTV-NLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSK  156 (349)
T ss_pred             EEEECCcccccccchhCHHHHHHHhHHHHH-HHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHH
Confidence            999999976555555678889999999996 9999998876 78999999999998643  3688988888999999999


Q ss_pred             HHHHHHHHHH-----------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEee-cCcccCceeHHHHHH
Q 020880          156 VAAEKFIYEK-----------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFF-HDECRCPVYVRDVVK  223 (320)
Q Consensus       156 ~~~e~~~~~~-----------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~  223 (320)
                      ..+|.+++.+           +.+++++||+++|||++..  ...++..++..+. .+.++.+. |++.++|+|++|+|+
T Consensus       157 ~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~--~~~~~~~~~~~~~-~g~~~~~~~g~~~rd~i~v~D~a~  233 (349)
T TIGR02622       157 ACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA--EDRLIPDVIRAFS-SNKIVIIRNPDATRPWQHVLEPLS  233 (349)
T ss_pred             HHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch--hhhhhHHHHHHHh-cCCCeEECCCCcccceeeHHHHHH
Confidence            9999988764           5678999999999997521  1233444554444 56666664 357999999999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCC--CCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcC
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGP--DRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN  301 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~--~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg  301 (320)
                      +++.++++........+++||++++  +.+|+.|+++.+.+.++.....+...+   ............+|++|++++||
T Consensus       234 a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~k~~~~lg  310 (349)
T TIGR02622       234 GYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDS---DLNHPHEARLLKLDSSKARTLLG  310 (349)
T ss_pred             HHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeecc---CCCCCcccceeecCHHHHHHHhC
Confidence            9998887632211112459999975  689999999999987764221111111   01112233456789999999999


Q ss_pred             CCc-cCHHHHHHHHHhhhc
Q 020880          302 IDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       302 ~~~-~~~~~~l~~~i~~~~  319 (320)
                      |+| ++++++|+++++|++
T Consensus       311 w~p~~~l~~gi~~~i~w~~  329 (349)
T TIGR02622       311 WHPRWGLEEAVSRTVDWYK  329 (349)
T ss_pred             CCCCCCHHHHHHHHHHHHH
Confidence            999 899999999999986

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=4.9e-46  Score=327.07  Aligned_cols=304  Identities=19%  Similarity=0.297  Sum_probs=229.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCC-CcccHHHHHHHhCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK-SGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~~~~d~V   80 (320)
                      ||+|||||||||||++|+++|+++ |   ++|+++.|+......+..  ...++++.+|++ +.+.+.++++   ++|+|
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~---~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~---~~d~V   72 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTD---WEVYGMDMQTDRLGDLVN--HPRMHFFEGDITINKEWIEYHVK---KCDVI   72 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCC---CeEEEEeCcHHHHHHhcc--CCCeEEEeCCCCCCHHHHHHHHc---CCCEE
Confidence            478999999999999999999986 6   889999887543332222  235888999998 6666666665   89999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCC-------CCcchHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEI-------APVNVYG  152 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~-------~p~~~Y~  152 (320)
                      ||||+...+.....+|+..+++|+.+++ +++++|++.+ +++||+||..+||.... +++|++++       +|.+.|+
T Consensus        73 iH~aa~~~~~~~~~~p~~~~~~n~~~~~-~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~  150 (347)
T PRK11908         73 LPLVAIATPATYVKQPLRVFELDFEANL-PIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYA  150 (347)
T ss_pred             EECcccCChHHhhcCcHHHHHHHHHHHH-HHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHH
Confidence            9999987665556788899999999996 9999999988 69999999999996433 56666531       4677899


Q ss_pred             HHHHHHHHHHHHH----cCCeeEEeecccccCCCCCC-----CCCCChHHHHHHHHhcCCceEeec--CcccCceeHHHH
Q 020880          153 KSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISP-----VPKSLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRDV  221 (320)
Q Consensus       153 ~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~  221 (320)
                      .+|..+|++++.+    +.+++++||+++|||+....     ....++..++..+. .+.++.+.+  ++.++|||++|+
T Consensus       151 ~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~g~~~r~~i~v~D~  229 (347)
T PRK11908        151 CSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIV-RGEPISLVDGGSQKRAFTDIDDG  229 (347)
T ss_pred             HHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHh-CCCceEEecCCceeeccccHHHH
Confidence            9999999988764    56899999999999986421     11234445555544 567777765  468999999999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCC-CCcCHHHHHHHHHHHhCCCCCccc--------cCCccc-cCCCCCCCCcccc
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGP-DRVSRVQMAEVVAEIRGYSTSLIK--------PVSASS-VDRGVQSPADISM  291 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~-~~~s~~e~~~~i~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~  291 (320)
                      +++++.+++++..  ...+++||++++ ..+|++|+++.|.+.++..+.+..        ..+... ..........+..
T Consensus       230 a~a~~~~~~~~~~--~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (347)
T PRK11908        230 IDALMKIIENKDG--VASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVP  307 (347)
T ss_pred             HHHHHHHHhCccc--cCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccC
Confidence            9999999987421  122459999987 479999999999999986443210        001000 0001112234567


Q ss_pred             ChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          292 DITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       292 d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      |++|++++|||+| ++++++++++++|++
T Consensus       308 d~~k~~~~lGw~p~~~l~~~l~~~~~~~~  336 (347)
T PRK11908        308 KIDNTMQELGWAPKTTMDDALRRIFEAYR  336 (347)
T ss_pred             ChHHHHHHcCCCCCCcHHHHHHHHHHHHH
Confidence            8999999999999 899999999999975

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=1.5e-45  Score=325.23  Aligned_cols=303  Identities=21%  Similarity=0.309  Sum_probs=229.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEE-EecCCCCCh--hhhhhh-CCCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVA-ATHHSTPLP--QLLLDA-LPHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~-~~~r~~~~~--~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      ||+|||||||||||+++++.|+++|   ++++ ...|.....  ..+... ....+.++.+|++|.+++.++++.. ++|
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~D   76 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINET---SDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-QPD   76 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcC---CCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-CCC
Confidence            5799999999999999999999999   5544 334432211  111111 1235778899999999998888753 699


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhh---------ccCceEEEeechhhhccc---CCCCcccCCCC
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE---------NKENLLIHLSTDQVYEGV---KSFYKEEDEIA  146 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~---------~~~~~~v~~Ss~~vy~~~---~~~~~E~~~~~  146 (320)
                      +||||||......+..+++..+++|+.++. +++++|.+         .+++++|++||.++||..   ..+++|+++..
T Consensus        77 ~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~-~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~  155 (355)
T PRK10217         77 CVMHLAAESHVDRSIDGPAAFIETNIVGTY-TLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYA  155 (355)
T ss_pred             EEEECCcccCcchhhhChHHHHHHhhHHHH-HHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCC
Confidence            999999987554445567889999999996 99999976         356799999999999853   23689999988


Q ss_pred             CcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRD  220 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D  220 (320)
                      |.+.|+.||..+|.+++.+    +.+++++||+++|||++.   +..++..++.... .+.++.++++  +.++|+|++|
T Consensus       156 p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~---~~~~~~~~~~~~~-~~~~~~~~g~g~~~~~~i~v~D  231 (355)
T PRK10217        156 PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHF---PEKLIPLMILNAL-AGKPLPVYGNGQQIRDWLYVED  231 (355)
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCC---cccHHHHHHHHHh-cCCCceEeCCCCeeeCcCcHHH
Confidence            9999999999999988654    568999999999999863   2233444444444 5666666654  5899999999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCcccc-C---C--ccccCCCCCCCCccccChH
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-V---S--ASSVDRGVQSPADISMDIT  294 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~-~---~--~~~~~~~~~~~~~~~~d~~  294 (320)
                      +|++++.+++...     .+++||+++++.+|++|+++.+.+.++...+.... .   .  .............+.+|++
T Consensus       232 ~a~a~~~~~~~~~-----~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  306 (355)
T PRK10217        232 HARALYCVATTGK-----VGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDAS  306 (355)
T ss_pred             HHHHHHHHHhcCC-----CCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHH
Confidence            9999999988632     24599999999999999999999998853321100 0   0  0001111122345678999


Q ss_pred             HHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          295 KLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       295 k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      |++++|||+| ++++|+|+++++|++
T Consensus       307 k~~~~lg~~p~~~l~e~l~~~~~~~~  332 (355)
T PRK10217        307 KIARELGWLPQETFESGMRKTVQWYL  332 (355)
T ss_pred             HHHHhcCCCCcCcHHHHHHHHHHHHH
Confidence            9999999999 899999999999986

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=8.8e-46  Score=318.17  Aligned_cols=283  Identities=23%  Similarity=0.331  Sum_probs=226.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      ||||||||+||||++|+++|+++|    +|+++.|...              .+.+|++|.+.+.++++.. ++|+||||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g----~V~~~~~~~~--------------~~~~Dl~d~~~~~~~~~~~-~~D~Vih~   61 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG----NLIALDVHST--------------DYCGDFSNPEGVAETVRKI-RPDVIVNA   61 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC----CEEEeccccc--------------cccCCCCCHHHHHHHHHhc-CCCEEEEC
Confidence            479999999999999999999998    3667777521              2568999999998888753 79999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFI  162 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~e~~~  162 (320)
                      |+...++.++.+|+..+++|+.++. +++++|++.++ ++||+||.+||+.... |++|+++.+|.++|+.+|..+|+++
T Consensus        62 Aa~~~~~~~~~~~~~~~~~N~~~~~-~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~  139 (299)
T PRK09987         62 AAHTAVDKAESEPEFAQLLNATSVE-AIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKAL  139 (299)
T ss_pred             CccCCcchhhcCHHHHHHHHHHHHH-HHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHH
Confidence            9998777777788888999999996 99999999997 8999999999987644 8999999999999999999999999


Q ss_pred             HHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCc----ccCceeHHHHHHHHHHHHhhhhccccc
Q 020880          163 YEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDE----CRCPVYVRDVVKIILALTNRWLSEDKQ  238 (320)
Q Consensus       163 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~v~D~a~~~~~~~~~~~~~~~~  238 (320)
                      +.+..+++++|++++|||+..     .++..++ ..+.++.++.+++++    .+.+.+++|+++++..++....     
T Consensus       140 ~~~~~~~~ilR~~~vyGp~~~-----~~~~~~~-~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~-----  208 (299)
T PRK09987        140 QEHCAKHLIFRTSWVYAGKGN-----NFAKTML-RLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPE-----  208 (299)
T ss_pred             HHhCCCEEEEecceecCCCCC-----CHHHHHH-HHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCC-----
Confidence            999889999999999999752     2333344 344467788887763    3455667778888877765421     


Q ss_pred             cCceeEecCCCCcCHHHHHHHHHHHhC---CCCC--ccccCCccccCCCCCCCCccccChHHHHhhcCCCccCHHHHHHH
Q 020880          239 MQLLLNVGGPDRVSRVQMAEVVAEIRG---YSTS--LIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKL  313 (320)
Q Consensus       239 ~~~~~n~~~~~~~s~~e~~~~i~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~~~~~~~l~~  313 (320)
                      .+++||+++++.+|+.|+++.|.+.++   .+.+  .+.+.+....+....++.+..+|++|+++.|||+|.+|+++|++
T Consensus       209 ~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~~~~~~~~~l~~  288 (299)
T PRK09987        209 VAGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKR  288 (299)
T ss_pred             CCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHHhCCCCccHHHHHHH
Confidence            134999999999999999999988654   2321  12233333333445577888999999999999999999999999


Q ss_pred             HHhhh
Q 020880          314 TLAAE  318 (320)
Q Consensus       314 ~i~~~  318 (320)
                      +++.+
T Consensus       289 ~~~~~  293 (299)
T PRK09987        289 MLTEL  293 (299)
T ss_pred             HHHHH
Confidence            98754

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=2.4e-45  Score=328.05  Aligned_cols=290  Identities=22%  Similarity=0.304  Sum_probs=226.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh-hhhhhC-CCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-LLLDAL-PHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~-~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      .|||||||||||||++|+++|+++|   ++|++++|...... ...... ...++++.+|+.+..     +.   ++|+|
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G---~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~~---~~D~V  188 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRG---DEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----LL---EVDQI  188 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----cc---CCCEE
Confidence            3789999999999999999999999   88998887533211 111111 135677888887642     33   79999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccC-----CCCCcchHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEED-----EIAPVNVYGKS  154 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~-----~~~p~~~Y~~s  154 (320)
                      ||||+...+..+..++...++.|+.++. +++++|++.++ ++||+||.+|||.... +.+|+.     |..|.+.|+.+
T Consensus       189 iHlAa~~~~~~~~~~p~~~~~~Nv~gT~-nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~S  266 (436)
T PLN02166        189 YHLACPASPVHYKYNPVKTIKTNVMGTL-NMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEG  266 (436)
T ss_pred             EECceeccchhhccCHHHHHHHHHHHHH-HHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHH
Confidence            9999987665555678899999999996 99999999886 8999999999996543 677763     66678899999


Q ss_pred             HHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHH
Q 020880          155 KVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       155 K~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~  228 (320)
                      |..+|++++.+    +.+++++||+++|||++... ...++..++..++ .+.++.++|+  +.++|||++|+|++++.+
T Consensus       267 K~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~-~~~~i~~~i~~~l-~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~  344 (436)
T PLN02166        267 KRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLD-DGRVVSNFVAQTI-RKQPMTVYGDGKQTRSFQYVSDLVDGLVAL  344 (436)
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCC-ccchHHHHHHHHh-cCCCcEEeCCCCeEEeeEEHHHHHHHHHHH
Confidence            99999988765    56899999999999986321 2234445666555 5667777765  589999999999999999


Q ss_pred             HhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCH
Q 020880          229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTY  307 (320)
Q Consensus       229 ~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~  307 (320)
                      ++...      .++||+++++.+|+.|+++.+.+.+|.+..+. ..+     ..........+|++|++++|||+| +++
T Consensus       345 ~~~~~------~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~-~~p-----~~~~~~~~~~~d~~Ka~~~LGw~P~~sl  412 (436)
T PLN02166        345 MEGEH------VGPFNLGNPGEFTMLELAEVVKETIDSSATIE-FKP-----NTADDPHKRKPDISKAKELLNWEPKISL  412 (436)
T ss_pred             HhcCC------CceEEeCCCCcEeHHHHHHHHHHHhCCCCCee-eCC-----CCCCCccccccCHHHHHHHcCCCCCCCH
Confidence            87531      34899999999999999999999998765432 111     112234556889999999999999 899


Q ss_pred             HHHHHHHHhhhc
Q 020880          308 KDGVKLTLAAEA  319 (320)
Q Consensus       308 ~~~l~~~i~~~~  319 (320)
                      +++|+++++|++
T Consensus       413 ~egl~~~i~~~~  424 (436)
T PLN02166        413 REGLPLMVSDFR  424 (436)
T ss_pred             HHHHHHHHHHHH
Confidence            999999999986

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=7.9e-45  Score=318.64  Aligned_cols=304  Identities=16%  Similarity=0.097  Sum_probs=232.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-----hhhhhh---hCCCcceEEEeeCCCcccHHHHHHH
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-----PQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-----~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~   73 (320)
                      ++|+|||||||||||++|+++|+++|   ++|+++.|+++.     ...+..   ..+..++++.+|++|.+++.++++.
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKG---YEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCC---CEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            36899999999999999999999999   899998887542     111110   0123578899999999999998886


Q ss_pred             hCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-----eEEEeechhhhcccCCCCcccCCCCCc
Q 020880           74 FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-----LLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-----~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      + ++|+|||||+..+...+..++...+++|+.++. +++++|.+.+++     +||++||.++||....+++|+++..|.
T Consensus        82 ~-~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~-~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~  159 (340)
T PLN02653         82 I-KPDEVYNLAAQSHVAVSFEMPDYTADVVATGAL-RLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPR  159 (340)
T ss_pred             c-CCCEEEECCcccchhhhhhChhHHHHHHHHHHH-HHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCC
Confidence            5 689999999987655455567788899999996 999999988875     899999999999776689999999999


Q ss_pred             chHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEe-ec--CcccCceeHHHH
Q 020880          149 NVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEF-FH--DECRCPVYVRDV  221 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~  221 (320)
                      ++|+.||.++|.+++.+    +.+++..|+.++|||+.........+..++.. +..+.+..+ .|  ++.++|+|++|+
T Consensus       160 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~g~~~rd~i~v~D~  238 (340)
T PLN02653        160 SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGR-IKVGLQKKLFLGNLDASRDWGFAGDY  238 (340)
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHH-HHcCCCCceEeCCCcceecceeHHHH
Confidence            99999999999988765    34567889999999975322111122222333 334554433 34  468999999999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcC
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN  301 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg  301 (320)
                      |++++.++++..      .+.||+++++.+|+.|+++.+.+.+|.+.........  ............+|++|++++||
T Consensus       239 a~a~~~~~~~~~------~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~d~~k~~~~lg  310 (340)
T PLN02653        239 VEAMWLMLQQEK------PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDP--RYFRPAEVDNLKGDASKAREVLG  310 (340)
T ss_pred             HHHHHHHHhcCC------CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCc--ccCCccccccccCCHHHHHHHhC
Confidence            999999998632      2489999999999999999999999864211001110  11112233456789999999999


Q ss_pred             CCc-cCHHHHHHHHHhhhc
Q 020880          302 IDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       302 ~~~-~~~~~~l~~~i~~~~  319 (320)
                      |+| ++++|+|+++++|++
T Consensus       311 w~p~~~l~~gi~~~~~~~~  329 (340)
T PLN02653        311 WKPKVGFEQLVKMMVDEDL  329 (340)
T ss_pred             CCCCCCHHHHHHHHHHHHH
Confidence            999 899999999999875

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=1.5e-44  Score=318.76  Aligned_cols=294  Identities=22%  Similarity=0.247  Sum_probs=227.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|+|||||||||||++|++.|+++|   ++|+++.|......   .......+++.+|++|.+.+..++.   ++|+|||
T Consensus        21 ~~~IlVtGgtGfIG~~l~~~L~~~G---~~V~~v~r~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~---~~D~Vih   91 (370)
T PLN02695         21 KLRICITGAGGFIASHIARRLKAEG---HYIIASDWKKNEHM---SEDMFCHEFHLVDLRVMENCLKVTK---GVDHVFN   91 (370)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhCC---CEEEEEEecccccc---ccccccceEEECCCCCHHHHHHHHh---CCCEEEE
Confidence            5899999999999999999999999   88999988643211   1111124678899999887777665   8999999


Q ss_pred             CCCccCcc-ccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-----CCcccC--CCCCcchHHHH
Q 020880           83 CAALSVPR-VCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-----FYKEED--EIAPVNVYGKS  154 (320)
Q Consensus        83 ~a~~~~~~-~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-----~~~E~~--~~~p~~~Y~~s  154 (320)
                      +|+...+. ....++...+..|+.++. +++++|++.++++|||+||.++|+....     +++|++  +..|.++|+.+
T Consensus        92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~-nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~s  170 (370)
T PLN02695         92 LAADMGGMGFIQSNHSVIMYNNTMISF-NMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLE  170 (370)
T ss_pred             cccccCCccccccCchhhHHHHHHHHH-HHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHH
Confidence            99875431 122345566788999995 9999999999999999999999996532     466665  67889999999


Q ss_pred             HHHHHHHHHHH----cCCeeEEeecccccCCCCCCC-CCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHH
Q 020880          155 KVAAEKFIYEK----CSNFAILRSSIIYGPQTISPV-PKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILA  227 (320)
Q Consensus       155 K~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~  227 (320)
                      |..+|++++.+    +.+++++||+++|||+..... ....+..++..++..+.++.++++  +.++|+|++|+++++++
T Consensus       171 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~  250 (370)
T PLN02695        171 KLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLR  250 (370)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHH
Confidence            99999987664    668999999999999764221 223344566666655577777764  58999999999999999


Q ss_pred             HHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cC
Q 020880          228 LTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VT  306 (320)
Q Consensus       228 ~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~  306 (320)
                      ++++..      .++||+++++.+|++|+++.+.+..|.+.++. ..+..      .......+|++|++++|||+| ++
T Consensus       251 ~~~~~~------~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~-~~~~~------~~~~~~~~d~sk~~~~lgw~p~~~  317 (370)
T PLN02695        251 LTKSDF------REPVNIGSDEMVSMNEMAEIALSFENKKLPIK-HIPGP------EGVRGRNSDNTLIKEKLGWAPTMR  317 (370)
T ss_pred             HHhccC------CCceEecCCCceeHHHHHHHHHHHhCCCCCce-ecCCC------CCccccccCHHHHHHhcCCCCCCC
Confidence            877631      34899999999999999999999998755432 11111      111234589999999999999 89


Q ss_pred             HHHHHHHHHhhhc
Q 020880          307 YKDGVKLTLAAEA  319 (320)
Q Consensus       307 ~~~~l~~~i~~~~  319 (320)
                      ++++|+++++|++
T Consensus       318 l~e~i~~~~~~~~  330 (370)
T PLN02695        318 LKDGLRITYFWIK  330 (370)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999986

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=3.2e-44  Score=316.54  Aligned_cols=308  Identities=18%  Similarity=0.225  Sum_probs=233.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh----hhhh---hCCCcceEEEeeCCCcccHHHHHHHh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ----LLLD---ALPHSFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~----~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      ++|+|+|||||||||++|+++|+++|   ++|++++|......    ....   ....++.++.+|++|++.+.++++..
T Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          4 MGRTILVTGGAGYIGSHTVLQLLLAG---YKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            45799999999999999999999999   88988887543221    1111   11245788999999999998888754


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhccc-CCCCcccCCCCCcchHHH
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGK  153 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~-~~~~~E~~~~~p~~~Y~~  153 (320)
                       ++|+|||+|+.........++...++.|+.++. +++++|++.++++||++||+++|+.. ..+++|+++..|.+.|+.
T Consensus        81 -~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~  158 (352)
T PLN02240         81 -RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTI-NLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGR  158 (352)
T ss_pred             -CCCEEEEccccCCccccccCHHHHHHHHHHHHH-HHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHH
Confidence             799999999976444344577888999999996 99999999998899999999999854 347999999999999999


Q ss_pred             HHHHHHHHHHHH-----cCCeeEEeecccccCCCCCCC---C---CCChHHHHHHHHhcC-CceEeec--------Cccc
Q 020880          154 SKVAAEKFIYEK-----CSNFAILRSSIIYGPQTISPV---P---KSLPIQWIDSVLSKG-EKVEFFH--------DECR  213 (320)
Q Consensus       154 sK~~~e~~~~~~-----~~~~~ilR~~~v~G~~~~~~~---~---~~~~~~~~~~~~~~~-~~~~~~~--------~~~~  213 (320)
                      +|..+|++++.+     +.+.+++|++++||++.....   +   ...+..++..+...+ ..+.+.|        .+.+
T Consensus       159 sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  238 (352)
T PLN02240        159 TKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVR  238 (352)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEE
Confidence            999999998764     235688999999998642110   1   111223344433222 2444433        4579


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccCh
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDI  293 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  293 (320)
                      +|||++|+|++++.++++....+...+++||+++++.+|++|+++.+.+.++.+.++.. .+     ........+.+|+
T Consensus       239 ~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~-~~-----~~~~~~~~~~~d~  312 (352)
T PLN02240        239 DYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKL-AP-----RRPGDAEEVYAST  312 (352)
T ss_pred             eeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCcee-CC-----CCCCChhhhhcCH
Confidence            99999999999999987642222233569999999999999999999999997654431 11     1112234456799


Q ss_pred             HHHHhhcCCCc-cCHHHHHHHHHhhhcC
Q 020880          294 TKLVQTLNIDP-VTYKDGVKLTLAAEAT  320 (320)
Q Consensus       294 ~k~~~~lg~~~-~~~~~~l~~~i~~~~~  320 (320)
                      +|++++|||+| ++++++|+++++|++.
T Consensus       313 ~k~~~~lg~~p~~~l~~~l~~~~~~~~~  340 (352)
T PLN02240        313 EKAEKELGWKAKYGIDEMCRDQWNWASK  340 (352)
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence            99999999999 7999999999999863

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=1.5e-44  Score=324.54  Aligned_cols=305  Identities=20%  Similarity=0.183  Sum_probs=223.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC---CCCh--------------hhh---hhhCCCcceEEEeeC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS---TPLP--------------QLL---LDALPHSFVFFDVDL   61 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~---~~~~--------------~~~---~~~~~~~~~~~~~Dl   61 (320)
                      ++|+|||||||||||++|+++|+++|   ++|++++|.   ....              ..+   ......+++++.+|+
T Consensus        46 ~~k~VLVTGatGfIGs~Lv~~L~~~G---~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl  122 (442)
T PLN02572         46 KKKKVMVIGGDGYCGWATALHLSKRG---YEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI  122 (442)
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence            36899999999999999999999999   788886542   1110              000   001123578899999


Q ss_pred             CCcccHHHHHHHhCCCCEEEECCCccCccccccCc---hhhhhccccccHHHHHhhhhhccCc-eEEEeechhhhcccCC
Q 020880           62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDP---DSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTDQVYEGVKS  137 (320)
Q Consensus        62 ~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~---~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~  137 (320)
                      +|.+.+.++++.. ++|+|||+|+......+..++   +..+++|+.+++ +++++|++.+++ +||++||.++||....
T Consensus       123 ~d~~~v~~~l~~~-~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~-nlleaa~~~gv~~~~V~~SS~~vYG~~~~  200 (442)
T PLN02572        123 CDFEFLSEAFKSF-EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTL-NVLFAIKEFAPDCHLVKLGTMGEYGTPNI  200 (442)
T ss_pred             CCHHHHHHHHHhC-CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHH-HHHHHHHHhCCCccEEEEecceecCCCCC
Confidence            9999999888864 799999999875544333333   455789999996 999999999885 8999999999996433


Q ss_pred             CCcc-----------c---CCCCCcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCC--C----------
Q 020880          138 FYKE-----------E---DEIAPVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPV--P----------  187 (320)
Q Consensus       138 ~~~E-----------~---~~~~p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~--~----------  187 (320)
                      +++|           +   .+..|.++|+.+|.++|.+++.+    +.+++++||++||||++....  +          
T Consensus       201 ~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~  280 (442)
T PLN02572        201 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDG  280 (442)
T ss_pred             CCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCccc
Confidence            3332           2   25678889999999999988665    668899999999999864210  0          


Q ss_pred             --CCChHHHHHHHHhcCCceEeec--CcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHH
Q 020880          188 --KSLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEI  263 (320)
Q Consensus       188 --~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~  263 (320)
                        ...+..++..+. .++++.++|  ++.|+|+||+|+|++++.++++....+  .+.+||+++ +.+|+.|+++.+.+.
T Consensus       281 ~~~~~i~~~~~~~~-~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g--~~~i~Nigs-~~~si~el~~~i~~~  356 (442)
T PLN02572        281 VFGTALNRFCVQAA-VGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPG--EFRVFNQFT-EQFSVNELAKLVTKA  356 (442)
T ss_pred             chhhHHHHHHHHHh-cCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcC--ceeEEEeCC-CceeHHHHHHHHHHH
Confidence              122333444433 567777765  468999999999999999998642211  134899976 679999999999999


Q ss_pred             ---hCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-c---CHHHHHHHHHhhhcC
Q 020880          264 ---RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-V---TYKDGVKLTLAAEAT  320 (320)
Q Consensus       264 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~---~~~~~l~~~i~~~~~  320 (320)
                         +|.+..+. ..+..   ...........|++|+++ |||+| +   ++.++|.+++.|+++
T Consensus       357 ~~~~g~~~~~~-~~p~~---~~~~~~~~~~~d~~k~~~-LGw~p~~~~~~l~~~l~~~~~~~~~  415 (442)
T PLN02572        357 GEKLGLDVEVI-SVPNP---RVEAEEHYYNAKHTKLCE-LGLEPHLLSDSLLDSLLNFAVKYKD  415 (442)
T ss_pred             HHhhCCCCCee-eCCCC---cccccccccCccHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHh
Confidence               77654332 12211   112233456789999975 99999 7   899999999999863

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=2.7e-44  Score=338.74  Aligned_cols=303  Identities=19%  Similarity=0.286  Sum_probs=231.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCccc-HHHHHHHhCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG-FDAVALKFGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~~~~d~V   80 (320)
                      +|+|||||||||||++|+++|+++ |   ++|++++|.+.....+..  ..+++++.+|++|.+. +.++++   ++|+|
T Consensus       315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g---~~V~~l~r~~~~~~~~~~--~~~~~~~~gDl~d~~~~l~~~l~---~~D~V  386 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRDDN---YEVYGLDIGSDAISRFLG--HPRFHFVEGDISIHSEWIEYHIK---KCDVV  386 (660)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC---cEEEEEeCCchhhhhhcC--CCceEEEeccccCcHHHHHHHhc---CCCEE
Confidence            689999999999999999999985 7   899999997654332222  1357889999999765 455555   89999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-CCCcccCCC-------CCcchHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-SFYKEEDEI-------APVNVYG  152 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-~~~~E~~~~-------~p~~~Y~  152 (320)
                      |||||...+..+..++...+++|+.++. +++++|++.+ ++|||+||.++||... .+++|+++.       .|.+.|+
T Consensus       387 iHlAa~~~~~~~~~~~~~~~~~Nv~~t~-~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg  464 (660)
T PRK08125        387 LPLVAIATPIEYTRNPLRVFELDFEENL-KIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYS  464 (660)
T ss_pred             EECccccCchhhccCHHHHHHhhHHHHH-HHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchH
Confidence            9999987765556678889999999996 9999999988 7999999999999644 368888642       3556899


Q ss_pred             HHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCC-----CCCChHHHHHHHHhcCCceEeecC--cccCceeHHHH
Q 020880          153 KSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPV-----PKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDV  221 (320)
Q Consensus       153 ~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~  221 (320)
                      .+|.++|++++.+    +.+++++||+++|||++....     ....+..++..+. .+.++.+.|+  +.++|||++|+
T Consensus       465 ~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~-~~~~i~~~g~g~~~rd~i~v~Dv  543 (660)
T PRK08125        465 VSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLV-EGSPIKLVDGGKQKRCFTDIRDG  543 (660)
T ss_pred             HHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhc-CCCCeEEeCCCceeeceeeHHHH
Confidence            9999999988764    568999999999999864211     1233445555444 5677777654  68999999999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCCC-CcCHHHHHHHHHHHhCCCCCccccCCccc-c---------CCCCCCCCccc
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGPD-RVSRVQMAEVVAEIRGYSTSLIKPVSASS-V---------DRGVQSPADIS  290 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~  290 (320)
                      |++++.++++...  ...+++||+++++ .+|++|+++.+.+.+|.+.... ..+... .         ...........
T Consensus       544 a~a~~~~l~~~~~--~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  620 (660)
T PRK08125        544 IEALFRIIENKDN--RCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRD-HFPPFAGFRVVESSSYYGKGYQDVEHRK  620 (660)
T ss_pred             HHHHHHHHhcccc--ccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccc-cCCccccccccccccccccccccccccC
Confidence            9999999986421  1235599999985 7999999999999998643211 111100 0         00111334556


Q ss_pred             cChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          291 MDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       291 ~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      +|++|++++|||+| ++++|+|+++++|++
T Consensus       621 ~d~~ka~~~LGw~P~~~lee~l~~~i~~~~  650 (660)
T PRK08125        621 PSIRNARRLLDWEPKIDMQETIDETLDFFL  650 (660)
T ss_pred             CChHHHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence            89999999999999 899999999999986

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=4.5e-44  Score=320.42  Aligned_cols=290  Identities=22%  Similarity=0.276  Sum_probs=223.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh-hhhhhhC-CCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP-QLLLDAL-PHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~-~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      .|||||||||||||++|+++|+++|   ++|++++|..... ....... ..+++++.+|+.++.     +.   ++|+|
T Consensus       119 ~~kILVTGatGfIGs~Lv~~Ll~~G---~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l~---~~D~V  187 (442)
T PLN02206        119 GLRVVVTGGAGFVGSHLVDRLMARG---DSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----LL---EVDQI  187 (442)
T ss_pred             CCEEEEECcccHHHHHHHHHHHHCc---CEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----hc---CCCEE
Confidence            4799999999999999999999999   7888887653221 1111111 235677888887642     33   79999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccC-----CCCCcchHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEED-----EIAPVNVYGKS  154 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~-----~~~p~~~Y~~s  154 (320)
                      ||||+...+.....++...+++|+.++. +++++|++.++ ++||+||.++|+.... +.+|+.     |..+.+.|+.+
T Consensus       188 iHlAa~~~~~~~~~~p~~~~~~Nv~gt~-nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~S  265 (442)
T PLN02206        188 YHLACPASPVHYKFNPVKTIKTNVVGTL-NMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEG  265 (442)
T ss_pred             EEeeeecchhhhhcCHHHHHHHHHHHHH-HHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHH
Confidence            9999987665555678899999999996 99999999987 8999999999986543 666763     45567889999


Q ss_pred             HHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHH
Q 020880          155 KVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       155 K~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~  228 (320)
                      |.++|+++..+    +.+++++||+++|||+.... ...++..++..++ .+.++.++++  +.++|+|++|+|++++.+
T Consensus       266 K~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~-~~~~v~~~i~~~l-~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a  343 (442)
T PLN02206        266 KRTAETLTMDYHRGANVEVRIARIFNTYGPRMCID-DGRVVSNFVAQAL-RKEPLTVYGDGKQTRSFQFVSDLVEGLMRL  343 (442)
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-ccchHHHHHHHHH-cCCCcEEeCCCCEEEeEEeHHHHHHHHHHH
Confidence            99999988654    57899999999999985311 1233445555555 4666777665  589999999999999999


Q ss_pred             HhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCH
Q 020880          229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTY  307 (320)
Q Consensus       229 ~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~  307 (320)
                      +++..      .++||+++++.+|++|+++.+.+.++.+..+. ..+.     .........+|++|++++|||+| +++
T Consensus       344 ~e~~~------~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~-~~p~-----~~~~~~~~~~d~sKa~~~LGw~P~~~l  411 (442)
T PLN02206        344 MEGEH------VGPFNLGNPGEFTMLELAKVVQETIDPNAKIE-FRPN-----TEDDPHKRKPDITKAKELLGWEPKVSL  411 (442)
T ss_pred             HhcCC------CceEEEcCCCceeHHHHHHHHHHHhCCCCcee-eCCC-----CCCCccccccCHHHHHHHcCCCCCCCH
Confidence            87531      34899999999999999999999998654432 1111     11223456789999999999999 899


Q ss_pred             HHHHHHHHhhhc
Q 020880          308 KDGVKLTLAAEA  319 (320)
Q Consensus       308 ~~~l~~~i~~~~  319 (320)
                      +|+|+++++|++
T Consensus       412 ~egl~~~~~~~~  423 (442)
T PLN02206        412 RQGLPLMVKDFR  423 (442)
T ss_pred             HHHHHHHHHHHH
Confidence            999999999985

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=7.7e-44  Score=314.02  Aligned_cols=303  Identities=20%  Similarity=0.300  Sum_probs=227.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC--ChhhhhhhC-CCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP--LPQLLLDAL-PHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~--~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |||||||||||||++|+++|+++|+  ..|++..+...  ......... +..++++.+|++|.+++.++++.. ++|+|
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~v   77 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQ--DSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQH-QPDAV   77 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCC--CeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhc-CCCEE
Confidence            4799999999999999999999994  23554444321  111111111 234677899999999999988753 79999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhc---------cCceEEEeechhhhcccC-----------CCCc
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN---------KENLLIHLSTDQVYEGVK-----------SFYK  140 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~---------~~~~~v~~Ss~~vy~~~~-----------~~~~  140 (320)
                      ||+|+.........+++..+++|+.++. +++++|++.         +++++||+||.++|+...           .+++
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~N~~gt~-~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~  156 (352)
T PRK10084         78 MHLAAESHVDRSITGPAAFIETNIVGTY-VLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFT  156 (352)
T ss_pred             EECCcccCCcchhcCchhhhhhhhHHHH-HHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcc
Confidence            9999986544444567889999999996 999999864         466999999999998531           2478


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec--CcccC
Q 020880          141 EEDEIAPVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH--DECRC  214 (320)
Q Consensus       141 E~~~~~p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  214 (320)
                      |+++..|.+.|+.+|..+|.+++.+    +.+++++|+++||||+..   ...++..++..+. .+.++.+++  ++.++
T Consensus       157 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~---~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~  232 (352)
T PRK10084        157 ETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHF---PEKLIPLVILNAL-EGKPLPIYGKGDQIRD  232 (352)
T ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcC---ccchHHHHHHHHh-cCCCeEEeCCCCeEEe
Confidence            8999999999999999999988654    568899999999999863   2234444554444 466666665  46899


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCc--cccCCCCCCCCccccC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSA--SSVDRGVQSPADISMD  292 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d  292 (320)
                      |||++|+|++++.++++..     .+++||+++++.+|++|+++.+.+.++...+...+...  ............+.+|
T Consensus       233 ~v~v~D~a~a~~~~l~~~~-----~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~d  307 (352)
T PRK10084        233 WLYVEDHARALYKVVTEGK-----AGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHDRRYAID  307 (352)
T ss_pred             eEEHHHHHHHHHHHHhcCC-----CCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhccccccCCCCCceeeeC
Confidence            9999999999999987632     24599999999999999999999999864321101000  0011111223456789


Q ss_pred             hHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          293 ITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       293 ~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      ++|++++|||+| ++++++|+++++|++
T Consensus       308 ~~k~~~~lg~~p~~~l~~~l~~~~~~~~  335 (352)
T PRK10084        308 ASKISRELGWKPQETFESGIRKTVEWYL  335 (352)
T ss_pred             HHHHHHHcCCCCcCCHHHHHHHHHHHHH
Confidence            999999999999 899999999999976

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=9.8e-44  Score=291.56  Aligned_cols=278  Identities=27%  Similarity=0.438  Sum_probs=248.0

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEECC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCA   84 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a   84 (320)
                      +|||||++|++|++|++.|. .+   ++|+.+.|.                  ..|++|++.+.+++.+. +||+|||+|
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~---~~v~a~~~~------------------~~Ditd~~~v~~~i~~~-~PDvVIn~A   58 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GE---FEVIATDRA------------------ELDITDPDAVLEVIRET-RPDVVINAA   58 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CC---ceEEeccCc------------------cccccChHHHHHHHHhh-CCCEEEECc
Confidence            49999999999999999999 55   899988887                  37999999999999876 899999999


Q ss_pred             CccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-CCCcccCCCCCcchHHHHHHHHHHHHH
Q 020880           85 ALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIY  163 (320)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-~~~~E~~~~~p~~~Y~~sK~~~e~~~~  163 (320)
                      ++...+.++.+++..+.+|..++. +++++|++.|. ++||+||-+||++.. .++.|+++++|.+.||+||++.|..++
T Consensus        59 Ayt~vD~aE~~~e~A~~vNa~~~~-~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~  136 (281)
T COG1091          59 AYTAVDKAESEPELAFAVNATGAE-NLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVR  136 (281)
T ss_pred             cccccccccCCHHHHHHhHHHHHH-HHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHH
Confidence            999999999999999999999995 99999999999 999999999998777 589999999999999999999999999


Q ss_pred             HHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCcee
Q 020880          164 EKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL  243 (320)
Q Consensus       164 ~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~  243 (320)
                      +++.+..|+|.+++||....      .+...|.+....++++.+..++..+++++.|+|+++..++......     ++|
T Consensus       137 ~~~~~~~I~Rtswv~g~~g~------nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~-----~~y  205 (281)
T COG1091         137 AAGPRHLILRTSWVYGEYGN------NFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEG-----GVY  205 (281)
T ss_pred             HhCCCEEEEEeeeeecCCCC------CHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccC-----cEE
Confidence            99999999999999998752      2334566777889999999999999999999999999999874333     399


Q ss_pred             EecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCccCHHHHHHHHHhhh
Q 020880          244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAE  318 (320)
Q Consensus       244 n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~i~~~  318 (320)
                      |+++....|+.|+++.|.+.++.+.....+......+....++.+..+|+.|+++.+|+++.+|+++++++++..
T Consensus       206 H~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~~w~~~l~~~~~~~  280 (281)
T COG1091         206 HLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLPEWREALKALLDEL  280 (281)
T ss_pred             EEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCCCCccHHHHHHHHHhhc
Confidence            999999899999999999999987755545555555666778889999999999999999999999999998764

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=3.3e-43  Score=307.62  Aligned_cols=289  Identities=19%  Similarity=0.197  Sum_probs=218.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhh-hhhhC---CCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDAL---PHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~-~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      +|+|||||||||||++|+++|+++|   ++|++++|+.+.... ....+   ...++++.+|++|.+++.++++   ++|
T Consensus        10 ~~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d   83 (342)
T PLN02214         10 GKTVCVTGAGGYIASWIVKILLERG---YTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID---GCD   83 (342)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh---cCC
Confidence            6799999999999999999999999   899999997654211 11111   2357788999999999888887   899


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech-hhhcccC----CCCcccC------CCCC
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD-QVYEGVK----SFYKEED------EIAP  147 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~-~vy~~~~----~~~~E~~------~~~p  147 (320)
                      +|||+|+...     .++...++.|+.++. +++++|++.++++|||+||. ++||...    .+++|++      +.+|
T Consensus        84 ~Vih~A~~~~-----~~~~~~~~~nv~gt~-~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p  157 (342)
T PLN02214         84 GVFHTASPVT-----DDPEQMVEPAVNGAK-FVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNT  157 (342)
T ss_pred             EEEEecCCCC-----CCHHHHHHHHHHHHH-HHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhcccc
Confidence            9999998642     357788999999996 99999999999999999996 5887432    2478875      3457


Q ss_pred             cchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK  223 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  223 (320)
                      .++|+.+|..+|++++.+    +.+++++||++||||+...... .....++ ..+ .+... ..+++.++|||++|+|+
T Consensus       158 ~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~-~~~~~~~-~~~-~g~~~-~~~~~~~~~i~V~Dva~  233 (342)
T PLN02214        158 KNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTIN-ASLYHVL-KYL-TGSAK-TYANLTQAYVDVRDVAL  233 (342)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCC-chHHHHH-HHH-cCCcc-cCCCCCcCeeEHHHHHH
Confidence            789999999999988765    5789999999999998642211 1122222 223 23333 24567889999999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCC
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID  303 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~  303 (320)
                      +++.+++++..     ++.||+++ ..++++|+++.+.+.++.. .+    +...............+|++|++ +|||+
T Consensus       234 a~~~al~~~~~-----~g~yn~~~-~~~~~~el~~~i~~~~~~~-~~----~~~~~~~~~~~~~~~~~d~~k~~-~LG~~  301 (342)
T PLN02214        234 AHVLVYEAPSA-----SGRYLLAE-SARHRGEVVEILAKLFPEY-PL----PTKCKDEKNPRAKPYKFTNQKIK-DLGLE  301 (342)
T ss_pred             HHHHHHhCccc-----CCcEEEec-CCCCHHHHHHHHHHHCCCC-CC----CCCCccccCCCCCccccCcHHHH-HcCCc
Confidence            99999987432     23799987 5789999999999998631 11    11001111222344568999997 59999


Q ss_pred             ccCHHHHHHHHHhhhc
Q 020880          304 PVTYKDGVKLTLAAEA  319 (320)
Q Consensus       304 ~~~~~~~l~~~i~~~~  319 (320)
                      |++++|+|+++++|++
T Consensus       302 p~~lee~i~~~~~~~~  317 (342)
T PLN02214        302 FTSTKQSLYDTVKSLQ  317 (342)
T ss_pred             ccCHHHHHHHHHHHHH
Confidence            9999999999999985

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=6.2e-43  Score=299.87  Aligned_cols=280  Identities=29%  Similarity=0.461  Sum_probs=225.3

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEECC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCA   84 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a   84 (320)
                      ||||||||||||++++++|+++|   ++|+++.|+                  .+|+.|++.+.++++.. ++|+|||||
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g---~~v~~~~r~------------------~~d~~~~~~~~~~~~~~-~~d~vi~~a   58 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEG---RVVVALTSS------------------QLDLTDPEALERLLRAI-RPDAVVNTA   58 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcC---CEEEEeCCc------------------ccCCCCHHHHHHHHHhC-CCCEEEECC
Confidence            58999999999999999999999   889988875                  46899999998888854 679999999


Q ss_pred             CccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-CCCcccCCCCCcchHHHHHHHHHHHHH
Q 020880           85 ALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIY  163 (320)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-~~~~E~~~~~p~~~Y~~sK~~~e~~~~  163 (320)
                      +.........++...+++|+.++. +++++|++.+. ++|++||.++|+... .+++|+++.+|.+.|+.+|..+|++++
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~  136 (287)
T TIGR01214        59 AYTDVDGAESDPEKAFAVNALAPQ-NLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIR  136 (287)
T ss_pred             ccccccccccCHHHHHHHHHHHHH-HHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHH
Confidence            976544444566788899999995 99999998886 899999999998643 489999999999999999999999999


Q ss_pred             HHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCcee
Q 020880          164 EKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL  243 (320)
Q Consensus       164 ~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~  243 (320)
                      .++.+++++||+++||++..    ..+...++. .+..+.++.+.+++.++++|++|+|+++..+++.+.    ..+++|
T Consensus       137 ~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~----~~~~~~  207 (287)
T TIGR01214       137 AAGPNALIVRTSWLYGGGGG----RNFVRTMLR-LAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLA----RARGVY  207 (287)
T ss_pred             HhCCCeEEEEeeecccCCCC----CCHHHHHHH-HhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhcc----CCCCeE
Confidence            99999999999999999852    222333343 344566777778788999999999999999998742    234599


Q ss_pred             EecCCCCcCHHHHHHHHHHHhCCCCCccc-----cCCccccCCCCCCCCccccChHHHHhhcCCCccCHHHHHHHHHhh
Q 020880          244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIK-----PVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAA  317 (320)
Q Consensus       244 n~~~~~~~s~~e~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~i~~  317 (320)
                      |+++++.+|+.|+++.+.+.+|.+...+.     ..................+|++|++++|||++++++++|+++++.
T Consensus       208 ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~~~~~~~~l~~~~~~  286 (287)
T TIGR01214       208 HLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGTPLPHWREALRAYLQE  286 (287)
T ss_pred             EEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCCCCccHHHHHHHHHhh
Confidence            99999999999999999999997643211     111111111222345678999999999999779999999998864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.6e-43  Score=282.46  Aligned_cols=302  Identities=21%  Similarity=0.277  Sum_probs=237.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC---CCCChhhhhh-hCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH---STPLPQLLLD-ALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r---~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      ++++||||.||||++.+..+...=.+ +..+.+..   ... ...+.+ ....+..++++|+.+...+..++.. +.+|.
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~-~~~v~idkL~~~s~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-~~id~   83 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPD-YKFVNLDKLDYCSN-LKNLEPVRNSPNYKFVEGDIADADLVLYLFET-EEIDT   83 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCC-CcEEEEeecccccc-cchhhhhccCCCceEeeccccchHHHHhhhcc-Cchhh
Confidence            68999999999999999999987433 33333222   111 111111 1135788999999998887777764 48999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeechhhhcccCC-CCc-ccCCCCCcchHHHHHH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTDQVYEGVKS-FYK-EEDEIAPVNVYGKSKV  156 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~~vy~~~~~-~~~-E~~~~~p~~~Y~~sK~  156 (320)
                      |+|.|+..+.+.+..++-.....|+.++. .++++++.. ++++|||+||..|||+... ... |.+.++|.++|+.+|+
T Consensus        84 vihfaa~t~vd~s~~~~~~~~~nnil~t~-~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKa  162 (331)
T KOG0747|consen   84 VIHFAAQTHVDRSFGDSFEFTKNNILSTH-VLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKA  162 (331)
T ss_pred             hhhhHhhhhhhhhcCchHHHhcCCchhhh-hHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHH
Confidence            99999999998888899999999999995 999999988 5899999999999997655 444 9999999999999999


Q ss_pred             HHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHh
Q 020880          157 AAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTN  230 (320)
Q Consensus       157 ~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~  230 (320)
                      ++|..++++    +.+++++|.++||||++.   +..+++.++..+. ++++..+-|+  +.|+|+|++|+++++..+++
T Consensus       163 AaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~---~~klipkFi~l~~-~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~  238 (331)
T KOG0747|consen  163 AAEMLVRSYGRSYGLPVVTTRMNNVYGPNQY---PEKLIPKFIKLAM-RGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLE  238 (331)
T ss_pred             HHHHHHHHHhhccCCcEEEEeccCccCCCcC---hHHHhHHHHHHHH-hCCCcceecCcccceeeEeHHHHHHHHHHHHh
Confidence            999999886    457899999999999985   4445555665333 5777777766  58999999999999999999


Q ss_pred             hhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCcc-ccCCCCCCCCccccChHHHHhhcCCCc-cCHH
Q 020880          231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSAS-SVDRGVQSPADISMDITKLVQTLNIDP-VTYK  308 (320)
Q Consensus       231 ~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~  308 (320)
                      +...     +++||++++.+.+..|+++.|.+.+....+.+...|.. ..+.++.....+.++.+|++ .|||+| ++++
T Consensus       239 Kg~~-----geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik-~LGw~~~~p~~  312 (331)
T KOG0747|consen  239 KGEL-----GEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIK-KLGWRPTTPWE  312 (331)
T ss_pred             cCCc-----cceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHH-hcCCcccCcHH
Confidence            8432     45999999999999999999999988754422222211 12223333445889999998 699999 9999


Q ss_pred             HHHHHHHhhhc
Q 020880          309 DGVKLTLAAEA  319 (320)
Q Consensus       309 ~~l~~~i~~~~  319 (320)
                      ++|+.+++|..
T Consensus       313 eGLrktie~y~  323 (331)
T KOG0747|consen  313 EGLRKTIEWYT  323 (331)
T ss_pred             HHHHHHHHHHH
Confidence            99999999974

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=1.1e-42  Score=329.40  Aligned_cols=300  Identities=19%  Similarity=0.264  Sum_probs=231.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC--CChhhhhh-hCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST--PLPQLLLD-ALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~--~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      .|+|||||||||||++|+++|+++|+. ++|++++|..  +....+.. ....+++++.+|++|.+.+..++.. .++|+
T Consensus         6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~-~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-~~~D~   83 (668)
T PLN02260          6 PKNILITGAAGFIASHVANRLIRNYPD-YKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT-EGIDT   83 (668)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHhCCC-CEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhh-cCCCE
Confidence            589999999999999999999998533 7898888753  11111111 1124688899999998887766543 38999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-CceEEEeechhhhcccCC----CCcccCCCCCcchHHHH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-ENLLIHLSTDQVYEGVKS----FYKEEDEIAPVNVYGKS  154 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~~~v~~Ss~~vy~~~~~----~~~E~~~~~p~~~Y~~s  154 (320)
                      |||||+......+..++...+++|+.++. +++++|++.+ +++|||+||.++||....    +.+|+++..|.++|+.+
T Consensus        84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~-~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~s  162 (668)
T PLN02260         84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTH-VLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSAT  162 (668)
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHH-HHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHH
Confidence            99999987665555567788899999995 9999999987 889999999999996543    23677888899999999


Q ss_pred             HHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHH
Q 020880          155 KVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       155 K~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~  228 (320)
                      |..+|++++.+    +.+++++||++||||++.   ...++..++.. ...+.++.+.++  +.++|||++|+|+++..+
T Consensus       163 K~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~---~~~~i~~~~~~-a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~  238 (668)
T PLN02260        163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF---PEKLIPKFILL-AMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVV  238 (668)
T ss_pred             HHHHHHHHHHHHHHcCCCEEEECcccccCcCCC---cccHHHHHHHH-HhCCCCeEEecCCCceEeeEEHHHHHHHHHHH
Confidence            99999988764    567899999999999863   22333344443 346777777764  579999999999999999


Q ss_pred             HhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCc-cccCCccccCCCCCCCCccccChHHHHhhcCCCc-cC
Q 020880          229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSL-IKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VT  306 (320)
Q Consensus       229 ~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~  306 (320)
                      +++..     .+++||+++++.+|+.|+++.+.+.+|.+... +...     .........+.+|++|++ .|||+| ++
T Consensus       239 l~~~~-----~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~-----~~~p~~~~~~~~d~~k~~-~lGw~p~~~  307 (668)
T PLN02260        239 LHKGE-----VGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFV-----ENRPFNDQRYFLDDQKLK-KLGWQERTS  307 (668)
T ss_pred             HhcCC-----CCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeec-----CCCCCCcceeecCHHHHH-HcCCCCCCC
Confidence            87632     24599999999999999999999999976432 1111     111222345678999996 599999 89


Q ss_pred             HHHHHHHHHhhhcC
Q 020880          307 YKDGVKLTLAAEAT  320 (320)
Q Consensus       307 ~~~~l~~~i~~~~~  320 (320)
                      ++|+|+++++|+++
T Consensus       308 ~~egl~~~i~w~~~  321 (668)
T PLN02260        308 WEEGLKKTMEWYTS  321 (668)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999999863

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.6e-42  Score=302.32  Aligned_cols=293  Identities=17%  Similarity=0.133  Sum_probs=219.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhh---h--hCCCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL---D--ALPHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~---~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      +|+||||||+||||++++++|+++|   ++|++..|+........   .  ....+++++.+|++|.+++.++++   ++
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~   78 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRG---YTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID---GC   78 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCC---CEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc---CC
Confidence            5899999999999999999999999   88888888765432221   1  112357889999999999888887   79


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeechhhhccc------CCCCcccCCCCCc--
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTDQVYEGV------KSFYKEEDEIAPV--  148 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~~vy~~~------~~~~~E~~~~~p~--  148 (320)
                      |+|||+||......+..++...+++|+.+++ +++++|.+. +.++||++||.++|+..      ..+++|+++.+|.  
T Consensus        79 d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~-~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~  157 (325)
T PLN02989         79 ETVFHTASPVAITVKTDPQVELINPAVNGTI-NVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFA  157 (325)
T ss_pred             CEEEEeCCCCCCCCCCChHHHHHHHHHHHHH-HHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHh
Confidence            9999999976443334456788899999996 999999875 56799999999887542      2257898877653  


Q ss_pred             ----chHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          149 ----NVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       149 ----~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                          ++|+.+|..+|++++.+    +.+++++||+++|||+....  ..+...++..++. ++..  .+.+.++|+|++|
T Consensus       158 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~--~~~~~~~i~~~~~-~~~~--~~~~~r~~i~v~D  232 (325)
T PLN02989        158 EERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPT--LNFSVAVIVELMK-GKNP--FNTTHHRFVDVRD  232 (325)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCC--CCchHHHHHHHHc-CCCC--CCCcCcCeeEHHH
Confidence                67999999999988764    56889999999999986422  1233345555443 3332  2345689999999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhc
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL  300 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  300 (320)
                      +|++++.+++++..     ++.||++ +..+|++|+++.+.+.++... +. . ..  .............|++|+++ |
T Consensus       233 va~a~~~~l~~~~~-----~~~~ni~-~~~~s~~ei~~~i~~~~~~~~-~~-~-~~--~~~~~~~~~~~~~~~~k~~~-l  300 (325)
T PLN02989        233 VALAHVKALETPSA-----NGRYIID-GPVVTIKDIENVLREFFPDLC-IA-D-RN--EDITELNSVTFNVCLDKVKS-L  300 (325)
T ss_pred             HHHHHHHHhcCccc-----CceEEEe-cCCCCHHHHHHHHHHHCCCCC-CC-C-CC--CCcccccccCcCCCHHHHHH-c
Confidence            99999999987432     2489995 568999999999999987321 11 0 00  01111122356889999876 9


Q ss_pred             CCCc-cCHHHHHHHHHhhhc
Q 020880          301 NIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       301 g~~~-~~~~~~l~~~i~~~~  319 (320)
                      ||+| ++++++|+++++|++
T Consensus       301 g~~p~~~l~~gi~~~~~~~~  320 (325)
T PLN02989        301 GIIEFTPTETSLRDTVLSLK  320 (325)
T ss_pred             CCCCCCCHHHHHHHHHHHHH
Confidence            9999 899999999999985

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=3.4e-42  Score=302.04  Aligned_cols=303  Identities=21%  Similarity=0.224  Sum_probs=227.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhh---hhhC-CCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL---LDAL-PHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~---~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |+|||||||||||++|+++|+++|   ++|+++.|........   .... +..+.++.+|++|++++.++++.. ++|+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~   76 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDH-AIDT   76 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCC---CeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcC-CCCE
Confidence            579999999999999999999999   7888876643222211   1111 234677899999999888887643 7999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-CCCcccCCC-CCcchHHHHHHH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-SFYKEEDEI-APVNVYGKSKVA  157 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-~~~~E~~~~-~p~~~Y~~sK~~  157 (320)
                      |||+|+.........++...+++|+.++. +++++|++.++++||++||.++||... .+++|+++. .|.+.|+.+|..
T Consensus        77 vvh~a~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~  155 (338)
T PRK10675         77 VIHFAGLKAVGESVQKPLEYYDNNVNGTL-RLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLM  155 (338)
T ss_pred             EEECCccccccchhhCHHHHHHHHHHHHH-HHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHH
Confidence            99999876543333456788999999995 999999999999999999999998543 378999886 788999999999


Q ss_pred             HHHHHHHH-----cCCeeEEeecccccCCCCCCC---CC---CChHHHHHHHHhcC-CceEee--------cCcccCcee
Q 020880          158 AEKFIYEK-----CSNFAILRSSIIYGPQTISPV---PK---SLPIQWIDSVLSKG-EKVEFF--------HDECRCPVY  217 (320)
Q Consensus       158 ~e~~~~~~-----~~~~~ilR~~~v~G~~~~~~~---~~---~~~~~~~~~~~~~~-~~~~~~--------~~~~~~~i~  217 (320)
                      +|++++.+     +.+++++|++.+||+......   ..   ..+..++..+...+ ..+.++        |.+.++|||
T Consensus       156 ~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~  235 (338)
T PRK10675        156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH  235 (338)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEE
Confidence            99999875     235789999999998532111   11   11223344444322 234443        345799999


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHH
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV  297 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  297 (320)
                      ++|+|++++.+++....  ...+++||+++++.+|+.|+++.+.+.+|.+..+. ..+     ..........+|++|++
T Consensus       236 v~D~a~~~~~~~~~~~~--~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~-----~~~~~~~~~~~~~~k~~  307 (338)
T PRK10675        236 VMDLADGHVAAMEKLAN--KPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYH-FAP-----RREGDLPAYWADASKAD  307 (338)
T ss_pred             HHHHHHHHHHHHHhhhc--cCCCceEEecCCCceeHHHHHHHHHHHhCCCCCee-eCC-----CCCCchhhhhcCHHHHH
Confidence            99999999999876211  11245999999999999999999999999764432 111     11122345678999999


Q ss_pred             hhcCCCc-cCHHHHHHHHHhhhc
Q 020880          298 QTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       298 ~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      +++||+| ++++++|+++++|++
T Consensus       308 ~~lg~~p~~~~~~~~~~~~~~~~  330 (338)
T PRK10675        308 RELNWRVTRTLDEMAQDTWHWQS  330 (338)
T ss_pred             HHhCCCCcCcHHHHHHHHHHHHH
Confidence            9999999 899999999999986

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.1e-42  Score=277.53  Aligned_cols=290  Identities=26%  Similarity=0.355  Sum_probs=234.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC--CCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      .++|+||||.|||||||++.|..+|   ++|++++.-...........  ..+++.+..|+..+     ++.   .+|.|
T Consensus        27 ~lrI~itGgaGFIgSHLvdkLm~eg---h~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~---evD~I   95 (350)
T KOG1429|consen   27 NLRILITGGAGFIGSHLVDKLMTEG---HEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLK---EVDQI   95 (350)
T ss_pred             CcEEEEecCcchHHHHHHHHHHhcC---CeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHH---Hhhhh
Confidence            4799999999999999999999999   67777766543332222211  24566677777664     555   78999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccC-----CCCCcchHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEED-----EIAPVNVYGKS  154 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~-----~~~p~~~Y~~s  154 (320)
                      ||+|+..++.....+|-.....|+.+++ +.+..|++-+. ||+++||++|||+... |..|+.     |..|...|...
T Consensus        96 yhLAapasp~~y~~npvktIktN~igtl-n~lglakrv~a-R~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydeg  173 (350)
T KOG1429|consen   96 YHLAAPASPPHYKYNPVKTIKTNVIGTL-NMLGLAKRVGA-RFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEG  173 (350)
T ss_pred             hhhccCCCCcccccCccceeeecchhhH-HHHHHHHHhCc-eEEEeecccccCCcccCCCccccccccCcCCchhhhhHH
Confidence            9999999988888899999999999997 99999999885 9999999999997544 555553     46678899999


Q ss_pred             HHHHHHHHHHHc----CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHH
Q 020880          155 KVAAEKFIYEKC----SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       155 K~~~e~~~~~~~----~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~  228 (320)
                      |..+|.++..|+    .++.|.|+++.|||.-... ..+.+..++.+++ ++.++.++|+  +.|+|.|++|++++++++
T Consensus       174 Kr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~-dgrvvsnf~~q~l-r~epltv~g~G~qtRSF~yvsD~Vegll~L  251 (350)
T KOG1429|consen  174 KRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMD-DGRVVSNFIAQAL-RGEPLTVYGDGKQTRSFQYVSDLVEGLLRL  251 (350)
T ss_pred             HHHHHHHHHHhhcccCcEEEEEeeecccCCccccC-CChhhHHHHHHHh-cCCCeEEEcCCcceEEEEeHHHHHHHHHHH
Confidence            999999998875    4678999999999986432 3555666777666 7899999987  589999999999999999


Q ss_pred             HhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCH
Q 020880          229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTY  307 (320)
Q Consensus       229 ~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~  307 (320)
                      ++++..+      .+|+++++.+|+.|+++.+.+..+....+..      ......++..+..|++++++.|||.| .++
T Consensus       252 m~s~~~~------pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~------~~~~~Ddp~kR~pDit~ake~LgW~Pkv~L  319 (350)
T KOG1429|consen  252 MESDYRG------PVNIGNPGEFTMLELAEMVKELIGPVSEIEF------VENGPDDPRKRKPDITKAKEQLGWEPKVSL  319 (350)
T ss_pred             hcCCCcC------CcccCCccceeHHHHHHHHHHHcCCCcceee------cCCCCCCccccCccHHHHHHHhCCCCCCcH
Confidence            9986543      5999999999999999999999864433321      22344467778899999999999999 999


Q ss_pred             HHHHHHHHhhhc
Q 020880          308 KDGVKLTLAAEA  319 (320)
Q Consensus       308 ~~~l~~~i~~~~  319 (320)
                      +|+|+.++.|++
T Consensus       320 ~egL~~t~~~fr  331 (350)
T KOG1429|consen  320 REGLPLTVTYFR  331 (350)
T ss_pred             HHhhHHHHHHHH
Confidence            999999999986

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1e-42  Score=284.41  Aligned_cols=304  Identities=21%  Similarity=0.235  Sum_probs=243.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC----ChhhhhhhCC--CcceEEEeeCCCcccHHHHHHHhCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP----LPQLLLDALP--HSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~----~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      .++||||||.||||+|.+-+|+++|   |.|++++.-..    ...+.....+  ..+.++++|++|.++++++++.+ .
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~g---y~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-~   77 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRG---YGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-K   77 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCC---CcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-C
Confidence            4789999999999999999999999   56665554322    2222222233  78999999999999999999987 8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCC-CcchHHHH
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIA-PVNVYGKS  154 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~-p~~~Y~~s  154 (320)
                      +|.|+|+|+......+.++|..++.+|+.+++ ++++.+++.+++.+|+.||+.+||.... |++|+++.. |.++|+.+
T Consensus        78 fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtl-nlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~t  156 (343)
T KOG1371|consen   78 FDAVMHFAALAAVGESMENPLSYYHNNIAGTL-NLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKT  156 (343)
T ss_pred             CceEEeehhhhccchhhhCchhheehhhhhHH-HHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhh
Confidence            99999999999888899999999999999997 9999999999999999999999997766 999999988 99999999


Q ss_pred             HHHHHHHHHHHcC----CeeEEeeccccc--CCCCC-----CCCCCChHHHHHHHHhcCCceEee--------cCcccCc
Q 020880          155 KVAAEKFIYEKCS----NFAILRSSIIYG--PQTIS-----PVPKSLPIQWIDSVLSKGEKVEFF--------HDECRCP  215 (320)
Q Consensus       155 K~~~e~~~~~~~~----~~~ilR~~~v~G--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~  215 (320)
                      |..+|+++..+..    ..+.||.++++|  |....     ..+..+.+...+.++.+.....+.        |+..|++
T Consensus       157 K~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdy  236 (343)
T KOG1371|consen  157 KKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDY  236 (343)
T ss_pred             hHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecc
Confidence            9999999998754    457899999999  33211     112222211111122222222222        3568999


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHH
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK  295 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  295 (320)
                      ||+-|.|+..+.++.+.....+  .++||++++...++.+++.++.++.|.+.+.. .     .+.+..+......+.++
T Consensus       237 i~v~Dla~~h~~al~k~~~~~~--~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~-~-----v~~R~gdv~~~ya~~~~  308 (343)
T KOG1371|consen  237 IHVLDLADGHVAALGKLRGAAE--FGVYNLGTGKGSSVLELVTAFEKALGVKIKKK-V-----VPRRNGDVAFVYANPSK  308 (343)
T ss_pred             eeeEehHHHHHHHhhccccchh--eeeEeecCCCCccHHHHHHHHHHHhcCCCCcc-c-----cCCCCCCceeeeeChHH
Confidence            9999999999999998765333  34999999999999999999999999876543 1     23455566778899999


Q ss_pred             HHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          296 LVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       296 ~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      +.++|||+| +.++++++++++|-.
T Consensus       309 a~~elgwk~~~~iee~c~dlw~W~~  333 (343)
T KOG1371|consen  309 AQRELGWKAKYGLQEMLKDLWRWQK  333 (343)
T ss_pred             HHHHhCCccccCHHHHHHHHHHHHh
Confidence            999999999 999999999999964

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=4.1e-42  Score=297.57  Aligned_cols=290  Identities=21%  Similarity=0.247  Sum_probs=209.3

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH------hCCCCE
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK------FGQPDV   79 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~~~~d~   79 (320)
                      |||||||||||++|+++|+++|   ++++++.|+.......       ..+..+|+.|..+..++++.      +.++|+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g---~~~v~~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~   71 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKG---ITDILVVDNLKDGTKF-------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEA   71 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCC---CceEEEecCCCcchHH-------HhhhhhhhhhhhhHHHHHHHHhcccccCCccE
Confidence            8999999999999999999999   7666666654332111       11234566655433333322      136999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAA  158 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~  158 (320)
                      ||||||.....  ..+++..++.|+.++. +++++|++.++ ++||+||.++||.... +.+|+++..|.++|+.+|..+
T Consensus        72 Vih~A~~~~~~--~~~~~~~~~~n~~~t~-~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  147 (308)
T PRK11150         72 IFHEGACSSTT--EWDGKYMMDNNYQYSK-ELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLF  147 (308)
T ss_pred             EEECceecCCc--CCChHHHHHHHHHHHH-HHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHH
Confidence            99999865432  2345667899999996 99999999988 7999999999997543 678888888999999999999


Q ss_pred             HHHHHHH----cCCeeEEeecccccCCCCCCC-CCCChHHHHHHHHhcCCceEee-cC--cccCceeHHHHHHHHHHHHh
Q 020880          159 EKFIYEK----CSNFAILRSSIIYGPQTISPV-PKSLPIQWIDSVLSKGEKVEFF-HD--ECRCPVYVRDVVKIILALTN  230 (320)
Q Consensus       159 e~~~~~~----~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~i~v~D~a~~~~~~~~  230 (320)
                      |++++++    +.+++++||+++|||++.... .......++..+ .++....++ ++  ..|+|+|++|+|++++.+++
T Consensus       148 E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~  226 (308)
T PRK11150        148 DEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQL-NNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWE  226 (308)
T ss_pred             HHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHH-hcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHh
Confidence            9988876    457899999999999864221 111222223333 345544444 44  47999999999999999887


Q ss_pred             hhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-c-CHH
Q 020880          231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-V-TYK  308 (320)
Q Consensus       231 ~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~-~~~  308 (320)
                      ...      +++||+++++.+|+.|+++.+.+.++... + ...+.+.. ..........+|++|+++ +||+| . +++
T Consensus       227 ~~~------~~~yni~~~~~~s~~el~~~i~~~~~~~~-~-~~~~~~~~-~~~~~~~~~~~d~~k~~~-~g~~p~~~~~~  296 (308)
T PRK11150        227 NGV------SGIFNCGTGRAESFQAVADAVLAYHKKGE-I-EYIPFPDK-LKGRYQAFTQADLTKLRA-AGYDKPFKTVA  296 (308)
T ss_pred             cCC------CCeEEcCCCCceeHHHHHHHHHHHhCCCc-c-eeccCccc-cccccceecccCHHHHHh-cCCCCCCCCHH
Confidence            631      34999999999999999999999998531 1 11111110 000112345789999986 79997 4 999


Q ss_pred             HHHHHHHhhhcC
Q 020880          309 DGVKLTLAAEAT  320 (320)
Q Consensus       309 ~~l~~~i~~~~~  320 (320)
                      ++|+++++|++.
T Consensus       297 ~gl~~~~~~~~~  308 (308)
T PRK11150        297 EGVAEYMAWLNR  308 (308)
T ss_pred             HHHHHHHHHhhC
Confidence            999999999863

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=4.7e-42  Score=298.60  Aligned_cols=299  Identities=23%  Similarity=0.332  Sum_probs=230.2

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC--Chhhhhhh-CCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP--LPQLLLDA-LPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      +|||||||||||++++++|+++|.. ++|+++.|...  ........ ...++.++.+|++|++++.++++.+ ++|+||
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~vi   78 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPD-AEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEH-QPDAVV   78 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCC-CEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhc-CCCEEE
Confidence            5999999999999999999998743 67887776421  11111111 1235778999999999999888854 599999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeechhhhcccCC--CCcccCCCCCcchHHHHHHHH
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTDQVYEGVKS--FYKEEDEIAPVNVYGKSKVAA  158 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~--~~~E~~~~~p~~~Y~~sK~~~  158 (320)
                      |+|+......+..+++..+++|+.++. +++++|.+.+.+ ++|++||.++||....  +++|+++..|.+.|+.+|..+
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~  157 (317)
T TIGR01181        79 HFAAESHVDRSISGPAAFIETNVVGTY-TLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAAS  157 (317)
T ss_pred             EcccccCchhhhhCHHHHHHHHHHHHH-HHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHH
Confidence            999987655455567888999999996 999999886543 8999999999996543  688999988999999999999


Q ss_pred             HHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHhhh
Q 020880          159 EKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       159 e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~~~  232 (320)
                      |.+++.+    +.+++++||+.+|||+...   ..++..++.... .+.++.++++  ..++|+|++|+|+++..++++.
T Consensus       158 e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~---~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~  233 (317)
T TIGR01181       158 DHLVRAYHRTYGLPALITRCSNNYGPYQFP---EKLIPLMITNAL-AGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKG  233 (317)
T ss_pred             HHHHHHHHHHhCCCeEEEEeccccCCCCCc---ccHHHHHHHHHh-cCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCC
Confidence            9987754    5689999999999997531   233444444443 5666666654  5889999999999999999764


Q ss_pred             hccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHH
Q 020880          233 LSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGV  311 (320)
Q Consensus       233 ~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l  311 (320)
                      ..     +++||+++++.+|++|+++.+.+.++.+.......+     ........+.+|++|++++|||+| +++++++
T Consensus       234 ~~-----~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i  303 (317)
T TIGR01181       234 RV-----GETYNIGGGNERTNLEVVETILELLGKDEDLITHVE-----DRPGHDRRYAIDASKIKRELGWAPKYTFEEGL  303 (317)
T ss_pred             CC-----CceEEeCCCCceeHHHHHHHHHHHhCCCcccccccC-----CCccchhhhcCCHHHHHHHhCCCCCCcHHHHH
Confidence            22     359999999999999999999999997544322111     111122334689999999999999 8999999


Q ss_pred             HHHHhhhcC
Q 020880          312 KLTLAAEAT  320 (320)
Q Consensus       312 ~~~i~~~~~  320 (320)
                      +++++|+++
T Consensus       304 ~~~~~~~~~  312 (317)
T TIGR01181       304 RKTVQWYLD  312 (317)
T ss_pred             HHHHHHHHh
Confidence            999999863

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=7.1e-42  Score=284.49  Aligned_cols=294  Identities=19%  Similarity=0.168  Sum_probs=222.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhh--hhhhC---CCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL--LLDAL---PHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~--~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      +|+|+|||||||||+|++++||++|   |+|++++|+++..+.  .+..+   +++...+.+||.|++++.++++   +|
T Consensus         6 ~~~VcVTGAsGfIgswivk~LL~rG---Y~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~---gc   79 (327)
T KOG1502|consen    6 GKKVCVTGASGFIGSWIVKLLLSRG---YTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID---GC   79 (327)
T ss_pred             CcEEEEeCCchHHHHHHHHHHHhCC---CEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh---CC
Confidence            5899999999999999999999999   999999999887433  23333   3568889999999999999998   99


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-CceEEEeechhhhccc------CCCCcccCCCCC---
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-ENLLIHLSTDQVYEGV------KSFYKEEDEIAP---  147 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~~~v~~Ss~~vy~~~------~~~~~E~~~~~p---  147 (320)
                      |.|||+|++..+.... ...+..+..+.|++ |++++|++.. ++|+|++||.++-...      ...++|+....+   
T Consensus        80 dgVfH~Asp~~~~~~~-~e~~li~pav~Gt~-nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~  157 (327)
T KOG1502|consen   80 DGVFHTASPVDFDLED-PEKELIDPAVKGTK-NVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFC  157 (327)
T ss_pred             CEEEEeCccCCCCCCC-cHHhhhhHHHHHHH-HHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHH
Confidence            9999999988665333 23378999999996 9999999988 9999999998765422      225778775433   


Q ss_pred             ---cchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 ---VNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ---~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                         ...|..||..+|+..+++    +.+.+.+.|+.|+||........+.  ..+...+ +|. .....+....||||+|
T Consensus       158 ~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~--~~~l~~i-~G~-~~~~~n~~~~~VdVrD  233 (327)
T KOG1502|consen  158 RCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSL--NALLKLI-KGL-AETYPNFWLAFVDVRD  233 (327)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhH--HHHHHHH-hcc-cccCCCCceeeEeHHH
Confidence               258999999999988876    3578999999999998754222221  1222333 232 2222333444999999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhc
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL  300 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  300 (320)
                      +|.+++.+++++.+++     .|.+.++ ..++.|+++.+.+.++...     +|...............++++|++++.
T Consensus       234 VA~AHv~a~E~~~a~G-----Ryic~~~-~~~~~ei~~~l~~~~P~~~-----ip~~~~~~~~~~~~~~~~~~~k~k~lg  302 (327)
T KOG1502|consen  234 VALAHVLALEKPSAKG-----RYICVGE-VVSIKEIADILRELFPDYP-----IPKKNAEEHEGFLTSFKVSSEKLKSLG  302 (327)
T ss_pred             HHHHHHHHHcCcccCc-----eEEEecC-cccHHHHHHHHHHhCCCCC-----CCCCCCccccccccccccccHHHHhcc
Confidence            9999999999987776     4777664 4669999999999877543     221111111122233468999998866


Q ss_pred             CCCccCHHHHHHHHHhhhc
Q 020880          301 NIDPVTYKDGVKLTLAAEA  319 (320)
Q Consensus       301 g~~~~~~~~~l~~~i~~~~  319 (320)
                      ||++++++|++.+++++++
T Consensus       303 ~~~~~~l~e~~~dt~~sl~  321 (327)
T KOG1502|consen  303 GFKFRPLEETLSDTVESLR  321 (327)
T ss_pred             cceecChHHHHHHHHHHHH
Confidence            6999999999999999875

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=8.2e-42  Score=297.68  Aligned_cols=291  Identities=19%  Similarity=0.172  Sum_probs=217.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh-----hCCCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      .|+|||||||||||++|+++|+++|   ++|++++|+.........     ....+++++.+|++|++.+.++++   ++
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~   77 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRG---YTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD---GC   77 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCC---CEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc---CC
Confidence            4789999999999999999999999   889988887654322111     112467889999999999888887   89


Q ss_pred             CEEEECCCccCccccccCch-hhhhccccccHHHHHhhhhhc-cCceEEEeechhh--hccc----CCCCcccCCCCCc-
Q 020880           78 DVVVNCAALSVPRVCENDPD-SAMSINVPSSLVNWLSSFTEN-KENLLIHLSTDQV--YEGV----KSFYKEEDEIAPV-  148 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~~v--y~~~----~~~~~E~~~~~p~-  148 (320)
                      |+|||+|+....  ...++. ..+++|+.++. +++++|.+. ++++|||+||.++  |+..    ..+++|+.+..|. 
T Consensus        78 d~Vih~A~~~~~--~~~~~~~~~~~~nv~gt~-~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~  154 (322)
T PLN02662         78 EGVFHTASPFYH--DVTDPQAELIDPAVKGTL-NVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAF  154 (322)
T ss_pred             CEEEEeCCcccC--CCCChHHHHHHHHHHHHH-HHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhH
Confidence            999999997532  223454 78899999996 999999887 8889999999864  6532    2357888766552 


Q ss_pred             -----chHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          149 -----NVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       149 -----~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                           +.|+.+|..+|++++.+    +.+++++||+++|||.....  .......+...+. +.+  ..+++.++|||++
T Consensus       155 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~--~~~~~~~~~~~~~-~~~--~~~~~~~~~i~v~  229 (322)
T PLN02662        155 CEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPT--LNTSAEAILNLIN-GAQ--TFPNASYRWVDVR  229 (322)
T ss_pred             hhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCC--CCchHHHHHHHhc-CCc--cCCCCCcCeEEHH
Confidence                 58999999999987653    67899999999999975322  1122234444443 433  2345688999999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhh
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT  299 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  299 (320)
                      |+|++++.+++++...     +.||++ +..+|++|+++.+.+.++... +    +... ...........+|++|+++ 
T Consensus       230 Dva~a~~~~~~~~~~~-----~~~~~~-g~~~s~~e~~~~i~~~~~~~~-~----~~~~-~~~~~~~~~~~~d~~k~~~-  296 (322)
T PLN02662        230 DVANAHIQAFEIPSAS-----GRYCLV-ERVVHYSEVVKILHELYPTLQ-L----PEKC-ADDKPYVPTYQVSKEKAKS-  296 (322)
T ss_pred             HHHHHHHHHhcCcCcC-----CcEEEe-CCCCCHHHHHHHHHHHCCCCC-C----CCCC-CCccccccccccChHHHHH-
Confidence            9999999999874322     368886 478999999999999876421 1    1100 0111123456799999985 


Q ss_pred             cCCCccCHHHHHHHHHhhhcC
Q 020880          300 LNIDPVTYKDGVKLTLAAEAT  320 (320)
Q Consensus       300 lg~~~~~~~~~l~~~i~~~~~  320 (320)
                      |||++++++++|+++++|++.
T Consensus       297 lg~~~~~~~~~l~~~~~~~~~  317 (322)
T PLN02662        297 LGIEFIPLEVSLKDTVESLKE  317 (322)
T ss_pred             hCCccccHHHHHHHHHHHHHH
Confidence            999999999999999999863

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=1.2e-41  Score=298.34  Aligned_cols=294  Identities=19%  Similarity=0.183  Sum_probs=213.1

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhh--hhCC--CcceEEEeeCCCcccHHHHHHHhCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL--DALP--HSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~--~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      |.+|+|||||||||||++|+++|+++|   ++|+++.|+.+......  ..+.  ++++++.+|++|.+++.++++   +
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~   80 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKG---YAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA---G   80 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCC---CEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh---c
Confidence            457899999999999999999999999   88988888765432211  1111  257889999999998888776   7


Q ss_pred             CCEEEECCCccCccccccCch-hhhhccccccHHHHHhhhhhc-cCceEEEeechhhhcccC-----CCCcccC------
Q 020880           77 PDVVVNCAALSVPRVCENDPD-SAMSINVPSSLVNWLSSFTEN-KENLLIHLSTDQVYEGVK-----SFYKEED------  143 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~~vy~~~~-----~~~~E~~------  143 (320)
                      +|+|||+|+....  ...++. ..+++|+.++. ++++++.+. ++++|||+||.++|+...     .+++|+.      
T Consensus        81 ~d~vih~A~~~~~--~~~~~~~~~~~~nv~g~~-~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~  157 (338)
T PLN00198         81 CDLVFHVATPVNF--ASEDPENDMIKPAIQGVH-NVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEF  157 (338)
T ss_pred             CCEEEEeCCCCcc--CCCChHHHHHHHHHHHHH-HHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhh
Confidence            9999999996422  222343 46789999996 999999876 588999999999998432     2455542      


Q ss_pred             ---CCCCcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec-------
Q 020880          144 ---EIAPVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH-------  209 (320)
Q Consensus       144 ---~~~p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  209 (320)
                         +..|.++|+.||.++|.+++.+    +.+++++||++||||++....+ ..+ ..+.... .+.++.+.|       
T Consensus       158 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~-~~~-~~~~~~~-~~~~~~~~g~~~~~~~  234 (338)
T PLN00198        158 LTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIP-SSL-SLAMSLI-TGNEFLINGLKGMQML  234 (338)
T ss_pred             hhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCC-CcH-HHHHHHH-cCCccccccccccccc
Confidence               3457788999999999988764    5688999999999998642222 222 1222323 455555444       


Q ss_pred             CcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCcc
Q 020880          210 DECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI  289 (320)
Q Consensus       210 ~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (320)
                      ++.++|+|++|+|++++.+++.+...     +.|+ +++..+|+.|+++.+.+.++... +....     ... ......
T Consensus       235 ~~~~~~i~V~D~a~a~~~~~~~~~~~-----~~~~-~~~~~~s~~el~~~i~~~~~~~~-~~~~~-----~~~-~~~~~~  301 (338)
T PLN00198        235 SGSISITHVEDVCRAHIFLAEKESAS-----GRYI-CCAANTSVPELAKFLIKRYPQYQ-VPTDF-----GDF-PSKAKL  301 (338)
T ss_pred             cCCcceeEHHHHHHHHHHHhhCcCcC-----CcEE-EecCCCCHHHHHHHHHHHCCCCC-CCccc-----ccc-CCCCcc
Confidence            12479999999999999999874322     2575 45577899999999998876321 10000     000 112345


Q ss_pred             ccChHHHHhhcCCCc-cCHHHHHHHHHhhhcC
Q 020880          290 SMDITKLVQTLNIDP-VTYKDGVKLTLAAEAT  320 (320)
Q Consensus       290 ~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~~  320 (320)
                      .+|++|+++ +||+| ++++|+|+++++|+++
T Consensus       302 ~~~~~k~~~-~G~~p~~~l~~gi~~~~~~~~~  332 (338)
T PLN00198        302 IISSEKLIS-EGFSFEYGIEEIYDQTVEYFKA  332 (338)
T ss_pred             ccChHHHHh-CCceecCcHHHHHHHHHHHHHH
Confidence            689999987 59999 8999999999999874

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.7e-41  Score=293.49  Aligned_cols=295  Identities=28%  Similarity=0.353  Sum_probs=233.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCC-CEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQP-DVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-d~Vih   82 (320)
                      |+|||||||||||++|+++|+++|   ++|++++|...+.....    ..+.++.+|++|.+.+.+..+   .+ |+|||
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~---~~~d~vih   70 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAG---HDVRGLDRLRDGLDPLL----SGVEFVVLDLTDRDLVDELAK---GVPDAVIH   70 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCC---CeEEEEeCCCccccccc----cccceeeecccchHHHHHHHh---cCCCEEEE
Confidence            349999999999999999999999   89999999876654332    356778999999877776666   55 99999


Q ss_pred             CCCccCcccccc-CchhhhhccccccHHHHHhhhhhccCceEEEeechhhhccc--CCCCccc-CCCCCcchHHHHHHHH
Q 020880           83 CAALSVPRVCEN-DPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV--KSFYKEE-DEIAPVNVYGKSKVAA  158 (320)
Q Consensus        83 ~a~~~~~~~~~~-~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~--~~~~~E~-~~~~p~~~Y~~sK~~~  158 (320)
                      +|+......... ++...+..|+.++. +++++|++.+++++||+||.++|+..  ..+++|+ .+..|.++|+.+|.++
T Consensus        71 ~aa~~~~~~~~~~~~~~~~~~nv~gt~-~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~  149 (314)
T COG0451          71 LAAQSSVPDSNASDPAEFLDVNVDGTL-NLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAA  149 (314)
T ss_pred             ccccCchhhhhhhCHHHHHHHHHHHHH-HHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHH
Confidence            999876544333 45678999999996 99999999999999998888877754  2278898 7888888999999999


Q ss_pred             HHHHHHHc----CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCc-eEeecC--cccCceeHHHHHHHHHHHHhh
Q 020880          159 EKFIYEKC----SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEK-VEFFHD--ECRCPVYVRDVVKIILALTNR  231 (320)
Q Consensus       159 e~~~~~~~----~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~i~v~D~a~~~~~~~~~  231 (320)
                      |++++.+.    .+++++||++||||++.......+...++.... .+.+ +.+.++  ..++++|++|+++++++++++
T Consensus       150 E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  228 (314)
T COG0451         150 EQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLL-KGEPIIVIGGDGSQTRDFVYVDDVADALLLALEN  228 (314)
T ss_pred             HHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHH-hCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhC
Confidence            99998875    689999999999999865433334444443333 4554 444443  467999999999999999998


Q ss_pred             hhccccccCceeEecCCC-CcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHH
Q 020880          232 WLSEDKQMQLLLNVGGPD-RVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKD  309 (320)
Q Consensus       232 ~~~~~~~~~~~~n~~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~  309 (320)
                      +..     . .||++++. .+|++|+++.+.+.++.+.+.....+.   ...........+|++|.++.|||.| +++++
T Consensus       229 ~~~-----~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~  299 (314)
T COG0451         229 PDG-----G-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL---GRRGDLREGKLLDISKARAALGWEPKVSLEE  299 (314)
T ss_pred             CCC-----c-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCC---CCCCcccccccCCHHHHHHHhCCCCCCCHHH
Confidence            432     2 89999997 899999999999999987653111111   1223344567899999999999999 89999


Q ss_pred             HHHHHHhhhc
Q 020880          310 GVKLTLAAEA  319 (320)
Q Consensus       310 ~l~~~i~~~~  319 (320)
                      ++.++++|+.
T Consensus       300 ~i~~~~~~~~  309 (314)
T COG0451         300 GLADTLEWLL  309 (314)
T ss_pred             HHHHHHHHHH
Confidence            9999999874

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=9.7e-42  Score=295.19  Aligned_cols=279  Identities=21%  Similarity=0.248  Sum_probs=213.0

Q ss_pred             EEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEECCCc
Q 020880            7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAAL   86 (320)
Q Consensus         7 lItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a~~   86 (320)
                      ||||||||||++|++.|+++|   ++|+...+.                 ..+|++|.+++.++++.. ++|+|||||+.
T Consensus         1 lItGa~GfiG~~l~~~L~~~g---~~v~~~~~~-----------------~~~Dl~~~~~l~~~~~~~-~~d~Vih~A~~   59 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALG---FTNLVLRTH-----------------KELDLTRQADVEAFFAKE-KPTYVILAAAK   59 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCC---CcEEEeecc-----------------ccCCCCCHHHHHHHHhcc-CCCEEEEeeee
Confidence            699999999999999999999   566544332                 358999999998888764 78999999998


Q ss_pred             cCc-cccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhccc-CCCCcccC----CCCCcc-hHHHHHHHHH
Q 020880           87 SVP-RVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV-KSFYKEED----EIAPVN-VYGKSKVAAE  159 (320)
Q Consensus        87 ~~~-~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~-~~~~~E~~----~~~p~~-~Y~~sK~~~e  159 (320)
                      ... ..+..++...++.|+.++. +++++|++.+++++||+||.++|++. ..+++|++    +..|.+ .|+.+|.++|
T Consensus        60 ~~~~~~~~~~~~~~~~~n~~~~~-~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e  138 (306)
T PLN02725         60 VGGIHANMTYPADFIRENLQIQT-NVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGI  138 (306)
T ss_pred             ecccchhhhCcHHHHHHHhHHHH-HHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHH
Confidence            543 2334567788999999996 99999999999999999999999964 34788886    445544 5999999999


Q ss_pred             HHHHH----HcCCeeEEeecccccCCCCCC-CCCCChHHHHHH---HHhcCCceEe-ec--CcccCceeHHHHHHHHHHH
Q 020880          160 KFIYE----KCSNFAILRSSIIYGPQTISP-VPKSLPIQWIDS---VLSKGEKVEF-FH--DECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       160 ~~~~~----~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~  228 (320)
                      ++++.    .+.+++++||+.+|||+.... ....++..++..   ....+.++.+ ++  ++.++|||++|++++++++
T Consensus       139 ~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~  218 (306)
T PLN02725        139 KMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFL  218 (306)
T ss_pred             HHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHH
Confidence            87764    466899999999999985321 112222333322   2234555554 44  4578999999999999999


Q ss_pred             HhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCH
Q 020880          229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTY  307 (320)
Q Consensus       229 ~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~  307 (320)
                      +++...     .+.||+++++.+|+.|+++.+.+.++.+..+.....      .........+|++|++ .+||+| +++
T Consensus       219 ~~~~~~-----~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~------~~~~~~~~~~d~~k~~-~lg~~p~~~~  286 (306)
T PLN02725        219 MRRYSG-----AEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTS------KPDGTPRKLMDSSKLR-SLGWDPKFSL  286 (306)
T ss_pred             Hhcccc-----CcceEeCCCCcccHHHHHHHHHHHhCCCCceeecCC------CCCcccccccCHHHHH-HhCCCCCCCH
Confidence            986422     237899999999999999999999987654321111      1112234678999996 589999 899


Q ss_pred             HHHHHHHHhhhc
Q 020880          308 KDGVKLTLAAEA  319 (320)
Q Consensus       308 ~~~l~~~i~~~~  319 (320)
                      +++|+++++|++
T Consensus       287 ~~~l~~~~~~~~  298 (306)
T PLN02725        287 KDGLQETYKWYL  298 (306)
T ss_pred             HHHHHHHHHHHH
Confidence            999999999976

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=2.6e-41  Score=297.58  Aligned_cols=292  Identities=17%  Similarity=0.173  Sum_probs=211.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      +|+|||||||||||++|+++|+++|   ++|++++|+.+....+....     ...++++.+|++|.+.+.++++   ++
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~---~~   78 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLERG---YTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR---GC   78 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHCC---CEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh---CC
Confidence            6899999999999999999999999   89999888865543322211     1257889999999999888887   79


Q ss_pred             CEEEECCCccCccccccCc-hhhhhccccccHHHHHhhhhhcc-CceEEEeechhhhcccC--CC-CcccCC--------
Q 020880           78 DVVVNCAALSVPRVCENDP-DSAMSINVPSSLVNWLSSFTENK-ENLLIHLSTDQVYEGVK--SF-YKEEDE--------  144 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~-~~~~~~n~~~~~~~~l~~~~~~~-~~~~v~~Ss~~vy~~~~--~~-~~E~~~--------  144 (320)
                      |+|||+|+.....  ..++ ...+++|+.++. +++++|.+.+ +++|||+||.++|+...  .+ ++|+..        
T Consensus        79 d~ViH~A~~~~~~--~~~~~~~~~~~Nv~gt~-~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~  155 (351)
T PLN02650         79 TGVFHVATPMDFE--SKDPENEVIKPTVNGML-SIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRR  155 (351)
T ss_pred             CEEEEeCCCCCCC--CCCchhhhhhHHHHHHH-HHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhc
Confidence            9999999875322  2234 467899999996 9999999876 78999999998876432  23 566632        


Q ss_pred             -CCCcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          145 -IAPVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       145 -~~p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                       ..|.++|+.||..+|.+++.+    +.+++++||+++|||+........+.. .+. .. .+........+.++|+|++
T Consensus       156 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~~r~~v~V~  232 (351)
T PLN02650        156 KKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLIT-ALS-LI-TGNEAHYSIIKQGQFVHLD  232 (351)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHH-HHH-Hh-cCCccccCcCCCcceeeHH
Confidence             234568999999999987664    568899999999999864322222211 111 12 2222222122458999999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhh
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT  299 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  299 (320)
                      |+|++++.+++++..+     +.| ++++..+|+.|+++.+.+.++... +....     ...........+|++|+ +.
T Consensus       233 Dva~a~~~~l~~~~~~-----~~~-i~~~~~~s~~el~~~i~~~~~~~~-~~~~~-----~~~~~~~~~~~~d~~k~-~~  299 (351)
T PLN02650        233 DLCNAHIFLFEHPAAE-----GRY-ICSSHDATIHDLAKMLREKYPEYN-IPARF-----PGIDEDLKSVEFSSKKL-TD  299 (351)
T ss_pred             HHHHHHHHHhcCcCcC-----ceE-EecCCCcCHHHHHHHHHHhCcccC-CCCCC-----CCcCcccccccCChHHH-HH
Confidence            9999999999874322     267 456678999999999999876321 11011     11112234456788997 56


Q ss_pred             cCCCc-cCHHHHHHHHHhhhc
Q 020880          300 LNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       300 lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      |||+| ++++++|+++++|++
T Consensus       300 lG~~p~~~l~egl~~~i~~~~  320 (351)
T PLN02650        300 LGFTFKYSLEDMFDGAIETCR  320 (351)
T ss_pred             hCCCCCCCHHHHHHHHHHHHH
Confidence            99999 899999999999986

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=4.5e-41  Score=292.80  Aligned_cols=290  Identities=18%  Similarity=0.189  Sum_probs=214.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh-----CCCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA-----LPHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      +|+|||||||||||++++++|+++|   ++|+++.|+.+........     ....++++.+|++|++.+.++++   ++
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~   78 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRG---YTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE---GC   78 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh---CC
Confidence            5799999999999999999999999   8999899987654322211     12467889999999999988887   79


Q ss_pred             CEEEECCCccCccccccCc-hhhhhccccccHHHHHhhhhhc-cCceEEEeechhhh--ccc----CCCCcccCCCC---
Q 020880           78 DVVVNCAALSVPRVCENDP-DSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTDQVY--EGV----KSFYKEEDEIA---  146 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~-~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~~vy--~~~----~~~~~E~~~~~---  146 (320)
                      |+|||+|+.....  ..++ ...++.|+.++. +++++|++. +++|||++||.++|  +..    ..+++|+++..   
T Consensus        79 d~vih~A~~~~~~--~~~~~~~~~~~nv~gt~-~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~  155 (322)
T PLN02986         79 DAVFHTASPVFFT--VKDPQTELIDPALKGTI-NVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSL  155 (322)
T ss_pred             CEEEEeCCCcCCC--CCCchhhhhHHHHHHHH-HHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHH
Confidence            9999999975332  2233 356889999996 999999885 78899999998864  322    22577877543   


Q ss_pred             ---CcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 ---PVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 ---p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                         +.+.|+.+|..+|++++++    +.+++++||+++|||......  ......+...+ .+.++  .+++.++|||++
T Consensus       156 ~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~--~~~~~~~~~~~-~g~~~--~~~~~~~~v~v~  230 (322)
T PLN02986        156 CRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTL--NFSVELIVDFI-NGKNL--FNNRFYRFVDVR  230 (322)
T ss_pred             hhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCC--CccHHHHHHHH-cCCCC--CCCcCcceeEHH
Confidence               3578999999999987764    568899999999999764221  11223344433 34433  356678999999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhh
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT  299 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  299 (320)
                      |+|++++++++++..+     +.||++ ++.+|++|+++.+.+.++. ..+.    .. .+..........+|++|++. 
T Consensus       231 Dva~a~~~al~~~~~~-----~~yni~-~~~~s~~e~~~~i~~~~~~-~~~~----~~-~~~~~~~~~~~~~d~~~~~~-  297 (322)
T PLN02986        231 DVALAHIKALETPSAN-----GRYIID-GPIMSVNDIIDILRELFPD-LCIA----DT-NEESEMNEMICKVCVEKVKN-  297 (322)
T ss_pred             HHHHHHHHHhcCcccC-----CcEEEe-cCCCCHHHHHHHHHHHCCC-CCCC----CC-CccccccccCCccCHHHHHH-
Confidence            9999999999875332     379995 5689999999999999873 1111    10 01111111223589999855 


Q ss_pred             cCCCccCHHHHHHHHHhhhc
Q 020880          300 LNIDPVTYKDGVKLTLAAEA  319 (320)
Q Consensus       300 lg~~~~~~~~~l~~~i~~~~  319 (320)
                      |||+|++++|+|+++++|++
T Consensus       298 lg~~~~~l~e~~~~~~~~~~  317 (322)
T PLN02986        298 LGVEFTPMKSSLRDTILSLK  317 (322)
T ss_pred             cCCcccCHHHHHHHHHHHHH
Confidence            99999999999999999985

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=1.3e-40  Score=289.16  Aligned_cols=295  Identities=23%  Similarity=0.286  Sum_probs=218.8

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH-HhCCCCEEEECC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL-KFGQPDVVVNCA   84 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~~~~d~Vih~a   84 (320)
                      |||||||||||+++++.|+++|+  .+|+++.|..... .+.. ..  ...+..|+.+.+.++.+.+ .+.++|+|||||
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~--~~v~~~~~~~~~~-~~~~-~~--~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A   74 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGI--TDILVVDNLRDGH-KFLN-LA--DLVIADYIDKEDFLDRLEKGAFGKIEAIFHQG   74 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCC--ceEEEEecCCCch-hhhh-hh--heeeeccCcchhHHHHHHhhccCCCCEEEECc
Confidence            69999999999999999999993  2687777654322 1111 11  1246678888777666554 123899999999


Q ss_pred             CccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCC-CCCcchHHHHHHHHHHHHH
Q 020880           85 ALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDE-IAPVNVYGKSKVAAEKFIY  163 (320)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~-~~p~~~Y~~sK~~~e~~~~  163 (320)
                      +....  ...++...+++|+.++. +++++|.+.++ +|||+||.++|+....+++|+++ ..|.+.|+.+|..+|.+++
T Consensus        75 ~~~~~--~~~~~~~~~~~n~~~~~-~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~  150 (314)
T TIGR02197        75 ACSDT--TETDGEYMMENNYQYSK-RLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVR  150 (314)
T ss_pred             cccCc--cccchHHHHHHHHHHHH-HHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHH
Confidence            97533  34467788899999996 99999999887 89999999999977667777765 4588899999999999987


Q ss_pred             HH------cCCeeEEeecccccCCCCCCCC-CCChHHHHHHHHhcCCceEeec--------CcccCceeHHHHHHHHHHH
Q 020880          164 EK------CSNFAILRSSIIYGPQTISPVP-KSLPIQWIDSVLSKGEKVEFFH--------DECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       164 ~~------~~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~v~D~a~~~~~~  228 (320)
                      ++      ..+++++||+++|||+...... ..++..++..+. .+.++.+++        ++.++|+|++|+++++..+
T Consensus       151 ~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~  229 (314)
T TIGR02197       151 RRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIK-AGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWL  229 (314)
T ss_pred             HHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHh-cCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHH
Confidence            63      2378999999999998642211 223333444433 455555532        3468999999999999999


Q ss_pred             HhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCH
Q 020880          229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTY  307 (320)
Q Consensus       229 ~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~  307 (320)
                      +.+ ..     +++||+++++++|++|+++.+.+.+|.+..+. ..+.+... .........+|++|+++++||+| +++
T Consensus       230 ~~~-~~-----~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~-~~~~~~~~~~~~~k~~~~l~~~p~~~l  301 (314)
T TIGR02197       230 LEN-GV-----SGIFNLGTGRARSFNDLADAVFKALGKDEKIE-YIPMPEAL-RGKYQYFTQADITKLRAAGYYGPFTTL  301 (314)
T ss_pred             Hhc-cc-----CceEEcCCCCCccHHHHHHHHHHHhCCCCcce-eccCcccc-ccccccccccchHHHHHhcCCCCcccH
Confidence            987 22     34999999999999999999999999765321 11211111 00112345789999999999999 999


Q ss_pred             HHHHHHHHhhhc
Q 020880          308 KDGVKLTLAAEA  319 (320)
Q Consensus       308 ~~~l~~~i~~~~  319 (320)
                      +++|+++++|+.
T Consensus       302 ~~~l~~~~~~~~  313 (314)
T TIGR02197       302 EEGVKDYVQWLL  313 (314)
T ss_pred             HHHHHHHHHHHh
Confidence            999999999985

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.4e-40  Score=293.02  Aligned_cols=294  Identities=19%  Similarity=0.181  Sum_probs=209.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC--CCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      .|+||||||+||||++++++|+++|   ++|+++.|+.++...+...+  ..+++++.+|++|.+.+.++++   ++|+|
T Consensus        10 ~~~vLVtG~~GfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~V   83 (353)
T PLN02896         10 TGTYCVTGATGYIGSWLVKLLLQRG---YTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK---GCDGV   83 (353)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc---CCCEE
Confidence            5799999999999999999999999   89999888865544433322  2457889999999998888776   79999


Q ss_pred             EECCCccCccc--cccCchhhhhcc-----ccccHHHHHhhhhhcc-CceEEEeechhhhcccC------CCCcccCC--
Q 020880           81 VNCAALSVPRV--CENDPDSAMSIN-----VPSSLVNWLSSFTENK-ENLLIHLSTDQVYEGVK------SFYKEEDE--  144 (320)
Q Consensus        81 ih~a~~~~~~~--~~~~~~~~~~~n-----~~~~~~~~l~~~~~~~-~~~~v~~Ss~~vy~~~~------~~~~E~~~--  144 (320)
                      ||+|+......  ...+++..++.|     +.+++ +++++|++.+ +++||++||.++||...      .+++|+.+  
T Consensus        84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~-~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p  162 (353)
T PLN02896         84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTL-NVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTP  162 (353)
T ss_pred             EECCccccCCccccccchhhhhhHHhHHHHHHHHH-HHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCc
Confidence            99999865432  233455544444     57885 9999998875 78999999999998431      35677632  


Q ss_pred             C-------CCcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCc--eEeec-C
Q 020880          145 I-------APVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEK--VEFFH-D  210 (320)
Q Consensus       145 ~-------~p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~  210 (320)
                      .       .|.++|+.||.++|++++.+    +.+++++||++||||+.....+ ..+..++ ..+ .+..  +...+ .
T Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~-~~~~~~~-~~~-~g~~~~~~~~~~~  239 (353)
T PLN02896        163 IDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVP-SSIQVLL-SPI-TGDSKLFSILSAV  239 (353)
T ss_pred             HHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCC-chHHHHH-HHh-cCCcccccccccc
Confidence            1       24458999999999988765    4578999999999998643221 1121222 112 2322  11111 1


Q ss_pred             ----cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCC
Q 020880          211 ----ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP  286 (320)
Q Consensus       211 ----~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (320)
                          +.++|||++|+|++++.+++.+..     ++.|++ ++..+|++|+++.+.+.++.........+     ......
T Consensus       240 ~~~~~~~dfi~v~Dva~a~~~~l~~~~~-----~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~-----~~~~~~  308 (353)
T PLN02896        240 NSRMGSIALVHIEDICDAHIFLMEQTKA-----EGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRLDE-----EKRGSI  308 (353)
T ss_pred             ccccCceeEEeHHHHHHHHHHHHhCCCc-----CccEEe-cCCCCCHHHHHHHHHHhCCCCCccccccc-----cccCcc
Confidence                246999999999999999986322     236765 56789999999999999874311111111     011111


Q ss_pred             CccccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          287 ADISMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       287 ~~~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                       ...+|++|++ .|||+| ++++++|+++++|++
T Consensus       309 -~~~~~~~~~~-~lGw~p~~~l~~~i~~~~~~~~  340 (353)
T PLN02896        309 -PSEISSKKLR-DLGFEYKYGIEEIIDQTIDCCV  340 (353)
T ss_pred             -ccccCHHHHH-HcCCCccCCHHHHHHHHHHHHH
Confidence             2356889986 599999 899999999999986

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=1.8e-39  Score=283.63  Aligned_cols=303  Identities=23%  Similarity=0.284  Sum_probs=226.8

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC--CcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--HSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||||||||||||++++++|+++|   ++|++..|.............  ..++++.+|+.+++++.++++. .++|+|||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~d~vv~   76 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESG---HEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE-HKIDAVIH   76 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCC---CeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh-CCCcEEEE
Confidence            58999999999999999999999   788877654332211111111  1466789999999999888875 37999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKF  161 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~e~~  161 (320)
                      +||.........++...++.|+.++. +++++|.+.+++++|++||.++|+.... +++|+++..|.+.|+.+|..+|.+
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~  155 (328)
T TIGR01179        77 FAGLIAVGESVQDPLKYYRNNVVNTL-NLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERI  155 (328)
T ss_pred             CccccCcchhhcCchhhhhhhHHHHH-HHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHH
Confidence            99976544444566778899999996 9999999998889999999999986544 789999988999999999999998


Q ss_pred             HHHH-----cCCeeEEeecccccCCCCCCC------CCCChHHHHHHHHhcCCceEeec--------CcccCceeHHHHH
Q 020880          162 IYEK-----CSNFAILRSSIIYGPQTISPV------PKSLPIQWIDSVLSKGEKVEFFH--------DECRCPVYVRDVV  222 (320)
Q Consensus       162 ~~~~-----~~~~~ilR~~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~v~D~a  222 (320)
                      ++.+     +.+++++||+.+||+......      ...++..+.........++.+.+        +..++|||++|++
T Consensus       156 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a  235 (328)
T TIGR01179       156 LRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLA  235 (328)
T ss_pred             HHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHH
Confidence            8764     457899999999998643211      11122222222221334444332        3568999999999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI  302 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~  302 (320)
                      +++..++.....  ...+++||+++++.+|++|+++.+.+.+|.+..+.. .+     ...........|++|++++|||
T Consensus       236 ~~~~~~~~~~~~--~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~lg~  307 (328)
T TIGR01179       236 DAHLAALEYLLN--GGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVEL-AP-----RRPGDPASLVADASKIRRELGW  307 (328)
T ss_pred             HHHHHHHhhhhc--CCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEe-CC-----CCCccccchhcchHHHHHHhCC
Confidence            999999976321  123469999999999999999999999998754321 11     1111223456799999999999


Q ss_pred             Cc-cC-HHHHHHHHHhhhcC
Q 020880          303 DP-VT-YKDGVKLTLAAEAT  320 (320)
Q Consensus       303 ~~-~~-~~~~l~~~i~~~~~  320 (320)
                      +| ++ ++++|+++++|+++
T Consensus       308 ~p~~~~l~~~~~~~~~~~~~  327 (328)
T TIGR01179       308 QPKYTDLEIIIKTAWRWESR  327 (328)
T ss_pred             CCCcchHHHHHHHHHHHHhc
Confidence            99 66 99999999999864

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=5.7e-40  Score=277.59  Aligned_cols=251  Identities=23%  Similarity=0.253  Sum_probs=196.8

Q ss_pred             EEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh-hhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEECCC
Q 020880            7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-LLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAA   85 (320)
Q Consensus         7 lItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a~   85 (320)
                      |||||+||||++|+++|+++|+. ++|..+++.+.... ...... +...++.+|++|++++.++++   ++|+|||+|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~-~~Vr~~d~~~~~~~~~~~~~~-~~~~~~~~Di~d~~~l~~a~~---g~d~V~H~Aa   75 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYI-YEVRVLDRSPPPKFLKDLQKS-GVKEYIQGDITDPESLEEALE---GVDVVFHTAA   75 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCc-eEEEEcccccccccchhhhcc-cceeEEEeccccHHHHHHHhc---CCceEEEeCc
Confidence            69999999999999999999963 78888888765433 111221 233489999999999999998   8999999999


Q ss_pred             ccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhccc---CCC--CcccCCC--CCcchHHHHHHHH
Q 020880           86 LSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV---KSF--YKEEDEI--APVNVYGKSKVAA  158 (320)
Q Consensus        86 ~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~---~~~--~~E~~~~--~p~~~Y~~sK~~~  158 (320)
                      ...... ...++..+++|+.||. +++++|++.+++++||+||..++++.   ...  .+|+.+.  .+...|+.||.++
T Consensus        76 ~~~~~~-~~~~~~~~~vNV~GT~-nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~A  153 (280)
T PF01073_consen   76 PVPPWG-DYPPEEYYKVNVDGTR-NVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALA  153 (280)
T ss_pred             cccccC-cccHHHHHHHHHHHHH-HHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHH
Confidence            865432 3456789999999995 99999999999999999999998862   222  3566553  3667999999999


Q ss_pred             HHHHHHHcC---------CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHH
Q 020880          159 EKFIYEKCS---------NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILA  227 (320)
Q Consensus       159 e~~~~~~~~---------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~  227 (320)
                      |+++++...         .+++|||+.||||++....      ..+......+......|+  ...+++|++|+|.++++
T Consensus       154 E~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~------~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvl  227 (280)
T PF01073_consen  154 EKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLV------PRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVL  227 (280)
T ss_pred             HHHHHhhcccccccccceeEEEEeccEEeCccccccc------chhhHHHHhcccceeecCCCceECcEeHHHHHHHHHH
Confidence            999988643         5689999999999874322      123334445644444454  47999999999999999


Q ss_pred             HHhhhhcc---ccccCceeEecCCCCcC-HHHHHHHHHHHhCCCCCc
Q 020880          228 LTNRWLSE---DKQMQLLLNVGGPDRVS-RVQMAEVVAEIRGYSTSL  270 (320)
Q Consensus       228 ~~~~~~~~---~~~~~~~~n~~~~~~~s-~~e~~~~i~~~~~~~~~~  270 (320)
                      +++.....   ....++.|++.++++.+ +.|+...+.+.+|.+.+.
T Consensus       228 A~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~  274 (280)
T PF01073_consen  228 AAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK  274 (280)
T ss_pred             HHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence            88765433   34567899999999998 999999999999988764

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=4.9e-39  Score=280.99  Aligned_cols=293  Identities=19%  Similarity=0.154  Sum_probs=223.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|+||||+||||+++++.|+++|   ++|+++.|+++....+.   ...++++.+|++|.+++.++++   ++|+|||+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~---~~~~~~~~~D~~~~~~l~~~~~---~~d~vi~~   71 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQG---EEVRVLVRPTSDRRNLE---GLDVEIVEGDLRDPASLRKAVA---GCRALFHV   71 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCC---CEEEEEEecCccccccc---cCCceEEEeeCCCHHHHHHHHh---CCCEEEEe
Confidence            479999999999999999999999   89999999865533221   1257789999999998888877   89999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhccc--CCCCcccCCCCC---cchHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV--KSFYKEEDEIAP---VNVYGKSKVAA  158 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~--~~~~~E~~~~~p---~~~Y~~sK~~~  158 (320)
                      |+....  ...+++..++.|+.++. ++++++.+.+++++|++||.++|+..  ..+++|+++..|   .+.|+.+|..+
T Consensus        72 a~~~~~--~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~  148 (328)
T TIGR03466        72 AADYRL--WAPDPEEMYAANVEGTR-NLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLA  148 (328)
T ss_pred             ceeccc--CCCCHHHHHHHHHHHHH-HHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHH
Confidence            986422  23467888999999996 99999999999999999999999853  347888887665   45899999999


Q ss_pred             HHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhc
Q 020880          159 EKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS  234 (320)
Q Consensus       159 e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  234 (320)
                      |++++.+    +.+++++||+++||++.....   ....++......+.+  ...+..++|+|++|+|++++.++++...
T Consensus       149 e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~i~v~D~a~a~~~~~~~~~~  223 (328)
T TIGR03466       149 EQAALEMAAEKGLPVVIVNPSTPIGPRDIKPT---PTGRIIVDFLNGKMP--AYVDTGLNLVHVDDVAEGHLLALERGRI  223 (328)
T ss_pred             HHHHHHHHHhcCCCEEEEeCCccCCCCCCCCC---cHHHHHHHHHcCCCc--eeeCCCcceEEHHHHHHHHHHHHhCCCC
Confidence            9988875    567899999999999863221   112334444433322  2334457899999999999999987432


Q ss_pred             cccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccc--------------cCCCCC--------CCCccccC
Q 020880          235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASS--------------VDRGVQ--------SPADISMD  292 (320)
Q Consensus       235 ~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~--------------~~~~~~--------~~~~~~~d  292 (320)
                           +..|+++ ++.+|+.|+++.+.+.+|.+.+.. ..+...              ....+.        ......+|
T Consensus       224 -----~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  296 (328)
T TIGR03466       224 -----GERYILG-GENLTLKQILDKLAEITGRPAPRV-KLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFS  296 (328)
T ss_pred             -----CceEEec-CCCcCHHHHHHHHHHHhCCCCCCC-cCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCC
Confidence                 3478885 688999999999999999765432 222110              000000        01356789


Q ss_pred             hHHHHhhcCCCccCHHHHHHHHHhhhcC
Q 020880          293 ITKLVQTLNIDPVTYKDGVKLTLAAEAT  320 (320)
Q Consensus       293 ~~k~~~~lg~~~~~~~~~l~~~i~~~~~  320 (320)
                      ++|+++.|||+|++++++|++++.|++.
T Consensus       297 ~~k~~~~lg~~p~~~~~~i~~~~~~~~~  324 (328)
T TIGR03466       297 SAKAVRELGYRQRPAREALRDAVEWFRA  324 (328)
T ss_pred             hHHHHHHcCCCCcCHHHHHHHHHHHHHH
Confidence            9999999999999999999999999863

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=8.3e-39  Score=283.77  Aligned_cols=280  Identities=16%  Similarity=0.168  Sum_probs=211.9

Q ss_pred             CcEEEEE----cCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhh-------hhC-CCcceEEEeeCCCcccHHHH
Q 020880            3 KKRVLVV----GGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL-------DAL-PHSFVFFDVDLKSGSGFDAV   70 (320)
Q Consensus         3 ~~~ilIt----GatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dl~d~~~~~~~   70 (320)
                      +|+||||    |||||||++|+++|+++|   ++|++++|+......+.       ..+ ..+++++.+|+.|   +.++
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G---~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAG---HEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCC---CEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhh
Confidence            5789999    999999999999999999   89999999875432211       011 1347889999987   4444


Q ss_pred             HHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcc
Q 020880           71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVN  149 (320)
Q Consensus        71 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~  149 (320)
                      +.. .++|+|||+++..                ..++ .+++++|++.|+++|||+||.++|+.... +..|+++..|.+
T Consensus       126 ~~~-~~~d~Vi~~~~~~----------------~~~~-~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~  187 (378)
T PLN00016        126 VAG-AGFDVVYDNNGKD----------------LDEV-EPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA  187 (378)
T ss_pred             hcc-CCccEEEeCCCCC----------------HHHH-HHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc
Confidence            432 3799999997531                1233 48999999999999999999999996543 677887776654


Q ss_pred             hHHHHHHHHHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHH
Q 020880          150 VYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILA  227 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~  227 (320)
                          +|..+|.++++.+.+++++||+.+||++....    .. .++...+..+.++.++++  +.++|+|++|+|++++.
T Consensus       188 ----sK~~~E~~l~~~~l~~~ilRp~~vyG~~~~~~----~~-~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~  258 (378)
T PLN00016        188 ----GHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKD----CE-EWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFAL  258 (378)
T ss_pred             ----hHHHHHHHHHHcCCCeEEEeceeEECCCCCCc----hH-HHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHH
Confidence                89999999999889999999999999976321    12 233333446777777654  57899999999999999


Q ss_pred             HHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccc-cC---CCCCCCCccccChHHHHhhcCCC
Q 020880          228 LTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASS-VD---RGVQSPADISMDITKLVQTLNID  303 (320)
Q Consensus       228 ~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~d~~k~~~~lg~~  303 (320)
                      +++++..    .+++||+++++.+|+.|+++.+.+.+|.+..+....+... ..   ..+.....+..|++|++++|||+
T Consensus       259 ~l~~~~~----~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw~  334 (378)
T PLN00016        259 VVGNPKA----AGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGWT  334 (378)
T ss_pred             HhcCccc----cCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccCccccccccccccccccCHHHHHHhcCCC
Confidence            9987432    2459999999999999999999999998764432222111 00   01112344567999999999999


Q ss_pred             c-cCHHHHHHHHHhhhc
Q 020880          304 P-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       304 ~-~~~~~~l~~~i~~~~  319 (320)
                      | ++++|+|+++++|++
T Consensus       335 p~~~l~egl~~~~~~~~  351 (378)
T PLN00016        335 PKFDLVEDLKDRYELYF  351 (378)
T ss_pred             CCCCHHHHHHHHHHHHH
Confidence            9 899999999999975

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=2.3e-38  Score=279.16  Aligned_cols=285  Identities=17%  Similarity=0.151  Sum_probs=208.9

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh--------CCCcceEEEeeCCCcccHHHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA--------LPHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      |++|+||||||+||||++++++|+++|   ++|+++.|+.+....+...        ....+.++.+|++|.+++.++++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G---~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHG---YSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            457899999999999999999999999   8898888875543332111        01247788999999999988887


Q ss_pred             HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeech--hhhccc---C--CCCcccC-
Q 020880           73 KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTD--QVYEGV---K--SFYKEED-  143 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~--~vy~~~---~--~~~~E~~-  143 (320)
                         ++|.|||+|+...+......+....+.|+.++. +++++|++. +++|+||+||.  .+|+..   .  ..++|++ 
T Consensus       128 ---~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~-~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~  203 (367)
T PLN02686        128 ---GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASE-NVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESW  203 (367)
T ss_pred             ---hccEEEecCeeecccccccccchhhhhhHHHHH-HHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCC
Confidence               789999999986543211122455678999995 999999986 79999999996  477641   1  2356654 


Q ss_pred             -----CCCCcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          144 -----EIAPVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       144 -----~~~p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                           +..|.++|+.+|..+|++++.+    +.+++++||++||||+.......    ..+ ..+ .+. +.++|++.++
T Consensus       204 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~----~~~-~~~-~g~-~~~~g~g~~~  276 (367)
T PLN02686        204 SDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNST----ATI-AYL-KGA-QEMLADGLLA  276 (367)
T ss_pred             CChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCCh----hHH-HHh-cCC-CccCCCCCcC
Confidence                 3456778999999999988754    56889999999999985321111    112 233 333 4566777778


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCC-CCCCCccccCh
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRG-VQSPADISMDI  293 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~  293 (320)
                      |+||+|+|++++.+++....+  ..+++| +++++.+|++|+++.+.+.+|.+......      ... ..+...+.+|+
T Consensus       277 ~v~V~Dva~A~~~al~~~~~~--~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~------~~~~~~d~~~~~~d~  347 (367)
T PLN02686        277 TADVERLAEAHVCVYEAMGNK--TAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAG------NSSSDDTPARFELSN  347 (367)
T ss_pred             eEEHHHHHHHHHHHHhccCCC--CCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCC------chhhcCCcccccccH
Confidence            999999999999999853111  123478 77889999999999999999876443211      111 23566788999


Q ss_pred             HHHHhhcCCCc-cCHH
Q 020880          294 TKLVQTLNIDP-VTYK  308 (320)
Q Consensus       294 ~k~~~~lg~~~-~~~~  308 (320)
                      +|++++|||.| -.++
T Consensus       348 ~kl~~~l~~~~~~~~~  363 (367)
T PLN02686        348 KKLSRLMSRTRRCCYD  363 (367)
T ss_pred             HHHHHHHHHhhhcccc
Confidence            99999999998 4433

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=1.5e-37  Score=270.02  Aligned_cols=272  Identities=18%  Similarity=0.258  Sum_probs=205.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-CCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-PHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |++|+||||||+||||++++++|+++|.. ++|++++|+......+.... ..++.++.+|++|++.+.++++   ++|+
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~---~iD~   77 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNP-KKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR---GVDY   77 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCC-cEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh---cCCE
Confidence            35789999999999999999999998622 57888888765433332222 2357889999999999888876   7999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAE  159 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e  159 (320)
                      |||+||....+.+..++...+++|+.++. +++++|.+.++++||++||...             ..|.++|+.+|..+|
T Consensus        78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~-~ll~aa~~~~~~~iV~~SS~~~-------------~~p~~~Y~~sK~~~E  143 (324)
T TIGR03589        78 VVHAAALKQVPAAEYNPFECIRTNINGAQ-NVIDAAIDNGVKRVVALSTDKA-------------ANPINLYGATKLASD  143 (324)
T ss_pred             EEECcccCCCchhhcCHHHHHHHHHHHHH-HHHHHHHHcCCCEEEEEeCCCC-------------CCCCCHHHHHHHHHH
Confidence            99999986555455677889999999996 9999999999889999999642             345678999999999


Q ss_pred             HHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCC-ceEee-cCcccCceeHHHHHHHHHHHHh
Q 020880          160 KFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGE-KVEFF-HDECRCPVYVRDVVKIILALTN  230 (320)
Q Consensus       160 ~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~i~v~D~a~~~~~~~~  230 (320)
                      .+++.+       +.+++++||++||||+.      .++. ++......+. ++++. ++..|+|+|++|+|++++.+++
T Consensus       144 ~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~------~~i~-~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~  216 (324)
T TIGR03589       144 KLFVAANNISGSKGTRFSVVRYGNVVGSRG------SVVP-FFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLE  216 (324)
T ss_pred             HHHHHHHhhccccCcEEEEEeecceeCCCC------CcHH-HHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHh
Confidence            988652       46789999999999864      1333 3333444454 56664 3467899999999999999998


Q ss_pred             hhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCC-CCccccChHHHHhhcCCCc-cCHH
Q 020880          231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQS-PADISMDITKLVQTLNIDP-VTYK  308 (320)
Q Consensus       231 ~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~k~~~~lg~~~-~~~~  308 (320)
                      +...     +++|+ +++..+++.|+++.+.+..+..  ..        ...... .....+|++|++++|||+| ++++
T Consensus       217 ~~~~-----~~~~~-~~~~~~sv~el~~~i~~~~~~~--~~--------~~~~g~~~~~~~~~~~~~~~~lg~~~~~~l~  280 (324)
T TIGR03589       217 RMLG-----GEIFV-PKIPSMKITDLAEAMAPECPHK--IV--------GIRPGEKLHEVMITEDDARHTYELGDYYAIL  280 (324)
T ss_pred             hCCC-----CCEEc-cCCCcEEHHHHHHHHHhhCCee--Ee--------CCCCCchhHhhhcChhhhhhhcCCCCeEEEc
Confidence            6321     33774 6667799999999998864321  10        111111 2335689999999999999 9999


Q ss_pred             HHHHH
Q 020880          309 DGVKL  313 (320)
Q Consensus       309 ~~l~~  313 (320)
                      ++++.
T Consensus       281 ~~~~~  285 (324)
T TIGR03589       281 PSISF  285 (324)
T ss_pred             ccccc
Confidence            99863

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=9.4e-37  Score=259.03  Aligned_cols=306  Identities=25%  Similarity=0.265  Sum_probs=235.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      .+.+++||||+||+|+||+++|++++.. .+|...+..+.......+.   ....++++.+|+.|..++..++.   ++ 
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~-~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~---~~-   77 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELK-LEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ---GA-   77 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccc-cEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc---Cc-
Confidence            4679999999999999999999999854 7888888776422211111   25678888999999988888776   88 


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-C-CcccCC--CCCcchHHHH
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-F-YKEEDE--IAPVNVYGKS  154 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~-~~E~~~--~~p~~~Y~~s  154 (320)
                      .|+|||+...+.....+++..+++|+.||. +++++|.+.+++++||+||..|..+.+. . -+|+.|  .....+|+.|
T Consensus        78 ~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~-nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~s  156 (361)
T KOG1430|consen   78 VVVHCAASPVPDFVENDRDLAMRVNVNGTL-NVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGES  156 (361)
T ss_pred             eEEEeccccCccccccchhhheeecchhHH-HHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchH
Confidence            899999887777666789999999999995 9999999999999999999999776555 2 345544  3344699999


Q ss_pred             HHHHHHHHHHHc----CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHH
Q 020880          155 KVAAEKFIYEKC----SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       155 K~~~e~~~~~~~----~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~  228 (320)
                      |..+|+++++.+    ..+++|||+.||||++....      ..+..+++.+......++  ...++++++.++.+++.+
T Consensus       157 Ka~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~------~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA  230 (361)
T KOG1430|consen  157 KALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLL------PKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILA  230 (361)
T ss_pred             HHHHHHHHHHhcCCCCeeEEEEccccccCCCCcccc------HHHHHHHHccCceEEeeccccccceEEechhHHHHHHH
Confidence            999999999876    34799999999999984222      234455666766666554  578899999999999888


Q ss_pred             Hhhhh-ccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccc--------------cC-CCCC--------
Q 020880          229 TNRWL-SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASS--------------VD-RGVQ--------  284 (320)
Q Consensus       229 ~~~~~-~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~--------------~~-~~~~--------  284 (320)
                      ..... ......+++|++.++.++...++...+.+.+|...+.....|...              .. ..+.        
T Consensus       231 ~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~  310 (361)
T KOG1430|consen  231 ARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVAL  310 (361)
T ss_pred             HHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheee
Confidence            77665 334456789999999999888888899999998876211111110              00 0110        


Q ss_pred             CCCccccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          285 SPADISMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       285 ~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      ......+++.|+++.|||+| .++++++.+++.|..
T Consensus       311 ~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~  346 (361)
T KOG1430|consen  311 LGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVA  346 (361)
T ss_pred             eccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHh
Confidence            12456799999999999999 999999999998753

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=6.9e-37  Score=254.98  Aligned_cols=229  Identities=27%  Similarity=0.347  Sum_probs=189.6

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEECCC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAA   85 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a~   85 (320)
                      |||||||||||++++++|+++|   +.|+.+.|+...........  +++++.+|+.|.+.+.++++.. ++|+|||+|+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g---~~v~~~~~~~~~~~~~~~~~--~~~~~~~dl~~~~~~~~~~~~~-~~d~vi~~a~   74 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKG---HEVIVLSRSSNSESFEEKKL--NVEFVIGDLTDKEQLEKLLEKA-NIDVVIHLAA   74 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT---TEEEEEESCSTGGHHHHHHT--TEEEEESETTSHHHHHHHHHHH-TESEEEEEBS
T ss_pred             EEEEccCCHHHHHHHHHHHHcC---Cccccccccccccccccccc--eEEEEEeecccccccccccccc-CceEEEEeec
Confidence            7999999999999999999999   78888888876654433322  6888999999999999999875 7899999999


Q ss_pred             ccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhccc-CCCCcccCCCCCcchHHHHHHHHHHHHHH
Q 020880           86 LSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYE  164 (320)
Q Consensus        86 ~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~-~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~  164 (320)
                      ....+....++...++.|+.++. +++++|++.+++++|++||..+|+.. ..+++|+++..|.++|+.+|...|+++++
T Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~-~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~  153 (236)
T PF01370_consen   75 FSSNPESFEDPEEIIEANVQGTR-NLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRD  153 (236)
T ss_dssp             SSSHHHHHHSHHHHHHHHHHHHH-HHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            86433333577888999999985 99999999999999999999999987 44889999999999999999999998887


Q ss_pred             H----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHhhhhccccc
Q 020880          165 K----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRWLSEDKQ  238 (320)
Q Consensus       165 ~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~~  238 (320)
                      +    +.+++++||+++|||.........++..++..+. .++++.++++  +.++|+|++|+|++++.+++++.    .
T Consensus       154 ~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~----~  228 (236)
T PF01370_consen  154 YAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQAL-KGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPK----A  228 (236)
T ss_dssp             HHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHH-TTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSC----T
T ss_pred             cccccccccccccccccccccccccccccccchhhHHhh-cCCcccccCCCCCccceEEHHHHHHHHHHHHhCCC----C
Confidence            5    5689999999999999322334455555555544 6777777764  68999999999999999999965    2


Q ss_pred             cCceeEec
Q 020880          239 MQLLLNVG  246 (320)
Q Consensus       239 ~~~~~n~~  246 (320)
                      .+++||++
T Consensus       229 ~~~~yNig  236 (236)
T PF01370_consen  229 AGGIYNIG  236 (236)
T ss_dssp             TTEEEEES
T ss_pred             CCCEEEeC
Confidence            35599985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.7e-36  Score=234.29  Aligned_cols=284  Identities=17%  Similarity=0.138  Sum_probs=222.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||||||||++|.+|+++.+.+.++|.+ -+-+.+..+                 -.+||++.++.+++++.. .+.+|||
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~-~e~wvf~~s-----------------kd~DLt~~a~t~~lF~~e-kPthVIh   61 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFD-DENWVFIGS-----------------KDADLTNLADTRALFESE-KPTHVIH   61 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCC-CcceEEecc-----------------ccccccchHHHHHHHhcc-CCceeee
Confidence            589999999999999999999999832 122222222                 367999999999999874 9999999


Q ss_pred             CCCccCc-cccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCC----CCC-cchHHHHH
Q 020880           83 CAALSVP-RVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDE----IAP-VNVYGKSK  155 (320)
Q Consensus        83 ~a~~~~~-~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~----~~p-~~~Y~~sK  155 (320)
                      +|+.... ......+...++.|+.-. .|++..|.+.|++++|++.|+|+|.+... |++|...    +.| .-.|+.+|
T Consensus        62 lAAmVGGlf~N~~ynldF~r~Nl~in-dNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAK  140 (315)
T KOG1431|consen   62 LAAMVGGLFHNNTYNLDFIRKNLQIN-DNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAK  140 (315)
T ss_pred             hHhhhcchhhcCCCchHHHhhcceec-hhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHH
Confidence            9998754 234456788899999877 39999999999999999999999986544 9999863    333 34789999


Q ss_pred             HHHHHHH----HHHcCCeeEEeecccccCCCCCCC-CCCChHHHHHH---HHhcCC-ceEeecCc--ccCceeHHHHHHH
Q 020880          156 VAAEKFI----YEKCSNFAILRSSIIYGPQTISPV-PKSLPIQWIDS---VLSKGE-KVEFFHDE--CRCPVYVRDVVKI  224 (320)
Q Consensus       156 ~~~e~~~----~~~~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~---~~~~~~-~~~~~~~~--~~~~i~v~D~a~~  224 (320)
                      .++.-..    .+++..++.+-|.++|||+++... ..+.++.+|.+   +..+|. ++.++|.+  .|+|||++|+|++
T Consensus       141 r~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l  220 (315)
T KOG1431|consen  141 RMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADL  220 (315)
T ss_pred             HHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHH
Confidence            8877544    445678899999999999986443 34444444443   233455 88899875  8999999999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCC--CcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCC
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPD--RVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI  302 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~--~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~  302 (320)
                      +++++.+...-+     .++++.++  .+|++|+++++.+++++...+.....+++.      .....+|++|+++ |+|
T Consensus       221 ~i~vlr~Y~~vE-----piils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DG------q~kKtasnsKL~s-l~p  288 (315)
T KOG1431|consen  221 FIWVLREYEGVE-----PIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSDG------QFKKTASNSKLRS-LLP  288 (315)
T ss_pred             HHHHHHhhcCcc-----ceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCCC------CcccccchHHHHH-hCC
Confidence            999999864433     67888887  899999999999999999887765554443      3346799999966 788


Q ss_pred             Cc--cCHHHHHHHHHhhh
Q 020880          303 DP--VTYKDGVKLTLAAE  318 (320)
Q Consensus       303 ~~--~~~~~~l~~~i~~~  318 (320)
                      .|  ++++++|.++++|+
T Consensus       289 d~~ft~l~~ai~~t~~Wy  306 (315)
T KOG1431|consen  289 DFKFTPLEQAISETVQWY  306 (315)
T ss_pred             CcccChHHHHHHHHHHHH
Confidence            87  67999999999997

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=5.6e-36  Score=239.39  Aligned_cols=304  Identities=18%  Similarity=0.128  Sum_probs=230.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh-h---hhhh---CCCcceEEEeeCCCcccHHHHHHHh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-L---LLDA---LPHSFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~-~---~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      ++|+.||||-||+-|++|++.|+++|   |+|+++.|+.+... .   +...   -..+++++.+|++|...+..+++.+
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekG---Y~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKG---YEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcC---cEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc
Confidence            36899999999999999999999999   99999999844321 1   1111   1234888999999999999999987


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccC--ceEEEeechhhhcccCC-CCcccCCCCCcchH
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE--NLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVY  151 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y  151 (320)
                       +||-|+|+|+.++...+...|+...+++..|++ ++|++.+..+.  .||.+.||+..||.... |.+|.+|..|.+||
T Consensus        78 -~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtl-rlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPY  155 (345)
T COG1089          78 -QPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTL-RLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPY  155 (345)
T ss_pred             -CchhheeccccccccccccCcceeeeechhHHH-HHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHH
Confidence             999999999999999999999999999999997 99999998653  48999999999996654 89999999999999


Q ss_pred             HHHHHHHHHHHHHHcCCe----eEEeecccccCCCCCCCCCCChHHHHHHHHhcCCc-eEeecC--cccCceeHHHHHHH
Q 020880          152 GKSKVAAEKFIYEKCSNF----AILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEK-VEFFHD--ECRCPVYVRDVVKI  224 (320)
Q Consensus       152 ~~sK~~~e~~~~~~~~~~----~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~i~v~D~a~~  224 (320)
                      +.+|.-+--+...|...+    +.=+.++-=+|.....+..+.+...+.+ ++.|.. -...|+  .+|||-|+.|-+++
T Consensus       156 AvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~-Ik~G~q~~l~lGNldAkRDWG~A~DYVe~  234 (345)
T COG1089         156 AVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVAR-IKLGLQDKLYLGNLDAKRDWGHAKDYVEA  234 (345)
T ss_pred             HHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHH-HHccccceEEeccccccccccchHHHHHH
Confidence            999999998776665444    3344444444443222222222233333 233433 333354  69999999999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCc------------cccCCCCCCC---Ccc
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSA------------SSVDRGVQSP---ADI  289 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~------------~~~~~~~~~~---~~~  289 (320)
                      ++++++++.+.      .|.+++|++.|++|+++...+..|.+..+...-..            ..+.....++   .-.
T Consensus       235 mwlmLQq~~Pd------dyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~L  308 (345)
T COG1089         235 MWLMLQQEEPD------DYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLL  308 (345)
T ss_pred             HHHHHccCCCC------ceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhh
Confidence            99999986533      79999999999999999999999965432200000            0012222222   335


Q ss_pred             ccChHHHHhhcCCCc-cCHHHHHHHHHhh
Q 020880          290 SMDITKLVQTLNIDP-VTYKDGVKLTLAA  317 (320)
Q Consensus       290 ~~d~~k~~~~lg~~~-~~~~~~l~~~i~~  317 (320)
                      .-|.+|+++.|||+| ++++|.+++++++
T Consensus       309 lgdp~KA~~~LGW~~~~~~~elv~~Mv~~  337 (345)
T COG1089         309 LGDPTKAKEKLGWRPEVSLEELVREMVEA  337 (345)
T ss_pred             cCCHHHHHHHcCCccccCHHHHHHHHHHH
Confidence            679999999999999 9999999999976

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=4.5e-36  Score=260.35  Aligned_cols=273  Identities=15%  Similarity=0.159  Sum_probs=204.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|||||||||||++++++|+++|   ++|++++|+.++...+.   ..+++++.+|++|++++.++++   ++|+|||+
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g---~~V~~l~R~~~~~~~l~---~~~v~~v~~Dl~d~~~l~~al~---g~d~Vi~~   71 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEG---YQVRCLVRNLRKASFLK---EWGAELVYGDLSLPETLPPSFK---GVTAIIDA   71 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCC---CeEEEEEcChHHhhhHh---hcCCEEEECCCCCHHHHHHHHC---CCCEEEEC
Confidence            489999999999999999999999   89999999865433222   2368889999999999888887   89999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIY  163 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~  163 (320)
                      ++..     ..++....++|+.++. +++++|++.+++||||+||..++.            .+.++|..+|..+|++++
T Consensus        72 ~~~~-----~~~~~~~~~~~~~~~~-~l~~aa~~~gvkr~I~~Ss~~~~~------------~~~~~~~~~K~~~e~~l~  133 (317)
T CHL00194         72 STSR-----PSDLYNAKQIDWDGKL-ALIEAAKAAKIKRFIFFSILNAEQ------------YPYIPLMKLKSDIEQKLK  133 (317)
T ss_pred             CCCC-----CCCccchhhhhHHHHH-HHHHHHHHcCCCEEEEeccccccc------------cCCChHHHHHHHHHHHHH
Confidence            7632     1245567788999985 999999999999999999964321            123568999999999999


Q ss_pred             HHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec-CcccCceeHHHHHHHHHHHHhhhhccccccCce
Q 020880          164 EKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH-DECRCPVYVRDVVKIILALTNRWLSEDKQMQLL  242 (320)
Q Consensus       164 ~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  242 (320)
                      +.+.+++++||+.+|+.-..         .+....+ .+.++.+.+ +..++|||++|+|++++.+++++..    .+++
T Consensus       134 ~~~l~~tilRp~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~----~~~~  199 (317)
T CHL00194        134 KSGIPYTIFRLAGFFQGLIS---------QYAIPIL-EKQPIWITNESTPISYIDTQDAAKFCLKSLSLPET----KNKT  199 (317)
T ss_pred             HcCCCeEEEeecHHhhhhhh---------hhhhhhc-cCCceEecCCCCccCccCHHHHHHHHHHHhcCccc----cCcE
Confidence            99999999999998863210         1111112 234444433 4578999999999999999987432    3459


Q ss_pred             eEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccc-------cC---C------C------CCCCCccccChHHHHhhc
Q 020880          243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASS-------VD---R------G------VQSPADISMDITKLVQTL  300 (320)
Q Consensus       243 ~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~-------~~---~------~------~~~~~~~~~d~~k~~~~l  300 (320)
                      ||+++++.+|++|+++.+.+.+|.+..+. .+|...       ..   .      .      .....+...+.+++.+.|
T Consensus       200 ~ni~g~~~~s~~el~~~~~~~~g~~~~~~-~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  278 (317)
T CHL00194        200 FPLVGPKSWNSSEIISLCEQLSGQKAKIS-RVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIF  278 (317)
T ss_pred             EEecCCCccCHHHHHHHHHHHhCCCCeEE-eCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHh
Confidence            99999999999999999999999875432 222111       00   0      0      001234456788999999


Q ss_pred             CCCc---cCHHHHHHHHHhhh
Q 020880          301 NIDP---VTYKDGVKLTLAAE  318 (320)
Q Consensus       301 g~~~---~~~~~~l~~~i~~~  318 (320)
                      |+.|   .++++++++++..+
T Consensus       279 g~~p~~~~~~~~~~~~~~~~~  299 (317)
T CHL00194        279 KIDPNELISLEDYFQEYFERI  299 (317)
T ss_pred             CCChhhhhhHHHHHHHHHHHH
Confidence            9997   58999998877643

>PLN02778 3,5-epimerase/4-reductase

Probab=100.00  E-value=2e-35  Score=253.19  Aligned_cols=272  Identities=20%  Similarity=0.211  Sum_probs=197.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .|||||||||||||++|++.|+++|   ++|+...                     .|+.|.+.+...++.. ++|+|||
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g---~~V~~~~---------------------~~~~~~~~v~~~l~~~-~~D~ViH   63 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQG---IDFHYGS---------------------GRLENRASLEADIDAV-KPTHVFN   63 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCC---CEEEEec---------------------CccCCHHHHHHHHHhc-CCCEEEE
Confidence            4789999999999999999999999   6665321                     2344555555555543 7999999


Q ss_pred             CCCccCcc---ccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-------CCCcccCCCC-CcchH
Q 020880           83 CAALSVPR---VCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-------SFYKEEDEIA-PVNVY  151 (320)
Q Consensus        83 ~a~~~~~~---~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-------~~~~E~~~~~-p~~~Y  151 (320)
                      |||..+..   ++..+|...+++|+.++. +++++|++.++ +++++||.++|+...       .+++|++++. |.++|
T Consensus        64 ~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~-~ll~aa~~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Y  141 (298)
T PLN02778         64 AAGVTGRPNVDWCESHKVETIRANVVGTL-TLADVCRERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFY  141 (298)
T ss_pred             CCcccCCCCchhhhhCHHHHHHHHHHHHH-HHHHHHHHhCC-CEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCch
Confidence            99987532   355688999999999996 99999999998 467778888886422       1477777655 45899


Q ss_pred             HHHHHHHHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhh
Q 020880          152 GKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR  231 (320)
Q Consensus       152 ~~sK~~~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  231 (320)
                      +.+|.++|++++.+. +..++|++.++|++..      ....++..++ .+..+...+   .+|+|++|++++++.++.+
T Consensus       142 g~sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~------~~~~fi~~~~-~~~~~~~~~---~s~~yv~D~v~al~~~l~~  210 (298)
T PLN02778        142 SKTKAMVEELLKNYE-NVCTLRVRMPISSDLS------NPRNFITKIT-RYEKVVNIP---NSMTILDELLPISIEMAKR  210 (298)
T ss_pred             HHHHHHHHHHHHHhh-ccEEeeecccCCcccc------cHHHHHHHHH-cCCCeeEcC---CCCEEHHHHHHHHHHHHhC
Confidence            999999999999874 6778999888887531      1223454444 444443333   3799999999999999875


Q ss_pred             hhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCc-cccCCccccCCCCCCCCccccChHHHHhhcCCCccCHHHH
Q 020880          232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSL-IKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDG  310 (320)
Q Consensus       232 ~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~~~~~~~  310 (320)
                      ..      .++||+++++.+|++|+++.+++.++.+..+ ...++. ..........+..+|++|+++.++=.+...+++
T Consensus       211 ~~------~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~Ld~~k~~~~~~~~~~~~~~~  283 (298)
T PLN02778        211 NL------TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEE-QAKVIVAPRSNNELDTTKLKREFPELLPIKESL  283 (298)
T ss_pred             CC------CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHH-HHHHHhCCCccccccHHHHHHhcccccchHHHH
Confidence            21      2499999999999999999999999964221 111111 111011112233799999999887767788889


Q ss_pred             HHHHHhhhc
Q 020880          311 VKLTLAAEA  319 (320)
Q Consensus       311 l~~~i~~~~  319 (320)
                      ++..++-+|
T Consensus       284 ~~~~~~~~~  292 (298)
T PLN02778        284 IKYVFEPNK  292 (298)
T ss_pred             HHHHHHHHH
Confidence            888877664

>PRK05865 hypothetical protein; Provisional

Probab=100.00  E-value=6.7e-35  Score=274.27  Aligned_cols=253  Identities=17%  Similarity=0.227  Sum_probs=191.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|+|||||||||++++++|+++|   ++|++++|+....      ....+.++.+|++|.+++.++++   ++|+||||
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G---~~Vv~l~R~~~~~------~~~~v~~v~gDL~D~~~l~~al~---~vD~VVHl   68 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQG---HEVVGIARHRPDS------WPSSADFIAADIRDATAVESAMT---GADVVAHC   68 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCchhh------cccCceEEEeeCCCHHHHHHHHh---CCCEEEEC
Confidence            479999999999999999999999   8899999874321      12357789999999998888887   79999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIY  163 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~  163 (320)
                      |+...+         .+++|+.++. +++++|++.++++||++||..                        |.++|+++.
T Consensus        69 Aa~~~~---------~~~vNv~GT~-nLLeAa~~~gvkr~V~iSS~~------------------------K~aaE~ll~  114 (854)
T PRK05865         69 AWVRGR---------NDHINIDGTA-NVLKAMAETGTGRIVFTSSGH------------------------QPRVEQMLA  114 (854)
T ss_pred             CCcccc---------hHHHHHHHHH-HHHHHHHHcCCCeEEEECCcH------------------------HHHHHHHHH
Confidence            986421         4678999995 999999999999999999863                        889999998


Q ss_pred             HHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHhhhhccccccCc
Q 020880          164 EKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRWLSEDKQMQL  241 (320)
Q Consensus       164 ~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  241 (320)
                      +++.+++++||+++|||+..         .++....  ..++...|+  ..++|||++|+|++++.++++..    ..++
T Consensus       115 ~~gl~~vILRp~~VYGP~~~---------~~i~~ll--~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~----~~gg  179 (854)
T PRK05865        115 DCGLEWVAVRCALIFGRNVD---------NWVQRLF--ALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV----IDSG  179 (854)
T ss_pred             HcCCCEEEEEeceEeCCChH---------HHHHHHh--cCceeccCCCCceEeeeeHHHHHHHHHHHHhCCC----cCCC
Confidence            88999999999999999631         2333322  122223343  35699999999999999987532    1245


Q ss_pred             eeEecCCCCcCHHHHHHHHHHHhCC-CCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          242 LLNVGGPDRVSRVQMAEVVAEIRGY-STSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       242 ~~n~~~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      +||+++++.+|++|+++.+.+.... +.+......  .............+|++|++++|||+| ++++++|+++++|++
T Consensus       180 vyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r  257 (854)
T PRK05865        180 PVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVT--SFAELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVR  257 (854)
T ss_pred             eEEEECCCcccHHHHHHHHhhhhccCCchhhhhcc--chhhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence            8999999999999999998774321 000000000  000000112234689999999999999 899999999999986

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-34  Score=272.71  Aligned_cols=304  Identities=17%  Similarity=0.129  Sum_probs=214.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHh--hccCCCceEEEecCCCCCh--hhhhhhCC-CcceEEEeeCCCccc--HHHHHHHhCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLS--EIEGKPYDVAATHHSTPLP--QLLLDALP-HSFVFFDVDLKSGSG--FDAVALKFGQ   76 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~--~~g~~v~~v~~~~r~~~~~--~~~~~~~~-~~~~~~~~Dl~d~~~--~~~~~~~~~~   76 (320)
                      |+|||||||||||++|+++|+  ..|   ++|++++|+....  ..+..... ..++++.+|++|++.  ..+.++.+.+
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g---~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~   77 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRRE---ATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGD   77 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCC---CEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcC
Confidence            479999999999999999999  477   8999999964321  11111111 468889999999642  0111222248


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCC---CCCcchHHH
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDE---IAPVNVYGK  153 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~---~~p~~~Y~~  153 (320)
                      +|+||||||.....   .++....++|+.++. +++++|++.++++|||+||..+||....+++|++.   ..+.++|+.
T Consensus        78 ~D~Vih~Aa~~~~~---~~~~~~~~~nv~gt~-~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~  153 (657)
T PRK07201         78 IDHVVHLAAIYDLT---ADEEAQRAANVDGTR-NVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHR  153 (657)
T ss_pred             CCEEEECceeecCC---CCHHHHHHHHhHHHH-HHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHH
Confidence            99999999976432   245667889999995 99999999999999999999999976666666653   334578999


Q ss_pred             HHHHHHHHHHH-HcCCeeEEeecccccCCCCCCCCCC----ChHHHHHHHHhcCCceEee--cCcccCceeHHHHHHHHH
Q 020880          154 SKVAAEKFIYE-KCSNFAILRSSIIYGPQTISPVPKS----LPIQWIDSVLSKGEKVEFF--HDECRCPVYVRDVVKIIL  226 (320)
Q Consensus       154 sK~~~e~~~~~-~~~~~~ilR~~~v~G~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~  226 (320)
                      +|.++|+++++ .+.+++++||++|||+.........    +....+.........+...  +.+.++++|++|+++++.
T Consensus       154 sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~  233 (657)
T PRK07201        154 TKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALD  233 (657)
T ss_pred             HHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHH
Confidence            99999999985 4679999999999998753221110    1111222221111122222  335789999999999999


Q ss_pred             HHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCC---CccccCCccc----cC-------------CCC---
Q 020880          227 ALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYST---SLIKPVSASS----VD-------------RGV---  283 (320)
Q Consensus       227 ~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~---~~~~~~~~~~----~~-------------~~~---  283 (320)
                      .++..+..    .+++||+++++.+|+.|+++.+.+.+|.+.   +.. ..|...    ..             ...   
T Consensus       234 ~~~~~~~~----~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (657)
T PRK07201        234 HLMHKDGR----DGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFG-FLPGFVAAPLLAALGPVRRLRNAVATQLGIP  308 (657)
T ss_pred             HHhcCcCC----CCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccc-cCChHHHHHHhhhcchhhHHHHHHHHhcCCC
Confidence            99875322    345999999999999999999999999876   221 222110    00             000   


Q ss_pred             -----CCCCccccChHHHHhhc---CCCccCHHHHHHHHHhhhc
Q 020880          284 -----QSPADISMDITKLVQTL---NIDPVTYKDGVKLTLAAEA  319 (320)
Q Consensus       284 -----~~~~~~~~d~~k~~~~l---g~~~~~~~~~l~~~i~~~~  319 (320)
                           .......+|++++++.|   |+.+..+++.+...+++|.
T Consensus       309 ~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p~~~~~~~~~~~~~~  352 (657)
T PRK07201        309 PEVLDFVNYPTTFDSRETRAALKGSGIEVPRLASYAPRLWDYWE  352 (657)
T ss_pred             HHHHHhccCCCeeccHHHHHHhccCCcCCCChHHHHHHHHHHHH
Confidence                 01234678999999998   6666888899998888763

>PLN02583 cinnamoyl-CoA reductase

Probab=100.00  E-value=8.6e-34  Score=243.73  Aligned_cols=269  Identities=15%  Similarity=0.098  Sum_probs=191.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh--hhhhhhC---CCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP--QLLLDAL---PHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~--~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      +++|||||||||||++++++|+++|   ++|+++.|+.+..  ......+   ..++.++.+|++|.+++.+++.   ++
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G---~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~---~~   79 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRG---YTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK---GC   79 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc---CC
Confidence            5789999999999999999999999   8999999864321  1122221   2457889999999998888776   89


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeechhhhc--cc----CCCCcccCCCCCc--
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTDQVYE--GV----KSFYKEEDEIAPV--  148 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~~vy~--~~----~~~~~E~~~~~p~--  148 (320)
                      |.|+|+++.....  ..+++..+++|+.++. +++++|.+. +++++|++||..+++  +.    ..+++|+++..+.  
T Consensus        80 d~v~~~~~~~~~~--~~~~~~~~~~nv~gt~-~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~  156 (297)
T PLN02583         80 SGLFCCFDPPSDY--PSYDEKMVDVEVRAAH-NVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFC  156 (297)
T ss_pred             CEEEEeCccCCcc--cccHHHHHHHHHHHHH-HHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHH
Confidence            9999987654221  1235678999999996 999999886 578999999987753  11    1257887654332  


Q ss_pred             ----chHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          149 ----NVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       149 ----~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                          ..|+.||..+|++++.+    +.+++++||++||||......      ..    + .+. ....+++.++||||+|
T Consensus       157 ~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~------~~----~-~~~-~~~~~~~~~~~v~V~D  224 (297)
T PLN02583        157 RKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN------PY----L-KGA-AQMYENGVLVTVDVNF  224 (297)
T ss_pred             hhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch------hh----h-cCC-cccCcccCcceEEHHH
Confidence                27999999999988654    578999999999999763211      11    1 111 1223345668999999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhc
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL  300 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  300 (320)
                      +|++++++++.+...+     .|+++++......++++.+.+.++.-+ +....     ...........++++|+++ |
T Consensus       225 va~a~~~al~~~~~~~-----r~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~-----~~~~~~~~~~~~~~~k~~~-l  292 (297)
T PLN02583        225 LVDAHIRAFEDVSSYG-----RYLCFNHIVNTEEDAVKLAQMLSPLIP-SPPPY-----EMQGSEVYQQRIRNKKLNK-L  292 (297)
T ss_pred             HHHHHHHHhcCcccCC-----cEEEecCCCccHHHHHHHHHHhCCCCC-CCCcc-----cccCCCccccccChHHHHH-h
Confidence            9999999999754332     588887665567889999998876421 11100     0011122446789999955 8


Q ss_pred             CCCc
Q 020880          301 NIDP  304 (320)
Q Consensus       301 g~~~  304 (320)
                      |+++
T Consensus       293 ~~~~  296 (297)
T PLN02583        293 MEDF  296 (297)
T ss_pred             Cccc
Confidence            9874

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=100.00  E-value=4.8e-34  Score=245.45  Aligned_cols=275  Identities=16%  Similarity=0.151  Sum_probs=191.9

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEECCC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAA   85 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a~   85 (320)
                      |||||||||||++++++|+++|   ++|+++.|+..+......     .  ...|+.. ..+.+.+   .++|+|||||+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~-----~--~~~~~~~-~~~~~~~---~~~D~Vvh~a~   66 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDG---HEVTILTRSPPAGANTKW-----E--GYKPWAP-LAESEAL---EGADAVINLAG   66 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcC---CEEEEEeCCCCCCCcccc-----e--eeecccc-cchhhhc---CCCCEEEECCC
Confidence            6999999999999999999999   899999998765432111     0  1112222 2233333   48999999999


Q ss_pred             ccCcc--ccccCchhhhhccccccHHHHHhhhhhccCc--eEEEeechhhhcccC-CCCcccCCCCCcchHHHHHHHHHH
Q 020880           86 LSVPR--VCENDPDSAMSINVPSSLVNWLSSFTENKEN--LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEK  160 (320)
Q Consensus        86 ~~~~~--~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~--~~v~~Ss~~vy~~~~-~~~~E~~~~~p~~~Y~~sK~~~e~  160 (320)
                      .....  ....++...++.|+.++. +++++|++.+++  .+|+.||..+||... .+++|+++..+.+.|+..+...|+
T Consensus        67 ~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~  145 (292)
T TIGR01777        67 EPIADKRWTEERKQEIRDSRIDTTR-ALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEE  145 (292)
T ss_pred             CCcccccCCHHHHHHHHhcccHHHH-HHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHH
Confidence            75432  222345677889999985 999999999863  577777778898654 478898866666677777777777


Q ss_pred             HHHH---HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHh--cCCceEeecCcccCceeHHHHHHHHHHHHhhhhcc
Q 020880          161 FIYE---KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLS--KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE  235 (320)
Q Consensus       161 ~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  235 (320)
                      .+..   .+.+++++||+.+|||++.      ....++ ....  .+..+ -.++..++|||++|+|+++..+++++.. 
T Consensus       146 ~~~~~~~~~~~~~ilR~~~v~G~~~~------~~~~~~-~~~~~~~~~~~-g~~~~~~~~i~v~Dva~~i~~~l~~~~~-  216 (292)
T TIGR01777       146 AAQAAEDLGTRVVLLRTGIVLGPKGG------ALAKML-PPFRLGLGGPL-GSGRQWFSWIHIEDLVQLILFALENASI-  216 (292)
T ss_pred             HhhhchhcCCceEEEeeeeEECCCcc------hhHHHH-HHHhcCccccc-CCCCcccccEeHHHHHHHHHHHhcCccc-
Confidence            6543   3578999999999999742      111111 1111  11221 1235689999999999999999986422 


Q ss_pred             ccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCC----C-CCCCccccChHHHHhhcCCCc-c-CHH
Q 020880          236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRG----V-QSPADISMDITKLVQTLNIDP-V-TYK  308 (320)
Q Consensus       236 ~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~d~~k~~~~lg~~~-~-~~~  308 (320)
                          .++||+++++.+|+.|+++.+.+.+|.+...  ..|.......    + .....+.++++|+++ +||+| + +++
T Consensus       217 ----~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~  289 (292)
T TIGR01777       217 ----SGPVNATAPEPVRNKEFAKALARALHRPAFF--PVPAFVLRALLGEMADLLLKGQRVLPEKLLE-AGFQFQYPDLD  289 (292)
T ss_pred             ----CCceEecCCCccCHHHHHHHHHHHhCCCCcC--cCCHHHHHHHhchhhHHHhCCcccccHHHHh-cCCeeeCcChh
Confidence                3489999999999999999999999976432  2333221111    0 112456788999975 99999 6 688


Q ss_pred             HHH
Q 020880          309 DGV  311 (320)
Q Consensus       309 ~~l  311 (320)
                      |++
T Consensus       290 ~~~  292 (292)
T TIGR01777       290 EAL  292 (292)
T ss_pred             hcC
Confidence            864

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02996 fatty acyl-CoA reductase

Probab=100.00  E-value=1.3e-33  Score=256.29  Aligned_cols=258  Identities=18%  Similarity=0.167  Sum_probs=188.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh---hhh-------------hhC--------CCcceEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ---LLL-------------DAL--------PHSFVFF   57 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~---~~~-------------~~~--------~~~~~~~   57 (320)
                      .+|+|||||||||||++|++.|+..+.++.+|+++.|......   ++.             +..        ..+++++
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i   89 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV   89 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence            3689999999999999999999987765567899999764321   111             001        1468899


Q ss_pred             EeeCCCc-------ccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeech
Q 020880           58 DVDLKSG-------SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTD  129 (320)
Q Consensus        58 ~~Dl~d~-------~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~  129 (320)
                      .+|++++       +.+.++++   ++|+|||+|+.....   .+++..+++|+.++. +++++|++. +++++||+||+
T Consensus        90 ~GDl~~~~LGLs~~~~~~~l~~---~vD~ViH~AA~v~~~---~~~~~~~~~Nv~gt~-~ll~~a~~~~~~k~~V~vST~  162 (491)
T PLN02996         90 PGDISYDDLGVKDSNLREEMWK---EIDIVVNLAATTNFD---ERYDVALGINTLGAL-NVLNFAKKCVKVKMLLHVSTA  162 (491)
T ss_pred             ecccCCcCCCCChHHHHHHHHh---CCCEEEECccccCCc---CCHHHHHHHHHHHHH-HHHHHHHhcCCCCeEEEEeee
Confidence            9999854       33455555   899999999987542   367888999999995 999999885 68899999999


Q ss_pred             hhhcccCCCCcccC----------------------------------------------------CCCCcchHHHHHHH
Q 020880          130 QVYEGVKSFYKEED----------------------------------------------------EIAPVNVYGKSKVA  157 (320)
Q Consensus       130 ~vy~~~~~~~~E~~----------------------------------------------------~~~p~~~Y~~sK~~  157 (320)
                      ++||.....+.|..                                                    ...+.+.|+.||.+
T Consensus       163 ~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~  242 (491)
T PLN02996        163 YVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAM  242 (491)
T ss_pred             EEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHH
Confidence            99986432221110                                                    01234579999999


Q ss_pred             HHHHHHHH--cCCeeEEeecccccCCCCCCCC--CC--ChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHH
Q 020880          158 AEKFIYEK--CSNFAILRSSIIYGPQTISPVP--KS--LPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALT  229 (320)
Q Consensus       158 ~e~~~~~~--~~~~~ilR~~~v~G~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~  229 (320)
                      +|++++++  +.+++++||++|||+...+...  ..  .+..++ .....|....+.|+  ..+|+|||+|++++++.++
T Consensus       243 aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~-~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~  321 (491)
T PLN02996        243 GEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVI-VGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAM  321 (491)
T ss_pred             HHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHH-HHhccceEeEEecCCCeecceecccHHHHHHHHHH
Confidence            99999886  4689999999999998643211  00  111222 22335655556554  5899999999999999998


Q ss_pred             hhhhccccccCceeEecCC--CCcCHHHHHHHHHHHhCCCC
Q 020880          230 NRWLSEDKQMQLLLNVGGP--DRVSRVQMAEVVAEIRGYST  268 (320)
Q Consensus       230 ~~~~~~~~~~~~~~n~~~~--~~~s~~e~~~~i~~~~~~~~  268 (320)
                      .+... ....+.+||++++  .++|+.|+++.+.+.++..+
T Consensus       322 ~~~~~-~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p  361 (491)
T PLN02996        322 AAHAG-GQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP  361 (491)
T ss_pred             HHhhc-cCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence            76321 1112459999998  88999999999999887554

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=1e-32  Score=261.69  Aligned_cols=269  Identities=19%  Similarity=0.220  Sum_probs=202.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ++||||||||+||||++|++.|.++|   ++|..                     ..+|++|.+.+...+... ++|+||
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g---~~v~~---------------------~~~~l~d~~~v~~~i~~~-~pd~Vi  433 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQG---IAYEY---------------------GKGRLEDRSSLLADIRNV-KPTHVF  433 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCC---CeEEe---------------------eccccccHHHHHHHHHhh-CCCEEE
Confidence            35799999999999999999999999   66621                     124577888887777765 899999


Q ss_pred             ECCCccC---ccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhccc-------CCCCcccCCCCC-cch
Q 020880           82 NCAALSV---PRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV-------KSFYKEEDEIAP-VNV  150 (320)
Q Consensus        82 h~a~~~~---~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~-------~~~~~E~~~~~p-~~~  150 (320)
                      |||+..+   .+.++.+++..+++|+.++. +++++|++.++ ++|++||.++|+..       ..+++|++++.| .++
T Consensus       434 h~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~-~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~  511 (668)
T PLN02260        434 NAAGVTGRPNVDWCESHKVETIRANVVGTL-TLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSF  511 (668)
T ss_pred             ECCcccCCCCCChHHhCHHHHHHHHhHHHH-HHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCCh
Confidence            9999874   33556788999999999996 99999999999 57888998998631       237888877665 489


Q ss_pred             HHHHHHHHHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHh
Q 020880          151 YGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN  230 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  230 (320)
                      |+.+|.++|++++.+ .+..++|+.++||.+...  ..    .++..++.....+.++    .+..+++|++.+++.+++
T Consensus       512 Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~--~~----nfv~~~~~~~~~~~vp----~~~~~~~~~~~~~~~l~~  580 (668)
T PLN02260        512 YSKTKAMVEELLREY-DNVCTLRVRMPISSDLSN--PR----NFITKISRYNKVVNIP----NSMTVLDELLPISIEMAK  580 (668)
T ss_pred             hhHHHHHHHHHHHhh-hhheEEEEEEecccCCCC--cc----HHHHHHhccceeeccC----CCceehhhHHHHHHHHHH
Confidence            999999999999887 578899999999754321  11    3444444334434332    356788899999888876


Q ss_pred             hhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccC--CCCCCCCccccChHHHHhhcCCCccCHH
Q 020880          231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD--RGVQSPADISMDITKLVQTLNIDPVTYK  308 (320)
Q Consensus       231 ~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~k~~~~lg~~~~~~~  308 (320)
                      ...      +++||+++++.+|++|+++.|.+.++.... +.++......  ....++.+ .+|++|+++.+|+ +.+++
T Consensus       581 ~~~------~giyni~~~~~~s~~e~a~~i~~~~~~~~~-~~~~~~~~~~~~~~a~rp~~-~l~~~k~~~~~~~-~~~~~  651 (668)
T PLN02260        581 RNL------RGIWNFTNPGVVSHNEILEMYKDYIDPGFK-WSNFTLEEQAKVIVAPRSNN-EMDASKLKKEFPE-LLSIK  651 (668)
T ss_pred             hCC------CceEEecCCCcCcHHHHHHHHHHhcCCccc-ccccCHHHhhhHhhCCCccc-cccHHHHHHhCcc-ccchH
Confidence            421      359999999999999999999998742211 1122222222  33445666 8999999998999 89999


Q ss_pred             HHHHHHHhh
Q 020880          309 DGVKLTLAA  317 (320)
Q Consensus       309 ~~l~~~i~~  317 (320)
                      |+|++++..
T Consensus       652 ~~l~~~~~~  660 (668)
T PLN02260        652 ESLIKYVFE  660 (668)
T ss_pred             HHHHHHHhh
Confidence            999998854

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=100.00  E-value=2.2e-31  Score=236.03  Aligned_cols=231  Identities=20%  Similarity=0.270  Sum_probs=181.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh------hhhhhCCCcceEEEeeCCCcccHHHHHHHhC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ------LLLDALPHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~------~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      .+|+|||||||||||++++++|+++|   ++|+++.|+.++..      .... ...+++++.+|++|++++.++++..+
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G---~~V~~l~R~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl~d~~~l~~~~~~~~  134 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRG---YNVVAVAREKSGIRGKNGKEDTKK-ELPGAEVVFGDVTDADSLRKVLFSEG  134 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEEechhhccccchhhHHhh-hcCCceEEEeeCCCHHHHHHHHHHhC
Confidence            36799999999999999999999999   89999999865432      1111 12468889999999999999887432


Q ss_pred             -CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHH
Q 020880           76 -QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKS  154 (320)
Q Consensus        76 -~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~s  154 (320)
                       ++|+||||++....     .....+++|+.++. +++++|++.++++||++||.++++             |...|..+
T Consensus       135 ~~~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~-~ll~aa~~~gv~r~V~iSS~~v~~-------------p~~~~~~s  195 (390)
T PLN02657        135 DPVDVVVSCLASRTG-----GVKDSWKIDYQATK-NSLDAGREVGAKHFVLLSAICVQK-------------PLLEFQRA  195 (390)
T ss_pred             CCCcEEEECCccCCC-----CCccchhhHHHHHH-HHHHHHHHcCCCEEEEEeeccccC-------------cchHHHHH
Confidence             59999999875321     12345677888885 999999999999999999998764             35578999


Q ss_pred             HHHHHHHHHH--HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcc--c-CceeHHHHHHHHHHHH
Q 020880          155 KVAAEKFIYE--KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC--R-CPVYVRDVVKIILALT  229 (320)
Q Consensus       155 K~~~e~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~i~v~D~a~~~~~~~  229 (320)
                      |..+|+.++.  .+.+++++||+.+||+-.          ..+ ..+..+.++.++|++.  + ++||++|+|+++..++
T Consensus       196 K~~~E~~l~~~~~gl~~tIlRp~~~~~~~~----------~~~-~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~  264 (390)
T PLN02657        196 KLKFEAELQALDSDFTYSIVRPTAFFKSLG----------GQV-EIVKDGGPYVMFGDGKLCACKPISEADLASFIADCV  264 (390)
T ss_pred             HHHHHHHHHhccCCCCEEEEccHHHhcccH----------HHH-HhhccCCceEEecCCcccccCceeHHHHHHHHHHHH
Confidence            9999998876  678999999999997421          122 3344677887777642  3 5799999999999998


Q ss_pred             hhhhccccccCceeEecCC-CCcCHHHHHHHHHHHhCCCCCc
Q 020880          230 NRWLSEDKQMQLLLNVGGP-DRVSRVQMAEVVAEIRGYSTSL  270 (320)
Q Consensus       230 ~~~~~~~~~~~~~~n~~~~-~~~s~~e~~~~i~~~~~~~~~~  270 (320)
                      .++..    .+++||++++ +.+|++|+++.+.+.+|.+..+
T Consensus       265 ~~~~~----~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~  302 (390)
T PLN02657        265 LDESK----INKVLPIGGPGKALTPLEQGEMLFRILGKEPKF  302 (390)
T ss_pred             hCccc----cCCEEEcCCCCcccCHHHHHHHHHHHhCCCCce
Confidence            76422    3459999986 5899999999999999987554

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=100.00  E-value=2.2e-32  Score=226.01  Aligned_cols=233  Identities=21%  Similarity=0.280  Sum_probs=179.3

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----C-Ccce----EEEeeCCCcccHHHHHHHhCC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----P-HSFV----FFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~-~~~~----~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      ||||||+|.||+.|+++|++.+.  ..++.++|++.+...+...+    + .++.    .+.+|++|.+.+..+++.+ +
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p--~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~-~   77 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGP--KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY-K   77 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT---T
T ss_pred             CEEEccccHHHHHHHHHHHhcCC--CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc-C
Confidence            79999999999999999999885  68999999988776666655    2 2343    3588999999999988876 9


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHH
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKV  156 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~  156 (320)
                      +|+|||.|+..+.+.++.+|.+.+++|+.|+. |++++|.+.+++++|++||-.+.             +|.+.||.||.
T Consensus        78 pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~-nv~~aa~~~~v~~~v~ISTDKAv-------------~PtnvmGatKr  143 (293)
T PF02719_consen   78 PDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQ-NVAEAAIEHGVERFVFISTDKAV-------------NPTNVMGATKR  143 (293)
T ss_dssp             -SEEEE------HHHHCCCHHHHHHHHCHHHH-HHHHHHHHTT-SEEEEEEECGCS-------------S--SHHHHHHH
T ss_pred             CCEEEEChhcCCCChHHhCHHHHHHHHHHHHH-HHHHHHHHcCCCEEEEccccccC-------------CCCcHHHHHHH
Confidence            99999999999999999999999999999995 99999999999999999998753             57899999999


Q ss_pred             HHHHHHHHHcC-------CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC-cccCceeHHHHHHHHHHH
Q 020880          157 AAEKFIYEKCS-------NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       157 ~~e~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~  228 (320)
                      .+|+++...+.       .++++|+|+|+|...      +.++ .+.+.+++|.++.+... -.|=|+.++++++.++.+
T Consensus       144 laE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G------SVip-~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a  216 (293)
T PF02719_consen  144 LAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG------SVIP-LFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQA  216 (293)
T ss_dssp             HHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT------SCHH-HHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhCCCCCcEEEEEEecceecCCC------cHHH-HHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHH
Confidence            99999998753       468999999999754      3443 45556778999999765 578889999999999999


Q ss_pred             HhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCC
Q 020880          229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYS  267 (320)
Q Consensus       229 ~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~  267 (320)
                      +.....     +++|.+.-|+++++.|+++.+.+..|..
T Consensus       217 ~~~~~~-----geifvl~mg~~v~I~dlA~~~i~~~g~~  250 (293)
T PF02719_consen  217 AALAKG-----GEIFVLDMGEPVKILDLAEAMIELSGLE  250 (293)
T ss_dssp             HHH--T-----TEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred             HhhCCC-----CcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence            887433     4499999889999999999999999864

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.98  E-value=1.1e-30  Score=228.96  Aligned_cols=237  Identities=21%  Similarity=0.305  Sum_probs=203.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----C-CcceEEEeeCCCcccHHHHHHHhCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----P-HSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      .+|+||||||+|-||+.+|+++++.+.  -+++..+|++.+.......+    + ..+.++.+|+.|.+.+..+++.+ +
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-k  325 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-K  325 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCC--CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-C
Confidence            378999999999999999999999875  68999999987765544433    2 46778999999999999999965 6


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHH
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKV  156 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~  156 (320)
                      +|+|||+|++.+.+.++.+|.+.+++|+.||. |++++|.+.+++++|.+||-.+             .+|.+.||.+|.
T Consensus       326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~-nv~~aa~~~~V~~~V~iSTDKA-------------V~PtNvmGaTKr  391 (588)
T COG1086         326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTE-NVAEAAIKNGVKKFVLISTDKA-------------VNPTNVMGATKR  391 (588)
T ss_pred             CceEEEhhhhccCcchhcCHHHHHHHhhHhHH-HHHHHHHHhCCCEEEEEecCcc-------------cCCchHhhHHHH
Confidence            99999999999999999999999999999996 9999999999999999999764             468899999999


Q ss_pred             HHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCc-ccCceeHHHHHHHHHHH
Q 020880          157 AAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDE-CRCPVYVRDVVKIILAL  228 (320)
Q Consensus       157 ~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~~~~~~  228 (320)
                      .+|..++.++       .+++++|+|+|.|...      + +..++.+.+++|.++++.... .|=|..+.|+++.++.+
T Consensus       392 ~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG------S-ViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA  464 (588)
T COG1086         392 LAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG------S-VIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQA  464 (588)
T ss_pred             HHHHHHHHHhhccCCCCcEEEEEEecceecCCC------C-CHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHH
Confidence            9999988763       3578999999999764      2 234666778899999998654 67789999999999999


Q ss_pred             HhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCC
Q 020880          229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYS  267 (320)
Q Consensus       229 ~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~  267 (320)
                      .....     .+++|-+.-|+++++.|+++.+.+..|..
T Consensus       465 ~a~~~-----gGeifvldMGepvkI~dLAk~mi~l~g~~  498 (588)
T COG1086         465 GAIAK-----GGEIFVLDMGEPVKIIDLAKAMIELAGQT  498 (588)
T ss_pred             HhhcC-----CCcEEEEcCCCCeEHHHHHHHHHHHhCCC
Confidence            88733     24499999999999999999999999843

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.97  E-value=6.2e-31  Score=210.87  Aligned_cols=281  Identities=18%  Similarity=0.188  Sum_probs=196.4

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEECCC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAA   85 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a~   85 (320)
                      |+|||||||||++|+.+|.+.|   ++|+.++|++.+.......          .+...+.+.+..+  .++|+|||+||
T Consensus         1 IliTGgTGlIG~~L~~~L~~~g---h~v~iltR~~~~~~~~~~~----------~v~~~~~~~~~~~--~~~DavINLAG   65 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGG---HQVTILTRRPPKASQNLHP----------NVTLWEGLADALT--LGIDAVINLAG   65 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCC---CeEEEEEcCCcchhhhcCc----------cccccchhhhccc--CCCCEEEECCC
Confidence            6899999999999999999999   7899999998776543221          1112223333333  16999999999


Q ss_pred             ccCc--cccccCchhhhhccccccHHHHHhhhhh--ccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHHHH
Q 020880           86 LSVP--RVCENDPDSAMSINVPSSLVNWLSSFTE--NKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEK  160 (320)
Q Consensus        86 ~~~~--~~~~~~~~~~~~~n~~~~~~~~l~~~~~--~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~e~  160 (320)
                      ..-.  .++....+.+.+..+..| ..+.++..+  .+.+.+|..|.+..||.... .++|+++. +...-+......|+
T Consensus        66 ~~I~~rrWt~~~K~~i~~SRi~~T-~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~-g~~Fla~lc~~WE~  143 (297)
T COG1090          66 EPIAERRWTEKQKEEIRQSRINTT-EKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPP-GDDFLAQLCQDWEE  143 (297)
T ss_pred             CccccccCCHHHHHHHHHHHhHHH-HHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCC-CCChHHHHHHHHHH
Confidence            8644  255566778888888888 477777764  44556777777788997765 78998554 45677888889998


Q ss_pred             HHHHH---cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhcccc
Q 020880          161 FIYEK---CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK  237 (320)
Q Consensus       161 ~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~  237 (320)
                      .....   +.+++++|.|+|.|+... ......+  .+.  ..-|.++. .|.++.+|||++|+++++.+++++...   
T Consensus       144 ~a~~a~~~gtRvvllRtGvVLs~~GG-aL~~m~~--~fk--~glGG~~G-sGrQ~~SWIhieD~v~~I~fll~~~~l---  214 (297)
T COG1090         144 EALQAQQLGTRVVLLRTGVVLSPDGG-ALGKMLP--LFK--LGLGGKLG-SGRQWFSWIHIEDLVNAILFLLENEQL---  214 (297)
T ss_pred             HHhhhhhcCceEEEEEEEEEecCCCc-chhhhcc--hhh--hccCCccC-CCCceeeeeeHHHHHHHHHHHHhCcCC---
Confidence            77664   558999999999998752 1111111  010  11133331 245789999999999999999998433   


Q ss_pred             ccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCC-----CccccChHHHHhhcCCCc--cCHHHH
Q 020880          238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP-----ADISMDITKLVQTLNIDP--VTYKDG  310 (320)
Q Consensus       238 ~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~d~~k~~~~lg~~~--~~~~~~  310 (320)
                        .+.||+++|.+++..++.+.+.+.++++..+  ++|...........     ..+..-..|+.+ .||++  ++++++
T Consensus       215 --sGp~N~taP~PV~~~~F~~al~r~l~RP~~~--~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~-aGF~F~y~dl~~A  289 (297)
T COG1090         215 --SGPFNLTAPNPVRNKEFAHALGRALHRPAIL--PVPSFALRLLLGEMADLLLGGQRVLPKKLEA-AGFQFQYPDLEEA  289 (297)
T ss_pred             --CCcccccCCCcCcHHHHHHHHHHHhCCCccc--cCcHHHHHHHhhhhHHHHhccchhhHHHHHH-CCCeeecCCHHHH
Confidence              3489999999999999999999999988654  33332221111111     223344455644 69988  699999


Q ss_pred             HHHHHhh
Q 020880          311 VKLTLAA  317 (320)
Q Consensus       311 l~~~i~~  317 (320)
                      |.+.+..
T Consensus       290 L~~il~~  296 (297)
T COG1090         290 LADILKR  296 (297)
T ss_pred             HHHHHhc
Confidence            9998753

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.97  E-value=1.7e-29  Score=224.05  Aligned_cols=253  Identities=21%  Similarity=0.206  Sum_probs=180.5

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh---hhhh---hC-------C-CcceEEEeeCCCcc-----
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ---LLLD---AL-------P-HSFVFFDVDLKSGS-----   65 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~---~~~~---~~-------~-~~~~~~~~Dl~d~~-----   65 (320)
                      +|||||||||||++|+++|+++|+. ++|++++|+.+...   ++.+   ..       . .++.++.+|++++.     
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~-~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~   79 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQ-AKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSD   79 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCC-CEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCH
Confidence            5899999999999999999999854 57999999866321   1111   10       0 46888999998753     


Q ss_pred             -cHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccC
Q 020880           66 -GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEED  143 (320)
Q Consensus        66 -~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~  143 (320)
                       .+..+.+   ++|+|||+|+.....   ...+...+.|+.++. +++++|.+.+.++|||+||.++|+.... +..|++
T Consensus        80 ~~~~~~~~---~~d~vih~a~~~~~~---~~~~~~~~~nv~g~~-~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~  152 (367)
T TIGR01746        80 AEWERLAE---NVDTIVHNGALVNWV---YPYSELRAANVLGTR-EVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDD  152 (367)
T ss_pred             HHHHHHHh---hCCEEEeCCcEeccC---CcHHHHhhhhhHHHH-HHHHHHhhCCCceEEEEccccccCCcCCCCccccc
Confidence             3444443   899999999976432   234566789999995 9999999999888999999999986432 234443


Q ss_pred             CC-----CCcchHHHHHHHHHHHHHHH---cCCeeEEeecccccCCCCCCCC-CCChHHHHHHHHhcCCceEeecCcccC
Q 020880          144 EI-----APVNVYGKSKVAAEKFIYEK---CSNFAILRSSIIYGPQTISPVP-KSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       144 ~~-----~p~~~Y~~sK~~~e~~~~~~---~~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                      +.     .+.+.|+.+|..+|.++++.   +.+++++||+.++|+....... ...+..++......+ .++.......+
T Consensus       153 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~  231 (367)
T TIGR01746       153 AIVTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALG-AYPDSPELTED  231 (367)
T ss_pred             cccccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhC-CCCCCCccccC
Confidence            32     23568999999999988875   6789999999999984432211 122223333333222 11111123578


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTS  269 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~  269 (320)
                      |+|++|++++++.++..+...  ..+++||+++++.+++.|+++.+.+ +|.+..
T Consensus       232 ~~~vddva~ai~~~~~~~~~~--~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~  283 (367)
T TIGR01746       232 LTPVDYVARAIVALSSQPAAS--AGGPVFHVVNPEPVSLDEFLEWLER-AGYNLK  283 (367)
T ss_pred             cccHHHHHHHHHHHHhCCCcc--cCCceEEecCCCCCCHHHHHHHHHH-cCCCCC
Confidence            999999999999998764321  1145999999999999999999998 777654

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.96  E-value=1.6e-28  Score=224.59  Aligned_cols=258  Identities=18%  Similarity=0.119  Sum_probs=180.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh---hhhhhh-------------C--------CCcceEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP---QLLLDA-------------L--------PHSFVFF   57 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~---~~~~~~-------------~--------~~~~~~~   57 (320)
                      ..|+|||||||||||++|++.|++.+.+|-+|+++.|..+..   +++...             .        ..++.++
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            368999999999999999999998876656899999975432   122111             0        2457889


Q ss_pred             EeeCCCcc------cHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeechh
Q 020880           58 DVDLKSGS------GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTDQ  130 (320)
Q Consensus        58 ~~Dl~d~~------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~~  130 (320)
                      .+|++++.      ..+.+.+   ++|+|||+|+.....   .+++..+++|+.++. ++++.|++. +.++|||+||++
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~---~vDiVIH~AA~v~f~---~~~~~a~~vNV~GT~-nLLelA~~~~~lk~fV~vSTay  270 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAK---EVDVIINSAANTTFD---ERYDVAIDINTRGPC-HLMSFAKKCKKLKLFLQVSTAY  270 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHh---cCCEEEECccccccc---cCHHHHHHHHHHHHH-HHHHHHHHcCCCCeEEEccCce
Confidence            99999973      3444444   799999999987543   467888999999995 999999886 467999999999


Q ss_pred             hhcccCCCCcccCCC-----------------------------------------------------------CCcchH
Q 020880          131 VYEGVKSFYKEEDEI-----------------------------------------------------------APVNVY  151 (320)
Q Consensus       131 vy~~~~~~~~E~~~~-----------------------------------------------------------~p~~~Y  151 (320)
                      |||...+.+.|..-+                                                           .-.+.|
T Consensus       271 VyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtY  350 (605)
T PLN02503        271 VNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTY  350 (605)
T ss_pred             eecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChH
Confidence            999765433332110                                                           012689


Q ss_pred             HHHHHHHHHHHHHH--cCCeeEEeecccccCCCCCC--C-CC-CChHHHHHHHHhcCCceEeec--CcccCceeHHHHHH
Q 020880          152 GKSKVAAEKFIYEK--CSNFAILRSSIIYGPQTISP--V-PK-SLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRDVVK  223 (320)
Q Consensus       152 ~~sK~~~e~~~~~~--~~~~~ilR~~~v~G~~~~~~--~-~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~a~  223 (320)
                      ..+|.++|.++++.  ..+++|+||++|.+....+.  . .. ......+. ....|..-.+.+  +...|+|+|+.+++
T Consensus       351 t~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~-~~g~G~lr~~~~~~~~~~DiVPVD~vvn  429 (605)
T PLN02503        351 VFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVL-YYGKGQLTGFLADPNGVLDVVPADMVVN  429 (605)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhh-heeccceeEEEeCCCeeEeEEeecHHHH
Confidence            99999999999987  45799999999944221110  0 00 00001111 112343322344  35889999999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCC--CCcCHHHHHHHHHHHhCCC
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGP--DRVSRVQMAEVVAEIRGYS  267 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~--~~~s~~e~~~~i~~~~~~~  267 (320)
                      +++.++.......+....+||++++  .++++.++.+.+.+.+...
T Consensus       430 a~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~  475 (605)
T PLN02503        430 ATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSS  475 (605)
T ss_pred             HHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhC
Confidence            9998854322211223579999988  8899999999999876543

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.96  E-value=6.3e-28  Score=189.46  Aligned_cols=304  Identities=16%  Similarity=0.136  Sum_probs=220.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh-hhhh-hC-------CCcceEEEeeCCCcccHHHHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-LLLD-AL-------PHSFVFFDVDLKSGSGFDAVALK   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~-~~~~-~~-------~~~~~~~~~Dl~d~~~~~~~~~~   73 (320)
                      +|..||||-||.=|++|++.|+.+|   |+|.++.|+.+.-. ...+ .+       +.......+|++|...+..+++.
T Consensus        28 rkvALITGItGQDGSYLaEfLL~Kg---YeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~  104 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKG---YEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIST  104 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCC---ceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhc
Confidence            4678999999999999999999999   89999998765421 1111 11       24567788999999999999988


Q ss_pred             hCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc---eEEEeechhhhccc-CCCCcccCCCCCcc
Q 020880           74 FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN---LLIHLSTDQVYEGV-KSFYKEEDEIAPVN  149 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~---~~v~~Ss~~vy~~~-~~~~~E~~~~~p~~  149 (320)
                      + .++-|+|+|+.++...+..-|+-..++...|++ +++++.+.++..   ||-..||+..||.. +.|..|.+|..|.+
T Consensus       105 i-kPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtL-RlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRS  182 (376)
T KOG1372|consen  105 I-KPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTL-RLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRS  182 (376)
T ss_pred             c-CchhhhhhhhhcceEEEeecccceeeccchhhh-hHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCC
Confidence            7 999999999999887777778888888999997 999998876642   89999999999955 44899999999999


Q ss_pred             hHHHHHHHHHHHHHHHcCCee-EEeeccccc---CCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHH
Q 020880          150 VYGKSKVAAEKFIYEKCSNFA-ILRSSIIYG---PQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVK  223 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~~~~~-ilR~~~v~G---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~  223 (320)
                      ||+.+|...--++-.+...+- ...-|+.|.   |.....+..+.+.+.+.++...+..-...|+  ..|||-|..|-+.
T Consensus       183 PYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVE  262 (376)
T KOG1372|consen  183 PYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVE  262 (376)
T ss_pred             hhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHH
Confidence            999999877665544433332 233444443   3222112222222333333222333333454  6899999999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCc-----------cccCC---CCCCCCcc
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSA-----------SSVDR---GVQSPADI  289 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~-----------~~~~~---~~~~~~~~  289 (320)
                      +++.+++++.+.      -|-+++|+..|++|+++.-...+|....+...-..           .....   ++......
T Consensus       263 AMW~mLQ~d~Pd------DfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~L  336 (376)
T KOG1372|consen  263 AMWLMLQQDSPD------DFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTL  336 (376)
T ss_pred             HHHHHHhcCCCC------ceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhh
Confidence            999999987654      58999999999999999988888754322100000           00111   11123445


Q ss_pred             ccChHHHHhhcCCCc-cCHHHHHHHHHhh
Q 020880          290 SMDITKLVQTLNIDP-VTYKDGVKLTLAA  317 (320)
Q Consensus       290 ~~d~~k~~~~lg~~~-~~~~~~l~~~i~~  317 (320)
                      .-|.+|+++.|||+| .++.+-+++++..
T Consensus       337 qGdasKAk~~LgW~pkv~f~eLVkeMv~~  365 (376)
T KOG1372|consen  337 QGDASKAKKTLGWKPKVTFPELVKEMVAS  365 (376)
T ss_pred             cCChHHHHHhhCCCCccCHHHHHHHHHHh
Confidence            679999999999999 8999999999864

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.96  E-value=1.7e-28  Score=210.08  Aligned_cols=260  Identities=12%  Similarity=0.119  Sum_probs=181.5

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH---HhCC-CCEE
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL---KFGQ-PDVV   80 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~~~-~d~V   80 (320)
                      +||||||||+||++++++|+++|   ++|++++|++++...      .+++.+.+|+.|++++.++++   .+.+ +|.|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g---~~V~~~~R~~~~~~~------~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v   71 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAAS---VPFLVASRSSSSSAG------PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAV   71 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCC---CcEEEEeCCCccccC------CCCccccccCCCHHHHHHHHhcccCcCCceeEE
Confidence            49999999999999999999999   889999999765421      245668899999999998883   1226 9999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK  160 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  160 (320)
                      +|+++...      +..       ... .+++++|++.|+++||++||..++..                 +..+...|+
T Consensus        72 ~~~~~~~~------~~~-------~~~-~~~i~aa~~~gv~~~V~~Ss~~~~~~-----------------~~~~~~~~~  120 (285)
T TIGR03649        72 YLVAPPIP------DLA-------PPM-IKFIDFARSKGVRRFVLLSASIIEKG-----------------GPAMGQVHA  120 (285)
T ss_pred             EEeCCCCC------Chh-------HHH-HHHHHHHHHcCCCEEEEeeccccCCC-----------------CchHHHHHH
Confidence            99986421      000       111 48999999999999999998765321                 012345677


Q ss_pred             HHHHH-cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhcccccc
Q 020880          161 FIYEK-CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM  239 (320)
Q Consensus       161 ~~~~~-~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~  239 (320)
                      ++++. +.+++++||+.+++....     ..   ........+..+...|++.++|||++|+|+++..++..+..    .
T Consensus       121 ~l~~~~gi~~tilRp~~f~~~~~~-----~~---~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~----~  188 (285)
T TIGR03649       121 HLDSLGGVEYTVLRPTWFMENFSE-----EF---HVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVA----P  188 (285)
T ss_pred             HHHhccCCCEEEEeccHHhhhhcc-----cc---cccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCc----C
Confidence            77775 889999999999864311     00   01111112332222356789999999999999999987432    2


Q ss_pred             CceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccC-----CCCC--------------CCCccccChHHHHhhc
Q 020880          240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD-----RGVQ--------------SPADISMDITKLVQTL  300 (320)
Q Consensus       240 ~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~-----~~~~--------------~~~~~~~d~~k~~~~l  300 (320)
                      ++.|++.+++.+|+.|+++.+.+.+|++.... .++...+.     .+..              ........+...++.+
T Consensus       189 ~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~-~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  267 (285)
T TIGR03649       189 NTDYVVLGPELLTYDDVAEILSRVLGRKITHV-KLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVRLNDVVKAVT  267 (285)
T ss_pred             CCeEEeeCCccCCHHHHHHHHHHHhCCceEEE-eCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCccccccchHHHHh
Confidence            45899999999999999999999999876543 22211110     0000              0111112356667779


Q ss_pred             CCCccCHHHHHHHHHhh
Q 020880          301 NIDPVTYKDGVKLTLAA  317 (320)
Q Consensus       301 g~~~~~~~~~l~~~i~~  317 (320)
                      |.+|+++++.+++....
T Consensus       268 G~~p~~~~~~~~~~~~~  284 (285)
T TIGR03649       268 GSKPRGFRDFAESNKAL  284 (285)
T ss_pred             CcCCccHHHHHHHhhhc
Confidence            99999999999987654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK12320 hypothetical protein; Provisional

Probab=99.96  E-value=1.7e-27  Score=220.16  Aligned_cols=236  Identities=13%  Similarity=0.134  Sum_probs=168.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |||||||||||||++|+++|+++|   ++|++++|.+...      ....++++.+|++|+. +.+++.   ++|+||||
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G---~~Vi~ldr~~~~~------~~~~ve~v~~Dl~d~~-l~~al~---~~D~VIHL   67 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAG---HTVSGIAQHPHDA------LDPRVDYVCASLRNPV-LQELAG---EADAVIHL   67 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC---CEEEEEeCChhhc------ccCCceEEEccCCCHH-HHHHhc---CCCEEEEc
Confidence            479999999999999999999999   8899999864321      1235788999999974 555555   89999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIY  163 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~  163 (320)
                      |+....        ....+|+.++. +++++|++.++ ++||+||.  +|..             ..|.    .+|.++.
T Consensus        68 Aa~~~~--------~~~~vNv~Gt~-nLleAA~~~Gv-RiV~~SS~--~G~~-------------~~~~----~aE~ll~  118 (699)
T PRK12320         68 APVDTS--------APGGVGITGLA-HVANAAARAGA-RLLFVSQA--AGRP-------------ELYR----QAETLVS  118 (699)
T ss_pred             CccCcc--------chhhHHHHHHH-HHHHHHHHcCC-eEEEEECC--CCCC-------------cccc----HHHHHHH
Confidence            986321        11257888885 99999999998 79999986  3321             0122    4788888


Q ss_pred             HHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCcee
Q 020880          164 EKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL  243 (320)
Q Consensus       164 ~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~  243 (320)
                      .++.+++++|++++|||+.... ...++..++.... .++++.        +||++|++++++.+++...      .++|
T Consensus       119 ~~~~p~~ILR~~nVYGp~~~~~-~~r~I~~~l~~~~-~~~pI~--------vIyVdDvv~alv~al~~~~------~Giy  182 (699)
T PRK12320        119 TGWAPSLVIRIAPPVGRQLDWM-VCRTVATLLRSKV-SARPIR--------VLHLDDLVRFLVLALNTDR------NGVV  182 (699)
T ss_pred             hcCCCEEEEeCceecCCCCccc-HhHHHHHHHHHHH-cCCceE--------EEEHHHHHHHHHHHHhCCC------CCEE
Confidence            7778999999999999965321 1123333443322 355554        4999999999999987521      2399


Q ss_pred             EecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHH
Q 020880          244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYK  308 (320)
Q Consensus       244 n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~  308 (320)
                      |+++++.+|+.|+++.+........    ..       .........-|.+..+..++|.| ..++
T Consensus       183 NIG~~~~~Si~el~~~i~~~~p~~~----~~-------~~~~~~~~~pdi~~a~~~~~w~~~~~~~  237 (699)
T PRK12320        183 DLATPDTTNVVTAWRLLRSVDPHLR----TR-------RVRSWEQLIPEVDIAAVQEDWNFEFGWQ  237 (699)
T ss_pred             EEeCCCeeEHHHHHHHHHHhCCCcc----cc-------ccccHHHhCCCCchhhhhcCCCCcchHH
Confidence            9999999999999998877522111    10       11122334567777777789999 5554

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.95  E-value=6.1e-27  Score=196.06  Aligned_cols=210  Identities=23%  Similarity=0.212  Sum_probs=130.3

Q ss_pred             EEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC---hhhhhhh-------------CCCcceEEEeeCCCcc------
Q 020880            8 VVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL---PQLLLDA-------------LPHSFVFFDVDLKSGS------   65 (320)
Q Consensus         8 ItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~---~~~~~~~-------------~~~~~~~~~~Dl~d~~------   65 (320)
                      |||||||+|++|+++|++++.. .+|++++|..+.   .+++.+.             ...+++++.+|++++.      
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~-~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~   79 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPD-VKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE   79 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-T-TEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCC-cEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence            7999999999999999999854 289999998754   2223211             1468999999999865      


Q ss_pred             cHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcc----
Q 020880           66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKE----  141 (320)
Q Consensus        66 ~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E----  141 (320)
                      .+.++.+   ++|+||||||..+...   +.+...+.|+.|+. ++++.|.+.+.++|+|+||+.+.+.....+.|    
T Consensus        80 ~~~~L~~---~v~~IiH~Aa~v~~~~---~~~~~~~~NV~gt~-~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~  152 (249)
T PF07993_consen   80 DYQELAE---EVDVIIHCAASVNFNA---PYSELRAVNVDGTR-NLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYP  152 (249)
T ss_dssp             HHHHHHH---H--EEEE--SS-SBS----S--EEHHHHHHHHH-HHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-H
T ss_pred             Hhhcccc---ccceeeecchhhhhcc---cchhhhhhHHHHHH-HHHHHHHhccCcceEEeccccccCCCCCcccccccc
Confidence            3555555   7899999999876532   44567899999995 99999997776699999997666654433321    


Q ss_pred             ---c---CCCCCcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCC-hHHHHHHHHhcCCceEeecC
Q 020880          142 ---E---DEIAPVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSL-PIQWIDSVLSKGEKVEFFHD  210 (320)
Q Consensus       142 ---~---~~~~p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  210 (320)
                         .   ......+.|..||+.+|+++++.    +.+++|+||+.|+|....+...... ...++...+..+......++
T Consensus       153 ~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~  232 (249)
T PF07993_consen  153 EEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGD  232 (249)
T ss_dssp             HH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB-
T ss_pred             cccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCC
Confidence               1   12345679999999999999876    5789999999999954433333322 44455555554544434443


Q ss_pred             --cccCceeHHHHHHHH
Q 020880          211 --ECRCPVYVRDVVKII  225 (320)
Q Consensus       211 --~~~~~i~v~D~a~~~  225 (320)
                        ...+++.|+.+|+++
T Consensus       233 ~~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  233 PDARLDLVPVDYVARAI  249 (249)
T ss_dssp             --TT--EEEHHHHHHHH
T ss_pred             CCceEeEECHHHHHhhC
Confidence              468999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.95  E-value=3.8e-26  Score=191.74  Aligned_cols=227  Identities=16%  Similarity=0.158  Sum_probs=161.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCc-ccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG-SGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~~~~d~Vi   81 (320)
                      +|+|+||||||+||++++++|+++|   ++|+++.|+.++....... ..+++++.+|++|. +.+.+.+.  .++|+||
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~l~~~~~--~~~d~vi   90 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKG---FAVKAGVRDVDKAKTSLPQ-DPSLQIVRADVTEGSDKLVEAIG--DDSDAVI   90 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCC---CEEEEEecCHHHHHHhccc-CCceEEEEeeCCCCHHHHHHHhh--cCCCEEE
Confidence            6899999999999999999999999   8999999987654433222 23578899999984 44444431  3799999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccC-CCCCcchHHHHHHHHH
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEED-EIAPVNVYGKSKVAAE  159 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~-~~~p~~~Y~~sK~~~e  159 (320)
                      |+++....    .++...+++|..++. ++++++++.++++||++||..+|+.... +.++.. ..++...|..+|..+|
T Consensus        91 ~~~g~~~~----~~~~~~~~~n~~~~~-~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e  165 (251)
T PLN00141         91 CATGFRRS----FDPFAPWKVDNFGTV-NLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAE  165 (251)
T ss_pred             ECCCCCcC----CCCCCceeeehHHHH-HHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHH
Confidence            99886421    123344677888875 9999999999999999999999985432 222211 1122334556799999


Q ss_pred             HHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC-cccCceeHHHHHHHHHHHHhhhhccccc
Q 020880          160 KFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCPVYVRDVVKIILALTNRWLSEDKQ  238 (320)
Q Consensus       160 ~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~  238 (320)
                      +++++.+.+++++||+.++++...                  +......+. ....+|+.+|+|+++..++..+...   
T Consensus       166 ~~l~~~gi~~~iirpg~~~~~~~~------------------~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~---  224 (251)
T PLN00141        166 KYIRKSGINYTIVRPGGLTNDPPT------------------GNIVMEPEDTLYEGSISRDQVAEVAVEALLCPESS---  224 (251)
T ss_pred             HHHHhcCCcEEEEECCCccCCCCC------------------ceEEECCCCccccCcccHHHHHHHHHHHhcChhhc---
Confidence            999988999999999999976421                  000000111 1235799999999999999875433   


Q ss_pred             cCceeEecC---CCCcCHHHHHHHHHH
Q 020880          239 MQLLLNVGG---PDRVSRVQMAEVVAE  262 (320)
Q Consensus       239 ~~~~~n~~~---~~~~s~~e~~~~i~~  262 (320)
                       +.++.+.+   +...++.+++..+++
T Consensus       225 -~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        225 -YKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             -CcEEEEecCCCCCchhHHHHHHHhhc
Confidence             33677765   334899999888764

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.94  E-value=4.8e-26  Score=194.07  Aligned_cols=236  Identities=16%  Similarity=0.179  Sum_probs=170.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~d   78 (320)
                      .|++|||||+|+||++++++|+++|   +.|+++.|+++....+....+.++.++.+|++|.+++.++++.    ++++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARG---DRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999   8899999987665555554455788899999999988776653    45789


Q ss_pred             EEEECCCccCcccc----ccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           79 VVVNCAALSVPRVC----ENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        79 ~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      +|||+||.......    ..+++..+++|+.+++ ++++++    ++.+.+++|++||......          ..+.+.
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~-~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~~~~~  147 (276)
T PRK06482         79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSI-QVIRAALPHLRRQGGGRIVQVSSEGGQIA----------YPGFSL  147 (276)
T ss_pred             EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCEEEEEcCcccccC----------CCCCch
Confidence            99999998654322    2234567889999996 888886    5566779999999764322          124678


Q ss_pred             HHHHHHHHHHHHHHH-------cCCeeEEeeccc---ccCCCCCCC----CCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          151 YGKSKVAAEKFIYEK-------CSNFAILRSSII---YGPQTISPV----PKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v---~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                      |+.+|...|.+++.+       +.+++++||+.+   ||++.....    ....+...+...+..+ .+.+       +.
T Consensus       148 Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~  219 (276)
T PRK06482        148 YHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADG-SFAI-------PG  219 (276)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhc-cCCC-------CC
Confidence            999999999877654       456789999988   665432110    1111222233333222 1221       46


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhC
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRG  265 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~  265 (320)
                      +++|++++++.++..+..     +..||+++++..+..++++.+.+.++
T Consensus       220 d~~~~~~a~~~~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        220 DPQKMVQAMIASADQTPA-----PRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             CHHHHHHHHHHHHcCCCC-----CeEEecChHHHHHHHHHHHHHHHHHH
Confidence            899999999999876422     23799999988999998888877765

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.94  E-value=8.2e-26  Score=181.21  Aligned_cols=229  Identities=21%  Similarity=0.250  Sum_probs=184.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC--CcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--HSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      -.+-|+|||||+|++++.+|.+.|   ..|+...|.++.-...++-++  ..+-+...|+.|+++++++.+   ...+||
T Consensus        62 iVaTVFGAtGFlGryvvnklak~G---SQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk---~sNVVI  135 (391)
T KOG2865|consen   62 IVATVFGATGFLGRYVVNKLAKMG---SQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVK---HSNVVI  135 (391)
T ss_pred             eEEEEecccccccHHHHHHHhhcC---CeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHH---hCcEEE
Confidence            456789999999999999999999   899999998766544444333  356678899999999999998   679999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHH
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKF  161 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~  161 (320)
                      |+.|.-..    ...-...++|+.++ ++++..|++.|+.||||+|+...-            ....+-|-.+|.+.|..
T Consensus       136 NLIGrd~e----Tknf~f~Dvn~~~a-erlAricke~GVerfIhvS~Lgan------------v~s~Sr~LrsK~~gE~a  198 (391)
T KOG2865|consen  136 NLIGRDYE----TKNFSFEDVNVHIA-ERLARICKEAGVERFIHVSCLGAN------------VKSPSRMLRSKAAGEEA  198 (391)
T ss_pred             Eeeccccc----cCCcccccccchHH-HHHHHHHHhhChhheeehhhcccc------------ccChHHHHHhhhhhHHH
Confidence            99986322    22345677899998 599999999999999999987621            23456799999999999


Q ss_pred             HHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCc---ccCceeHHHHHHHHHHHHhhhhccccc
Q 020880          162 IYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDE---CRCPVYVRDVVKIILALTNRWLSEDKQ  238 (320)
Q Consensus       162 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~v~D~a~~~~~~~~~~~~~~~~  238 (320)
                      +++.-.+.+|+||+.+||..+.      ++ +......++-..+++++.+   ...+|||-|+|.+++.++..+.+.   
T Consensus       199 VrdafPeAtIirPa~iyG~eDr------fl-n~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~---  268 (391)
T KOG2865|consen  199 VRDAFPEATIIRPADIYGTEDR------FL-NYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSM---  268 (391)
T ss_pred             HHhhCCcceeechhhhcccchh------HH-HHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCcccc---
Confidence            9999999999999999998763      11 3333444445566676654   678999999999999999997544   


Q ss_pred             cCceeEecCCCCcCHHHHHHHHHHHhCC
Q 020880          239 MQLLLNVGGPDRVSRVQMAEVVAEIRGY  266 (320)
Q Consensus       239 ~~~~~n~~~~~~~s~~e~~~~i~~~~~~  266 (320)
                       +++|.++++..+.+.|+++.+.+...+
T Consensus       269 -Gktye~vGP~~yql~eLvd~my~~~~~  295 (391)
T KOG2865|consen  269 -GKTYEFVGPDRYQLSELVDIMYDMARE  295 (391)
T ss_pred             -CceeeecCCchhhHHHHHHHHHHHHhh
Confidence             559999999999999999999887765

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.94  E-value=1.7e-25  Score=179.01  Aligned_cols=183  Identities=23%  Similarity=0.289  Sum_probs=143.9

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEECCC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAA   85 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a~   85 (320)
                      |+|+||||++|++++++|+++|   ++|++++|++++...     ..+++++.+|+.|++++.+++.   ++|+|||+++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~---~~V~~~~R~~~~~~~-----~~~~~~~~~d~~d~~~~~~al~---~~d~vi~~~~   69 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRG---HEVTALVRSPSKAED-----SPGVEIIQGDLFDPDSVKAALK---GADAVIHAAG   69 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGHHH-----CTTEEEEESCTTCHHHHHHHHT---TSSEEEECCH
T ss_pred             eEEECCCChHHHHHHHHHHHCC---CEEEEEecCchhccc-----ccccccceeeehhhhhhhhhhh---hcchhhhhhh
Confidence            7999999999999999999999   899999999876654     4679999999999999988887   8999999996


Q ss_pred             ccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH
Q 020880           86 LSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK  165 (320)
Q Consensus        86 ~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~  165 (320)
                      ....       +      ...+ .++++++++.+++++|++||..+|+............. ...|...|..+|+.+++.
T Consensus        70 ~~~~-------~------~~~~-~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~  134 (183)
T PF13460_consen   70 PPPK-------D------VDAA-KNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPI-FPEYARDKREAEEALRES  134 (183)
T ss_dssp             STTT-------H------HHHH-HHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGG-GHHHHHHHHHHHHHHHHS
T ss_pred             hhcc-------c------cccc-ccccccccccccccceeeeccccCCCCCcccccccccc-hhhhHHHHHHHHHHHHhc
Confidence            5321       1      2233 48999999999999999999999986554322111111 257899999999999988


Q ss_pred             cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhh
Q 020880          166 CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR  231 (320)
Q Consensus       166 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  231 (320)
                      +.+|+++||+.+||+...   ...+        ...      .+....++|+.+|+|++++.++++
T Consensus       135 ~~~~~ivrp~~~~~~~~~---~~~~--------~~~------~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  135 GLNWTIVRPGWIYGNPSR---SYRL--------IKE------GGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             TSEEEEEEESEEEBTTSS---SEEE--------ESS------TSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECcEeEeCCCc---ceeE--------Eec------cCCCCcCcCCHHHHHHHHHHHhCC
Confidence            899999999999998742   1000        000      223455899999999999999874

...

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.93  E-value=1.5e-24  Score=222.00  Aligned_cols=253  Identities=19%  Similarity=0.199  Sum_probs=177.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhcc--CCCceEEEecCCCCChhh---hhh----------hCCCcceEEEeeCCCcc--
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIE--GKPYDVAATHHSTPLPQL---LLD----------ALPHSFVFFDVDLKSGS--   65 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g--~~v~~v~~~~r~~~~~~~---~~~----------~~~~~~~~~~~Dl~d~~--   65 (320)
                      .++|||||||||||++++++|++++  +. ++|+++.|.......   +..          ....+++++.+|++++.  
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~-~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSN-FKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCC-cEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            4789999999999999999999886  33 789999997544322   111          11236888999998653  


Q ss_pred             ----cHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-----
Q 020880           66 ----GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-----  136 (320)
Q Consensus        66 ----~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-----  136 (320)
                          .+.++..   ++|+|||+|+..+..   .........|+.++. ++++.|.+.++++++|+||.++|+...     
T Consensus      1050 l~~~~~~~l~~---~~d~iiH~Aa~~~~~---~~~~~~~~~nv~gt~-~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~ 1122 (1389)
T TIGR03443      1050 LSDEKWSDLTN---EVDVIIHNGALVHWV---YPYSKLRDANVIGTI-NVLNLCAEGKAKQFSFVSSTSALDTEYYVNLS 1122 (1389)
T ss_pred             cCHHHHHHHHh---cCCEEEECCcEecCc---cCHHHHHHhHHHHHH-HHHHHHHhCCCceEEEEeCeeecCcccccchh
Confidence                3444443   899999999986532   123344567999995 999999999889999999999996421     


Q ss_pred             --------CCCcccCC-----CCCcchHHHHHHHHHHHHHHH---cCCeeEEeecccccCCCCCCC-CCCChHHHHHHHH
Q 020880          137 --------SFYKEEDE-----IAPVNVYGKSKVAAEKFIYEK---CSNFAILRSSIIYGPQTISPV-PKSLPIQWIDSVL  199 (320)
Q Consensus       137 --------~~~~E~~~-----~~p~~~Y~~sK~~~e~~~~~~---~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~  199 (320)
                              ..+.|+.+     ..+.+.|+.||+.+|++++.+   +.+++++||+.|||+...... ...++..++....
T Consensus      1123 ~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~ 1202 (1389)
T TIGR03443      1123 DELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCI 1202 (1389)
T ss_pred             hhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHH
Confidence                    12444432     224567999999999998875   568899999999999754321 1122222332222


Q ss_pred             hcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCC
Q 020880          200 SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYST  268 (320)
Q Consensus       200 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~  268 (320)
                      ..+. + ..+.+.++|++++|+|++++.++.++...  ..+.+||++++..+++.++++.+.+. |.+.
T Consensus      1203 ~~~~-~-p~~~~~~~~~~Vddva~ai~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~ 1266 (1389)
T TIGR03443      1203 QLGL-I-PNINNTVNMVPVDHVARVVVAAALNPPKE--SELAVAHVTGHPRIRFNDFLGTLKTY-GYDV 1266 (1389)
T ss_pred             HhCC-c-CCCCCccccccHHHHHHHHHHHHhCCccc--CCCCEEEeCCCCCCcHHHHHHHHHHh-CCCC
Confidence            1111 1 11235789999999999999998764211  12458999999899999999999764 5543

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2e-24  Score=184.00  Aligned_cols=240  Identities=16%  Similarity=0.106  Sum_probs=169.5

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQ   76 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~   76 (320)
                      |++|+||||||+|+||++++++|+++|   ++|++++|+.+....+.+..+..+.++.+|++|++++.++++.    +++
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERG---DRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGR   77 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            777899999999999999999999999   8899999987666555554455677889999999988776654    357


Q ss_pred             CCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           77 PDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        77 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      +|+||||||.....    ....+++..+++|+.+++ .+++.+    ++.+.+++|++||.+.+.+..          ..
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------~~  146 (275)
T PRK08263         78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGAL-WVTQAVLPYLREQRSGHIIQISSIGGISAFP----------MS  146 (275)
T ss_pred             CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCEEEEEcChhhcCCCC----------Cc
Confidence            99999999986442    223455778899999985 666654    556667999999988775432          25


Q ss_pred             chHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCC-ChH--HHHHHHHhcCCceEeecCcccCc-ee
Q 020880          149 NVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKS-LPI--QWIDSVLSKGEKVEFFHDECRCP-VY  217 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~-i~  217 (320)
                      +.|+.+|...+.+.+.+       +.++.++||+.+..+......... ...  .-+...+...       .....+ ++
T Consensus       147 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  219 (275)
T PRK08263        147 GIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ-------WSERSVDGD  219 (275)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH-------HHhccCCCC
Confidence            68999999988876553       467889999988765431110000 000  0011111000       012245 88


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRG  265 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~  265 (320)
                      .+|++++++.+++.+...    ...++..++..+++.++.+.+.+..+
T Consensus       220 p~dva~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (275)
T PRK08263        220 PEAAAEALLKLVDAENPP----LRLFLGSGVLDLAKADYERRLATWEE  263 (275)
T ss_pred             HHHHHHHHHHHHcCCCCC----eEEEeCchHHHHHHHHHHHHHHHHHH
Confidence            999999999999875333    23555555567999999999888643

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=8.3e-24  Score=177.46  Aligned_cols=222  Identities=15%  Similarity=0.160  Sum_probs=157.2

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhh-hh---hhCCCcceEEEeeCCCcccHHHHHHHh--
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LL---DALPHSFVFFDVDLKSGSGFDAVALKF--   74 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~-~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   74 (320)
                      |++|+||||||||+||++|+++|+++|   ++|+.+.|+...... +.   ...+.++.++.+|+.|++++.++++.+  
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   80 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAG---ADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVE   80 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHH
Confidence            446799999999999999999999999   777777776543222 11   122456788999999999988877643  


Q ss_pred             --CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCC
Q 020880           75 --GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        75 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                        +++|+|||+||......    ...+++..++.|+.+.+ ++++.+    ++.+.+++|++||...+.+.         
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~---------  150 (249)
T PRK12825         81 RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVF-HLLRAVVPPMRKQRGGRIVNISSVAGLPGW---------  150 (249)
T ss_pred             HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCEEEEECccccCCCC---------
Confidence              57899999999654432    22344677889999885 777766    55677899999998876432         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       .+...|+.+|...+.+++.+       +.+++++||+.++|+.....    .......    . .+    ......+++
T Consensus       151 -~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~----~~~~~~~----~-~~----~~~~~~~~~  216 (249)
T PRK12825        151 -PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT----IEEAREA----K-DA----ETPLGRSGT  216 (249)
T ss_pred             -CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc----cchhHHh----h-hc----cCCCCCCcC
Confidence             23568999999998877543       45789999999999864321    1111111    0 00    111233899


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      .+|+++++.+++.....  ...+.+|+++++..+
T Consensus       217 ~~dva~~~~~~~~~~~~--~~~g~~~~i~~g~~~  248 (249)
T PRK12825        217 PEDIARAVAFLCSDASD--YITGQVIEVTGGVDV  248 (249)
T ss_pred             HHHHHHHHHHHhCcccc--CcCCCEEEeCCCEee
Confidence            99999999999976421  234669999987543

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.92  E-value=3.5e-24  Score=180.25  Aligned_cols=254  Identities=20%  Similarity=0.187  Sum_probs=169.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC---hhhhhhh----------CCCcceEEEeeCCCcc-----
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL---PQLLLDA----------LPHSFVFFDVDLKSGS-----   65 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~---~~~~~~~----------~~~~~~~~~~Dl~d~~-----   65 (320)
                      ++||+||||||+|.+|+.+|+.+-+  .+|++++|.++.   ..++...          ...+++.+-+|+..+.     
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~   78 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSE   78 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCH
Confidence            4799999999999999999998864  689999998763   2233222          2367888999998554     


Q ss_pred             -cHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-----CC
Q 020880           66 -GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-----FY  139 (320)
Q Consensus        66 -~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-----~~  139 (320)
                       .+.++.+   .+|.|||+|+..+.-   .+.......||.|+. .+++.|....+|.+.|+||++|+.....     ..
T Consensus        79 ~~~~~La~---~vD~I~H~gA~Vn~v---~pYs~L~~~NVlGT~-evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~  151 (382)
T COG3320          79 RTWQELAE---NVDLIIHNAALVNHV---FPYSELRGANVLGTA-EVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDF  151 (382)
T ss_pred             HHHHHHhh---hcceEEecchhhccc---CcHHHhcCcchHhHH-HHHHHHhcCCCceeEEEeeeeeccccccCCCcccc
Confidence             3555555   799999999987542   234667889999995 9999999999989999999999874322     12


Q ss_pred             cccCC-----CCCcchHHHHHHHHHHHHHHH---cCCeeEEeecccccCCCCCCCC-CCChHHHHHHHHhcCCceEeecC
Q 020880          140 KEEDE-----IAPVNVYGKSKVAAEKFIYEK---CSNFAILRSSIIYGPQTISPVP-KSLPIQWIDSVLSKGEKVEFFHD  210 (320)
Q Consensus       140 ~E~~~-----~~p~~~Y~~sK~~~e~~~~~~---~~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  210 (320)
                      +|+++     ..+.+.|++||+.+|.++++.   +.+++|+||+.|.|+...+... ..++.+++...+.-|.-...  .
T Consensus       152 ~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~--~  229 (382)
T COG3320         152 DEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDS--E  229 (382)
T ss_pred             ccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCc--c
Confidence            22222     345689999999999999886   5689999999999998743332 33444555544432222111  1


Q ss_pred             cccCceeHHHHHHHHHHHHhhhh----c---cccccCceeE-ecCCCCcCHHHHHHHHHH--HhCCCC
Q 020880          211 ECRCPVYVRDVVKIILALTNRWL----S---EDKQMQLLLN-VGGPDRVSRVQMAEVVAE--IRGYST  268 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~~~----~---~~~~~~~~~n-~~~~~~~s~~e~~~~i~~--~~~~~~  268 (320)
                      ...+.+.++++++++........    .   ..+..+..|+ ..-|..+.+.++.+.+.+  ..+.+.
T Consensus       230 ~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~~~~a~~~~  297 (382)
T COG3320         230 YSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLISLDIAGYPE  297 (382)
T ss_pred             cchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhhhhccCCch
Confidence            12233333333333332222221    0   0112223344 333678999999998887  444443

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.92  E-value=1e-23  Score=178.37  Aligned_cols=225  Identities=14%  Similarity=0.113  Sum_probs=156.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHHh----C
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALKF----G   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----~   75 (320)
                      ++++|||||+|+||+++++.|+++|   ++|+++.|+++......+.   .+..+.++.+|++|.+.+.++++..    +
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARAG---AAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC---CeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999   8899999987655444432   2345677899999999988777643    4


Q ss_pred             CCCEEEECCCccCccc----cccCchhhhhccccccH---HHHHhhh-hhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPRV----CENDPDSAMSINVPSSL---VNWLSSF-TENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~---~~~l~~~-~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++|+||||||...+..    ....++..+++|+.+++   .++++.+ ++.+.+++|++||...+...          .+
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~----------~~  153 (262)
T PRK13394         84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS----------PL  153 (262)
T ss_pred             CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC----------CC
Confidence            6999999999864321    12334566789998842   2567777 66677899999997654321          23


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCC------ChHHHHHHHHhcCCceEeecCcccC
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKS------LPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                      .+.|+.+|...+.+++.+       +.++.++||+.++++.........      .....+...+..       +...++
T Consensus       154 ~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~  226 (262)
T PRK13394        154 KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG-------KTVDGV  226 (262)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhc-------CCCCCC
Confidence            568999999999877654       345788999999988532110000      000111111111       223467


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |++++|++++++.++......  ..+..|+++++.
T Consensus       227 ~~~~~dva~a~~~l~~~~~~~--~~g~~~~~~~g~  259 (262)
T PRK13394        227 FTTVEDVAQTVLFLSSFPSAA--LTGQSFVVSHGW  259 (262)
T ss_pred             CCCHHHHHHHHHHHcCccccC--CcCCEEeeCCce
Confidence            999999999999998764321  235588988764

>PRK09135 pteridine reductase; Provisional

Probab=99.92  E-value=3.3e-23  Score=173.91  Aligned_cols=221  Identities=18%  Similarity=0.214  Sum_probs=152.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhh----hCCCcceEEEeeCCCcccHHHHHHH----
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLD----ALPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      .++||||||+|+||++++++|+++|   ++|+++.|+... ...+..    ..+..+.++.+|++|.+++..+++.    
T Consensus         6 ~~~vlItGa~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          6 AKVALITGGARRIGAAIARTLHAAG---YRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3789999999999999999999999   899999987433 222221    1123577889999999988877764    


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc---cCceEEEeechhhhcccCCCCcccCCCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN---KENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~---~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++++|+|||+||.....    ....+++..+++|+.++. ++++++.+.   ....++.+|+..          +..+..
T Consensus        83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~-~l~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~  151 (249)
T PRK09135         83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPF-FLSQAAAPQLRKQRGAIVNITDIH----------AERPLK  151 (249)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHH-HHHHHHHHHHhhCCeEEEEEeChh----------hcCCCC
Confidence            35789999999975432    122345778899999996 898888532   122566665532          223456


Q ss_pred             CcchHHHHHHHHHHHHHHHc------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          147 PVNVYGKSKVAAEKFIYEKC------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      |.+.|+.+|..+|.+++.+.      .+++++||+.++||.....    +......... .+.++.       .+.+++|
T Consensus       152 ~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~----~~~~~~~~~~-~~~~~~-------~~~~~~d  219 (249)
T PRK09135        152 GYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNS----FDEEARQAIL-ARTPLK-------RIGTPED  219 (249)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcccccc----CCHHHHHHHH-hcCCcC-------CCcCHHH
Confidence            78899999999999887642      4678899999999975321    1112222222 222222       1346899


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      +|+++.+++...   ....+.+||++++..++
T Consensus       220 ~a~~~~~~~~~~---~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        220 IAEAVRFLLADA---SFITGQILAVDGGRSLT  248 (249)
T ss_pred             HHHHHHHHcCcc---ccccCcEEEECCCeecc
Confidence            999997776542   12245699999987654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.91  E-value=1.7e-23  Score=175.89  Aligned_cols=221  Identities=12%  Similarity=0.041  Sum_probs=157.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHHh----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      ++|+|+||||+|+||.+++++|+++|   ++|++++|+.++.......   ....+.++.+|+.|++++.++++..    
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADG---AEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            45799999999999999999999999   8999999986544333222   2345788999999999888877643    


Q ss_pred             CCCCEEEECCCccCc----cccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVP----RVCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +.+|+|||+|+...+    .....++...++.|+.+++ ++++++    .+.+.+++|++||...++.         +..
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~ii~~ss~~~~~~---------~~~  151 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTF-LLTQAALPALIRAGGGRIVLTSSVAGPRV---------GYP  151 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCcEEEEEechHhhcc---------CCC
Confidence            479999999988654    2223345677889999985 777766    3455679999999887621         122


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|..++.+++.+       +.+++++||+.++|+.......     ..+........++       ..+++++
T Consensus       152 ~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-----~~~~~~~~~~~~~-------~~~~~~~  219 (251)
T PRK12826        152 GLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD-----AQWAEAIAAAIPL-------GRLGEPE  219 (251)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc-----hHHHHHHHhcCCC-------CCCcCHH
Confidence            3568999999999877664       4567899999999986432111     1111122222222       2479999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+|+++..++......  ..+.+|++.+|.
T Consensus       220 dva~~~~~l~~~~~~~--~~g~~~~~~~g~  247 (251)
T PRK12826        220 DIAAAVLFLASDEARY--ITGQTLPVDGGA  247 (251)
T ss_pred             HHHHHHHHHhCccccC--cCCcEEEECCCc
Confidence            9999999988654221  235689998764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.91  E-value=1.4e-23  Score=176.86  Aligned_cols=222  Identities=14%  Similarity=0.117  Sum_probs=154.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      +|++|||||+|+||++++++|+++|   ++|+++.|+.+....+.+.   .+.++.++.+|+.|++++.++++.    ++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAG---ANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFG   77 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999   8999999987655444332   234677899999999988776654    34


Q ss_pred             CCCEEEECCCccCcccc----ccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPRVC----ENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++|+|||+|+.......    ..+.+..++.|+.+++ .+++.+    ++.+.+++|++||...+.+..          .
T Consensus        78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~-~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~----------~  146 (255)
T TIGR01963        78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAF-HTIRAALPHMKKQGWGRIINIASAHGLVASP----------F  146 (255)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCeEEEEEcchhhcCCCC----------C
Confidence            68999999997644221    1223456778998875 666655    566777999999987664321          2


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHh-cCCc-------eEeecCcc
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLS-KGEK-------VEFFHDEC  212 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~  212 (320)
                      ...|+.+|...+.+.+.+       +.+++++||+.++++....         .+..... .+..       ....+...
T Consensus       147 ~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (255)
T TIGR01963       147 KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEK---------QIADQAKTRGIPEEQVIREVMLPGQPT  217 (255)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHH---------HHHhhhcccCCCchHHHHHHHHccCcc
Confidence            468999999999877654       4567889999999875210         0000000 0000       00112345


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ++++|++|+|++++.++..+...  ..++.|+++++.
T Consensus       218 ~~~~~~~d~a~~~~~~~~~~~~~--~~g~~~~~~~g~  252 (255)
T TIGR01963       218 KRFVTVDEVAETALFLASDAAAG--ITGQAIVLDGGW  252 (255)
T ss_pred             ccCcCHHHHHHHHHHHcCccccC--ccceEEEEcCcc
Confidence            67999999999999999764221  135589998764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4e-23  Score=176.13  Aligned_cols=239  Identities=15%  Similarity=0.133  Sum_probs=165.6

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHH--
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALK--   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~--   73 (320)
                      |.+|++|||||+|+||+++++.|+++|   ++|+++.|+.+........+     ..++.++.+|++|++++..+++.  
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAG---AAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAAT   81 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            346899999999999999999999999   89999999865544333322     23577889999999988776654  


Q ss_pred             --hCCCCEEEECCCccCc--c---ccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCccc
Q 020880           74 --FGQPDVVVNCAALSVP--R---VCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        74 --~~~~d~Vih~a~~~~~--~---~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                        ++++|+|||+||....  .   ....++...+++|+.+++ ++++++.+    .+..+||++||...+.+.       
T Consensus        82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------  153 (276)
T PRK05875         82 AWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTM-YVLKHAARELVRGGGGSFVGISSIAASNTH-------  153 (276)
T ss_pred             HHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCcEEEEEechhhcCCC-------
Confidence              3579999999986422  1   122234567888999985 77666543    334589999999876432       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                         .+.+.|+.+|...|.+++.+.       .++.++||+.+.++-.......   ........ ...+       ...+
T Consensus       154 ---~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~---~~~~~~~~-~~~~-------~~~~  219 (276)
T PRK05875        154 ---RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITES---PELSADYR-ACTP-------LPRV  219 (276)
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccC---HHHHHHHH-cCCC-------CCCC
Confidence               235789999999999888653       4567899998876543111110   01111111 1111       2236


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCCCc----CHHHHHHHHHHHhCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV----SRVQMAEVVAEIRGY  266 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~----s~~e~~~~i~~~~~~  266 (320)
                      ++++|+|+++..++..+...  ..+.+++++++..+    +..|+++.+.+..+.
T Consensus       220 ~~~~dva~~~~~l~~~~~~~--~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  272 (276)
T PRK05875        220 GEVEDVANLAMFLLSDAASW--ITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL  272 (276)
T ss_pred             cCHHHHHHHHHHHcCchhcC--cCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence            78999999999999875321  23569999998775    888888887765443

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.91  E-value=2.7e-23  Score=187.00  Aligned_cols=229  Identities=14%  Similarity=0.110  Sum_probs=163.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC------------CCcceEEEeeCCCcccHHH
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL------------PHSFVFFDVDLKSGSGFDA   69 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~------------~~~~~~~~~Dl~d~~~~~~   69 (320)
                      .+++||||||+|+||++++++|+++|   ++|++++|+.++...+...+            ..++.++.+|+.|.+++.+
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G---~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~  155 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP  155 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence            46789999999999999999999999   89999999877665443321            1247789999999888877


Q ss_pred             HHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           70 VALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        70 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      .+.   ++|+|||++|....  ...++...+++|+.++. ++++++.+.++++||++||..++...   ..+. ..+...
T Consensus       156 aLg---giDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~-nLl~Aa~~agVgRIV~VSSiga~~~g---~p~~-~~~sk~  225 (576)
T PLN03209        156 ALG---NASVVICCIGASEK--EVFDVTGPYRIDYLATK-NLVDAATVAKVNHFILVTSLGTNKVG---FPAA-ILNLFW  225 (576)
T ss_pred             Hhc---CCCEEEEccccccc--cccchhhHHHHHHHHHH-HHHHHHHHhCCCEEEEEccchhcccC---cccc-chhhHH
Confidence            665   89999999986532  11245667888999985 99999999999999999998764211   1111 123345


Q ss_pred             hHHHHHHHHHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC-cccCceeHHHHHHHHHHH
Q 020880          150 VYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~  228 (320)
                      .|..+|..+|+.+...+.+++++|||.++++.+.....              +......++ .....+..+|+|++++.+
T Consensus       226 ~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t--------------~~v~~~~~d~~~gr~isreDVA~vVvfL  291 (576)
T PLN03209        226 GVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKET--------------HNLTLSEEDTLFGGQVSNLQVAELMACM  291 (576)
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccc--------------cceeeccccccCCCccCHHHHHHHHHHH
Confidence            68889999999999999999999999998874421100              000000011 112358899999999999


Q ss_pred             HhhhhccccccCceeEecCCCC---cCHHHHHHHH
Q 020880          229 TNRWLSEDKQMQLLLNVGGPDR---VSRVQMAEVV  260 (320)
Q Consensus       229 ~~~~~~~~~~~~~~~n~~~~~~---~s~~e~~~~i  260 (320)
                      +.++..   ..+.+|.+.++..   .++.+++..|
T Consensus       292 asd~~a---s~~kvvevi~~~~~p~~~~~~~~~~i  323 (576)
T PLN03209        292 AKNRRL---SYCKVVEVIAETTAPLTPMEELLAKI  323 (576)
T ss_pred             HcCchh---ccceEEEEEeCCCCCCCCHHHHHHhc
Confidence            986431   2244888887753   4455555444

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.91  E-value=6.7e-23  Score=172.97  Aligned_cols=226  Identities=15%  Similarity=0.093  Sum_probs=155.6

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHHh---
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      |.+++||||||||+||++++++|+++|   ++|+++.|++++...+....   +.++.++.+|++|++++.++++..   
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEG---AKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET   78 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            446899999999999999999999999   89999999877655443322   356778999999999987777643   


Q ss_pred             -CCCCEEEECCCccCccccc----cCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 -GQPDVVVNCAALSVPRVCE----NDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 -~~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                       +.+|+|||+|+........    .+.+..+++|+.+++   ..++.++++.+.++||++||...+.+.          .
T Consensus        79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~----------~  148 (258)
T PRK12429         79 FGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS----------A  148 (258)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC----------C
Confidence             4799999999976443221    233456778998854   244555556677899999998765432          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCC------ChHHHHHHHHhcCCceEeecCccc
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKS------LPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                      +.+.|+.+|...+.+.+.+       +.++.++||+.++++.........      .....+.....       .....+
T Consensus       149 ~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~  221 (258)
T PRK12429        149 GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLL-------PLVPQK  221 (258)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHh-------ccCCcc
Confidence            4678999999999877654       235678999999987642110000      00000101110       111345


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ++++++|+|++++.++......  ..++.|++++|
T Consensus       222 ~~~~~~d~a~~~~~l~~~~~~~--~~g~~~~~~~g  254 (258)
T PRK12429        222 RFTTVEEIADYALFLASFAAKG--VTGQAWVVDGG  254 (258)
T ss_pred             ccCCHHHHHHHHHHHcCccccC--ccCCeEEeCCC
Confidence            7999999999999998764321  23558998875

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.5e-23  Score=175.26  Aligned_cols=216  Identities=16%  Similarity=0.106  Sum_probs=147.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      ++|+||||||+|+||++++++|+++|   ++|++++|+.++...+....+.++.++.+|++|++++.++++.    ++++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAG---HRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCc---CEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            46789999999999999999999999   8999999987666555444445677889999999988776654    3579


Q ss_pred             CEEEECCCccCccccc----cCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPRVCE----NDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||........    .+.+..+++|+.+++ ++++++    ++.+.+++|++||...+...          .+.+
T Consensus        80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~-~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~----------~~~~  148 (277)
T PRK06180         80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAV-AMTKAVLPGMRARRRGHIVNITSMGGLITM----------PGIG  148 (277)
T ss_pred             CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHhccCCCEEEEEecccccCCC----------CCcc
Confidence            9999999986432221    223566899999986 777774    34555699999998765432          2467


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCC--CChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPK--SLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      .|+.+|...|.+++.+       +.+++++||+.+.++........  .....+. ........... ......+..++|
T Consensus       149 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~d  226 (277)
T PRK06180        149 YYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYD-ALFGPIRQARE-AKSGKQPGDPAK  226 (277)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHH-HHHHHHHHHHH-hhccCCCCCHHH
Confidence            8999999999877653       56789999999987642211100  0000110 00000000000 001123578999


Q ss_pred             HHHHHHHHHhhhh
Q 020880          221 VVKIILALTNRWL  233 (320)
Q Consensus       221 ~a~~~~~~~~~~~  233 (320)
                      +|++++.+++.+.
T Consensus       227 va~~~~~~l~~~~  239 (277)
T PRK06180        227 AAQAILAAVESDE  239 (277)
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999998753

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.6e-22  Score=170.09  Aligned_cols=224  Identities=16%  Similarity=0.117  Sum_probs=153.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC--CCcceEEEeeCCCcccHHHHHHHh----C
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFDVDLKSGSGFDAVALKF----G   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~----~   75 (320)
                      .+|+++||||+|+||++++++|+++|   ++|+++.|+.+......+..  +..+.++.+|++|++++.++++..    +
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREG---ARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWG   80 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCC---CeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            36899999999999999999999999   88999999876554443332  345778999999999988777643    5


Q ss_pred             CCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhh----hhhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSS----FTENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++|+|||+|+......    ....++..+++|+.+++ ++.+.    +++.+.+++|++||.......          .+
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~----------~~  149 (252)
T PRK06138         81 RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVF-LWAKYAIPIMQRQGGGSIVNTASQLALAGG----------RG  149 (252)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHH-HHHHHHHHHHHhcCCeEEEEECChhhccCC----------CC
Confidence            8999999999764321    22234566889999875 54444    455666799999998664321          23


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+++.+       +.+++++||+.++++..............+........+       ...+++++|
T Consensus       150 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~d  222 (252)
T PRK06138        150 RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHP-------MNRFGTAEE  222 (252)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCC-------CCCCcCHHH
Confidence            568999999999987765       457789999999887532111111001111111111111       123789999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +|++++.++.++...  ..+..+.+.++
T Consensus       223 ~a~~~~~l~~~~~~~--~~g~~~~~~~g  248 (252)
T PRK06138        223 VAQAALFLASDESSF--ATGTTLVVDGG  248 (252)
T ss_pred             HHHHHHHHcCchhcC--ccCCEEEECCC
Confidence            999999998875422  12446777654

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.90  E-value=9e-23  Score=174.31  Aligned_cols=229  Identities=17%  Similarity=0.156  Sum_probs=156.3

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHH---HHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDA---VAL   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~---~~~   72 (320)
                      |+++++|||||||+||+++++.|+++|   ++|++++|+++.........     ...+.++.+|++|++++..   +.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~   77 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKG---YLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLK   77 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHH
Confidence            777899999999999999999999999   89999999876554443221     2467889999999998766   223


Q ss_pred             HhCCCCEEEECCCccCcccc----ccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCC
Q 020880           73 KFGQPDVVVNCAALSVPRVC----ENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      .++++|+||||||...+...    ..+++..+++|+.+++ ++++++    ++.+..++|++||...+.+          
T Consensus        78 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~vsS~~~~~~----------  146 (280)
T PRK06914         78 EIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAI-SVTQAVLPYMRKQKSGKIINISSISGRVG----------  146 (280)
T ss_pred             hcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCEEEEECcccccCC----------
Confidence            34578999999997654221    2334566789999985 666664    5566679999999754322          


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCC--------CCChHHHHHHHHhcCCceEeec
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVP--------KSLPIQWIDSVLSKGEKVEFFH  209 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~  209 (320)
                      ..+.+.|+.+|...+.+++.+       +.+++++||+.+.++.......        .......+.......      .
T Consensus       147 ~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  220 (280)
T PRK06914        147 FPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHI------N  220 (280)
T ss_pred             CCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHH------h
Confidence            124668999999999987764       4578999999998873211000        000011111111000      0


Q ss_pred             CcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHH
Q 020880          210 DECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV  254 (320)
Q Consensus       210 ~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~  254 (320)
                      .....+++++|+|++++.++.++...     ..|+++++..+++.
T Consensus       221 ~~~~~~~~~~dva~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  260 (280)
T PRK06914        221 SGSDTFGNPIDVANLIVEIAESKRPK-----LRYPIGKGVKLMIL  260 (280)
T ss_pred             hhhhccCCHHHHHHHHHHHHcCCCCC-----cccccCCchHHHHH
Confidence            12235789999999999999885432     36888876655544

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.90  E-value=2.9e-22  Score=167.79  Aligned_cols=219  Identities=16%  Similarity=0.158  Sum_probs=154.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      ++|+|+||||+|+||++++++|+++|   ++|+++.|++++.......   .+..+.++.+|+.|++++.++++.    +
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADG---AKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            34799999999999999999999999   7899999987665443332   234577888999999988777764    2


Q ss_pred             CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +.+|+|||+||......    ........++.|+.+.. ++++++    .+.+.+++|++||.....+          ..
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~l~~~~~~~ii~~ss~~~~~~----------~~  149 (246)
T PRK05653         81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTF-NVVRAALPPMIKARYGRIVNISSVSGVTG----------NP  149 (246)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCcEEEEECcHHhccC----------CC
Confidence            56899999998764421    12234566889999885 777776    3556679999999765422          23


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+++.+       +.+++++||+.++|+....     +. ..+........+       .+.+++++
T Consensus       150 ~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~-----~~-~~~~~~~~~~~~-------~~~~~~~~  216 (246)
T PRK05653        150 GQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG-----LP-EEVKAEILKEIP-------LGRLGQPE  216 (246)
T ss_pred             CCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh-----hh-HHHHHHHHhcCC-------CCCCcCHH
Confidence            4668999999988877664       3467889999999986421     11 111111111111       24578999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+|+++.+++......  ..+.+|++++|.
T Consensus       217 dva~~~~~~~~~~~~~--~~g~~~~~~gg~  244 (246)
T PRK05653        217 EVANAVAFLASDAASY--ITGQVIPVNGGM  244 (246)
T ss_pred             HHHHHHHHHcCchhcC--ccCCEEEeCCCe
Confidence            9999999998653321  235589998875

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.2e-22  Score=169.04  Aligned_cols=218  Identities=20%  Similarity=0.198  Sum_probs=153.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      +|+++||||+|+||++++++|+++|   ++|+++.|+++....+.+..   ...+.++.+|++|.+++.++++.    ++
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g---~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          6 DKVAIVTGAAGGIGQAYAEALAREG---ASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999999   89999999865544433322   23566789999999988776653    35


Q ss_pred             CCCEEEECCCccCc-------cccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCcccCC
Q 020880           76 QPDVVVNCAALSVP-------RVCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        76 ~~d~Vih~a~~~~~-------~~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      .+|+|||+||....       .....+++..+++|+.+++ ++++++..    .+.+++|++||...|.           
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------  150 (250)
T PRK07774         83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGAL-VCTRAVYKHMAKRGGGAIVNQSSTAAWL-----------  150 (250)
T ss_pred             CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHHhCCcEEEEEecccccC-----------
Confidence            79999999997531       1122334567889999986 77777764    2345999999998774           


Q ss_pred             CCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                        +.+.|+.+|...|.+++.+.       ..+.+++|+.+..+.....    .+..+..... ++.+..       -+.+
T Consensus       151 --~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~----~~~~~~~~~~-~~~~~~-------~~~~  216 (250)
T PRK07774        151 --YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV----TPKEFVADMV-KGIPLS-------RMGT  216 (250)
T ss_pred             --CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc----CCHHHHHHHH-hcCCCC-------CCcC
Confidence              35689999999999887753       3467899988876654211    1112222222 222222       1467


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      ++|+|++++.++.....  ...+++||+.++..+
T Consensus       217 ~~d~a~~~~~~~~~~~~--~~~g~~~~v~~g~~~  248 (250)
T PRK07774        217 PEDLVGMCLFLLSDEAS--WITGQIFNVDGGQII  248 (250)
T ss_pred             HHHHHHHHHHHhChhhh--CcCCCEEEECCCeec
Confidence            89999999998876422  123559999987654

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.2e-22  Score=169.51  Aligned_cols=219  Identities=15%  Similarity=0.141  Sum_probs=149.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHHh----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      .+|+++||||+|+||++++++|+++|   ++|++..|+.+........   .+..+.++.+|++|.+++.++++.+    
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAG---FPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            35799999999999999999999999   8898888876544333222   2345777899999999988877643    


Q ss_pred             CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|+|||+||......    ...+++..+++|+.+++ ++++.+.    +.+..+||++||...+.+..          
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~----------  154 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGAN-RLATAVLPGMIERRRGDLIFVGSDVALRQRP----------  154 (274)
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCceEEEECChHhcCCCC----------
Confidence            57899999999754321    12234556789999986 7766654    34455899999998875431          


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...|.+++.+       +.++.++|||.+..+........ ....++......+      +...+.++|++
T Consensus       155 ~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~  227 (274)
T PRK07775        155 HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAE-VIGPMLEDWAKWG------QARHDYFLRAS  227 (274)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChh-hhhHHHHHHHHhc------ccccccccCHH
Confidence            3568999999999988765       45778999988754421111111 1111111111000      11235689999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEec
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVG  246 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~  246 (320)
                      |+|++++.++.++.     ...+||+.
T Consensus       228 dva~a~~~~~~~~~-----~~~~~~~~  249 (274)
T PRK07775        228 DLARAITFVAETPR-----GAHVVNME  249 (274)
T ss_pred             HHHHHHHHHhcCCC-----CCCeeEEe
Confidence            99999999998742     13377775

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2e-22  Score=170.63  Aligned_cols=225  Identities=18%  Similarity=0.174  Sum_probs=152.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC-CcceEEEeeCCCcccHHHHHHH----hCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLKSGSGFDAVALK----FGQ   76 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~----~~~   76 (320)
                      +.+++|||||+|+||++++++|+++|   ++|+++.|+++....+.+... ..+.++.+|++|++++.++++.    +++
T Consensus        10 ~~~~vlItGa~g~iG~~~a~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829         10 DGLRVLVTGGASGIGRAIAEAFAEAG---ARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999   889999998765554443322 2457789999999988777654    357


Q ss_pred             CCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhh----hhccC-ceEEEeechhhhcccCCCCcccCCCC
Q 020880           77 PDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSF----TENKE-NLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        77 ~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~-~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +|+|||+||...+     .....+++..++.|+.+++ ++++++    ...+. ++++++||.......          .
T Consensus        87 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~----------~  155 (264)
T PRK12829         87 LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQF-YFARAAVPLLKASGHGGVIIALSSVAGRLGY----------P  155 (264)
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhCCCCeEEEEecccccccCC----------C
Confidence            9999999997622     1222345677899999985 766665    33444 578888876543211          1


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCC------CChHHHHHHHHhcCCceEeecCccc
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPK------SLPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                      +...|+.+|...|.+++.+       +.+++++||+.++|+........      .....+..... ..       ....
T Consensus       156 ~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~  227 (264)
T PRK12829        156 GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYL-EK-------ISLG  227 (264)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHH-hc-------CCCC
Confidence            3457999999999987764       35678899999999864211000      00000110000 00       0123


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      .+++++|+|+++..++.....  ...+..|++++|..
T Consensus       228 ~~~~~~d~a~~~~~l~~~~~~--~~~g~~~~i~~g~~  262 (264)
T PRK12829        228 RMVEPEDIAATALFLASPAAR--YITGQAISVDGNVE  262 (264)
T ss_pred             CCCCHHHHHHHHHHHcCcccc--CccCcEEEeCCCcc
Confidence            589999999999888764221  12355899988754

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.90  E-value=2.7e-22  Score=169.20  Aligned_cols=227  Identities=15%  Similarity=0.135  Sum_probs=158.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----CCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----GQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~~d   78 (320)
                      ++++|||||+|+||.++++.|+++|   ++|+++.|+.+....+.+.....+.++.+|++|++++..+++.+    +.+|
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEG---ARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGID   82 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999   89999999877666655555556788999999999988777643    5799


Q ss_pred             EEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhcc-----CceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           79 VVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTENK-----ENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        79 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-----~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      +|||+||.....    ....+++..+++|+.+++ ++++++....     ..++|++||.....+          ..+..
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~~~~  151 (257)
T PRK07067         83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLF-FLMQAVARHMVEQGRGGKIINMASQAGRRG----------EALVS  151 (257)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHH-HHHHHHHHHHHhcCCCcEEEEeCCHHhCCC----------CCCCc
Confidence            999999975432    122345677899999986 8888775421     238999999653221          12467


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCC---C--CCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPV---P--KSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      .|+.+|...+.+.+.+       +.++.++||+.++++......   .  ..............       +...+.+++
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  224 (257)
T PRK07067        152 HYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGE-------AVPLGRMGV  224 (257)
T ss_pred             hhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhh-------cCCCCCccC
Confidence            8999999999887654       346788999999987431100   0  00000000000100       112457899


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      .+|+|++++.++.....  ...+.+|++++|+.+|
T Consensus       225 ~~dva~~~~~l~s~~~~--~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        225 PDDLTGMALFLASADAD--YIVAQTYNVDGGNWMS  257 (257)
T ss_pred             HHHHHHHHHHHhCcccc--cccCcEEeecCCEeCC
Confidence            99999999999876422  1235699998876543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.89  E-value=3.5e-22  Score=168.28  Aligned_cols=223  Identities=17%  Similarity=0.120  Sum_probs=156.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      +|+||||||+|+||++++++|+++|   ++|+++.|++++.....+.+   +..+.++.+|++|.+++.++++.    ++
T Consensus        10 ~k~vlItGa~g~iG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (255)
T PRK07523         10 GRRALVTGSSQGIGYALAEGLAQAG---AEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5799999999999999999999999   89999999876554443332   23477789999999998887764    35


Q ss_pred             CCCEEEECCCccCcccc----ccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPRVC----ENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      .+|+|||+||...+...    ....+..+++|+.+++ ++++++.+    .+.+++|++||.....+          ..+
T Consensus        87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~g~iv~iss~~~~~~----------~~~  155 (255)
T PRK07523         87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVF-YVGQAVARHMIARGAGKIINIASVQSALA----------RPG  155 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHhCCeEEEEEccchhccC----------CCC
Confidence            69999999998643222    2233566789999986 77777764    35569999999765432          224


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+++.+       +.++.++||+.+.++........    ..+...+....++       ..+..++|
T Consensus       156 ~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~----~~~~~~~~~~~~~-------~~~~~~~d  224 (255)
T PRK07523        156 IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD----PEFSAWLEKRTPA-------GRWGKVEE  224 (255)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC----HHHHHHHHhcCCC-------CCCcCHHH
Confidence            668999999999987754       34678899999988753211111    1111122222222       24678999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      +|++++.++.....  ...+.++++.+|...|
T Consensus       225 va~~~~~l~~~~~~--~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        225 LVGACVFLASDASS--FVNGHVLYVDGGITAS  254 (255)
T ss_pred             HHHHHHHHcCchhc--CccCcEEEECCCeecc
Confidence            99999999875322  1234588998876554

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.2e-21  Score=165.30  Aligned_cols=233  Identities=16%  Similarity=0.130  Sum_probs=163.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-CCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-PHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      +++++||||||+||++++++|+++|   ++|++++|+.++...+.+.+ +..+.++.+|+.|.+++..+++.    ++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAG---DRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999   88999999876655544433 23577889999999988766653    3469


Q ss_pred             CEEEECCCccCcccc-ccC---chhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPRVC-END---PDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~~~-~~~---~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||++|...+... ..+   ....+.+|+.+++ ++++++    .+.+.+++|++||...+...           ...
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~  146 (257)
T PRK07074         79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAY-LCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-----------GHP  146 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCeEEEEEcchhhcCCC-----------CCc
Confidence            999999997543211 112   2344678888885 666666    34555689999997543211           133


Q ss_pred             hHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...+.+++.+.       .++.++||+.++++........ . ..+..... ..       ...++|++++|++
T Consensus       147 ~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~-~-~~~~~~~~-~~-------~~~~~~~~~~d~a  216 (257)
T PRK07074        147 AYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAA-N-PQVFEELK-KW-------YPLQDFATPDDVA  216 (257)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhccccc-C-hHHHHHHH-hc-------CCCCCCCCHHHHH
Confidence            79999999998877653       4668899999988753211100 0 11111111 11       1235789999999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHH
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAE  262 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~  262 (320)
                      ++++.++.....  ...+..+++.++...+.+|+.+.+..
T Consensus       217 ~~~~~l~~~~~~--~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        217 NAVLFLASPAAR--AITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             HHHHHHcCchhc--CcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            999999965322  22356889999999999999988754

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.9e-22  Score=165.77  Aligned_cols=219  Identities=17%  Similarity=0.155  Sum_probs=149.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEe-cCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHHh----
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      .++|+||||+|+||++++++|+++|   ++|.+. .|+.++........   +..+.++.+|++|++++.++++.+    
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G---~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDG---ALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            4799999999999999999999999   777664 56654433332222   345778999999999988877653    


Q ss_pred             ------CCCCEEEECCCccCcccccc----CchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCccc
Q 020880           75 ------GQPDVVVNCAALSVPRVCEN----DPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        75 ------~~~d~Vih~a~~~~~~~~~~----~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                            .++|+|||+||.........    ..+..+++|+.+++ ++++.+.+.  ...++|++||..++.+.       
T Consensus        83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~v~~sS~~~~~~~-------  154 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPF-FLIQQTLPLLRAEGRVINISSAEVRLGF-------  154 (254)
T ss_pred             ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHhhcCCEEEEECCHHhcCCC-------
Confidence                  36899999999764422111    22556779999986 888877652  23489999999887532       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                         .+...|+.+|...|.+.+.+       +.++++++|+.+.++-.......    ..+.........       ...+
T Consensus       155 ---~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~----~~~~~~~~~~~~-------~~~~  220 (254)
T PRK12746        155 ---TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDD----PEIRNFATNSSV-------FGRI  220 (254)
T ss_pred             ---CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccC----hhHHHHHHhcCC-------cCCC
Confidence               23668999999999876553       34678899999987743211000    011111111111       1246


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ++++|+|+++..++.....  ...+.+|++.++
T Consensus       221 ~~~~dva~~~~~l~~~~~~--~~~g~~~~i~~~  251 (254)
T PRK12746        221 GQVEDIADAVAFLASSDSR--WVTGQIIDVSGG  251 (254)
T ss_pred             CCHHHHHHHHHHHcCcccC--CcCCCEEEeCCC
Confidence            7999999999988875421  123558999876

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=1.1e-21  Score=164.82  Aligned_cols=223  Identities=14%  Similarity=0.121  Sum_probs=153.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC--CCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      .+++||||||||+||++++++|+++|   ++|++++|++++...+....  +..+.++.+|+.|++++..+++.    ++
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEG---ARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFG   80 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            35899999999999999999999999   88999999976655544433  24577899999999998877653    35


Q ss_pred             CCCEEEECCCccCcc-----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|+|||+||.....     .+..+++..+++|+.+++ .+++.+.    +.+.++||++||...+.+.          .
T Consensus        81 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~  149 (251)
T PRK07231         81 SVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPY-LWTQAAVPAMRGEGGGAIVNVASTAGLRPR----------P  149 (251)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHhcCCcEEEEEcChhhcCCC----------C
Confidence            789999999874321     122345678899998874 5555444    4566799999999877543          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+++.+       +.++..++|+.+..+......... ....... .....       ....+++++
T Consensus       150 ~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~-~~~~~~~-~~~~~-------~~~~~~~~~  220 (251)
T PRK07231        150 GLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEP-TPENRAK-FLATI-------PLGRLGTPE  220 (251)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhccc-ChHHHHH-HhcCC-------CCCCCcCHH
Confidence            3668999999999877654       335788999999665321110000 0011111 11111       123578999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+|++++.++.....  ...+..+.+.++.
T Consensus       221 dva~~~~~l~~~~~~--~~~g~~~~~~gg~  248 (251)
T PRK07231        221 DIANAALFLASDEAS--WITGVTLVVDGGR  248 (251)
T ss_pred             HHHHHHHHHhCcccc--CCCCCeEEECCCc
Confidence            999999999976432  1224577887654

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.4e-21  Score=163.88  Aligned_cols=224  Identities=17%  Similarity=0.114  Sum_probs=148.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhh---hCCCcceEEEeeCCCcccHHHHHHHh---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLD---ALPHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      +.++++||||+|+||++++++|+++|   ++|++..|+.+. ...+..   ..+..+.++.+|++|++++..+++.+   
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G---~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAG---AHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE   81 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCC---CEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            35899999999999999999999999   889888887543 222211   12345678899999999887776533   


Q ss_pred             -CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCCcchH
Q 020880           75 -GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVY  151 (320)
Q Consensus        75 -~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y  151 (320)
                       +++|+|||+|+....  ...++...+++|+.+++ ++++++.+.  ...++|++||........   .+..  ....+|
T Consensus        82 ~~~~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~-~l~~~~~~~~~~~~~iv~isS~~~~~~~~---~~~~--~~~~~Y  153 (248)
T PRK07806         82 FGGLDALVLNASGGME--SGMDEDYAMRLNRDAQR-NLARAALPLMPAGSRVVFVTSHQAHFIPT---VKTM--PEYEPV  153 (248)
T ss_pred             CCCCcEEEECCCCCCC--CCCCcceeeEeeeHHHH-HHHHHHHhhccCCceEEEEeCchhhcCcc---ccCC--ccccHH
Confidence             479999999986422  23356778899999996 898888753  224899999964421110   0111  125689


Q ss_pred             HHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHH
Q 020880          152 GKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI  224 (320)
Q Consensus       152 ~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  224 (320)
                      +.+|..+|.+++.+.       .++.+++|+.+-++-.......... ..+.    . ...     ....+++++|+|++
T Consensus       154 ~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~-~~~~----~-~~~-----~~~~~~~~~dva~~  222 (248)
T PRK07806        154 ARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNP-GAIE----A-RRE-----AAGKLYTVSEFAAE  222 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCH-HHHH----H-HHh-----hhcccCCHHHHHHH
Confidence            999999999888753       3455666665544321100000000 0000    0 000     12358999999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCCCc
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      ++.+++.....    +.+|++++++.+
T Consensus       223 ~~~l~~~~~~~----g~~~~i~~~~~~  245 (248)
T PRK07806        223 VARAVTAPVPS----GHIEYVGGADYF  245 (248)
T ss_pred             HHHHhhccccC----ccEEEecCccce
Confidence            99999864333    459999987643

>PRK09186 flagellin modification protein A; Provisional

Probab=99.89  E-value=8.7e-22  Score=166.02  Aligned_cols=225  Identities=17%  Similarity=0.167  Sum_probs=150.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHHh--
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALKF--   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~--   74 (320)
                      .+|+|+||||+|+||+++++.|+++|   ++|+++.|++++.......+     ...+.++.+|++|++++.++++..  
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g---~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAG---GIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAE   79 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999   88999999876655443322     124556799999999988777643  


Q ss_pred             --CCCCEEEECCCccCc-------cccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCccc
Q 020880           75 --GQPDVVVNCAALSVP-------RVCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        75 --~~~d~Vih~a~~~~~-------~~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                        +.+|+|||+|+....       ..+.......+++|+.+++   ..+++.+++.+.+++|++||.+.+.....+..+.
T Consensus        80 ~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~  159 (256)
T PRK09186         80 KYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEG  159 (256)
T ss_pred             HcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccc
Confidence              458999999975321       1111234566788888874   2344444556667999999977654332223344


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                      .+..+...|+.+|...+.+.+.+       +.++.+++|+.++++..     .    .+. .......+       ...+
T Consensus       160 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-----~----~~~-~~~~~~~~-------~~~~  222 (256)
T PRK09186        160 TSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-----E----AFL-NAYKKCCN-------GKGM  222 (256)
T ss_pred             cccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-----H----HHH-HHHHhcCC-------ccCC
Confidence            44333457999999999887643       34577899998876431     0    111 11111111       1246


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ++++|+|++++.++.....  ...+..+.+.+|
T Consensus       223 ~~~~dva~~~~~l~~~~~~--~~~g~~~~~~~g  253 (256)
T PRK09186        223 LDPDDICGTLVFLLSDQSK--YITGQNIIVDDG  253 (256)
T ss_pred             CCHHHhhhhHhheeccccc--cccCceEEecCC
Confidence            8999999999999976422  122447777665

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7.9e-22  Score=166.48  Aligned_cols=226  Identities=14%  Similarity=0.100  Sum_probs=154.4

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      |++|+||||||||+||++++++|+++|   ++|+++.|+++..+.+....   +.++.++.+|++|++++..+++.    
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAG---ADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER   79 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999   89999999876554443332   34578899999999988776654    


Q ss_pred             hCCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhhhhc---cCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 FGQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFTEN---KENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~~~---~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++++|+|||+||....     .....+++..+++|+.+++ .+++++...   ...++|++||...+.+.          
T Consensus        80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~ii~~sS~~~~~~~----------  148 (258)
T PRK07890         80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTL-RLTQAFTPALAESGGSIVMINSMVLRHSQ----------  148 (258)
T ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHH-HHHHHHHHHHHhCCCEEEEEechhhccCC----------
Confidence            3689999999987533     1223445677899999986 788877542   22489999998765422          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCC-----CCChHHHHHHHHhcCCceEeecCccc
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVP-----KSLPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                      .+...|+.+|...+.+++.+       +.++.++||+.++++.......     .......+........       ...
T Consensus       149 ~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~  221 (258)
T PRK07890        149 PKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANS-------DLK  221 (258)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcC-------Ccc
Confidence            24568999999999988765       3467889999999985321100     0000001111111111       122


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .+.+++|+|++++.++.....  ...+.++.+.++.
T Consensus       222 ~~~~~~dva~a~~~l~~~~~~--~~~G~~i~~~gg~  255 (258)
T PRK07890        222 RLPTDDEVASAVLFLASDLAR--AITGQTLDVNCGE  255 (258)
T ss_pred             ccCCHHHHHHHHHHHcCHhhh--CccCcEEEeCCcc
Confidence            468899999999998875321  1224466666553

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.3e-21  Score=163.09  Aligned_cols=211  Identities=17%  Similarity=0.136  Sum_probs=151.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-CCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-PHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      +|+||||||||+||++++++|+++|   ++|+++.|++.+........ .....++.+|+.|.+++.++++.    ++++
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAARG---ARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHCC---CeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence            4799999999999999999999999   89999999876544333222 23467788999999988777653    3579


Q ss_pred             CEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+++......    ...+....+..|+.++. ++++++.    +.+.+++|++||...++..          .+..
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~  152 (239)
T PRK12828         84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTL-NASKAALPALTASGGGRIVNIGAGAALKAG----------PGMG  152 (239)
T ss_pred             CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHH-HHHHHHHHHHHhcCCCEEEEECchHhccCC----------CCcc
Confidence            99999998754321    11233466789999885 7777664    4567799999999887643          2356


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...+.+++.+       +.++.++||+.++++......                     .......|++++|+|
T Consensus       153 ~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~---------------------~~~~~~~~~~~~dva  211 (239)
T PRK12828        153 AYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADM---------------------PDADFSRWVTPEQIA  211 (239)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcC---------------------CchhhhcCCCHHHHH
Confidence            8999999988877653       356788999999987421000                     001112379999999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +++.+++.+....  ..+..+++.+++.
T Consensus       212 ~~~~~~l~~~~~~--~~g~~~~~~g~~~  237 (239)
T PRK12828        212 AVIAFLLSDEAQA--ITGASIPVDGGVA  237 (239)
T ss_pred             HHHHHHhCccccc--ccceEEEecCCEe
Confidence            9999999864321  1255888887653

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.89  E-value=9.2e-22  Score=164.76  Aligned_cols=218  Identities=19%  Similarity=0.170  Sum_probs=154.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +++++||||+|+||+++++.|+++|   ++|+++.|+.++...+.+..  ...++.+|++|.+++.++++..+.+|+|||
T Consensus         9 ~~~~lItGa~g~iG~~~a~~l~~~g---~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~   83 (245)
T PRK07060          9 GKSVLVTGASSGIGRACAVALAQRG---ARVVAAARNAAALDRLAGET--GCEPLRLDVGDDAAIRAALAAAGAFDGLVN   83 (245)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHh--CCeEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence            4799999999999999999999999   88999999876555444432  356788999999988888887667999999


Q ss_pred             CCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc----c-CceEEEeechhhhcccCCCCcccCCCCCcchHHH
Q 020880           83 CAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN----K-ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGK  153 (320)
Q Consensus        83 ~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~----~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~  153 (320)
                      +||.....    ....+++..+++|+.+++ ++++++.+.    + .++||++||...+.+.          .+...|+.
T Consensus        84 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~y~~  152 (245)
T PRK07060         84 CAGIASLESALDMTAEGFDRVMAVNARGAA-LVARHVARAMIAAGRGGSIVNVSSQAALVGL----------PDHLAYCA  152 (245)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCCcEEEEEccHHHcCCC----------CCCcHhHH
Confidence            99975432    122345566789999986 777777542    2 3589999998776532          23568999


Q ss_pred             HHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHH
Q 020880          154 SKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL  226 (320)
Q Consensus       154 sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  226 (320)
                      +|..+|.+++.+       +.++..+||+.++++........  . ....... ...       ....+++++|+|++++
T Consensus       153 sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~--~-~~~~~~~-~~~-------~~~~~~~~~d~a~~~~  221 (245)
T PRK07060        153 SKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD--P-QKSGPML-AAI-------PLGRFAEVDDVAAPIL  221 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC--H-HHHHHHH-hcC-------CCCCCCCHHHHHHHHH
Confidence            999999977654       34678899999998753211111  0 0111111 111       1235899999999999


Q ss_pred             HHHhhhhccccccCceeEecCCC
Q 020880          227 ALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       227 ~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .++..+..  ...+.++++.+|.
T Consensus       222 ~l~~~~~~--~~~G~~~~~~~g~  242 (245)
T PRK07060        222 FLLSDAAS--MVSGVSLPVDGGY  242 (245)
T ss_pred             HHcCcccC--CccCcEEeECCCc
Confidence            99976432  2235688887653

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.88  E-value=1.1e-21  Score=164.85  Aligned_cols=224  Identities=16%  Similarity=0.123  Sum_probs=153.6

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHHh---
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      |.++++|||||+|+||++++++|+++|   ++|+++.|+.+....+...   .+.++.++.+|++|.+++.++++.+   
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   77 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEG---AKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA   77 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999   8899999987655443322   2346788999999999888776543   


Q ss_pred             -CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 -GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                       +++|+|||+|+......    +....+..+++|+.+++ ++++++.    +.+.+++|++||...+....         
T Consensus        78 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~---------  147 (250)
T TIGR03206        78 LGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGAL-HMHHAVLPGMVERGAGRIVNIASDAARVGSS---------  147 (250)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCeEEEEECchhhccCCC---------
Confidence             46899999998753211    11223566889999986 7766664    45667999999998876432         


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCC-CCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVP-KSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       ....|+.+|.+.+.+++.+       +.++.++||+.++++....... .......+.. +....+.       ..+..
T Consensus       148 -~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~  218 (250)
T TIGR03206       148 -GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREA-FTRAIPL-------GRLGQ  218 (250)
T ss_pred             -CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHH-HHhcCCc-------cCCcC
Confidence             2557999998888877654       4577899999998874211100 0011111111 1111111       12467


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      .+|+|+++..++.....  ...+.++++.++
T Consensus       219 ~~dva~~~~~l~~~~~~--~~~g~~~~~~~g  247 (250)
T TIGR03206       219 PDDLPGAILFFSSDDAS--FITGQVLSVSGG  247 (250)
T ss_pred             HHHHHHHHHHHcCcccC--CCcCcEEEeCCC
Confidence            89999999998876321  223558888765

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=3.2e-21  Score=162.59  Aligned_cols=221  Identities=19%  Similarity=0.193  Sum_probs=152.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhh---hCCCcceEEEeeCCCcccHHHHHHHh----
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLD---ALPHSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      +|++|||||+|+||+++++.|+++|   ++|+++.|+... .....+   ..+.++.++.+|++|++++.++++.+    
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g---~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAG---FDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW   78 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999   889988887432 222222   12346788999999999887766543    


Q ss_pred             CCCCEEEECCCccCcc------ccccCchhhhhccccccHHHHHhhhhhc-----c-----CceEEEeechhhhcccCCC
Q 020880           75 GQPDVVVNCAALSVPR------VCENDPDSAMSINVPSSLVNWLSSFTEN-----K-----ENLLIHLSTDQVYEGVKSF  138 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~~~l~~~~~~-----~-----~~~~v~~Ss~~vy~~~~~~  138 (320)
                      +.+|+|||+||...+.      .+..+++..+++|+.+++ ++++++...     +     ..++|++||...+.+.   
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---  154 (256)
T PRK12745         79 GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPF-FLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS---  154 (256)
T ss_pred             CCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHH-HHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC---
Confidence            5799999999875321      122345677899999986 777776431     1     4579999998765432   


Q ss_pred             CcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCc
Q 020880          139 YKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDE  211 (320)
Q Consensus       139 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (320)
                             .+.+.|+.+|...|.+++.+       +.+++++||+.+.++.....     ...+ ......+. .     .
T Consensus       155 -------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~-----~~~~-~~~~~~~~-~-----~  215 (256)
T PRK12745        155 -------PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV-----TAKY-DALIAKGL-V-----P  215 (256)
T ss_pred             -------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccccc-----chhH-HhhhhhcC-C-----C
Confidence                   23568999999999987765       34678999999988653211     1111 11111111 1     1


Q ss_pred             ccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          212 CRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       212 ~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      ...+.+.+|+++++..++.....  ...+.+|++.++..+
T Consensus       216 ~~~~~~~~d~a~~i~~l~~~~~~--~~~G~~~~i~gg~~~  253 (256)
T PRK12745        216 MPRWGEPEDVARAVAALASGDLP--YSTGQAIHVDGGLSI  253 (256)
T ss_pred             cCCCcCHHHHHHHHHHHhCCccc--ccCCCEEEECCCeec
Confidence            23578999999999988865322  123569999887543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.88  E-value=2.8e-21  Score=163.26  Aligned_cols=222  Identities=17%  Similarity=0.121  Sum_probs=148.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+|+++||||+|+||++++++|+++|   ++|+...|++. .....+.   .+..+.++.+|++|.+++.++++.    +
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G---~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEG---ARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999   88998888743 2222221   234567789999999887766654    3


Q ss_pred             CCCCEEEECCCccCc-----cccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|++||+||....     .....+.+..+++|+.+++   ..+++.+++.+..+||++||...++.            
T Consensus        83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------  150 (260)
T PRK12823         83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI------------  150 (260)
T ss_pred             CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC------------
Confidence            679999999985321     1122344566788988764   13445555566669999999887642            


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCC--------CCCCCChHHHHHHHHhcCCceEeecCc
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTIS--------PVPKSLPIQWIDSVLSKGEKVEFFHDE  211 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (320)
                      +..+|+.+|...+.+++.+       +.++.+++|+.+++|....        .........++.... .+.++.     
T Consensus       151 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----  224 (260)
T PRK12823        151 NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTL-DSSLMK-----  224 (260)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHh-ccCCcc-----
Confidence            2347999999999987764       3467889999999973110        000111112222221 233332     


Q ss_pred             ccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          212 CRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       212 ~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                        -+.+++|+|++++.++.....  ...+.++++.+|+
T Consensus       225 --~~~~~~dva~~~~~l~s~~~~--~~~g~~~~v~gg~  258 (260)
T PRK12823        225 --RYGTIDEQVAAILFLASDEAS--YITGTVLPVGGGD  258 (260)
T ss_pred             --cCCCHHHHHHHHHHHcCcccc--cccCcEEeecCCC
Confidence              256799999999998865321  1234588887764

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.4e-21  Score=162.55  Aligned_cols=216  Identities=17%  Similarity=0.164  Sum_probs=150.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC----Chhhhhh---hCCCcceEEEeeCCCcccHHHHHHH-
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP----LPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK-   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~----~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~-   73 (320)
                      ++|+++||||+|+||++++++|+++|   ++|+++.|...    ....+..   ..+..+.++.+|+.|++++..+++. 
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADG---ADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            45899999999999999999999999   78887665322    2222211   1234678899999999988877753 


Q ss_pred             ---hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh-----hccCceEEEeechhhhcccCCCCcc
Q 020880           74 ---FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT-----ENKENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        74 ---~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~-----~~~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                         .+++|+|||+||.....    ....++...+++|+.+++ ++++++.     +.+.+++|++||...+.+.      
T Consensus        82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  154 (249)
T PRK12827         82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFF-NVTQAALPPMIRARRGGRIVNIASVAGVRGN------  154 (249)
T ss_pred             HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHH-HHHHHHHHHHHhcCCCeEEEEECCchhcCCC------
Confidence               25799999999986531    222344667889999986 8888887     4566799999998776432      


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                          .+...|+.+|...+.+++.+       +.+++++||+.+.++.....    .....+.    +..+..       .
T Consensus       155 ----~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~----~~~~~~~----~~~~~~-------~  215 (249)
T PRK12827        155 ----RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNA----APTEHLL----NPVPVQ-------R  215 (249)
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccccc----chHHHHH----hhCCCc-------C
Confidence                23568999999988876654       45778999999998754211    1111111    111211       2


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +.+.+|+|++++.++.....  ...+..+++.++
T Consensus       216 ~~~~~~va~~~~~l~~~~~~--~~~g~~~~~~~g  247 (249)
T PRK12827        216 LGEPDEVAALVAFLVSDAAS--YVTGQVIPVDGG  247 (249)
T ss_pred             CcCHHHHHHHHHHHcCcccC--CccCcEEEeCCC
Confidence            45889999999988865321  223557888765

>PRK06128 oxidoreductase; Provisional

Probab=99.88  E-value=4.1e-21  Score=165.48  Aligned_cols=223  Identities=16%  Similarity=0.148  Sum_probs=154.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC--hhh---hhhhCCCcceEEEeeCCCcccHHHHHHH---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL--PQL---LLDALPHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~--~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      .+|++|||||+|+||+++++.|+++|   ++|++..++.+.  ...   .....+..+.++.+|++|++++.++++.   
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G---~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  130 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREG---ADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK  130 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcC---CEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            35899999999999999999999999   788877665432  122   2222344577889999999988777654   


Q ss_pred             -hCCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 -FGQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                       ++++|+|||+||....     +.+.++++..+++|+.+++ .+++++...  ...+||++||...|....         
T Consensus       131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~iv~~sS~~~~~~~~---------  200 (300)
T PRK06128        131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMF-WLCKAAIPHLPPGASIINTGSIQSYQPSP---------  200 (300)
T ss_pred             HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHhcCcCCEEEEECCccccCCCC---------
Confidence             3689999999997432     1233456788999999996 888887642  124899999998875432         


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                       ....|+.+|...+.+++.+       +.++.+++|+.+.++-....   ......+.. +....+       ...+.+.
T Consensus       201 -~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~---~~~~~~~~~-~~~~~p-------~~r~~~p  268 (300)
T PRK06128        201 -TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG---GQPPEKIPD-FGSETP-------MKRPGQP  268 (300)
T ss_pred             -CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC---CCCHHHHHH-HhcCCC-------CCCCcCH
Confidence             2457999999999988764       34678899999998753211   111112211 211222       2246789


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      +|+|.+++.++.....  -..+.+|++.+|..+
T Consensus       269 ~dva~~~~~l~s~~~~--~~~G~~~~v~gg~~~  299 (300)
T PRK06128        269 VEMAPLYVLLASQESS--YVTGEVFGVTGGLLL  299 (300)
T ss_pred             HHHHHHHHHHhCcccc--CccCcEEeeCCCEeC
Confidence            9999999998865321  123558999887654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=2.8e-21  Score=162.36  Aligned_cols=223  Identities=19%  Similarity=0.127  Sum_probs=151.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEE-ecCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHHh--
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAA-THHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALKF--   74 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~-~~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~--   74 (320)
                      |.+++++||||+|+||++++++|+++|   ++|+. ..|+.++.+...+   ..+..+.++.+|++|++++..+++.+  
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g---~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEG---YDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDE   78 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            556899999999999999999999999   77765 4666544433322   22456778999999999988777643  


Q ss_pred             --CCCCEEEECCCccCccccc----cCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCcccCC
Q 020880           75 --GQPDVVVNCAALSVPRVCE----NDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        75 --~~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                        +++|+|||+||........    ......+++|+.+++ ++++++.+    .+.++||++||...+..          
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------  147 (250)
T PRK08063         79 EFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALL-FCAQEAAKLMEKVGGGKIISLSSLGSIRY----------  147 (250)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCeEEEEEcchhhccC----------
Confidence              5799999999875432111    122346779998885 66666653    45569999999766532          


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      ..+...|+.+|...|.+++.+       +.++.+++|+.+..+........   ...... .....+       ...+++
T Consensus       148 ~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~---~~~~~~-~~~~~~-------~~~~~~  216 (250)
T PRK08063        148 LENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR---EELLED-ARAKTP-------AGRMVE  216 (250)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc---hHHHHH-HhcCCC-------CCCCcC
Confidence            224568999999999988764       34677899999976643211110   111111 111111       123689


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      .+|+|++++.++..+..  ...+..+++.++..
T Consensus       217 ~~dva~~~~~~~~~~~~--~~~g~~~~~~gg~~  247 (250)
T PRK08063        217 PEDVANAVLFLCSPEAD--MIRGQTIIVDGGRS  247 (250)
T ss_pred             HHHHHHHHHHHcCchhc--CccCCEEEECCCee
Confidence            99999999999876432  12355888887654

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.7e-21  Score=160.86  Aligned_cols=222  Identities=16%  Similarity=0.063  Sum_probs=149.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      ++++|+||||+|+||++++++|+++|   ++|++++|+.+.........+..+.++.+|++|.+++..+++.    ++++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEG---ARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            35799999999999999999999999   8999999986655555555555677889999998887665543    3578


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechh-hhcccCCCCcccCCCCCcch
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQ-VYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~-vy~~~~~~~~E~~~~~p~~~  150 (320)
                      |+|||+||.....    ....+++..+++|+.+++ ++++++...  ...++|++||.. .|+.           .+...
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~i~~~S~~~~~~~-----------~~~~~  149 (249)
T PRK06500         82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPY-FLIQALLPLLANPASIVLNGSINAHIGM-----------PNSSV  149 (249)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHhcCCEEEEEechHhccCC-----------CCccH
Confidence            9999999975432    123455678999999996 888888641  223677777754 4442           13568


Q ss_pred             HHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCC-CCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          151 YGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISP-VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      |+.+|...|.+++.+       +.++.++||+.++++..... ........+.. .+....++.       -+...+|+|
T Consensus       150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~va  221 (249)
T PRK06500        150 YAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAA-QIQALVPLG-------RFGTPEEIA  221 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHH-HHHhcCCCC-------CCcCHHHHH
Confidence            999999999988654       34678899999998742110 01111111222 222222222       246899999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +++.+++.....  .-.+..+.+.+|
T Consensus       222 ~~~~~l~~~~~~--~~~g~~i~~~gg  245 (249)
T PRK06500        222 KAVLYLASDESA--FIVGSEIIVDGG  245 (249)
T ss_pred             HHHHHHcCcccc--CccCCeEEECCC
Confidence            999998865321  112335555544

>PRK06194 hypothetical protein; Provisional

Probab=99.88  E-value=1.9e-21  Score=166.70  Aligned_cols=222  Identities=12%  Similarity=0.136  Sum_probs=146.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+++||||||+|+||++++++|+++|   ++|++++|+.+........+   +..+.++.+|++|.+++.++++.    +
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALG---MKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999999   88999999865544443322   23567799999999988877764    3


Q ss_pred             CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhh----hhhccC------ceEEEeechhhhcccCCCCc
Q 020880           75 GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSS----FTENKE------NLLIHLSTDQVYEGVKSFYK  140 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~------~~~v~~Ss~~vy~~~~~~~~  140 (320)
                      +++|+|||+||......    ...+++..+++|+.+++ +++++    +.+.+.      .++|++||...+.+.     
T Consensus        82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----  155 (287)
T PRK06194         82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVI-HGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP-----  155 (287)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHH-HHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-----
Confidence            56899999999865422    22345567889999986 65444    333332      489999998877532     


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHcC----CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec--CcccC
Q 020880          141 EEDEIAPVNVYGKSKVAAEKFIYEKCS----NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH--DECRC  214 (320)
Q Consensus       141 E~~~~~p~~~Y~~sK~~~e~~~~~~~~----~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  214 (320)
                           .+...|+.+|...|.+++.+..    ....+|...+ .|+.-   ..     .+.... .+.+..+.+  .+.++
T Consensus       156 -----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v-~pg~i---~t-----~~~~~~-~~~~~~~~~~~~~~~~  220 (287)
T PRK06194        156 -----PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVL-CPYFV---PT-----GIWQSE-RNRPADLANTAPPTRS  220 (287)
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEE-EeCcc---cC-----cccccc-ccCchhcccCccccch
Confidence                 2356899999999998876532    2233443333 22210   00     011111 233444443  35778


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYS  267 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~  267 (320)
                      |++++|++..+...       .             .++..|+++.+.+.+...
T Consensus       221 ~~~~~~~~~~~~~~-------~-------------~~s~~dva~~i~~~~~~~  253 (287)
T PRK06194        221 QLIAQAMSQKAVGS-------G-------------KVTAEEVAQLVFDAIRAG  253 (287)
T ss_pred             hhHHHHHHHhhhhc-------c-------------CCCHHHHHHHHHHHHHcC
Confidence            88888877654211       0             167888888888766533

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=3.4e-21  Score=161.99  Aligned_cols=221  Identities=13%  Similarity=0.075  Sum_probs=147.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhh---hhCCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLL---DALPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      +++||||||+|+||++++++|+++|   ++|+...|+... .....   ...+..+.++.+|+++++++..+++.    +
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEG---SLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY   82 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence            4899999999999999999999999   788776664322 22111   12233566788999999987776654    3


Q ss_pred             CCCCEEEECCCccCccccc----cCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           75 GQPDVVVNCAALSVPRVCE----NDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      +++|+|||+||...+....    ...+..+++|+.+.+ ++++++.+.  ...++|++||...+.+          ..+.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~~~  151 (252)
T PRK06077         83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVI-YCSQELAKEMREGGAIVNIASVAGIRP----------AYGL  151 (252)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHH-HHHHHHHHHhhcCcEEEEEcchhccCC----------CCCc
Confidence            5789999999974332111    122466889999885 777766643  2248999999988753          2346


Q ss_pred             chHHHHHHHHHHHHHHHc------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          149 NVYGKSKVAAEKFIYEKC------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~~------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      +.|+.+|...|.+++.+.      ..+.+++|+.+.++.......  ...........   .+    .....+++++|+|
T Consensus       152 ~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~--~~~~~~~~~~~---~~----~~~~~~~~~~dva  222 (252)
T PRK06077        152 SIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFK--VLGMSEKEFAE---KF----TLMGKILDPEEVA  222 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhh--cccccHHHHHH---hc----CcCCCCCCHHHHH
Confidence            799999999999887652      345678999887664311000  00000000010   01    1123689999999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ++++.++..+.    ..+++|++++|..
T Consensus       223 ~~~~~~~~~~~----~~g~~~~i~~g~~  246 (252)
T PRK06077        223 EFVAAILKIES----ITGQVFVLDSGES  246 (252)
T ss_pred             HHHHHHhCccc----cCCCeEEecCCee
Confidence            99999997532    2345899998753

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9e-21  Score=161.20  Aligned_cols=235  Identities=13%  Similarity=0.103  Sum_probs=156.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      |++|+++||||+|+||+++++.|+++|   ++|++..|+.+......+.+   +..+.++.+|++|++++.++++.    
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G---~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRG---ARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            346889999999999999999999999   88999998876555443322   23467789999999998877654    


Q ss_pred             hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hcc-CceEEEeechhhhcccCCCCcccCC
Q 020880           74 FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENK-ENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      ++++|+|||+||......    ...+.+..+++|+.+++ ++++++.    +.+ ..++|++||...+.+.         
T Consensus        81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~---------  150 (275)
T PRK05876         81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSI-HTVEAFLPRLLEQGTGGHVVFTASFAGLVPN---------  150 (275)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHhcCCCCEEEEeCChhhccCC---------
Confidence            357899999999754321    22334567899999986 7777663    333 3589999998876432         


Q ss_pred             CCCcchHHHHHHHHHHHHH----HH---cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec--CcccCc
Q 020880          145 IAPVNVYGKSKVAAEKFIY----EK---CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH--DECRCP  215 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~----~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  215 (320)
                       .+.+.|+.+|...+.+.+    ++   +.++.+++|+.+.++......      ................+  ...+++
T Consensus       151 -~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  223 (275)
T PRK05876        151 -AGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSE------RIRGAACAQSSTTGSPGPLPLQDDN  223 (275)
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchh------hhcCccccccccccccccccccccC
Confidence             346789999997555443    33   456788999998776421100      00000000011111122  235678


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRG  265 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~  265 (320)
                      ++++|+|++++.++.+    ++    .+.+.+  .....++.+...+...
T Consensus       224 ~~~~dva~~~~~ai~~----~~----~~~~~~--~~~~~~~~~~~~~~~~  263 (275)
T PRK05876        224 LGVDDIAQLTADAILA----NR----LYVLPH--AASRASIRRRFERIDR  263 (275)
T ss_pred             CCHHHHHHHHHHHHHc----CC----eEEecC--hhhHHHHHHHHHHHHH
Confidence            9999999999999987    22    455543  3455555555555433

>PRK05717 oxidoreductase; Validated

Probab=99.87  E-value=1.3e-20  Score=158.78  Aligned_cols=218  Identities=14%  Similarity=0.128  Sum_probs=150.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~d   78 (320)
                      +|+++||||+|+||+++++.|+++|   ++|+.+.|+.++........+..+.++.+|++|.+++.++++    .++.+|
T Consensus        10 ~k~vlItG~sg~IG~~~a~~l~~~g---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   86 (255)
T PRK05717         10 GRVALVTGAARGIGLGIAAWLIAEG---WQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLD   86 (255)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcC---CEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            6899999999999999999999999   889988887665555444445567889999999998766554    345799


Q ss_pred             EEEECCCccCcc------ccccCchhhhhccccccHHHHHhhhhh---ccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           79 VVVNCAALSVPR------VCENDPDSAMSINVPSSLVNWLSSFTE---NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        79 ~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      +|||+||...+.      ....+++..+++|+.+++ ++++++..   ....++|++||...+....          ..+
T Consensus        87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~----------~~~  155 (255)
T PRK05717         87 ALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPM-LLAKHCAPYLRAHNGAIVNLASTRARQSEP----------DTE  155 (255)
T ss_pred             EEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCcEEEEEcchhhcCCCC----------CCc
Confidence            999999976432      122345678999999996 88888853   2224899999987654321          245


Q ss_pred             hHHHHHHHHHHHHHHH----c--CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHH
Q 020880          150 VYGKSKVAAEKFIYEK----C--SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK  223 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~----~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  223 (320)
                      .|+.+|...+.+++.+    +  .++.+++|+.+.++.....   . ... +........+       ...+.+.+|+|.
T Consensus       156 ~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~---~-~~~-~~~~~~~~~~-------~~~~~~~~~va~  223 (255)
T PRK05717        156 AYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQR---R-AEP-LSEADHAQHP-------AGRVGTVEDVAA  223 (255)
T ss_pred             chHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccc---c-chH-HHHHHhhcCC-------CCCCcCHHHHHH
Confidence            7999999999877754    2  3557799999988743211   0 001 1110100111       123678999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCC
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ++..++.....  ...+..+.+.++
T Consensus       224 ~~~~l~~~~~~--~~~g~~~~~~gg  246 (255)
T PRK05717        224 MVAWLLSRQAG--FVTGQEFVVDGG  246 (255)
T ss_pred             HHHHHcCchhc--CccCcEEEECCC
Confidence            99988865321  122446777654

>PRK06182 short chain dehydrogenase; Validated

Probab=99.87  E-value=7.4e-21  Score=161.85  Aligned_cols=219  Identities=15%  Similarity=0.070  Sum_probs=149.3

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQ   76 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~   76 (320)
                      |.+|+++||||+|+||++++++|+++|   ++|+++.|+.++...+..   .++.++.+|++|++++.++++.    +++
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~~l~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~   74 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQG---YTVYGAARRVDKMEDLAS---LGVHPLSLDVTDEASIKAAVDTIIAEEGR   74 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHh---CCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            678999999999999999999999999   899999998765543322   3477899999999998777753    358


Q ss_pred             CCEEEECCCccCccc----cccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           77 PDVVVNCAALSVPRV----CENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      +|+|||+||......    ...+++..+++|+.+++   ..+++.+++.+..++|++||...+...          ....
T Consensus        75 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~----------~~~~  144 (273)
T PRK06182         75 IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT----------PLGA  144 (273)
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC----------CCcc
Confidence            999999999764321    23345778899998853   255556667776799999997643221          1234


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCC-------CCChHHH---HHHHHhcCCceEeecCcc
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVP-------KSLPIQW---IDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~-------~~~~~~~---~~~~~~~~~~~~~~~~~~  212 (320)
                      .|+.+|...+.+.+.+       +.++.++||+.+..+.......       .......   +...+....       ..
T Consensus       145 ~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~  217 (273)
T PRK06182        145 WYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTY-------GS  217 (273)
T ss_pred             HhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhh-------cc
Confidence            7999999999876543       4578899999998764310000       0000000   000110000       12


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG  247 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~  247 (320)
                      ..+.+.+|+|++++.++.....     ...|+++.
T Consensus       218 ~~~~~~~~vA~~i~~~~~~~~~-----~~~~~~g~  247 (273)
T PRK06182        218 GRLSDPSVIADAISKAVTARRP-----KTRYAVGF  247 (273)
T ss_pred             ccCCCHHHHHHHHHHHHhCCCC-----CceeecCc
Confidence            3467999999999999886322     12566654

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.87  E-value=9e-21  Score=160.12  Aligned_cols=227  Identities=18%  Similarity=0.195  Sum_probs=151.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----C-CcceEEEeeCCCcccHHHHHHH----
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----P-HSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      +++||||||+|+||+++++.|+++|   ++|++++|+........+..    + ..+.++.+|++|.+++..+++.    
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g---~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   78 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEG---YRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI   78 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999   89999999866554433321    1 3577899999999988776654    


Q ss_pred             hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hcc-CceEEEeechhh-hcccCCCCcccC
Q 020880           74 FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENK-ENLLIHLSTDQV-YEGVKSFYKEED  143 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~-~~~~v~~Ss~~v-y~~~~~~~~E~~  143 (320)
                      ++++|+|||+||......    ...+++..+++|+.+++ .+++++.    +.+ ..++|++||... ++.         
T Consensus        79 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~---------  148 (259)
T PRK12384         79 FGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYF-LCAREFSRLMIRDGIQGRIIQINSKSGKVGS---------  148 (259)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHH-HHHHHHHHHHHhCCCCcEEEEecCcccccCC---------
Confidence            357999999998764321    12234566789999975 5555553    344 348999998653 331         


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHH-hcCCceEee--cCccc
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVL-SKGEKVEFF--HDECR  213 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~  213 (320)
                        .....|+.+|...+.+++.+       +.++.++||+.++++....    .++..+..... ..+......  +...+
T Consensus       149 --~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (259)
T PRK12384        149 --KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ----SLLPQYAKKLGIKPDEVEQYYIDKVPLK  222 (259)
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh----hhhHHHHHhcCCChHHHHHHHHHhCccc
Confidence              13468999999988876654       3567889999988764321    11111110000 000000001  11345


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      .+++.+|++++++.++.+...  ...+.+|++++|+.
T Consensus       223 ~~~~~~dv~~~~~~l~~~~~~--~~~G~~~~v~~g~~  257 (259)
T PRK12384        223 RGCDYQDVLNMLLFYASPKAS--YCTGQSINVTGGQV  257 (259)
T ss_pred             CCCCHHHHHHHHHHHcCcccc--cccCceEEEcCCEE
Confidence            689999999999988865321  12356899988754

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.87  E-value=7.3e-21  Score=159.53  Aligned_cols=218  Identities=17%  Similarity=0.165  Sum_probs=149.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC-CCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~-~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      .+++++||||+|+||++++++|+++|   ++|++..++ ++..+...+.   .+.++.++.+|++|++++.++++.    
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g---~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEG---AKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999999   777765554 3333333222   234578899999999998877764    


Q ss_pred             hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++.+|+|||+||......    ....++..+++|+.+++ .+++++..    .+..++|++||...+.+.          
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------  150 (247)
T PRK12935         82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVF-NTTSAVLPYITEAEEGRIISISSIIGQAGG----------  150 (247)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCcEEEEEcchhhcCCC----------
Confidence            356899999999864321    12355677899999986 77777753    344589999997654321          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+++.+       +.++++++|+.+.++...     ........... .+       ...+.+.++
T Consensus       151 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~-----~~~~~~~~~~~-~~-------~~~~~~~~~  217 (247)
T PRK12935        151 FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVA-----EVPEEVRQKIV-AK-------IPKKRFGQA  217 (247)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhh-----hccHHHHHHHH-Hh-------CCCCCCcCH
Confidence            24668999999988876553       456788999998765321     11111111111 11       123468999


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|++++++.+++...   -..++.||++++.
T Consensus       218 edva~~~~~~~~~~~---~~~g~~~~i~~g~  245 (247)
T PRK12935        218 DEIAKGVVYLCRDGA---YITGQQLNINGGL  245 (247)
T ss_pred             HHHHHHHHHHcCccc---CccCCEEEeCCCc
Confidence            999999999986531   1235699998763

>PLN02253 xanthoxin dehydrogenase

Probab=99.86  E-value=1.8e-20  Score=160.16  Aligned_cols=232  Identities=18%  Similarity=0.196  Sum_probs=152.9

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC--CCcceEEEeeCCCcccHHHHHHH----h
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      |.+|+++||||+|+||++++++|+++|   ++|+++.|+.+....+.+.+  ..++.++.+|++|++++.++++.    +
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~G---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   92 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKHG---AKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF   92 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence            346899999999999999999999999   88999988765544444333  23577899999999988776653    3


Q ss_pred             CCCCEEEECCCccCcc------ccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhh-hcccCCCCcccC
Q 020880           75 GQPDVVVNCAALSVPR------VCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQV-YEGVKSFYKEED  143 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~v-y~~~~~~~~E~~  143 (320)
                      +++|+|||+||.....      .+..+++..+++|+.+++ ++++++..    .+..++|++||... ++.         
T Consensus        93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~g~ii~isS~~~~~~~---------  162 (280)
T PLN02253         93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVF-LGMKHAARIMIPLKKGSIVSLCSVASAIGG---------  162 (280)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHH-HHHHHHHHHHHhcCCceEEEecChhhcccC---------
Confidence            5799999999975321      122345788999999986 77776653    23347899988664 321         


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCC-ChHHHHH---HHHhcCCceEeecCcc
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKS-LPIQWID---SVLSKGEKVEFFHDEC  212 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~  212 (320)
                        .....|+.+|...|.+.+.+.       .++.+++|+.+..+......+.. .....+.   .....+.++      .
T Consensus       163 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~  234 (280)
T PLN02253        163 --LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANL------K  234 (280)
T ss_pred             --CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCC------c
Confidence              123479999999999887653       35577999998765321111110 0001111   111111111      1


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHH
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ  255 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e  255 (320)
                      ...++.+|+|+++++++.....  ...+..+++.+|...+..+
T Consensus       235 ~~~~~~~dva~~~~~l~s~~~~--~i~G~~i~vdgG~~~~~~~  275 (280)
T PLN02253        235 GVELTVDDVANAVLFLASDEAR--YISGLNLMIDGGFTCTNHS  275 (280)
T ss_pred             CCCCCHHHHHHHHHhhcCcccc--cccCcEEEECCchhhccch
Confidence            2247899999999999865321  1234588888875544433

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.86  E-value=3e-20  Score=155.92  Aligned_cols=221  Identities=20%  Similarity=0.178  Sum_probs=150.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----C
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----G   75 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~   75 (320)
                      |++|+||||||+|+||++++++|+++|   ++|+++.|+... ........+..+.++.+|+++++++..+++..    +
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAG---ADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            346899999999999999999999999   889999987521 22222333456788999999999988766543    5


Q ss_pred             CCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhh----cc-CceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTE----NK-ENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~----~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|+|||+||......    ...+++..+++|+.+.+ ++++++..    .+ ..++|++||...+.+..          
T Consensus        80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------  148 (248)
T TIGR01832        80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVF-FLTQAAAKHFLKQGRGGKIINIASMLSFQGGI----------  148 (248)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHhcCCCeEEEEEecHHhccCCC----------
Confidence            7999999999864321    22345667889999885 77776642    33 35899999998876432          


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      ....|+.+|...+.+++.+       +.++.+++|+.+..+........   ........ ...       ....++..+
T Consensus       149 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~-~~~-------~~~~~~~~~  217 (248)
T TIGR01832       149 RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD---EDRNAAIL-ERI-------PAGRWGTPD  217 (248)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC---hHHHHHHH-hcC-------CCCCCcCHH
Confidence            2447999999999977765       34668899999976642111000   00111111 111       123579999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      |+|++++.++......  ..+.++.+.+|
T Consensus       218 dva~~~~~l~s~~~~~--~~G~~i~~dgg  244 (248)
T TIGR01832       218 DIGGPAVFLASSASDY--VNGYTLAVDGG  244 (248)
T ss_pred             HHHHHHHHHcCccccC--cCCcEEEeCCC
Confidence            9999999998753221  12446666554

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.86  E-value=3.3e-21  Score=160.06  Aligned_cols=225  Identities=17%  Similarity=0.193  Sum_probs=158.3

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh-hhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEECC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-LLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCA   84 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a   84 (320)
                      |+|+||||.+|+++++.|++.+   ++|.+++|+.++.. ..+..  .+++++.+|+.|++++.++++   ++|+||.+.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~---~~V~~l~R~~~~~~~~~l~~--~g~~vv~~d~~~~~~l~~al~---g~d~v~~~~   72 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAG---FSVRALVRDPSSDRAQQLQA--LGAEVVEADYDDPESLVAALK---GVDAVFSVT   72 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT---GCEEEEESSSHHHHHHHHHH--TTTEEEES-TT-HHHHHHHHT---TCSEEEEES
T ss_pred             CEEECCccHHHHHHHHHHHhCC---CCcEEEEeccchhhhhhhhc--ccceEeecccCCHHHHHHHHc---CCceEEeec
Confidence            7999999999999999999988   89999999974321 11222  356788999999999998888   999999887


Q ss_pred             CccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHH
Q 020880           85 ALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE  164 (320)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~  164 (320)
                      +.....      +.      ... .+++++|++.|+++||+.|....+.       +.....|..++-..|...|+++++
T Consensus        73 ~~~~~~------~~------~~~-~~li~Aa~~agVk~~v~ss~~~~~~-------~~~~~~p~~~~~~~k~~ie~~l~~  132 (233)
T PF05368_consen   73 PPSHPS------EL------EQQ-KNLIDAAKAAGVKHFVPSSFGADYD-------ESSGSEPEIPHFDQKAEIEEYLRE  132 (233)
T ss_dssp             SCSCCC------HH------HHH-HHHHHHHHHHT-SEEEESEESSGTT-------TTTTSTTHHHHHHHHHHHHHHHHH
T ss_pred             Ccchhh------hh------hhh-hhHHHhhhccccceEEEEEeccccc-------ccccccccchhhhhhhhhhhhhhh
Confidence            754311      11      111 4899999999999999766555542       111223444566789999999999


Q ss_pred             HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcC-CceEeecC--cccCce-eHHHHHHHHHHHHhhhhccccccC
Q 020880          165 KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKG-EKVEFFHD--ECRCPV-YVRDVVKIILALTNRWLSEDKQMQ  240 (320)
Q Consensus       165 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~i-~v~D~a~~~~~~~~~~~~~~~~~~  240 (320)
                      .+.+++++|++..+..-....       ... ...... ..+.+.++  ....++ +.+|+++++..++.++...+  .+
T Consensus       133 ~~i~~t~i~~g~f~e~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~--~~  202 (233)
T PF05368_consen  133 SGIPYTIIRPGFFMENLLPPF-------APV-VDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHN--NG  202 (233)
T ss_dssp             CTSEBEEEEE-EEHHHHHTTT-------HHT-TCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTT--EE
T ss_pred             ccccceeccccchhhhhhhhh-------ccc-ccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhc--CC
Confidence            999999999998875432100       000 001112 23555554  345664 99999999999999864431  24


Q ss_pred             ceeEecCCCCcCHHHHHHHHHHHhCCCCC
Q 020880          241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTS  269 (320)
Q Consensus       241 ~~~n~~~~~~~s~~e~~~~i~~~~~~~~~  269 (320)
                      ..+.+++ +.+|+.|+++.+.+.+|++..
T Consensus       203 ~~~~~~~-~~~t~~eia~~~s~~~G~~v~  230 (233)
T PF05368_consen  203 KTIFLAG-ETLTYNEIAAILSKVLGKKVK  230 (233)
T ss_dssp             EEEEEGG-GEEEHHHHHHHHHHHHTSEEE
T ss_pred             EEEEeCC-CCCCHHHHHHHHHHHHCCccE
Confidence            5788866 789999999999999998743

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2e-20  Score=157.14  Aligned_cols=219  Identities=21%  Similarity=0.149  Sum_probs=152.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHHh----C
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALKF----G   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~----~   75 (320)
                      +|+++||||+|.||++++++|+++|   ++|+++.|++++.....+.+   ...+.++.+|++|++++.++++..    +
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAG---ATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALG   83 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999   88998888866554433322   345788999999999988777543    5


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++|+|||+||.....    ....+.+..++.|+.+++ ++++++.+    .+..++|++||...+.+..          +
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~  152 (250)
T PRK12939         84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTF-LMLRAALPHLRDSGRGRIVNLASDTALWGAP----------K  152 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCeEEEEECchhhccCCC----------C
Confidence            799999999975432    122334566789999985 77777643    2334999999987654322          2


Q ss_pred             cchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...|.+++.+.       .++.+++|+.+..+..... ..   ..+... .....       ....+++++|
T Consensus       153 ~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-~~---~~~~~~-~~~~~-------~~~~~~~~~d  220 (250)
T PRK12939        153 LGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYV-PA---DERHAY-YLKGR-------ALERLQVPDD  220 (250)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCcccccc-CC---hHHHHH-HHhcC-------CCCCCCCHHH
Confidence            4579999999999887642       3567799998866543111 10   011111 11111       2335789999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|++++.++.....  ...+..+++.++.
T Consensus       221 va~~~~~l~~~~~~--~~~G~~i~~~gg~  247 (250)
T PRK12939        221 VAGAVLFLLSDAAR--FVTGQLLPVNGGF  247 (250)
T ss_pred             HHHHHHHHhCcccc--CccCcEEEECCCc
Confidence            99999999976422  1235688887763

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.86  E-value=2.3e-20  Score=146.11  Aligned_cols=295  Identities=17%  Similarity=0.138  Sum_probs=209.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .+|||||+-|.+|..+++.|..+ |-  -.|++.+-.+.+.. ..    ..-.++..|+.|-..++++.-. .++|.+||
T Consensus        45 PrvLITG~LGQLG~~~A~LLR~~yGs--~~VILSDI~KPp~~-V~----~~GPyIy~DILD~K~L~eIVVn-~RIdWL~H  116 (366)
T KOG2774|consen   45 PRVLITGSLGQLGRGLASLLRYMYGS--ECVILSDIVKPPAN-VT----DVGPYIYLDILDQKSLEEIVVN-KRIDWLVH  116 (366)
T ss_pred             CeEEEecchHHHhHHHHHHHHHHhCC--ccEehhhccCCchh-hc----ccCCchhhhhhccccHHHhhcc-cccceeee
Confidence            58999999999999999988765 52  34554433332221 11    2234578899999888887644 38999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC--CCcccCCCCCcchHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS--FYKEEDEIAPVNVYGKSKVAAEK  160 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~--~~~E~~~~~p~~~Y~~sK~~~e~  160 (320)
                      ..+..+. ..+.+...+.++|+.|. .|+++.+++++. ++...|++..||+...  |-..-+...|.+.||.||..+|.
T Consensus       117 fSALLSA-vGE~NVpLA~~VNI~Gv-HNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL  193 (366)
T KOG2774|consen  117 FSALLSA-VGETNVPLALQVNIRGV-HNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAEL  193 (366)
T ss_pred             HHHHHHH-hcccCCceeeeecchhh-hHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHH
Confidence            8876542 23567788899999998 599999999998 7888999999997654  44444557799999999999998


Q ss_pred             HHHH----HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCc-eEeecCcccCceeHHHHHHHHHHHHhhhhcc
Q 020880          161 FIYE----KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEK-VEFFHDECRCPVYVRDVVKIILALTNRWLSE  235 (320)
Q Consensus       161 ~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  235 (320)
                      +-+.    ++.++-.+|++.++.....+..........+..+..+|+. -.+.++....+.|.+|+.++++.++..+.  
T Consensus       194 ~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~--  271 (366)
T KOG2774|consen  194 LGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADS--  271 (366)
T ss_pred             HHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCH--
Confidence            6654    4667888999988876544433344444455666666664 34445677788999999999999988754  


Q ss_pred             ccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHH
Q 020880          236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLT  314 (320)
Q Consensus       236 ~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~  314 (320)
                      .+-.+++||+.+ -.+|..|+++.+.+.+..-..-....    ......+.+...+|.+.++++..|+- +.+...+.-+
T Consensus       272 ~~lkrr~ynvt~-~sftpee~~~~~~~~~p~~~i~y~~~----srq~iad~wp~~~dds~ar~~wh~~h~~~l~~~i~~~  346 (366)
T KOG2774|consen  272 QSLKRRTYNVTG-FSFTPEEIADAIRRVMPGFEIDYDIC----TRQSIADSWPMSLDDSEARTEWHEKHSLHLLSIISTV  346 (366)
T ss_pred             HHhhhheeeece-eccCHHHHHHHHHhhCCCceeecccc----hhhhhhhhcccccCchhHhhHHHHhhhhhHHHHHHHH
Confidence            234577999965 78999999999998764321111011    01111234567899999999999987 6766655544


Q ss_pred             Hh
Q 020880          315 LA  316 (320)
Q Consensus       315 i~  316 (320)
                      +.
T Consensus       347 i~  348 (366)
T KOG2774|consen  347 VA  348 (366)
T ss_pred             HH
Confidence            43

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.2e-20  Score=158.06  Aligned_cols=203  Identities=14%  Similarity=0.148  Sum_probs=144.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      +++||||||+|+||+++++.|+++|   ++|++++|+....+...+.   .+..+.++.+|++|.+++.++++.    ++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g---~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   77 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAG---AQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFG   77 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999   8999999986554433322   244677889999999988777664    35


Q ss_pred             CCCEEEECCCccCccccc-----cCchhhhhccccccHHHHHhhhhh---ccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPRVCE-----NDPDSAMSINVPSSLVNWLSSFTE---NKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~-----~~~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++|+|||+||........     +.....+++|+.+++ ++++.+..   .+..++|++||...+.+.          .+
T Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~  146 (263)
T PRK06181         78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAV-YCTHAALPHLKASRGQIVVVSSLAGLTGV----------PT  146 (263)
T ss_pred             CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCEEEEEecccccCCC----------CC
Confidence            789999999976443211     123566899999996 88887742   234589999998876532          23


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...|.+.+.+       +.++.+++|+.+..+.....         +.   ..+.+....+.+...+++++|
T Consensus       147 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~---------~~---~~~~~~~~~~~~~~~~~~~~d  214 (263)
T PRK06181        147 RSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA---------LD---GDGKPLGKSPMQESKIMSAEE  214 (263)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh---------cc---ccccccccccccccCCCCHHH
Confidence            568999999999887653       34678899998876532110         00   011111111222346899999


Q ss_pred             HHHHHHHHHhh
Q 020880          221 VVKIILALTNR  231 (320)
Q Consensus       221 ~a~~~~~~~~~  231 (320)
                      +|++++.+++.
T Consensus       215 va~~i~~~~~~  225 (263)
T PRK06181        215 CAEAILPAIAR  225 (263)
T ss_pred             HHHHHHHHhhC
Confidence            99999999975

>PRK08264 short chain dehydrogenase; Validated

Probab=99.86  E-value=3.4e-20  Score=154.57  Aligned_cols=160  Identities=18%  Similarity=0.143  Sum_probs=124.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      +++|+||||||+||++++++|+++|   + .|+.+.|+.++...    .+.++.++.+|+.|.+++.++++.++.+|+||
T Consensus         6 ~~~vlItGgsg~iG~~la~~l~~~G---~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   78 (238)
T PRK08264          6 GKVVLVTGANRGIGRAFVEQLLARG---AAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILV   78 (238)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---cccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            4699999999999999999999999   6 89999998665433    34567889999999999999888776789999


Q ss_pred             ECCCccC-c----cccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcchHH
Q 020880           82 NCAALSV-P----RVCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYG  152 (320)
Q Consensus        82 h~a~~~~-~----~~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~  152 (320)
                      |+||... .    .....++...+++|+.+++ ++++++.    +.+..++|++||...+.+.          .+...|+
T Consensus        79 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~----------~~~~~y~  147 (238)
T PRK08264         79 NNAGIFRTGSLLLEGDEDALRAEMETNYFGPL-AMARAFAPVLAANGGGAIVNVLSVLSWVNF----------PNLGTYS  147 (238)
T ss_pred             ECCCcCCCCCccccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCEEEEEcChhhccCC----------CCchHhH
Confidence            9999732 2    1122344567889999885 7777754    3456689999998876532          2356899


Q ss_pred             HHHHHHHHHHHHH-------cCCeeEEeecccccC
Q 020880          153 KSKVAAEKFIYEK-------CSNFAILRSSIIYGP  180 (320)
Q Consensus       153 ~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~  180 (320)
                      .+|...|.+.+.+       +.++.++||+.+.++
T Consensus       148 ~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~  182 (238)
T PRK08264        148 ASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTD  182 (238)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccc
Confidence            9999999877654       346788999988665

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1e-20  Score=156.50  Aligned_cols=208  Identities=13%  Similarity=0.116  Sum_probs=140.1

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |+||++|||||+|+||+++++.|+++ +   +|+++.|+.+....+.... ..++++.+|++|++++.++++.++++|+|
T Consensus         1 ~~~~~vlVtG~~g~iG~~l~~~l~~~-~---~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~id~v   75 (227)
T PRK08219          1 MERPTALITGASRGIGAAIARELAPT-H---TLLLGGRPAERLDELAAEL-PGATPFPVDLTDPEAIAAAVEQLGRLDVL   75 (227)
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHhh-C---CEEEEeCCHHHHHHHHHHh-ccceEEecCCCCHHHHHHHHHhcCCCCEE
Confidence            66789999999999999999999987 4   6888889865544443322 35778999999999999888866679999


Q ss_pred             EECCCccCcccc----ccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHH
Q 020880           81 VNCAALSVPRVC----ENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGK  153 (320)
Q Consensus        81 ih~a~~~~~~~~----~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~  153 (320)
                      ||++|.......    ..+....++.|+.+.+   .++++.+++.+ +++|++||...++...          +...|+.
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~~----------~~~~y~~  144 (227)
T PRK08219         76 VHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRANP----------GWGSYAA  144 (227)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcCC----------CCchHHH
Confidence            999997543211    1223455778887753   24445444444 4899999988765332          3568999


Q ss_pred             HHHHHHHHHHHHc------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHH
Q 020880          154 SKVAAEKFIYEKC------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA  227 (320)
Q Consensus       154 sK~~~e~~~~~~~------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  227 (320)
                      +|...+.+++.+.      .++..++|+.+.++...         ....   ..+...     ....+++++|+|++++.
T Consensus       145 ~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~---------~~~~---~~~~~~-----~~~~~~~~~dva~~~~~  207 (227)
T PRK08219        145 SKFALRALADALREEEPGNVRVTSVHPGRTDTDMQR---------GLVA---QEGGEY-----DPERYLRPETVAKAVRF  207 (227)
T ss_pred             HHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhh---------hhhh---hhcccc-----CCCCCCCHHHHHHHHHH
Confidence            9999998777642      34455666554332110         0110   011111     12457999999999999


Q ss_pred             HHhhhhccccccCceeEec
Q 020880          228 LTNRWLSEDKQMQLLLNVG  246 (320)
Q Consensus       228 ~~~~~~~~~~~~~~~~n~~  246 (320)
                      +++++..     +.++++.
T Consensus       208 ~l~~~~~-----~~~~~~~  221 (227)
T PRK08219        208 AVDAPPD-----AHITEVV  221 (227)
T ss_pred             HHcCCCC-----CccceEE
Confidence            9987432     2366664

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3.3e-20  Score=157.63  Aligned_cols=206  Identities=16%  Similarity=0.159  Sum_probs=143.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~d   78 (320)
                      +++|+||||||+||++++++|+++|   ++|++..|+.+....     ..+++++.+|++|++++.++++.    ++.+|
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g---~~V~~~~r~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d   75 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAG---YRVFGTSRNPARAAP-----IPGVELLELDVTDDASVQAAVDEVIARAGRID   75 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCChhhccc-----cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence            5789999999999999999999999   899999998654322     23577899999999998887764    35789


Q ss_pred             EEEECCCccCccc----cccCchhhhhccccccHHHHHhh----hhhccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           79 VVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSS----FTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        79 ~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      +|||+||......    ...+.+..+++|+.+++ +++++    +++.+.+++|++||...+.+..          ....
T Consensus        76 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~-~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~  144 (270)
T PRK06179         76 VLVNNAGVGLAGAAEESSIAQAQALFDTNVFGIL-RMTRAVLPHMRAQGSGRIINISSVLGFLPAP----------YMAL  144 (270)
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCceEEEECCccccCCCC----------CccH
Confidence            9999999864321    22345678899999875 66665    4566777999999987664321          2568


Q ss_pred             HHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCC-CChHHH--HHHHHhcCCceEeecCcccCceeHHH
Q 020880          151 YGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPK-SLPIQW--IDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      |+.+|...+.+.+.+       +.++++++|+.+.++........ ......  ........  .   ..........+|
T Consensus       145 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~  219 (270)
T PRK06179        145 YAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKA--V---AKAVKKADAPEV  219 (270)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHH--H---HhccccCCCHHH
Confidence            999999999877653       56789999999987643211110 000000  00000000  0   001112467899


Q ss_pred             HHHHHHHHHhhh
Q 020880          221 VVKIILALTNRW  232 (320)
Q Consensus       221 ~a~~~~~~~~~~  232 (320)
                      +|+.++.++..+
T Consensus       220 va~~~~~~~~~~  231 (270)
T PRK06179        220 VADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHHcCC
Confidence            999999998764

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5.9e-20  Score=155.04  Aligned_cols=223  Identities=15%  Similarity=0.105  Sum_probs=149.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHHh----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      .++++|||||+|.||++++++|+++|   ++|+++.|+++.. ...+.   .+..+.++.+|+++++++..+++.+    
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G---~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEG---AIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC---CcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            45799999999999999999999999   8889899987654 22222   2346788999999999887777643    


Q ss_pred             CCCCEEEECCCccCcc---ccccCchhhhhccccccHHHHHhhhhh---ccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           75 GQPDVVVNCAALSVPR---VCENDPDSAMSINVPSSLVNWLSSFTE---NKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      +.+|+|||+||.....   ....+.+..++.|+.+.+ ++.+.+.+   .+..+||++||...+.+.          .+.
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------~~~  150 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYY-VMAHYCLPHLKASRGAIVNISSKTALTGQ----------GGT  150 (258)
T ss_pred             CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHH-HHHHHHHHHhhccCcEEEEECCHHhccCC----------CCC
Confidence            5789999999964321   111345667889998875 66666542   233589999998765322          236


Q ss_pred             chHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCC-CChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          149 NVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPK-SLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ..|+.+|...|.+++.+       +.++..++|+.++++........ ........... ...+.      ...++..+|
T Consensus       151 ~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~d  223 (258)
T PRK08628        151 SGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAIT-AKIPL------GHRMTTAEE  223 (258)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHH-hcCCc------cccCCCHHH
Confidence            68999999999988765       34568899999998742110000 00001111111 11111      113678999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +|++++.++.....  ...+..+.+.++
T Consensus       224 va~~~~~l~~~~~~--~~~g~~~~~~gg  249 (258)
T PRK08628        224 IADTAVFLLSERSS--HTTGQWLFVDGG  249 (258)
T ss_pred             HHHHHHHHhChhhc--cccCceEEecCC
Confidence            99999999876421  122447777654

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.85  E-value=8.3e-20  Score=152.88  Aligned_cols=219  Identities=17%  Similarity=0.159  Sum_probs=149.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      ++++++||||+|+||+++++.|+++|   +.|....|+.++...+....+..+.++.+|++|.+++.++++.    ++++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQG---AIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35899999999999999999999999   7888888877666555444455678889999999998877653    4579


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||.....    ....+++..+++|+.+++ ++++++.    +.+.+++|++||...+.+..          ...
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~  150 (245)
T PRK12936         82 DILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATF-RLTRELTHPMMRRRYGRIINITSVVGVTGNP----------GQA  150 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHhhccHHHH-HHHHHHHHHHHHhCCCEEEEECCHHhCcCCC----------CCc
Confidence            9999999975431    122345678899999985 6766653    24556899999976543221          245


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...+.+.+.+       +.++.+++|+.+..+...    . .. ...........       ....+.+.+|++
T Consensus       151 ~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~----~-~~-~~~~~~~~~~~-------~~~~~~~~~~ia  217 (245)
T PRK12936        151 NYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTG----K-LN-DKQKEAIMGAI-------PMKRMGTGAEVA  217 (245)
T ss_pred             chHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhc----c-cC-hHHHHHHhcCC-------CCCCCcCHHHHH
Confidence            7999999887766543       356788999977544221    0 00 01111111111       122356799999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +++.+++.....  ...+.++++.+|.
T Consensus       218 ~~~~~l~~~~~~--~~~G~~~~~~~g~  242 (245)
T PRK12936        218 SAVAYLASSEAA--YVTGQTIHVNGGM  242 (245)
T ss_pred             HHHHHHcCcccc--CcCCCEEEECCCc
Confidence            999888765321  1235588888763

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.85  E-value=7.7e-20  Score=153.30  Aligned_cols=217  Identities=17%  Similarity=0.163  Sum_probs=145.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhh---hCCCcceEEEeeCCCcccHHHHHHHh---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLD---ALPHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      ++|+|+||||||+||+++++.|+++|   ++|+.+.|+..+ ......   .....+.++.+|++|.+++.++++..   
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQG---ANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE   80 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999999   888777776543 222222   22346778899999999888776643   


Q ss_pred             -CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhh-hcccCCCCcccCC
Q 020880           75 -GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQV-YEGVKSFYKEEDE  144 (320)
Q Consensus        75 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~v-y~~~~~~~~E~~~  144 (320)
                       .++|+|||+||......    ....++..++.|+.++. ++++++..    .+.+++|++||... ++.          
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~v~iss~~~~~~~----------  149 (248)
T PRK05557         81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVF-NLTKAVARPMMKQRSGRIINISSVVGLMGN----------  149 (248)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCeEEEEEcccccCcCC----------
Confidence             47899999999754321    12234566788998875 67666653    45568999999643 332          


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       .+...|+.+|...+.+++.+       +.+++++||+.+..+...     ........... ...+       ...+.+
T Consensus       150 -~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~-----~~~~~~~~~~~-~~~~-------~~~~~~  215 (248)
T PRK05557        150 -PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTD-----ALPEDVKEAIL-AQIP-------LGRLGQ  215 (248)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccc-----ccChHHHHHHH-hcCC-------CCCCcC
Confidence             13567999999999877654       346788999887554321     11112222111 1111       123689


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ++|+++++..++.....  ...+.+|+++++
T Consensus       216 ~~~va~~~~~l~~~~~~--~~~g~~~~i~~~  244 (248)
T PRK05557        216 PEEIASAVAFLASDEAA--YITGQTLHVNGG  244 (248)
T ss_pred             HHHHHHHHHHHcCcccC--CccccEEEecCC
Confidence            99999999888765221  223558999875

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.9e-20  Score=154.56  Aligned_cols=219  Identities=16%  Similarity=0.130  Sum_probs=144.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-CChhhhhh---hCCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      +++++||||+|+||++++++|+++|   +.|+...++. +.......   ..+..+.++.+|++|.+++.++++.    +
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G---~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERG---YAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL   78 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999   6777665443 22222222   2234567899999999988877754    3


Q ss_pred             CCCCEEEECCCccCccc-----cccCchhhhhccccccHHHHHhhhhhcc-------CceEEEeechhhhcccCCCCccc
Q 020880           75 GQPDVVVNCAALSVPRV-----CENDPDSAMSINVPSSLVNWLSSFTENK-------ENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~~~l~~~~~~~-------~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                      +.+|+|||+||......     ...+++..+++|+.+++ ++++++.+.-       -.++|++||...+....      
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------  151 (248)
T PRK06123         79 GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSF-LCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP------  151 (248)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC------
Confidence            57899999999764321     12234577899999986 7776665421       13699999976532211      


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                         .....|+.+|...|.+++.+       +.++.++||+.++++.....    ....++.. .....++.       -+
T Consensus       152 ---~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~----~~~~~~~~-~~~~~p~~-------~~  216 (248)
T PRK06123        152 ---GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG----GEPGRVDR-VKAGIPMG-------RG  216 (248)
T ss_pred             ---CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc----CCHHHHHH-HHhcCCCC-------CC
Confidence               11236999999999977654       45778999999999853211    11122221 21222222       13


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      .+++|++++++.++.....  ...+.+|++.++
T Consensus       217 ~~~~d~a~~~~~l~~~~~~--~~~g~~~~~~gg  247 (248)
T PRK06123        217 GTAEEVARAILWLLSDEAS--YTTGTFIDVSGG  247 (248)
T ss_pred             cCHHHHHHHHHHHhCcccc--CccCCEEeecCC
Confidence            5789999999998875321  123558888765

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.85  E-value=8.9e-20  Score=153.38  Aligned_cols=218  Identities=16%  Similarity=0.149  Sum_probs=149.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      .+|++|||||+|+||++++++|+++|   ++|+++.|+.      ....+..+.++.+|++|++++.++++.    ++.+
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G---~~v~~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAG---AKVIGFDQAF------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPL   77 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecch------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            35799999999999999999999999   8999999875      111234677899999999998887764    3568


Q ss_pred             CEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||......    +..++...+++|+.+++ .+++++.    +.+..++|++||.....+          ..+.+
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~g~iv~~ss~~~~~~----------~~~~~  146 (252)
T PRK08220         78 DVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAF-NLFRAVMPQFRRQRSGAIVTVGSNAAHVP----------RIGMA  146 (252)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhCCCCEEEEECCchhccC----------CCCCc
Confidence            99999999764321    23355678899999986 7777764    344458999999865432          22467


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChH-HHHH---HHHhcCCceEeecCcccCceeH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPI-QWID---SVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .|+.+|...+.+++.+       +.++.+++|+.++++............ ..+.   .....+.       ....++++
T Consensus       147 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  219 (252)
T PRK08220        147 AYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGI-------PLGKIARP  219 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcC-------CCcccCCH
Confidence            8999999999987654       345788999999988532110000000 0000   0111111       23357999


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +|+|++++.++.....  ...+.++.+.+|
T Consensus       220 ~dva~~~~~l~~~~~~--~~~g~~i~~~gg  247 (252)
T PRK08220        220 QEIANAVLFLASDLAS--HITLQDIVVDGG  247 (252)
T ss_pred             HHHHHHHHHHhcchhc--CccCcEEEECCC
Confidence            9999999998865321  223446666665

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.85  E-value=6.9e-20  Score=154.58  Aligned_cols=218  Identities=15%  Similarity=0.154  Sum_probs=147.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-CChhhhhhh---CCCcceEEEeeCCCcccHHHHHHHh----
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      +|++|||||+|+||++++++|+++|   ++|+.+.++. +........   .+..+.++.+|++|.+++.++++.+    
T Consensus         9 ~k~vlItGas~giG~~la~~l~~~g---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          9 PRAALVTGAARRIGRAIALDLAAHG---FDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999   7887776653 222222221   2345778999999999988877643    


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc----cCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN----KENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|+|||+||.....    ....+++..+++|+.+++ .+++++...    +-.++|++||...+....          
T Consensus        86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p----------  154 (258)
T PRK09134         86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPF-VLAQAFARALPADARGLVVNMIDQRVWNLNP----------  154 (258)
T ss_pred             CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCceEEEECchhhcCCCC----------
Confidence            5689999999975431    122345678899999986 777776542    234888888876553221          


Q ss_pred             CcchHHHHHHHHHHHHHHHc------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          147 PVNVYGKSKVAAEKFIYEKC------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ....|+.+|...|.+.+.+.      .++..++|+.+......      ....+ .... ...+.       ....+++|
T Consensus       155 ~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~------~~~~~-~~~~-~~~~~-------~~~~~~~d  219 (258)
T PRK09134        155 DFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ------SPEDF-ARQH-AATPL-------GRGSTPEE  219 (258)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc------ChHHH-HHHH-hcCCC-------CCCcCHHH
Confidence            13579999999998887753      34566888887653211      11111 1111 11111       12477999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCcCH
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR  253 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~  253 (320)
                      +|++++.+++.+..    .+..|++.++..+++
T Consensus       220 ~a~~~~~~~~~~~~----~g~~~~i~gg~~~~~  248 (258)
T PRK09134        220 IAAAVRYLLDAPSV----TGQMIAVDGGQHLAW  248 (258)
T ss_pred             HHHHHHHHhcCCCc----CCCEEEECCCeeccc
Confidence            99999999986433    344888888765444

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.1e-19  Score=154.00  Aligned_cols=220  Identities=16%  Similarity=0.166  Sum_probs=151.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhh---hhCCCcceEEEeeCCCcccHHHHHHHh---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLL---DALPHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      .+|++|||||+|+||.+++++|+++|   ++|++..|+.+. .....   ...+..+.++.+|++|.+.+.++++..   
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G---~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEG---ADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35799999999999999999999999   888888887543 22222   122345778999999999887777543   


Q ss_pred             -CCCCEEEECCCccCcc-----ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 -GQPDVVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 -~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                       +++|+|||+||.....     .+..++...+++|+.+++ ++++++...  ...++|++||...|.....         
T Consensus       122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~a~~~~~~~~g~iV~isS~~~~~~~~~---------  191 (290)
T PRK06701        122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYF-HMTKAALPHLKQGSAIINTGSITGYEGNET---------  191 (290)
T ss_pred             cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHH-HHHHHHHHHHhhCCeEEEEecccccCCCCC---------
Confidence             5799999999975331     112234567899999986 888877642  2248999999988764322         


Q ss_pred             CcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                       ...|+.+|...+.+++.+.       .++..++|+.++.+.....    .....+.. .....       ....+.+++
T Consensus       192 -~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~----~~~~~~~~-~~~~~-------~~~~~~~~~  258 (290)
T PRK06701        192 -LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSD----FDEEKVSQ-FGSNT-------PMQRPGQPE  258 (290)
T ss_pred             -cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccc----cCHHHHHH-HHhcC-------CcCCCcCHH
Confidence             4579999999998777643       4677899999887643211    11111111 11111       123578999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+|+++++++.....  ...+.++++.++.
T Consensus       259 dva~~~~~ll~~~~~--~~~G~~i~idgg~  286 (290)
T PRK06701        259 ELAPAYVFLASPDSS--YITGQMLHVNGGV  286 (290)
T ss_pred             HHHHHHHHHcCcccC--CccCcEEEeCCCc
Confidence            999999999876421  1234588887764

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-19  Score=152.82  Aligned_cols=219  Identities=15%  Similarity=0.124  Sum_probs=148.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~d   78 (320)
                      .++||||||+|+||++++++|+++|   ++|+++.|+........+.....+.++.+|+++++++.++++.    ++++|
T Consensus        15 ~k~vlItGas~~IG~~la~~l~~~G---~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   91 (255)
T PRK06841         15 GKVAVVTGGASGIGHAIAELFAAKG---ARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRID   91 (255)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            5799999999999999999999999   8899999986533222221233466789999999988777654    35789


Q ss_pred             EEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           79 VVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        79 ~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      +|||+||......    ...+.+..+++|+.+++ ++++++..    .+.+++|++||.....+.          .....
T Consensus        92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~  160 (255)
T PRK06841         92 ILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSF-LMAQAVGRHMIAAGGGKIVNLASQAGVVAL----------ERHVA  160 (255)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHH-HHHHHHHHHHHhcCCceEEEEcchhhccCC----------CCCch
Confidence            9999999764321    12344567899999986 77777653    355699999998654221          12458


Q ss_pred             HHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHH
Q 020880          151 YGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK  223 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  223 (320)
                      |+.+|...+.+.+.+       +.++..++|+.+..+........    ... .......+       ...+.+.+|+|+
T Consensus       161 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~----~~~-~~~~~~~~-------~~~~~~~~~va~  228 (255)
T PRK06841        161 YCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAG----EKG-ERAKKLIP-------AGRFAYPEEIAA  228 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccch----hHH-HHHHhcCC-------CCCCcCHHHHHH
Confidence            999999998877654       34567799998876532111000    011 11111111       234789999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCCC
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +++.++..+..  ...+.++.+.+|.
T Consensus       229 ~~~~l~~~~~~--~~~G~~i~~dgg~  252 (255)
T PRK06841        229 AALFLASDAAA--MITGENLVIDGGY  252 (255)
T ss_pred             HHHHHcCcccc--CccCCEEEECCCc
Confidence            99999876422  2235578887764

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1e-19  Score=151.65  Aligned_cols=209  Identities=15%  Similarity=0.138  Sum_probs=146.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC--CcceEEEeeCCCcccHHHHHHHh----CC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--HSFVFFDVDLKSGSGFDAVALKF----GQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~----~~   76 (320)
                      +++|+||||||+||++++++|+++|   ++|++++|++++...+.+.+.  ..+.++.+|+.|.+++.++++.+    ++
T Consensus         6 ~~~ilItGatg~iG~~la~~l~~~g---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          6 GKVALITGGSKGIGFAIAEALLAEG---YKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCC---CEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999   889999998765554444332  45778999999999887777643    57


Q ss_pred             CCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh---ccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           77 PDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE---NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        77 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      +|+|||+|+.....    ....+.+..+++|+.+++ .+++++.+   .+.+++|++||...+..          ..+..
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------~~~~~  151 (237)
T PRK07326         83 LDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAF-YTIKAAVPALKRGGGYIINISSLAGTNF----------FAGGA  151 (237)
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHH-HHHHHHHHHHHHCCeEEEEECChhhccC----------CCCCc
Confidence            99999999875432    122234567889999986 77777653   34458999999876532          22356


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...+.+.+.+       +.+++++||+.+..+.....     .          ...       ....+..+|++
T Consensus       152 ~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-----~----------~~~-------~~~~~~~~d~a  209 (237)
T PRK07326        152 AYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-----P----------SEK-------DAWKIQPEDIA  209 (237)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc-----c----------chh-------hhccCCHHHHH
Confidence            7999999888877653       45788999999876532110     0          000       00136789999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ++++.++..+.   ......+.+..+++
T Consensus       210 ~~~~~~l~~~~---~~~~~~~~~~~~~~  234 (237)
T PRK07326        210 QLVLDLLKMPP---RTLPSKIEVRPSRP  234 (237)
T ss_pred             HHHHHHHhCCc---cccccceEEecCCC
Confidence            99999998753   22334555544443

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.84  E-value=1.4e-19  Score=151.62  Aligned_cols=219  Identities=16%  Similarity=0.136  Sum_probs=143.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEe-cCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHHh----
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      |++++||||+|+||++++++|+++|   ++|++. .|+++.......   ..+..+.++.+|++|++++.++++.+    
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   77 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEG---YTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHD   77 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999   787764 455443333222   22345778999999999988877643    


Q ss_pred             CCCCEEEECCCccCccc-----cccCchhhhhccccccHHHHHhhhhhc-------cCceEEEeechhhhcccCCCCccc
Q 020880           75 GQPDVVVNCAALSVPRV-----CENDPDSAMSINVPSSLVNWLSSFTEN-------KENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~~~l~~~~~~-------~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                      +.+|+|||+||......     ...+.+..+++|+.+++ .+++++...       +..+||++||...+.+..      
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~------  150 (247)
T PRK09730         78 EPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYF-LCCREAVKRMALKHGGSGGAIVNVSSAASRLGAP------  150 (247)
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHhcCCCCCcEEEEECchhhccCCC------
Confidence            57899999999753221     11234577899999985 555554332       124799999986543211      


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                         .....|+.+|...|.+++.+       +.+++++||+.++++......   . ...+.. .....++.       -.
T Consensus       151 ---~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~---~-~~~~~~-~~~~~~~~-------~~  215 (247)
T PRK09730        151 ---GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG---E-PGRVDR-VKSNIPMQ-------RG  215 (247)
T ss_pred             ---CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC---C-HHHHHH-HHhcCCCC-------CC
Confidence               11246999999999877653       456789999999998642211   1 112221 11222221       12


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      .+.+|+|++++.++.....  ...+..|++.++
T Consensus       216 ~~~~dva~~~~~~~~~~~~--~~~g~~~~~~g~  246 (247)
T PRK09730        216 GQPEEVAQAIVWLLSDKAS--YVTGSFIDLAGG  246 (247)
T ss_pred             cCHHHHHHHHHhhcChhhc--CccCcEEecCCC
Confidence            4789999999998875421  123446776653

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.84  E-value=1.3e-19  Score=153.01  Aligned_cols=222  Identities=18%  Similarity=0.135  Sum_probs=149.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+|++|||||+|+||++++++|+++|   ++|+.++|+.++.+.....   .+.++.++.+|++|++++.++++.    +
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAG---ARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            35899999999999999999999999   8899999986554433322   234567899999999998666653    3


Q ss_pred             CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhhc-----cCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTEN-----KENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~~-----~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +.+|+|||+||......    ....++..++.|+.+++ ++++++...     +.+++|++||...+......      .
T Consensus        88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~------~  160 (259)
T PRK08213         88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLF-LLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE------V  160 (259)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHH-HHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc------c
Confidence            57899999999753221    12234567789999986 888876543     55699999998765432210      1


Q ss_pred             CCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...|.+++.+.       .++.+++|+.+-.+...     ..+..+... +..+.++.       -+...
T Consensus       161 ~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~-----~~~~~~~~~-~~~~~~~~-------~~~~~  227 (259)
T PRK08213        161 MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR-----GTLERLGED-LLAHTPLG-------RLGDD  227 (259)
T ss_pred             cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh-----hhhHHHHHH-HHhcCCCC-------CCcCH
Confidence            245689999999999887653       34567888777544221     112222222 22232322       24568


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +|++.++.+++.....  ...+..+++.++
T Consensus       228 ~~va~~~~~l~~~~~~--~~~G~~~~~~~~  255 (259)
T PRK08213        228 EDLKGAALLLASDASK--HITGQILAVDGG  255 (259)
T ss_pred             HHHHHHHHHHhCcccc--CccCCEEEECCC
Confidence            9999999888865321  223557777665

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.1e-19  Score=153.83  Aligned_cols=220  Identities=16%  Similarity=0.144  Sum_probs=148.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .++++|||||+|+||.++++.|+++|   ++|++++|+.++.+.+.+.+   +..+.++.+|+++++++.++++.    +
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G---~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAG---ADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999   89999999866554443322   34577889999999988776653    3


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh-----ccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE-----NKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~-----~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +++|+|||+||.....    ....+++..+++|+.+++ ++++++..     .+..++|++||.....+          .
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------~  154 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAH-ALTVAAVPLMLEHSGGGSVINISSTMGRLA----------G  154 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHH-HHHHHHHHHHHhhcCCeEEEEEccccccCC----------C
Confidence            5799999999864332    122345678899999986 88888763     34568999999754321          2


Q ss_pred             CCcchHHHHHHHHHHHHHHHcC------CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          146 APVNVYGKSKVAAEKFIYEKCS------NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~~------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      .+.+.|+.+|...+.+++.+..      ++..++|+.+..+........   ..+ ...+....+       .......+
T Consensus       155 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~---~~~-~~~~~~~~~-------~~~~~~~~  223 (263)
T PRK07814        155 RGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAAN---DEL-RAPMEKATP-------LRRLGDPE  223 (263)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCC---HHH-HHHHHhcCC-------CCCCcCHH
Confidence            3466899999999998876532      455688887754421100000   011 111111111       11246889


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      |+|++++.++.....  ...+..+.+.++
T Consensus       224 ~va~~~~~l~~~~~~--~~~g~~~~~~~~  250 (263)
T PRK07814        224 DIAAAAVYLASPAGS--YLTGKTLEVDGG  250 (263)
T ss_pred             HHHHHHHHHcCcccc--CcCCCEEEECCC
Confidence            999999999865321  123446666554

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.84  E-value=2.3e-19  Score=152.79  Aligned_cols=222  Identities=18%  Similarity=0.154  Sum_probs=169.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|||||||||+|++++++|+++|   ++|.+..|++++...+.    ..+++..+|+.++.++...++   +.|.++++
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~---~~v~~~~r~~~~~~~~~----~~v~~~~~d~~~~~~l~~a~~---G~~~~~~i   70 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARG---HEVRAAVRNPEAAAALA----GGVEVVLGDLRDPKSLVAGAK---GVDGVLLI   70 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCC---CEEEEEEeCHHHHHhhc----CCcEEEEeccCCHhHHHHHhc---cccEEEEE
Confidence            579999999999999999999999   89999999988776665    578889999999999988887   89999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhh--ccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE--NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKF  161 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~--~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~  161 (320)
                      .+... ...   +  ......    ..+++.+++  .+.++++++|....-.            .....|..+|..+|+.
T Consensus        71 ~~~~~-~~~---~--~~~~~~----~~~~~~a~~a~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~e~~  128 (275)
T COG0702          71 SGLLD-GSD---A--FRAVQV----TAVVRAAEAAGAGVKHGVSLSVLGADA------------ASPSALARAKAAVEAA  128 (275)
T ss_pred             ecccc-ccc---c--hhHHHH----HHHHHHHHHhcCCceEEEEeccCCCCC------------CCccHHHHHHHHHHHH
Confidence            87643 111   0  111111    133334433  3466888888776532            1355899999999999


Q ss_pred             HHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCc
Q 020880          162 IYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL  241 (320)
Q Consensus       162 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  241 (320)
                      +...+.+++++|+..+|.....         .++......+.+....+.+..+++..+|++.++..++..+..    .++
T Consensus       129 l~~sg~~~t~lr~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~----~~~  195 (275)
T COG0702         129 LRSSGIPYTTLRRAAFYLGAGA---------AFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPAT----AGR  195 (275)
T ss_pred             HHhcCCCeEEEecCeeeeccch---------hHHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcc----cCc
Confidence            9999999999997776655431         112233445555555556678999999999999999987643    345


Q ss_pred             eeEecCCCCcCHHHHHHHHHHHhCCCCCc
Q 020880          242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSL  270 (320)
Q Consensus       242 ~~n~~~~~~~s~~e~~~~i~~~~~~~~~~  270 (320)
                      +|.+.+++..+..+++..+.+..+++...
T Consensus       196 ~~~l~g~~~~~~~~~~~~l~~~~gr~~~~  224 (275)
T COG0702         196 TYELAGPEALTLAELASGLDYTIGRPVGL  224 (275)
T ss_pred             EEEccCCceecHHHHHHHHHHHhCCccee
Confidence            99999999999999999999999988765

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.84  E-value=5.7e-20  Score=154.16  Aligned_cols=204  Identities=18%  Similarity=0.181  Sum_probs=141.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCCCE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQPDV   79 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~d~   79 (320)
                      |+|+||||||+||.++++.|+++|   ++|+++.|++++...+....+..+.++.+|++|.+++.++++.    ++++|+
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQG---HKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            579999999999999999999999   8999999987666555554445678899999999988776653    357999


Q ss_pred             EEECCCccCc-----cccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchH
Q 020880           80 VVNCAALSVP-----RVCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVY  151 (320)
Q Consensus        80 Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y  151 (320)
                      |||+||....     ..+..+++..+++|+.+++   ..++.++++.+.+++|++||...+..          ..+...|
T Consensus        78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------~~~~~~Y  147 (248)
T PRK10538         78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP----------YAGGNVY  147 (248)
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC----------CCCCchh
Confidence            9999986421     1123345677899999864   23444455566679999999765421          2235689


Q ss_pred             HHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHH
Q 020880          152 GKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI  224 (320)
Q Consensus       152 ~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  224 (320)
                      +.+|...+.+.+.+.       .++.+++|+.+.|+........... .......           ....++..+|+|++
T Consensus       148 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~-~~~~~~~-----------~~~~~~~~~dvA~~  215 (248)
T PRK10538        148 GATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDD-GKAEKTY-----------QNTVALTPEDVSEA  215 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcH-HHHHhhc-----------cccCCCCHHHHHHH
Confidence            999999999876642       3567899999986642100000000 0000000           01135789999999


Q ss_pred             HHHHHhhh
Q 020880          225 ILALTNRW  232 (320)
Q Consensus       225 ~~~~~~~~  232 (320)
                      ++.++..+
T Consensus       216 ~~~l~~~~  223 (248)
T PRK10538        216 VWWVATLP  223 (248)
T ss_pred             HHHHhcCC
Confidence            99998753

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.84  E-value=5.2e-20  Score=156.66  Aligned_cols=195  Identities=17%  Similarity=0.125  Sum_probs=139.6

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----CC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----GQ   76 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~   76 (320)
                      |++++++||||||.||++++++|+++|   ++|++..|+++.......... .+.++.+|++|++++.++++.+    ++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G---~~v~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALG---ARVAIGDLDEALAKETAAELG-LVVGGPLDVTDPASFAAFLDAVEADLGP   78 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhc-cceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            345899999999999999999999999   889999998766555444332 4677899999999887766543    57


Q ss_pred             CCEEEECCCccCcccc----ccCchhhhhccccccHHHHH----hhhhhccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           77 PDVVVNCAALSVPRVC----ENDPDSAMSINVPSSLVNWL----SSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~~~l----~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      +|++||+||.......    .......+++|+.+++ .+.    ..+.+.+..+||++||...+.+.          .+.
T Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~  147 (273)
T PRK07825         79 IDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVI-LGSKLAAPRMVPRGRGHVVNVASLAGKIPV----------PGM  147 (273)
T ss_pred             CCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCEEEEEcCccccCCC----------CCC
Confidence            8999999997643211    1233567889998875 544    44455666799999998765432          236


Q ss_pred             chHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          149 NVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      ..|+.+|...+.+.+.+       +.++++++|+.+-.+-..                  +..    +.....++..+|+
T Consensus       148 ~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~------------------~~~----~~~~~~~~~~~~v  205 (273)
T PRK07825        148 ATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA------------------GTG----GAKGFKNVEPEDV  205 (273)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc------------------ccc----cccCCCCCCHHHH
Confidence            68999999887755442       457888999887433210                  000    0111236899999


Q ss_pred             HHHHHHHHhhh
Q 020880          222 VKIILALTNRW  232 (320)
Q Consensus       222 a~~~~~~~~~~  232 (320)
                      |+.++.++.++
T Consensus       206 a~~~~~~l~~~  216 (273)
T PRK07825        206 AAAIVGTVAKP  216 (273)
T ss_pred             HHHHHHHHhCC
Confidence            99999999874

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.2e-19  Score=151.75  Aligned_cols=223  Identities=18%  Similarity=0.214  Sum_probs=148.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      .+|+||||||+|.||++++++|.++|   ++|+++.|+.+..      ....+.++.+|++|++++.++++    .++++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~r~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   78 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAG---ARVVTTARSRPDD------LPEGVEFVAADLTTAEGCAAVARAVLERLGGV   78 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCC---CEEEEEeCChhhh------cCCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            35899999999999999999999999   8999999985432      13457789999999998776554    34679


Q ss_pred             CEEEECCCccCcc------ccccCchhhhhccccccHHHHHh----hhhhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           78 DVVVNCAALSVPR------VCENDPDSAMSINVPSSLVNWLS----SFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        78 d~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~~~l~----~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      |+|||+||.....      ....+++..+++|+.+++ ++.+    .+++.+..++|++||...+.+.         ..+
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~g~ii~isS~~~~~~~---------~~~  148 (260)
T PRK06523         79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAV-RLDRALLPGMIARGSGVIIHVTSIQRRLPL---------PES  148 (260)
T ss_pred             CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHH-HHHHHHHHHHHhcCCcEEEEEecccccCCC---------CCC
Confidence            9999999964211      223446677889999885 5544    4445555689999998765421         113


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCC------CCChHHHHHHHHh--cCCceEeecCcc
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVP------KSLPIQWIDSVLS--KGEKVEFFHDEC  212 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~------~~~~~~~~~~~~~--~~~~~~~~~~~~  212 (320)
                      ...|+.+|...+.+++.+       +.++.+++|+.+..+.......      .............  .+.+       .
T Consensus       149 ~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~  221 (260)
T PRK06523        149 TTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIP-------L  221 (260)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCc-------c
Confidence            568999999999877764       3467889999998764210000      0000000000000  1111       1


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      ..+...+|+|+++..++.....  ...+..+.+.+|...|
T Consensus       222 ~~~~~~~~va~~~~~l~s~~~~--~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        222 GRPAEPEEVAELIAFLASDRAA--SITGTEYVIDGGTVPT  259 (260)
T ss_pred             CCCCCHHHHHHHHHHHhCcccc--cccCceEEecCCccCC
Confidence            2356789999999999865322  2234588888776544

>PRK06196 oxidoreductase; Provisional

Probab=99.84  E-value=5.9e-20  Score=159.40  Aligned_cols=218  Identities=15%  Similarity=0.122  Sum_probs=145.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----CCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----GQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~~   77 (320)
                      .+|+|+||||||+||++++++|+++|   ++|++++|+.++......... .+.++.+|++|.++++++++.+    +++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G---~~Vv~~~R~~~~~~~~~~~l~-~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i  100 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAG---AHVIVPARRPDVAREALAGID-GVEVVMLDLADLESVRAFAERFLDSGRRI  100 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhh-hCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            46899999999999999999999999   899999998766555444332 3678999999999988877643    579


Q ss_pred             CEEEECCCccCcc--ccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCC--CcccCCCCCcch
Q 020880           78 DVVVNCAALSVPR--VCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSF--YKEEDEIAPVNV  150 (320)
Q Consensus        78 d~Vih~a~~~~~~--~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~--~~E~~~~~p~~~  150 (320)
                      |+|||+||.....  ......+..+++|+.+++   ..++..+++.+..++|++||..........  .+...+..+...
T Consensus       101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~  180 (315)
T PRK06196        101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLA  180 (315)
T ss_pred             CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHH
Confidence            9999999975432  122345677899999864   234445555555699999997653221110  111223445678


Q ss_pred             HHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCCh-HHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          151 YGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLP-IQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      |+.||...+.+.+.+       +.++.++|||.+.++-.......... ..++..   .+.++.      ..+...+|+|
T Consensus       181 Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~~a  251 (315)
T PRK06196        181 YGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDE---HGNPID------PGFKTPAQGA  251 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhh---hhhhhh------hhcCCHhHHH
Confidence            999999999877654       35678899999988753211000000 001110   011110      0135689999


Q ss_pred             HHHHHHHhhh
Q 020880          223 KIILALTNRW  232 (320)
Q Consensus       223 ~~~~~~~~~~  232 (320)
                      ..++.++..+
T Consensus       252 ~~~~~l~~~~  261 (315)
T PRK06196        252 ATQVWAATSP  261 (315)
T ss_pred             HHHHHHhcCC
Confidence            9999998753

>PRK07985 oxidoreductase; Provisional

Probab=99.84  E-value=2.3e-19  Score=154.00  Aligned_cols=220  Identities=16%  Similarity=0.130  Sum_probs=149.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC--Chhhhh---hhCCCcceEEEeeCCCcccHHHHHHH----
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP--LPQLLL---DALPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~--~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      .|+++||||+|+||++++++|+++|   ++|++..|+.+  ..+.+.   ...+..+.++.+|++|.+++.++++.    
T Consensus        49 ~k~vlITGas~gIG~aia~~L~~~G---~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         49 DRKALVTGGDSGIGRAAAIAYAREG---ADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCC---CEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4799999999999999999999999   88888776532  222222   22234567789999999988766643    


Q ss_pred             hCCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCC
Q 020880           74 FGQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++++|++||+||....     ..+..+++..+++|+.+++ .+++++...  .-.+||++||...+....          
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~m~~~g~iv~iSS~~~~~~~~----------  194 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALF-WLTQEAIPLLPKGASIITTSSIQAYQPSP----------  194 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHhhhcCCEEEEECCchhccCCC----------
Confidence            4679999999986421     2223456788999999986 777777542  124899999998875432          


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      ....|+.+|...+.+++.+       +.++.+++|+.|.++-....   ......... .....++       ..+...+
T Consensus       195 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~---~~~~~~~~~-~~~~~~~-------~r~~~pe  263 (294)
T PRK07985        195 HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG---GQTQDKIPQ-FGQQTPM-------KRAGQPA  263 (294)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccccccc---CCCHHHHHH-HhccCCC-------CCCCCHH
Confidence            2458999999999877654       45678899999998753110   001111111 1111111       2356799


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+|++++.++.....  -..+.++.+.+|.
T Consensus       264 dva~~~~fL~s~~~~--~itG~~i~vdgG~  291 (294)
T PRK07985        264 ELAPVYVYLASQESS--YVTAEVHGVCGGE  291 (294)
T ss_pred             HHHHHHHhhhChhcC--CccccEEeeCCCe
Confidence            999999999875322  1224477887764

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.7e-19  Score=151.65  Aligned_cols=219  Identities=15%  Similarity=0.104  Sum_probs=149.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----CCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----GQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~~d   78 (320)
                      +|+++||||+|.||++++++|+++|   ++|+++.|+.+.     ...+..+.++.+|++|++++.++++.+    +++|
T Consensus         6 ~k~~lItGas~gIG~~la~~l~~~g---~~v~~~~r~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   77 (252)
T PRK07856          6 GRVVLVTGGTRGIGAGIARAFLAAG---ATVVVCGRRAPE-----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLD   77 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCChhh-----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999   889999998643     112345778999999999888777643    6789


Q ss_pred             EEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh-----ccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           79 VVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE-----NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        79 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~-----~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      +|||+||.....    ....+++..+++|+.+++ .+++++..     .+..++|++||...+.+.          ....
T Consensus        78 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~~~~  146 (252)
T PRK07856         78 VLVNNAGGSPYALAAEASPRFHEKIVELNLLAPL-LVAQAANAVMQQQPGGGSIVNIGSVSGRRPS----------PGTA  146 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCcEEEEEcccccCCCC----------CCCc
Confidence            999999975322    122344677899999986 77777643     233589999998765432          2356


Q ss_pred             hHHHHHHHHHHHHHHHcC------CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHH
Q 020880          150 VYGKSKVAAEKFIYEKCS------NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK  223 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~~------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  223 (320)
                      .|+.+|...|.+++.+..      ++..++|+.+..+........  . ..... +....+       ...+...+|+|+
T Consensus       147 ~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~--~-~~~~~-~~~~~~-------~~~~~~p~~va~  215 (252)
T PRK07856        147 AYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGD--A-EGIAA-VAATVP-------LGRLATPADIAW  215 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccC--H-HHHHH-HhhcCC-------CCCCcCHHHHHH
Confidence            899999999998876532      345688988866532110000  0 11111 111111       123567899999


Q ss_pred             HHHHHHhhhhccccccCceeEecCCCCcCH
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGPDRVSR  253 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~  253 (320)
                      +++.++.....  -..+..+.+.+|...+.
T Consensus       216 ~~~~L~~~~~~--~i~G~~i~vdgg~~~~~  243 (252)
T PRK07856        216 ACLFLASDLAS--YVSGANLEVHGGGERPA  243 (252)
T ss_pred             HHHHHcCcccC--CccCCEEEECCCcchHH
Confidence            99998865321  22355888887755443

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.84  E-value=6e-20  Score=152.29  Aligned_cols=217  Identities=17%  Similarity=0.066  Sum_probs=150.4

Q ss_pred             EEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC--CCcceEEEeeCCCcccHHHHHHHhCCCCEEEECC
Q 020880            7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCA   84 (320)
Q Consensus         7 lItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a   84 (320)
                      |||||+|+||++++++|+++|   ++|+++.|+++.........  +.+++++.+|++|++++.++++.++++|++||+|
T Consensus         1 lItGas~~iG~~~a~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~a   77 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEG---ARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITA   77 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECC
Confidence            699999999999999999999   89999999865554443322  3457789999999999999998877799999999


Q ss_pred             CccCcc----ccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHH
Q 020880           85 ALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK  160 (320)
Q Consensus        85 ~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  160 (320)
                      |.....    ....+++..+++|+.+.+ ++.++....+..++|++||...+...          .+.+.|+.+|...+.
T Consensus        78 g~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~g~iv~~ss~~~~~~~----------~~~~~Y~~sK~a~~~  146 (230)
T PRK07041         78 ADTPGGPVRALPLAAAQAAMDSKFWGAY-RVARAARIAPGGSLTFVSGFAAVRPS----------ASGVLQGAINAALEA  146 (230)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHHHHHH-HHHhhhhhcCCeEEEEECchhhcCCC----------CcchHHHHHHHHHHH
Confidence            975432    122345678899999986 78876555556699999999887532          236689999999999


Q ss_pred             HHHHHcC-----CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhcc
Q 020880          161 FIYEKCS-----NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE  235 (320)
Q Consensus       161 ~~~~~~~-----~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  235 (320)
                      +.+.+..     +...++|+.+-.+..... ........+.... ...+.       ..+...+|+|++++.++....  
T Consensus       147 ~~~~la~e~~~irv~~i~pg~~~t~~~~~~-~~~~~~~~~~~~~-~~~~~-------~~~~~~~dva~~~~~l~~~~~--  215 (230)
T PRK07041        147 LARGLALELAPVRVNTVSPGLVDTPLWSKL-AGDAREAMFAAAA-ERLPA-------RRVGQPEDVANAILFLAANGF--  215 (230)
T ss_pred             HHHHHHHHhhCceEEEEeecccccHHHHhh-hccchHHHHHHHH-hcCCC-------CCCcCHHHHHHHHHHHhcCCC--
Confidence            8887654     345667776644321100 0000011111111 11111       124578999999999987532  


Q ss_pred             ccccCceeEecCCCC
Q 020880          236 DKQMQLLLNVGGPDR  250 (320)
Q Consensus       236 ~~~~~~~~n~~~~~~  250 (320)
                        ..+..|++.+|..
T Consensus       216 --~~G~~~~v~gg~~  228 (230)
T PRK07041        216 --TTGSTVLVDGGHA  228 (230)
T ss_pred             --cCCcEEEeCCCee
Confidence              2345899988754

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=1.2e-19  Score=151.48  Aligned_cols=196  Identities=16%  Similarity=0.152  Sum_probs=141.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      +++++||||+|+||.+++++|+++|   ++|++++|+.++......   ..+.++.++.+|+++++++.++++.    ++
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G---~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEG---VNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELG   83 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999   899999998655443322   2234677889999999988777764    35


Q ss_pred             CCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++|+|||+||......    ...+.+..+++|+.+++ ++++++.    +.+.+++|++||...+.+.          .+
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------~~  152 (239)
T PRK07666         84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVY-YATRAVLPSMIERQSGDIINISSTAGQKGA----------AV  152 (239)
T ss_pred             CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhCCCcEEEEEcchhhccCC----------CC
Confidence            7999999998754321    22334677899999885 6766664    4455689999998765432          23


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+++.+       +.++.++||+.+..+....         .   ....+.        ...++..+|
T Consensus       153 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~---------~---~~~~~~--------~~~~~~~~~  212 (239)
T PRK07666        153 TSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVD---------L---GLTDGN--------PDKVMQPED  212 (239)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhh---------c---cccccC--------CCCCCCHHH
Confidence            567999999988876543       4568899999987653210         0   000111        123578999


Q ss_pred             HHHHHHHHHhhh
Q 020880          221 VVKIILALTNRW  232 (320)
Q Consensus       221 ~a~~~~~~~~~~  232 (320)
                      +|+++..++.++
T Consensus       213 ~a~~~~~~l~~~  224 (239)
T PRK07666        213 LAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHhCC
Confidence            999999999874

>PRK08324 short chain dehydrogenase; Validated

Probab=99.84  E-value=3.9e-20  Score=175.57  Aligned_cols=227  Identities=15%  Similarity=0.201  Sum_probs=155.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC--CcceEEEeeCCCcccHHHHHHH----hC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--HSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      .+++||||||+|+||+++++.|+++|   ++|++++|+.+........+.  ..+.++.+|++|++++.++++.    ++
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~G---a~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g  497 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEG---ACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFG  497 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCc---CEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            45899999999999999999999999   889999998766554444333  2677899999999988776654    45


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccC-ceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKE-NLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|+|||+||.....    .+...++..+++|+.++. .+++++.    +.+. .+||++||...+.+.          .
T Consensus       498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~----------~  566 (681)
T PRK08324        498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHF-LVAREAVRIMKAQGLGGSIVFIASKNAVNPG----------P  566 (681)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCcEEEEECCccccCCC----------C
Confidence            799999999975432    122345677889999985 7755553    4443 589999998765332          2


Q ss_pred             CcchHHHHHHHHHHHHHHHc-------CCeeEEeecccc-cCCCCCCCCCCChHHHHHHHHhcCCceE----ee--cCcc
Q 020880          147 PVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIY-GPQTISPVPKSLPIQWIDSVLSKGEKVE----FF--HDEC  212 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~  212 (320)
                      +...|+.+|...+.+++.+.       .++.+++|+.|| +......   ...   .......+....    ..  +...
T Consensus       567 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~---~~~---~~~~~~~g~~~~~~~~~~~~~~~l  640 (681)
T PRK08324        567 NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG---EWI---EARAAAYGLSEEELEEFYRARNLL  640 (681)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccc---hhh---hhhhhhccCChHHHHHHHHhcCCc
Confidence            35689999999999887752       456789999998 5532110   000   000000111100    11  2235


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +.+++++|+|++++.++....  ....+.+|++++|..
T Consensus       641 ~~~v~~~DvA~a~~~l~s~~~--~~~tG~~i~vdgG~~  676 (681)
T PRK08324        641 KREVTPEDVAEAVVFLASGLL--SKTTGAIITVDGGNA  676 (681)
T ss_pred             CCccCHHHHHHHHHHHhCccc--cCCcCCEEEECCCch
Confidence            678999999999999885221  122355899988754

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.84  E-value=3.8e-19  Score=149.85  Aligned_cols=222  Identities=16%  Similarity=0.149  Sum_probs=150.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+|+|+||||+|+||++++++|.++|   ++|+..+|+.+....+...   .+..+.++.+|++|.+++.++++.    +
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G---~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999   8898888886655443322   234567789999999988776653    3


Q ss_pred             CCCCEEEECCCccCccc---cccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           75 GQPDVVVNCAALSVPRV---CENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~---~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +++|+|||+||...+..   ...+++..+++|+.+++ ++++++.    +.+..++|++||.....+          ..+
T Consensus        87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------~~~  155 (255)
T PRK06113         87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFF-HLSQLVAPEMEKNGGGVILTITSMAAENK----------NIN  155 (255)
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHH-HHHHHHHHHHHhcCCcEEEEEecccccCC----------CCC
Confidence            67899999999754322   22344566899999986 7887775    334458999999875422          224


Q ss_pred             cchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+++.+.       .++.++.|+.+--+...    .......... ..+..++       ..+...+|
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~----~~~~~~~~~~-~~~~~~~-------~~~~~~~d  223 (255)
T PRK06113        156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK----SVITPEIEQK-MLQHTPI-------RRLGQPQD  223 (255)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccc----cccCHHHHHH-HHhcCCC-------CCCcCHHH
Confidence            5689999999999887753       24556777776543211    1111112211 1122121       23578999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      ++++++.++.....  ...+.++++.++...
T Consensus       224 ~a~~~~~l~~~~~~--~~~G~~i~~~gg~~~  252 (255)
T PRK06113        224 IANAALFLCSPAAS--WVSGQILTVSGGGVQ  252 (255)
T ss_pred             HHHHHHHHcCcccc--CccCCEEEECCCccc
Confidence            99999999864321  223568899887543

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.8e-19  Score=147.26  Aligned_cols=214  Identities=17%  Similarity=0.131  Sum_probs=145.7

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh---CCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF---GQP   77 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~~   77 (320)
                      |..|+|+||||+|+||++++++|+++|   ++|+++.|+.+..      .  ...++.+|++|.+++.++++.+   .++
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G---~~v~~~~r~~~~~------~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~   69 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLG---HQVIGIARSAIDD------F--PGELFACDLADIEQTAATLAQINEIHPV   69 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEEeCCcccc------c--CceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            667899999999999999999999999   8999999986541      1  1246899999999877766532   268


Q ss_pred             CEEEECCCccCccc----cccCchhhhhccccccHHHHH----hhhhhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWL----SSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l----~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||......    ...++...++.|+.+++ ++.    ..+++.+.+++|++||...|+..           ...
T Consensus        70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~  137 (234)
T PRK07577         70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAV-QVTQAFLEGMKLREQGRIVNICSRAIFGAL-----------DRT  137 (234)
T ss_pred             cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCcEEEEEccccccCCC-----------Cch
Confidence            99999999864422    22344567889998874 544    44455666799999999876532           246


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...|.+++.+       +.+++++||+.+..+........  ......... ...+.       ......+|+|
T Consensus       138 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~--~~~~~~~~~-~~~~~-------~~~~~~~~~a  207 (234)
T PRK07577        138 SYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPV--GSEEEKRVL-ASIPM-------RRLGTPEEVA  207 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccccccc--chhHHHHHh-hcCCC-------CCCcCHHHHH
Confidence            8999999999877653       45778999999986642111000  000111111 11111       1245789999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .+++.++..+..  ...+..+.+.++.
T Consensus       208 ~~~~~l~~~~~~--~~~g~~~~~~g~~  232 (234)
T PRK07577        208 AAIAFLLSDDAG--FITGQVLGVDGGG  232 (234)
T ss_pred             HHHHHHhCcccC--CccceEEEecCCc
Confidence            999999876422  1234577777654

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.4e-19  Score=151.12  Aligned_cols=197  Identities=17%  Similarity=0.199  Sum_probs=142.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      ||+++||||+|.||++++++|+++|   ++|+++.|++++...+.+.   .+.++.++.+|++|++++..+++.    ++
T Consensus         6 ~k~vlItG~sg~iG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          6 MPRALITGASSGIGKATALAFAKAG---WDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            6799999999999999999999999   8999999987654443332   234677899999999987766653    35


Q ss_pred             CCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++|+|||+||......    ...+.+..+++|+.+++ ++++.+    .+.+..++|++||...+++.          .+
T Consensus        83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~  151 (241)
T PRK07454         83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVF-QCCSAVLPGMRARGGGLIINVSSIAARNAF----------PQ  151 (241)
T ss_pred             CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHH-HHHHHHHHHHHhcCCcEEEEEccHHhCcCC----------CC
Confidence            7999999999754321    22345667889999875 655554    44555699999999887643          23


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+.+.+       +.++.++||+.+-.+.....   .     .....           ....++..+|
T Consensus       152 ~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~---~-----~~~~~-----------~~~~~~~~~~  212 (241)
T PRK07454        152 WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE---T-----VQADF-----------DRSAMLSPEQ  212 (241)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc---c-----ccccc-----------ccccCCCHHH
Confidence            568999999999877643       46788999999876532100   0     00000           0112478999


Q ss_pred             HHHHHHHHHhhh
Q 020880          221 VVKIILALTNRW  232 (320)
Q Consensus       221 ~a~~~~~~~~~~  232 (320)
                      +|++++.++..+
T Consensus       213 va~~~~~l~~~~  224 (241)
T PRK07454        213 VAQTILHLAQLP  224 (241)
T ss_pred             HHHHHHHHHcCC
Confidence            999999999875

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.83  E-value=5.3e-20  Score=160.21  Aligned_cols=176  Identities=18%  Similarity=0.193  Sum_probs=126.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHHh----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      .+++|+||||+|+||.+++++|+++|   ++|++++|+.++.......+   ...+.++.+|++|.+++.++++.+    
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRG---WHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            36899999999999999999999999   89999999876655444332   235778899999999988877643    


Q ss_pred             CCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhhhh----cc--CceEEEeechhhhccc---C--C-
Q 020880           75 GQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFTE----NK--ENLLIHLSTDQVYEGV---K--S-  137 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~--~~~~v~~Ss~~vy~~~---~--~-  137 (320)
                      +++|+|||+||....     ..+...++..+++|+.+++ ++++++..    .+  ..+||++||...+...   .  . 
T Consensus        82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~  160 (322)
T PRK07453         82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHF-LLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP  160 (322)
T ss_pred             CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHH-HHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence            359999999997532     1223346778899999986 66665543    32  2499999998764311   0  0 


Q ss_pred             -CCc------------------ccCCCCCcchHHHHHHHHHHHHHHH--------cCCeeEEeecccccCC
Q 020880          138 -FYK------------------EEDEIAPVNVYGKSKVAAEKFIYEK--------CSNFAILRSSIIYGPQ  181 (320)
Q Consensus       138 -~~~------------------E~~~~~p~~~Y~~sK~~~e~~~~~~--------~~~~~ilR~~~v~G~~  181 (320)
                       +.+                  +..+..|...|+.||...+.+.+.+        +..+.++|||.|++..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence             001                  1233467789999999877655443        2356789999998754

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.4e-19  Score=150.61  Aligned_cols=223  Identities=14%  Similarity=0.095  Sum_probs=150.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      ++|+++||||+|.||++++++|+++|   ++|++++|+.+....+....+..+.++.+|++|.+++.++++.    ++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAG---ARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            36899999999999999999999999   8999999987766655555555678899999999988777654    3679


Q ss_pred             CEEEECCCccCc---cccccCchhhhhccccccHHHHHhhhhh---ccCceEEEeechhhhcccCCCCcccCCCCCcchH
Q 020880           78 DVVVNCAALSVP---RVCENDPDSAMSINVPSSLVNWLSSFTE---NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVY  151 (320)
Q Consensus        78 d~Vih~a~~~~~---~~~~~~~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y  151 (320)
                      |++||+||....   ....++++..+++|+.+++ .+++++..   .+..++|++||...+.+.          .....|
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~~~~~Y  150 (261)
T PRK08265         82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAA-MLAQAAHPHLARGGGAIVNFTSISAKFAQ----------TGRWLY  150 (261)
T ss_pred             CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHH-HHHHHHHHHHhcCCcEEEEECchhhccCC----------CCCchh
Confidence            999999997532   1223345677889999885 66665542   233489999998764322          125579


Q ss_pred             HHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHH
Q 020880          152 GKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI  224 (320)
Q Consensus       152 ~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  224 (320)
                      +.+|...+.+.+.+       +.++.+++|+.+..+-........ . ...........+       ...+...+|+|++
T Consensus       151 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~-~-~~~~~~~~~~~p-------~~r~~~p~dva~~  221 (261)
T PRK08265        151 PASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGD-R-AKADRVAAPFHL-------LGRVGDPEEVAQV  221 (261)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccc-h-hHHHHhhcccCC-------CCCccCHHHHHHH
Confidence            99999999987764       345677999887554211000000 0 000000000001       1224678999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCC
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +.+++.....  ...+..+.+.+|.
T Consensus       222 ~~~l~s~~~~--~~tG~~i~vdgg~  244 (261)
T PRK08265        222 VAFLCSDAAS--FVTGADYAVDGGY  244 (261)
T ss_pred             HHHHcCcccc--CccCcEEEECCCe
Confidence            9999875321  2234577777663

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.83  E-value=8.4e-20  Score=153.97  Aligned_cols=192  Identities=18%  Similarity=0.209  Sum_probs=140.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCC--cceEEEeeCCCcccHHHHHHH----hCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH--SFVFFDVDLKSGSGFDAVALK----FGQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~~~~~~~~----~~~   76 (320)
                      +|+|+||||+|+||++++++|+++|   ++|+++.|+.+....+.+.+..  ++.++.+|++|++++.++++.    ++.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQG---ATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999999999   8999999987665554443321  577899999999998777654    346


Q ss_pred             CCEEEECCCccCccc-----cccCchhhhhccccccHHHHHh----hhhhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           77 PDVVVNCAALSVPRV-----CENDPDSAMSINVPSSLVNWLS----SFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~~~l~----~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +|++||+||......     ...+++..+++|+.+++ ++++    .+++.+..++|++||...+.+.          ..
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~-~l~~~~l~~~~~~~~~~iv~isS~~~~~~~----------~~  147 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMV-ATFQPFIAPMRAARRGTLVGIASVAGVRGL----------PG  147 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHH-HHHHHHHHHHHhcCCCEEEEEechhhcCCC----------CC
Confidence            899999999754321     12345678899999985 6544    5556666799999997765322          12


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+.+.+       +.+++++||+.+.++....                .....+       .++..+|
T Consensus       148 ~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~----------------~~~~~~-------~~~~~~~  204 (257)
T PRK07024        148 AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH----------------NPYPMP-------FLMDADR  204 (257)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc----------------CCCCCC-------CccCHHH
Confidence            457999999999987654       4578899999998763210                000000       1367899


Q ss_pred             HHHHHHHHHhh
Q 020880          221 VVKIILALTNR  231 (320)
Q Consensus       221 ~a~~~~~~~~~  231 (320)
                      +++.++.++.+
T Consensus       205 ~a~~~~~~l~~  215 (257)
T PRK07024        205 FAARAARAIAR  215 (257)
T ss_pred             HHHHHHHHHhC
Confidence            99999999976

>PRK08017 oxidoreductase; Provisional

Probab=99.83  E-value=1.1e-19  Score=153.13  Aligned_cols=202  Identities=16%  Similarity=0.092  Sum_probs=139.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh-----CCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF-----GQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~   77 (320)
                      +++|+||||+|+||+++++.|+++|   ++|++..|+.++.+....   .++.++.+|++|.+++.++++..     +.+
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g---~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~   75 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRG---YRVLAACRKPDDVARMNS---LGFTGILLDLDDPESVERAADEVIALTDNRL   75 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHhHHHHh---CCCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            4689999999999999999999999   889999998765443322   24677899999998877766543     468


Q ss_pred             CEEEECCCccCccc----cccCchhhhhccccccHHH----HHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPRV----CENDPDSAMSINVPSSLVN----WLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~----~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |.++|+||......    +..+.+..++.|+.++. +    +++.+++.+.+++|++||...+.+.          ...+
T Consensus        76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~-~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------~~~~  144 (256)
T PRK08017         76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTH-QLTMLLLPAMLPHGEGRIVMTSSVMGLIST----------PGRG  144 (256)
T ss_pred             eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHhhcCCCEEEEEcCcccccCC----------CCcc
Confidence            99999998653221    22234577899998874 4    4676777777799999997554322          2356


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...|.+.+.+       +.+++++||+.+..+-...          +.. .....+....+...+.+++++|++
T Consensus       145 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~----------~~~-~~~~~~~~~~~~~~~~~~~~~d~a  213 (256)
T PRK08017        145 AYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDN----------VNQ-TQSDKPVENPGIAARFTLGPEAVV  213 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhc----------ccc-hhhccchhhhHHHhhcCCCHHHHH
Confidence            8999999999876542       4567889997764331100          000 000111111122345679999999


Q ss_pred             HHHHHHHhhh
Q 020880          223 KIILALTNRW  232 (320)
Q Consensus       223 ~~~~~~~~~~  232 (320)
                      +++..+++++
T Consensus       214 ~~~~~~~~~~  223 (256)
T PRK08017        214 PKLRHALESP  223 (256)
T ss_pred             HHHHHHHhCC
Confidence            9999999874

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.9e-19  Score=150.97  Aligned_cols=226  Identities=13%  Similarity=0.096  Sum_probs=149.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHH---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      .+|+++||||+|.||.++++.|+++|   ++|+++.|+++..+...+.+     +.++.++.+|++|++++.++++.   
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G---~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREG---AAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            36899999999999999999999999   89999999876655444332     34577899999999988777653   


Q ss_pred             -hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCC
Q 020880           74 -FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                       ++++|++||+||.....    ....+++..+++|+.+++ .+++++.    +.+..++|++||...+...         
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  152 (260)
T PRK07063         83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAW-NGCRAVLPGMVERGRGSIVNIASTHAFKII---------  152 (260)
T ss_pred             HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHH-HHHHHHHHHHHhhCCeEEEEECChhhccCC---------
Confidence             46899999999975322    122345677889999985 6666653    3444589999998765432         


Q ss_pred             CCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       .+...|+.+|...+.+.+.+.       .++..++|+.+-.+-......................+.       ..+..
T Consensus       153 -~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~r~~~  224 (260)
T PRK07063        153 -PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM-------KRIGR  224 (260)
T ss_pred             -CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC-------CCCCC
Confidence             235589999999999887652       356678998875442110000000000011111111111       12567


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      .+|+|++++.++.....  -..+..+.+.+|..
T Consensus       225 ~~~va~~~~fl~s~~~~--~itG~~i~vdgg~~  255 (260)
T PRK07063        225 PEEVAMTAVFLASDEAP--FINATCITIDGGRS  255 (260)
T ss_pred             HHHHHHHHHHHcCcccc--ccCCcEEEECCCee
Confidence            89999999999865322  12345777776643

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=9.1e-19  Score=147.51  Aligned_cols=223  Identities=14%  Similarity=0.150  Sum_probs=146.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~d   78 (320)
                      +|+++||||+|.||++++++|+++|   ++|+...|+.+........  .++.++.+|++|++++.++++.    ++++|
T Consensus         7 ~k~~lItGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~~~~~l~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (255)
T PRK06463          7 GKVALITGGTRGIGRAIAEAFLREG---AKVAVLYNSAENEAKELRE--KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVD   81 (255)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCcHHHHHHHHh--CCCeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999   7888776664433222221  2467899999999998877754    35799


Q ss_pred             EEEECCCccCcc----ccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchH
Q 020880           79 VVVNCAALSVPR----VCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVY  151 (320)
Q Consensus        79 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y  151 (320)
                      +|||+||.....    ....+++..+++|+.+++   ..+++.+++.+..++|++||...++..         ..+...|
T Consensus        82 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~---------~~~~~~Y  152 (255)
T PRK06463         82 VLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA---------AEGTTFY  152 (255)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC---------CCCccHh
Confidence            999999975321    122345677899999964   244555554555699999999877521         1234679


Q ss_pred             HHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHH
Q 020880          152 GKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI  224 (320)
Q Consensus       152 ~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  224 (320)
                      +.+|...+.+++.+.       .++.+++|+.+--+-........... .+........+       ...+...+|+|++
T Consensus       153 ~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~va~~  224 (255)
T PRK06463        153 AITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAE-KLRELFRNKTV-------LKTTGKPEDIANI  224 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchH-HHHHHHHhCCC-------cCCCcCHHHHHHH
Confidence            999999999887653       45677899887433211000000000 11111111212       2235789999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCC
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ++.++.....  ...+..+.+.+|.
T Consensus       225 ~~~l~s~~~~--~~~G~~~~~dgg~  247 (255)
T PRK06463        225 VLFLASDDAR--YITGQVIVADGGR  247 (255)
T ss_pred             HHHHcChhhc--CCCCCEEEECCCe
Confidence            9999875432  1234578887764

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.2e-18  Score=148.02  Aligned_cols=202  Identities=16%  Similarity=0.155  Sum_probs=140.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----hCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----FGQ   76 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~~~   76 (320)
                      |+|+||||||+||++++++|+++|   ++|++..|+.+........   .+..+.++.+|++|++++.++++.    +++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   77 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREG---WRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGG   77 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999   8899999987665544332   235677899999999988877753    347


Q ss_pred             CCEEEECCCccCccccc----cCchhhhhccccccHHHHH----hhhhhccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           77 PDVVVNCAALSVPRVCE----NDPDSAMSINVPSSLVNWL----SSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~~~l----~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      +|+|||+||........    .+.+..+++|+.+++ .+.    ..+++.+..++|++||...+.+.          ...
T Consensus        78 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----------~~~  146 (270)
T PRK05650         78 IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVV-KGCKAFLPLFKRQKSGRIVNIASMAGLMQG----------PAM  146 (270)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHH-HHHHHHHHHHHhCCCCEEEEECChhhcCCC----------CCc
Confidence            99999999976442221    233456789988875 544    44556666799999998776532          235


Q ss_pred             chHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCC-hHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          149 NVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSL-PIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      +.|+.+|...+.+.+.+       +.++.+++|+.+..+.......... ....+....            ...+++++|
T Consensus       147 ~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~  214 (270)
T PRK05650        147 SSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLL------------EKSPITAAD  214 (270)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHh------------hcCCCCHHH
Confidence            68999999977765543       3467889999998764321111000 001111111            123588999


Q ss_pred             HHHHHHHHHhh
Q 020880          221 VVKIILALTNR  231 (320)
Q Consensus       221 ~a~~~~~~~~~  231 (320)
                      +|+.++.++++
T Consensus       215 vA~~i~~~l~~  225 (270)
T PRK05650        215 IADYIYQQVAK  225 (270)
T ss_pred             HHHHHHHHHhC
Confidence            99999999986

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.83  E-value=4.5e-19  Score=149.44  Aligned_cols=220  Identities=11%  Similarity=0.052  Sum_probs=151.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+|+|+||||+|+||++++++|+++|   ++|+++.|+++........   .+..+.++.+|++|++++.++++.    +
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAG---AHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH   86 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcC---CeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999   8999999986554443332   234577899999999988777654    3


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|+|||+||.....    ....+++..+++|+.+++ .+++.+    .+.+.+++|++||...+.+..          
T Consensus        87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------  155 (256)
T PRK06124         87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPI-LLSRLAAQRMKRQGYGRIIAITSIAGQVARA----------  155 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCcEEEEEeechhccCCC----------
Confidence            5789999999975432    122345567889999885 666544    345667999999987653221          


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      ....|+.+|...+.+++.+       +.++..++|+.+.++........   .. +...+....+       ...+++.+
T Consensus       156 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~---~~-~~~~~~~~~~-------~~~~~~~~  224 (256)
T PRK06124        156 GDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAAD---PA-VGPWLAQRTP-------LGRWGRPE  224 (256)
T ss_pred             CccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccC---hH-HHHHHHhcCC-------CCCCCCHH
Confidence            2468999999999877654       34678899999988753211000   11 1111211111       12478999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      |++++++.++..+...  ..+..+.+.++
T Consensus       225 ~~a~~~~~l~~~~~~~--~~G~~i~~dgg  251 (256)
T PRK06124        225 EIAGAAVFLASPAASY--VNGHVLAVDGG  251 (256)
T ss_pred             HHHHHHHHHcCcccCC--cCCCEEEECCC
Confidence            9999999999764321  12446666654

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.83  E-value=5.4e-19  Score=154.85  Aligned_cols=250  Identities=22%  Similarity=0.205  Sum_probs=172.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh---hhhhhh--------C-------CCcceEEEeeCCCc
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP---QLLLDA--------L-------PHSFVFFDVDLKSG   64 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~---~~~~~~--------~-------~~~~~~~~~Dl~d~   64 (320)
                      .|+|||||||||+|..+++.|+..-.+|.+++.+.|.+...   +++...        +       ..++..+.||+.++
T Consensus        12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~   91 (467)
T KOG1221|consen   12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEP   91 (467)
T ss_pred             CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCc
Confidence            68999999999999999999998876667899999975432   222111        0       14566788999876


Q ss_pred             cc------HHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeechhhhccc--
Q 020880           65 SG------FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTDQVYEGV--  135 (320)
Q Consensus        65 ~~------~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~~vy~~~--  135 (320)
                      +.      +....+   ++|+|||+||....+   +.-.....+|+.|+. ++++.|++. +.+-+||+||+++-...  
T Consensus        92 ~LGis~~D~~~l~~---eV~ivih~AAtvrFd---e~l~~al~iNt~Gt~-~~l~lak~~~~l~~~vhVSTAy~n~~~~~  164 (467)
T KOG1221|consen   92 DLGISESDLRTLAD---EVNIVIHSAATVRFD---EPLDVALGINTRGTR-NVLQLAKEMVKLKALVHVSTAYSNCNVGH  164 (467)
T ss_pred             ccCCChHHHHHHHh---cCCEEEEeeeeeccc---hhhhhhhhhhhHhHH-HHHHHHHHhhhhheEEEeehhheeccccc
Confidence            52      333333   899999999987554   234667889999995 999999886 46899999999876311  


Q ss_pred             --CCC--Ccc------------cC---------C---CCCcchHHHHHHHHHHHHHHHc--CCeeEEeecccccCCCCCC
Q 020880          136 --KSF--YKE------------ED---------E---IAPVNVYGKSKVAAEKFIYEKC--SNFAILRSSIIYGPQTISP  185 (320)
Q Consensus       136 --~~~--~~E------------~~---------~---~~p~~~Y~~sK~~~e~~~~~~~--~~~~ilR~~~v~G~~~~~~  185 (320)
                        +.+  ..|            +.         +   ....+.|..+|..+|.++.+..  .+.+|+||++|......+.
T Consensus       165 i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~  244 (467)
T KOG1221|consen  165 IEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPF  244 (467)
T ss_pred             ccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCC
Confidence              111  111            10         0   1235679999999999998874  5789999999998765322


Q ss_pred             CCCCChHHHHHHH---------HhcCCceEee--cCcccCceeHHHHHHHHHHHHhhhhcccc-ccCceeEecCCC--Cc
Q 020880          186 VPKSLPIQWIDSV---------LSKGEKVEFF--HDECRCPVYVRDVVKIILALTNRWLSEDK-QMQLLLNVGGPD--RV  251 (320)
Q Consensus       186 ~~~~~~~~~~~~~---------~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~~n~~~~~--~~  251 (320)
                      .      .|+...         ..+|.--.+.  .+...++|.++.++.+++.+.-....... ....+||++++.  ++
T Consensus       245 p------GWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~  318 (467)
T KOG1221|consen  245 P------GWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPV  318 (467)
T ss_pred             C------CccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcc
Confidence            1      222211         1122222222  34578999999999999976633221111 225599999875  58


Q ss_pred             CHHHHHHHHHHHhC
Q 020880          252 SRVQMAEVVAEIRG  265 (320)
Q Consensus       252 s~~e~~~~i~~~~~  265 (320)
                      ++.++.+...+...
T Consensus       319 t~~~~~e~~~~~~~  332 (467)
T KOG1221|consen  319 TWGDFIELALRYFE  332 (467)
T ss_pred             cHHHHHHHHHHhcc
Confidence            99999999888765

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=4.3e-19  Score=149.28  Aligned_cols=215  Identities=13%  Similarity=0.122  Sum_probs=148.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHHh----C
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALKF----G   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----~   75 (320)
                      .++++||||+|+||+++++.|+++|   +.|+...|+.++.......   .+..+.++.+|++|.+++.++++.+    +
T Consensus         5 ~~~~lItG~~g~iG~~~a~~l~~~G---~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          5 DKVIVITGGAQGLGRAMAEYLAQKG---AKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999999   7899999886554433322   2346778899999998887777654    4


Q ss_pred             CCCEEEECCCccCcc-------------ccccCchhhhhccccccHHHHHhhh----hhc-cCceEEEeechhhhcccCC
Q 020880           76 QPDVVVNCAALSVPR-------------VCENDPDSAMSINVPSSLVNWLSSF----TEN-KENLLIHLSTDQVYEGVKS  137 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~-------------~~~~~~~~~~~~n~~~~~~~~l~~~----~~~-~~~~~v~~Ss~~vy~~~~~  137 (320)
                      ++|+|||+||.....             ....+....+++|+.+++ .+.+.+    .+. ...++|++||...|+..  
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~--  158 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVF-LCGREAAAKMIESGSKGVIINISSIARAGNM--  158 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHhcCCCeEEEEEccccccCCC--
Confidence            689999999964321             112234566788998875 444433    222 22479999998776532  


Q ss_pred             CCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC
Q 020880          138 FYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD  210 (320)
Q Consensus       138 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (320)
                               +...|+.+|...+.+++.+       +.+++.++|+.+.++....     ........ .....+.     
T Consensus       159 ---------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~-----~~~~~~~~-~~~~~~~-----  218 (253)
T PRK08217        159 ---------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA-----MKPEALER-LEKMIPV-----  218 (253)
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc-----cCHHHHHH-HHhcCCc-----
Confidence                     3568999999999887654       3567889999998765321     11122222 1122222     


Q ss_pred             cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                        ..+.+++|+|+++..++...    ...+.+|+++++.
T Consensus       219 --~~~~~~~~~a~~~~~l~~~~----~~~g~~~~~~gg~  251 (253)
T PRK08217        219 --GRLGEPEEIAHTVRFIIEND----YVTGRVLEIDGGL  251 (253)
T ss_pred             --CCCcCHHHHHHHHHHHHcCC----CcCCcEEEeCCCc
Confidence              23678999999999998642    2245699998764

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.3e-19  Score=154.51  Aligned_cols=162  Identities=15%  Similarity=0.155  Sum_probs=125.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh-----CCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF-----GQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~   77 (320)
                      +|+|+||||+|+||++++++|.++|   ++|++.+|+++....+..   ..+.++.+|++|.+++..+++.+     +++
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G---~~Vi~~~r~~~~~~~l~~---~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i   77 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDG---WRVFATCRKEEDVAALEA---EGLEAFQLDYAEPESIAALVAQVLELSGGRL   77 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHH---CCceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence            5789999999999999999999999   899999998766554433   25778899999999888777654     468


Q ss_pred             CEEEECCCccCcccc----ccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           78 DVVVNCAALSVPRVC----ENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        78 d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      |+|||+||.......    ..+.+..+++|+.+.+   ..+++.+++.+..+||++||...+.+          ..+...
T Consensus        78 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~----------~~~~~~  147 (277)
T PRK05993         78 DALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP----------MKYRGA  147 (277)
T ss_pred             cEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC----------CCccch
Confidence            999999987644321    1233567889998843   26777777777779999999866532          224568


Q ss_pred             HHHHHHHHHHHHHHH-------cCCeeEEeecccccC
Q 020880          151 YGKSKVAAEKFIYEK-------CSNFAILRSSIIYGP  180 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~  180 (320)
                      |+.+|...|.+.+.+       +.++.+++||.+-.+
T Consensus       148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR  184 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence            999999999987653       457889999988544

>PRK08643 acetoin reductase; Validated

Probab=99.83  E-value=5e-19  Score=149.20  Aligned_cols=224  Identities=19%  Similarity=0.159  Sum_probs=146.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      +|+++||||+|+||+++++.|+++|   ++|+++.|+.+........+   +..+.++.+|++|++++.++++.    ++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDG---FKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999   89999999876554443322   34567789999999988777654    35


Q ss_pred             CCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hcc-CceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENK-ENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|+|||+||......    ...+.+..+++|+.+++ .+++.+.    +.+ ..++|++||...+.+.          .
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~  147 (256)
T PRK08643         79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVI-WGIQAAQEAFKKLGHGGKIINATSQAGVVGN----------P  147 (256)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCCEEEEECccccccCC----------C
Confidence            7999999998753221    12234567889999875 5555543    322 2489999997654321          1


Q ss_pred             CcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCC-----CCChHHHHHHHHhcCCceEeecCcccC
Q 020880          147 PVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVP-----KSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                      +...|+.+|...+.+++.+.       .++..++|+.+..+.......     ......+.........+       ...
T Consensus       148 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~  220 (256)
T PRK08643        148 ELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDIT-------LGR  220 (256)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCC-------CCC
Confidence            25679999999988776542       457789999887653210000     00000010000100000       123


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +...+|+|.++..++.....  ...+.++.+.+|.
T Consensus       221 ~~~~~~va~~~~~L~~~~~~--~~~G~~i~vdgg~  253 (256)
T PRK08643        221 LSEPEDVANCVSFLAGPDSD--YITGQTIIVDGGM  253 (256)
T ss_pred             CcCHHHHHHHHHHHhCcccc--CccCcEEEeCCCe
Confidence            56899999999998865422  1234577776654

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.83  E-value=5.4e-19  Score=147.37  Aligned_cols=213  Identities=17%  Similarity=0.159  Sum_probs=145.0

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-Chhhhhh---hCCCcceEEEeeCCCcccHHHHHHHh----CCC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-LPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALKF----GQP   77 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~~   77 (320)
                      |+|||++|+||++++++|+++|   ++|+++.|+.. ....+..   ..+..+.++.+|++|++++.++++.+    +.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEG---AKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPI   77 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999   88999988752 2222222   22335678999999999888877543    568


Q ss_pred             CEEEECCCccCc----cccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechh-hhcccCCCCcccCCCCCc
Q 020880           78 DVVVNCAALSVP----RVCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQ-VYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        78 d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~-vy~~~~~~~~E~~~~~p~  148 (320)
                      |+|||+||....    ......++..+++|+.+++ ++++++.+    .+.+++|++||.. +++..           +.
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~-----------~~  145 (239)
T TIGR01830        78 DILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVF-NLTQAVLRIMIKQRSGRIINISSVVGLMGNA-----------GQ  145 (239)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCeEEEEECCccccCCCC-----------CC
Confidence            999999997542    1223456778899999985 77777754    4456999999965 44421           35


Q ss_pred             chHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          149 NVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      ..|+.+|...+.+++.+       +..+.++||+.+.++....     .. ..+........+.       ..+.+++|+
T Consensus       146 ~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~-----~~-~~~~~~~~~~~~~-------~~~~~~~~~  212 (239)
T TIGR01830       146 ANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDK-----LS-EKVKKKILSQIPL-------GRFGTPEEV  212 (239)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhh-----cC-hHHHHHHHhcCCc-------CCCcCHHHH
Confidence            67999999888866553       3467889998886543211     11 1111112122221       236789999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCC
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +++++.++.....  ...+.+||++++
T Consensus       213 a~~~~~~~~~~~~--~~~g~~~~~~~g  237 (239)
T TIGR01830       213 ANAVAFLASDEAS--YITGQVIHVDGG  237 (239)
T ss_pred             HHHHHHHhCcccC--CcCCCEEEeCCC
Confidence            9999988855322  234569999764

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=6.9e-19  Score=148.05  Aligned_cols=218  Identities=17%  Similarity=0.226  Sum_probs=146.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC-CCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----CC-
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----GQ-   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~-   76 (320)
                      +|+++||||+|+||+++++.|+++|   ++|+...++ .+....+....+..+.++.+|++|++++.++++..    +. 
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G---~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   81 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREG---ARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKP   81 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCC---CeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4799999999999999999999999   788776554 33333443434456778999999999888777643    34 


Q ss_pred             CCEEEECCCccCc----------cccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCccc
Q 020880           77 PDVVVNCAALSVP----------RVCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        77 ~d~Vih~a~~~~~----------~~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                      +|++||+|+....          ..+..+....+++|+.+++ ++++++.    +.+..++|++||.....         
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~g~iv~iss~~~~~---------  151 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL-NTIQAALPGMREQGFGRIINIGTNLFQN---------  151 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHH-HHHHHHHHHHHhcCCeEEEEECCccccC---------
Confidence            9999999986311          1112234567899999986 7777774    34446899999865332         


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                       +..|...|+.+|...|.+++.+.       .++..++||.+--+....    ....... ..+....++       ..+
T Consensus       152 -~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~----~~~~~~~-~~~~~~~~~-------~~~  218 (253)
T PRK08642        152 -PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASA----ATPDEVF-DLIAATTPL-------RKV  218 (253)
T ss_pred             -CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhc----cCCHHHH-HHHHhcCCc-------CCC
Confidence             23356689999999999888753       245668888885542111    1111111 112122221       247


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      .+.+|+++++..++.....  ...+..+.+.++
T Consensus       219 ~~~~~va~~~~~l~~~~~~--~~~G~~~~vdgg  249 (253)
T PRK08642        219 TTPQEFADAVLFFASPWAR--AVTGQNLVVDGG  249 (253)
T ss_pred             CCHHHHHHHHHHHcCchhc--CccCCEEEeCCC
Confidence            8999999999999975322  223557777765

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1e-18  Score=146.36  Aligned_cols=219  Identities=18%  Similarity=0.158  Sum_probs=146.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhh---hhCCCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLL---DALPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      ++++++||||+|+||+++++.|+++|   ++|+...|+.+. ...+.   ...+..+.++.+|++|++++.++++.    
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADG---FAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999999   788777776432 22221   22245678899999999988777764    


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++++|+|||+||.....    ....+.+..+++|+.+++ ++++++.+.  ...++|++||...+.+.          .+
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------~~  149 (245)
T PRK12937         81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAF-VVLREAARHLGQGGRIINLSTSVIALPL----------PG  149 (245)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHH-HHHHHHHHHhccCcEEEEEeeccccCCC----------CC
Confidence            35799999999975421    122345567889999986 777776542  22489999987665322          23


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      .+.|+.+|...+.+++.+       +..+.+++|+.+-.+-...    ......+.. +.+..++.       .+.+++|
T Consensus       150 ~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~----~~~~~~~~~-~~~~~~~~-------~~~~~~d  217 (245)
T PRK12937        150 YGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFN----GKSAEQIDQ-LAGLAPLE-------RLGTPEE  217 (245)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcc----cCCHHHHHH-HHhcCCCC-------CCCCHHH
Confidence            568999999999988764       2356778998776543110    001112222 21222221       2568899


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +++++..++..+..  ...+.++++.++
T Consensus       218 ~a~~~~~l~~~~~~--~~~g~~~~~~~g  243 (245)
T PRK12937        218 IAAAVAFLAGPDGA--WVNGQVLRVNGG  243 (245)
T ss_pred             HHHHHHHHcCcccc--CccccEEEeCCC
Confidence            99999998865322  123557888754

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.83  E-value=6e-19  Score=148.51  Aligned_cols=221  Identities=15%  Similarity=0.129  Sum_probs=150.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .++++|||||+|.||.+++++|+++|   ++|++..|+.++.....+.+   +..+.++.+|++|++++.++++.    +
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G---~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYG---AEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcC---CEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            36799999999999999999999999   89999999876554443332   23566788999999988777654    3


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|+|||+||.....    ....+++..+++|+.+++ .+++++..    .+..+||++||.....+          ..
T Consensus        85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------~~  153 (254)
T PRK08085         85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVF-LVSQAVARYMVKRQAGKIINICSMQSELG----------RD  153 (254)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCcEEEEEccchhccC----------CC
Confidence            5789999999975321    222345678899999985 66666543    44468999999764321          12


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+++.+       +.++.+++|+.+..+-.......   ..+. ..+....++       ..+...+
T Consensus       154 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~---~~~~-~~~~~~~p~-------~~~~~~~  222 (254)
T PRK08085        154 TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED---EAFT-AWLCKRTPA-------ARWGDPQ  222 (254)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC---HHHH-HHHHhcCCC-------CCCcCHH
Confidence            3568999999999988765       34667899999987643211100   0111 112122222       2367899


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+++++..++.....  ...+.++.+.+|.
T Consensus       223 ~va~~~~~l~~~~~~--~i~G~~i~~dgg~  250 (254)
T PRK08085        223 ELIGAAVFLSSKASD--FVNGHLLFVDGGM  250 (254)
T ss_pred             HHHHHHHHHhCcccc--CCcCCEEEECCCe
Confidence            999999988875321  1224466666553

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1e-18  Score=147.25  Aligned_cols=220  Identities=15%  Similarity=0.093  Sum_probs=146.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----CC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----GQ   76 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~   76 (320)
                      |++++|+||||+|+||.+++++|+++|   ++|+++.|+........+...  ..++.+|++|++++.++++..    ++
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G---~~v~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEG---ATVVVGDIDPEAGKAAADEVG--GLFVPTDVTDEDAVNALFDTAAETYGS   79 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHcC--CcEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999   899999998665544444332  256899999999888777643    57


Q ss_pred             CCEEEECCCccCcc------ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechh-hhcccCCCCcccCCC
Q 020880           77 PDVVVNCAALSVPR------VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQ-VYEGVKSFYKEEDEI  145 (320)
Q Consensus        77 ~d~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~-vy~~~~~~~~E~~~~  145 (320)
                      +|+|||+||...+.      .+....+..+++|+.+++ .+++.+    ++.+..++|++||.. +++..          
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~----------  148 (255)
T PRK06057         80 VDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVY-LCCKAALPHMVRQGKGSIINTASFVAVMGSA----------  148 (255)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHH-HHHHHHHHHHHHhCCcEEEEEcchhhccCCC----------
Confidence            89999999875321      112235677889999875 555544    344455899998864 45431          


Q ss_pred             CCcchHHHHHHHHHHHHHH----H---cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYE----K---CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~----~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+.+.    +   +.++.++||+.+.++........ .. ......+.   .++     ...+..+
T Consensus       149 ~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~-~~~~~~~~---~~~-----~~~~~~~  218 (255)
T PRK06057        149 TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAK-DP-ERAARRLV---HVP-----MGRFAEP  218 (255)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccC-CH-HHHHHHHh---cCC-----CCCCcCH
Confidence            1345799999877766553    2   45678899999987753211110 11 11111110   111     1247889


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +|+++++..++.....  ...+..+.+.++
T Consensus       219 ~~~a~~~~~l~~~~~~--~~~g~~~~~~~g  246 (255)
T PRK06057        219 EEIAAAVAFLASDDAS--FITASTFLVDGG  246 (255)
T ss_pred             HHHHHHHHHHhCcccc--CccCcEEEECCC
Confidence            9999999888865322  222446666654

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.82  E-value=4.7e-19  Score=149.69  Aligned_cols=200  Identities=16%  Similarity=0.098  Sum_probs=140.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC-CcceEEEeeCCCcccHHHHHHH-----hCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLKSGSGFDAVALK-----FGQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~-----~~~   76 (320)
                      ||++|||||||+||++++++|+++|   ++|+++.|+.++.+.+....+ ..+.++.+|++|.+++.++++.     .++
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEG---WRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999   899999998776655544432 4678899999999988877653     346


Q ss_pred             CCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           77 PDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      +|+|||+||......    +..+.+..+++|+.+++ ++++++.    +.+..++|++||...+.+..          ..
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~  146 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVL-NGAHAALPYLKATPGARVINTSSASAIYGQP----------GL  146 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhCCCCEEEEeCchhhCcCCC----------Cc
Confidence            899999999864322    22345678899999986 7777664    34456899999976543221          25


Q ss_pred             chHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          149 NVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      ..|+.+|...+.+.+.+       +.++.+++|+.+-.+.....  ..   ........ .         ..-.+..+|+
T Consensus       147 ~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~--~~---~~~~~~~~-~---------~~~~~~~~~v  211 (260)
T PRK08267        147 AVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGT--SN---EVDAGSTK-R---------LGVRLTPEDV  211 (260)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccc--cc---hhhhhhHh-h---------ccCCCCHHHH
Confidence            58999999999877764       24667889988854322100  00   00000010 0         0113567999


Q ss_pred             HHHHHHHHhh
Q 020880          222 VKIILALTNR  231 (320)
Q Consensus       222 a~~~~~~~~~  231 (320)
                      |++++.+++.
T Consensus       212 a~~~~~~~~~  221 (260)
T PRK08267        212 AEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHhC
Confidence            9999999865

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.82  E-value=7.4e-19  Score=147.81  Aligned_cols=220  Identities=15%  Similarity=0.065  Sum_probs=147.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+++++||||+|+||.+++++|+++|   ++|+++.|+.+..+.+.+..   +..+.++.+|+.|.+++..+++.    +
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G---~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQG---AHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999   89999999866554443332   34567789999999987766653    3


Q ss_pred             CCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +.+|+|||+||....     .....+.+..+++|+.+.+ .+++++    ++.+..++|++||...+.+          .
T Consensus        84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~  152 (252)
T PRK07035         84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYF-FMSVEAGKLMKEQGGGSIVNVASVNGVSP----------G  152 (252)
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhCCCcEEEEECchhhcCC----------C
Confidence            579999999986421     1122334567889999985 555554    4555569999999765432          1


Q ss_pred             CCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+++.+.       .++..+.|+.+-.+-.......   ...... .....+       ...+...
T Consensus       153 ~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~---~~~~~~-~~~~~~-------~~~~~~~  221 (252)
T PRK07035        153 DFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN---DAILKQ-ALAHIP-------LRRHAEP  221 (252)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC---HHHHHH-HHccCC-------CCCcCCH
Confidence            245689999999999888753       4567799988854321110000   011111 111111       1235678


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +|+|+++..++......  ..+.++++.++
T Consensus       222 ~~va~~~~~l~~~~~~~--~~g~~~~~dgg  249 (252)
T PRK07035        222 SEMAGAVLYLASDASSY--TTGECLNVDGG  249 (252)
T ss_pred             HHHHHHHHHHhCccccC--ccCCEEEeCCC
Confidence            99999999988764321  23457777654

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.82  E-value=7.8e-19  Score=149.82  Aligned_cols=222  Identities=15%  Similarity=0.177  Sum_probs=149.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      +|+++||||+|+||++++++|+++|   ++|+++.|+.+....+.+.+   +.++.++.+|++|++++.++++.    ++
T Consensus        10 ~k~vlVtGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277         10 GKVAVITGGGGVLGGAMAKELARAG---AKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999999   88999999865544443322   34577899999999988776653    46


Q ss_pred             CCCEEEECCCccCccc-------------------cccCchhhhhccccccHHHHH----hhhhhccCceEEEeechhhh
Q 020880           76 QPDVVVNCAALSVPRV-------------------CENDPDSAMSINVPSSLVNWL----SSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~-------------------~~~~~~~~~~~n~~~~~~~~l----~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      ++|+|||+||...+..                   ...+++..+++|+.+++ .++    +.+.+.+..++|++||...+
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~g~ii~isS~~~~  165 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTL-LPTQVFAKDMVGRKGGNIINISSMNAF  165 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHhcCCcEEEEEccchhc
Confidence            8999999999653321                   12335677889998875 443    44444555699999999887


Q ss_pred             cccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCC--CCChHHHHHHHHhcCC
Q 020880          133 EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVP--KSLPIQWIDSVLSKGE  203 (320)
Q Consensus       133 ~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~  203 (320)
                      .+.          .+...|+.+|...+.+++.+       +.++.+++|+.+..+.......  .......... +....
T Consensus       166 ~~~----------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~  234 (278)
T PRK08277        166 TPL----------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANK-ILAHT  234 (278)
T ss_pred             CCC----------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHH-HhccC
Confidence            532          23567999999999988764       3456789999998774321100  0000011111 11111


Q ss_pred             ceEeecCcccCceeHHHHHHHHHHHHhh-hhccccccCceeEecCC
Q 020880          204 KVEFFHDECRCPVYVRDVVKIILALTNR-WLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       204 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~-~~~~~~~~~~~~n~~~~  248 (320)
                      +       ...+...+|+|++++.++.. ...  -..+..+.+.+|
T Consensus       235 p-------~~r~~~~~dva~~~~~l~s~~~~~--~~tG~~i~vdgG  271 (278)
T PRK08277        235 P-------MGRFGKPEELLGTLLWLADEKASS--FVTGVVLPVDGG  271 (278)
T ss_pred             C-------ccCCCCHHHHHHHHHHHcCccccC--CcCCCEEEECCC
Confidence            1       12356789999999998765 221  123447777665

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.82  E-value=9.7e-19  Score=146.43  Aligned_cols=218  Identities=15%  Similarity=0.142  Sum_probs=149.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      +++++||||+|+||+++++.|+++|   ++|+.+.|+... ...+...   .+..+.++.+|++|.+++.++++.    +
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g---~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDG---YRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE   78 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999   899999888532 2222221   134578899999999988777654    3


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHH----HhhhhhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNW----LSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~----l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +.+|+|||+||.....    ....+++..++.|+.+++ ++    ++.+++.+..+||++||...+.+..          
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~----------  147 (245)
T PRK12824         79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVF-NVTQPLFAAMCEQGYGRIINISSVNGLKGQF----------  147 (245)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHhCCeEEEEECChhhccCCC----------
Confidence            5799999999975321    122345677889999875 65    4455556667999999987764321          


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+++.+       +.++.+++|+.+.++....     ........ +....+       ...+...+
T Consensus       148 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~-----~~~~~~~~-~~~~~~-------~~~~~~~~  214 (245)
T PRK12824        148 GQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ-----MGPEVLQS-IVNQIP-------MKRLGTPE  214 (245)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh-----cCHHHHHH-HHhcCC-------CCCCCCHH
Confidence            2457999999888877654       3466789999998764321     11112211 112222       12356789


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+++++..++.....  ...+..+++.+|.
T Consensus       215 ~va~~~~~l~~~~~~--~~~G~~~~~~~g~  242 (245)
T PRK12824        215 EIAAAVAFLVSEAAG--FITGETISINGGL  242 (245)
T ss_pred             HHHHHHHHHcCcccc--CccCcEEEECCCe
Confidence            999999888855321  2345688888774

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.82  E-value=1.1e-18  Score=147.24  Aligned_cols=219  Identities=21%  Similarity=0.192  Sum_probs=148.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhh---hhhCCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL---LDALPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+++||||||+|.||.+++++|++.|   +.|++..|+ +..+.+   ....+..+.++.+|+++.+++.++++.    +
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAG---ADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            36899999999999999999999999   888888887 332222   222345678899999999988776653    3


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|++||+||.....    ....+++..+++|+.+.+ .+.+++    ++.+..++|++||...+.+..          
T Consensus        90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  158 (258)
T PRK06935         90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVY-HLSQAVAKVMAKQGSGKIINIASMLSFQGGK----------  158 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHH-HHHHHHHHHHHhcCCeEEEEECCHHhccCCC----------
Confidence            5789999999975431    122345677889999874 555444    445556999999998764322          


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      ....|+.+|...+.+++.+       +.++.+++|+.+..+........   ........ ...+       ...+...+
T Consensus       159 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~---~~~~~~~~-~~~~-------~~~~~~~~  227 (258)
T PRK06935        159 FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD---KNRNDEIL-KRIP-------AGRWGEPD  227 (258)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC---hHHHHHHH-hcCC-------CCCCCCHH
Confidence            2458999999999987764       34567899999876542110000   01111111 1111       12367889


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      |++.++.+++.....  ...+.++.+.+|
T Consensus       228 dva~~~~~l~s~~~~--~~~G~~i~~dgg  254 (258)
T PRK06935        228 DLMGAAVFLASRASD--YVNGHILAVDGG  254 (258)
T ss_pred             HHHHHHHHHcChhhc--CCCCCEEEECCC
Confidence            999999998865322  223557777765

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.82  E-value=9.7e-19  Score=147.09  Aligned_cols=220  Identities=15%  Similarity=0.114  Sum_probs=143.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEec-CCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHHh---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~-r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      ++|+++||||+|+||++++++|.+.|   ++|.... |+.+........   .+.....+.+|+++.+++..+++.+   
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDG---ALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC---CeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999   7887764 443333322221   1334567889999988776655432   


Q ss_pred             -----C--CCCEEEECCCccCcccc----ccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcc
Q 020880           75 -----G--QPDVVVNCAALSVPRVC----ENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        75 -----~--~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                           +  ++|++||+||.......    ....+..+++|+.+++ .+++++...  ...+||++||...+.+.      
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~-~l~~~~~~~~~~~g~iv~isS~~~~~~~------  152 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPF-FIIQQALSRLRDNSRIINISSAATRISL------  152 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHH-HHHHHHHHHhhcCCeEEEECCcccccCC------
Confidence                 2  69999999997532211    1224667789999986 766665432  12489999999876432      


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                          .+...|+.||...+.+.+.+       +.++.++.|+.|.++-.......    ...........+       ...
T Consensus       153 ----~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~-------~~~  217 (252)
T PRK12747        153 ----PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD----PMMKQYATTISA-------FNR  217 (252)
T ss_pred             ----CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC----HHHHHHHHhcCc-------ccC
Confidence                23568999999999877754       34667899999987643111010    011111111111       224


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +.+.+|+|+++..++.....  -..+..+.+.+|
T Consensus       218 ~~~~~dva~~~~~l~s~~~~--~~~G~~i~vdgg  249 (252)
T PRK12747        218 LGEVEDIADTAAFLASPDSR--WVTGQLIDVSGG  249 (252)
T ss_pred             CCCHHHHHHHHHHHcCcccc--CcCCcEEEecCC
Confidence            68899999999998764321  123447777665

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.82  E-value=9.8e-19  Score=147.23  Aligned_cols=220  Identities=14%  Similarity=0.062  Sum_probs=147.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      +|+++||||+|.||.+++++|+++|   ++|++++|++++...+.+.+   +..+.++.+|++|++++.++++.    ++
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFAREG---AKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999999   89999999876655444332   34577889999999988776653    35


Q ss_pred             CCCEEEECCCccCc--c---ccccCchhhhhccccccHHHH----HhhhhhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVP--R---VCENDPDSAMSINVPSSLVNW----LSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~--~---~~~~~~~~~~~~n~~~~~~~~----l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|++||+||....  +   ....+.+..+++|+.+++ .+    +..+++.+..++|++||...+...         ..
T Consensus        83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~-~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~---------~~  152 (254)
T PRK07478         83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAF-LGAKHQIPAMLARGGGSLIFTSTFVGHTAG---------FP  152 (254)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCceEEEEechHhhccC---------CC
Confidence            79999999997532  1   122345677899998875 44    444455555689999998765311         12


Q ss_pred             CcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+.+.+.       .++.+++|+.+-.+-......  .. . ....+....+.       ..+...+
T Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~-~-~~~~~~~~~~~-------~~~~~~~  221 (254)
T PRK07478        153 GMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGD--TP-E-ALAFVAGLHAL-------KRMAQPE  221 (254)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccC--CH-H-HHHHHHhcCCC-------CCCcCHH
Confidence            35689999999998777642       356779999886542111000  00 1 11111111111       1256799


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      |+|+++++++.....  -..+.++.+.++
T Consensus       222 ~va~~~~~l~s~~~~--~~~G~~~~~dgg  248 (254)
T PRK07478        222 EIAQAALFLASDAAS--FVTGTALLVDGG  248 (254)
T ss_pred             HHHHHHHHHcCchhc--CCCCCeEEeCCc
Confidence            999999998865422  123447777655

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=7.7e-19  Score=147.17  Aligned_cols=218  Identities=17%  Similarity=0.163  Sum_probs=148.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEe-cCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      ++++||||||||+||+++++.|+++|   ++|+.+ .|++++...+...   .+..+.++.+|++|++++.++++.    
T Consensus         4 ~~~~ilI~Gasg~iG~~la~~l~~~g---~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          4 MGKVAIVTGASGGIGRAIAELLAKEG---AKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999   888888 8876554433332   234577899999999988776653    


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++++|+|||++|.....    ......+..+++|+.+.+ ++++++.    +.+.+++|++||...+....         
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~---------  150 (247)
T PRK05565         81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVM-LLTRYALPYMIKRKSGVIVNISSIWGLIGAS---------  150 (247)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCcEEEEECCHhhccCCC---------
Confidence            34799999999976321    122334677889999875 6666654    34556899999987654321         


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                       ....|+.+|...+.+++.+       +.+++++||+.+..+....     .......... ...       ....+...
T Consensus       151 -~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~-----~~~~~~~~~~-~~~-------~~~~~~~~  216 (247)
T PRK05565        151 -CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS-----FSEEDKEGLA-EEI-------PLGRLGKP  216 (247)
T ss_pred             -CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccc-----cChHHHHHHH-hcC-------CCCCCCCH
Confidence             2457999998888866654       3467889999986653311     1111111111 100       12235789


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +|+++++++++.....  ...+..+++.++
T Consensus       217 ~~va~~~~~l~~~~~~--~~~g~~~~~~~~  244 (247)
T PRK05565        217 EEIAKVVLFLASDDAS--YITGQIITVDGG  244 (247)
T ss_pred             HHHHHHHHHHcCCccC--CccCcEEEecCC
Confidence            9999999999876432  234557777765

>PRK09242 tropinone reductase; Provisional

Probab=99.82  E-value=1.1e-18  Score=147.26  Aligned_cols=220  Identities=14%  Similarity=0.115  Sum_probs=151.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHH---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      .+|+++||||+|.||+++++.|.++|   ++|+.++|+.+....+.+.+     +..+.++.+|+++++++.++++.   
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G---~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLG---ADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999   89999999876655444332     23577789999999987776653   


Q ss_pred             -hCCCCEEEECCCccCc----cccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCC
Q 020880           74 -FGQPDVVVNCAALSVP----RVCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                       ++++|+|||+||....    .....+++..+.+|+.+++ .+++++.    +.+..++|++||...+.+.         
T Consensus        85 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~---------  154 (257)
T PRK09242         85 HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAF-ELSRYAHPLLKQHASSAIVNIGSVSGLTHV---------  154 (257)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHhcCCceEEEECccccCCCC---------
Confidence             4679999999997422    1233456678899999986 7766663    4455699999998776532         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       .+...|+.+|...+.+++.+       +.++..++|+.+..+........   ........ ...++.       -+..
T Consensus       155 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~---~~~~~~~~-~~~~~~-------~~~~  222 (257)
T PRK09242        155 -RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD---PDYYEQVI-ERTPMR-------RVGE  222 (257)
T ss_pred             -CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC---hHHHHHHH-hcCCCC-------CCcC
Confidence             23567999999999988764       34677899999987753211111   11121111 122221       2456


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      .+|++.++..++.....  ...+..+.+.++
T Consensus       223 ~~~va~~~~~l~~~~~~--~~~g~~i~~~gg  251 (257)
T PRK09242        223 PEEVAAAVAFLCMPAAS--YITGQCIAVDGG  251 (257)
T ss_pred             HHHHHHHHHHHhCcccc--cccCCEEEECCC
Confidence            89999999988865321  112457777654

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=1.7e-18  Score=145.93  Aligned_cols=215  Identities=19%  Similarity=0.175  Sum_probs=144.2

Q ss_pred             CCcEEEEEcCCC--hhhHHHHHHHhhccCCCceEEEecCCCC-----------Chhhh---hhhCCCcceEEEeeCCCcc
Q 020880            2 SKKRVLVVGGTG--YLGQHLLQGLSEIEGKPYDVAATHHSTP-----------LPQLL---LDALPHSFVFFDVDLKSGS   65 (320)
Q Consensus         2 ~~~~ilItGatG--~IG~~l~~~L~~~g~~v~~v~~~~r~~~-----------~~~~~---~~~~~~~~~~~~~Dl~d~~   65 (320)
                      ++++||||||||  .||.+++++|+++|   ++|+++.|++.           ....+   ....+..+.++.+|+++.+
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G---~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   80 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKG---IDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcC---CcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            457899999996  69999999999999   88999988721           11111   1122346888999999999


Q ss_pred             cHHHHHHH----hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhc
Q 020880           66 GFDAVALK----FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYE  133 (320)
Q Consensus        66 ~~~~~~~~----~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~  133 (320)
                      ++..+++.    ++.+|+|||+||......    ...+++..+++|+.+++ .+++++..    .+..++|++||...++
T Consensus        81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~~ss~~~~~  159 (256)
T PRK12748         81 APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATM-LLSSAFAKQYDGKAGGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHhhhcCCeEEEEECCccccC
Confidence            88776654    357899999998753321    22334667899999986 77777653    2335899999987765


Q ss_pred             ccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceE
Q 020880          134 GVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVE  206 (320)
Q Consensus       134 ~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (320)
                      +.          .+...|+.+|...+.+++.+       +.+++.++|+.+..+...    .    ..... .....+  
T Consensus       160 ~~----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~----~----~~~~~-~~~~~~--  218 (256)
T PRK12748        160 PM----------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT----E----ELKHH-LVPKFP--  218 (256)
T ss_pred             CC----------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC----h----hHHHh-hhccCC--
Confidence            32          23568999999999987764       346788999877544211    0    11111 101111  


Q ss_pred             eecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          207 FFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       207 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                        .   ..+...+|+++++.+++.....  ...+.++++.++
T Consensus       219 --~---~~~~~~~~~a~~~~~l~~~~~~--~~~g~~~~~d~g  253 (256)
T PRK12748        219 --Q---GRVGEPVDAARLIAFLVSEEAK--WITGQVIHSEGG  253 (256)
T ss_pred             --C---CCCcCHHHHHHHHHHHhCcccc--cccCCEEEecCC
Confidence              0   1234579999999988765322  122458888765

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.82  E-value=1.2e-18  Score=138.90  Aligned_cols=206  Identities=18%  Similarity=0.202  Sum_probs=147.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC-CcceEEEeeCCCcccHHHHH----HHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLKSGSGFDAVA----LKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~----~~~~~~   77 (320)
                      .|.++|||||+-||.++++.|.+.|   ++|++..|+.+..+.+...++ ..+..+..|++|.+++..++    +.++++
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G---~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAG---AKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCC---CeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            4679999999999999999999999   899999999999998888876 46778899999998855444    566789


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      |++||+||....+    ....+++..+++|+.|.+   ..+|..+.+.+..++|.+||++..-.          ....+.
T Consensus        83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~----------y~~~~v  152 (246)
T COG4221          83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYP----------YPGGAV  152 (246)
T ss_pred             cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccccc----------CCCCcc
Confidence            9999999987542    223466788999999986   13444455666569999999874221          122568


Q ss_pred             HHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHH
Q 020880          151 YGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK  223 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  223 (320)
                      |+.+|+.+..+.+...       .+++.+-|+.|-...-........ ...+....           ....++..+|+|+
T Consensus       153 Y~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~-~~~~~~~y-----------~~~~~l~p~dIA~  220 (246)
T COG4221         153 YGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGD-DERADKVY-----------KGGTALTPEDIAE  220 (246)
T ss_pred             chhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCch-hhhHHHHh-----------ccCCCCCHHHHHH
Confidence            9999999998776543       355667777773321100000000 01111111           1123588999999


Q ss_pred             HHHHHHhhhh
Q 020880          224 IILALTNRWL  233 (320)
Q Consensus       224 ~~~~~~~~~~  233 (320)
                      ++.++++.|.
T Consensus       221 ~V~~~~~~P~  230 (246)
T COG4221         221 AVLFAATQPQ  230 (246)
T ss_pred             HHHHHHhCCC
Confidence            9999999864

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=1.3e-18  Score=144.66  Aligned_cols=212  Identities=14%  Similarity=0.152  Sum_probs=145.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ++|+++||||+|+||+++++.|+++|   ++|+++.|+....      ....+.++.+|++++  +.++++.++++|+||
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G---~~v~~~~r~~~~~------~~~~~~~~~~D~~~~--~~~~~~~~~~id~lv   72 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQG---AQVYGVDKQDKPD------LSGNFHFLQLDLSDD--LEPLFDWVPSVDILC   72 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCC---CEEEEEeCCcccc------cCCcEEEEECChHHH--HHHHHHhhCCCCEEE
Confidence            45799999999999999999999999   8899888875432      123567789999987  666777667899999


Q ss_pred             ECCCccCc-----cccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcchHH
Q 020880           82 NCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYG  152 (320)
Q Consensus        82 h~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~  152 (320)
                      |+||....     +....+++..+++|+.+++ ++++++.    +.+..++|++||...+.+..          ....|+
T Consensus        73 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~  141 (235)
T PRK06550         73 NTAGILDDYKPLLDTSLEEWQHIFDTNLTSTF-LLTRAYLPQMLERKSGIIINMCSIASFVAGG----------GGAAYT  141 (235)
T ss_pred             ECCCCCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCcEEEEEcChhhccCCC----------CCcccH
Confidence            99986421     2223345678899999985 7777664    34445899999987654321          245799


Q ss_pred             HHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHH
Q 020880          153 KSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII  225 (320)
Q Consensus       153 ~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  225 (320)
                      .+|...+.+.+.+       +.++.+++|+.+..+........    ..+........+       ...+...+|+|+++
T Consensus       142 ~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~-------~~~~~~~~~~a~~~  210 (235)
T PRK06550        142 ASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP----GGLADWVARETP-------IKRWAEPEEVAELT  210 (235)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCc----hHHHHHHhccCC-------cCCCCCHHHHHHHH
Confidence            9999988876653       34678899999977643211111    111111212222       12367789999999


Q ss_pred             HHHHhhhhccccccCceeEecCC
Q 020880          226 LALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +.++.....  ...+.++.+.+|
T Consensus       211 ~~l~s~~~~--~~~g~~~~~~gg  231 (235)
T PRK06550        211 LFLASGKAD--YMQGTIVPIDGG  231 (235)
T ss_pred             HHHcChhhc--cCCCcEEEECCc
Confidence            999865421  223457777665

>PRK12742 oxidoreductase; Provisional

Probab=99.81  E-value=1.5e-18  Score=144.49  Aligned_cols=216  Identities=16%  Similarity=0.143  Sum_probs=144.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-CChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      ++|+||||||+|.||++++++|+++|   ++|+.+.|+. +..+.+....  ...++.+|++|.+++.+.++.++.+|++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G---~~v~~~~~~~~~~~~~l~~~~--~~~~~~~D~~~~~~~~~~~~~~~~id~l   79 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDG---ANVRFTYAGSKDAAERLAQET--GATAVQTDSADRDAVIDVVRKSGALDIL   79 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEecCCCHHHHHHHHHHh--CCeEEecCCCCHHHHHHHHHHhCCCcEE
Confidence            36899999999999999999999999   7888776643 3333333322  3567889999999888888776679999


Q ss_pred             EECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCCcchHHHH
Q 020880           81 VNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKS  154 (320)
Q Consensus        81 ih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~s  154 (320)
                      ||+||.....    .+..+++..+++|+.+++ .++..+...  ...++|++||.....         .+..+...|+.+
T Consensus        80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~g~iv~isS~~~~~---------~~~~~~~~Y~~s  149 (237)
T PRK12742         80 VVNAGIAVFGDALELDADDIDRLFKINIHAPY-HASVEAARQMPEGGRIIIIGSVNGDR---------MPVAGMAAYAAS  149 (237)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhHHHHHHH-HHHHHHHHHHhcCCeEEEEecccccc---------CCCCCCcchHHh
Confidence            9999975331    122345778899999986 665544432  234899999975421         122346789999


Q ss_pred             HHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHH
Q 020880          155 KVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA  227 (320)
Q Consensus       155 K~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  227 (320)
                      |...|.+++.+       +.++.+++|+.+..+-..    ....   ....+....+.       ..+...+|+++++..
T Consensus       150 Kaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~----~~~~---~~~~~~~~~~~-------~~~~~p~~~a~~~~~  215 (237)
T PRK12742        150 KSALQGMARGLARDFGPRGITINVVQPGPIDTDANP----ANGP---MKDMMHSFMAI-------KRHGRPEEVAGMVAW  215 (237)
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccc----cccH---HHHHHHhcCCC-------CCCCCHHHHHHHHHH
Confidence            99999977654       245678999988654321    1101   11111111111       135789999999999


Q ss_pred             HHhhhhccccccCceeEecCC
Q 020880          228 LTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       228 ~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ++.....  ...+..+.+.++
T Consensus       216 l~s~~~~--~~~G~~~~~dgg  234 (237)
T PRK12742        216 LAGPEAS--FVTGAMHTIDGA  234 (237)
T ss_pred             HcCcccC--cccCCEEEeCCC
Confidence            8865322  123446776654

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.6e-19  Score=154.83  Aligned_cols=176  Identities=16%  Similarity=0.132  Sum_probs=124.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHHh--
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALKF--   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~--   74 (320)
                      .+|+|+||||+|+||++++++|+++|   ++|++++|+.++.....+.+     +..+.++.+|++|.+++.++++.+  
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G---~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKG---AHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            35799999999999999999999999   88999999865543322211     235778899999999988777643  


Q ss_pred             --CCCCEEEECCCccCcc--ccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCC---cccCC
Q 020880           75 --GQPDVVVNCAALSVPR--VCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFY---KEEDE  144 (320)
Q Consensus        75 --~~~d~Vih~a~~~~~~--~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~---~E~~~  144 (320)
                        +++|+|||+||...+.  ......+..+++|+.+.+   ..+++.+++.+..++|++||...+.......   ++..+
T Consensus        92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~  171 (306)
T PRK06197         92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERR  171 (306)
T ss_pred             hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccC
Confidence              5799999999976442  123345677899999843   2566666666667999999987543211112   22233


Q ss_pred             CCCcchHHHHHHHHHHHHHHHcC-------Ce--eEEeecccccC
Q 020880          145 IAPVNVYGKSKVAAEKFIYEKCS-------NF--AILRSSIIYGP  180 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~~~-------~~--~ilR~~~v~G~  180 (320)
                      ..+...|+.||...+.+.+.+..       +.  +.+.||.|..+
T Consensus       172 ~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~  216 (306)
T PRK06197        172 YNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE  216 (306)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence            45677899999999988776432       22  33578887544

>PRK06398 aldose dehydrogenase; Validated

Probab=99.81  E-value=1e-18  Score=147.43  Aligned_cols=218  Identities=17%  Similarity=0.171  Sum_probs=144.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      ++|++|||||+|.||.+++++|+++|   ++|+.+.|+....        ..+.++.+|++|++++.++++.    ++++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G---~~Vi~~~r~~~~~--------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   73 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEG---SNVINFDIKEPSY--------NDVDYFKVDVSNKEQVIKGIDYVISKYGRI   73 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCcccc--------CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999   8899999875432        2467799999999988777654    3579


Q ss_pred             CEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||......    ...+.+..+++|+.+++ .+++++.    +.+..++|++||...+.+.          .+..
T Consensus        74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  142 (258)
T PRK06398         74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIF-LMSKYTIPYMLKQDKGVIINIASVQSFAVT----------RNAA  142 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCeEEEEeCcchhccCC----------CCCc
Confidence            99999999753321    12234566899999985 6666553    3455699999998776432          2467


Q ss_pred             hHHHHHHHHHHHHHHHc------CCeeEEeecccccCCCCCCC--C-CCChHHHHHHHHhc-CCceEeecCcccCceeHH
Q 020880          150 VYGKSKVAAEKFIYEKC------SNFAILRSSIIYGPQTISPV--P-KSLPIQWIDSVLSK-GEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~------~~~~ilR~~~v~G~~~~~~~--~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~  219 (320)
                      .|+.+|...+.+.+.+.      .++..++|+.+-.+-.....  . .... ......... +...     ....+...+
T Consensus       143 ~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~p~  216 (258)
T PRK06398        143 AYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDP-EHVERKIREWGEMH-----PMKRVGKPE  216 (258)
T ss_pred             hhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCCh-hhhHHHHHhhhhcC-----CcCCCcCHH
Confidence            89999999999887653      23466888877543211000  0 0000 000000000 0000     112357899


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+|+++++++.....  ...+.++.+.+|.
T Consensus       217 eva~~~~~l~s~~~~--~~~G~~i~~dgg~  244 (258)
T PRK06398        217 EVAYVVAFLASDLAS--FITGECVTVDGGL  244 (258)
T ss_pred             HHHHHHHHHcCcccC--CCCCcEEEECCcc
Confidence            999999998865321  1234477777653

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.81  E-value=8.7e-19  Score=148.08  Aligned_cols=224  Identities=17%  Similarity=0.154  Sum_probs=151.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCce-EEEecCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHHh---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYD-VAATHHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~-v~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      ..|+|+||||+|+||++++++|+++|   ++ |+++.|+.++......   ..+..+.++.+|+++++++.++++..   
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G---~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERG---AAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCC---CCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999   77 8899998655443222   22345777899999999888777643   


Q ss_pred             -CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhh----cc-CceEEEeechhhhcccCCCCcccCC
Q 020880           75 -GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTE----NK-ENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        75 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~----~~-~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                       +++|+|||+||......    .....+..+++|+.+.+ ++++++.+    .+ ..++|++||...++...        
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~--------  152 (260)
T PRK06198         82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPF-FLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP--------  152 (260)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCCEEEEECCcccccCCC--------
Confidence             57999999999754321    12233566889999986 77666643    22 24799999998776432        


Q ss_pred             CCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCC--CCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          145 IAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVP--KSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                        ....|+.+|...|.+.+.+.       .++..++|+.+.++.......  ......++.. .....+       ...+
T Consensus       153 --~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~  222 (260)
T PRK06198        153 --FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEK-AAATQP-------FGRL  222 (260)
T ss_pred             --CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHH-HhccCC-------ccCC
Confidence              25689999999999887643       355779999998875311000  0011122222 111111       2246


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ++.+|+++++.+++.....  ...+.++++.++.
T Consensus       223 ~~~~~~a~~~~~l~~~~~~--~~~G~~~~~~~~~  254 (260)
T PRK06198        223 LDPDEVARAVAFLLSDESG--LMTGSVIDFDQSV  254 (260)
T ss_pred             cCHHHHHHHHHHHcChhhC--CccCceEeECCcc
Confidence            8999999999999875422  2235577776653

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.81  E-value=2.1e-18  Score=144.82  Aligned_cols=220  Identities=18%  Similarity=0.194  Sum_probs=146.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQ   76 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~   76 (320)
                      .+|+++||||+|.||++++++|+++|   ++|++..|+... .....+..+.++.++.+|++|++++.++++.    +++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G---~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAG---ADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999   888888886432 2222333345677899999999998887764    367


Q ss_pred             CCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hcc-CceEEEeechhhhcccCCCCcccCCCCC
Q 020880           77 PDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENK-ENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        77 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +|++||+||.....    ....+++..+++|+.+++ .+.+++.    +.+ ..++|++||...+.+..          .
T Consensus        84 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~-~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------~  152 (251)
T PRK12481         84 IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVF-FLSQAVAKQFVKQGNGGKIINIASMLSFQGGI----------R  152 (251)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHH-HHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC----------C
Confidence            99999999975432    123456678899999885 6655553    232 24899999998765322          2


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+.+.+       +.++..++||.+-.+..... ...  ........ ...+.       ..+...+|
T Consensus       153 ~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~-~~~--~~~~~~~~-~~~p~-------~~~~~pee  221 (251)
T PRK12481        153 VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL-RAD--TARNEAIL-ERIPA-------SRWGTPDD  221 (251)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc-ccC--hHHHHHHH-hcCCC-------CCCcCHHH
Confidence            457999999999877753       34667899998854421100 000  01111111 11111       13578999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +|+++..++.....  ...+.++.+.+|
T Consensus       222 va~~~~~L~s~~~~--~~~G~~i~vdgg  247 (251)
T PRK12481        222 LAGPAIFLSSSASD--YVTGYTLAVDGG  247 (251)
T ss_pred             HHHHHHHHhCcccc--CcCCceEEECCC
Confidence            99999999864321  123446666654

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.9e-18  Score=145.73  Aligned_cols=224  Identities=17%  Similarity=0.181  Sum_probs=142.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC----Chhhhhh---hCCCcceEEEeeCCCcccHHHHHHH--
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP----LPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK--   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~----~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~--   73 (320)
                      +|++|||||+|+||.++++.|+++|   ++|+.+.++..    ......+   ..+..+.++.+|++|++++.++++.  
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G---~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQG---AKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK   84 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCC---CcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence            4799999999999999999999999   77666654432    1222221   1234677889999999998877764  


Q ss_pred             --hCCCCEEEECCCccCc----cccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 --FGQPDVVVNCAALSVP----RVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 --~~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                        ++++|++||+||....    ..+..+++..+++|+.+++ .+++++...  ...++++++|+......          
T Consensus        85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~-~~~~~~~~~~~~~~~iv~~~ss~~~~~~----------  153 (257)
T PRK12744         85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAF-FFIKEAGRHLNDNGKIVTLVTSLLGAFT----------  153 (257)
T ss_pred             HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHH-HHHHHHHHhhccCCCEEEEecchhcccC----------
Confidence              3579999999997432    1222345678899999986 777777542  12367766433222111          


Q ss_pred             CCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .....|+.+|...|.+++.+.       .++.+++|+.+..+........... .... ......++     ....+.+.
T Consensus       154 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~-~~~~-~~~~~~~~-----~~~~~~~~  226 (257)
T PRK12744        154 PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAV-AYHK-TAAALSPF-----SKTGLTDI  226 (257)
T ss_pred             CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchh-hccc-cccccccc-----ccCCCCCH
Confidence            124689999999999888763       3567899999876532111000000 0000 00001111     12247899


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +|+|+++..++...   ....+.++++.+|..
T Consensus       227 ~dva~~~~~l~~~~---~~~~g~~~~~~gg~~  255 (257)
T PRK12744        227 EDIVPFIRFLVTDG---WWITGQTILINGGYT  255 (257)
T ss_pred             HHHHHHHHHhhccc---ceeecceEeecCCcc
Confidence            99999999998842   112345888887643

>PRK08589 short chain dehydrogenase; Validated

Probab=99.81  E-value=2.3e-18  Score=146.37  Aligned_cols=225  Identities=15%  Similarity=0.073  Sum_probs=145.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+|++|||||+|.||.+++++|+++|   ++|+++.|+ +........+   +.++.++.+|++|++++..+++.    +
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G---~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEG---AYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999   899999998 4444433322   34577899999999988776654    3


Q ss_pred             CCCCEEEECCCccCc-cc----cccCchhhhhccccccHHHHHhh----hhhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVP-RV----CENDPDSAMSINVPSSLVNWLSS----FTENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~-~~----~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +++|++||+||.... ..    .....+..+++|+.+.+ .++++    +++.+ .++|++||...+.+..         
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~---------  149 (272)
T PRK08589         81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTF-LMTKMLLPLMMEQG-GSIINTSSFSGQAADL---------  149 (272)
T ss_pred             CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcC-CEEEEeCchhhcCCCC---------
Confidence            579999999997532 11    11234566788998875 44444    44444 5999999987664321         


Q ss_pred             CCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                       ....|+.+|...+.+++.+.       .++..+.||.|..+-...... .... .+............   ....+...
T Consensus       150 -~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~-~~~~~~~~~~~~~~---~~~~~~~~  223 (272)
T PRK08589        150 -YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTG-TSED-EAGKTFRENQKWMT---PLGRLGKP  223 (272)
T ss_pred             -CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcc-cchh-hHHHHHhhhhhccC---CCCCCcCH
Confidence             24689999999999887652       356779999886543211000 0000 00000000000000   11125689


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|+|++++.++.....  ...+..+.+.++.
T Consensus       224 ~~va~~~~~l~s~~~~--~~~G~~i~vdgg~  252 (272)
T PRK08589        224 EEVAKLVVFLASDDSS--FITGETIRIDGGV  252 (272)
T ss_pred             HHHHHHHHHHcCchhc--CcCCCEEEECCCc
Confidence            9999999998865322  2234577776653

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.8e-18  Score=146.21  Aligned_cols=228  Identities=11%  Similarity=0.079  Sum_probs=149.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----CCcceEEEeeCCCcccHHHHHHHh---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      ++|++|||||+|.||.+++++|+++|   ++|++.+|+.++.....+.+    +.++.++.+|++|++++.++++.+   
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAG---ADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNI   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhh
Confidence            46799999999999999999999999   89999999866554443322    345778999999999988777643   


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +++|++||+||.....    .+.++++..+++|+.+.+   ..++..+++.+..++|++||...+.+..          .
T Consensus        84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~----------~  153 (263)
T PRK08339         84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIP----------N  153 (263)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCC----------c
Confidence            5799999999975332    223445677889988864   2344555555556999999987653221          2


Q ss_pred             cchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCC------CCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          148 VNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPV------PKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                      ...|+.+|...+.+.+.+.       .++..+.|+.+-.+-.....      .......... .+....+       ...
T Consensus       154 ~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p-------~~r  225 (263)
T PRK08339        154 IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQ-EYAKPIP-------LGR  225 (263)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHH-HHhccCC-------ccc
Confidence            4579999999998777642       34567889888543210000      0000001111 1111111       123


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      +...+|+|+++..++.....  ...+.++.+.+|...|
T Consensus       226 ~~~p~dva~~v~fL~s~~~~--~itG~~~~vdgG~~~~  261 (263)
T PRK08339        226 LGEPEEIGYLVAFLASDLGS--YINGAMIPVDGGRLNS  261 (263)
T ss_pred             CcCHHHHHHHHHHHhcchhc--CccCceEEECCCcccc
Confidence            57789999999998865322  1234578887765544

>PRK12743 oxidoreductase; Provisional

Probab=99.81  E-value=3.8e-18  Score=143.80  Aligned_cols=218  Identities=14%  Similarity=0.064  Sum_probs=146.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-Chhhhhh---hCCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-LPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      +++|+||||+|+||++++++|+++|   ++|+.+.|+.. ......+   ..+..+.++.+|++|++++.++++.    +
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQG---FDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999   88887766543 2322222   2345678899999999987776653    3


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc----c-CceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN----K-ENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~----~-~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +.+|+|||+||.....    ....+++..+.+|+.+.+ .+++++...    + -.++|++||.....          +.
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~l~~~~~~g~ii~isS~~~~~----------~~  147 (256)
T PRK12743         79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAF-LCSQIAARHMVKQGQGGRIINITSVHEHT----------PL  147 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCeEEEEEeeccccC----------CC
Confidence            5789999999975432    122345677899999986 777766542    1 24899999975322          23


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+++.+       +.++..++|+.+..+.....     ...... ....+.+.       ..+.+.
T Consensus       148 ~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~-----~~~~~~-~~~~~~~~-------~~~~~~  214 (256)
T PRK12743        148 PGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD-----DSDVKP-DSRPGIPL-------GRPGDT  214 (256)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc-----ChHHHH-HHHhcCCC-------CCCCCH
Confidence            34678999999999887654       34578899999988643110     011111 11111111       124688


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|++.++..++.....  ...+.++.+.++.
T Consensus       215 ~dva~~~~~l~~~~~~--~~~G~~~~~dgg~  243 (256)
T PRK12743        215 HEIASLVAWLCSEGAS--YTTGQSLIVDGGF  243 (256)
T ss_pred             HHHHHHHHHHhCcccc--CcCCcEEEECCCc
Confidence            9999999988865321  1235578787764

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.3e-18  Score=143.97  Aligned_cols=221  Identities=15%  Similarity=0.128  Sum_probs=148.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      +++|+||||+|+||++++++|+++|   ++|+++.|+.+......+   ..+..+.++.+|++|.+++.++++.    ++
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   83 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAREG---AKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYG   83 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4899999999999999999999999   889999998765443333   2244678899999999988776654    35


Q ss_pred             CCCEEEECCCccCcc-----ccccCchhhhhccccccHHHHHh----hhhhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLS----SFTENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~----~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|+|||+||.....     ...++++..+++|+.+.+ .+++    .+.+.+..++|++||...+.+..          
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------  152 (253)
T PRK06172         84 RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVW-LCMKYQIPLMLAQGGGAIVNTASVAGLGAAP----------  152 (253)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCcEEEEECchhhccCCC----------
Confidence            789999999975321     123345677889999875 4444    33445556899999988775432          


Q ss_pred             CcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+.+.+.       .++.+++|+.+-.+....... .. ..... .+....+.       ..+...+
T Consensus       153 ~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~-~~-~~~~~-~~~~~~~~-------~~~~~p~  222 (253)
T PRK06172        153 KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE-AD-PRKAE-FAAAMHPV-------GRIGKVE  222 (253)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcc-cC-hHHHH-HHhccCCC-------CCccCHH
Confidence            36689999999999887653       345678888875443211000 00 01111 11111111       1356799


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+++.+++++.....  ...+..+++.+|.
T Consensus       223 ~ia~~~~~l~~~~~~--~~~G~~i~~dgg~  250 (253)
T PRK06172        223 EVASAVLYLCSDGAS--FTTGHALMVDGGA  250 (253)
T ss_pred             HHHHHHHHHhCcccc--CcCCcEEEECCCc
Confidence            999999999876422  2235577887753

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.1e-18  Score=152.13  Aligned_cols=201  Identities=15%  Similarity=0.146  Sum_probs=140.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      +++|+||||||.||.+++++|+++|   ++|+++.|+++..+...+.   .+..+.++.+|++|++++.++++.    ++
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~G---~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARRG---AKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            5789999999999999999999999   8899999987655443332   234677899999999998877653    46


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHH---HHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLV---NWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~---~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      ++|++||+||.....    ...++.+..+++|+.+.+.   .+++.+++.+..+||++||...+....          ..
T Consensus        85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~----------~~  154 (334)
T PRK07109         85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIP----------LQ  154 (334)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCC----------cc
Confidence            799999999975332    1223345678888887741   355555555556999999998875422          25


Q ss_pred             chHHHHHHHHHHHHHHH---------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          149 NVYGKSKVAAEKFIYEK---------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~---------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      ..|+.+|...+.+.+.+         +.++++++|+.+-.|...          ....... ...     .....+...+
T Consensus       155 ~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~----------~~~~~~~-~~~-----~~~~~~~~pe  218 (334)
T PRK07109        155 SAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD----------WARSRLP-VEP-----QPVPPIYQPE  218 (334)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh----------hhhhhcc-ccc-----cCCCCCCCHH
Confidence            68999999988876543         235678899888654210          1111110 000     0112357899


Q ss_pred             HHHHHHHHHHhhh
Q 020880          220 DVVKIILALTNRW  232 (320)
Q Consensus       220 D~a~~~~~~~~~~  232 (320)
                      |+|++++.++.++
T Consensus       219 ~vA~~i~~~~~~~  231 (334)
T PRK07109        219 VVADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999874

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.81  E-value=3.7e-18  Score=144.60  Aligned_cols=224  Identities=14%  Similarity=0.092  Sum_probs=149.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+++++||||+|.||.+++++|+++|   ++|+.+.|++++.......+   +.++.++.+|++|.+++.++++.    +
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G---~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAG---ATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999   88888888876654443332   34577899999999998877764    3


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +.+|+|||+||.....    ....+.+..+++|+.+.+ .+++.+    ++.+..+||++||......          ..
T Consensus        86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~  154 (265)
T PRK07097         86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPF-IVSKAVIPSMIKKGHGKIINICSMMSELG----------RE  154 (265)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHH-HHHHHHHHHHHhcCCcEEEEEcCccccCC----------CC
Confidence            5689999999986432    223345677889998875 444444    3455569999999653221          12


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCC---CCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVP---KSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                      +...|+.+|...+.+.+.+       +.++..++|+.+..+.......   ......+ ...+....+       ...+.
T Consensus       155 ~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~~  226 (265)
T PRK07097        155 TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPF-DQFIIAKTP-------AARWG  226 (265)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhH-HHHHHhcCC-------ccCCc
Confidence            3568999999999988765       3466789999998774321000   0000001 111111111       11356


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ..+|+|..++.++.....  ...+..+.+.++.
T Consensus       227 ~~~dva~~~~~l~~~~~~--~~~g~~~~~~gg~  257 (265)
T PRK07097        227 DPEDLAGPAVFLASDASN--FVNGHILYVDGGI  257 (265)
T ss_pred             CHHHHHHHHHHHhCcccC--CCCCCEEEECCCc
Confidence            789999999999876321  1234467776653

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.80  E-value=4.7e-18  Score=142.37  Aligned_cols=219  Identities=18%  Similarity=0.190  Sum_probs=144.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC-CCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH---
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~-~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      |.+|.++||||||+||++++++|+++|   ++|+...++ ........+.   ....+..+.+|++|.+++.++++.   
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G---~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDG---FKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKA   77 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcC---CEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            677899999999999999999999999   777765443 3333222222   233466778999999988776653   


Q ss_pred             -hCCCCEEEECCCccCc----cccccCchhhhhccccccHHHHH----hhhhhccCceEEEeechhhhcccCCCCcccCC
Q 020880           74 -FGQPDVVVNCAALSVP----RVCENDPDSAMSINVPSSLVNWL----SSFTENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~~~l----~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                       ++++|+|||+||....    .....+++..+++|+.+++ .+.    +.+.+.+..++|++||.....+.         
T Consensus        78 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  147 (246)
T PRK12938         78 EVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLF-NVTKQVIDGMVERGWGRIINISSVNGQKGQ---------  147 (246)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCeEEEEEechhccCCC---------
Confidence             3579999999997532    1223345677899999874 544    44445666799999997643221         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       .+...|+.+|...+.+.+.+       +.++.+++|+.+..+....     .....+.... ...+.       ..+..
T Consensus       148 -~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~-----~~~~~~~~~~-~~~~~-------~~~~~  213 (246)
T PRK12938        148 -FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-----IRPDVLEKIV-ATIPV-------RRLGS  213 (246)
T ss_pred             -CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh-----cChHHHHHHH-hcCCc-------cCCcC
Confidence             23568999999888876653       3457889999987764311     1111222111 11121       23567


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      .+|++++++.++....  ....+..+.+.++
T Consensus       214 ~~~v~~~~~~l~~~~~--~~~~g~~~~~~~g  242 (246)
T PRK12938        214 PDEIGSIVAWLASEES--GFSTGADFSLNGG  242 (246)
T ss_pred             HHHHHHHHHHHcCccc--CCccCcEEEECCc
Confidence            8999999998886532  1234557777654

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3.6e-18  Score=144.11  Aligned_cols=219  Identities=15%  Similarity=0.079  Sum_probs=148.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+|+|+||||+|+||++++++|+++|   ++|+++.|+.+..+.+...   ...++.++.+|+++++++.++++.    +
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G---~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAG---AKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999   8999999987665444332   234577899999999988877654    3


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh----cc--------CceEEEeechhhhcccCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE----NK--------ENLLIHLSTDQVYEGVKSF  138 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~--------~~~~v~~Ss~~vy~~~~~~  138 (320)
                      +++|+|||+|+.....    ....+++..+++|+.+++ .+++++..    ..        ..++|++||...+...   
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---  160 (258)
T PRK06949         85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAF-FVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL---  160 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhH-HHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC---
Confidence            5799999999975332    122345677899999885 77666542    11        2489999998766432   


Q ss_pred             CcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCc
Q 020880          139 YKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDE  211 (320)
Q Consensus       139 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (320)
                             .+..+|+.+|...+.+++.+       +.++.+++|+.++++.......    .... ..+..-.+.      
T Consensus       161 -------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~-~~~~~~~~~------  222 (258)
T PRK06949        161 -------PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE----TEQG-QKLVSMLPR------  222 (258)
T ss_pred             -------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC----hHHH-HHHHhcCCC------
Confidence                   23568999999999877764       3467889999999875421110    0111 111111111      


Q ss_pred             ccCceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          212 CRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       212 ~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                       ..+...+|+++++.+++.....  ...+.++.+.++
T Consensus       223 -~~~~~p~~~~~~~~~l~~~~~~--~~~G~~i~~dgg  256 (258)
T PRK06949        223 -KRVGKPEDLDGLLLLLAADESQ--FINGAIISADDG  256 (258)
T ss_pred             -CCCcCHHHHHHHHHHHhChhhc--CCCCcEEEeCCC
Confidence             1345679999999999875321  122335555443

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.80  E-value=3.1e-18  Score=144.95  Aligned_cols=225  Identities=14%  Similarity=0.091  Sum_probs=147.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      .+|+++||||+|+||++++++|+++|   ++|+++.|+++..+.+....+..+.++.+|++|++++.++++.    ++++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEG---ARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            35899999999999999999999999   8999999987766666555555678899999999988776654    3679


Q ss_pred             CEEEECCCccCc--cccccC-------chhhhhccccccHHHHHhhhhh---ccCceEEEeechhhhcccCCCCcccCCC
Q 020880           78 DVVVNCAALSVP--RVCEND-------PDSAMSINVPSSLVNWLSSFTE---NKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        78 d~Vih~a~~~~~--~~~~~~-------~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      |++||+||....  +....+       ++..+++|+.+.+ .+++++..   ....++|++||...+.+.          
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------  150 (263)
T PRK06200         82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYL-LGAKAALPALKASGGSMIFTLSNSSFYPG----------  150 (263)
T ss_pred             CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHH-HHHHHHHHHHHhcCCEEEEECChhhcCCC----------
Confidence            999999997532  111111       4456789999985 66666643   112489999998876432          


Q ss_pred             CCcchHHHHHHHHHHHHHHHcC------CeeEEeecccccCCCCCC-C--CC-CCh-HHHHHHHHhcCCceEeecCcccC
Q 020880          146 APVNVYGKSKVAAEKFIYEKCS------NFAILRSSIIYGPQTISP-V--PK-SLP-IQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~~------~~~ilR~~~v~G~~~~~~-~--~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                      .+...|+.+|...+.+++.+..      ++..+.|+.+.-+-.... .  .. ... ..-....+....+       ..-
T Consensus       151 ~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r  223 (263)
T PRK06200        151 GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITP-------LQF  223 (263)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCC-------CCC
Confidence            2245799999999998876532      445688888754321100 0  00 000 0001111111111       123


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +...+|+|++++.++....+ .-..+.++.+.+|
T Consensus       224 ~~~~~eva~~~~fl~s~~~~-~~itG~~i~vdgG  256 (263)
T PRK06200        224 APQPEDHTGPYVLLASRRNS-RALTGVVINADGG  256 (263)
T ss_pred             CCCHHHHhhhhhheeccccc-CcccceEEEEcCc
Confidence            67889999999998865311 1123447777665

>PRK07069 short chain dehydrogenase; Validated

Probab=99.80  E-value=3.1e-18  Score=143.94  Aligned_cols=221  Identities=16%  Similarity=0.126  Sum_probs=144.1

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC-CCChhhhhhhCC-----CcceEEEeeCCCcccHHHHHHH----h
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALP-----HSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~-~~~~~~~~~~~~-----~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      +++||||+|+||.++++.|+++|   ++|+.+.|+ .+....+.+.+.     ..+..+.+|++|++++.++++.    +
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQG---AKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM   77 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            48999999999999999999999   899999998 444444433221     1234578999999998777654    3


Q ss_pred             CCCCEEEECCCccCccc----cccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           75 GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +++|+|||+||......    ...+....+++|+.+.+   ..+++.+++.+.++||++||...+....          +
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~----------~  147 (251)
T PRK07069         78 GGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP----------D  147 (251)
T ss_pred             CCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC----------C
Confidence            57999999999764321    12234566788887432   3677777777777999999998875432          2


Q ss_pred             cchHHHHHHHHHHHHHHHc---------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          148 VNVYGKSKVAAEKFIYEKC---------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~~---------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      ...|+.+|...+.+.+.+.         .++..++|+.+.++..............+.. +.++.+       ...+.++
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~  219 (251)
T PRK07069        148 YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRK-LARGVP-------LGRLGEP  219 (251)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHH-HhccCC-------CCCCcCH
Confidence            5579999999998877542         3457789998887653211000000011111 111111       1235689


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +|++++++.++..+..  ...+..+.+.++
T Consensus       220 ~~va~~~~~l~~~~~~--~~~g~~i~~~~g  247 (251)
T PRK07069        220 DDVAHAVLYLASDESR--FVTGAELVIDGG  247 (251)
T ss_pred             HHHHHHHHHHcCcccc--CccCCEEEECCC
Confidence            9999999998765321  123345555443

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.3e-18  Score=144.02  Aligned_cols=192  Identities=15%  Similarity=0.156  Sum_probs=138.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh----CCCcceEEEeeCCCcccHHHHHHHh-CCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA----LPHSFVFFDVDLKSGSGFDAVALKF-GQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~   77 (320)
                      ||+|+||||||+||.+++++|+++|   ++|++++|++++.....+.    ...++.++.+|++|++++.++++.. ..+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G---~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAG---ARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALP   77 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcC---CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcC
Confidence            5799999999999999999999999   8999999987655443332    1346788999999999988877653 257


Q ss_pred             CEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||......    ...++...+++|+.+++ ++++++.    +.+.+++|++||.....+.          ....
T Consensus        78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~  146 (243)
T PRK07102         78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPI-ALLTLLANRFEARGSGTIVGISSVAGDRGR----------ASNY  146 (243)
T ss_pred             CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHH-HHHHHHHHHHHhCCCCEEEEEecccccCCC----------CCCc
Confidence            99999998754321    12233467889999985 7776654    3456799999997543221          1245


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...+.+.+.+       +.++.+++|+.+.++....              .  ..+       ....+..+|++
T Consensus       147 ~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~--------------~--~~~-------~~~~~~~~~~a  203 (243)
T PRK07102        147 VYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG--------------L--KLP-------GPLTAQPEEVA  203 (243)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc--------------c--CCC-------ccccCCHHHHH
Confidence            7999999998877764       3467889999998753210              0  000       01246789999


Q ss_pred             HHHHHHHhh
Q 020880          223 KIILALTNR  231 (320)
Q Consensus       223 ~~~~~~~~~  231 (320)
                      +.++.++.+
T Consensus       204 ~~i~~~~~~  212 (243)
T PRK07102        204 KDIFRAIEK  212 (243)
T ss_pred             HHHHHHHhC
Confidence            999999886

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.80  E-value=1.1e-17  Score=139.34  Aligned_cols=212  Identities=13%  Similarity=0.094  Sum_probs=141.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----CCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----GQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~~d   78 (320)
                      +|++|||||+|.||++++++|+++|   ++|+++.|++++........  ++.++.+|++|++++.++++.+    +++|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   76 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQG---QPVIVSYRTHYPAIDGLRQA--GAQCIQADFSTNAGIMAFIDELKQHTDGLR   76 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCchhHHHHHHHc--CCEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence            5789999999999999999999999   89999999865443332222  3677899999999988777653    4699


Q ss_pred             EEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hcc--CceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           79 VVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENK--ENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        79 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~--~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      ++||+||.....    ....+.+..+++|+.+++ .+.+.+.    +.+  ..++|++||.....+.          ...
T Consensus        77 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~-~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------~~~  145 (236)
T PRK06483         77 AIIHNASDWLAEKPGAPLADVLARMMQIHVNAPY-LLNLALEDLLRGHGHAASDIIHITDYVVEKGS----------DKH  145 (236)
T ss_pred             EEEECCccccCCCcCccCHHHHHHHHHHcchHHH-HHHHHHHHHHHhCCCCCceEEEEcchhhccCC----------CCC
Confidence            999999975332    123345678899999875 4444443    333  3489999987643221          135


Q ss_pred             chHHHHHHHHHHHHHHHc------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          149 NVYGKSKVAAEKFIYEKC------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~~------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      ..|+.+|...|.+++.+.      .++..++|+.+.-+..    ..   ........ ...++.       -+...+|++
T Consensus       146 ~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~----~~---~~~~~~~~-~~~~~~-------~~~~~~~va  210 (236)
T PRK06483        146 IAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEG----DD---AAYRQKAL-AKSLLK-------IEPGEEEII  210 (236)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCC----CC---HHHHHHHh-ccCccc-------cCCCHHHHH
Confidence            589999999999887653      2455688987732211    00   01111111 122221       135689999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +++..++...    ...+.++.+.+|.
T Consensus       211 ~~~~~l~~~~----~~~G~~i~vdgg~  233 (236)
T PRK06483        211 DLVDYLLTSC----YVTGRSLPVDGGR  233 (236)
T ss_pred             HHHHHHhcCC----CcCCcEEEeCccc
Confidence            9999998642    2334577777654

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.4e-17  Score=140.25  Aligned_cols=221  Identities=16%  Similarity=0.132  Sum_probs=147.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhh---hCCCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      .+|+++||||+|.||++++++|+++|   ++|++..|+.+. .....+   ..+.++.++.+|++|++++.++++.    
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G---~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   83 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAG---ADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE   83 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999   899999987643 232222   2234577889999999988877654    


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++++|+|||+||.....    ....+.+..+++|+.+++ .+++++    .+.+..++|++||.+.+.....        
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------  154 (254)
T PRK06114         84 LGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVF-LSCQAEARAMLENGGGSIVNIASMSGIIVNRG--------  154 (254)
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhH-HHHHHHHHHHHhcCCcEEEEECchhhcCCCCC--------
Confidence            35789999999975432    122345677889999985 555554    3445568999999875432211        


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+.+.+       +.++.+++|+.+..+-....  . .. ... .......++       ..+...
T Consensus       155 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~--~-~~-~~~-~~~~~~~p~-------~r~~~~  222 (254)
T PRK06114        155 LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP--E-MV-HQT-KLFEEQTPM-------QRMAKV  222 (254)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc--c-ch-HHH-HHHHhcCCC-------CCCcCH
Confidence            12457999999998877664       34567899999877643111  0 11 111 111112221       125678


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +|++.++++++.....  ...+.++.+.+|
T Consensus       223 ~dva~~~~~l~s~~~~--~~tG~~i~~dgg  250 (254)
T PRK06114        223 DEMVGPAVFLLSDAAS--FCTGVDLLVDGG  250 (254)
T ss_pred             HHHHHHHHHHcCcccc--CcCCceEEECcC
Confidence            9999999998865321  223447777665

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3.2e-18  Score=143.90  Aligned_cols=221  Identities=11%  Similarity=0.096  Sum_probs=147.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      +|+++||||+|.||+++++.|+++|   +.|++.+|+.+......+.   .+..+.++.+|++|++++.++++.    ++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G---~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEG---ANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFG   77 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999   8899999987655444332   234677899999999988776654    35


Q ss_pred             CCCEEEECCCccCc----cccccCchhhhhccccccHHHHHhhhhh----cc-CceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVP----RVCENDPDSAMSINVPSSLVNWLSSFTE----NK-ENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      .+|+|||+||....    +.+..+++..+++|+.+++ ++++++.+    .+ ..++|++||...+.+..          
T Consensus        78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------  146 (252)
T PRK07677         78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTF-YCSQAVGKYWIEKGIKGNIINMVATYAWDAGP----------  146 (252)
T ss_pred             CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHH-HHHHHHHHHHHhcCCCEEEEEEcChhhccCCC----------
Confidence            78999999986432    1223345678999999986 77777732    22 24899999886543221          


Q ss_pred             CcchHHHHHHHHHHHHHH----H----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          147 PVNVYGKSKVAAEKFIYE----K----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~----~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      ....|+.+|...+.+.+.    +    +.++..++||.+..+........  ..... +.+.+..++       ..+...
T Consensus       147 ~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~--~~~~~-~~~~~~~~~-------~~~~~~  216 (252)
T PRK07677        147 GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWE--SEEAA-KRTIQSVPL-------GRLGTP  216 (252)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccC--CHHHH-HHHhccCCC-------CCCCCH
Confidence            245799999999987764    2    34567799998875321100000  01111 112111121       136788


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|+++++..++.....  ...+.++.+.++.
T Consensus       217 ~~va~~~~~l~~~~~~--~~~g~~~~~~gg~  245 (252)
T PRK07677        217 EEIAGLAYFLLSDEAA--YINGTCITMDGGQ  245 (252)
T ss_pred             HHHHHHHHHHcCcccc--ccCCCEEEECCCe
Confidence            9999999888765321  2234467776653

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3.8e-18  Score=142.38  Aligned_cols=192  Identities=15%  Similarity=0.123  Sum_probs=139.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhC-CCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFG-QPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~~d~Vi   81 (320)
                      |++++||||||+||++++++|+++|   ++|+++.|+++..+.+... ..++.++.+|++|.+++.++++... .+|.++
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i   76 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQG---WQVIACGRNQSVLDELHTQ-SANIFTLAFDVTDHPGTKAALSQLPFIPELWI   76 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHHh-cCCCeEEEeeCCCHHHHHHHHHhcccCCCEEE
Confidence            4789999999999999999999999   8999999986655444332 2357789999999999999888642 479999


Q ss_pred             ECCCccCc-cc---cccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCCcchHHHHH
Q 020880           82 NCAALSVP-RV---CENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSK  155 (320)
Q Consensus        82 h~a~~~~~-~~---~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK  155 (320)
                      |+||.... +.   ..++.+..+++|+.+++ ++++++...  +..++|++||.....+          ......|+.+|
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~iv~isS~~~~~~----------~~~~~~Y~asK  145 (240)
T PRK06101         77 FNAGDCEYMDDGKVDATLMARVFNVNVLGVA-NCIEGIQPHLSCGHRVVIVGSIASELA----------LPRAEAYGASK  145 (240)
T ss_pred             EcCcccccCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHhhhcCCeEEEEechhhccC----------CCCCchhhHHH
Confidence            99986422 11   12234567899999996 888887652  2247999988653221          12355899999


Q ss_pred             HHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHH
Q 020880          156 VAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       156 ~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  228 (320)
                      ...+.+.+.+       +.+++++||+.++++-....                .....       ..+..+|+|+.++..
T Consensus       146 ~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~----------------~~~~~-------~~~~~~~~a~~i~~~  202 (240)
T PRK06101        146 AAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN----------------TFAMP-------MIITVEQASQEIRAQ  202 (240)
T ss_pred             HHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC----------------CCCCC-------cccCHHHHHHHHHHH
Confidence            9999987653       45678899999988643210                00000       136799999999999


Q ss_pred             Hhhh
Q 020880          229 TNRW  232 (320)
Q Consensus       229 ~~~~  232 (320)
                      ++..
T Consensus       203 i~~~  206 (240)
T PRK06101        203 LARG  206 (240)
T ss_pred             HhcC
Confidence            9873

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.1e-18  Score=147.12  Aligned_cols=161  Identities=16%  Similarity=0.096  Sum_probs=118.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      +++||||||||+||++++++|+++|   ++|++++|+++....+.+   ..+..+.++.+|++|++++..++.  .++|+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~id~   76 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKG---HNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE--WDVDV   76 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc--CCCCE
Confidence            5789999999999999999999999   899999998654433322   223457789999999998887765  38999


Q ss_pred             EEECCCccCcccc----ccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHH
Q 020880           80 VVNCAALSVPRVC----ENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYG  152 (320)
Q Consensus        80 Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~  152 (320)
                      |||+||.......    ....+..+++|+.+++   ..+++.+.+.+.++||++||...+...          .....|+
T Consensus        77 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~----------~~~~~Y~  146 (257)
T PRK09291         77 LLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG----------PFTGAYC  146 (257)
T ss_pred             EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC----------CCcchhH
Confidence            9999997643211    1223456788988764   134445555666799999997654321          1356899


Q ss_pred             HHHHHHHHHHHH-------HcCCeeEEeecccc
Q 020880          153 KSKVAAEKFIYE-------KCSNFAILRSSIIY  178 (320)
Q Consensus       153 ~sK~~~e~~~~~-------~~~~~~ilR~~~v~  178 (320)
                      .+|...|.+.+.       .+.+++++||+.+.
T Consensus       147 ~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~  179 (257)
T PRK09291        147 ASKHALEAIAEAMHAELKPFGIQVATVNPGPYL  179 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence            999999987654       35678999998763

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.79  E-value=8.4e-18  Score=141.03  Aligned_cols=219  Identities=18%  Similarity=0.136  Sum_probs=139.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEec-CCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~-r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      ||+||||||+|+||+++++.|+++|   ++|+... |+++.......   ..+.++.++.+|++|++++.++++.    +
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARG---WSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF   78 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence            6799999999999999999999999   7777655 44333333222   2234678899999999988777654    3


Q ss_pred             CCCCEEEECCCccCccc-----cccCchhhhhccccccHHHHHhhhhh-cc------CceEEEeechhhhcccCCCCccc
Q 020880           75 GQPDVVVNCAALSVPRV-----CENDPDSAMSINVPSSLVNWLSSFTE-NK------ENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~~~l~~~~~-~~------~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                      +.+|+|||+||...+..     ...+.+..+++|+.+++ .+++++.+ ..      -.++|++||.+.+....      
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~------  151 (248)
T PRK06947         79 GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAY-LCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP------  151 (248)
T ss_pred             CCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHH-HHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC------
Confidence            57999999999754321     12233566889999885 55543332 11      12699999976532211      


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                         .+...|+.+|...+.+.+.+       +.++.++||+.+..+.....   ... .... ......+.       .-.
T Consensus       152 ---~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~---~~~-~~~~-~~~~~~~~-------~~~  216 (248)
T PRK06947        152 ---NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG---GQP-GRAA-RLGAQTPL-------GRA  216 (248)
T ss_pred             ---CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc---CCH-HHHH-HHhhcCCC-------CCC
Confidence               11346999999999876653       35678899999987642110   011 1111 11111111       114


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ..++|++++++.++..+..  ...+.++.+.++
T Consensus       217 ~~~e~va~~~~~l~~~~~~--~~~G~~~~~~gg  247 (248)
T PRK06947        217 GEADEVAETIVWLLSDAAS--YVTGALLDVGGG  247 (248)
T ss_pred             cCHHHHHHHHHHHcCcccc--CcCCceEeeCCC
Confidence            6789999999998876431  123446666543

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.1e-17  Score=141.63  Aligned_cols=223  Identities=15%  Similarity=0.116  Sum_probs=145.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+++++||||+|+||+++++.|+++|   ++|+++.|+... .....   ..+..+.++.+|+++++++.++++.    +
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G---~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHG---ANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEecCCHHH-HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999999   889999988642 22211   1134567889999999988777654    3


Q ss_pred             CCCCEEEECCCccCcccc----ccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPRVC----ENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +.+|+|||+||.......    ..+.+..+++|+.+++ .+++++.    +.+..++|++||......         +..
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------~~~  150 (263)
T PRK08226         81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVW-NVTKAVLPEMIARKDGRIVMMSSVTGDMV---------ADP  150 (263)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHhcCCcEEEEECcHHhccc---------CCC
Confidence            578999999997543221    2233456889999986 7777654    344458999998754210         112


Q ss_pred             CcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCC---CCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          147 PVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPV---PKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                      +...|+.+|...|.+++.+.       .++..++|+.+.++-.....   ........+.. +..+.++       ..+.
T Consensus       151 ~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~p~-------~~~~  222 (263)
T PRK08226        151 GETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTE-MAKAIPL-------RRLA  222 (263)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHH-HhccCCC-------CCCC
Confidence            35679999999998777652       35678999998876321100   00011112222 2122221       2356


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ..+|+|+++..++.....  ...+.++.+.+|
T Consensus       223 ~~~~va~~~~~l~~~~~~--~~~g~~i~~dgg  252 (263)
T PRK08226        223 DPLEVGELAAFLASDESS--YLTGTQNVIDGG  252 (263)
T ss_pred             CHHHHHHHHHHHcCchhc--CCcCceEeECCC
Confidence            899999999888754321  223446667665

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.79  E-value=6.5e-18  Score=142.15  Aligned_cols=220  Identities=13%  Similarity=0.054  Sum_probs=147.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+|++|||||+|.||.+++++|+++|   ++|++..|+.+..+.+.+.+   +.++.++.+|++|++++.++++.    +
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAG---AQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999   89999999876655444332   34567789999999998777653    4


Q ss_pred             CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hcc-CceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENK-ENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +++|++||+||......    ...+.+..+++|+.+++ .+++++.    +.+ ..++|++||....-..        .+
T Consensus        85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------~~  155 (253)
T PRK05867         85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVF-LTAQAAAKAMVKQGQGGVIINTASMSGHIIN--------VP  155 (253)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHH-HHHHHHHHHHHhcCCCcEEEEECcHHhcCCC--------CC
Confidence            68999999999764321    12334566789999986 6666654    222 2379999987643110        01


Q ss_pred             CCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .....|+.+|...+.+.+.+.       .++..++||.+-.+-..     ... ... .......+.       ..+...
T Consensus       156 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~-----~~~-~~~-~~~~~~~~~-------~r~~~p  221 (253)
T PRK05867        156 QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVE-----PYT-EYQ-PLWEPKIPL-------GRLGRP  221 (253)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccc-----cch-HHH-HHHHhcCCC-------CCCcCH
Confidence            123579999999999887653       35677899888554321     111 111 111111111       235789


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|+|++++.++.....  ...+.++.+.+|.
T Consensus       222 ~~va~~~~~L~s~~~~--~~tG~~i~vdgG~  250 (253)
T PRK05867        222 EELAGLYLYLASEASS--YMTGSDIVIDGGY  250 (253)
T ss_pred             HHHHHHHHHHcCcccC--CcCCCeEEECCCc
Confidence            9999999999865321  2234577777663

>TIGR02415 23BDH acetoin reductases

Probab=99.79  E-value=5e-18  Score=142.90  Aligned_cols=222  Identities=18%  Similarity=0.141  Sum_probs=142.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----hCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----FGQ   76 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~~~   76 (320)
                      |+++||||+|+||.+++++|++.|   ++|+++.|+++....+...   .+..+.++.+|++|++++.++++.    ++.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   77 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDG---FAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGG   77 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999   8899999886544433322   234577889999999988776653    357


Q ss_pred             CCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hcc-CceEEEeechhhhcccCCCCcccCCCCC
Q 020880           77 PDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENK-ENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        77 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +|+|||+|+.....    .+..+.+..+++|+.+++ .+++++.    +.+ ..++|++||.....+..          .
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~  146 (254)
T TIGR02415        78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVL-FGIQAAARQFKKQGHGGKIINAASIAGHEGNP----------I  146 (254)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHhCCCCeEEEEecchhhcCCCC----------C
Confidence            89999999975331    222344577899999875 5555443    333 25899999976543221          3


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCC-----CChHHHHHHHHhcCCceEeecCcccCc
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPK-----SLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                      .+.|+.+|...+.+++.+       +..+.+++|+.+..+........     ...............       ....+
T Consensus       147 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  219 (254)
T TIGR02415       147 LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEI-------ALGRP  219 (254)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhC-------CCCCC
Confidence            668999999999988754       23567789988754421000000     000000000000000       11236


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ...+|+++++..++......  ..+..+.+.++
T Consensus       220 ~~~~~~a~~~~~l~~~~~~~--~~g~~~~~d~g  250 (254)
T TIGR02415       220 SEPEDVAGLVSFLASEDSDY--ITGQSILVDGG  250 (254)
T ss_pred             CCHHHHHHHHHhhcccccCC--ccCcEEEecCC
Confidence            88899999999999875322  12335555554

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3.5e-18  Score=144.61  Aligned_cols=221  Identities=18%  Similarity=0.181  Sum_probs=146.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      ++++|||||+|.||++++++|+++|   ++|+++.|+.+........   .+..+.++.+|++|++++.++++.    ++
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~   85 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARAG---ANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG   85 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999999   8899999986654433222   234567789999999988877764    35


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc---cCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN---KENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~---~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      ++|+|||+||.....    ....+++..+++|+.+++ ++++++...   ...++|++||...+.+.          ...
T Consensus        86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~-~l~~~~~~~l~~~~g~iv~iss~~~~~~~----------~~~  154 (264)
T PRK07576         86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTF-NVLKAAYPLLRRPGASIIQISAPQAFVPM----------PMQ  154 (264)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhCCCEEEEECChhhccCC----------CCc
Confidence            789999999854321    122344567889999986 777766431   12489999998664321          235


Q ss_pred             chHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          149 NVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      ..|+.+|...|.+++.+.       .+...++|+.+.+....   .................+       ...+...+|+
T Consensus       155 ~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~---~~~~~~~~~~~~~~~~~~-------~~~~~~~~dv  224 (264)
T PRK07576        155 AHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGM---ARLAPSPELQAAVAQSVP-------LKRNGTKQDI  224 (264)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHH---hhcccCHHHHHHHHhcCC-------CCCCCCHHHH
Confidence            689999999999888652       35578999888653211   000000111111111111       1236789999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCCC
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |++++.++..+..  ...+..+.+.++.
T Consensus       225 a~~~~~l~~~~~~--~~~G~~~~~~gg~  250 (264)
T PRK07576        225 ANAALFLASDMAS--YITGVVLPVDGGW  250 (264)
T ss_pred             HHHHHHHcChhhc--CccCCEEEECCCc
Confidence            9999999875321  1234466676653

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.79  E-value=4.4e-18  Score=142.71  Aligned_cols=192  Identities=15%  Similarity=0.115  Sum_probs=137.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHH----
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      +++++||||+|+||++++++|+++|   ++|++..|+++....+...+     +..+.++.+|++|++++.++++.    
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKG---RDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDE   78 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999   88999999876554443321     23577889999999988776654    


Q ss_pred             hCCCCEEEECCCccCcccc----ccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 FGQPDVVVNCAALSVPRVC----ENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++++|+|||+||.......    ....+..+++|+.+.+ ++++++    ++.+..++|++||.......         +
T Consensus        79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~  148 (248)
T PRK08251         79 LGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAAL-AQCEAAMEIFREQGSGHLVLISSVSAVRGL---------P  148 (248)
T ss_pred             cCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCeEEEEeccccccCC---------C
Confidence            3579999999997543211    1233567889999885 666665    34566699999997654321         1


Q ss_pred             CCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+.+.+.       .++++++|+.+.++...              ..  +..        ...+..
T Consensus       149 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~--------------~~--~~~--------~~~~~~  204 (248)
T PRK08251        149 GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA--------------KA--KST--------PFMVDT  204 (248)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh--------------cc--ccC--------CccCCH
Confidence            235689999999988776542       35678999988654321              00  000        124779


Q ss_pred             HHHHHHHHHHHhh
Q 020880          219 RDVVKIILALTNR  231 (320)
Q Consensus       219 ~D~a~~~~~~~~~  231 (320)
                      +|+|++++.++++
T Consensus       205 ~~~a~~i~~~~~~  217 (248)
T PRK08251        205 ETGVKALVKAIEK  217 (248)
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999999986

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.6e-18  Score=148.67  Aligned_cols=195  Identities=17%  Similarity=0.212  Sum_probs=137.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      .+++|+||||+|+||.+++++|+++|   ++|++++|+.+..+.+.+.+   +..+.++.+|++|.+++.++++    .+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G---~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRG---ATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999999   89999999876554443322   3356788999999999888776    34


Q ss_pred             CCCCEEEECCCccCccccc------cCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCC
Q 020880           75 GQPDVVVNCAALSVPRVCE------NDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~------~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      +++|+|||+||........      .+.+..+++|+.+.+ .+++++    ++.+..++|++||.+++...         
T Consensus       116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  185 (293)
T PRK05866        116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPL-RLIRGLAPGMLERGDGHIINVATWGVLSEA---------  185 (293)
T ss_pred             CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCcEEEEECChhhcCCC---------
Confidence            6899999999976432111      233567889998875 555544    45666799999998765421         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      ....+.|+.+|...+.+++.+       +.++.+++|+.+-.+-..             ... ....        ...+.
T Consensus       186 ~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~-------------~~~-~~~~--------~~~~~  243 (293)
T PRK05866        186 SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA-------------PTK-AYDG--------LPALT  243 (293)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccc-------------ccc-cccC--------CCCCC
Confidence            112468999999999877664       345677888866433210             000 0000        11367


Q ss_pred             HHHHHHHHHHHHhh
Q 020880          218 VRDVVKIILALTNR  231 (320)
Q Consensus       218 v~D~a~~~~~~~~~  231 (320)
                      .+++|+.++.++++
T Consensus       244 pe~vA~~~~~~~~~  257 (293)
T PRK05866        244 ADEAAEWMVTAART  257 (293)
T ss_pred             HHHHHHHHHHHHhc
Confidence            89999999999986

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.4e-18  Score=148.91  Aligned_cols=175  Identities=17%  Similarity=0.165  Sum_probs=127.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHHh-
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALKF-   74 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~-   74 (320)
                      |++|+++||||||.||.+++++|+++|   ++|++.+|+.++.....+.+     ...+.++.+|+.|.++++++++.+ 
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G---~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~   88 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAG---AEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR   88 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999   89999999876554433322     235778999999999988877653 


Q ss_pred             ---CCCCEEEECCCccCcc---ccccCchhhhhccccccHHHHHhhhh---hccCceEEEeechhhhcccC--CCCcccC
Q 020880           75 ---GQPDVVVNCAALSVPR---VCENDPDSAMSINVPSSLVNWLSSFT---ENKENLLIHLSTDQVYEGVK--SFYKEED  143 (320)
Q Consensus        75 ---~~~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~~~l~~~~---~~~~~~~v~~Ss~~vy~~~~--~~~~E~~  143 (320)
                         +++|++||+||.....   ......+..+.+|+.+.+ .+.+.+.   +.+..++|++||...+....  ..++++.
T Consensus        89 ~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~-~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~  167 (313)
T PRK05854         89 AEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHF-ALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWER  167 (313)
T ss_pred             HhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHH-HHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccc
Confidence               5699999999986542   223456778999999975 5554443   12234899999986543221  1234444


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHc---------CCeeEEeeccccc
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEKC---------SNFAILRSSIIYG  179 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~~---------~~~~ilR~~~v~G  179 (320)
                      +..+...|+.||...+.+.+++.         ..+..+.||.|-.
T Consensus       168 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T  212 (313)
T PRK05854        168 SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPT  212 (313)
T ss_pred             cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceecc
Confidence            55667789999999999877653         2456688888754

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.79  E-value=4.4e-18  Score=139.65  Aligned_cols=202  Identities=14%  Similarity=0.150  Sum_probs=146.1

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCC----cceEEEeeCCCcccHHHHHHHh--
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH----SFVFFDVDLKSGSGFDAVALKF--   74 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~Dl~d~~~~~~~~~~~--   74 (320)
                      |++++++|||||+-||..++++|.++|   ++|+++.|+.++...+.+++.+    .+.++.+|+++++++..+.+.+  
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g---~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~   80 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRG---YNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKE   80 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHh
Confidence            457899999999999999999999999   9999999999988777776543    3578999999999988877543  


Q ss_pred             --CCCCEEEECCCccCcc-c---cccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 --GQPDVVVNCAALSVPR-V---CENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 --~~~d~Vih~a~~~~~~-~---~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                        ..+|++||+||..... .   +...-+..+++|+.+..   ..++....+.+..+||.++|.+.|-+...        
T Consensus        81 ~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~--------  152 (265)
T COG0300          81 RGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPY--------  152 (265)
T ss_pred             cCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcc--------
Confidence              2699999999987543 2   22233577899998864   14555556666669999999998864322        


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                        .+.|+.||...-.+-+..       +..+..+.||.+.-.-..     .      ..   .+....   .-.+-++..
T Consensus       153 --~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-----~------~~---~~~~~~---~~~~~~~~~  213 (265)
T COG0300         153 --MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-----A------KG---SDVYLL---SPGELVLSP  213 (265)
T ss_pred             --hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-----c------cc---cccccc---cchhhccCH
Confidence              678999999887765543       345677888777533211     0      00   000000   001235889


Q ss_pred             HHHHHHHHHHHhhh
Q 020880          219 RDVVKIILALTNRW  232 (320)
Q Consensus       219 ~D~a~~~~~~~~~~  232 (320)
                      +|+|+..+.++.+.
T Consensus       214 ~~va~~~~~~l~~~  227 (265)
T COG0300         214 EDVAEAALKALEKG  227 (265)
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999999999883

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.2e-17  Score=140.31  Aligned_cols=194  Identities=15%  Similarity=0.115  Sum_probs=136.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhhhC----CCcceEEEeeCCCcccHHHHHHHh---
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLDAL----PHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      .++|+||||||.||++++++|+++|.  ++|+++.|++++ .....+.+    ..+++++.+|++|.+++.++++..   
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg--~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAP--ARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCC--CeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            57899999999999999999999843  789999998775 43332222    236788999999999876666533   


Q ss_pred             CCCCEEEECCCccCcccc-ccCc---hhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           75 GQPDVVVNCAALSVPRVC-ENDP---DSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~-~~~~---~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +++|++||++|....... ..++   ...+++|+.+++   ..+++.+.+.+..++|++||...+.+.          .+
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~----------~~  155 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVR----------RS  155 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCC----------CC
Confidence            479999999987543211 1122   245899999875   236777777777799999998654321          23


Q ss_pred             cchHHHHHHHHHHHHHH-------HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYE-------KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~-------~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.||.....+.+.       .+.++.+++|+.+.-+-..             . . ...         ...+..+|
T Consensus       156 ~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~-------------~-~-~~~---------~~~~~~~~  211 (253)
T PRK07904        156 NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA-------------H-A-KEA---------PLTVDKED  211 (253)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc-------------c-C-CCC---------CCCCCHHH
Confidence            45799999998865443       3467889999999754210             0 0 000         01368899


Q ss_pred             HHHHHHHHHhhh
Q 020880          221 VVKIILALTNRW  232 (320)
Q Consensus       221 ~a~~~~~~~~~~  232 (320)
                      +|+.++.++.++
T Consensus       212 ~A~~i~~~~~~~  223 (253)
T PRK07904        212 VAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHcC
Confidence            999999999873

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.6e-18  Score=146.31  Aligned_cols=161  Identities=17%  Similarity=0.178  Sum_probs=120.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----CCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----GQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~~d   78 (320)
                      ||+++||||+|+||++++++|+++|   ++|++++|+.+....+..   .++.++.+|++|.+++.++++.+    +++|
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   74 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAG---YEVWATARKAEDVEALAA---AGFTAVQLDVNDGAALARLAEELEAEHGGLD   74 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHH---CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            5799999999999999999999999   899999998655443322   24677899999999888777544    5799


Q ss_pred             EEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh---ccCceEEEeechhhhcccCCCCcccCCCCCcchH
Q 020880           79 VVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE---NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVY  151 (320)
Q Consensus        79 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y  151 (320)
                      +|||+||.....    .+.++.+..+++|+.+++ ++++++..   .+..++|++||...+...          .....|
T Consensus        75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~Y  143 (274)
T PRK05693         75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVV-GVTRALFPLLRRSRGLVVNIGSVSGVLVT----------PFAGAY  143 (274)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHhhcCCEEEEECCccccCCC----------CCccHH
Confidence            999999975432    122345677889999985 77766632   233589999997654321          125689


Q ss_pred             HHHHHHHHHHHHHH-------cCCeeEEeecccccC
Q 020880          152 GKSKVAAEKFIYEK-------CSNFAILRSSIIYGP  180 (320)
Q Consensus       152 ~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~  180 (320)
                      +.+|...+.+.+.+       +.++.+++|+.|..+
T Consensus       144 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~  179 (274)
T PRK05693        144 CASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ  179 (274)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence            99999998876543       456788999999654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.78  E-value=1.4e-17  Score=139.09  Aligned_cols=217  Identities=19%  Similarity=0.194  Sum_probs=143.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC-CCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~-~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      |++|||||+|+||++++++|+++|   ++|+++.|+ ++....+...   .+..+.++.+|++|++++.++++.    ++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDG---YRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELG   77 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999   888888883 3222222221   134577899999999988777653    35


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHH----HHhhhhhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVN----WLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~----~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      .+|+|||+||...+.    ....++...++.|+.+++ .    ++..+++.+.+++|++||.....+.          .+
T Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~iv~iss~~~~~~~----------~~  146 (242)
T TIGR01829        78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVF-NVTQPVIDGMRERGWGRIINISSVNGQKGQ----------FG  146 (242)
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCcEEEEEcchhhcCCC----------CC
Confidence            799999999975432    122344566788988874 4    4455556666799999997543221          13


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+++.+       +.++..++|+.+.++....     .....+.... ...+.       ..+...+|
T Consensus       147 ~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-----~~~~~~~~~~-~~~~~-------~~~~~~~~  213 (242)
T TIGR01829       147 QTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMA-----MREDVLNSIV-AQIPV-------GRLGRPEE  213 (242)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccc-----cchHHHHHHH-hcCCC-------CCCcCHHH
Confidence            557999999888766654       3456789999998764321     1112222211 12221       12456789


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +++++.+++..+..  ...+..+.+.++.
T Consensus       214 ~a~~~~~l~~~~~~--~~~G~~~~~~gg~  240 (242)
T TIGR01829       214 IAAAVAFLASEEAG--YITGATLSINGGL  240 (242)
T ss_pred             HHHHHHHHcCchhc--CccCCEEEecCCc
Confidence            99999888765321  1235578877653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.78  E-value=8.7e-18  Score=142.19  Aligned_cols=198  Identities=17%  Similarity=0.193  Sum_probs=137.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh--CCCcceEEEeeCCCcccHHHHHHHh---CCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA--LPHSFVFFDVDLKSGSGFDAVALKF---GQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~---~~~   77 (320)
                      +++++||||+|+||.+++++|+++|   ++|++++|+++....+...  .+..+.++.+|++|++++.++++..   +.+
T Consensus         5 ~~~vlItG~s~~iG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   81 (263)
T PRK09072          5 DKRVLLTGASGGIGQALAEALAAAG---ARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGI   81 (263)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            5899999999999999999999999   8999999986655444332  2346788999999999887776543   578


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||.....    ....+.+..+++|+.+++ ++++.+.+    .+..++|++||...+.+.          ....
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~  150 (263)
T PRK09072         82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPM-QLTRALLPLLRAQPSAMVVNVGSTFGSIGY----------PGYA  150 (263)
T ss_pred             CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHhcCCCEEEEecChhhCcCC----------CCcc
Confidence            9999999975432    112234567889999986 77776643    334589999887654321          1256


Q ss_pred             hHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...+.+++.+.       .++..+.|+.+..+-..         ..... .  ...+      ......++|+|
T Consensus       151 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~---------~~~~~-~--~~~~------~~~~~~~~~va  212 (263)
T PRK09072        151 SYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS---------EAVQA-L--NRAL------GNAMDDPEDVA  212 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh---------hhccc-c--cccc------cCCCCCHHHHH
Confidence            79999999888776543       34566778776443210         00000 0  0000      11357889999


Q ss_pred             HHHHHHHhhh
Q 020880          223 KIILALTNRW  232 (320)
Q Consensus       223 ~~~~~~~~~~  232 (320)
                      ++++.++++.
T Consensus       213 ~~i~~~~~~~  222 (263)
T PRK09072        213 AAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHhCC
Confidence            9999999873

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.78  E-value=1.9e-17  Score=139.22  Aligned_cols=220  Identities=20%  Similarity=0.197  Sum_probs=144.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQ   76 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~   76 (320)
                      .+|+++||||+|.||++++++|.+.|   ++|++..++... ........+..+.++.+|++|.+++.++++.    +++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G---~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   85 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAG---CDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGH   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            36899999999999999999999999   888877765321 1112222344577889999999988877764    357


Q ss_pred             CCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh----cc-CceEEEeechhhhcccCCCCcccCCCCC
Q 020880           77 PDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE----NK-ENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        77 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +|++||+||.....    ....+++..+++|+.+++ .+++++..    .+ -.++|++||...+.+...          
T Consensus        86 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  154 (253)
T PRK08993         86 IDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVF-FMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR----------  154 (253)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHhCCCCeEEEEECchhhccCCCC----------
Confidence            99999999975432    223456788999999986 66666543    22 248999999987754321          


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+.+.+       +.++..++|+.+--+-.......   ........ ...+.       ..+.-.+|
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~---~~~~~~~~-~~~p~-------~r~~~p~e  223 (253)
T PRK08993        155 VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRAD---EQRSAEIL-DRIPA-------GRWGLPSD  223 (253)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccc---hHHHHHHH-hcCCC-------CCCcCHHH
Confidence            347999999999877754       23567799999865432100000   01111111 11111       12567899


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +|++++.++......  ..+.++.+.++
T Consensus       224 va~~~~~l~s~~~~~--~~G~~~~~dgg  249 (253)
T PRK08993        224 LMGPVVFLASSASDY--INGYTIAVDGG  249 (253)
T ss_pred             HHHHHHHHhCccccC--ccCcEEEECCC
Confidence            999999998754221  12446666554

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.1e-17  Score=143.94  Aligned_cols=207  Identities=16%  Similarity=0.132  Sum_probs=142.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC--CcceEEEeeCCCcccHHHHHHH----hC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--HSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      .+++++||||+|.||.++++.|.++|   ++|+++.|+.+....+.+.++  ..+..+.+|++|.+++.++++.    ++
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARG---AKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35799999999999999999999999   899999998776655544443  2344566999999988777654    36


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh---ccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE---NKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      .+|+|||+||.....    ...++.+..+++|+.+++ ++++++..   .+..+||++||...+.+..          ..
T Consensus        85 ~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~-~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~  153 (296)
T PRK05872         85 GIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVF-HTVRATLPALIERRGYVLQVSSLAAFAAAP----------GM  153 (296)
T ss_pred             CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCEEEEEeCHhhcCCCC----------Cc
Confidence            799999999975432    112234567889999986 77766643   1224899999988765432          25


Q ss_pred             chHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          149 NVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      ..|+.+|...+.+.+.+       +..+.++.|+.+..+-....... .  ..+.... ...+.+     ...++..+|+
T Consensus       154 ~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~-~--~~~~~~~-~~~~~p-----~~~~~~~~~v  224 (296)
T PRK05872        154 AAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD-L--PAFRELR-ARLPWP-----LRRTTSVEKC  224 (296)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc-c--hhHHHHH-hhCCCc-----ccCCCCHHHH
Confidence            68999999999988754       34567789988865432111000 0  1111111 111111     1235789999


Q ss_pred             HHHHHHHHhh
Q 020880          222 VKIILALTNR  231 (320)
Q Consensus       222 a~~~~~~~~~  231 (320)
                      |++++.++..
T Consensus       225 a~~i~~~~~~  234 (296)
T PRK05872        225 AAAFVDGIER  234 (296)
T ss_pred             HHHHHHHHhc
Confidence            9999999876

>PRK06484 short chain dehydrogenase; Validated

Probab=99.78  E-value=1.4e-17  Score=154.50  Aligned_cols=220  Identities=15%  Similarity=0.166  Sum_probs=152.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~d   78 (320)
                      +|++|||||+|.||.+++++|+++|   ++|+++.|+.++.+.+.+..+.....+.+|++|++++.++++.    ++.+|
T Consensus       269 ~k~~lItGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        269 PRVVAITGGARGIGRAVADRFAAAG---DRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD  345 (520)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999   8999999987766666555555566789999999998877754    36799


Q ss_pred             EEEECCCccCc-----cccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCCcchH
Q 020880           79 VVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVY  151 (320)
Q Consensus        79 ~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y  151 (320)
                      ++||+||....     ..+..+++..+++|+.+++ ++++++...  +..+||++||...+...          .+...|
T Consensus       346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~Y  414 (520)
T PRK06484        346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAF-ACARAAARLMSQGGVIVNLGSIASLLAL----------PPRNAY  414 (520)
T ss_pred             EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHH-HHHHHHHHHhccCCEEEEECchhhcCCC----------CCCchh
Confidence            99999997532     1223345678899999986 776666542  23489999998775432          235689


Q ss_pred             HHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHH
Q 020880          152 GKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI  224 (320)
Q Consensus       152 ~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  224 (320)
                      +.+|...+.+.+.+       +.++..++|+.|..+-....... . ...... +.+..++       ..+...+|+|++
T Consensus       415 ~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-~-~~~~~~-~~~~~~~-------~~~~~~~dia~~  484 (520)
T PRK06484        415 CASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKAS-G-RADFDS-IRRRIPL-------GRLGDPEEVAEA  484 (520)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccc-c-HHHHHH-HHhcCCC-------CCCcCHHHHHHH
Confidence            99999999887764       34567899999876532110000 0 001111 1111111       125689999999


Q ss_pred             HHHHHhhhhccccccCceeEecCC
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ++.++.....  ...+.++.+.++
T Consensus       485 ~~~l~s~~~~--~~~G~~i~vdgg  506 (520)
T PRK06484        485 IAFLASPAAS--YVNGATLTVDGG  506 (520)
T ss_pred             HHHHhCcccc--CccCcEEEECCC
Confidence            9999865321  123557888765

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4.5e-18  Score=142.94  Aligned_cols=206  Identities=13%  Similarity=0.163  Sum_probs=133.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-CChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----C--
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----G--   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~--   75 (320)
                      ||+|+||||+|+||++++++|+++|   ++|+++.|++ +....+.+..+.+++++.+|++|++++..+++..    +  
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   77 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKG---THVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQED   77 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcC---CEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence            4789999999999999999999999   8899999986 3333333333456788999999999988777643    1  


Q ss_pred             --CCCEEEECCCccCc-----cccccCchhhhhccccccH---HHHHhhhhhc-cCceEEEeechhhhcccCCCCcccCC
Q 020880           76 --QPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSL---VNWLSSFTEN-KENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        76 --~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~---~~~l~~~~~~-~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                        +..++||+||...+     ..+..+....+++|+.+.+   ..++..+++. +.+++|++||...+.+          
T Consensus        78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------  147 (251)
T PRK06924         78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP----------  147 (251)
T ss_pred             cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC----------
Confidence              12279999987533     1223345677888998864   1333444443 3458999999876432          


Q ss_pred             CCCcchHHHHHHHHHHHHHHHc---------CCeeEEeecccccCCCCC---CCCCCChHHHHHHHHhcCCceEeecCcc
Q 020880          145 IAPVNVYGKSKVAAEKFIYEKC---------SNFAILRSSIIYGPQTIS---PVPKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~~---------~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                      ..+...|+.+|...+.+++.+.         .++..++|+.+-.+....   .....+  ..+..... ..       ..
T Consensus       148 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~~~-~~-------~~  217 (251)
T PRK06924        148 YFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDF--TNLDRFIT-LK-------EE  217 (251)
T ss_pred             CCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccc--hHHHHHHH-Hh-------hc
Confidence            3346789999999999887542         235667888764332100   000000  00111000 00       01


Q ss_pred             cCceeHHHHHHHHHHHHhh
Q 020880          213 RCPVYVRDVVKIILALTNR  231 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~  231 (320)
                      ..+...+|+|+.++.++..
T Consensus       218 ~~~~~~~dva~~~~~l~~~  236 (251)
T PRK06924        218 GKLLSPEYVAKALRNLLET  236 (251)
T ss_pred             CCcCCHHHHHHHHHHHHhc
Confidence            1257899999999999876

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.7e-17  Score=144.15  Aligned_cols=200  Identities=14%  Similarity=0.147  Sum_probs=139.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHHh----C
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALKF----G   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----~   75 (320)
                      +++|+||||||.||.+++++|.++|   ++|++..|+++..+.+.+.   .+..+.++.+|++|++++.++++..    +
T Consensus         7 ~k~vlITGAs~GIG~aia~~la~~G---~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          7 GAVVVITGASSGIGQATAEAFARRG---ARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCEEEEcCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999999   8999999987665544332   2345667899999999988877543    5


Q ss_pred             CCCEEEECCCccCcccc----ccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPRVC----ENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++|++||+||.......    .++.+..+++|+.+++ ++.+++    ++.+..++|++||...+.+..          .
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~-~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p----------~  152 (330)
T PRK06139         84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYM-RDAHAALPIFKKQGHGIFINMISLGGFAAQP----------Y  152 (330)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHH-HHHHHHHHHHHHcCCCEEEEEcChhhcCCCC----------C
Confidence            79999999997543222    2234567899999986 655554    444445899999987664321          2


Q ss_pred             cchHHHHHHHHHHHHHHH----c----CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          148 VNVYGKSKVAAEKFIYEK----C----SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~----~----~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      ...|+.+|...+.+.+.+    .    .++..+.|+.+..+......      ...      +...    .....+++.+
T Consensus       153 ~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~------~~~------~~~~----~~~~~~~~pe  216 (330)
T PRK06139        153 AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA------NYT------GRRL----TPPPPVYDPR  216 (330)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc------ccc------cccc----cCCCCCCCHH
Confidence            468999999876655543    2    34567889888776421100      000      0000    0011257899


Q ss_pred             HHHHHHHHHHhhh
Q 020880          220 DVVKIILALTNRW  232 (320)
Q Consensus       220 D~a~~~~~~~~~~  232 (320)
                      |+|++++.+++++
T Consensus       217 ~vA~~il~~~~~~  229 (330)
T PRK06139        217 RVAKAVVRLADRP  229 (330)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999874

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.77  E-value=1.5e-17  Score=157.17  Aligned_cols=226  Identities=13%  Similarity=0.187  Sum_probs=146.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----C-CcceEEEeeCCCcccHHHHHHH---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----P-HSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      .+|++|||||+|+||++++++|+++|   ++|+++.|+.+........+    + ..+..+.+|++|++++.++++.   
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~G---a~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEG---AHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999   89999999866554433321    1 2456789999999988777754   


Q ss_pred             -hCCCCEEEECCCccCcccc----ccCchhhhhccccccHHHH----Hhhhhhcc-CceEEEeechhhhcccCCCCcccC
Q 020880           74 -FGQPDVVVNCAALSVPRVC----ENDPDSAMSINVPSSLVNW----LSSFTENK-ENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~~~----l~~~~~~~-~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                       ++++|+|||+||.......    ..++...+++|+.+.+ .+    +..+++.+ ..++|++||...+.+.        
T Consensus       490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~-~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~--------  560 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYF-LVAREAFRQMREQGLGGNIVFIASKNAVYAG--------  560 (676)
T ss_pred             hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCCEEEEEeChhhcCCC--------
Confidence             4579999999997543221    2234566778888764 33    34444443 2489999997654322        


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccc-cCCCCCCC--CCC-----ChHHHHHHHHhcCCceEee
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIY-GPQTISPV--PKS-----LPIQWIDSVLSKGEKVEFF  208 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~-G~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~  208 (320)
                        .....|+.+|...+.+++.+       +.++..++|+.|+ |.+.....  ...     .....+.......      
T Consensus       561 --~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r------  632 (676)
T TIGR02632       561 --KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKR------  632 (676)
T ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhc------
Confidence              13568999999999988764       2355778998886 33211000  000     0000000111111      


Q ss_pred             cCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          209 HDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       209 ~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                       .....+++.+|+|+++..++.....  ...+.++++.+|..
T Consensus       633 -~~l~r~v~peDVA~av~~L~s~~~~--~~TG~~i~vDGG~~  671 (676)
T TIGR02632       633 -TLLKRHIFPADIAEAVFFLASSKSE--KTTGCIITVDGGVP  671 (676)
T ss_pred             -CCcCCCcCHHHHHHHHHHHhCCccc--CCcCcEEEECCCch
Confidence             1123578999999999988764322  12345899988754

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.77  E-value=6.3e-18  Score=142.96  Aligned_cols=225  Identities=16%  Similarity=0.079  Sum_probs=145.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      ++++++||||+|+||++++++|+++|   ++|+++.|+.+..+.+....+..+.++.+|++|.+++.++++.    ++++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEG---ARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999   8999999987666555444445677889999998887766653    4689


Q ss_pred             CEEEECCCccCcc-----ccc----cCchhhhhccccccHHHHHhhhhhc---cCceEEEeechhhhcccCCCCcccCCC
Q 020880           78 DVVVNCAALSVPR-----VCE----NDPDSAMSINVPSSLVNWLSSFTEN---KENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        78 d~Vih~a~~~~~~-----~~~----~~~~~~~~~n~~~~~~~~l~~~~~~---~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      |++||+||.....     ...    .+++..+++|+.+++ .+++++...   ...++|++||...+.+.          
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~g~iv~~sS~~~~~~~----------  149 (262)
T TIGR03325        81 DCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYL-LAVKAALPALVASRGSVIFTISNAGFYPN----------  149 (262)
T ss_pred             CEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHH-HHHHHHHHHHhhcCCCEEEEeccceecCC----------
Confidence            9999999864211     011    134578899999986 777777542   12478998887654221          


Q ss_pred             CCcchHHHHHHHHHHHHHHHcC------CeeEEeecccccCCCCCC-C--CCCCh-HHHHHHHHhcCCceEeecCcccCc
Q 020880          146 APVNVYGKSKVAAEKFIYEKCS------NFAILRSSIIYGPQTISP-V--PKSLP-IQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~~------~~~ilR~~~v~G~~~~~~-~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                      .....|+.+|...+.+.+.+..      ++..+.|+.+..+-.... .  ..... .......+....+       ...+
T Consensus       150 ~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~  222 (262)
T TIGR03325       150 GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLP-------IGRM  222 (262)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCC-------CCCC
Confidence            1245799999999998876532      345688888865422100 0  00000 0001111111111       1235


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ...+|+|++++.++...... ...+.++.+.+|
T Consensus       223 ~~p~eva~~~~~l~s~~~~~-~~tG~~i~vdgg  254 (262)
T TIGR03325       223 PDAEEYTGAYVFFATRGDTV-PATGAVLNYDGG  254 (262)
T ss_pred             CChHHhhhheeeeecCCCcc-cccceEEEecCC
Confidence            67899999998887642110 112346777665

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.77  E-value=6.6e-18  Score=141.24  Aligned_cols=160  Identities=19%  Similarity=0.215  Sum_probs=117.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH-----h---
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK-----F---   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~---   74 (320)
                      ||+++||||||+||++++++|+++|   ++|+++.|+.++.  .....+.++.++.+|++|.+++.+++..     +   
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G---~~v~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   75 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPG---IAVLGVARSRHPS--LAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG   75 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCC---CEEEEEecCcchh--hhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence            4689999999999999999999999   8899999876532  1222344677899999999988875542     2   


Q ss_pred             CCCCEEEECCCccCcc--c---cccCchhhhhccccccHHHHHhh----hhhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVPR--V---CENDPDSAMSINVPSSLVNWLSS----FTENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~--~---~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ..+|++||+||...+.  .   ...+++..+++|+.+.+ .+.+.    +.+.+.+++|++||...+.+.          
T Consensus        76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  144 (243)
T PRK07023         76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPL-MLTAALAQAASDAAERRILHISSGAARNAY----------  144 (243)
T ss_pred             CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHH-HHHHHHHHHhhccCCCEEEEEeChhhcCCC----------
Confidence            2589999999975431  1   12334677889999864 44443    344455699999998876432          


Q ss_pred             CCcchHHHHHHHHHHHHHHHc------CCeeEEeecccc
Q 020880          146 APVNVYGKSKVAAEKFIYEKC------SNFAILRSSIIY  178 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~------~~~~ilR~~~v~  178 (320)
                      .+...|+.+|...|.+++.+.      .++.+++|+.+-
T Consensus       145 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~  183 (243)
T PRK07023        145 AGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVD  183 (243)
T ss_pred             CCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccc
Confidence            346789999999999888653      345667887763

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.1e-17  Score=138.71  Aligned_cols=199  Identities=14%  Similarity=0.099  Sum_probs=134.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh-------hh---hhhCCCcceEEEeeCCCcccHHHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-------LL---LDALPHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~-------~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      +++++||||+|+||+++++.|+++|   ++|+++.|+.++..       ..   ....+.++.++.+|+++++++.++++
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          6 GKTLFITGASRGIGLAIALRAARDG---ANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            5799999999999999999999999   89999998765321       11   11223467788999999998877765


Q ss_pred             H----hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCc
Q 020880           73 K----FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYK  140 (320)
Q Consensus        73 ~----~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~  140 (320)
                      .    ++++|+|||+||...+..    ..++++..+++|+.+++ ++++++..    .+-.++|++||.....+.     
T Consensus        83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~-~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----  156 (273)
T PRK08278         83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTF-LVSQACLPHLKKSENPHILTLSPPLNLDPK-----  156 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHH-HHHHHHHHHHHhcCCCEEEEECCchhcccc-----
Confidence            4    358999999999754322    22334667889999986 77777753    223489999886432111     


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCccc
Q 020880          141 EEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       141 E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                         ...+...|+.+|...|.+++.+.       .++..+.|+.++...            ...... .+..      ...
T Consensus       157 ---~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~------------~~~~~~-~~~~------~~~  214 (273)
T PRK08278        157 ---WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA------------AVRNLL-GGDE------AMR  214 (273)
T ss_pred             ---ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH------------HHHhcc-cccc------ccc
Confidence               11346789999999999888653       344567776322111            111111 1110      112


Q ss_pred             CceeHHHHHHHHHHHHhhh
Q 020880          214 CPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~  232 (320)
                      .+...+|+|++++.++...
T Consensus       215 ~~~~p~~va~~~~~l~~~~  233 (273)
T PRK08278        215 RSRTPEIMADAAYEILSRP  233 (273)
T ss_pred             ccCCHHHHHHHHHHHhcCc
Confidence            3578899999999998764

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=2.6e-17  Score=137.15  Aligned_cols=212  Identities=14%  Similarity=0.048  Sum_probs=141.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC--CCcceEEEeeCCCcccHHHHHHH----hCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFDVDLKSGSGFDAVALK----FGQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~----~~~   76 (320)
                      +++||||||+|+||+++++.|+++|   ++|++++|+++....+....  ..+++++.+|+++++++.++++.    ++.
T Consensus         5 ~~~vlItGa~g~iG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          5 GKKVAIIGVSEGLGYAVAYFALKEG---AQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999   89999999876554432222  13577899999999988877654    345


Q ss_pred             CCEEEECCCccCcc--ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhh-hcccCCCCcccCCCCCcchH
Q 020880           77 PDVVVNCAALSVPR--VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQV-YEGVKSFYKEEDEIAPVNVY  151 (320)
Q Consensus        77 ~d~Vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~v-y~~~~~~~~E~~~~~p~~~Y  151 (320)
                      +|.+||+++.....  ....+.+..++.|+.+.+ .+++.+...  ...++|++||... ++.          ..+...|
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------~~~~~~Y  150 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPL-YAVNASLRFLKEGSSIVLVSSMSGIYKA----------SPDQLSY  150 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHH-HHHHHHHHHHhcCCEEEEEecchhcccC----------CCCchHH
Confidence            79999999864321  111234566788888875 555555432  1237999998754 221          1235679


Q ss_pred             HHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHH
Q 020880          152 GKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI  224 (320)
Q Consensus       152 ~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  224 (320)
                      +.+|...+.+++.+       +.+++++||+.++++-..    .    ..+.. .   ...      ...++..+|++++
T Consensus       151 ~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~----~----~~~~~-~---~~~------~~~~~~~~~va~~  212 (238)
T PRK05786        151 AVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEP----E----RNWKK-L---RKL------GDDMAPPEDFAKV  212 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCc----h----hhhhh-h---ccc------cCCCCCHHHHHHH
Confidence            99999998766543       457889999999987421    0    00110 0   000      0124678999999


Q ss_pred             HHHHHhhhhccccccCceeEecCC
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +.+++..+..  ...+..+.+.++
T Consensus       213 ~~~~~~~~~~--~~~g~~~~~~~~  234 (238)
T PRK05786        213 IIWLLTDEAD--WVDGVVIPVDGG  234 (238)
T ss_pred             HHHHhccccc--CccCCEEEECCc
Confidence            9999875322  112445666543

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.76  E-value=7.5e-17  Score=136.32  Aligned_cols=221  Identities=14%  Similarity=0.110  Sum_probs=143.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhh---hCCCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      .+|+++||||+|.||.++++.|+++|   +.|+...|+... .....+   ..+..+.++.+|++|.+++.++++.    
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G---~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEK---AKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999   788887786432 222222   1234566789999999988776653    


Q ss_pred             hCCCCEEEECCCccCcccc----ccCchhhhhccccccH---HHHHhhhhhcc-CceEEEeechhhhcccCCCCcccCCC
Q 020880           74 FGQPDVVVNCAALSVPRVC----ENDPDSAMSINVPSSL---VNWLSSFTENK-ENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~---~~~l~~~~~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++.+|++||+||...+...    ..+++..+++|+.+.+   ..+++.+.+.+ -.++|++||...+.          +.
T Consensus        83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~----------~~  152 (261)
T PRK08936         83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI----------PW  152 (261)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC----------CC
Confidence            3579999999997543221    2334567889988774   13444555544 24899999975432          22


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+.+.+       +.++.+++|+.+..+........  . .... ......+.       ..+...
T Consensus       153 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~-~~~~-~~~~~~~~-------~~~~~~  221 (261)
T PRK08936        153 PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD--P-KQRA-DVESMIPM-------GYIGKP  221 (261)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC--H-HHHH-HHHhcCCC-------CCCcCH
Confidence            34568999998888766654       34567899999977643211111  1 1111 11111111       235678


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +|+++++.+++.....  ...+..+.+.++
T Consensus       222 ~~va~~~~~l~s~~~~--~~~G~~i~~d~g  249 (261)
T PRK08936        222 EEIAAVAAWLASSEAS--YVTGITLFADGG  249 (261)
T ss_pred             HHHHHHHHHHcCcccC--CccCcEEEECCC
Confidence            9999999998875321  223445666654

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.76  E-value=4.1e-17  Score=137.84  Aligned_cols=222  Identities=14%  Similarity=0.109  Sum_probs=139.4

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-CChhhhhh----hCCCcceEEEeeCCCcccHHHHHHH--
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLD----ALPHSFVFFDVDLKSGSGFDAVALK--   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~--   73 (320)
                      |++|++|||||+|.||.+++++|+++|   ++|+...|+. +.......    ..+..+.++.+|++|+++++++++.  
T Consensus         6 l~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          6 MKGKTLVISGGTRGIGKAIVYEFAQSG---VNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            346899999999999999999999999   7888776643 22222222    1234577899999999998877764  


Q ss_pred             --hCCCCEEEECCCccCc-------c---ccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCC
Q 020880           74 --FGQPDVVVNCAALSVP-------R---VCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSF  138 (320)
Q Consensus        74 --~~~~d~Vih~a~~~~~-------~---~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~  138 (320)
                        ++++|++||+||....       +   .........+++|+.+.+   ..++..+++.+..+||++||...+...   
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  159 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI---  159 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC---
Confidence              3579999999986421       1   111233456777877654   133444444444599999997543211   


Q ss_pred             CcccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCc
Q 020880          139 YKEEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDE  211 (320)
Q Consensus       139 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (320)
                             .....|+.+|...+.+++.+.       .++..+.||.+--+-... ... . .. +........+.      
T Consensus       160 -------~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~-~~~-~-~~-~~~~~~~~~~~------  222 (260)
T PRK08416        160 -------ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKA-FTN-Y-EE-VKAKTEELSPL------  222 (260)
T ss_pred             -------CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhh-ccC-C-HH-HHHHHHhcCCC------
Confidence                   124579999999999887643       456778888774331100 000 0 01 11111111121      


Q ss_pred             ccCceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          212 CRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       212 ~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                       ..+...+|+|.++++++.....  ...+..+.+.++
T Consensus       223 -~r~~~p~~va~~~~~l~~~~~~--~~~G~~i~vdgg  256 (260)
T PRK08416        223 -NRMGQPEDLAGACLFLCSEKAS--WLTGQTIVVDGG  256 (260)
T ss_pred             -CCCCCHHHHHHHHHHHcChhhh--cccCcEEEEcCC
Confidence             1357899999999999865321  123447777665

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.76  E-value=6.6e-17  Score=136.96  Aligned_cols=225  Identities=12%  Similarity=0.110  Sum_probs=143.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----C-CcceEEEeeCCCcccHHHHHHH----
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----P-HSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      +++++||||+|.||.+++++|+++|   ++|+++.|+.++.....+..    + ..+.++.+|++|.+++.++++.    
T Consensus         8 ~k~~lItGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          8 GRVAVVTGGSSGIGLATVELLLEAG---ASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4789999999999999999999999   88999999876654433322    1 2566789999999988777654    


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++++|++||+||.....    ....++...+++|+.+.+   ..++..+++.+..++|++||...+.+..          
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  154 (265)
T PRK07062         85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEP----------  154 (265)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCC----------
Confidence            36799999999975321    122234566788887764   1334444445556999999987654321          


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCC-----CCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPV-----PKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                      ....|+.+|...+.+.+.+       +.++..++|+.+-.+......     .......+..... .....+     ...
T Consensus       155 ~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p-----~~r  228 (265)
T PRK07062        155 HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALA-RKKGIP-----LGR  228 (265)
T ss_pred             CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHh-hcCCCC-----cCC
Confidence            2457999999988876643       345678999888554211000     0000011111111 001111     123


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +...+|+|.++..++.....  -..+.++.+.+|
T Consensus       229 ~~~p~~va~~~~~L~s~~~~--~~tG~~i~vdgg  260 (265)
T PRK07062        229 LGRPDEAARALFFLASPLSS--YTTGSHIDVSGG  260 (265)
T ss_pred             CCCHHHHHHHHHHHhCchhc--ccccceEEEcCc
Confidence            56789999999998864321  123447777665

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.76  E-value=5.2e-17  Score=137.37  Aligned_cols=219  Identities=16%  Similarity=0.142  Sum_probs=145.5

Q ss_pred             CCCcEEEEEcCCC-hhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh----CC-CcceEEEeeCCCcccHHHHHHH-
Q 020880            1 MSKKRVLVVGGTG-YLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA----LP-HSFVFFDVDLKSGSGFDAVALK-   73 (320)
Q Consensus         1 m~~~~ilItGatG-~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~----~~-~~~~~~~~Dl~d~~~~~~~~~~-   73 (320)
                      |.+++++||||+| -||+++++.|+++|   ++|++..|+.++.....+.    .+ .++.++.+|+++++++.++++. 
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   91 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEG---ARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA   91 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            3468999999998 59999999999999   7899888876554443322    22 3577889999999988877754 


Q ss_pred             ---hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hcc-CceEEEeechhhhcccCCCCcc
Q 020880           74 ---FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENK-ENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        74 ---~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~-~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                         ++.+|+|||+||.....    ....++...+++|+.+.+ .+++++.    +.+ ..++|++||...+..       
T Consensus        92 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~-------  163 (262)
T PRK07831         92 VERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTF-RATRAALRYMRARGHGGVIVNNASVLGWRA-------  163 (262)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCcEEEEeCchhhcCC-------
Confidence               35789999999975322    112344567788998875 5555543    232 348999888765422       


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                         ..+...|+.+|...+.+.+.+.       .++.+++|+.+..+.....    .....+.. +....++       ..
T Consensus       164 ---~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~----~~~~~~~~-~~~~~~~-------~r  228 (262)
T PRK07831        164 ---QHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV----TSAELLDE-LAAREAF-------GR  228 (262)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc----cCHHHHHH-HHhcCCC-------CC
Confidence               1245689999999999887653       3567899999887642111    11122222 2222222       13


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG  247 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~  247 (320)
                      +...+|+|++++.++......  ..+.++.+.+
T Consensus       229 ~~~p~~va~~~~~l~s~~~~~--itG~~i~v~~  259 (262)
T PRK07831        229 AAEPWEVANVIAFLASDYSSY--LTGEVVSVSS  259 (262)
T ss_pred             CcCHHHHHHHHHHHcCchhcC--cCCceEEeCC
Confidence            567899999999988764211  1244666654

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.76  E-value=1.9e-17  Score=140.40  Aligned_cols=220  Identities=16%  Similarity=0.238  Sum_probs=143.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----CCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----GQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~~   77 (320)
                      ++|+++||||+|+||.++++.|+++|   ++|+...|++....      ...+.++.+|++|++++.++++.+    +.+
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G---~~v~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANG---ANVVNADIHGGDGQ------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRI   78 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCccccc------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999   88998888765432      135677899999999988776643    579


Q ss_pred             CEEEECCCccCcc-------------ccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCc
Q 020880           78 DVVVNCAALSVPR-------------VCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYK  140 (320)
Q Consensus        78 d~Vih~a~~~~~~-------------~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~  140 (320)
                      |+|||+||...+.             ...++++..+++|+.+++ .+++++..    .+..++|++||...+.+.     
T Consensus        79 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  152 (266)
T PRK06171         79 DGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVF-LMSQAVARQMVKQHDGVIVNMSSEAGLEGS-----  152 (266)
T ss_pred             CEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHH-HHHHHHHHHHHhcCCcEEEEEccccccCCC-----
Confidence            9999999974321             122344667899999986 77766653    334589999998765432     


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeeccccc-CCCCCCCC------CCChHHHHHHHHhcCCceE
Q 020880          141 EEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYG-PQTISPVP------KSLPIQWIDSVLSKGEKVE  206 (320)
Q Consensus       141 E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G-~~~~~~~~------~~~~~~~~~~~~~~~~~~~  206 (320)
                           .....|+.+|...+.+++.+.       .++.+++|+.+-- +-......      .......+..........+
T Consensus       153 -----~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  227 (266)
T PRK06171        153 -----EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIP  227 (266)
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccccc
Confidence                 235689999999999877653       4567799988741 11100000      0000001111111100111


Q ss_pred             eecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          207 FFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       207 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                           ...+...+|+|.++..++.....  -..+.++++.+|
T Consensus       228 -----~~r~~~~~eva~~~~fl~s~~~~--~itG~~i~vdgg  262 (266)
T PRK06171        228 -----LGRSGKLSEVADLVCYLLSDRAS--YITGVTTNIAGG  262 (266)
T ss_pred             -----CCCCCCHHHhhhheeeeeccccc--cceeeEEEecCc
Confidence                 12357789999999998865321  123447777665

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=1.2e-16  Score=134.15  Aligned_cols=219  Identities=13%  Similarity=0.065  Sum_probs=141.9

Q ss_pred             CCcEEEEEcCC--ChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-CCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGT--GYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-PHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGat--G~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+|+++||||+  +-||..++++|+++|   ++|+...|+. +........ ...+.++.+|++|++++.++++.    +
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G---~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQG---ATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCC---CEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            36899999999  799999999999999   8899888873 322222222 23567789999999988776654    4


Q ss_pred             CCCCEEEECCCccCc--------cccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCC
Q 020880           75 GQPDVVVNCAALSVP--------RVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      +++|++||+||...+        +....+++..+++|+.+.+ .+.+++...  +-.++|++||.......         
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~-~l~~~~~~~~~~~g~Iv~iss~~~~~~~---------  151 (252)
T PRK06079         82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLI-AVAKYARPLLNPGASIVTLTYFGSERAI---------  151 (252)
T ss_pred             CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHH-HHHHHHHHhcccCceEEEEeccCccccC---------
Confidence            679999999997532        1122345677889998875 555555321  12489999987643211         


Q ss_pred             CCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       .....|+.+|...+.+.+.+.       .++..+.||.|-.+-.... ..  ....... .....+.       ..+..
T Consensus       152 -~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~-~~--~~~~~~~-~~~~~p~-------~r~~~  219 (252)
T PRK06079        152 -PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGI-KG--HKDLLKE-SDSRTVD-------GVGVT  219 (252)
T ss_pred             -CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccC-CC--hHHHHHH-HHhcCcc-------cCCCC
Confidence             125689999999999887643       3567799998855421100 00  0111111 1111111       13677


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      .+|+|+++..++......  ..+.++.+.++
T Consensus       220 pedva~~~~~l~s~~~~~--itG~~i~vdgg  248 (252)
T PRK06079        220 IEEVGNTAAFLLSDLSTG--VTGDIIYVDKG  248 (252)
T ss_pred             HHHHHHHHHHHhCccccc--ccccEEEeCCc
Confidence            899999999998653221  12446666654

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1e-16  Score=135.34  Aligned_cols=223  Identities=13%  Similarity=0.093  Sum_probs=147.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----CCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      +|+++||||+|.||.++++.|+++|   ++|++++|++++.....+.+    +.++.++.+|++|++++.++++.++.+|
T Consensus         7 ~k~vlItG~~~giG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          7 GKRVLITGASKGIGAAAAEAFAAEG---CHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            4899999999999999999999999   89999999876554433322    3457788999999999999998887899


Q ss_pred             EEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           79 VVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        79 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      ++||+||.....    ...++.+..+++|+.+.+ .+++++    .+.+..++|++||.....+          ..+...
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~g~iv~iss~~~~~~----------~~~~~~  152 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYI-DLTRLAYPRMKARGSGVIVNVIGAAGENP----------DADYIC  152 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCcEEEEecCccccCC----------CCCchH
Confidence            999999975321    122344677889999875 555554    4444448999988754311          123457


Q ss_pred             HHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCC----CCC-hHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          151 YGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVP----KSL-PIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      |+.+|...+.+.+..       +.++..++||.+-.+.......    ..+ ....... .....+       ...+...
T Consensus       153 y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~  224 (259)
T PRK06125        153 GSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQE-LLAGLP-------LGRPATP  224 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHH-HhccCC-------cCCCcCH
Confidence            899999999887764       3456779998876542100000    000 0000000 001111       1235789


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|+|++++.++.....  ...+..+.+.+|.
T Consensus       225 ~~va~~~~~l~~~~~~--~~~G~~i~vdgg~  253 (259)
T PRK06125        225 EEVADLVAFLASPRSG--YTSGTVVTVDGGI  253 (259)
T ss_pred             HHHHHHHHHHcCchhc--cccCceEEecCCe
Confidence            9999999998864321  2234577777653

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.3e-17  Score=137.59  Aligned_cols=196  Identities=19%  Similarity=0.194  Sum_probs=133.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----CCcceEEEeeCCCc--ccHHHHHH--
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDLKSG--SGFDAVAL--   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~--~~~~~~~~--   72 (320)
                      |.+++++||||+|+||++++++|+++|   ++|+++.|+.+......+.+    .....++.+|+.+.  +++.++++  
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i   80 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAG---ATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATI   80 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcC---CEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHH
Confidence            345899999999999999999999999   89999999876554443322    22456788999763  34444433  


Q ss_pred             --Hh-CCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCc
Q 020880           73 --KF-GQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYK  140 (320)
Q Consensus        73 --~~-~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~  140 (320)
                        .+ +.+|+|||+||....     .....++...+++|+.+++ ++++++.    +.+..++|++||.....+      
T Consensus        81 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~-~l~~~~~~~~~~~~~~~iv~~ss~~~~~~------  153 (239)
T PRK08703         81 AEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPM-GLTRALFPLLKQSPDASVIFVGESHGETP------  153 (239)
T ss_pred             HHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHH-HHHHHHHHHHHhCCCCEEEEEeccccccC------
Confidence              23 478999999996422     1112334567899999985 6666553    344558999998654321      


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHc--------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcc
Q 020880          141 EEDEIAPVNVYGKSKVAAEKFIYEKC--------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       141 E~~~~~p~~~Y~~sK~~~e~~~~~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                          ......|+.+|...+.+++.+.        .++.+++||.|.++......+              +       ...
T Consensus       154 ----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~--------------~-------~~~  208 (239)
T PRK08703        154 ----KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHP--------------G-------EAK  208 (239)
T ss_pred             ----CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCC--------------C-------CCc
Confidence                1234579999999999876542        345679999998875311000              0       001


Q ss_pred             cCceeHHHHHHHHHHHHhh
Q 020880          213 RCPVYVRDVVKIILALTNR  231 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~  231 (320)
                      ..+...+|++..+..++..
T Consensus       209 ~~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        209 SERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             cccCCHHHHHHHHHHHhCc
Confidence            1246789999999988874

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.75  E-value=1.2e-16  Score=135.61  Aligned_cols=218  Identities=16%  Similarity=0.213  Sum_probs=139.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-CChhhhhhhC----CCcceEEEeeCCCcccHH----HHH---
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLDAL----PHSFVFFDVDLKSGSGFD----AVA---   71 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~----~~~---   71 (320)
                      +.++||||+|+||++++++|+++|   ++|+++.|+. +....+.+.+    +....++.+|++|.+++.    +++   
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G---~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~   78 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEG---YRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDAC   78 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCC---CeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHH
Confidence            579999999999999999999999   8888877653 3333333222    234556889999987553    332   


Q ss_pred             -HHhCCCCEEEECCCccCcccc-cc--------------CchhhhhccccccHHHHHhhhhhcc----------CceEEE
Q 020880           72 -LKFGQPDVVVNCAALSVPRVC-EN--------------DPDSAMSINVPSSLVNWLSSFTENK----------ENLLIH  125 (320)
Q Consensus        72 -~~~~~~d~Vih~a~~~~~~~~-~~--------------~~~~~~~~n~~~~~~~~l~~~~~~~----------~~~~v~  125 (320)
                       +.++++|+|||+||...+... ..              +....+++|+.+++ .+.+++....          ..++|+
T Consensus        79 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~~~~~~~~~~iv~  157 (267)
T TIGR02685        79 FRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPY-FLIKAFAQRQAGTRAEQRSTNLSIVN  157 (267)
T ss_pred             HHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHH-HHHHHHHHHhhhcccccCCCCeEEEE
Confidence             334679999999997543111 11              13466899999886 6666543211          136888


Q ss_pred             eechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHH
Q 020880          126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSV  198 (320)
Q Consensus       126 ~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~  198 (320)
                      +||.....          +..+...|+.+|...+.+++.+       +.++..++|+.+..+...   ..    . ....
T Consensus       158 ~~s~~~~~----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~---~~----~-~~~~  219 (267)
T TIGR02685       158 LCDAMTDQ----------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM---PF----E-VQED  219 (267)
T ss_pred             ehhhhccC----------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc---ch----h-HHHH
Confidence            87765432          1234668999999999988764       346788999998655321   11    1 1111


Q ss_pred             HhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          199 LSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       199 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      .....++.      ..+...+|++++++.++.....  ...+..+.+.++..+
T Consensus       220 ~~~~~~~~------~~~~~~~~va~~~~~l~~~~~~--~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       220 YRRKVPLG------QREASAEQIADVVIFLVSPKAK--YITGTCIKVDGGLSL  264 (267)
T ss_pred             HHHhCCCC------cCCCCHHHHHHHHHHHhCcccC--CcccceEEECCceec
Confidence            11111110      1246789999999998875321  123557777766443

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.74  E-value=9.5e-17  Score=136.51  Aligned_cols=205  Identities=14%  Similarity=0.116  Sum_probs=135.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---C-CcceEEEeeCCCcccHHHHHHH----hC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---P-HSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      |+++||||||.||.+++++|+++|   ++|+++.|+++..+...+.+   + ..+.++.+|++|++++.++++.    ++
T Consensus         1 k~vlItGas~giG~~la~~la~~G---~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQG---AELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHG   77 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            579999999999999999999999   88988888865544433221   1 2345578999999987766654    35


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----h-ccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----E-NKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~-~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|+|||+||.....    ....+.+..+++|+.+++ .+++++.    + ....++|++||...+.+.          .
T Consensus        78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~----------~  146 (272)
T PRK07832         78 SMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPI-HVIETFVPPMVAAGRGGHLVNVSSAAGLVAL----------P  146 (272)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhCCCCcEEEEEccccccCCC----------C
Confidence            689999999975332    222344677899999986 7777753    2 223489999997654221          1


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCC--ChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKS--LPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      ....|+.+|...+.+.+..       +.++++++||.+.++.........  ...........   .+      ....+.
T Consensus       147 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~  217 (272)
T PRK07832        147 WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD---RF------RGHAVT  217 (272)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH---hc------ccCCCC
Confidence            2457999999887766543       456788999999876432100000  00000000000   00      112478


Q ss_pred             HHHHHHHHHHHHhh
Q 020880          218 VRDVVKIILALTNR  231 (320)
Q Consensus       218 v~D~a~~~~~~~~~  231 (320)
                      .+|+|++++.++..
T Consensus       218 ~~~vA~~~~~~~~~  231 (272)
T PRK07832        218 PEKAAEKILAGVEK  231 (272)
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999999965

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=5.8e-17  Score=135.84  Aligned_cols=195  Identities=17%  Similarity=0.159  Sum_probs=132.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----CCcceEEEeeCC--CcccHHHHHH---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDLK--SGSGFDAVAL---   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~--d~~~~~~~~~---   72 (320)
                      ..++|+||||+|+||.+++++|++.|   ++|+++.|+.++...+...+    .....++.+|++  +.+++.++++   
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G---~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHG---ATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999   89999999876554443322    234567778886  5555554443   


Q ss_pred             -HhCCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCccc
Q 020880           73 -KFGQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        73 -~~~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                       .++++|+|||+|+....     ......++..+++|+.+++ ++++++    .+.+.++||++||.....+.       
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~-~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-------  159 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATF-MLTQALLPLLLKSPAASLVFTSSSVGRQGR-------  159 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHH-HHHHHHHHHHHhCCCCEEEEEccHhhcCCC-------
Confidence             33579999999987533     1122345678899999985 666665    44566799999998654321       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                         .....|+.+|...+.+++.+.       .++.+++|+.+-.+-...         .+     ...       ....+
T Consensus       160 ---~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~---------~~-----~~~-------~~~~~  215 (247)
T PRK08945        160 ---ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS---------AF-----PGE-------DPQKL  215 (247)
T ss_pred             ---CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh---------hc-----Ccc-------cccCC
Confidence               124579999999999877642       234567777664432100         00     000       01135


Q ss_pred             eeHHHHHHHHHHHHhh
Q 020880          216 VYVRDVVKIILALTNR  231 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~  231 (320)
                      .-.+|+++++.+++..
T Consensus       216 ~~~~~~~~~~~~~~~~  231 (247)
T PRK08945        216 KTPEDIMPLYLYLMGD  231 (247)
T ss_pred             CCHHHHHHHHHHHhCc
Confidence            6789999999998754

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.73  E-value=2.9e-16  Score=132.54  Aligned_cols=224  Identities=12%  Similarity=0.042  Sum_probs=139.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC--CCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      |+++||||+|.||++++++|+++|   ++|+...|+++......+.+  ...+.++.+|++|+++++++++.    ++++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i   77 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKG---ARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGI   77 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            589999999999999999999999   88999999876554443332  13567889999999998877753    4689


Q ss_pred             CEEEECCCccCcc---c---cccCchhhhhccccccH---HHHHhhhh-hccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           78 DVVVNCAALSVPR---V---CENDPDSAMSINVPSSL---VNWLSSFT-ENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        78 d~Vih~a~~~~~~---~---~~~~~~~~~~~n~~~~~---~~~l~~~~-~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      |+|||+||.....   .   ...+....+.+|+.+.+   ..++..+. +.+..+||++||.....+.          .+
T Consensus        78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~----------~~  147 (259)
T PRK08340         78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM----------PP  147 (259)
T ss_pred             CEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCC----------CC
Confidence            9999999974311   1   11233445677877653   12333332 2334589999998765321          23


Q ss_pred             cchHHHHHHHHHHHHHHHcC-------CeeEEeecccccCCCCCCCC------CCChHHHHHHHHhcCCceEeecCcccC
Q 020880          148 VNVYGKSKVAAEKFIYEKCS-------NFAILRSSIIYGPQTISPVP------KSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                      ...|+.+|...+.+.+.+..       ++..+.|+.+-.+.......      ...........+....+       ...
T Consensus       148 ~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r  220 (259)
T PRK08340        148 LVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTP-------LKR  220 (259)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCC-------ccC
Confidence            56899999999998877533       34557777664432100000      00000000000101111       123


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +...+|+|+++..++.....  ...+.++.+.+|.
T Consensus       221 ~~~p~dva~~~~fL~s~~~~--~itG~~i~vdgg~  253 (259)
T PRK08340        221 TGRWEELGSLIAFLLSENAE--YMLGSTIVFDGAM  253 (259)
T ss_pred             CCCHHHHHHHHHHHcCcccc--cccCceEeecCCc
Confidence            57789999999998875321  1234466776653

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=4.4e-16  Score=131.19  Aligned_cols=214  Identities=16%  Similarity=0.126  Sum_probs=137.8

Q ss_pred             CcEEEEEcCCC--hhhHHHHHHHhhccCCCceEEEecCCC-----------CChhhh---hhhCCCcceEEEeeCCCccc
Q 020880            3 KKRVLVVGGTG--YLGQHLLQGLSEIEGKPYDVAATHHST-----------PLPQLL---LDALPHSFVFFDVDLKSGSG   66 (320)
Q Consensus         3 ~~~ilItGatG--~IG~~l~~~L~~~g~~v~~v~~~~r~~-----------~~~~~~---~~~~~~~~~~~~~Dl~d~~~   66 (320)
                      +|+|+||||||  .||.+++++|+++|   ++|+...|..           +....+   ....+..+.++.+|++|.++
T Consensus         6 ~k~vlVtGas~~~giG~~~a~~l~~~G---~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          6 NKVAVVTGVSRLDGIGAAICKELAEAG---ADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcEEEEECCCCCCChHHHHHHHHHHCC---CeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            68999999996  79999999999999   7787764321           011111   11223457788999999999


Q ss_pred             HHHHHHH----hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHH----HhhhhhccCceEEEeechhhhcc
Q 020880           67 FDAVALK----FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNW----LSSFTENKENLLIHLSTDQVYEG  134 (320)
Q Consensus        67 ~~~~~~~----~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~----l~~~~~~~~~~~v~~Ss~~vy~~  134 (320)
                      +.++++.    ++.+|+|||+||.....    ......+..+++|+.+.+ .+    +..+++.+..+||++||.....+
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~  161 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATT-LLSSQFARGFDKKSGGRIINMTSGQFQGP  161 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHhhcCCeEEEEEcccccCCC
Confidence            8877754    35689999999975331    122234567889999875 44    44444444459999999875432


Q ss_pred             cCCCCcccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEe
Q 020880          135 VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEF  207 (320)
Q Consensus       135 ~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (320)
                                ..+...|+.+|...+.+.+.+.       .++..++|+.+-.+..    .     ..+...+....++  
T Consensus       162 ----------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~----~-----~~~~~~~~~~~~~--  220 (256)
T PRK12859        162 ----------MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWM----T-----EEIKQGLLPMFPF--  220 (256)
T ss_pred             ----------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCC----C-----HHHHHHHHhcCCC--
Confidence                      2246789999999999877643       4567789988754321    1     1111111111111  


Q ss_pred             ecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          208 FHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       208 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                           ..+...+|+|+++..++.....  ...+.++.+.++
T Consensus       221 -----~~~~~~~d~a~~~~~l~s~~~~--~~~G~~i~~dgg  254 (256)
T PRK12859        221 -----GRIGEPKDAARLIKFLASEEAE--WITGQIIHSEGG  254 (256)
T ss_pred             -----CCCcCHHHHHHHHHHHhCcccc--CccCcEEEeCCC
Confidence                 1245789999999988765321  123446666554

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.73  E-value=3.2e-16  Score=134.09  Aligned_cols=217  Identities=14%  Similarity=0.165  Sum_probs=140.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC---------CChhhhhhhC---CCcceEEEeeCCCcccHHH
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST---------PLPQLLLDAL---PHSFVFFDVDLKSGSGFDA   69 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~---------~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~   69 (320)
                      ++|+++||||++.||.+++++|+++|   ++|+...|+.         +......+.+   +..+.++.+|++|++++.+
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G---~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   81 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEG---ARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAAN   81 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHH
Confidence            46899999999999999999999999   7888877764         3333332222   3456678899999998877


Q ss_pred             HHHH----hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hcc------CceEEEeechhh
Q 020880           70 VALK----FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENK------ENLLIHLSTDQV  131 (320)
Q Consensus        70 ~~~~----~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~------~~~~v~~Ss~~v  131 (320)
                      +++.    ++++|++||+||.....    ....+++..+++|+.+++ .+.+++.    +..      ..+||++||.+.
T Consensus        82 ~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         82 LVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHF-ATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHH-HHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            6654    46899999999975421    223455778999999985 6655553    211      138999999775


Q ss_pred             hcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCc
Q 020880          132 YEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEK  204 (320)
Q Consensus       132 y~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  204 (320)
                      +.+.          .....|+.+|...+.+.+.+       +.++..+.|+ +.-+     ...    ........ ..+
T Consensus       161 ~~~~----------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~-----~~~----~~~~~~~~-~~~  219 (286)
T PRK07791        161 LQGS----------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTR-----MTE----TVFAEMMA-KPE  219 (286)
T ss_pred             CcCC----------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCC-----cch----hhHHHHHh-cCc
Confidence            4322          12568999999999877764       3355667776 3111     000    11111111 111


Q ss_pred             eEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          205 VEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       205 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                           .+...+...+|+|+++++++.....  ...+..+.+.+|..
T Consensus       220 -----~~~~~~~~pedva~~~~~L~s~~~~--~itG~~i~vdgG~~  258 (286)
T PRK07791        220 -----EGEFDAMAPENVSPLVVWLGSAESR--DVTGKVFEVEGGKI  258 (286)
T ss_pred             -----ccccCCCCHHHHHHHHHHHhCchhc--CCCCcEEEEcCCce
Confidence                 1111346799999999998865321  12345777776543

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.72  E-value=4.1e-16  Score=130.03  Aligned_cols=213  Identities=16%  Similarity=0.120  Sum_probs=141.1

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhh---hCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      |+||||+|+||.+++++|+++|   ++|+.+.|+.+. .....+   ..+.++.++.+|++|.+++.++++.    ++.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G---~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADG---FEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAY   77 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999   888888876432 222222   2245678899999999988776653    4578


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh-----hccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT-----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~-----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      |++||+||.....    ....+++..+++|+.+++ ++++++.     +.+..++|++||...+.+.          .+.
T Consensus        78 ~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----------~~~  146 (239)
T TIGR01831        78 YGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFY-NVIHPCTMPMIRARQGGRIITLASVSGVMGN----------RGQ  146 (239)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhhcCCeEEEEEcchhhccCC----------CCC
Confidence            9999999975432    233456778999999986 7776652     2344589999997654322          134


Q ss_pred             chHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          149 NVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      ..|+.+|...+.+.+.+       +.++..++|+.+..+-...     .. ....... ...++       ..+...+|+
T Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----~~-~~~~~~~-~~~~~-------~~~~~~~~v  212 (239)
T TIGR01831       147 VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE-----VE-HDLDEAL-KTVPM-------NRMGQPAEV  212 (239)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh-----hh-HHHHHHH-hcCCC-------CCCCCHHHH
Confidence            57999999888766653       3456789999987654211     11 1111111 11111       124678999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCC
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ++++.+++.....  ...+....+.++
T Consensus       213 a~~~~~l~~~~~~--~~~g~~~~~~gg  237 (239)
T TIGR01831       213 ASLAGFLMSDGAS--YVTRQVISVNGG  237 (239)
T ss_pred             HHHHHHHcCchhc--CccCCEEEecCC
Confidence            9999999875321  222335555443

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1e-16  Score=132.14  Aligned_cols=199  Identities=17%  Similarity=0.154  Sum_probs=138.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhC--CCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFG--QPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~--~~d~V   80 (320)
                      |++++||||+|+||++++++|+++|   ++|+++.|+.++.+.+..   ..++++.+|++|.+++..+++.+.  .+|+|
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G---~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~v   74 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADG---WRVIATARDAAALAALQA---LGAEALALDVADPASVAGLAWKLDGEALDAA   74 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCC---CEEEEEECCHHHHHHHHh---ccceEEEecCCCHHHHHHHHHHhcCCCCCEE
Confidence            5799999999999999999999999   889999998765544433   235678999999999888765543  48999


Q ss_pred             EECCCccCcc------ccccCchhhhhccccccHHHHHhhhhh---ccCceEEEeechh-hhcccCCCCcccCCCCCcch
Q 020880           81 VNCAALSVPR------VCENDPDSAMSINVPSSLVNWLSSFTE---NKENLLIHLSTDQ-VYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        81 ih~a~~~~~~------~~~~~~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~Ss~~-vy~~~~~~~~E~~~~~p~~~  150 (320)
                      ||++|.....      .+..+++..++.|+.+++ ++++++..   .+..++|++||.. .++...        ..+...
T Consensus        75 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------~~~~~~  145 (222)
T PRK06953         75 VYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPM-QLLPILLPLVEAAGGVLAVLSSRMGSIGDAT--------GTTGWL  145 (222)
T ss_pred             EECCCcccCCCCCcccCCHHHHHHHHhhhhhhHH-HHHHHHHHhhhccCCeEEEEcCccccccccc--------CCCccc
Confidence            9999976321      123455778999999986 88877754   2223789998865 444221        112346


Q ss_pred             HHHHHHHHHHHHHHHcC-----CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHH
Q 020880          151 YGKSKVAAEKFIYEKCS-----NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII  225 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~~~-----~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  225 (320)
                      |+.+|...+.+++.+..     ++..++|+.+.-+-..                 .           ...+..+|.++.+
T Consensus       146 Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~-----------------~-----------~~~~~~~~~~~~~  197 (222)
T PRK06953        146 YRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG-----------------A-----------QAALDPAQSVAGM  197 (222)
T ss_pred             cHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC-----------------C-----------CCCCCHHHHHHHH
Confidence            99999999999887644     3456777776443210                 0           0135678888888


Q ss_pred             HHHHhhhhccccccCceeEec
Q 020880          226 LALTNRWLSEDKQMQLLLNVG  246 (320)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~n~~  246 (320)
                      +.++.....  ...+..|...
T Consensus       198 ~~~~~~~~~--~~~~~~~~~~  216 (222)
T PRK06953        198 RRVIAQATR--RDNGRFFQYD  216 (222)
T ss_pred             HHHHHhcCc--ccCceEEeeC
Confidence            888776432  2334445443

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.4e-16  Score=131.56  Aligned_cols=165  Identities=16%  Similarity=0.180  Sum_probs=118.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      ||+++||||+|+||++++++|+++|   ++|++++|+++....... . .++.++.+|++|+++++++++.+  +++|+|
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~-~-~~~~~~~~D~~d~~~~~~~~~~~~~~~id~v   75 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERG---WQVTATVRGPQQDTALQA-L-PGVHIEKLDMNDPASLDQLLQRLQGQRFDLL   75 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCC---CEEEEEeCCCcchHHHHh-c-cccceEEcCCCCHHHHHHHHHHhhcCCCCEE
Confidence            5789999999999999999999999   899999998766544322 2 35677889999999988888765  369999


Q ss_pred             EECCCccCcc------ccccCchhhhhccccccHHHHHhhhhh---ccCceEEEeechhhhcccCCCCcccCCCCCcchH
Q 020880           81 VNCAALSVPR------VCENDPDSAMSINVPSSLVNWLSSFTE---NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVY  151 (320)
Q Consensus        81 ih~a~~~~~~------~~~~~~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y  151 (320)
                      ||+||...+.      ....+....+++|+.+++ .+++++..   .+...++++||......  .     .+..+...|
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~iv~~ss~~g~~~--~-----~~~~~~~~Y  147 (225)
T PRK08177         76 FVNAGISGPAHQSAADATAAEIGQLFLTNAIAPI-RLARRLLGQVRPGQGVLAFMSSQLGSVE--L-----PDGGEMPLY  147 (225)
T ss_pred             EEcCcccCCCCCCcccCCHHHHhhheeeeeeHHH-HHHHHHHHhhhhcCCEEEEEccCccccc--c-----CCCCCccch
Confidence            9999875331      122334567788999885 77776643   22247888887532211  1     111234579


Q ss_pred             HHHHHHHHHHHHHHc-------CCeeEEeecccccC
Q 020880          152 GKSKVAAEKFIYEKC-------SNFAILRSSIIYGP  180 (320)
Q Consensus       152 ~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~  180 (320)
                      +.+|...+.+++.+.       ..+..++||.+-.+
T Consensus       148 ~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        148 KASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence            999999999887653       23566888887443

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.72  E-value=6.6e-16  Score=131.41  Aligned_cols=227  Identities=15%  Similarity=0.117  Sum_probs=143.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHHh---CC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALKF---GQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~---~~   76 (320)
                      +|.++|||| |+||++++++|. +|   ++|++++|+.+......+.+   +..+.++.+|++|++++.++++.+   ++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G---~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~   76 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AG---KKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGP   76 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CC---CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCC
Confidence            578999997 789999999996 78   89999999866544433322   335778899999999988877643   57


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccC------C---CCcccC--
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVK------S---FYKEED--  143 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~------~---~~~E~~--  143 (320)
                      +|+|||+||....   ..+++..+++|+.+++ ++++++...  ...++|++||.+......      .   .++..+  
T Consensus        77 id~li~nAG~~~~---~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (275)
T PRK06940         77 VTGLVHTAGVSPS---QASPEAILKVDLYGTA-LVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELL  152 (275)
T ss_pred             CCEEEECCCcCCc---hhhHHHHHHHhhHHHH-HHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccc
Confidence            9999999997532   3467889999999996 777776542  113567777765432210      0   011110  


Q ss_pred             ------C---CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEe
Q 020880          144 ------E---IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEF  207 (320)
Q Consensus       144 ------~---~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (320)
                            +   ..+...|+.||...+.+.+.+       +.++..+.||.+-.+-........ ......... ...++  
T Consensus       153 ~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~-~~~~~~~~~-~~~p~--  228 (275)
T PRK06940        153 SLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGP-RGDGYRNMF-AKSPA--  228 (275)
T ss_pred             ccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCC-chHHHHHHh-hhCCc--
Confidence                  0   023568999999998877653       235677999988665321100000 001111111 11111  


Q ss_pred             ecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          208 FHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       208 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                           ..+...+|+|+++..++.....  -..+.++.+.++.
T Consensus       229 -----~r~~~peeia~~~~fL~s~~~~--~itG~~i~vdgg~  263 (275)
T PRK06940        229 -----GRPGTPDEIAALAEFLMGPRGS--FITGSDFLVDGGA  263 (275)
T ss_pred             -----ccCCCHHHHHHHHHHHcCcccC--cccCceEEEcCCe
Confidence                 1367899999999998864321  1224467776653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=5.6e-16  Score=131.60  Aligned_cols=221  Identities=17%  Similarity=0.113  Sum_probs=140.4

Q ss_pred             CCCcEEEEEcCC--ChhhHHHHHHHhhccCCCceEEEecCCCC---ChhhhhhhCCCcceEEEeeCCCcccHHHHHHH--
Q 020880            1 MSKKRVLVVGGT--GYLGQHLLQGLSEIEGKPYDVAATHHSTP---LPQLLLDALPHSFVFFDVDLKSGSGFDAVALK--   73 (320)
Q Consensus         1 m~~~~ilItGat--G~IG~~l~~~L~~~g~~v~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   73 (320)
                      |.+|+++||||+  +-||.++++.|+++|   ++|++..|+..   ....+....+.. .++.+|++|.+++.++++.  
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G---~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQG---AELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCC---CEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence            346899999997  799999999999999   88888888742   222232333333 5689999999998777754  


Q ss_pred             --hCCCCEEEECCCccCc--------cccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcc
Q 020880           74 --FGQPDVVVNCAALSVP--------RVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        74 --~~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                        ++++|++||+||....        +.+.++.+..+++|+.+.+ .+.+++...  .-.++|++||.....+.      
T Consensus        79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~p~m~~~g~Iv~isS~~~~~~~------  151 (274)
T PRK08415         79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLI-ELTRALLPLLNDGASVLTLSYLGGVKYV------  151 (274)
T ss_pred             HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHH-HHHHHHHHHhccCCcEEEEecCCCccCC------
Confidence              3689999999997531        1122345678899999985 555544321  11389999987543211      


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                          .....|+.+|...+.+.+.+.       .++..+.||.|-.+-.... . ..  ...........+.       ..
T Consensus       152 ----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~-~~--~~~~~~~~~~~pl-------~r  216 (274)
T PRK08415        152 ----PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGI-G-DF--RMILKWNEINAPL-------KK  216 (274)
T ss_pred             ----CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhcc-c-hh--hHHhhhhhhhCch-------hc
Confidence                124579999999998877653       3456788888754321000 0 00  0000000011111       12


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +...+|+|++++.++.....  ...+..+.+.+|.
T Consensus       217 ~~~pedva~~v~fL~s~~~~--~itG~~i~vdGG~  249 (274)
T PRK08415        217 NVSIEEVGNSGMYLLSDLSS--GVTGEIHYVDAGY  249 (274)
T ss_pred             cCCHHHHHHHHHHHhhhhhh--cccccEEEEcCcc
Confidence            57789999999999875321  1224477776653

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=4.5e-16  Score=134.44  Aligned_cols=151  Identities=19%  Similarity=0.238  Sum_probs=110.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-Chhhhhh---hCCCcceEEEeeCCCcccHHHHHHH---h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-LPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK---F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~---~   74 (320)
                      .+|+++||||+|+||.+++++|+++|   .+|+...++.. ..+...+   ..+..+.++.+|++|.+++.++++.   +
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~G---a~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~   87 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLG---ATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL   87 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence            46899999999999999999999999   78888877543 2322222   2234677899999999988777654   4


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh----c-------cCceEEEeechhhhcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE----N-------KENLLIHLSTDQVYEGVKSFY  139 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~-------~~~~~v~~Ss~~vy~~~~~~~  139 (320)
                      +++|+|||+||.....    ....+++..+++|+.+++ ++++++..    .       ...++|++||...+...    
T Consensus        88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~-~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  162 (306)
T PRK07792         88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHF-LLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP----  162 (306)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHH-HHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC----
Confidence            6899999999986432    223455678899999986 77776532    1       11389999997755322    


Q ss_pred             cccCCCCCcchHHHHHHHHHHHHHHHc
Q 020880          140 KEEDEIAPVNVYGKSKVAAEKFIYEKC  166 (320)
Q Consensus       140 ~E~~~~~p~~~Y~~sK~~~e~~~~~~~  166 (320)
                            .....|+.+|...+.+.+.+.
T Consensus       163 ------~~~~~Y~asKaal~~l~~~la  183 (306)
T PRK07792        163 ------VGQANYGAAKAGITALTLSAA  183 (306)
T ss_pred             ------CCCchHHHHHHHHHHHHHHHH
Confidence                  124579999999999877653

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.2e-16  Score=152.49  Aligned_cols=195  Identities=16%  Similarity=0.198  Sum_probs=142.1

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      |.+|+++||||||+||.+++++|+++|   ++|+++.|+++......+..   +..+.++.+|++|.+++.++++.    
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  445 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAG---ATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAE  445 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            346899999999999999999999999   89999999876654443322   34678899999999988877653    


Q ss_pred             hCCCCEEEECCCccCccc---c---ccCchhhhhccccccHHHHHhh----hhhccCceEEEeechhhhcccCCCCcccC
Q 020880           74 FGQPDVVVNCAALSVPRV---C---ENDPDSAMSINVPSSLVNWLSS----FTENKENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~---~---~~~~~~~~~~n~~~~~~~~l~~----~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                      ++++|+|||+||......   .   ..+++..+++|+.+++ +++++    +++.+..++|++||.+.+....       
T Consensus       446 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  517 (657)
T PRK07201        446 HGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAV-RLILGLLPHMRERRFGHVVNVSSIGVQTNAP-------  517 (657)
T ss_pred             cCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHH-HHHHHHHHhhhhcCCCEEEEECChhhcCCCC-------
Confidence            457999999999753211   1   1245677899999875 55444    4556667999999998876432       


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                         ....|+.+|...+.+.+.+       +.++.+++|+.|..+-....   .           ...        ....+
T Consensus       518 ---~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~---~-----------~~~--------~~~~~  572 (657)
T PRK07201        518 ---RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT---K-----------RYN--------NVPTI  572 (657)
T ss_pred             ---CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc---c-----------ccc--------CCCCC
Confidence               2568999999999987754       45678899999976532100   0           000        01246


Q ss_pred             eHHHHHHHHHHHHhh
Q 020880          217 YVRDVVKIILALTNR  231 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~  231 (320)
                      ..+++|+.++..+..
T Consensus       573 ~~~~~a~~i~~~~~~  587 (657)
T PRK07201        573 SPEEAADMVVRAIVE  587 (657)
T ss_pred             CHHHHHHHHHHHHHh
Confidence            799999999988765

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.71  E-value=9e-17  Score=132.97  Aligned_cols=152  Identities=19%  Similarity=0.213  Sum_probs=113.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhh----hhhCCCc-ceEEEeeCCCcccHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL----LDALPHS-FVFFDVDLKSGSGFDAVA----L   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~----~~~~~~~-~~~~~~Dl~d~~~~~~~~----~   72 (320)
                      .+|.|+|||||.-||.+++.+|.++|   ..++.+.|.....+..    .+..+.. +..+++|++|.+++..++    .
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G---~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~   87 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRG---AKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR   87 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCC---CceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999   6666666665554443    3333344 888999999999877665    5


Q ss_pred             HhCCCCEEEECCCccCcccc----ccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           73 KFGQPDVVVNCAALSVPRVC----ENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      .++++|++||+||.......    ..+....+++|+.|+.   ..++..+++.+-.+||.+||++.+-.-          
T Consensus        88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~----------  157 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL----------  157 (282)
T ss_pred             hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC----------
Confidence            67899999999999763221    2233467899999984   145555566664599999999876432          


Q ss_pred             CCcchHHHHHHHHHHHHHHHc
Q 020880          146 APVNVYGKSKVAAEKFIYEKC  166 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~  166 (320)
                      .....|..||.+.+.+.+.+.
T Consensus       158 P~~~~Y~ASK~Al~~f~etLR  178 (282)
T KOG1205|consen  158 PFRSIYSASKHALEGFFETLR  178 (282)
T ss_pred             CcccccchHHHHHHHHHHHHH
Confidence            123489999999999877653

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=1e-15  Score=129.87  Aligned_cols=220  Identities=18%  Similarity=0.131  Sum_probs=141.2

Q ss_pred             CCCcEEEEEcCCC--hhhHHHHHHHhhccCCCceEEEecCCCCChh---hhhhhCCCcceEEEeeCCCcccHHHHHHH--
Q 020880            1 MSKKRVLVVGGTG--YLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ---LLLDALPHSFVFFDVDLKSGSGFDAVALK--   73 (320)
Q Consensus         1 m~~~~ilItGatG--~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   73 (320)
                      |++|.+|||||++  -||.+++++|+++|   ++|+...|+....+   .+.+..+ ...++.+|++|++++.++++.  
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~G---a~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~   80 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQG---AELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALE   80 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCC---CEEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHH
Confidence            3468999999997  99999999999999   88988888743222   2222222 234688999999998777754  


Q ss_pred             --hCCCCEEEECCCccCc--------cccccCchhhhhccccccHHHHHhhhhh---ccCceEEEeechhhhcccCCCCc
Q 020880           74 --FGQPDVVVNCAALSVP--------RVCENDPDSAMSINVPSSLVNWLSSFTE---NKENLLIHLSTDQVYEGVKSFYK  140 (320)
Q Consensus        74 --~~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~Ss~~vy~~~~~~~~  140 (320)
                        ++.+|++||+||....        ..+.++++..+++|+.+++ .+++++..   .+ .++|++||.......     
T Consensus        81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~-~l~~~~~~~m~~~-G~Iv~isS~~~~~~~-----  153 (271)
T PRK06505         81 KKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFT-EIAKRAAKLMPDG-GSMLTLTYGGSTRVM-----  153 (271)
T ss_pred             HHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHH-HHHHHHHHhhccC-ceEEEEcCCCccccC-----
Confidence              4689999999997532        1223345677889999885 66554432   22 489999987643211     


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCccc
Q 020880          141 EEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       141 E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                           .....|+.+|...+.+.+.+.       .++..+.||.+-.+-... ...   ...+........++       .
T Consensus       154 -----~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~-~~~---~~~~~~~~~~~~p~-------~  217 (271)
T PRK06505        154 -----PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAG-IGD---ARAIFSYQQRNSPL-------R  217 (271)
T ss_pred             -----CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccccccc-Ccc---hHHHHHHHhhcCCc-------c
Confidence                 124589999999999877643       345678998886542110 000   00111111111121       1


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .+...+|+|++++.++.....  ...+.++.+.+|.
T Consensus       218 r~~~peeva~~~~fL~s~~~~--~itG~~i~vdgG~  251 (271)
T PRK06505        218 RTVTIDEVGGSALYLLSDLSS--GVTGEIHFVDSGY  251 (271)
T ss_pred             ccCCHHHHHHHHHHHhCcccc--ccCceEEeecCCc
Confidence            246789999999998865321  1234477777664

>PRK05855 short chain dehydrogenase; Validated

Probab=99.70  E-value=1.3e-16  Score=150.09  Aligned_cols=164  Identities=18%  Similarity=0.223  Sum_probs=124.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHHh----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      ..+++|||||+|+||++++++|.++|   ++|+++.|+.++.+.....   .+..+.++.+|++|++++.++++.+    
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREG---AEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            45799999999999999999999999   8899999987655443332   2346788999999999988777643    


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhcc-CceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENK-ENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +.+|+|||+||.....    .+.++.+..+++|+.+++ ++++++    .+.+ ..+||++||.+.|.+..         
T Consensus       391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~-~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------  460 (582)
T PRK05855        391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVI-HGCRLFGRQMVERGTGGHIVNVASAAAYAPSR---------  460 (582)
T ss_pred             CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCcEEEEECChhhccCCC---------
Confidence            5689999999986432    122345677889999986 666654    3333 24899999999886432         


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeeccccc
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYG  179 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G  179 (320)
                       +...|+.+|...+.+.+.+       +.++.+++||.|-.
T Consensus       461 -~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t  500 (582)
T PRK05855        461 -SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDT  500 (582)
T ss_pred             -CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcc
Confidence             3678999999998877654       34678899998844

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.70  E-value=6.3e-16  Score=122.62  Aligned_cols=162  Identities=15%  Similarity=0.119  Sum_probs=118.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhh------hhhCCCcceEEEeeCCCcccHHHHHHHh---
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL------LDALPHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      ++++||||+|+||.+++++|+++|.  ..|+.+.|+++.....      ....+..+.++.+|+++++++.++++..   
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGA--RHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhC--CeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4799999999999999999999983  3677778875543221      1122345677899999998887776543   


Q ss_pred             -CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           75 -GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        75 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                       +.+|.|||+|+.....    ....+++..++.|+.++. ++++++++.+.+++|++||....-+.          ....
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~ii~~ss~~~~~~~----------~~~~  147 (180)
T smart00822       79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAW-NLHELTRDLPLDFFVLFSSVAGVLGN----------PGQA  147 (180)
T ss_pred             cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHH-HHHHHhccCCcceEEEEccHHHhcCC----------CCch
Confidence             4689999999975332    122345677899999986 99999988787899999987653221          1355


Q ss_pred             hHHHHHHHHHHHHHHH---cCCeeEEeecccc
Q 020880          150 VYGKSKVAAEKFIYEK---CSNFAILRSSIIY  178 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~---~~~~~ilR~~~v~  178 (320)
                      .|+.+|...+.+++..   +.+.+.+.|+.+-
T Consensus       148 ~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      148 NYAAANAFLDALAAHRRARGLPATSINWGAWA  179 (180)
T ss_pred             hhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence            7999999999988653   4566777777653

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.69  E-value=4.4e-16  Score=134.90  Aligned_cols=218  Identities=15%  Similarity=0.122  Sum_probs=138.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHHh----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      ++++++||||++.||.+++++|+++|.  ++|++.+|+.++.......+   +..+.++.+|++|.++++++++.+    
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGE--WHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC--CEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            367999999999999999999999983  47888888876554443332   235677889999999988777643    


Q ss_pred             CCCCEEEECCCccCcc-----ccccCchhhhhccccccHHHHH----hhhhhcc--CceEEEeechhhhcccC-----CC
Q 020880           75 GQPDVVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWL----SSFTENK--ENLLIHLSTDQVYEGVK-----SF  138 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l----~~~~~~~--~~~~v~~Ss~~vy~~~~-----~~  138 (320)
                      +++|++||+||...+.     .+....+..+++|+.+.+ .+.    ..+++.+  ..+||++||...+....     .+
T Consensus        80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~-~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  158 (314)
T TIGR01289        80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHF-LLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPK  158 (314)
T ss_pred             CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHH-HHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCc
Confidence            5799999999975321     122345677899999975 554    4343332  35999999987754210     00


Q ss_pred             ------------------CcccCCCCCcchHHHHHHHHHHHHHHH--------cCCeeEEeecccccCCCCCCCCCCChH
Q 020880          139 ------------------YKEEDEIAPVNVYGKSKVAAEKFIYEK--------CSNFAILRSSIIYGPQTISPVPKSLPI  192 (320)
Q Consensus       139 ------------------~~E~~~~~p~~~Y~~sK~~~e~~~~~~--------~~~~~ilR~~~v~G~~~~~~~~~~~~~  192 (320)
                                        ..+..+..+...|+.||.....+.+.+        +..++.++||.|....-.... .. ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~-~~-~~  236 (314)
T TIGR01289       159 ANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREH-VP-LF  236 (314)
T ss_pred             ccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccc-cH-HH
Confidence                              011223346678999999977755543        234577999988543211000 00 00


Q ss_pred             HHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhh
Q 020880          193 QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  232 (320)
                      ..+.....   ...     ...+...++.|+.++.++..+
T Consensus       237 ~~~~~~~~---~~~-----~~~~~~~~~~a~~l~~~~~~~  268 (314)
T TIGR01289       237 RTLFPPFQ---KYI-----TKGYVSEEEAGERLAQVVSDP  268 (314)
T ss_pred             HHHHHHHH---HHH-----hccccchhhhhhhhHHhhcCc
Confidence            01100000   000     012467889999988887764

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.69  E-value=6.8e-16  Score=136.20  Aligned_cols=185  Identities=19%  Similarity=0.215  Sum_probs=120.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ++|+|+||||+|+||++++++|.++|   ++|+++.|++++...........+..+.+|++|++++.+.+.   ++|++|
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G---~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~---~IDiLI  250 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQG---AKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLE---KVDILI  250 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhC---CCCEEE
Confidence            46899999999999999999999999   889999887654433222212235678899999988777664   899999


Q ss_pred             ECCCccCc-cccccCchhhhhccccccHHHHHhhhhh----ccC----ceEEEeechhhhcccCCCCcccCCCCCcchHH
Q 020880           82 NCAALSVP-RVCENDPDSAMSINVPSSLVNWLSSFTE----NKE----NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYG  152 (320)
Q Consensus        82 h~a~~~~~-~~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~----~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~  152 (320)
                      |+||.... +.+.++++..+++|+.+++ ++++++..    .+.    ..+|.+|++. ..          + .....|+
T Consensus       251 nnAGi~~~~~~s~e~~~~~~~vNv~g~i-~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~~----------~-~~~~~Y~  317 (406)
T PRK07424        251 INHGINVHGERTPEAINKSYEVNTFSAW-RLMELFFTTVKTNRDKATKEVWVNTSEAE-VN----------P-AFSPLYE  317 (406)
T ss_pred             ECCCcCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCCCCeEEEEEcccc-cc----------C-CCchHHH
Confidence            99987532 2233355778999999986 77777642    221    1345555422 11          1 1134699


Q ss_pred             HHHHHHHHHHHH--HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHh
Q 020880          153 KSKVAAEKFIYE--KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN  230 (320)
Q Consensus       153 ~sK~~~e~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  230 (320)
                      .||...+.+..-  ...+ +.+| ..+.||-....                 .+        ...+..+|+|+.++.+++
T Consensus       318 ASKaAl~~l~~l~~~~~~-~~I~-~i~~gp~~t~~-----------------~~--------~~~~spe~vA~~il~~i~  370 (406)
T PRK07424        318 LSKRALGDLVTLRRLDAP-CVVR-KLILGPFKSNL-----------------NP--------IGVMSADWVAKQILKLAK  370 (406)
T ss_pred             HHHHHHHHHHHHHHhCCC-CceE-EEEeCCCcCCC-----------------Cc--------CCCCCHHHHHHHHHHHHH
Confidence            999999886432  2222 1222 22334432100                 00        013678999999999998


Q ss_pred             hh
Q 020880          231 RW  232 (320)
Q Consensus       231 ~~  232 (320)
                      ++
T Consensus       371 ~~  372 (406)
T PRK07424        371 RD  372 (406)
T ss_pred             CC
Confidence            73

>PRK06484 short chain dehydrogenase; Validated

Probab=99.69  E-value=1.3e-15  Score=141.36  Aligned_cols=206  Identities=13%  Similarity=0.113  Sum_probs=142.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      .+|+++||||++.||.+++++|.++|   ++|+++.|+.+....+....+..+.++.+|++|++++.++++.    ++++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAG---DQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            36899999999999999999999999   8999999987776666665555677799999999998777754    3679


Q ss_pred             CEEEECCCccCc------cccccCchhhhhccccccHHHHHhhhhh----ccC-ceEEEeechhhhcccCCCCcccCCCC
Q 020880           78 DVVVNCAALSVP------RVCENDPDSAMSINVPSSLVNWLSSFTE----NKE-NLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        78 d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      |++||+||...+      +.+..+++..+++|+.+++ .+++++..    .+. .++|++||........          
T Consensus        81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~----------  149 (520)
T PRK06484         81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAY-LVAREALRLMIEQGHGAAIVNVASGAGLVALP----------  149 (520)
T ss_pred             CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCCeEEEECCcccCCCCC----------
Confidence            999999997321      1223446778999999986 66666543    233 3899999987654321          


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      ....|+.+|...+.+.+.+       +.++..++|+.+-.+-.........   ..........+       ...+...+
T Consensus       150 ~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~-------~~~~~~~~  219 (520)
T PRK06484        150 KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGK---LDPSAVRSRIP-------LGRLGRPE  219 (520)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccch---hhhHHHHhcCC-------CCCCcCHH
Confidence            2568999999999977654       3456778888775443210000000   00000101111       11246789


Q ss_pred             HHHHHHHHHHhh
Q 020880          220 DVVKIILALTNR  231 (320)
Q Consensus       220 D~a~~~~~~~~~  231 (320)
                      |+++++.+++..
T Consensus       220 ~va~~v~~l~~~  231 (520)
T PRK06484        220 EIAEAVFFLASD  231 (520)
T ss_pred             HHHHHHHHHhCc
Confidence            999999988865

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=2e-15  Score=128.16  Aligned_cols=221  Identities=18%  Similarity=0.127  Sum_probs=141.8

Q ss_pred             CCCcEEEEEcCC--ChhhHHHHHHHhhccCCCceEEEecCCCC---ChhhhhhhCCCcceEEEeeCCCcccHHHHHHH--
Q 020880            1 MSKKRVLVVGGT--GYLGQHLLQGLSEIEGKPYDVAATHHSTP---LPQLLLDALPHSFVFFDVDLKSGSGFDAVALK--   73 (320)
Q Consensus         1 m~~~~ilItGat--G~IG~~l~~~L~~~g~~v~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   73 (320)
                      |.+|+++||||+  +-||.+++++|+++|   ++|++..|+..   ..+.+.+.++ ....+.+|++|+++++++++.  
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G---~~V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~   83 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAG---AELAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLE   83 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHH
Confidence            456899999997  899999999999999   88888777632   2222323332 345689999999998877754  


Q ss_pred             --hCCCCEEEECCCccCc--------cccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcc
Q 020880           74 --FGQPDVVVNCAALSVP--------RVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        74 --~~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                        ++.+|++||+||....        +.+.++++..+++|+.+++ .+++++...  +-.++|++||......       
T Consensus        84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~-~l~~~~~~~~~~~g~Iv~iss~~~~~~-------  155 (272)
T PRK08159         84 KKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFT-AVAQRAEKLMTDGGSILTLTYYGAEKV-------  155 (272)
T ss_pred             HhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHH-HHHHHHHHhcCCCceEEEEeccccccC-------
Confidence              4579999999997532        1122345678899999886 666655431  1248999998654321       


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                         ......|+.+|...+.+.+.+.       .++..+.||.+-.+-... ... .  ..+........++       ..
T Consensus       156 ---~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~-~--~~~~~~~~~~~p~-------~r  221 (272)
T PRK08159        156 ---MPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASG-IGD-F--RYILKWNEYNAPL-------RR  221 (272)
T ss_pred             ---CCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhc-CCc-c--hHHHHHHHhCCcc-------cc
Confidence               1124579999999999887653       345678888875431100 000 0  0011111111111       12


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +...+|+|+++++++.....  ...+.++.+.+|.
T Consensus       222 ~~~peevA~~~~~L~s~~~~--~itG~~i~vdgG~  254 (272)
T PRK08159        222 TVTIEEVGDSALYLLSDLSR--GVTGEVHHVDSGY  254 (272)
T ss_pred             cCCHHHHHHHHHHHhCcccc--CccceEEEECCCc
Confidence            57789999999999875321  2234578887764

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.4e-15  Score=123.11  Aligned_cols=178  Identities=17%  Similarity=0.132  Sum_probs=125.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+++||||+|.||.+++++|.++    ++|++..|+..              .+.+|++|.++++++++.++++|+|||+
T Consensus         1 ~~vlItGas~giG~~la~~l~~~----~~vi~~~r~~~--------------~~~~D~~~~~~~~~~~~~~~~id~lv~~   62 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR----HEVITAGRSSG--------------DVQVDITDPASIRALFEKVGKVDAVVSA   62 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc----CcEEEEecCCC--------------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence            47999999999999999999887    46788888642              2789999999999999887789999999


Q ss_pred             CCccCccc----cccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHH
Q 020880           84 AALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVA  157 (320)
Q Consensus        84 a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~  157 (320)
                      ||......    ...++...+++|+.+++ ++++++...  +..+++++||.....+          ......|+.+|..
T Consensus        63 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~g~iv~iss~~~~~~----------~~~~~~Y~~sK~a  131 (199)
T PRK07578         63 AGKVHFAPLAEMTDEDFNVGLQSKLMGQV-NLVLIGQHYLNDGGSFTLTSGILSDEP----------IPGGASAATVNGA  131 (199)
T ss_pred             CCCCCCCchhhCCHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCeEEEEcccccCCC----------CCCchHHHHHHHH
Confidence            99754321    22345566789999885 777776542  2247999998764322          1235689999999


Q ss_pred             HHHHHHHHc------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhh
Q 020880          158 AEKFIYEKC------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR  231 (320)
Q Consensus       158 ~e~~~~~~~------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  231 (320)
                      .+.+.+.+.      .++..++|+.+-.+..           ..      +..+  .   ...++..+|+|+++..++..
T Consensus       132 ~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~-----------~~------~~~~--~---~~~~~~~~~~a~~~~~~~~~  189 (199)
T PRK07578        132 LEGFVKAAALELPRGIRINVVSPTVLTESLE-----------KY------GPFF--P---GFEPVPAARVALAYVRSVEG  189 (199)
T ss_pred             HHHHHHHHHHHccCCeEEEEEcCCcccCchh-----------hh------hhcC--C---CCCCCCHHHHHHHHHHHhcc
Confidence            999877643      3345577776622110           00      0001  0   11358899999999999876


Q ss_pred             h
Q 020880          232 W  232 (320)
Q Consensus       232 ~  232 (320)
                      .
T Consensus       190 ~  190 (199)
T PRK07578        190 A  190 (199)
T ss_pred             c
Confidence            4

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=3.9e-15  Score=125.51  Aligned_cols=219  Identities=16%  Similarity=0.151  Sum_probs=140.2

Q ss_pred             CCcEEEEEcCC--ChhhHHHHHHHhhccCCCceEEEecCCCCCh---hhhhhhCCCcceEEEeeCCCcccHHHHHHH---
Q 020880            2 SKKRVLVVGGT--GYLGQHLLQGLSEIEGKPYDVAATHHSTPLP---QLLLDALPHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         2 ~~~~ilItGat--G~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      .+|+++||||+  +-||.+++++|+++|   ++|++..|+....   ..+.+..+ ...++.+|++|.+++.++++.   
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G---~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   84 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALG---AELAVTYLNDKARPYVEPLAEELD-APIFLPLDVREPGQLEAVFARIAE   84 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcC---CEEEEEeCChhhHHHHHHHHHhhc-cceEEecCcCCHHHHHHHHHHHHH
Confidence            46899999998  599999999999999   8888888875432   22222222 345688999999998877654   


Q ss_pred             -hCCCCEEEECCCccCc--------cccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCccc
Q 020880           74 -FGQPDVVVNCAALSVP--------RVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                       ++++|++|||||....        +.+.++++..+++|+.+.+ .+.+.+...  .-.++|++||......        
T Consensus        85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~-~~~~~~~p~m~~~g~Ii~iss~~~~~~--------  155 (258)
T PRK07533         85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFI-RMARLAEPLMTNGGSLLTMSYYGAEKV--------  155 (258)
T ss_pred             HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHH-HHHHHHHHHhccCCEEEEEeccccccC--------
Confidence             3679999999997532        1122345678899999986 666555321  1138999998654211        


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                        ......|+.+|...+.+.+.+.       .++..+.|+.+-.+-....  ... ...... .....+.       ..+
T Consensus       156 --~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~--~~~-~~~~~~-~~~~~p~-------~r~  222 (258)
T PRK07533        156 --VENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGI--DDF-DALLED-AAERAPL-------RRL  222 (258)
T ss_pred             --CccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhcc--CCc-HHHHHH-HHhcCCc-------CCC
Confidence              1124579999999998777643       3566788887754321100  000 111111 1111111       135


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ...+|+|+++++++.....  ...+..+.+.++
T Consensus       223 ~~p~dva~~~~~L~s~~~~--~itG~~i~vdgg  253 (258)
T PRK07533        223 VDIDDVGAVAAFLASDAAR--RLTGNTLYIDGG  253 (258)
T ss_pred             CCHHHHHHHHHHHhChhhc--cccCcEEeeCCc
Confidence            7889999999999865321  123446666554

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.68  E-value=4.9e-16  Score=134.64  Aligned_cols=193  Identities=13%  Similarity=0.110  Sum_probs=130.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----C-CcceEEEeeCCC--cccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----P-HSFVFFDVDLKS--GSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~d--~~~~~~~~~~~~   75 (320)
                      ++.++||||||.||.+++++|.++|   ++|++..|++++.+...+.+    + ..+..+.+|+++  .+.+.++.+.++
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G---~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~  129 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKG---LNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIE  129 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhc
Confidence            5789999999999999999999999   88999999977655443322    1 246678899985  234444555444


Q ss_pred             C--CCEEEECCCccCcc------ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccC
Q 020880           76 Q--PDVVVNCAALSVPR------VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        76 ~--~d~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                      +  +|++||+||...+.      .+..+.+..+++|+.+++ .+.+++    .+.+..++|++||.+.+....       
T Consensus       130 ~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-------  201 (320)
T PLN02780        130 GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTT-KVTQAVLPGMLKRKKGAIINIGSGAAIVIPS-------  201 (320)
T ss_pred             CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHH-HHHHHHHHHHHhcCCcEEEEEechhhccCCC-------
Confidence            4  56999999975321      112234567899999985 666554    345556999999987753110       


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                       ......|+.||...+.+.+.+       +.++.+++||.|-.+-..               . ....+.        ..
T Consensus       202 -~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~---------------~-~~~~~~--------~~  256 (320)
T PLN02780        202 -DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS---------------I-RRSSFL--------VP  256 (320)
T ss_pred             -CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc---------------c-cCCCCC--------CC
Confidence             012568999999999977764       345677889888443210               0 000110        24


Q ss_pred             eHHHHHHHHHHHHhh
Q 020880          217 YVRDVVKIILALTNR  231 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~  231 (320)
                      ..+++|+.++..+..
T Consensus       257 ~p~~~A~~~~~~~~~  271 (320)
T PLN02780        257 SSDGYARAALRWVGY  271 (320)
T ss_pred             CHHHHHHHHHHHhCC
Confidence            678999999988854

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.67  E-value=6.8e-16  Score=120.41  Aligned_cols=278  Identities=12%  Similarity=0.070  Sum_probs=180.3

Q ss_pred             cEEEEEcCCChhhHHHHH-----HHhhcc--CCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            4 KRVLVVGGTGYLGQHLLQ-----GLSEIE--GKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~-----~L~~~g--~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      .+.++-+++|+|+..|..     ++-..+  .+ ++|+.+.|++.+..         +.+-..|..-.      .   ..
T Consensus        13 r~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~-h~vtv~sR~pg~~r---------itw~el~~~Gi------p---~s   73 (315)
T KOG3019|consen   13 RDAVSNWSNGIIRENLGSETSCCHDTNVHSADN-HAVTVLSRSPGKAR---------ITWPELDFPGI------P---IS   73 (315)
T ss_pred             ccCCCCccccchhccccCcccccccCCCCcccc-cceEEEecCCCCcc---------cccchhcCCCC------c---ee
Confidence            467788999999988876     332222  22 78999999976643         33222222111      0   14


Q ss_pred             CCEEEECCCccCc----cccccCchhhhhccccccHHHHHhhhhhcc--CceEEEeechhhhcccCC-CCcccCCCCCcc
Q 020880           77 PDVVVNCAALSVP----RVCENDPDSAMSINVPSSLVNWLSSFTENK--ENLLIHLSTDQVYEGVKS-FYKEEDEIAPVN  149 (320)
Q Consensus        77 ~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~--~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~  149 (320)
                      |+.++++++....    .++..-..+.+...+..+ ..++++..++.  .+.+|.+|..++|-+.+. .++|+++....+
T Consensus        74 c~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t-~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd  152 (315)
T KOG3019|consen   74 CVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVT-SKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFD  152 (315)
T ss_pred             hHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHH-HHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChH
Confidence            5666665554321    121111122332333333 25666666554  357999999999986544 799999998888


Q ss_pred             hHHHHHHHHHHHHHHHcC--CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHH
Q 020880          150 VYGKSKVAAEKFIYEKCS--NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA  227 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~~--~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  227 (320)
                      ...+...+.|...+..+.  +.+++|.+.|.|.+.... ...    ++.-.+..|.++. .|+++..|||++|++..+..
T Consensus       153 ~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~-~~M----~lpF~~g~GGPlG-sG~Q~fpWIHv~DL~~li~~  226 (315)
T KOG3019|consen  153 ILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGAL-AMM----ILPFQMGAGGPLG-SGQQWFPWIHVDDLVNLIYE  226 (315)
T ss_pred             HHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcch-hhh----hhhhhhccCCcCC-CCCeeeeeeehHHHHHHHHH
Confidence            888888888888877655  568999999999986321 111    1111122355543 25578999999999999999


Q ss_pred             HHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCC-C-----CCccccChHHHHhhcC
Q 020880          228 LTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQ-S-----PADISMDITKLVQTLN  301 (320)
Q Consensus       228 ~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~d~~k~~~~lg  301 (320)
                      +++++.-     .+++|-..++..+..|+++.+.++++++..+  ++|....+.-.. .     .....+-..|+ .++|
T Consensus       227 ale~~~v-----~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~--pvP~fvvqA~fG~erA~~vLeGqKV~Pqra-l~~G  298 (315)
T KOG3019|consen  227 ALENPSV-----KGVINGVAPNPVRNGEFCQQLGSALSRPSWL--PVPDFVVQALFGPERATVVLEGQKVLPQRA-LELG  298 (315)
T ss_pred             HHhcCCC-----CceecccCCCccchHHHHHHHHHHhCCCccc--CCcHHHHHHHhCccceeEEeeCCcccchhH-hhcC
Confidence            9998533     4499999999999999999999999988654  344332222111 0     11223344555 4479


Q ss_pred             CCc--cCHHHHHHHHH
Q 020880          302 IDP--VTYKDGVKLTL  315 (320)
Q Consensus       302 ~~~--~~~~~~l~~~i  315 (320)
                      |++  ..+.+++++++
T Consensus       299 f~f~yp~vk~Al~~i~  314 (315)
T KOG3019|consen  299 FEFKYPYVKDALRAIM  314 (315)
T ss_pred             ceeechHHHHHHHHHh
Confidence            998  58999999875

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.67  E-value=3.2e-15  Score=124.37  Aligned_cols=194  Identities=15%  Similarity=0.180  Sum_probs=129.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|+||||+|+||++++++|+++|.. ..|....|+....  .   ....+.++++|++|.++++++.+.++++|+|||+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~-~~v~~~~~~~~~~--~---~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~   74 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPD-ATVHATYRHHKPD--F---QHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINC   74 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCC-CEEEEEccCCccc--c---ccCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            58999999999999999999998643 5676666654322  1   1245778999999999988888877889999999


Q ss_pred             CCccCccc-------cc---cCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           84 AALSVPRV-------CE---NDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        84 a~~~~~~~-------~~---~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      ||......       ..   ......+.+|+.+.+ .+++.+    ++.+..+++++||...  ..    .+ .+..+..
T Consensus        75 aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~-~~~~~~~~~~~~~~~~~i~~iss~~~--~~----~~-~~~~~~~  146 (235)
T PRK09009         75 VGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSL-LLAKHFTPKLKQSESAKFAVISAKVG--SI----SD-NRLGGWY  146 (235)
T ss_pred             CccccccccCcccccccCCHHHHHHHHHHHhHHHH-HHHHHHHhhccccCCceEEEEeeccc--cc----cc-CCCCCcc
Confidence            99864210       01   123456788888874 444444    3444458999987431  11    00 1122456


Q ss_pred             hHHHHHHHHHHHHHHHcC---------CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          150 VYGKSKVAAEKFIYEKCS---------NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~~---------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      .|+.+|...+.+.+.+..         ++..+.|+.+-.+-..     .     +.    ...+       ...++..+|
T Consensus       147 ~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~-----~-----~~----~~~~-------~~~~~~~~~  205 (235)
T PRK09009        147 SYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSK-----P-----FQ----QNVP-------KGKLFTPEY  205 (235)
T ss_pred             hhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCc-----c-----hh----hccc-------cCCCCCHHH
Confidence            899999999998876532         2345777776544211     0     00    0111       123578999


Q ss_pred             HHHHHHHHHhhh
Q 020880          221 VVKIILALTNRW  232 (320)
Q Consensus       221 ~a~~~~~~~~~~  232 (320)
                      +|++++.++...
T Consensus       206 ~a~~~~~l~~~~  217 (235)
T PRK09009        206 VAQCLLGIIANA  217 (235)
T ss_pred             HHHHHHHHHHcC
Confidence            999999999874

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.67  E-value=7.3e-16  Score=127.01  Aligned_cols=199  Identities=18%  Similarity=0.175  Sum_probs=136.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhC-CCCEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFG-QPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~~d~Vih   82 (320)
                      |+++||||+|.||+++++.|.++|   ++|+...|+.++.....+..  ++.++.+|++|++++.++++.+. .+|++||
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g---~~v~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~   75 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDG---HKVTLVGARRDDLEVAAKEL--DVDAIVCDNTDPASLEEARGLFPHHLDTIVN   75 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHhc--cCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence            379999999999999999999999   89999999866555444432  35678999999999988887552 5899999


Q ss_pred             CCCccC----c---cc--cccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCCcchH
Q 020880           83 CAALSV----P---RV--CENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVY  151 (320)
Q Consensus        83 ~a~~~~----~---~~--~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y  151 (320)
                      +|+...    +   ..  ..++.+..+++|+.+++ .+++++...  ...++|++||...              .+...|
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~-~~~~~~~~~~~~~g~Iv~isS~~~--------------~~~~~Y  140 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAV-LTVQSVGDHLRSGGSIISVVPENP--------------PAGSAE  140 (223)
T ss_pred             CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHH-HHHHHHHHHhhcCCeEEEEecCCC--------------CCcccc
Confidence            998521    1   00  12345778899999986 777666431  1248999998651              124579


Q ss_pred             HHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHH
Q 020880          152 GKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI  224 (320)
Q Consensus       152 ~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  224 (320)
                      +.+|...+.+.+.+.       .++..+.||.+-.+.             ... .. ..+          .-..+|++++
T Consensus       141 ~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~-------------~~~-~~-~~p----------~~~~~~ia~~  195 (223)
T PRK05884        141 AAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG-------------YDG-LS-RTP----------PPVAAEIARL  195 (223)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh-------------hhh-cc-CCC----------CCCHHHHHHH
Confidence            999999999887653       245678888774321             000 00 001          1267999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCC
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +..++.....  ...+.++.+.+|.
T Consensus       196 ~~~l~s~~~~--~v~G~~i~vdgg~  218 (223)
T PRK05884        196 ALFLTTPAAR--HITGQTLHVSHGA  218 (223)
T ss_pred             HHHHcCchhh--ccCCcEEEeCCCe
Confidence            9998765322  1234467766553

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=4.8e-15  Score=124.82  Aligned_cols=219  Identities=13%  Similarity=0.049  Sum_probs=137.6

Q ss_pred             CcEEEEEcCC--ChhhHHHHHHHhhccCCCceEEEecCCC---CChhhhhhhC-CCcceEEEeeCCCcccHHHHHHH---
Q 020880            3 KKRVLVVGGT--GYLGQHLLQGLSEIEGKPYDVAATHHST---PLPQLLLDAL-PHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         3 ~~~ilItGat--G~IG~~l~~~L~~~g~~v~~v~~~~r~~---~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      +|+++||||+  +-||.+++++|+++|   ++|+...|+.   +..+.+.+.. +.++.++.+|++|++++.++++.   
T Consensus         7 ~k~~lItGa~~s~GIG~aia~~la~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (257)
T PRK08594          7 GKTYVVMGVANKRSIAWGIARSLHNAG---AKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE   83 (257)
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCC---CEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            5799999997  899999999999999   8888887753   2233333333 24567789999999998777753   


Q ss_pred             -hCCCCEEEECCCccCc-----c---ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCccc
Q 020880           74 -FGQPDVVVNCAALSVP-----R---VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~-----~---~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                       ++++|++||+||....     +   .+.......+++|+.+.+ .+.+++...  ...+||++||....-+        
T Consensus        84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~g~Iv~isS~~~~~~--------  154 (257)
T PRK08594         84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLT-AVAREAKKLMTEGGSIVTLTYLGGERV--------  154 (257)
T ss_pred             hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHH-HHHHHHHHhcccCceEEEEcccCCccC--------
Confidence             4679999999986531     1   111223456778888764 444444321  1138999999765321        


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                        ......|+.+|...+.+.+.+.       .++..+.|+.+-.+-.... . ... .... ......+       ...+
T Consensus       155 --~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-~-~~~-~~~~-~~~~~~p-------~~r~  221 (257)
T PRK08594        155 --VQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGV-G-GFN-SILK-EIEERAP-------LRRT  221 (257)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhh-c-ccc-HHHH-HHhhcCC-------cccc
Confidence              1124589999999999887643       3466788888754321000 0 000 0111 1111111       1235


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ...+|+|+++++++.....  ...+.++.+.+|
T Consensus       222 ~~p~~va~~~~~l~s~~~~--~~tG~~~~~dgg  252 (257)
T PRK08594        222 TTQEEVGDTAAFLFSDLSR--GVTGENIHVDSG  252 (257)
T ss_pred             CCHHHHHHHHHHHcCcccc--cccceEEEECCc
Confidence            6789999999998865322  112346666654

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=6.5e-15  Score=124.23  Aligned_cols=220  Identities=17%  Similarity=0.124  Sum_probs=136.6

Q ss_pred             CCcEEEEEcCCC--hhhHHHHHHHhhccCCCceEEEecCCCC---ChhhhhhhCCCcceEEEeeCCCcccHHHHHHH---
Q 020880            2 SKKRVLVVGGTG--YLGQHLLQGLSEIEGKPYDVAATHHSTP---LPQLLLDALPHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         2 ~~~~ilItGatG--~IG~~l~~~L~~~g~~v~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      ++|+++||||++  -||.++++.|+++|   ++|+...|+..   ..+.+.... ....++.+|++|+++++++++.   
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G---~~vil~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREG---AELAFTYQNDKLKGRVEEFAAQL-GSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCC---CEEEEEecchhHHHHHHHHHhcc-CCceEeecCCCCHHHHHHHHHHHHh
Confidence            457899999985  89999999999999   78888877631   112222222 2355688999999998887754   


Q ss_pred             -hCCCCEEEECCCccCcc---------ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcc
Q 020880           74 -FGQPDVVVNCAALSVPR---------VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                       ++++|++||+||.....         .+.++++..+++|+.+.+ .+.+++...  +-.++|++||.....+       
T Consensus        81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~g~Iv~iss~~~~~~-------  152 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFV-AMAKACRSMLNPGSALLTLSYLGAERA-------  152 (262)
T ss_pred             hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHH-HHHHHHHHHhcCCcEEEEEecCCCCCC-------
Confidence             45799999999975321         112234466788988874 555554321  1148999998764321       


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                         ......|+.+|...+.+.+.+.       .++..+.|+.+--+-... . ... ..... ......+.       ..
T Consensus       153 ---~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~-~~~-~~~~~-~~~~~~p~-------~r  218 (262)
T PRK07984        153 ---IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG-I-KDF-RKMLA-HCEAVTPI-------RR  218 (262)
T ss_pred             ---CCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhc-C-Cch-HHHHH-HHHHcCCC-------cC
Confidence               1124589999999999887653       345567787774321100 0 000 01111 11111111       23


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +...+|+++++++++.....  ...+..+.+.++.
T Consensus       219 ~~~pedva~~~~~L~s~~~~--~itG~~i~vdgg~  251 (262)
T PRK07984        219 TVTIEDVGNSAAFLCSDLSA--GISGEVVHVDGGF  251 (262)
T ss_pred             CCCHHHHHHHHHHHcCcccc--cccCcEEEECCCc
Confidence            57889999999999875322  1234477776653

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=5.4e-15  Score=124.87  Aligned_cols=221  Identities=15%  Similarity=0.110  Sum_probs=137.6

Q ss_pred             CCCcEEEEEcC--CChhhHHHHHHHhhccCCCceEEEecCCCCC---hhhhhhhCCCcceEEEeeCCCcccHHHHHHH--
Q 020880            1 MSKKRVLVVGG--TGYLGQHLLQGLSEIEGKPYDVAATHHSTPL---PQLLLDALPHSFVFFDVDLKSGSGFDAVALK--   73 (320)
Q Consensus         1 m~~~~ilItGa--tG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   73 (320)
                      |.+|+++||||  ++-||.+++++|+++|   ++|++..|....   .+.+....+ ....+.+|++|++++.++++.  
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G---~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~   79 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQG---AELAFTYVVDKLEERVRKMAAELD-SELVFRCDVASDDEINQVFADLG   79 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEcCcHHHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHH
Confidence            34679999997  6799999999999999   888877765321   122222222 345689999999998877653  


Q ss_pred             --hCCCCEEEECCCccCcc---------ccccCchhhhhccccccHHHHHhhhhh---ccCceEEEeechhhhcccCCCC
Q 020880           74 --FGQPDVVVNCAALSVPR---------VCENDPDSAMSINVPSSLVNWLSSFTE---NKENLLIHLSTDQVYEGVKSFY  139 (320)
Q Consensus        74 --~~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~Ss~~vy~~~~~~~  139 (320)
                        ++++|++||+||.....         ......+..+++|+.+.+ .+.+++..   .+..++|++||...+...    
T Consensus        80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~-~l~~~~~p~m~~~~g~Iv~iss~~~~~~~----  154 (261)
T PRK08690         80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLP-ALAKAARPMMRGRNSAIVALSYLGAVRAI----  154 (261)
T ss_pred             HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHH-HHHHHHHHHhhhcCcEEEEEcccccccCC----
Confidence              46899999999986421         011223455678888764 55444322   122489999987654221    


Q ss_pred             cccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcc
Q 020880          140 KEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       140 ~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                            .....|+.+|...+.+.+.+       +.++..+.||.+--+-... ..  ........ +....++       
T Consensus       155 ------~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~-~~--~~~~~~~~-~~~~~p~-------  217 (261)
T PRK08690        155 ------PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG-IA--DFGKLLGH-VAAHNPL-------  217 (261)
T ss_pred             ------CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc-CC--chHHHHHH-HhhcCCC-------
Confidence                  13567999999999877654       3456678888885432100 00  00111111 1111121       


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ..+...+|+|+++.+++.....  -..+.++-+.+|.
T Consensus       218 ~r~~~peevA~~v~~l~s~~~~--~~tG~~i~vdgG~  252 (261)
T PRK08690        218 RRNVTIEEVGNTAAFLLSDLSS--GITGEITYVDGGY  252 (261)
T ss_pred             CCCCCHHHHHHHHHHHhCcccC--CcceeEEEEcCCc
Confidence            2367799999999999875322  1234467776653

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=5.2e-15  Score=124.84  Aligned_cols=220  Identities=14%  Similarity=0.077  Sum_probs=138.2

Q ss_pred             CCCcEEEEEcC--CChhhHHHHHHHhhccCCCceEEEecCC---CCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH--
Q 020880            1 MSKKRVLVVGG--TGYLGQHLLQGLSEIEGKPYDVAATHHS---TPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK--   73 (320)
Q Consensus         1 m~~~~ilItGa--tG~IG~~l~~~L~~~g~~v~~v~~~~r~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   73 (320)
                      |+.|+++||||  ++-||.+++++|+++|   ++|+...|.   .+....+....+. ...+.+|++|++++.++++.  
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G---~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~   79 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREG---AELAFTYVGDRFKDRITEFAAEFGS-DLVFPCDVASDEQIDALFASLG   79 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCC---CeEEEEccchHHHHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHHHH
Confidence            34689999996  6799999999999999   788776553   2222333333332 34688999999998877754  


Q ss_pred             --hCCCCEEEECCCccCcc---------ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCc
Q 020880           74 --FGQPDVVVNCAALSVPR---------VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYK  140 (320)
Q Consensus        74 --~~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~  140 (320)
                        ++++|++||+||.....         .+..+++..+++|+.+.+ .+.+++...  +..++|++||....-+      
T Consensus        80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~-~l~~~~lp~m~~~g~Ii~iss~~~~~~------  152 (260)
T PRK06997         80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFP-ALAKAALPMLSDDASLLTLSYLGAERV------  152 (260)
T ss_pred             HHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHH-HHHHHHHHhcCCCceEEEEeccccccC------
Confidence              46899999999975321         122345567889999885 555554321  1248999998764321      


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCccc
Q 020880          141 EEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       141 E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                          ......|+.+|...+.+.+.+.       .++..+.|+.+--+-... .. . ....... +....++       .
T Consensus       153 ----~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~-~-~~~~~~~-~~~~~p~-------~  217 (260)
T PRK06997        153 ----VPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG-IK-D-FGKILDF-VESNAPL-------R  217 (260)
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc-cc-c-hhhHHHH-HHhcCcc-------c
Confidence                1124579999999999877642       345678888775431100 00 0 0011111 1111111       1


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      .+...+|+++++..++.....  ...+.++.+.++
T Consensus       218 r~~~pedva~~~~~l~s~~~~--~itG~~i~vdgg  250 (260)
T PRK06997        218 RNVTIEEVGNVAAFLLSDLAS--GVTGEITHVDSG  250 (260)
T ss_pred             ccCCHHHHHHHHHHHhCcccc--CcceeEEEEcCC
Confidence            257899999999999875321  123447777655

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.66  E-value=4.6e-15  Score=125.22  Aligned_cols=220  Identities=13%  Similarity=0.069  Sum_probs=138.1

Q ss_pred             CCCcEEEEEcCCC--hhhHHHHHHHhhccCCCceEEEecCCCCC---hhhhhhhCCCcceEEEeeCCCcccHHHHHHH--
Q 020880            1 MSKKRVLVVGGTG--YLGQHLLQGLSEIEGKPYDVAATHHSTPL---PQLLLDALPHSFVFFDVDLKSGSGFDAVALK--   73 (320)
Q Consensus         1 m~~~~ilItGatG--~IG~~l~~~L~~~g~~v~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   73 (320)
                      |++|.++||||++  -||.++++.|.++|   ++|+...|+...   ...+....+. ..++.+|++|++++.++++.  
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G---~~v~~~~r~~~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~   81 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHG---AELWFTYQSEVLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIK   81 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcC---CEEEEEeCchHHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHH
Confidence            4568999999997  79999999999999   888888776321   1222222222 23578999999998877754  


Q ss_pred             --hCCCCEEEECCCccCc--------cccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcc
Q 020880           74 --FGQPDVVVNCAALSVP--------RVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        74 --~~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                        ++++|++||+||....        +.+..++...+++|+.+.+ .+++++...  .-.++|++||.......      
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~-~~~~~~~~~m~~~G~Iv~isS~~~~~~~------  154 (260)
T PRK06603         82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLL-ELSRSAEALMHDGGSIVTLTYYGAEKVI------  154 (260)
T ss_pred             HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHH-HHHHHHHhhhccCceEEEEecCccccCC------
Confidence              4679999999986431        1122345677889999875 655554321  11389999997643211      


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                          .....|+.+|...+.+.+.+.       .++..+.||.+-.+-... .. .. ...... .....++       ..
T Consensus       155 ----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~-~~-~~~~~~-~~~~~p~-------~r  219 (260)
T PRK06603        155 ----PNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSA-IG-DF-STMLKS-HAATAPL-------KR  219 (260)
T ss_pred             ----CcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhc-CC-Cc-HHHHHH-HHhcCCc-------CC
Confidence                124579999999999777643       345678888875432100 00 00 111111 1111121       12


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +...+|+|+++++++.....  ...+..+.+.+|
T Consensus       220 ~~~pedva~~~~~L~s~~~~--~itG~~i~vdgG  251 (260)
T PRK06603        220 NTTQEDVGGAAVYLFSELSK--GVTGEIHYVDCG  251 (260)
T ss_pred             CCCHHHHHHHHHHHhCcccc--cCcceEEEeCCc
Confidence            57789999999999875321  112346777665

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.66  E-value=5.2e-15  Score=124.72  Aligned_cols=220  Identities=15%  Similarity=0.127  Sum_probs=138.8

Q ss_pred             CCcEEEEEcCC--ChhhHHHHHHHhhccCCCceEEEecCCCCC--hhhhhhhC---CCcceEEEeeCCCcccHHHHHHHh
Q 020880            2 SKKRVLVVGGT--GYLGQHLLQGLSEIEGKPYDVAATHHSTPL--PQLLLDAL---PHSFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         2 ~~~~ilItGat--G~IG~~l~~~L~~~g~~v~~v~~~~r~~~~--~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      ++|+++||||+  +-||.+++++|.++|   ++|+...|+.+.  .....+..   .....++.+|++|++++.++++.+
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAG---AELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCC---CEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            46899999986  799999999999999   788777654332  11111111   123567899999999988777543


Q ss_pred             ----CCCCEEEECCCccCc-----cc---cccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCc
Q 020880           75 ----GQPDVVVNCAALSVP-----RV---CENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYK  140 (320)
Q Consensus        75 ----~~~d~Vih~a~~~~~-----~~---~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~  140 (320)
                          +++|++||+||....     +.   +..+++..+++|+.+++ .+.+++...  .-.++|++||.....+      
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~-~l~~~~~~~m~~~g~Iv~isS~~~~~~------  154 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLA-PLCKAAKPLMSEGGSIVTLTYLGGVRA------  154 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHH-HHHHHHHHHHhhCCeEEEEeccccccC------
Confidence                679999999997531     11   22345678899999985 555554321  1148999999764321      


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCccc
Q 020880          141 EEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       141 E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                          ......|+.+|...+.+.+.+.       .++..+.||.+--+-.... . .. ..... .+....++       .
T Consensus       155 ----~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~-~-~~-~~~~~-~~~~~~p~-------~  219 (258)
T PRK07370        155 ----IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAV-G-GI-LDMIH-HVEEKAPL-------R  219 (258)
T ss_pred             ----CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcc-c-cc-hhhhh-hhhhcCCc-------C
Confidence                1235689999999999887653       3456788988854421000 0 00 01111 11111111       1


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      .+...+|++.++..++.....  ...+.++.+.++
T Consensus       220 r~~~~~dva~~~~fl~s~~~~--~~tG~~i~vdgg  252 (258)
T PRK07370        220 RTVTQTEVGNTAAFLLSDLAS--GITGQTIYVDAG  252 (258)
T ss_pred             cCCCHHHHHHHHHHHhChhhc--cccCcEEEECCc
Confidence            356789999999999865321  122446766654

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.66  E-value=1.1e-14  Score=122.65  Aligned_cols=219  Identities=16%  Similarity=0.169  Sum_probs=138.2

Q ss_pred             CcEEEEEcC--CChhhHHHHHHHhhccCCCceEEEecCCC--CChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            3 KKRVLVVGG--TGYLGQHLLQGLSEIEGKPYDVAATHHST--PLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         3 ~~~ilItGa--tG~IG~~l~~~L~~~g~~v~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      +|+++||||  ++-||.+++++|+++|   ++|++..|+.  +..+.+.+..+..+.++.+|++|++++.++++.    +
T Consensus         7 ~k~~lItGa~~s~GIG~a~a~~la~~G---~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   83 (256)
T PRK07889          7 GKRILVTGVITDSSIAFHVARVAQEQG---AEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHV   83 (256)
T ss_pred             CCEEEEeCCCCcchHHHHHHHHHHHCC---CEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence            479999999  8999999999999999   8898888764  223344344444567899999999998877654    4


Q ss_pred             CCCCEEEECCCccCc-----ccc---ccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCC
Q 020880           75 GQPDVVVNCAALSVP-----RVC---ENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~-----~~~---~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      +++|++||+||....     +..   .++.+..+++|+.+++ .+.+++...  .-.++|++|+....+           
T Consensus        84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~-~l~~~~~~~m~~~g~Iv~is~~~~~~-----------  151 (256)
T PRK07889         84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLK-SLAKALLPLMNEGGSIVGLDFDATVA-----------  151 (256)
T ss_pred             CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHhcccCceEEEEeeccccc-----------
Confidence            679999999997532     111   2233456899999875 555554321  113789887643211           


Q ss_pred             CCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      ......|+.||...+.+.+.+.       .++..+.||.+--+-.... . .. .. ....+....++.      +.+..
T Consensus       152 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-~-~~-~~-~~~~~~~~~p~~------~~~~~  221 (256)
T PRK07889        152 WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAI-P-GF-EL-LEEGWDERAPLG------WDVKD  221 (256)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcc-c-Cc-HH-HHHHHHhcCccc------cccCC
Confidence            1124578999999999777643       3456688887754321100 0 00 01 111111111211      13578


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      .+|+|++++.++.....  ...+.++.+.++
T Consensus       222 p~evA~~v~~l~s~~~~--~~tG~~i~vdgg  250 (256)
T PRK07889        222 PTPVARAVVALLSDWFP--ATTGEIVHVDGG  250 (256)
T ss_pred             HHHHHHHHHHHhCcccc--cccceEEEEcCc
Confidence            99999999999875322  122446777654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=9.3e-15  Score=133.10  Aligned_cols=216  Identities=15%  Similarity=0.131  Sum_probs=139.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC--hhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----C
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL--PQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----G   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~   75 (320)
                      .+++++||||+|.||..+++.|.++|   ++|+++.|+...  ...+....  ...++.+|++|.+++..+++.+    +
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~G---a~vi~~~~~~~~~~l~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDG---AHVVCLDVPAAGEALAAVANRV--GGTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCccHHHHHHHHHHc--CCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            35799999999999999999999999   888888885322  22222222  2356889999999887776543    4


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhccC----ceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTENKE----NLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~----~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++|+|||+||.....    ......+..+++|+.+++ ++.+++.....    .+||++||...+....          .
T Consensus       284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~-~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~----------~  352 (450)
T PRK08261        284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPL-RITEALLAAGALGDGGRIVGVSSISGIAGNR----------G  352 (450)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHhhhhcCCCEEEEECChhhcCCCC----------C
Confidence            689999999976432    122345677889999996 88888865322    5899999987653221          3


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+++.+       +.....+.|+.+--+-.     ..+.. ........-..       ....--.+|
T Consensus       353 ~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~-----~~~~~-~~~~~~~~~~~-------l~~~~~p~d  419 (450)
T PRK08261        353 QTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMT-----AAIPF-ATREAGRRMNS-------LQQGGLPVD  419 (450)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhh-----hccch-hHHHHHhhcCC-------cCCCCCHHH
Confidence            568999999887766654       33566788887632111     11110 01111100001       111234679


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +++++.+++.....  ...+.++.++++
T Consensus       420 va~~~~~l~s~~~~--~itG~~i~v~g~  445 (450)
T PRK08261        420 VAETIAWLASPASG--GVTGNVVRVCGQ  445 (450)
T ss_pred             HHHHHHHHhChhhc--CCCCCEEEECCC
Confidence            99999998864321  223457777654

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.64  E-value=6.4e-15  Score=122.84  Aligned_cols=139  Identities=19%  Similarity=0.162  Sum_probs=95.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ++++++||||+|+||++++++|+++|   ++|+++.|++........  .....++.+|++|.+++.+.+   +++|++|
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G---~~Vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~---~~iDilV   84 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKG---AKVIGLTHSKINNSESND--ESPNEWIKWECGKEESLDKQL---ASLDVLI   84 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEECCchhhhhhhc--cCCCeEEEeeCCCHHHHHHhc---CCCCEEE
Confidence            46899999999999999999999999   889988887622211111  112256789999988776554   4899999


Q ss_pred             ECCCccCc-cccccCchhhhhccccccHHHHHhhhhhc-------cCceEEEeechhhhcccCCCCcccCCCCCcchHHH
Q 020880           82 NCAALSVP-RVCENDPDSAMSINVPSSLVNWLSSFTEN-------KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGK  153 (320)
Q Consensus        82 h~a~~~~~-~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-------~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~  153 (320)
                      |+||.... ..+.++++..+++|+.+++ ++++++...       +...++..||.+...+           .....|+.
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-----------~~~~~Y~a  152 (245)
T PRK12367         85 LNHGINPGGRQDPENINKALEINALSSW-RLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-----------ALSPSYEI  152 (245)
T ss_pred             ECCccCCcCCCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcccCCCeEEEEEecccccCC-----------CCCchhHH
Confidence            99997533 2233456788999999986 777765431       1223444455432211           12447999


Q ss_pred             HHHHHHH
Q 020880          154 SKVAAEK  160 (320)
Q Consensus       154 sK~~~e~  160 (320)
                      ||...+.
T Consensus       153 SKaal~~  159 (245)
T PRK12367        153 SKRLIGQ  159 (245)
T ss_pred             HHHHHHH
Confidence            9999864

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.64  E-value=2.2e-14  Score=108.63  Aligned_cols=198  Identities=11%  Similarity=0.092  Sum_probs=139.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |||.|.||||.+|++++++.+.+|   ++|++.+|++++....     ..+..++.|+.|++++.+.+.   +.|+||..
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RG---HeVTAivRn~~K~~~~-----~~~~i~q~Difd~~~~a~~l~---g~DaVIsA   69 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRG---HEVTAIVRNASKLAAR-----QGVTILQKDIFDLTSLASDLA---GHDAVISA   69 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCC---CeeEEEEeChHhcccc-----ccceeecccccChhhhHhhhc---CCceEEEe
Confidence            689999999999999999999999   7899999998776432     356678999999998877776   89999987


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHH--H
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK--F  161 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~--~  161 (320)
                      -+...++     ++......    ...++...+..++.|++.++.+...--.+..--.++|.-|...|...+..+|.  .
T Consensus        70 ~~~~~~~-----~~~~~~k~----~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~  140 (211)
T COG2910          70 FGAGASD-----NDELHSKS----IEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDS  140 (211)
T ss_pred             ccCCCCC-----hhHHHHHH----HHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHH
Confidence            6543221     11111111    14788888888999999998776533222222344555566677888888884  4


Q ss_pred             HHH-HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhh
Q 020880          162 IYE-KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL  233 (320)
Q Consensus       162 ~~~-~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  233 (320)
                      ++. .+.+|+.+-|+..|-|++..+..            .-++........--++|...|.|-+++--++++.
T Consensus       141 Lr~~~~l~WTfvSPaa~f~PGerTg~y------------rlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~  201 (211)
T COG2910         141 LRAEKSLDWTFVSPAAFFEPGERTGNY------------RLGGDQLLVNAKGESRISYADYAIAVLDELEKPQ  201 (211)
T ss_pred             HhhccCcceEEeCcHHhcCCccccCce------------EeccceEEEcCCCceeeeHHHHHHHHHHHHhccc
Confidence            443 35799999999999997632110            0122222223334478999999999999999854

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.64  E-value=1.1e-15  Score=120.15  Aligned_cols=150  Identities=19%  Similarity=0.255  Sum_probs=115.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC--CCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHHh----
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS--TPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~--~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      |+++||||+|-||..++++|+++|.  ..|++..|+  .+....+..   ....++.++++|+++.++++.+++.+    
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~--~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGA--RVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTT--EEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCc--eEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc
Confidence            6899999999999999999999953  688888888  333343322   22467889999999999988877654    


Q ss_pred             CCCCEEEECCCccCcccc----ccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           75 GQPDVVVNCAALSVPRVC----ENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      +.+|++||+||.......    .+..+..+++|+.+.+ .+.+++...+-.++|++||.....+.          .....
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~g~iv~~sS~~~~~~~----------~~~~~  147 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPF-LLAKALLPQGGGKIVNISSIAGVRGS----------PGMSA  147 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHH-HHHHHHHHHTTEEEEEEEEGGGTSSS----------TTBHH
T ss_pred             ccccccccccccccccccccccchhhhhccccccceee-eeeehheeccccceEEecchhhccCC----------CCChh
Confidence            489999999998764222    2334578899999986 77777776555699999998876432          23679


Q ss_pred             HHHHHHHHHHHHHHHc
Q 020880          151 YGKSKVAAEKFIYEKC  166 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~~  166 (320)
                      |+.+|...+.+.+.+.
T Consensus       148 Y~askaal~~~~~~la  163 (167)
T PF00106_consen  148 YSASKAALRGLTQSLA  163 (167)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999988754

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK05599 hypothetical protein; Provisional

Probab=99.63  E-value=2.1e-14  Score=120.16  Aligned_cols=190  Identities=16%  Similarity=0.207  Sum_probs=127.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---C-CcceEEEeeCCCcccHHHHHHH----hC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---P-HSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      |+++||||++-||.+++++|. +|   ++|+...|++++.+.+.+.+   + ..+.++.+|++|+++++++++.    ++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g---~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   76 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HG---EDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAG   76 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CC---CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence            579999999999999999998 58   88999999877665544332   2 2467889999999998877654    35


Q ss_pred             CCCEEEECCCccCccc----cccCchhhhhccccccHHHHH----hhhhhcc-CceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWL----SSFTENK-ENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l----~~~~~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|++||+||......    ...+......+|+.+.+ .++    ..+.+.+ -.++|++||...+-+.          .
T Consensus        77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~----------~  145 (246)
T PRK05599         77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQV-SMLTVLADELRAQTAPAAIVAFSSIAGWRAR----------R  145 (246)
T ss_pred             CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHH-HHHHHHHHHHHhcCCCCEEEEEeccccccCC----------c
Confidence            7999999999864321    11122344567777664 333    3343332 3489999998654221          1


Q ss_pred             CcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      ....|+.+|...+.+.+.+.       .++..+.||.+..+-..                 ...+...       ....+
T Consensus       146 ~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~-----------------~~~~~~~-------~~~pe  201 (246)
T PRK05599        146 ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTT-----------------GMKPAPM-------SVYPR  201 (246)
T ss_pred             CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhc-----------------CCCCCCC-------CCCHH
Confidence            35589999999998777643       23455777766543110                 0000000       14689


Q ss_pred             HHHHHHHHHHhhh
Q 020880          220 DVVKIILALTNRW  232 (320)
Q Consensus       220 D~a~~~~~~~~~~  232 (320)
                      |+|++++.++...
T Consensus       202 ~~a~~~~~~~~~~  214 (246)
T PRK05599        202 DVAAAVVSAITSS  214 (246)
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999999874

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.60  E-value=7.4e-15  Score=123.75  Aligned_cols=160  Identities=14%  Similarity=0.140  Sum_probs=113.3

Q ss_pred             EEEEEcCCChhhHHHHHHHhh----ccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHHhC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSE----IEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~----~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      .++||||+|.||.+++++|.+    .|   ++|+++.|+.+......+.+     +..+.++.+|++|+++++++++.+.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g---~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   78 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPG---SVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALR   78 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCC---cEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHH
Confidence            589999999999999999987    68   88999999876655544322     2357788999999998887775431


Q ss_pred             --------CCCEEEECCCccCcc---c----cccCchhhhhccccccHHHHHhhh----hhc-c-CceEEEeechhhhcc
Q 020880           76 --------QPDVVVNCAALSVPR---V----CENDPDSAMSINVPSSLVNWLSSF----TEN-K-ENLLIHLSTDQVYEG  134 (320)
Q Consensus        76 --------~~d~Vih~a~~~~~~---~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~-~-~~~~v~~Ss~~vy~~  134 (320)
                              +.|+|||+||.....   .    ...+.+..+++|+.+++ .+.+.+    ++. + ..++|++||...+.+
T Consensus        79 ~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~-~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~  157 (256)
T TIGR01500        79 ELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSML-CLTSSVLKAFKDSPGLNRTVVNISSLCAIQP  157 (256)
T ss_pred             hccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHH-HHHHHHHHHHhhcCCCCCEEEEECCHHhCCC
Confidence                    136999999974321   1    11234578899999985 444443    332 2 248999999876532


Q ss_pred             cCCCCcccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccc
Q 020880          135 VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIY  178 (320)
Q Consensus       135 ~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~  178 (320)
                      .          .....|+.+|...+.+.+.+.       ..+..+.||.+-
T Consensus       158 ~----------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~  198 (256)
T TIGR01500       158 F----------KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLD  198 (256)
T ss_pred             C----------CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCccc
Confidence            2          235689999999999887653       234567787774

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.59  E-value=8.8e-14  Score=120.43  Aligned_cols=213  Identities=15%  Similarity=0.121  Sum_probs=137.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh-hC-CCcceEEEeeCCCccc-HHHHHHHhC-CC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-AL-PHSFVFFDVDLKSGSG-FDAVALKFG-QP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~-~~-~~~~~~~~~Dl~d~~~-~~~~~~~~~-~~   77 (320)
                      ++++|||+||||.+|+-+++.|+++|   +.|.+++|+.+++..+.. .. ......+..|...+.+ +..+.+.+. ..
T Consensus        78 ~~~~VlVvGatG~vG~~iv~~llkrg---f~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~  154 (411)
T KOG1203|consen   78 KPTTVLVVGATGKVGRRIVKILLKRG---FSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV  154 (411)
T ss_pred             CCCeEEEecCCCchhHHHHHHHHHCC---CeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccc
Confidence            36799999999999999999999999   899999999888776655 11 1233345555544433 233333221 24


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHH
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVA  157 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~  157 (320)
                      .+++-|++-.....   +-...+.+...|+. |++++|+..|++|+|++||+..-.....    .....-...+..+|..
T Consensus       155 ~~v~~~~ggrp~~e---d~~~p~~VD~~g~k-nlvdA~~~aGvk~~vlv~si~~~~~~~~----~~~~~~~~~~~~~k~~  226 (411)
T KOG1203|consen  155 VIVIKGAGGRPEEE---DIVTPEKVDYEGTK-NLVDACKKAGVKRVVLVGSIGGTKFNQP----PNILLLNGLVLKAKLK  226 (411)
T ss_pred             eeEEecccCCCCcc---cCCCcceecHHHHH-HHHHHHHHhCCceEEEEEeecCcccCCC----chhhhhhhhhhHHHHh
Confidence            46666665432221   22334567777885 9999999999999999998875322111    0000002244589999


Q ss_pred             HHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccc
Q 020880          158 AEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED  236 (320)
Q Consensus       158 ~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  236 (320)
                      +|+++++.+.+++|+|++...-.....   ...        .....+....+++.--.|...|+|++++.++.++....
T Consensus       227 ~e~~~~~Sgl~ytiIR~g~~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~  294 (411)
T KOG1203|consen  227 AEKFLQDSGLPYTIIRPGGLEQDTGGQ---REV--------VVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATF  294 (411)
T ss_pred             HHHHHHhcCCCcEEEeccccccCCCCc---cee--------cccCccccccccccceeeehhhHHHHHHHHHhhhhhcc
Confidence            999999999999999999886543210   000        00111222222221125788999999999998876554

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.59  E-value=3.3e-14  Score=122.44  Aligned_cols=165  Identities=16%  Similarity=0.122  Sum_probs=111.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC----------Chhhhh---hhCCCcceEEEeeCCCcccHH
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP----------LPQLLL---DALPHSFVFFDVDLKSGSGFD   68 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~----------~~~~~~---~~~~~~~~~~~~Dl~d~~~~~   68 (320)
                      .+|+++||||++.||.+++++|++.|   ++|++..|+..          ......   ...+..+.++.+|++|+++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~   83 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAG---ATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR   83 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            36899999999999999999999999   88999888742          222221   222345667899999999988


Q ss_pred             HHHHH----hCCCCEEEECC-CccC-----ccc---cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhh
Q 020880           69 AVALK----FGQPDVVVNCA-ALSV-----PRV---CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQV  131 (320)
Q Consensus        69 ~~~~~----~~~~d~Vih~a-~~~~-----~~~---~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~v  131 (320)
                      .+++.    ++++|++||+| |...     .+.   ...+....+++|+.+.+ .+.+++    .+.+-.+||++||...
T Consensus        84 ~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~lp~m~~~~~g~IV~isS~~~  162 (305)
T PRK08303         84 ALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHL-ITSHFALPLLIRRPGGLVVEITDGTA  162 (305)
T ss_pred             HHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHH-HHHHHHHHHhhhCCCcEEEEECCccc
Confidence            77654    46899999999 6421     111   11234466788988875 444444    3333348999998543


Q ss_pred             -hcccCCCCcccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccc
Q 020880          132 -YEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIY  178 (320)
Q Consensus       132 -y~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~  178 (320)
                       ++..        +......|+.+|.....+.+.+.       .++..+.||.+-
T Consensus       163 ~~~~~--------~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~  209 (305)
T PRK08303        163 EYNAT--------HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLR  209 (305)
T ss_pred             cccCc--------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccc
Confidence             2211        01124579999999999877543       345567777663

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.58  E-value=4.4e-14  Score=116.56  Aligned_cols=161  Identities=12%  Similarity=0.104  Sum_probs=113.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHH----HhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVAL----KFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----~~~   75 (320)
                      +|+++||||++-||..++++|.++|   ++|+...|+.++.+...+.   .+..+..+.+|++|+++++++++    .++
T Consensus         5 ~k~~lVtGas~GIG~aia~~la~~G---~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          5 SSIILITSAGSVLGRTISCHFARLG---ATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CeEEEEECCccHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999999   8899999987765544332   23456678899999999877765    345


Q ss_pred             -CCCEEEECCCccCcc--cccc---CchhhhhccccccHHHH----Hhhhhhcc-CceEEEeechhhhcccCCCCcccCC
Q 020880           76 -QPDVVVNCAALSVPR--VCEN---DPDSAMSINVPSSLVNW----LSSFTENK-ENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        76 -~~d~Vih~a~~~~~~--~~~~---~~~~~~~~n~~~~~~~~----l~~~~~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                       ++|++||+||.....  ..+.   +....+.+|+.+.+ .+    +..+.+.+ -..+|++||...+            
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~m~~~~~~g~Iv~isS~~~~------------  148 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLF-TYGQVAAERMRKRNKKGVIVNVISHDDH------------  148 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCceEEEEecCCCC------------
Confidence             799999999854221  1111   22345566776654 33    33444332 3489999986432            


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccC
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGP  180 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~  180 (320)
                       .+...|+.+|...+.+.+..       +.++..+.||.+-.+
T Consensus       149 -~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        149 -QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             -CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence             12457999999999977664       345677888887655

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.57  E-value=1.1e-14  Score=109.27  Aligned_cols=158  Identities=20%  Similarity=0.188  Sum_probs=119.4

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |.||..||.||||..|+.|++++++.+.- ..|+++.|++..-..    -.+.+.....|...   +.+.++.+.++|+.
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~F-SKV~~i~RR~~~d~a----t~k~v~q~~vDf~K---l~~~a~~~qg~dV~   87 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQF-SKVYAILRRELPDPA----TDKVVAQVEVDFSK---LSQLATNEQGPDVL   87 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccc-eeEEEEEeccCCCcc----ccceeeeEEechHH---HHHHHhhhcCCceE
Confidence            66899999999999999999999999854 678988888532211    12344445666655   44555555599999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK  160 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  160 (320)
                      |.|-|.....   .-.+..+++.-+..+ .+++++++.||++|+.+||...-.+            ..--|-+.|-+.|+
T Consensus        88 FcaLgTTRgk---aGadgfykvDhDyvl-~~A~~AKe~Gck~fvLvSS~GAd~s------------SrFlY~k~KGEvE~  151 (238)
T KOG4039|consen   88 FCALGTTRGK---AGADGFYKVDHDYVL-QLAQAAKEKGCKTFVLVSSAGADPS------------SRFLYMKMKGEVER  151 (238)
T ss_pred             EEeecccccc---cccCceEeechHHHH-HHHHHHHhCCCeEEEEEeccCCCcc------------cceeeeeccchhhh
Confidence            9988876442   224556667766665 8999999999999999999875321            23468899999999


Q ss_pred             HHHHHc-CCeeEEeecccccCCC
Q 020880          161 FIYEKC-SNFAILRSSIIYGPQT  182 (320)
Q Consensus       161 ~~~~~~-~~~~ilR~~~v~G~~~  182 (320)
                      -+.++. .+++|+|||.+.|...
T Consensus       152 ~v~eL~F~~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  152 DVIELDFKHIIILRPGPLLGERT  174 (238)
T ss_pred             hhhhccccEEEEecCcceecccc
Confidence            888875 4789999999999875

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.57  E-value=6.8e-14  Score=114.96  Aligned_cols=197  Identities=16%  Similarity=0.149  Sum_probs=139.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC--CcceEEEeeCCCcccHHHHHH----HhC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--HSFVFFDVDLKSGSGFDAVAL----KFG   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~----~~~   75 (320)
                      +++.||||||++-+|+.++.+|.++|   ..+...+.+++...+..+...  +.+..+.+|++|.+.+.+..+    +++
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg---~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRG---AKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG  113 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhC---CeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            36799999999999999999999999   778888888777666555432  357889999999998876664    457


Q ss_pred             CCCEEEECCCccCccc----cccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           76 QPDVVVNCAALSVPRV----CENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      .+|++||+||......    +.+.-+..+++|+.+.+   ..++..+.+.+-.++|.++|++.+-+.          ...
T Consensus       114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~----------~gl  183 (300)
T KOG1201|consen  114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGP----------AGL  183 (300)
T ss_pred             CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCC----------ccc
Confidence            8999999999976532    22233577889998864   256666667666699999998865432          236


Q ss_pred             chHHHHHHHHHHHHHHHc----------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          149 NVYGKSKVAAEKFIYEKC----------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~~----------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+|..||.++.-+.+.+.          .+.+.+.|+.+= .+            ++..  ..+.+.      ....+..
T Consensus       184 ~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~-Tg------------mf~~--~~~~~~------l~P~L~p  242 (300)
T KOG1201|consen  184 ADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFIN-TG------------MFDG--ATPFPT------LAPLLEP  242 (300)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecc-cc------------ccCC--CCCCcc------ccCCCCH
Confidence            689999999988666542          234556555552 11            1110  011111      2235788


Q ss_pred             HHHHHHHHHHHhhh
Q 020880          219 RDVVKIILALTNRW  232 (320)
Q Consensus       219 ~D~a~~~~~~~~~~  232 (320)
                      +-+|+.++.++...
T Consensus       243 ~~va~~Iv~ai~~n  256 (300)
T KOG1201|consen  243 EYVAKRIVEAILTN  256 (300)
T ss_pred             HHHHHHHHHHHHcC
Confidence            99999999998874

>PLN00015 protochlorophyllide reductase

Probab=99.56  E-value=3.3e-14  Score=122.97  Aligned_cols=170  Identities=18%  Similarity=0.194  Sum_probs=115.8

Q ss_pred             EEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHHh----CCCCE
Q 020880            7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALKF----GQPDV   79 (320)
Q Consensus         7 lItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~----~~~d~   79 (320)
                      +||||++.||.+++++|+++|.  ++|++..|+.++.......+   ...+.++.+|++|.++++++++.+    +++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGK--WHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            6999999999999999999984  47888888866554444333   235677899999999988877644    47899


Q ss_pred             EEECCCccCcc-----ccccCchhhhhccccccHHHH----Hhhhhhcc--CceEEEeechhhhccc-----CC------
Q 020880           80 VVNCAALSVPR-----VCENDPDSAMSINVPSSLVNW----LSSFTENK--ENLLIHLSTDQVYEGV-----KS------  137 (320)
Q Consensus        80 Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~----l~~~~~~~--~~~~v~~Ss~~vy~~~-----~~------  137 (320)
                      +||+||...+.     .+..+.+..+++|+.+++ .+    +..+.+.+  ..++|++||...+-..     ..      
T Consensus        79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  157 (308)
T PLN00015         79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHF-LLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD  157 (308)
T ss_pred             EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence            99999975321     122345678899999975 44    44444443  3599999998654210     00      


Q ss_pred             ---------------CCcccCCCCCcchHHHHHHHHHHHHHH----H----cCCeeEEeecccccC
Q 020880          138 ---------------FYKEEDEIAPVNVYGKSKVAAEKFIYE----K----CSNFAILRSSIIYGP  180 (320)
Q Consensus       138 ---------------~~~E~~~~~p~~~Y~~sK~~~e~~~~~----~----~~~~~ilR~~~v~G~  180 (320)
                                     ++++ ....+...|+.||...+.+.+.    +    +..+..+.||.|...
T Consensus       158 ~~~~~~~~~~~~~~~~~~~-~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  222 (308)
T PLN00015        158 LRGLAGGLNGLNSSAMIDG-GEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATT  222 (308)
T ss_pred             hhhhhcccCCccchhhccc-cCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCc
Confidence                           0011 1223567899999986665443    3    234677999998643

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.54  E-value=1.4e-13  Score=107.99  Aligned_cols=170  Identities=15%  Similarity=0.174  Sum_probs=117.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHHh---
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      |+.+.|+||||+.-||-.|+++|++.-.- ..++...|+++++....+.   ...+++.++.|+++.+++.++.+++   
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i-~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~i   79 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGI-EVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKI   79 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCc-EEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence            88899999999999999999999975321 3345666667664333332   2578999999999999988877654   


Q ss_pred             ---CCCCEEEECCCccCcccc-----ccCchhhhhccccccH---HHHHhhhhhccCc-----------eEEEeechhhh
Q 020880           75 ---GQPDVVVNCAALSVPRVC-----ENDPDSAMSINVPSSL---VNWLSSFTENKEN-----------LLIHLSTDQVY  132 (320)
Q Consensus        75 ---~~~d~Vih~a~~~~~~~~-----~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~-----------~~v~~Ss~~vy  132 (320)
                         .+.+.++++||....-..     ..-....+++|+.+++   +.++..+++...+           .+|++||.+.-
T Consensus        80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s  159 (249)
T KOG1611|consen   80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS  159 (249)
T ss_pred             cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc
Confidence               378999999998643111     1123467899999874   1233333332222           69999987653


Q ss_pred             cccCCCCcccCCCCCcchHHHHHHHHHHHHHHHcCC-------eeEEeecccc
Q 020880          133 EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSN-------FAILRSSIIY  178 (320)
Q Consensus       133 ~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~-------~~ilR~~~v~  178 (320)
                      -+       .....+...|..||.+.-.+.+....+       ++.+.||+|-
T Consensus       160 ~~-------~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~  205 (249)
T KOG1611|consen  160 IG-------GFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQ  205 (249)
T ss_pred             cC-------CCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEE
Confidence            11       122346789999999999998886542       3558888883

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.54  E-value=9.7e-14  Score=108.77  Aligned_cols=220  Identities=16%  Similarity=0.113  Sum_probs=156.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      .+.++.|+.||.|+++++...+.+   ..|..+.|+..  +.+++..+..++++.+|.....-+.....   ++..++-+
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv---~svgilsen~~--k~~l~sw~~~vswh~gnsfssn~~k~~l~---g~t~v~e~  124 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVV---HSVGILSENEN--KQTLSSWPTYVSWHRGNSFSSNPNKLKLS---GPTFVYEM  124 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhc---eeeeEeecccC--cchhhCCCcccchhhccccccCcchhhhc---CCcccHHH
Confidence            367899999999999999999999   78888888855  45556666778888888877665665555   88999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIY  163 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~  163 (320)
                      ++.+.      +...+.++|-.... +..+++.+.|+++|+|+|... ||-         +..-...|-.+|.++|..+.
T Consensus       125 ~ggfg------n~~~m~~ing~ani-~a~kaa~~~gv~~fvyISa~d-~~~---------~~~i~rGY~~gKR~AE~Ell  187 (283)
T KOG4288|consen  125 MGGFG------NIILMDRINGTANI-NAVKAAAKAGVPRFVYISAHD-FGL---------PPLIPRGYIEGKREAEAELL  187 (283)
T ss_pred             hcCcc------chHHHHHhccHhhH-HHHHHHHHcCCceEEEEEhhh-cCC---------CCccchhhhccchHHHHHHH
Confidence            88653      33556667776664 899999999999999999654 321         11112369999999998665


Q ss_pred             H-HcCCeeEEeecccccCCCCCCCCCCCh---HHHHHH----HHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhcc
Q 020880          164 E-KCSNFAILRSSIIYGPQTISPVPKSLP---IQWIDS----VLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE  235 (320)
Q Consensus       164 ~-~~~~~~ilR~~~v~G~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  235 (320)
                      + +..+-++||||.+||...-.. ....+   ...+..    +.+.-..+++.|.-.+..+.++++|.+.+.+++++   
T Consensus       188 ~~~~~rgiilRPGFiyg~R~v~g-~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp---  263 (283)
T KOG4288|consen  188 KKFRFRGIILRPGFIYGTRNVGG-IKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDP---  263 (283)
T ss_pred             HhcCCCceeeccceeecccccCc-ccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCC---
Confidence            5 566789999999999853211 11111   111111    11223346666777888999999999999999885   


Q ss_pred             ccccCceeEecCCCCcCHHHHHHHHHH
Q 020880          236 DKQMQLLLNVGGPDRVSRVQMAEVVAE  262 (320)
Q Consensus       236 ~~~~~~~~n~~~~~~~s~~e~~~~i~~  262 (320)
                            .|-    ..+++.|+.++-.+
T Consensus       264 ------~f~----Gvv~i~eI~~~a~k  280 (283)
T KOG4288|consen  264 ------DFK----GVVTIEEIKKAAHK  280 (283)
T ss_pred             ------CcC----ceeeHHHHHHHHHH
Confidence                  222    24777777776544

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.50  E-value=5.1e-13  Score=113.92  Aligned_cols=177  Identities=18%  Similarity=0.179  Sum_probs=129.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHHh--
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALKF--   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~--   74 (320)
                      ..+.++|||||.-||..++++|..+|   .+|+..+|+.++.+...+..     ...+.++++|+++.++++.+.+.+  
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~G---a~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRG---AHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            35799999999999999999999999   89999999976554444332     356778999999999998877655  


Q ss_pred             --CCCCEEEECCCccCccc--cccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhccc---CCCCcccCC
Q 020880           75 --GQPDVVVNCAALSVPRV--CENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGV---KSFYKEEDE  144 (320)
Q Consensus        75 --~~~d~Vih~a~~~~~~~--~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~---~~~~~E~~~  144 (320)
                        ...|++||+||.+.++.  .....+..+.+|..|.+   ..++..+++....|+|++||..- +..   +....|...
T Consensus       111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~  189 (314)
T KOG1208|consen  111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAK  189 (314)
T ss_pred             cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhcc
Confidence              47899999999987654  22346788999999874   24556666665469999999865 221   112233332


Q ss_pred             -CCCcchHHHHHHHHHHHHHHHc------CCeeEEeecccccCCC
Q 020880          145 -IAPVNVYGKSKVAAEKFIYEKC------SNFAILRSSIIYGPQT  182 (320)
Q Consensus       145 -~~p~~~Y~~sK~~~e~~~~~~~------~~~~ilR~~~v~G~~~  182 (320)
                       ......|+.||.....+..++.      .....+.||.|..+.-
T Consensus       190 ~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l  234 (314)
T KOG1208|consen  190 LYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGL  234 (314)
T ss_pred             CccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccce
Confidence             3333369999999988766653      3456799999987754

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.49  E-value=3.1e-13  Score=104.82  Aligned_cols=149  Identities=17%  Similarity=0.176  Sum_probs=113.3

Q ss_pred             CcEEEEEcC-CChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh-----CC
Q 020880            3 KKRVLVVGG-TGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF-----GQ   76 (320)
Q Consensus         3 ~~~ilItGa-tG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   76 (320)
                      .++|||||+ .|-||.+|+++|.++|   +.|++..|+-+.-..+....  ++..+..|+++++.+..+...+     +.
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G---~~V~AtaR~~e~M~~L~~~~--gl~~~kLDV~~~~~V~~v~~evr~~~~Gk   81 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNG---YLVYATARRLEPMAQLAIQF--GLKPYKLDVSKPEEVVTVSGEVRANPDGK   81 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCC---eEEEEEccccchHhhHHHhh--CCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence            478999986 5999999999999999   99999999988877666443  4777999999999988776543     46


Q ss_pred             CCEEEECCCccC-c---cccccCchhhhhccccccHHHHHhhhhh---ccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           77 PDVVVNCAALSV-P---RVCENDPDSAMSINVPSSLVNWLSSFTE---NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        77 ~d~Vih~a~~~~-~---~~~~~~~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      .|+++|+||..- .   +.....-+..+++|+.|.+ ++.++..+   ....+||+++|..+|-+-.          =.+
T Consensus        82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~i-rM~~a~~h~likaKGtIVnvgSl~~~vpfp----------f~~  150 (289)
T KOG1209|consen   82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHI-RMCRALSHFLIKAKGTIVNVGSLAGVVPFP----------FGS  150 (289)
T ss_pred             eEEEEcCCCCCcccccccCCHHHHHhhhccceeeee-hHHHHHHHHHHHccceEEEecceeEEeccc----------hhh
Confidence            899999999742 1   1222344678999999986 66666643   1223899999998875321          145


Q ss_pred             hHHHHHHHHHHHHHHHcC
Q 020880          150 VYGKSKVAAEKFIYEKCS  167 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~~  167 (320)
                      .|..||++...+.+-+..
T Consensus       151 iYsAsKAAihay~~tLrl  168 (289)
T KOG1209|consen  151 IYSASKAAIHAYARTLRL  168 (289)
T ss_pred             hhhHHHHHHHHhhhhcEE
Confidence            899999999998776543

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.49  E-value=2.3e-12  Score=110.29  Aligned_cols=218  Identities=15%  Similarity=0.122  Sum_probs=131.6

Q ss_pred             CCCcEEEEEcC--CChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----------C-----CcceEEEeeC-
Q 020880            1 MSKKRVLVVGG--TGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----------P-----HSFVFFDVDL-   61 (320)
Q Consensus         1 m~~~~ilItGa--tG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----------~-----~~~~~~~~Dl-   61 (320)
                      |++|+++||||  +.-||.++++.|.+.|   .+|++ .|..+..+.+....           .     .....+.+|+ 
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~G---a~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   82 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAG---AEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV   82 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCC---CEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence            35789999999  7999999999999999   78877 55544333322111           0     1134677888 


Q ss_pred             -CCcc------------------cHHHHHH----HhCCCCEEEECCCccC----c--cccccCchhhhhccccccHHHHH
Q 020880           62 -KSGS------------------GFDAVAL----KFGQPDVVVNCAALSV----P--RVCENDPDSAMSINVPSSLVNWL  112 (320)
Q Consensus        62 -~d~~------------------~~~~~~~----~~~~~d~Vih~a~~~~----~--~~~~~~~~~~~~~n~~~~~~~~l  112 (320)
                       .+++                  ++.++++    .++++|++|||||...    +  ..+..+++..+++|+.+.+ .+.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~-~l~  161 (303)
T PLN02730         83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFV-SLL  161 (303)
T ss_pred             cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHH-HHH
Confidence             4444                  5555554    4467999999997432    1  2233456788999999985 555


Q ss_pred             hhhhhc---cCceEEEeechhhhcccCCCCcccCCCCC-c-chHHHHHHHHHHHHHHHcC--------CeeEEeeccccc
Q 020880          113 SSFTEN---KENLLIHLSTDQVYEGVKSFYKEEDEIAP-V-NVYGKSKVAAEKFIYEKCS--------NFAILRSSIIYG  179 (320)
Q Consensus       113 ~~~~~~---~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p-~-~~Y~~sK~~~e~~~~~~~~--------~~~ilR~~~v~G  179 (320)
                      +++...   + .++|++||.......           | . ..|+.+|...+.+.+.+..        ++..+-||.+--
T Consensus       162 ~~~~p~m~~~-G~II~isS~a~~~~~-----------p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T  229 (303)
T PLN02730        162 QHFGPIMNPG-GASISLTYIASERII-----------PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGS  229 (303)
T ss_pred             HHHHHHHhcC-CEEEEEechhhcCCC-----------CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccC
Confidence            554331   2 389999997654221           2 2 3799999999997765432        345577776643


Q ss_pred             CCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +-... ..  ....... ......++       ..+...+|++.++++++.....  ...+..+.+.++
T Consensus       230 ~~~~~-~~--~~~~~~~-~~~~~~pl-------~r~~~peevA~~~~fLaS~~a~--~itG~~l~vdGG  285 (303)
T PLN02730        230 RAAKA-IG--FIDDMIE-YSYANAPL-------QKELTADEVGNAAAFLASPLAS--AITGATIYVDNG  285 (303)
T ss_pred             chhhc-cc--ccHHHHH-HHHhcCCC-------CCCcCHHHHHHHHHHHhCcccc--CccCCEEEECCC
Confidence            32110 00  0011111 11111111       1246789999999999865322  112446666654

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.49  E-value=6.4e-13  Score=109.73  Aligned_cols=164  Identities=17%  Similarity=0.181  Sum_probs=124.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-CCcceEEEeeCCCcccHHHHHHHh------C
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-PHSFVFFDVDLKSGSGFDAVALKF------G   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~------~   75 (320)
                      .|-|||||+-.-.|..||++|.++|   +.|++.+-.++.++.+.... .++...++.|++++++++++.+.+      .
T Consensus        29 ~k~VlITGCDSGfG~~LA~~L~~~G---f~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   29 DKAVLITGCDSGFGRLLAKKLDKKG---FRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             CcEEEEecCCcHHHHHHHHHHHhcC---CEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            5779999999999999999999999   99999998877777776666 677888999999999998877533      2


Q ss_pred             CCCEEEECCCccCc--c---ccccCchhhhhccccccHH---HHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVP--R---VCENDPDSAMSINVPSSLV---NWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~--~---~~~~~~~~~~~~n~~~~~~---~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +.=.|||+||....  +   ...++....+++|+.|++.   .++...++..- |+|++||.+-=  .        +...
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arG-RvVnvsS~~GR--~--------~~p~  174 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARG-RVVNVSSVLGR--V--------ALPA  174 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccC-eEEEecccccC--c--------cCcc
Confidence            46689999996533  1   1224567889999999862   34444445443 99999998741  1        1123


Q ss_pred             cchHHHHHHHHHHHHH-------HHcCCeeEEeecccccCC
Q 020880          148 VNVYGKSKVAAEKFIY-------EKCSNFAILRSSIIYGPQ  181 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~-------~~~~~~~ilR~~~v~G~~  181 (320)
                      ..+|..||...|.+..       .+|.++.++-|| +|-.+
T Consensus       175 ~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG-~f~T~  214 (322)
T KOG1610|consen  175 LGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG-FFKTN  214 (322)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC-ccccc
Confidence            6689999999998554       356788899999 44433

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.46  E-value=7.2e-12  Score=105.32  Aligned_cols=228  Identities=16%  Similarity=0.098  Sum_probs=146.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC------CCcceEEEeeCCCcccHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL------PHSFVFFDVDLKSGSGFDAVA----   71 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~----   71 (320)
                      .+|.++||||+.-||.+++.+|.+.|   .+|+...|+++........+      +..+..+.+|+++.++.++++    
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~G---a~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAG---AKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999   89999999987654443322      235777999999888765554    


Q ss_pred             HH-hCCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcc
Q 020880           72 LK-FGQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        72 ~~-~~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                      ++ ++++|+++|+||....     +.+.+.++..+++|+.|....+..++.    +.+-..++++||...+.....    
T Consensus        84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~----  159 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPG----  159 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC----
Confidence            44 4689999999998653     234456678899999964334444443    334457899988876543211    


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                           +...|+.+|...+++.+...       .++-.+-|+.|..+-......... ...+..........+     .-.
T Consensus       160 -----~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~-~~~~~~~~~~~~~~p-----~gr  228 (270)
T KOG0725|consen  160 -----SGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGE-MEEFKEATDSKGAVP-----LGR  228 (270)
T ss_pred             -----CcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccch-hhHHhhhhccccccc-----cCC
Confidence                 11689999999999888753       355678888777654110000000 011111100001111     123


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +.-.+|++.++..++....+  -..+..+-+.++.
T Consensus       229 ~g~~~eva~~~~fla~~~as--yitG~~i~vdgG~  261 (270)
T KOG0725|consen  229 VGTPEEVAEAAAFLASDDAS--YITGQTIIVDGGF  261 (270)
T ss_pred             ccCHHHHHHhHHhhcCcccc--cccCCEEEEeCCE
Confidence            56789999999888776432  1223355555543

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.45  E-value=2.1e-12  Score=108.41  Aligned_cols=162  Identities=19%  Similarity=0.225  Sum_probs=112.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC--hhhhhhhCC----CcceEEEeeCCC-cccHHHHHH-
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL--PQLLLDALP----HSFVFFDVDLKS-GSGFDAVAL-   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~--~~~~~~~~~----~~~~~~~~Dl~d-~~~~~~~~~-   72 (320)
                      |++|+||||||++-||..+++.|.++|   ..|+...|+.+.  .........    ....+..+|+++ .+++..+++ 
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~   79 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREG---ARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAA   79 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHH
Confidence            357899999999999999999999999   788877777654  222222222    356677799998 777665554 


Q ss_pred             ---HhCCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhhhhccCc--eEEEeechhhhcccCCCCccc
Q 020880           73 ---KFGQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFTENKEN--LLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        73 ---~~~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~--~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                         .++++|+++|+||....     +......+..+.+|+.+.+ .+.+.+. ...+  ++|++||.... .....    
T Consensus        80 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~-~~~~~~~-~~~~~~~Iv~isS~~~~-~~~~~----  152 (251)
T COG1028          80 AEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAF-LLTRAAL-PLMKKQRIVNISSVAGL-GGPPG----  152 (251)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHH-HHHHHHH-HhhhhCeEEEECCchhc-CCCCC----
Confidence               34569999999998642     1222455688899998875 5554222 1111  89999998765 32210    


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeeccc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSII  177 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v  177 (320)
                           ...|+.||...+.+.+.+       +.+...+.|+.+
T Consensus       153 -----~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~  189 (251)
T COG1028         153 -----QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYI  189 (251)
T ss_pred             -----cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccC
Confidence                 468999999999876654       334667888833

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.44  E-value=2e-11  Score=93.52  Aligned_cols=201  Identities=20%  Similarity=0.265  Sum_probs=138.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCC--cceEEEeeCCCcccHHHHH----HHhCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH--SFVFFDVDLKSGSGFDAVA----LKFGQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~~~~~~----~~~~~   76 (320)
                      .+..+||||+.-||+++++.|...|   ++|....++...++.....++.  ...-+.+|+.++++++..+    +.++.
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~G---arv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKG---ARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcC---cEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999   8999988888777766666643  5556899999999876644    44578


Q ss_pred             CCEEEECCCccCc----cccccCchhhhhccccccHHHHHhhhhh----ccCc--eEEEeechhhhcccCCCCcccCCCC
Q 020880           77 PDVVVNCAALSVP----RVCENDPDSAMSINVPSSLVNWLSSFTE----NKEN--LLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        77 ~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~--~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++++||||....    ....+++++.+.+|+.|.+ ...+++.+    .+..  +||.+||+----.+-          
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvf-l~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~----------  159 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVF-LVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNF----------  159 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhH-HHHHHHHHHHHHhcCCCceEEeehhhhcccccc----------
Confidence            9999999998753    2345678899999999986 55554433    2222  899999974311111          


Q ss_pred             CcchHHHHH--------HHHHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          147 PVNVYGKSK--------VAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       147 p~~~Y~~sK--------~~~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      ..+.|+.+|        .++.+..++ +.++-++-|+.|--|-.     ...+...+..++ ..-|..-       +-..
T Consensus       160 GQtnYAAsK~GvIgftktaArEla~k-nIrvN~VlPGFI~tpMT-----~~mp~~v~~ki~-~~iPmgr-------~G~~  225 (256)
T KOG1200|consen  160 GQTNYAASKGGVIGFTKTAARELARK-NIRVNVVLPGFIATPMT-----EAMPPKVLDKIL-GMIPMGR-------LGEA  225 (256)
T ss_pred             cchhhhhhcCceeeeeHHHHHHHhhc-CceEeEeccccccChhh-----hhcCHHHHHHHH-ccCCccc-------cCCH
Confidence            244566654        444444443 45677788888865532     223333444433 3334432       4568


Q ss_pred             HHHHHHHHHHHhh
Q 020880          219 RDVVKIILALTNR  231 (320)
Q Consensus       219 ~D~a~~~~~~~~~  231 (320)
                      +|+|.+++.+...
T Consensus       226 EevA~~V~fLAS~  238 (256)
T KOG1200|consen  226 EEVANLVLFLASD  238 (256)
T ss_pred             HHHHHHHHHHhcc
Confidence            9999999888743

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.44  E-value=3e-12  Score=106.83  Aligned_cols=201  Identities=12%  Similarity=0.064  Sum_probs=130.6

Q ss_pred             HHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh-CCCCEEEECCCccCccccccCch
Q 020880           19 LLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF-GQPDVVVNCAALSVPRVCENDPD   97 (320)
Q Consensus        19 l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~d~Vih~a~~~~~~~~~~~~~   97 (320)
                      ++++|+++|   ++|++.+|+++...        ...++.+|++|.+++.++++.+ +++|+|||+||...    ..+++
T Consensus         1 ~a~~l~~~G---~~Vv~~~r~~~~~~--------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~~~~   65 (241)
T PRK12428          1 TARLLRFLG---ARVIGVDRREPGMT--------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TAPVE   65 (241)
T ss_pred             ChHHHHhCC---CEEEEEeCCcchhh--------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CCCHH
Confidence            478899999   89999999865432        1345789999999999888754 46999999999753    23567


Q ss_pred             hhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCC-CCccc----------------CCCCCcchHHHHHHHH
Q 020880           98 SAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKS-FYKEE----------------DEIAPVNVYGKSKVAA  158 (320)
Q Consensus        98 ~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~-~~~E~----------------~~~~p~~~Y~~sK~~~  158 (320)
                      ..+++|+.+++ .+++.+...  ...+||++||...|+.... +..|.                .+..+...|+.+|...
T Consensus        66 ~~~~vN~~~~~-~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~  144 (241)
T PRK12428         66 LVARVNFLGLR-HLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEAL  144 (241)
T ss_pred             HhhhhchHHHH-HHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHH
Confidence            88999999986 777777542  1249999999998863211 11111                2344567899999999


Q ss_pred             HHHHHHHc--------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHh
Q 020880          159 EKFIYEKC--------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN  230 (320)
Q Consensus       159 e~~~~~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  230 (320)
                      +.+.+.+.        .++.+++||.+.++-.... ...    .-.......  . .   ....+...+|+|++++.++.
T Consensus       145 ~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~-~~~----~~~~~~~~~--~-~---~~~~~~~pe~va~~~~~l~s  213 (241)
T PRK12428        145 ILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDF-RSM----LGQERVDSD--A-K---RMGRPATADEQAAVLVFLCS  213 (241)
T ss_pred             HHHHHHHHHHhhhccCeEEEEeecCCccCcccccc-hhh----hhhHhhhhc--c-c---ccCCCCCHHHHHHHHHHHcC
Confidence            98765443        3567899999987642110 000    000001000  0 0   11225678999999999885


Q ss_pred             hhhccccccCceeEecCC
Q 020880          231 RWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       231 ~~~~~~~~~~~~~n~~~~  248 (320)
                      ....  ...+..+.+.++
T Consensus       214 ~~~~--~~~G~~i~vdgg  229 (241)
T PRK12428        214 DAAR--WINGVNLPVDGG  229 (241)
T ss_pred             hhhc--CccCcEEEecCc
Confidence            4321  122446666554

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.43  E-value=2.1e-12  Score=99.82  Aligned_cols=163  Identities=14%  Similarity=0.190  Sum_probs=118.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHH----HHhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVA----LKFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----~~~~~~d   78 (320)
                      +.+||||||+.-||..|+++|++.|   -+|+..+|+.+...+.....+ .+....+|+.|.++.+++.    +.+...+
T Consensus         5 gnTiLITGG~sGIGl~lak~f~elg---N~VIi~gR~e~~L~e~~~~~p-~~~t~v~Dv~d~~~~~~lvewLkk~~P~lN   80 (245)
T COG3967           5 GNTILITGGASGIGLALAKRFLELG---NTVIICGRNEERLAEAKAENP-EIHTEVCDVADRDSRRELVEWLKKEYPNLN   80 (245)
T ss_pred             CcEEEEeCCcchhhHHHHHHHHHhC---CEEEEecCcHHHHHHHHhcCc-chheeeecccchhhHHHHHHHHHhhCCchh
Confidence            5699999999999999999999999   789999999887776666543 5666899999998766555    4456889


Q ss_pred             EEEECCCccCccc------cccCchhhhhccccccHHHHHhh----hhhccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           79 VVVNCAALSVPRV------CENDPDSAMSINVPSSLVNWLSS----FTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        79 ~Vih~a~~~~~~~------~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      ++|||||......      ...+.+.-..+|+.+++ ++..+    +.+.....+|.+||.-.|-+...          .
T Consensus        81 vliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API-~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~----------~  149 (245)
T COG3967          81 VLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPI-RLTALLLPHLLRQPEATIINVSSGLAFVPMAS----------T  149 (245)
T ss_pred             eeeecccccchhhccCCcchhhHHHHHHHHhhhhHH-HHHHHHHHHHHhCCCceEEEeccccccCcccc----------c
Confidence            9999999864321      11223456778998885 54444    44444448999999887754322          3


Q ss_pred             chHHHHHHHHHHHHHHH-------cCCeeEEeecccccC
Q 020880          149 NVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGP  180 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~  180 (320)
                      -.|..+|+....+-..+       +.+++=+-|+.|--+
T Consensus       150 PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         150 PVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             ccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            36999999888754332       345555788887654

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.41  E-value=3.8e-12  Score=101.13  Aligned_cols=158  Identities=15%  Similarity=0.181  Sum_probs=105.5

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC---CChhhhh---hhCCCcceEEEeeCCCcccHHHHHHHh----
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST---PLPQLLL---DALPHSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~---~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      +++||||+|-||..+++.|.++|.  .+++.+.|+.   .......   +..+..+.++.+|++|++++.++++.+    
T Consensus         2 tylitGG~gglg~~la~~La~~~~--~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~   79 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGA--RRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF   79 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCC--CEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc
Confidence            589999999999999999999985  6889999982   1222222   223567888999999999999998755    


Q ss_pred             CCCCEEEECCCccCccc-cccC---chhhhhccccccHHHHHhhhhhccCceEEEeechhh-hcccCCCCcccCCCCCcc
Q 020880           75 GQPDVVVNCAALSVPRV-CEND---PDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV-YEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~-~~~~---~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~v-y~~~~~~~~E~~~~~p~~  149 (320)
                      +.++.|||+|+...... ...+   ....+...+.+.. ++.+++.....+.+|.+||+.. +|..           ...
T Consensus        80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~-~L~~~~~~~~l~~~i~~SSis~~~G~~-----------gq~  147 (181)
T PF08659_consen   80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLW-NLHEALENRPLDFFILFSSISSLLGGP-----------GQS  147 (181)
T ss_dssp             S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHH-HHHHHHTTTTTSEEEEEEEHHHHTT-T-----------TBH
T ss_pred             CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHH-HHHHHhhcCCCCeEEEECChhHhccCc-----------chH
Confidence            36789999999864321 1222   2344566677774 8888888888889999999875 5532           366


Q ss_pred             hHHHHHHHHHHHHHHH---cCCeeEEeecc
Q 020880          150 VYGKSKVAAEKFIYEK---CSNFAILRSSI  176 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~---~~~~~ilR~~~  176 (320)
                      .|+..-...+.+.+..   +.+++.+..+.
T Consensus       148 ~YaaAN~~lda~a~~~~~~g~~~~sI~wg~  177 (181)
T PF08659_consen  148 AYAAANAFLDALARQRRSRGLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSEEEEEEE-E
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCEEEEEccc
Confidence            8999998888877653   45666666543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.39  E-value=1.5e-12  Score=108.65  Aligned_cols=210  Identities=21%  Similarity=0.201  Sum_probs=138.4

Q ss_pred             cCC--ChhhHHHHHHHhhccCCCceEEEecCCCCC----hhhhhhhCCCcceEEEeeCCCcccHHHHHH----Hh-CCCC
Q 020880           10 GGT--GYLGQHLLQGLSEIEGKPYDVAATHHSTPL----PQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KF-GQPD   78 (320)
Q Consensus        10 Gat--G~IG~~l~~~L~~~g~~v~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~-~~~d   78 (320)
                      |++  +-||.++++.|+++|   ++|++..|+.++    ...+.+..+  ..++.+|++|++++.++++    .+ +++|
T Consensus         1 g~~~s~GiG~aia~~l~~~G---a~V~~~~~~~~~~~~~~~~l~~~~~--~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD   75 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEG---ANVILTDRNEEKLADALEELAKEYG--AEVIQCDLSDEESVEALFDEAVERFGGRID   75 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTT---EEEEEEESSHHHHHHHHHHHHHHTT--SEEEESCTTSHHHHHHHHHHHHHHHCSSES
T ss_pred             CCCCCCChHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHHHHHcC--CceEeecCcchHHHHHHHHHHHhhcCCCeE
Confidence            667  999999999999999   999999999776    334444444  3369999999998877765    46 7899


Q ss_pred             EEEECCCccCc-----c---ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           79 VVVNCAALSVP-----R---VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        79 ~Vih~a~~~~~-----~---~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      ++||+++...+     +   ...+++...+++|+.+.+ .+++++.+.  .-.++|++||.......          ...
T Consensus        76 ~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~gsii~iss~~~~~~~----------~~~  144 (241)
T PF13561_consen   76 ILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPF-LLAQAALPLMKKGGSIINISSIAAQRPM----------PGY  144 (241)
T ss_dssp             EEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHH-HHHHHHHHHHHHEEEEEEEEEGGGTSBS----------TTT
T ss_pred             EEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCcccccchhhcccC----------ccc
Confidence            99999987654     1   112344677888888875 666665331  11389999998764432          235


Q ss_pred             chHHHHHHHHHHHHHHHc----C----CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          149 NVYGKSKVAAEKFIYEKC----S----NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~~----~----~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ..|+.+|...+.+.+.+.    .    ++-.+.||.+-.+.....   .....+. .......++       ..+...+|
T Consensus       145 ~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~---~~~~~~~-~~~~~~~pl-------~r~~~~~e  213 (241)
T PF13561_consen  145 SAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERI---PGNEEFL-EELKKRIPL-------GRLGTPEE  213 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHH---HTHHHHH-HHHHHHSTT-------SSHBEHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhcc---ccccchh-hhhhhhhcc-------CCCcCHHH
Confidence            589999999999887642    2    345678887754321000   0001111 111112222       23578999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +|.+++.|+.....  -..+.++.+.+|
T Consensus       214 vA~~v~fL~s~~a~--~itG~~i~vDGG  239 (241)
T PF13561_consen  214 VANAVLFLASDAAS--YITGQVIPVDGG  239 (241)
T ss_dssp             HHHHHHHHHSGGGT--TGTSEEEEESTT
T ss_pred             HHHHHHHHhCcccc--CccCCeEEECCC
Confidence            99999999976422  123457888765

...

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.36  E-value=6.8e-12  Score=98.61  Aligned_cols=212  Identities=17%  Similarity=0.207  Sum_probs=137.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhh---hhC-CCcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL---DAL-PHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~---~~~-~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      .+|++++||+.|-||..++++|+++|   ..+.+...+.+..+...   +.. ...+.|+++|+++..++++.++    .
T Consensus         4 tGKna~vtggagGIGl~~sk~Ll~kg---ik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    4 TGKNALVTGGAGGIGLATSKALLEKG---IKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             cCceEEEecCCchhhHHHHHHHHHcC---chheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            37899999999999999999999999   77777777665543322   222 2457789999999888777665    4


Q ss_pred             hCCCCEEEECCCccCccccccCchhhhhccccccHH---HHHhhhhhcc---CceEEEeechhhhcccCCCCcccCCCCC
Q 020880           74 FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLV---NWLSSFTENK---ENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~---~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++.+|++||.||...    +.+++..+.+|+.|.+.   ..+.+..+.+   -.-+|.+||..-..+-..          
T Consensus        81 fg~iDIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~----------  146 (261)
T KOG4169|consen   81 FGTIDILINGAGILD----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPV----------  146 (261)
T ss_pred             hCceEEEEccccccc----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcccc----------
Confidence            578999999999864    45789999999887642   4555554432   136999999876543221          


Q ss_pred             cchHHHHHHHHHHHHHHH---------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhc-CCceEeecC-----cc
Q 020880          148 VNVYGKSKVAAEKFIYEK---------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSK-GEKVEFFHD-----EC  212 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~---------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~  212 (320)
                      ...|+.||.-.-.+-|..         +.++..++|+.+--              .+...+.. +..+.....     ..
T Consensus       147 ~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t--------------~l~~~~~~~~~~~e~~~~~~~~l~~  212 (261)
T KOG4169|consen  147 FPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRT--------------DLAENIDASGGYLEYSDSIKEALER  212 (261)
T ss_pred             chhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchH--------------HHHHHHHhcCCcccccHHHHHHHHH
Confidence            447999998776655553         44555566654411              11111111 111111110     01


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ..--...+++..++.+++.+..+     .+|-+.++.
T Consensus       213 ~~~q~~~~~a~~~v~aiE~~~NG-----aiw~v~~g~  244 (261)
T KOG4169|consen  213 APKQSPACCAINIVNAIEYPKNG-----AIWKVDSGS  244 (261)
T ss_pred             cccCCHHHHHHHHHHHHhhccCC-----cEEEEecCc
Confidence            11245678888999999885433     377776653

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.35  E-value=2.1e-12  Score=97.05  Aligned_cols=204  Identities=14%  Similarity=0.136  Sum_probs=142.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ++.|++||+.--||+.+++.|.+.|   ..|++..|++.....+...-+..+..+.+|+.+-+.+.+.+-.+.-.|.++|
T Consensus         7 G~~vlvTgagaGIG~~~v~~La~aG---A~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVN   83 (245)
T KOG1207|consen    7 GVIVLVTGAGAGIGKEIVLSLAKAG---AQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVN   83 (245)
T ss_pred             ceEEEeecccccccHHHHHHHHhcC---CEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhc
Confidence            6789999999999999999999999   8999999998888777776666688899999997777776665557899999


Q ss_pred             CCCccCc----cccccCchhhhhccccccHHHHHhh----hhhccC-ceEEEeechhhhcccCCCCcccCCCCCcchHHH
Q 020880           83 CAALSVP----RVCENDPDSAMSINVPSSLVNWLSS----FTENKE-NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGK  153 (320)
Q Consensus        83 ~a~~~~~----~~~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~-~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~  153 (320)
                      +||....    ...+++.+..+++|+.+.+ ++.+.    +...++ ..+|.+||.+...+          ...++.|..
T Consensus        84 NAgvA~~~pf~eiT~q~fDr~F~VNvravi-~v~Q~var~lv~R~~~GaIVNvSSqas~R~----------~~nHtvYca  152 (245)
T KOG1207|consen   84 NAGVATNHPFGEITQQSFDRTFAVNVRAVI-LVAQLVARNLVDRQIKGAIVNVSSQASIRP----------LDNHTVYCA  152 (245)
T ss_pred             cchhhhcchHHHHhHHhhcceeeeeeeeee-eHHHHHHHhhhhccCCceEEEecchhcccc----------cCCceEEee
Confidence            9997643    2334566788899998875 55554    333333 36999999886542          234778999


Q ss_pred             HHHHHHHHHHHH----cC---CeeEEeecccccCCCCCCCCC-CChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHH
Q 020880          154 SKVAAEKFIYEK----CS---NFAILRSSIIYGPQTISPVPK-SLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII  225 (320)
Q Consensus       154 sK~~~e~~~~~~----~~---~~~ilR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  225 (320)
                      +|.+.+.+.+..    +.   +.-.+.|..|+-.-....... .....++     ..-|+.       -|..++.+++++
T Consensus       153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL-----~riPl~-------rFaEV~eVVnA~  220 (245)
T KOG1207|consen  153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKML-----DRIPLK-------RFAEVDEVVNAV  220 (245)
T ss_pred             cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchh-----hhCchh-------hhhHHHHHHhhh
Confidence            999998866543    33   334577777754321111110 0000111     111221       378899999999


Q ss_pred             HHHHhhh
Q 020880          226 LALTNRW  232 (320)
Q Consensus       226 ~~~~~~~  232 (320)
                      ..++...
T Consensus       221 lfLLSd~  227 (245)
T KOG1207|consen  221 LFLLSDN  227 (245)
T ss_pred             eeeeecC
Confidence            8887653

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.31  E-value=1.5e-10  Score=99.03  Aligned_cols=219  Identities=15%  Similarity=0.061  Sum_probs=124.4

Q ss_pred             CcEEEEEcCC--ChhhHHHHHHHhhccCCCceEEEecCCC---------CChhh--hhh-hCCC-----cceEEEeeCCC
Q 020880            3 KKRVLVVGGT--GYLGQHLLQGLSEIEGKPYDVAATHHST---------PLPQL--LLD-ALPH-----SFVFFDVDLKS   63 (320)
Q Consensus         3 ~~~ilItGat--G~IG~~l~~~L~~~g~~v~~v~~~~r~~---------~~~~~--~~~-~~~~-----~~~~~~~Dl~d   63 (320)
                      +|+++||||+  .-||.++++.|.++|   ++|+...+.+         +....  ... ..+.     .+..+.+|+.+
T Consensus         8 gk~alITGa~~~~GIG~a~A~~la~~G---a~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          8 GKIAFIAGIGDDQGYGWGIAKALAEAG---ATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCEEEEeCCCCCCCHHHHHHHHHHHCC---CEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            6899999995  899999999999999   8888765431         11000  000 0000     01112344444


Q ss_pred             cc------------------cHHH----HHHHhCCCCEEEECCCccC---c---cccccCchhhhhccccccHHHHHhhh
Q 020880           64 GS------------------GFDA----VALKFGQPDVVVNCAALSV---P---RVCENDPDSAMSINVPSSLVNWLSSF  115 (320)
Q Consensus        64 ~~------------------~~~~----~~~~~~~~d~Vih~a~~~~---~---~~~~~~~~~~~~~n~~~~~~~~l~~~  115 (320)
                      ++                  ++++    +.+.++++|++||+||...   .   ..+.++++..+++|+.+.+ ++.+++
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~-~l~~a~  163 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFV-SLLSHF  163 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHH-HHHHHH
Confidence            43                  2333    3445678999999998532   1   1223455778899999986 666655


Q ss_pred             hhc--cCceEEEeechhhhcccCCCCcccCCCCCc-chHHHHHHHHHHHHHHHc--------CCeeEEeecccccCCCCC
Q 020880          116 TEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPV-NVYGKSKVAAEKFIYEKC--------SNFAILRSSIIYGPQTIS  184 (320)
Q Consensus       116 ~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~-~~Y~~sK~~~e~~~~~~~--------~~~~ilR~~~v~G~~~~~  184 (320)
                      ...  .-.++|++||....-...          .. ..|+.+|...+.+.+.+.        .++..+.|+.+--+-...
T Consensus       164 ~p~m~~~G~ii~iss~~~~~~~p----------~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~  233 (299)
T PRK06300        164 GPIMNPGGSTISLTYLASMRAVP----------GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKA  233 (299)
T ss_pred             HHHhhcCCeEEEEeehhhcCcCC----------CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhc
Confidence            431  113799998866532211          12 279999999998776542        234568887764332100


Q ss_pred             CCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      .   ......... .....++       ..+...+|+++++.+++.....  ...+.++.+.++
T Consensus       234 ~---~~~~~~~~~-~~~~~p~-------~r~~~peevA~~v~~L~s~~~~--~itG~~i~vdGG  284 (299)
T PRK06300        234 I---GFIERMVDY-YQDWAPL-------PEPMEAEQVGAAAAFLVSPLAS--AITGETLYVDHG  284 (299)
T ss_pred             c---cccHHHHHH-HHhcCCC-------CCCcCHHHHHHHHHHHhCcccc--CCCCCEEEECCC
Confidence            0   000111111 1111111       1246789999999998865321  122447777655

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.26  E-value=5.2e-11  Score=125.07  Aligned_cols=164  Identities=14%  Similarity=0.069  Sum_probs=119.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh---------------------------------------
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP---------------------------------------   43 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~---------------------------------------   43 (320)
                      ++.+|||||+|-||..++++|.+++.  .+|++++|+....                                       
T Consensus      1997 g~vvLVTGGarGIG~aiA~~LA~~~g--a~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813      1997 DDVFLVTGGAKGVTFECALELAKQCQ--AHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhcC--CEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence            57999999999999999999998832  7888888872100                                       


Q ss_pred             -----h---hh---hhhCCCcceEEEeeCCCcccHHHHHHHh---CCCCEEEECCCccCcc----ccccCchhhhhcccc
Q 020880           44 -----Q---LL---LDALPHSFVFFDVDLKSGSGFDAVALKF---GQPDVVVNCAALSVPR----VCENDPDSAMSINVP  105 (320)
Q Consensus        44 -----~---~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~  105 (320)
                           .   ..   ....+..+.++.+|++|.+++.++++.+   +++|.|||+||.....    ...+++...+++|+.
T Consensus      2075 ~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813      2075 PVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred             ccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence                 0   00   1122446778999999999988877654   3689999999975432    223456778999999


Q ss_pred             ccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHHc-----CCeeEEeeccccc
Q 020880          106 SSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-----SNFAILRSSIIYG  179 (320)
Q Consensus       106 ~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~-----~~~~ilR~~~v~G  179 (320)
                      |.+ ++++++.....++||++||...+-...          ....|+.+|...+.+.+.+.     .++..+.||.+-|
T Consensus      2155 G~~-~Ll~al~~~~~~~IV~~SSvag~~G~~----------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813      2155 GLL-SLLAALNAENIKLLALFSSAAGFYGNT----------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred             HHH-HHHHHHHHhCCCeEEEEechhhcCCCC----------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecC
Confidence            986 999999877777899999987643221          25689999998887666543     2445677766644

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.25  E-value=2.1e-10  Score=94.86  Aligned_cols=201  Identities=17%  Similarity=0.173  Sum_probs=134.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC-----CcceEEEeeCCCcccHHHHHHHh----
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-----HSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      .+|+||||+.-||..++.++..+|   .+|+.+.|+..+..+....+.     ..+.+..+|+.|.+++..+++..    
T Consensus        34 ~hi~itggS~glgl~la~e~~~~g---a~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~  110 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREG---ADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE  110 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHcc---CceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence            489999999999999999999999   789999999877666555442     22568889999999998888876    


Q ss_pred             CCCCEEEECCCccCccccccC----chhhhhccccccHHHHHhhhhh----cc-CceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVPRVCEND----PDSAMSINVPSSLVNWLSSFTE----NK-ENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~----~~~~~~~n~~~~~~~~l~~~~~----~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      .-+|.+|||||...+...+..    .+..+++|..+++ +.+.++..    .. ..+|+.+||....-          +.
T Consensus       111 ~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~-~v~~~~~~~mk~~~~~g~I~~vsS~~a~~----------~i  179 (331)
T KOG1210|consen  111 GPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTV-NVAKAAARAMKKREHLGRIILVSSQLAML----------GI  179 (331)
T ss_pred             CCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhH-HHHHHHHHHhhccccCcEEEEehhhhhhc----------Cc
Confidence            478999999999876544332    2466789999996 76666542    11 22888888865421          13


Q ss_pred             CCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      ...+.|+.+|...--+.....       ..++..-|+.+--|+-.    +.       +..  .......-.+.-+.+-.
T Consensus       180 ~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE----~E-------n~t--kP~~t~ii~g~ss~~~~  246 (331)
T KOG1210|consen  180 YGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFE----RE-------NKT--KPEETKIIEGGSSVIKC  246 (331)
T ss_pred             ccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccc----cc-------ccc--CchheeeecCCCCCcCH
Confidence            346788888887766554433       23344444444443210    00       000  00111111233455889


Q ss_pred             HHHHHHHHHHHhh
Q 020880          219 RDVVKIILALTNR  231 (320)
Q Consensus       219 ~D~a~~~~~~~~~  231 (320)
                      +++|++++.-+.+
T Consensus       247 e~~a~~~~~~~~r  259 (331)
T KOG1210|consen  247 EEMAKAIVKGMKR  259 (331)
T ss_pred             HHHHHHHHhHHhh
Confidence            9999999888876

>PRK06720 hypothetical protein; Provisional

Probab=99.22  E-value=1.4e-10  Score=90.67  Aligned_cols=84  Identities=20%  Similarity=0.214  Sum_probs=65.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHH----HhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVAL----KFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----~~~   75 (320)
                      ++.++||||+|.||..+++.|.++|   ++|...+|+.+......+.   .+....++.+|+++.+++.++++    .++
T Consensus        16 gk~~lVTGa~~GIG~aia~~l~~~G---~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G   92 (169)
T PRK06720         16 GKVAIVTGGGIGIGRNTALLLAKQG---AKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFS   92 (169)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999999   8999888886544332222   23446678999999988777553    456


Q ss_pred             CCCEEEECCCccCc
Q 020880           76 QPDVVVNCAALSVP   89 (320)
Q Consensus        76 ~~d~Vih~a~~~~~   89 (320)
                      ++|++||+||....
T Consensus        93 ~iDilVnnAG~~~~  106 (169)
T PRK06720         93 RIDMLFQNAGLYKI  106 (169)
T ss_pred             CCCEEEECCCcCCC
Confidence            89999999997653

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.17  E-value=1.3e-10  Score=91.29  Aligned_cols=104  Identities=18%  Similarity=0.188  Sum_probs=78.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC--CCcceEEEeeCCCcccHHHHHHHh----CCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFDVDLKSGSGFDAVALKF----GQP   77 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~----~~~   77 (320)
                      |+++|||||||+|. +++.|.++|   ++|.+..|+++....+....  ...+.++.+|+.|++++.++++..    +.+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G---~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i   76 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKG---FHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPF   76 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCc---CEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999886 999999999   89998899866555444322  245777889999999988777643    567


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc----eEEEeechh
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN----LLIHLSTDQ  130 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~----~~v~~Ss~~  130 (320)
                      |.+|+.+=                  +.++ .++..+|++.+++    +++|+=++.
T Consensus        77 d~lv~~vh------------------~~~~-~~~~~~~~~~gv~~~~~~~~h~~gs~  114 (177)
T PRK08309         77 DLAVAWIH------------------SSAK-DALSVVCRELDGSSETYRLFHVLGSA  114 (177)
T ss_pred             eEEEEecc------------------ccch-hhHHHHHHHHccCCCCceEEEEeCCc
Confidence            77776542                  2233 4899999999998    899985443

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.14  E-value=3.5e-10  Score=96.98  Aligned_cols=171  Identities=14%  Similarity=0.115  Sum_probs=114.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh--hhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ--LLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      +|+||.|+|++|.||+.++..|..++.. .++.++++......  .+.....   .....+.+|+.++.+.++   ++|+
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~-~elvL~Di~~~~g~a~Dl~~~~~---~~~v~~~td~~~~~~~l~---gaDv   79 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHV-SELSLYDIVGAPGVAADLSHIDT---PAKVTGYADGELWEKALR---GADL   79 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCC-CEEEEEecCCCcccccchhhcCc---CceEEEecCCCchHHHhC---CCCE
Confidence            4789999999999999999999866643 67888888322221  1111111   234556777665445555   9999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC---CCcccCCCCCcchHHHHHH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS---FYKEEDEIAPVNVYGKSKV  156 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~---~~~E~~~~~p~~~Y~~sK~  156 (320)
                      ||++||....+  ..++...+..|+..+ .++++++++++.+++|+++|.-+-.-...   .+.+.+...|...||.+-+
T Consensus        80 VVitaG~~~~~--~~tR~dll~~N~~i~-~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~L  156 (321)
T PTZ00325         80 VLICAGVPRKP--GMTRDDLFNTNAPIV-RDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTL  156 (321)
T ss_pred             EEECCCCCCCC--CCCHHHHHHHHHHHH-HHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhH
Confidence            99999974322  245678899999888 49999999999999999999655432111   1234455666777777644


Q ss_pred             HHHHH----HHHHcCCeeEEeecccccCCCC
Q 020880          157 AAEKF----IYEKCSNFAILRSSIIYGPQTI  183 (320)
Q Consensus       157 ~~e~~----~~~~~~~~~ilR~~~v~G~~~~  183 (320)
                      ..-|+    .+.++.+...++ +.|+|.+.+
T Consensus       157 Ds~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        157 DVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             HHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            44443    233455555566 788887753

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.14  E-value=2.2e-10  Score=94.80  Aligned_cols=165  Identities=15%  Similarity=0.215  Sum_probs=111.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----CCcceEEEeeCCCccc-HHHHHHHhC--C
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDLKSGSG-FDAVALKFG--Q   76 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~-~~~~~~~~~--~   76 (320)
                      .=..|||||.-||...+++|.++|   ++|++..|++++.....++.    +-.+.++.+|.++++. ++.+.+.+.  +
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG---~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~  126 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRG---FNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD  126 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence            347899999999999999999999   99999999999887666544    3346678899998875 333333333  5


Q ss_pred             CCEEEECCCccC--ccccccCc----hhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           77 PDVVVNCAALSV--PRVCENDP----DSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        77 ~d~Vih~a~~~~--~~~~~~~~----~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +-++|||+|...  |....+.+    +....+|+.++.   +-++..+.+.+..-+|++||.+.--+          ..-
T Consensus       127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p----------~p~  196 (312)
T KOG1014|consen  127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIP----------TPL  196 (312)
T ss_pred             eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccccc----------Chh
Confidence            667999999875  32211222    456678887753   13444444555558999999875332          223


Q ss_pred             cchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCC
Q 020880          148 VNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQ  181 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~  181 (320)
                      .+.|+.+|...+.+-+.+.       ..+-.+-|..|-.+-
T Consensus       197 ~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm  237 (312)
T KOG1014|consen  197 LSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM  237 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence            6789999998887554432       233446666665543

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.13  E-value=3.1e-10  Score=85.30  Aligned_cols=213  Identities=20%  Similarity=0.237  Sum_probs=139.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCCCE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPDV   79 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~d~   79 (320)
                      -..+||||..-+|...++.|..+|   ..|..++-..++.....+.+++++.|..+|++++++++.++.    ++++.|.
T Consensus        10 lvalvtggasglg~ataerlakqg---asv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen   10 LVALVTGGASGLGKATAERLAKQG---ASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             eeEEeecCcccccHHHHHHHHhcC---ceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            367999999999999999999999   788889988888888888888899999999999998887764    5678999


Q ss_pred             EEECCCccCc----------cccccCchhhhhccccccHHHHHhhhhh---------ccC-ceEEEeechhhhcccCCCC
Q 020880           80 VVNCAALSVP----------RVCENDPDSAMSINVPSSLVNWLSSFTE---------NKE-NLLIHLSTDQVYEGVKSFY  139 (320)
Q Consensus        80 Vih~a~~~~~----------~~~~~~~~~~~~~n~~~~~~~~l~~~~~---------~~~-~~~v~~Ss~~vy~~~~~~~  139 (320)
                      .+||||....          ....++.+...++|+.|++ |+++.-..         .|. .-+|.+.|.+.|....+  
T Consensus        87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtf-nvirl~aglmg~nepdq~gqrgviintasvaafdgq~g--  163 (260)
T KOG1199|consen   87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTF-NVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG--  163 (260)
T ss_pred             eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeee-eeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc--
Confidence            9999997532          1122455677889999997 77665431         121 14777777777765433  


Q ss_pred             cccCCCCCcchHHHHHHHHHH----HHHHHc---CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcc
Q 020880          140 KEEDEIAPVNVYGKSKVAAEK----FIYEKC---SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       140 ~E~~~~~p~~~Y~~sK~~~e~----~~~~~~---~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                              ...|+.||...--    +.+++.   .++..+-|+.+=-|-     -.+++ .-+...+.+.-+++-     
T Consensus       164 --------qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpl-----lsslp-ekv~~fla~~ipfps-----  224 (260)
T KOG1199|consen  164 --------QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPL-----LSSLP-EKVKSFLAQLIPFPS-----  224 (260)
T ss_pred             --------hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChh-----hhhhh-HHHHHHHHHhCCCch-----
Confidence                    6689999876654    334432   244445454431111     11111 112222222223322     


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEec
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVG  246 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~  246 (320)
                       ..-|...-+..+-.+++++.-+++    ++-+.
T Consensus       225 -rlg~p~eyahlvqaiienp~lnge----vir~d  253 (260)
T KOG1199|consen  225 -RLGHPHEYAHLVQAIIENPYLNGE----VIRFD  253 (260)
T ss_pred             -hcCChHHHHHHHHHHHhCcccCCe----EEEec
Confidence             124566667777777787654433    55554

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=99.08  E-value=5.6e-10  Score=96.96  Aligned_cols=99  Identities=18%  Similarity=0.192  Sum_probs=82.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||+|+|.|| |+||+.++..|.++|.  .+|++.+|+.++..+.......+++..+.|+.|.+.+.++++   +.|+|||
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d--~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~---~~d~VIn   74 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGD--GEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIK---DFDLVIN   74 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCC--ceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHh---cCCEEEE
Confidence            689999997 9999999999999987  799999999988888877655688999999999999999998   7799999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEee
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS  127 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~S  127 (320)
                      ++.....                   .+++++|.+.|+ .+|=+|
T Consensus        75 ~~p~~~~-------------------~~i~ka~i~~gv-~yvDts   99 (389)
T COG1748          75 AAPPFVD-------------------LTILKACIKTGV-DYVDTS   99 (389)
T ss_pred             eCCchhh-------------------HHHHHHHHHhCC-CEEEcc
Confidence            9865421                   267777777776 444444

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.03  E-value=5.1e-09  Score=83.80  Aligned_cols=162  Identities=15%  Similarity=0.149  Sum_probs=113.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCC--CceEEEecCCCCChhhhhhhC----C---CcceEEEeeCCCcccHHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGK--PYDVAATHHSTPLPQLLLDAL----P---HSFVFFDVDLKSGSGFDAVA   71 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~--v~~v~~~~r~~~~~~~~~~~~----~---~~~~~~~~Dl~d~~~~~~~~   71 (320)
                      |+.|.++|||++.-||-++|.+|++..++  +..+...+|+-++++....++    +   ..++++..|+++-.++..+.
T Consensus         1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~   80 (341)
T KOG1478|consen    1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRAS   80 (341)
T ss_pred             CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHH
Confidence            77899999999999999999999987654  267889999988876554433    2   35778999999988765544


Q ss_pred             ----HHhCCCCEEEECCCccCccc-------------------------------cccCchhhhhccccccHHHHHh---
Q 020880           72 ----LKFGQPDVVVNCAALSVPRV-------------------------------CENDPDSAMSINVPSSLVNWLS---  113 (320)
Q Consensus        72 ----~~~~~~d~Vih~a~~~~~~~-------------------------------~~~~~~~~~~~n~~~~~~~~l~---  113 (320)
                          +++.+.|.|+-+||....+.                               +..+-..+++.||.|.+ -++.   
T Consensus        81 ~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhf-yli~~l~  159 (341)
T KOG1478|consen   81 KDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHF-YLIRELE  159 (341)
T ss_pred             HHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchh-hhHhhhh
Confidence                45568999999999764321                               01123567899999975 4433   


Q ss_pred             -hhhhccCceEEEeechhhhcccCCCCcccC-CCCCcchHHHHHHHHHHHHHHH
Q 020880          114 -SFTENKENLLIHLSTDQVYEGVKSFYKEED-EIAPVNVYGKSKVAAEKFIYEK  165 (320)
Q Consensus       114 -~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~-~~~p~~~Y~~sK~~~e~~~~~~  165 (320)
                       ......-.++|.+||...-  .+..--||- -.....+|..||+..+.+-...
T Consensus       160 pll~~~~~~~lvwtSS~~a~--kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~  211 (341)
T KOG1478|consen  160 PLLCHSDNPQLVWTSSRMAR--KKNLSLEDFQHSKGKEPYSSSKRLTDLLHVAL  211 (341)
T ss_pred             hHhhcCCCCeEEEEeecccc--cccCCHHHHhhhcCCCCcchhHHHHHHHHHHH
Confidence             3334444489999997642  111112222 2345668999999999865544

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.93  E-value=1.8e-09  Score=85.13  Aligned_cols=163  Identities=13%  Similarity=0.095  Sum_probs=108.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~d   78 (320)
                      .+.+||||++.-||.-++..+.+.+.+ .-+.+..|.....+.+....+....+..+|++....+.+..+    +.++-|
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed~e-~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~   84 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAEDDE-ALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRD   84 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcchH-HHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCcee
Confidence            578999999999999999999998855 445555555444333333333344445567666554444332    224689


Q ss_pred             EEEECCCccCcc-------ccccCchhhhhccccccHHHHHhhh----hhcc-CceEEEeechhhhcccCCCCcccCCCC
Q 020880           79 VVVNCAALSVPR-------VCENDPDSAMSINVPSSLVNWLSSF----TENK-ENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        79 ~Vih~a~~~~~~-------~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      .|||+||...+-       .....+..+++.|+...+ .+...+    ++.. .+.+|++||.+.-.          |..
T Consensus        85 iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~V-sL~~~~l~~lk~~p~~~~vVnvSS~aav~----------p~~  153 (253)
T KOG1204|consen   85 IIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMV-SLVQWALPKLKKSPVNGNVVNVSSLAAVR----------PFS  153 (253)
T ss_pred             EEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHH-hhHHHHHHHhcCCCccCeEEEecchhhhc----------ccc
Confidence            999999986541       122346788999998875 444433    3342 35799999987643          344


Q ss_pred             CcchHHHHHHHHHHHHHHHcC------CeeEEeeccc
Q 020880          147 PVNVYGKSKVAAEKFIYEKCS------NFAILRSSII  177 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~~------~~~ilR~~~v  177 (320)
                      .+..|+.+|++.+.+++..+.      ....++||.|
T Consensus       154 ~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvv  190 (253)
T KOG1204|consen  154 SWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVV  190 (253)
T ss_pred             HHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcc
Confidence            578999999999998887532      3456777766

>PLN00106 malate dehydrogenase

Probab=98.93  E-value=3e-09  Score=91.31  Aligned_cols=170  Identities=14%  Similarity=0.080  Sum_probs=111.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ..||.|+|++|.||+.++..|..++.. .++.+.++++..... .+...........++.+.+++.+.++   ++|+|||
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~-~el~L~Di~~~~g~a-~Dl~~~~~~~~i~~~~~~~d~~~~l~---~aDiVVi   92 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLV-SELHLYDIANTPGVA-ADVSHINTPAQVRGFLGDDQLGDALK---GADLVII   92 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCC-CEEEEEecCCCCeeE-chhhhCCcCceEEEEeCCCCHHHHcC---CCCEEEE
Confidence            468999999999999999999877643 578888887622211 11000011113345544445555565   9999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcc---cCCCCcccCCCCCcchHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG---VKSFYKEEDEIAPVNVYGKSKVAAE  159 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~---~~~~~~E~~~~~p~~~Y~~sK~~~e  159 (320)
                      +||....+  ..+....+..|..... ++.+.+++.+.+.+|+++|--+=+.   -...+...+...|...||.+++..+
T Consensus        93 tAG~~~~~--g~~R~dll~~N~~i~~-~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~  169 (323)
T PLN00106         93 PAGVPRKP--GMTRDDLFNINAGIVK-TLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVV  169 (323)
T ss_pred             eCCCCCCC--CCCHHHHHHHHHHHHH-HHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHH
Confidence            99975432  3467888999998884 9999999999888888888544210   0011234455667778888888887


Q ss_pred             HHHH----HHcCCeeEEeecccccCC
Q 020880          160 KFIY----EKCSNFAILRSSIIYGPQ  181 (320)
Q Consensus       160 ~~~~----~~~~~~~ilR~~~v~G~~  181 (320)
                      ++-.    +++.+..-+ -+.|+|.+
T Consensus       170 Rl~~~lA~~lgv~~~~V-~~~ViGeH  194 (323)
T PLN00106        170 RANTFVAEKKGLDPADV-DVPVVGGH  194 (323)
T ss_pred             HHHHHHHHHhCCChhhe-EEEEEEeC
Confidence            7444    345555555 34555665

>PRK09620 hypothetical protein; Provisional

Probab=98.89  E-value=5.3e-09  Score=85.54  Aligned_cols=83  Identities=19%  Similarity=0.146  Sum_probs=53.5

Q ss_pred             CCCcEEEEEcCC----------------ChhhHHHHHHHhhccCCCceEEEecCCCCChhh-hhhhCCCcceEEEeeCCC
Q 020880            1 MSKKRVLVVGGT----------------GYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLKS   63 (320)
Q Consensus         1 m~~~~ilItGat----------------G~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~Dl~d   63 (320)
                      |.+|+||||+|.                ||+|++|+++|+++|   ++|+.+.+....... ...  ...+..+..+...
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~G---a~V~li~g~~~~~~~~~~~--~~~~~~V~s~~d~   75 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKG---AHVIYLHGYFAEKPNDINN--QLELHPFEGIIDL   75 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCC---CeEEEEeCCCcCCCcccCC--ceeEEEEecHHHH
Confidence            578999999885                999999999999999   788776654221110 000  1112234552222


Q ss_pred             cccHHHHHHHhCCCCEEEECCCccCc
Q 020880           64 GSGFDAVALKFGQPDVVVNCAALSVP   89 (320)
Q Consensus        64 ~~~~~~~~~~~~~~d~Vih~a~~~~~   89 (320)
                      .+.+.+++... ++|+|||+||....
T Consensus        76 ~~~l~~~~~~~-~~D~VIH~AAvsD~  100 (229)
T PRK09620         76 QDKMKSIITHE-KVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHHHHHhccc-CCCEEEECccccce
Confidence            23455555422 79999999998654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.79  E-value=1.4e-08  Score=90.67  Aligned_cols=96  Identities=20%  Similarity=0.265  Sum_probs=71.7

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhh-CCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDA-LPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|.|| |++|+.+++.|.+.+.  + +|++.+|+.++.+.+.+. ...++.+++.|+.|.+++.++++   ++|+||||
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~--~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~---~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGP--FEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLR---GCDVVINC   74 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTC--E-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHT---TSSEEEE-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCC--CCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHh---cCCEEEEC
Confidence            799999 9999999999998874  4 899999998887777765 45689999999999999988887   88999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEee
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS  127 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~S  127 (320)
                      ++....                   ..++++|.+.|+ ++|=+|
T Consensus        75 ~gp~~~-------------------~~v~~~~i~~g~-~yvD~~   98 (386)
T PF03435_consen   75 AGPFFG-------------------EPVARACIEAGV-HYVDTS   98 (386)
T ss_dssp             SSGGGH-------------------HHHHHHHHHHT--EEEESS
T ss_pred             Cccchh-------------------HHHHHHHHHhCC-Ceeccc
Confidence            986411                   266777777766 555543

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.70  E-value=6.6e-08  Score=83.64  Aligned_cols=172  Identities=13%  Similarity=0.082  Sum_probs=96.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCC----CceEEEecCCCCC--hhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGK----PYDVAATHHSTPL--PQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~----v~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      .||+||||+|+||++++..|+..+..    ..+++++++++..  .......+.+.......|+....++.+.++   ++
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~---~a   79 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFK---DV   79 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhC---CC
Confidence            47999999999999999999885521    0479999886532  111100000000011224433444445555   99


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-Cc-eEEEeechhhhcccCCCCcccCCCCC-----cch
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-EN-LLIHLSTDQVYEGVKSFYKEEDEIAP-----VNV  150 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy~~~~~~~~E~~~~~p-----~~~  150 (320)
                      |+|||+||.....  ..+....++.|+.-. ..+.....+.. .. .+|.+|...=.-  .....+.++.-|     ...
T Consensus        80 DiVI~tAG~~~~~--~~~R~~l~~~N~~i~-~~i~~~i~~~~~~~~iiivvsNPvD~~--t~~~~k~~~~~~~~~ig~gt  154 (325)
T cd01336          80 DVAILVGAMPRKE--GMERKDLLKANVKIF-KEQGEALDKYAKKNVKVLVVGNPANTN--ALILLKYAPSIPKENFTALT  154 (325)
T ss_pred             CEEEEeCCcCCCC--CCCHHHHHHHHHHHH-HHHHHHHHHhCCCCeEEEEecCcHHHH--HHHHHHHcCCCCHHHEEeee
Confidence            9999999986432  345688889998754 36666666552 22 466666521000  000111111111     112


Q ss_pred             HHHHHHHHHHHHHHHcCCeeEEeecccccCCCC
Q 020880          151 YGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI  183 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~~~~~~ilR~~~v~G~~~~  183 (320)
                      +--+.+....+.++++.+...++-..|+|.+..
T Consensus       155 ~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~  187 (325)
T cd01336         155 RLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS  187 (325)
T ss_pred             hHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC
Confidence            445555566666777776666776777787653

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.61  E-value=7.4e-08  Score=81.01  Aligned_cols=78  Identities=22%  Similarity=0.330  Sum_probs=65.0

Q ss_pred             EEEEEcCCChhhHHHHHHHhh----ccCCCceEEEecCCCCChhhhhhhCC-------CcceEEEeeCCCcccHHHHHHH
Q 020880            5 RVLVVGGTGYLGQHLLQGLSE----IEGKPYDVAATHHSTPLPQLLLDALP-------HSFVFFDVDLKSGSGFDAVALK   73 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~----~g~~v~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dl~d~~~~~~~~~~   73 (320)
                      -++|.|||||.|.+++++++.    .|   ...-...|++.+..+.++...       .....+.+|..|++++.+.++ 
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~---~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak-   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEG---LSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK-   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccC---ceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh-
Confidence            489999999999999999998    56   778889999888776665431       122378899999999999998 


Q ss_pred             hCCCCEEEECCCccC
Q 020880           74 FGQPDVVVNCAALSV   88 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~   88 (320)
                        ++.+|+||+|+..
T Consensus        83 --~~~vivN~vGPyR   95 (423)
T KOG2733|consen   83 --QARVIVNCVGPYR   95 (423)
T ss_pred             --hhEEEEeccccce
Confidence              8999999999864

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.55  E-value=2.6e-07  Score=76.82  Aligned_cols=94  Identities=14%  Similarity=0.108  Sum_probs=70.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|||+||||. |+.|++.|.+.|   ++|++..+++.....+...   ....+..+..|.+++.+++... ++|+||++
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g---~~v~~s~~t~~~~~~~~~~---g~~~v~~g~l~~~~l~~~l~~~-~i~~VIDA   72 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQG---IEILVTVTTSEGKHLYPIH---QALTVHTGALDPQELREFLKRH-SIDILVDA   72 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCC---CeEEEEEccCCcccccccc---CCceEEECCCCHHHHHHHHHhc-CCCEEEEc
Confidence            57999999999 999999999999   8899999987654433321   1223566777888888888763 89999998


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCc
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN  121 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~  121 (320)
                      +.++..             .+.   .++.++|++.+++
T Consensus        73 tHPfA~-------------~is---~~a~~a~~~~~ip   94 (256)
T TIGR00715        73 THPFAA-------------QIT---TNATAVCKELGIP   94 (256)
T ss_pred             CCHHHH-------------HHH---HHHHHHHHHhCCc
Confidence            754311             111   4889999999984

This enzyme was found to be a monomer by gel filtration.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.48  E-value=3.1e-07  Score=79.10  Aligned_cols=72  Identities=25%  Similarity=0.245  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      ++++|+||||+|+||+.++++|.++ |.  .+++...|+..+...+...+.      .+++.+   +.+++.   ++|+|
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv--~~lilv~R~~~rl~~La~el~------~~~i~~---l~~~l~---~aDiV  219 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGV--AELLLVARQQERLQELQAELG------GGKILS---LEEALP---EADIV  219 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCC--CEEEEEcCCHHHHHHHHHHhc------cccHHh---HHHHHc---cCCEE
Confidence            4689999999999999999999865 42  588888888666655544321      233332   445554   89999


Q ss_pred             EECCCcc
Q 020880           81 VNCAALS   87 (320)
Q Consensus        81 ih~a~~~   87 (320)
                      ||+++..
T Consensus       220 v~~ts~~  226 (340)
T PRK14982        220 VWVASMP  226 (340)
T ss_pred             EECCcCC
Confidence            9999864

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.47  E-value=5e-07  Score=72.65  Aligned_cols=79  Identities=24%  Similarity=0.172  Sum_probs=61.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC--CcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--HSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      ..++++|+||||.+|+.+++.|.+.|   .+|+...|+.++...+.+.+.  ........|..+.+++.+.+.   ++|+
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g---~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~di  100 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREG---ARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK---GADV  100 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh---cCCE
Confidence            35799999999999999999999999   789999998766655544332  123455678888777777776   8999


Q ss_pred             EEECCCc
Q 020880           80 VVNCAAL   86 (320)
Q Consensus        80 Vih~a~~   86 (320)
                      ||++.+.
T Consensus       101 Vi~at~~  107 (194)
T cd01078         101 VFAAGAA  107 (194)
T ss_pred             EEECCCC
Confidence            9997653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.47  E-value=4e-07  Score=74.84  Aligned_cols=69  Identities=14%  Similarity=0.209  Sum_probs=44.7

Q ss_pred             CCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccH-HHHHHHhCCCCEEEECCCccC
Q 020880           11 GTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGF-DAVALKFGQPDVVVNCAALSV   88 (320)
Q Consensus        11 atG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~-~~~~~~~~~~d~Vih~a~~~~   88 (320)
                      +|||||++|+++|+++|   ++|+++.|+..... .   ...++.++.++-  .+.+ ..+.+.+.++|+|||+||...
T Consensus        24 SSG~iG~aLA~~L~~~G---~~V~li~r~~~~~~-~---~~~~v~~i~v~s--~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         24 STGQLGKIIAETFLAAG---HEVTLVTTKTAVKP-E---PHPNLSIIEIEN--VDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             cchHHHHHHHHHHHhCC---CEEEEEECcccccC-C---CCCCeEEEEEec--HHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            48999999999999999   88988887643211 0   013455555432  2222 222233348999999999864

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.47  E-value=1.2e-05  Score=64.02  Aligned_cols=219  Identities=19%  Similarity=0.159  Sum_probs=123.3

Q ss_pred             CCCcEEEEEcCC--ChhhHHHHHHHhhccCCCceEEEecCCCCCh---hhhhhhCCCcceEEEeeCCCcccHHHHHHHh-
Q 020880            1 MSKKRVLVVGGT--GYLGQHLLQGLSEIEGKPYDVAATHHSTPLP---QLLLDALPHSFVFFDVDLKSGSGFDAVALKF-   74 (320)
Q Consensus         1 m~~~~ilItGat--G~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   74 (320)
                      |.+|++||+|-.  --|+..+++.|.++|   .++..+...+.-.   +++.+.++ ....+.||+++.+++..++..+ 
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~G---AeL~fTy~~e~l~krv~~la~~~~-s~~v~~cDV~~d~~i~~~f~~i~   79 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQG---AELAFTYQGERLEKRVEELAEELG-SDLVLPCDVTNDESIDALFATIK   79 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcC---CEEEEEeccHHHHHHHHHHHhhcc-CCeEEecCCCCHHHHHHHHHHHH
Confidence            468999999965  579999999999999   7887777765322   22333332 2345899999999988888644 


Q ss_pred             ---CCCCEEEECCCccCccc--------cccCchhhhhccccccHHHHHhhhhh---ccCceEEEe---echhhhcccCC
Q 020880           75 ---GQPDVVVNCAALSVPRV--------CENDPDSAMSINVPSSLVNWLSSFTE---NKENLLIHL---STDQVYEGVKS  137 (320)
Q Consensus        75 ---~~~d~Vih~a~~~~~~~--------~~~~~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~---Ss~~vy~~~~~  137 (320)
                         +..|.++|+.+...-..        +.+.....+++....- ..++++++.   .|- .+|-+   +|..+.     
T Consensus        80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~-~~lak~a~~lM~~gg-SiltLtYlgs~r~v-----  152 (259)
T COG0623          80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSF-TALAKAARPLMNNGG-SILTLTYLGSERVV-----  152 (259)
T ss_pred             HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhH-HHHHHHHHHhcCCCC-cEEEEEeccceeec-----
Confidence               68999999998764211        1111122222222222 244444442   121 33333   322221     


Q ss_pred             CCcccCCCCCcchHHHHHHHHHHHHHHH----cCCeeEEeeccc-ccCCCCCCC-CCCChHHHHHHHHhcCCceEeecCc
Q 020880          138 FYKEEDEIAPVNVYGKSKVAAEKFIYEK----CSNFAILRSSII-YGPQTISPV-PKSLPIQWIDSVLSKGEKVEFFHDE  211 (320)
Q Consensus       138 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v-~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  211 (320)
                             + -.+.-+..|...|.-++-.    +.+  -+|...| -||-..... .-..+..++ .......|+      
T Consensus       153 -------P-nYNvMGvAKAaLEasvRyLA~dlG~~--gIRVNaISAGPIrTLAasgI~~f~~~l-~~~e~~aPl------  215 (259)
T COG0623         153 -------P-NYNVMGVAKAALEASVRYLAADLGKE--GIRVNAISAGPIRTLAASGIGDFRKML-KENEANAPL------  215 (259)
T ss_pred             -------C-CCchhHHHHHHHHHHHHHHHHHhCcc--CeEEeeecccchHHHHhhccccHHHHH-HHHHhhCCc------
Confidence                   1 1457789999999866654    333  2333222 233221000 000011111 112222233      


Q ss_pred             ccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          212 CRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       212 ~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                       +.-+..+||++.-..++....++-.  +++.++.+|-.
T Consensus       216 -~r~vt~eeVG~tA~fLlSdLssgiT--Gei~yVD~G~~  251 (259)
T COG0623         216 -RRNVTIEEVGNTAAFLLSDLSSGIT--GEIIYVDSGYH  251 (259)
T ss_pred             -cCCCCHHHhhhhHHHHhcchhcccc--cceEEEcCCce
Confidence             2357799999998888877655432  56888887754

>PRK05086 malate dehydrogenase; Provisional

Probab=98.42  E-value=2e-06  Score=74.10  Aligned_cols=116  Identities=19%  Similarity=0.170  Sum_probs=75.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhh-ccCCCceEEEecCCCCChhhhhhhCC-CcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSE-IEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~-~g~~v~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      |||+|.||||.||++++..|.. .+.. +++.+..|++.......+... +....+.+  .+.+++.+.+.   ++|+||
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~-~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~---~~DiVI   74 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAG-SELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALE---GADVVL   74 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCc-cEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcC---CCCEEE
Confidence            6899999999999999988854 3322 677777776432100011001 11112333  22233333444   899999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      .++|..+.+  ..+....+..|.... .++++++.+.+.+++|.+.|
T Consensus        75 itaG~~~~~--~~~R~dll~~N~~i~-~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         75 ISAGVARKP--GMDRSDLFNVNAGIV-KNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHH-HHHHHHHHHhCCCeEEEEcc
Confidence            999975432  235677888888877 49999999998888887776

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.41  E-value=9.6e-07  Score=78.30  Aligned_cols=78  Identities=26%  Similarity=0.380  Sum_probs=60.5

Q ss_pred             CCCcEEEEEcC----------------CChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCc
Q 020880            1 MSKKRVLVVGG----------------TGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG   64 (320)
Q Consensus         1 m~~~~ilItGa----------------tG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~   64 (320)
                      |.+|+|+||||                +|.+|.+++++|..+|   .+|+.+.++.+..      .+..  ....|+++.
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~G---a~V~~v~~~~~~~------~~~~--~~~~dv~~~  254 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRG---ADVTLVSGPVNLP------TPAG--VKRIDVESA  254 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCC---CEEEEeCCCcccc------CCCC--cEEEccCCH
Confidence            45789999999                9999999999999999   8898888765311      1112  246799998


Q ss_pred             ccHHHHHH-HhCCCCEEEECCCccCc
Q 020880           65 SGFDAVAL-KFGQPDVVVNCAALSVP   89 (320)
Q Consensus        65 ~~~~~~~~-~~~~~d~Vih~a~~~~~   89 (320)
                      +++.+.+. .++++|++||+||....
T Consensus       255 ~~~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        255 QEMLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             HHHHHHHHHhcCCCCEEEEccccccc
Confidence            88776664 35679999999998643

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.38  E-value=1.9e-06  Score=75.01  Aligned_cols=81  Identities=22%  Similarity=0.143  Sum_probs=60.4

Q ss_pred             CcEEEEEcCCChhhHH--HHHHHhhccCCCceEEEecCCCCC---------------hhhhhhhCCCcceEEEeeCCCcc
Q 020880            3 KKRVLVVGGTGYLGQH--LLQGLSEIEGKPYDVAATHHSTPL---------------PQLLLDALPHSFVFFDVDLKSGS   65 (320)
Q Consensus         3 ~~~ilItGatG~IG~~--l~~~L~~~g~~v~~v~~~~r~~~~---------------~~~~~~~~~~~~~~~~~Dl~d~~   65 (320)
                      .|++|||||++-||.+  +++.| +.|   .+|+++.+..++               .....+..+.....+.+|+++++
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~G---A~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAG---ADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcC---CeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence            5899999999999999  89999 999   777777743211               12222233334566899999999


Q ss_pred             cHHHHHHH----hCCCCEEEECCCcc
Q 020880           66 GFDAVALK----FGQPDVVVNCAALS   87 (320)
Q Consensus        66 ~~~~~~~~----~~~~d~Vih~a~~~   87 (320)
                      ++.++++.    ++++|++||++|..
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccC
Confidence            87776654    46899999999975

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.27  E-value=1.4e-06  Score=72.88  Aligned_cols=77  Identities=22%  Similarity=0.282  Sum_probs=64.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      ..++|-|||||.|..++++|..+|   .+-.+..|+..+...+...++....  ..++.+++.+++.++   +.++|+||
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g---~~~aLAgRs~~kl~~l~~~LG~~~~--~~p~~~p~~~~~~~~---~~~VVlnc   78 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREG---LTAALAGRSSAKLDALRASLGPEAA--VFPLGVPAALEAMAS---RTQVVLNC   78 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcC---CchhhccCCHHHHHHHHHhcCcccc--ccCCCCHHHHHHHHh---cceEEEec
Confidence            368999999999999999999999   6678899999888888887766554  344555888888887   89999999


Q ss_pred             CCccC
Q 020880           84 AALSV   88 (320)
Q Consensus        84 a~~~~   88 (320)
                      +|+..
T Consensus        79 vGPyt   83 (382)
T COG3268          79 VGPYT   83 (382)
T ss_pred             ccccc
Confidence            99874

>cd00704 MDH Malate dehydrogenase

Probab=98.25  E-value=6.9e-06  Score=71.03  Aligned_cols=107  Identities=13%  Similarity=0.080  Sum_probs=71.3

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCC----CceEEEecCCC--CChhhhhhhCCCcceEEEeeCCCc-----------ccH
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGK----PYDVAATHHST--PLPQLLLDALPHSFVFFDVDLKSG-----------SGF   67 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~----v~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~d~-----------~~~   67 (320)
                      ||.|+||+|.||+.++..|..+|..    .+++.+.++++  +..+           ....|+.|.           ...
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~-----------g~~~Dl~d~~~~~~~~~~i~~~~   70 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE-----------GVVMELQDCAFPLLKGVVITTDP   70 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc-----------eeeeehhhhcccccCCcEEecCh
Confidence            7999999999999999999876631    02588888875  3221           133444443           122


Q ss_pred             HHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-Cc-eEEEeec
Q 020880           68 DAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-EN-LLIHLST  128 (320)
Q Consensus        68 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~-~~v~~Ss  128 (320)
                      .+.++   ++|+|||+||....  ..++..+.+..|+.-. ..+.....+.. .. .+|.+|.
T Consensus        71 ~~~~~---~aDiVVitAG~~~~--~g~tR~dll~~N~~i~-~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          71 EEAFK---DVDVAILVGAFPRK--PGMERADLLRKNAKIF-KEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             HHHhC---CCCEEEEeCCCCCC--cCCcHHHHHHHhHHHH-HHHHHHHHHhCCCCeEEEEeCC
Confidence            23344   99999999997533  2346678888888765 47777777763 43 4555654

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.24  E-value=3.8e-06  Score=72.57  Aligned_cols=166  Identities=12%  Similarity=0.071  Sum_probs=101.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCC----CceEEEecCCCCC--hhhhhhhCCCcceEEE--eeCCCcccHHHHHHHhC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGK----PYDVAATHHSTPL--PQLLLDALPHSFVFFD--VDLKSGSGFDAVALKFG   75 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~----v~~v~~~~r~~~~--~~~~~~~~~~~~~~~~--~Dl~d~~~~~~~~~~~~   75 (320)
                      +||.|+||+|.||+.++-.|+..|..    ..++.+.+..+..  +......+.+....+.  ..++. +.. +.+.   
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~-~~~-~~~~---   77 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITD-DPN-VAFK---   77 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEec-CcH-HHhC---
Confidence            58999999999999999999887732    0168888875433  2211111111000000  01111 112 2233   


Q ss_pred             CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccC-c-eEEEeechh---hhcccCCCCcccCC-CCCcc
Q 020880           76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE-N-LLIHLSTDQ---VYEGVKSFYKEEDE-IAPVN  149 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~-~-~~v~~Ss~~---vy~~~~~~~~E~~~-~~p~~  149 (320)
                      ++|+||.+||....  ..++....+..|+.-. ..+.....+... . .+|.+|...   +|-     .-..++ ..+..
T Consensus        78 daDivvitaG~~~k--~g~tR~dll~~N~~i~-~~i~~~i~~~~~~~~iiivvsNPvD~~t~~-----~~k~sg~~p~~~  149 (322)
T cd01338          78 DADWALLVGAKPRG--PGMERADLLKANGKIF-TAQGKALNDVASRDVKVLVVGNPCNTNALI-----AMKNAPDIPPDN  149 (322)
T ss_pred             CCCEEEEeCCCCCC--CCCcHHHHHHHHHHHH-HHHHHHHHhhCCCCeEEEEecCcHHHHHHH-----HHHHcCCCChHh
Confidence            89999999997532  2345677888887765 477777766652 3 566666521   110     111222 44566


Q ss_pred             hHHHHHHHHHHHHHH----HcCCeeEEeecccccCCC
Q 020880          150 VYGKSKVAAEKFIYE----KCSNFAILRSSIIYGPQT  182 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~----~~~~~~ilR~~~v~G~~~  182 (320)
                      .||.+++..+++...    ++.+...+|...|||++.
T Consensus       150 ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         150 FTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             eEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence            888999999986654    456677799999999985

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.24  E-value=6.1e-06  Score=72.96  Aligned_cols=107  Identities=17%  Similarity=0.237  Sum_probs=72.9

Q ss_pred             CCCcEEEEEcC----------------CChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCc
Q 020880            1 MSKKRVLVVGG----------------TGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG   64 (320)
Q Consensus         1 m~~~~ilItGa----------------tG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~   64 (320)
                      |.+++|+||||                ||.+|.++++.|..+|   .+|+.+.++....      .+..+  ...|+.+.
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G---a~V~~~~g~~~~~------~~~~~--~~~~v~~~  251 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG---ADVTLITGPVSLL------TPPGV--KSIKVSTA  251 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC---CEEEEeCCCCccC------CCCCc--EEEEeccH
Confidence            35689999998                5789999999999999   8888877664321      12222  46789888


Q ss_pred             ccH-HHHHH-HhCCCCEEEECCCccCccccc---c---CchhhhhccccccHHHHHhhhhhcc
Q 020880           65 SGF-DAVAL-KFGQPDVVVNCAALSVPRVCE---N---DPDSAMSINVPSSLVNWLSSFTENK  119 (320)
Q Consensus        65 ~~~-~~~~~-~~~~~d~Vih~a~~~~~~~~~---~---~~~~~~~~n~~~~~~~~l~~~~~~~  119 (320)
                      +++ ..+++ .++++|++||+||........   .   .....+..|+..+- .++...++..
T Consensus       252 ~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~p-dil~~l~~~~  313 (390)
T TIGR00521       252 EEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNP-DIIAEVRKIK  313 (390)
T ss_pred             HHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCc-HHHHHHHhhC
Confidence            887 55653 335789999999987542111   0   00123446666664 7888877654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=98.20  E-value=2.1e-06  Score=54.59  Aligned_cols=54  Identities=19%  Similarity=0.263  Sum_probs=32.2

Q ss_pred             HHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          260 VAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       260 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      +.++.|.+.++..      .+.+..+......|++|++++|||+| ++++++++++.+|.+
T Consensus         2 ~e~vtG~~i~~~~------~~rR~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~   56 (62)
T PF13950_consen    2 FEKVTGKKIPVEY------APRRPGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQK   56 (62)
T ss_dssp             HHHHHTS---EEE------E---TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHH
T ss_pred             cHHHHCCCCCceE------CCCCCCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHH
Confidence            5667777655431      34566778889999999999999999 999999999999975

...

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.15  E-value=1.1e-05  Score=68.89  Aligned_cols=79  Identities=13%  Similarity=0.136  Sum_probs=57.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCce-EEEecCCC---CChhhhhhhCC---CcceEEEeeCCCcccHHHHHHHh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYD-VAATHHST---PLPQLLLDALP---HSFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~-v~~~~r~~---~~~~~~~~~~~---~~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      .+++++|+|| |-+|++++..|.+.|   .. |+...|+.   ++.+.+.+.+.   ........|+.+.+++.+.++  
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G---~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~--  198 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDG---AKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA--  198 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCC---CCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc--
Confidence            3578999998 899999999999999   54 88899986   44444444332   233445678887766666555  


Q ss_pred             CCCCEEEECCCcc
Q 020880           75 GQPDVVVNCAALS   87 (320)
Q Consensus        75 ~~~d~Vih~a~~~   87 (320)
                       .+|+|||+....
T Consensus       199 -~~DilINaTp~G  210 (289)
T PRK12548        199 -SSDILVNATLVG  210 (289)
T ss_pred             -cCCEEEEeCCCC
Confidence             689999987654

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=98.12  E-value=4.9e-06  Score=61.34  Aligned_cols=98  Identities=26%  Similarity=0.302  Sum_probs=59.4

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-ChhhhhhhCC--Ccce-EEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-LPQLLLDALP--HSFV-FFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-~~~~~~~~~~--~~~~-~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      ||.|.||||++|+.|++.|.+.-+  +++..+..++. ....+....+  .... ...-+ .+.+    .+.   ++|+|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~--~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~----~~~---~~Dvv   70 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPD--FELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPE----ELS---DVDVV   70 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTST--EEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGH----HHT---TESEE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCC--ccEEEeeeeccccCCeeehhccccccccceeEee-cchh----Hhh---cCCEE
Confidence            699999999999999999988433  77666555554 4433333322  1111 11112 2222    233   89999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      |.|.+...                   ...+...+.+.|+ ++|=.|+..-+
T Consensus        71 f~a~~~~~-------------------~~~~~~~~~~~g~-~ViD~s~~~R~  102 (121)
T PF01118_consen   71 FLALPHGA-------------------SKELAPKLLKAGI-KVIDLSGDFRL  102 (121)
T ss_dssp             EE-SCHHH-------------------HHHHHHHHHHTTS-EEEESSSTTTT
T ss_pred             EecCchhH-------------------HHHHHHHHhhCCc-EEEeCCHHHhC
Confidence            99865310                   0366777778887 77777776543

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=98.11  E-value=1.1e-05  Score=70.37  Aligned_cols=99  Identities=19%  Similarity=0.090  Sum_probs=64.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |++|+|.||||++|+.|++.|.+++|.+.++..+.+..+..+.+.  +. .......|+.+.     .++   ++|+||-
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~--~~-g~~i~v~d~~~~-----~~~---~vDvVf~   69 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS--FK-GKELKVEDLTTF-----DFS---GVDIALF   69 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee--eC-CceeEEeeCCHH-----HHc---CCCEEEE
Confidence            578999999999999999999998876567788877755443322  11 123334455331     223   8999998


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      +++...   +                ..++..+.+.|+ ++|=.||..-+
T Consensus        70 A~g~g~---s----------------~~~~~~~~~~G~-~VIDlS~~~R~   99 (334)
T PRK14874         70 SAGGSV---S----------------KKYAPKAAAAGA-VVIDNSSAFRM   99 (334)
T ss_pred             CCChHH---H----------------HHHHHHHHhCCC-EEEECCchhhc
Confidence            875421   0                255555556676 67777776544

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.06  E-value=9.5e-06  Score=66.65  Aligned_cols=66  Identities=12%  Similarity=0.160  Sum_probs=47.6

Q ss_pred             CCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCCCEEEECCCc
Q 020880           11 GTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPDVVVNCAAL   86 (320)
Q Consensus        11 atG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~d~Vih~a~~   86 (320)
                      +||.||.+++++|.++|   ++|+...+... ..   . .    ....+|+.+.+++.++++    .++++|++||+||.
T Consensus        23 SSGgIG~AIA~~la~~G---a~Vvlv~~~~~-l~---~-~----~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv   90 (227)
T TIGR02114        23 STGHLGKIITETFLSAG---HEVTLVTTKRA-LK---P-E----PHPNLSIREIETTKDLLITLKELVQEHDILIHSMAV   90 (227)
T ss_pred             cccHHHHHHHHHHHHCC---CEEEEEcChhh-cc---c-c----cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence            48999999999999999   88887766321 10   0 0    013578888877766543    34679999999997


Q ss_pred             cC
Q 020880           87 SV   88 (320)
Q Consensus        87 ~~   88 (320)
                      ..
T Consensus        91 ~d   92 (227)
T TIGR02114        91 SD   92 (227)
T ss_pred             cc
Confidence            54

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=98.05  E-value=1.6e-05  Score=69.09  Aligned_cols=101  Identities=20%  Similarity=0.152  Sum_probs=63.4

Q ss_pred             CC-CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            1 MS-KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         1 m~-~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |+ |++|.|+||||++|+.|++.|.+++|.+.++..+....+..+.+ . +..    ...++.+.+.. + ++   ++|+
T Consensus         1 m~~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l-~-~~~----~~l~~~~~~~~-~-~~---~vD~   69 (336)
T PRK05671          1 MSQPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSV-P-FAG----KNLRVREVDSF-D-FS---QVQL   69 (336)
T ss_pred             CCCCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCee-c-cCC----cceEEeeCChH-H-hc---CCCE
Confidence            55 47999999999999999999998876655655554433222111 1 111    23444443322 2 33   8999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      ||-++...   .+                ..++..+.+.|+ ++|=.||..-+
T Consensus        70 vFla~p~~---~s----------------~~~v~~~~~~G~-~VIDlS~~fR~  102 (336)
T PRK05671         70 AFFAAGAA---VS----------------RSFAEKARAAGC-SVIDLSGALPS  102 (336)
T ss_pred             EEEcCCHH---HH----------------HHHHHHHHHCCC-eEEECchhhcC
Confidence            99876421   00                257777777787 78888887754

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=98.03  E-value=1.8e-05  Score=69.35  Aligned_cols=103  Identities=22%  Similarity=0.239  Sum_probs=62.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEE-EeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFF-DVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      |+||+|.||||++|+.+++.|.+...  +++..+.++.+..+.+.+..+ .+..+ ..++.+.+..  ..   .++|+||
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~--~elv~v~~~~~~g~~l~~~~~-~~~~~~~~~~~~~~~~--~~---~~vD~Vf   73 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPE--VEIVAVTSRSSAGKPLSDVHP-HLRGLVDLVLEPLDPE--IL---AGADVVF   73 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCC--ceEEEEECccccCcchHHhCc-ccccccCceeecCCHH--Hh---cCCCEEE
Confidence            57999999999999999999987632  787776664433332222211 11111 1223333221  22   3799999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      -|....           ..        ..++..+.+.|+ ++|=.|+..-+.
T Consensus        74 ~alP~~-----------~~--------~~~v~~a~~aG~-~VID~S~~fR~~  105 (343)
T PRK00436         74 LALPHG-----------VS--------MDLAPQLLEAGV-KVIDLSADFRLK  105 (343)
T ss_pred             ECCCcH-----------HH--------HHHHHHHHhCCC-EEEECCcccCCC
Confidence            875321           00        266666666775 888888876553

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.01  E-value=1.6e-05  Score=60.12  Aligned_cols=113  Identities=12%  Similarity=0.066  Sum_probs=73.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      |||.|+||+|.+|++++-.|..++.. .++++.++++++.+.....+     .......... .+.+.    ++   ++|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~-~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~~~~----~~---~aD   71 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLA-DEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GDYEA----LK---DAD   71 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTS-SEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SSGGG----GT---TES
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCC-CceEEeccCcccceeeehhhhhhhhhccccccccc-ccccc----cc---ccc
Confidence            68999999999999999999988754 67999998866544333222     1111111111 33322    33   899


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      +||-+||....  ...+..+.++.|..-. ..+.+...+.+.+ .++.+|.
T Consensus        72 ivvitag~~~~--~g~sR~~ll~~N~~i~-~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   72 IVVITAGVPRK--PGMSRLDLLEANAKIV-KEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             EEEETTSTSSS--TTSSHHHHHHHHHHHH-HHHHHHHHHHSTTSEEEE-SS
T ss_pred             EEEEecccccc--ccccHHHHHHHhHhHH-HHHHHHHHHhCCccEEEEeCC
Confidence            99999997532  2345677788887766 4777777776643 4555553

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.98  E-value=5.1e-05  Score=65.70  Aligned_cols=112  Identities=16%  Similarity=0.136  Sum_probs=71.5

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCC----CceEEEecCCCCChhhhhhhCCCcceEEEeeCCCccc-H-------HHHHH
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGK----PYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG-F-------DAVAL   72 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~----v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~-------~~~~~   72 (320)
                      +|.|+||+|.||++++..|...+..    -+++++.+++++...         ..-...|+.|... +       ....+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~---------a~g~~~Dl~d~~~~~~~~~~~~~~~~~   71 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV---------LEGVVMELMDCAFPLLDGVVPTHDPAV   71 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc---------cceeEeehhcccchhcCceeccCChHH
Confidence            5899999999999999999876631    025888888644311         1113445555440 0       01122


Q ss_pred             HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-C-ceEEEeec
Q 020880           73 KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-E-NLLIHLST  128 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~-~~~v~~Ss  128 (320)
                      .+.++|+|||+||....+  ..+....+..|+.-. ..+.+...+.. . ..+|.+|.
T Consensus        72 ~~~~aDiVVitAG~~~~~--~~tr~~ll~~N~~i~-k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        72 AFTDVDVAILVGAFPRKE--GMERRDLLSKNVKIF-KEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             HhCCCCEEEEcCCCCCCC--CCcHHHHHHHHHHHH-HHHHHHHHhhCCCCeEEEEeCC
Confidence            234899999999975332  234678888888766 47777777763 3 25666665

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.97  E-value=2e-05  Score=69.63  Aligned_cols=104  Identities=18%  Similarity=0.318  Sum_probs=66.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHH-HHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAV-ALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~~d~Vi   81 (320)
                      +|||.|.||||++|+.|++.|.+..+  +++..+.+..+..+.+....+   +....|+.+.+.++.. ++   ++|+||
T Consensus        38 ~~kVaIvGATG~vG~eLlrlL~~hP~--~el~~l~s~~saG~~i~~~~~---~l~~~~~~~~~~~~~~~~~---~~DvVf  109 (381)
T PLN02968         38 KKRIFVLGASGYTGAEVRRLLANHPD--FEITVMTADRKAGQSFGSVFP---HLITQDLPNLVAVKDADFS---DVDAVF  109 (381)
T ss_pred             ccEEEEECCCChHHHHHHHHHHhCCC--CeEEEEEChhhcCCCchhhCc---cccCccccceecCCHHHhc---CCCEEE
Confidence            57999999999999999999988733  788888876544333222211   1122444433333322 33   899999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhccc
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV  135 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~  135 (320)
                      -+.+..                  .+ .+++..+ +.++ ++|-.|+..-+.+.
T Consensus       110 ~Alp~~------------------~s-~~i~~~~-~~g~-~VIDlSs~fRl~~~  142 (381)
T PLN02968        110 CCLPHG------------------TT-QEIIKAL-PKDL-KIVDLSADFRLRDI  142 (381)
T ss_pred             EcCCHH------------------HH-HHHHHHH-hCCC-EEEEcCchhccCCc
Confidence            876421                  01 3666665 3454 89999998876543

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.96  E-value=2.7e-05  Score=68.42  Aligned_cols=38  Identities=34%  Similarity=0.467  Sum_probs=31.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      |+|+||+|+||||++|+.|++.|++..+  .++.++.++.
T Consensus         1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~--~el~~~~~s~   38 (349)
T PRK08664          1 MMKLKVGILGATGMVGQRFVQLLANHPW--FEVTALAASE   38 (349)
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHcCCC--ceEEEEEcCh
Confidence            7789999999999999999999987653  6888775554

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.87  E-value=4.8e-05  Score=74.77  Aligned_cols=79  Identities=14%  Similarity=0.164  Sum_probs=59.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCC-----------CceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGK-----------PYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVA   71 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~-----------v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   71 (320)
                      |++|+|.|| |+||+..++.|.+....           +..|...+++.+.++.+.+.+ .++..+..|+.|.+++.+++
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-ENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-CCCceEEeecCCHHHHHHhh
Confidence            679999995 99999999999875420           023777777766666665544 25677899999988877776


Q ss_pred             HHhCCCCEEEECCCc
Q 020880           72 LKFGQPDVVVNCAAL   86 (320)
Q Consensus        72 ~~~~~~d~Vih~a~~   86 (320)
                      +   ++|+||.|...
T Consensus       647 ~---~~DaVIsalP~  658 (1042)
T PLN02819        647 S---QVDVVISLLPA  658 (1042)
T ss_pred             c---CCCEEEECCCc
Confidence            6   79999999754

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.76  E-value=0.00012  Score=63.21  Aligned_cols=118  Identities=12%  Similarity=0.121  Sum_probs=69.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC--CChhhhhhhCCCcceE--EEeeCCCcccHHHHHHHhCCCCE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST--PLPQLLLDALPHSFVF--FDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~--~~~~~~~~~~~~~~~~--~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |||.|+|+||++|+.++..|+..|+. .+|++++|.+  ++.......+.+....  ....+.-..+..+ +.   ++|+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~-~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~~-l~---~aDi   75 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVV-KEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLSD-VA---GSDI   75 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCC-CEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHHH-hC---CCCE
Confidence            68999999999999999999999854 4688888854  2221111110000000  0011111112222 43   8999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeech
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTD  129 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~  129 (320)
                      ||-++|....  ...+....++.|+.-.. .+++...+.... .+|..++.
T Consensus        76 Viitag~p~~--~~~~r~dl~~~n~~i~~-~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          76 VIITAGVPRK--EGMSRLDLAKKNAKIVK-KYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             EEEecCCCCC--CCCCHHHHHHHHHHHHH-HHHHHHHHHCCCeEEEEeCCc
Confidence            9999986422  22344666777776653 666666555332 67777763

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.75  E-value=0.00014  Score=66.64  Aligned_cols=74  Identities=22%  Similarity=0.186  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-ChhhhhhhC-CCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-LPQLLLDAL-PHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      +.|+|+|+|+++ +|..+++.|+++|   ++|++.++... ........+ ..++.++.+|..+     +..   +++|+
T Consensus         4 ~~k~v~iiG~g~-~G~~~A~~l~~~G---~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~---~~~d~   71 (450)
T PRK14106          4 KGKKVLVVGAGV-SGLALAKFLKKLG---AKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFL---EGVDL   71 (450)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHCC---CEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHh---hcCCE
Confidence            468999999888 9999999999999   88999888752 222222222 1245666777665     222   37999


Q ss_pred             EEECCCcc
Q 020880           80 VVNCAALS   87 (320)
Q Consensus        80 Vih~a~~~   87 (320)
                      ||++++..
T Consensus        72 vv~~~g~~   79 (450)
T PRK14106         72 VVVSPGVP   79 (450)
T ss_pred             EEECCCCC
Confidence            99998863

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.70  E-value=0.00014  Score=63.43  Aligned_cols=97  Identities=16%  Similarity=0.094  Sum_probs=61.8

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEECC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCA   84 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a   84 (320)
                      +|+|.||||++|+.|++.|.+++|.+.++..+.+..+....+.  +. .......|+..     +.+.   ++|+||-++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~--~~-~~~~~~~~~~~-----~~~~---~~D~v~~a~   69 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT--FK-GKELEVNEAKI-----ESFE---GIDIALFSA   69 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee--eC-CeeEEEEeCCh-----HHhc---CCCEEEECC
Confidence            5899999999999999999998876666666656544433222  11 13344555531     1233   899999988


Q ss_pred             CccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           85 ALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      +....                   ..++..+.+.|+ ++|=.||..-.
T Consensus        70 g~~~s-------------------~~~a~~~~~~G~-~VID~ss~~R~   97 (339)
T TIGR01296        70 GGSVS-------------------KEFAPKAAKCGA-IVIDNTSAFRM   97 (339)
T ss_pred             CHHHH-------------------HHHHHHHHHCCC-EEEECCHHHhC
Confidence            64210                   255555666676 67767776544

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.66  E-value=0.00013  Score=57.59  Aligned_cols=78  Identities=22%  Similarity=0.338  Sum_probs=47.0

Q ss_pred             CCCcEEEEEcC----------------CChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCc
Q 020880            1 MSKKRVLVVGG----------------TGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG   64 (320)
Q Consensus         1 m~~~~ilItGa----------------tG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~   64 (320)
                      |.+|+||||+|                ||-.|.+|++++..+|   ++|+.+..+.+-.      .+..+..+  ++...
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~G---a~V~li~g~~~~~------~p~~~~~i--~v~sa   69 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRG---AEVTLIHGPSSLP------PPPGVKVI--RVESA   69 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT----EEEEEE-TTS----------TTEEEE--E-SSH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCC---CEEEEEecCcccc------ccccceEE--Eecch
Confidence            46789999975                7999999999999999   7888777763211      12344433  34454


Q ss_pred             ccHHHHH-HHhCCCCEEEECCCccCc
Q 020880           65 SGFDAVA-LKFGQPDVVVNCAALSVP   89 (320)
Q Consensus        65 ~~~~~~~-~~~~~~d~Vih~a~~~~~   89 (320)
                      +++.+.+ +.+.++|++||+|+....
T Consensus        70 ~em~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   70 EEMLEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             HHHHHHHHHHGGGGSEEEE-SB--SE
T ss_pred             hhhhhhhccccCcceeEEEecchhhe
Confidence            4444433 334578999999998754

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.63  E-value=0.00012  Score=55.09  Aligned_cols=76  Identities=17%  Similarity=0.322  Sum_probs=54.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ..++++|.|+ |-+|+.++..|.+.|.  -+|+...|+.+++..+.+.++. ..+-..++.+   +.+.+.   ++|+||
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~--~~i~i~nRt~~ra~~l~~~~~~-~~~~~~~~~~---~~~~~~---~~DivI   80 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGA--KEITIVNRTPERAEALAEEFGG-VNIEAIPLED---LEEALQ---EADIVI   80 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTS--SEEEEEESSHHHHHHHHHHHTG-CSEEEEEGGG---HCHHHH---TESEEE
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHcCc-cccceeeHHH---HHHHHh---hCCeEE
Confidence            3689999995 8899999999999994  3499999998888877776521 1222333333   445565   789999


Q ss_pred             ECCCcc
Q 020880           82 NCAALS   87 (320)
Q Consensus        82 h~a~~~   87 (320)
                      ++.+..
T Consensus        81 ~aT~~~   86 (135)
T PF01488_consen   81 NATPSG   86 (135)
T ss_dssp             E-SSTT
T ss_pred             EecCCC
Confidence            998754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.63  E-value=0.00017  Score=63.22  Aligned_cols=103  Identities=21%  Similarity=0.255  Sum_probs=60.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEe-cCCCCChhhhhhhCCCcceEE-EeeCCCcccHHHHHHHhCCCCEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDALPHSFVFF-DVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      |+|.|.||||++|+.+++.|.+.-.  +++..+ .++.+..+.+.+.++ .+... ..++.+. +..++.+   ++|+||
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~--~el~~l~~s~~sagk~~~~~~~-~l~~~~~~~~~~~-~~~~~~~---~~DvVf   73 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPE--VEITYLVSSRESAGKPVSEVHP-HLRGLVDLNLEPI-DEEEIAE---DADVVF   73 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCC--ceEEEEeccchhcCCChHHhCc-cccccCCceeecC-CHHHhhc---CCCEEE
Confidence            5799999999999999999986522  677744 443322222222221 11101 1122211 2233333   799999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      -|.....                  . ..++..+.+.|+ ++|=.|+..-+.
T Consensus        74 ~alP~~~------------------s-~~~~~~~~~~G~-~VIDlS~~fR~~  105 (346)
T TIGR01850        74 LALPHGV------------------S-AELAPELLAAGV-KVIDLSADFRLK  105 (346)
T ss_pred             ECCCchH------------------H-HHHHHHHHhCCC-EEEeCChhhhcC
Confidence            8864210                  0 366777767775 899899876554

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK04148 hypothetical protein; Provisional

Probab=97.62  E-value=0.00058  Score=50.55  Aligned_cols=96  Identities=15%  Similarity=0.123  Sum_probs=70.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++|++.| +| -|.+++..|.+.|   ++|++++.++...+...+   ..+.++..|+.+++.  ++-   .++|.|+-
T Consensus        17 ~~kileIG-~G-fG~~vA~~L~~~G---~~ViaIDi~~~aV~~a~~---~~~~~v~dDlf~p~~--~~y---~~a~liys   83 (134)
T PRK04148         17 NKKIVELG-IG-FYFKVAKKLKESG---FDVIVIDINEKAVEKAKK---LGLNAFVDDLFNPNL--EIY---KNAKLIYS   83 (134)
T ss_pred             CCEEEEEE-ec-CCHHHHHHHHHCC---CEEEEEECCHHHHHHHHH---hCCeEEECcCCCCCH--HHH---hcCCEEEE
Confidence            46899999 67 8999999999999   899999999876544433   346789999999872  222   38999995


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      +    .      .|.+..        ..+++.+++-++.-+|..=|.
T Consensus        84 i----r------pp~el~--------~~~~~la~~~~~~~~i~~l~~  112 (134)
T PRK04148         84 I----R------PPRDLQ--------PFILELAKKINVPLIIKPLSG  112 (134)
T ss_pred             e----C------CCHHHH--------HHHHHHHHHcCCCEEEEcCCC
Confidence            4    1      233332        378888898888766665443

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.57  E-value=0.00041  Score=60.62  Aligned_cols=101  Identities=15%  Similarity=0.077  Sum_probs=60.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++|.|.||||++|+.|++.|.+++|.+.++..+....+..+....  . .......++. +    +.++   ++|+||-
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~--~-~~~~~v~~~~-~----~~~~---~~D~vf~   75 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF--E-GRDYTVEELT-E----DSFD---GVDIALF   75 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee--c-CceeEEEeCC-H----HHHc---CCCEEEE
Confidence            5799999999999999999999888654555444333222111111  1 1222222332 1    1233   8999998


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcc
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG  134 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~  134 (320)
                      +++...   +                ..++..+.+.|+ ++|=.|+..-+.+
T Consensus        76 a~p~~~---s----------------~~~~~~~~~~g~-~VIDlS~~fR~~~  107 (344)
T PLN02383         76 SAGGSI---S----------------KKFGPIAVDKGA-VVVDNSSAFRMEE  107 (344)
T ss_pred             CCCcHH---H----------------HHHHHHHHhCCC-EEEECCchhhcCC
Confidence            775320   0                256666666676 7888888765543

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.55  E-value=0.00026  Score=60.37  Aligned_cols=106  Identities=21%  Similarity=0.230  Sum_probs=61.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      +|+||.|.||+||.|..|++.|...-+  .++.....+..+.+.+.+.+++-...+...+...+ .+.+..  .+||+||
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~--ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~-~~~~~~--~~~DvvF   75 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPD--VELILISSRERAGKPVSDVHPNLRGLVDLPFQTID-PEKIEL--DECDVVF   75 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCC--eEEEEeechhhcCCchHHhCcccccccccccccCC-hhhhhc--ccCCEEE
Confidence            368999999999999999999987765  67665555543333333333321111112222111 112212  3799999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      -+.-..   .+                ..++..+.+.++ ++|=+|+..-.
T Consensus        76 lalPhg---~s----------------~~~v~~l~~~g~-~VIDLSadfR~  106 (349)
T COG0002          76 LALPHG---VS----------------AELVPELLEAGC-KVIDLSADFRL  106 (349)
T ss_pred             EecCch---hH----------------HHHHHHHHhCCC-eEEECCccccc
Confidence            874311   01                256666666676 58888875433

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.46  E-value=0.00043  Score=58.14  Aligned_cols=68  Identities=18%  Similarity=0.277  Sum_probs=44.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-ChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-LPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      |+||.|+|++|.+|+.+++.+.+...  +++.+...... .....          -..++...+++.++++   ++|+||
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~--~elvav~d~~~~~~~~~----------~~~~i~~~~dl~~ll~---~~DvVi   65 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAED--LELVAAVDRPGSPLVGQ----------GALGVAITDDLEAVLA---DADVLI   65 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCC--CEEEEEEecCCcccccc----------CCCCccccCCHHHhcc---CCCEEE
Confidence            47899999999999999998876422  77776554432 22111          1122333345666665   789999


Q ss_pred             ECCC
Q 020880           82 NCAA   85 (320)
Q Consensus        82 h~a~   85 (320)
                      +++.
T Consensus        66 d~t~   69 (257)
T PRK00048         66 DFTT   69 (257)
T ss_pred             ECCC
Confidence            8874

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.45  E-value=0.0059  Score=46.17  Aligned_cols=142  Identities=21%  Similarity=0.178  Sum_probs=76.1

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCC--cccHHHHHH----Hh
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS--GSGFDAVAL----KF   74 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~----~~   74 (320)
                      |+..||+|.||-|-+|++.++.+.+++   |-|.-.+-.+....        ... +..|.++  .|+-..+.+    .+
T Consensus         1 msagrVivYGGkGALGSacv~~Fkann---ywV~siDl~eNe~A--------d~s-I~V~~~~swtEQe~~v~~~vg~sL   68 (236)
T KOG4022|consen    1 MSAGRVIVYGGKGALGSACVEFFKANN---YWVLSIDLSENEQA--------DSS-ILVDGNKSWTEQEQSVLEQVGSSL   68 (236)
T ss_pred             CCCceEEEEcCcchHhHHHHHHHHhcC---eEEEEEeecccccc--------cce-EEecCCcchhHHHHHHHHHHHHhh
Confidence            666799999999999999999999999   66654444322110        111 3333332  222122222    12


Q ss_pred             --CCCCEEEECCCccCccccc-----cCchhhhhccccccHHHHHhhhhhc--cCceEEEe-echhhhcccCCCCcccCC
Q 020880           75 --GQPDVVVNCAALSVPRVCE-----NDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHL-STDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        75 --~~~d~Vih~a~~~~~~~~~-----~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~-Ss~~vy~~~~~~~~E~~~  144 (320)
                        ++.|.||..||-.......     .+.+..++..+...  .+...+...  ...-++.+ +.....++.+        
T Consensus        69 ~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtS--aIsa~lAt~HLK~GGLL~LtGAkaAl~gTP--------  138 (236)
T KOG4022|consen   69 QGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTS--AISAKLATTHLKPGGLLQLTGAKAALGGTP--------  138 (236)
T ss_pred             cccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHH--HHHHHHHHhccCCCceeeecccccccCCCC--------
Confidence              3799999998864332111     12233333333221  111111111  11123333 3333343332        


Q ss_pred             CCCcchHHHHHHHHHHHHHHHc
Q 020880          145 IAPVNVYGKSKVAAEKFIYEKC  166 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~~  166 (320)
                        ..-.|+..|.+..++.+.++
T Consensus       139 --gMIGYGMAKaAVHqLt~SLa  158 (236)
T KOG4022|consen  139 --GMIGYGMAKAAVHQLTSSLA  158 (236)
T ss_pred             --cccchhHHHHHHHHHHHHhc
Confidence              25579999999999998874

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.44  E-value=0.00095  Score=57.81  Aligned_cols=116  Identities=12%  Similarity=-0.015  Sum_probs=69.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCc-----eEEEecCCC--CChhhhhhhCCCcceEEEee--CCCcccHHHHHHHh
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPY-----DVAATHHST--PLPQLLLDALPHSFVFFDVD--LKSGSGFDAVALKF   74 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~-----~v~~~~r~~--~~~~~~~~~~~~~~~~~~~D--l~d~~~~~~~~~~~   74 (320)
                      .||.|+||+|.||++++-.|+.++.. -     ++.+.+.++  +++......+.+.......+  ++ .+.. +.++  
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~-~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~~~~-~~~~--   78 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELF-GKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-TDPE-EAFK--   78 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcc-cCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-cChH-HHhC--
Confidence            48999999999999999999888732 2     688888754  22322221111110000001  11 1112 2233  


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccC-c-eEEEeec
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE-N-LLIHLST  128 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~-~-~~v~~Ss  128 (320)
                       ++|+||.+||...-  ..++..+.+..|+.-. ..+.+.+.+... . .+|.+|.
T Consensus        79 -daDvVVitAG~~~k--~g~tR~dll~~Na~i~-~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        79 -DVDAALLVGAFPRK--PGMERADLLSKNGKIF-KEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             -CCCEEEEeCCCCCC--CCCcHHHHHHHHHHHH-HHHHHHHHhhCCCCeEEEEeCC
Confidence             89999999997432  2346778888888765 477777777654 3 4555554

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.43  E-value=0.00078  Score=57.88  Aligned_cols=116  Identities=18%  Similarity=0.095  Sum_probs=71.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCC---cceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH---SFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |||.|+|++|.||++++-.|..++.. .++.+.+.+  ++......+..   ... +.+ ....+++-+.++   ++|+|
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~-~elvLiDi~--~a~g~alDL~~~~~~~~-i~~-~~~~~~~y~~~~---daDiv   72 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLV-SELALYDIV--NTPGVAADLSHINTPAK-VTG-YLGPEELKKALK---GADVV   72 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCC-cEEEEEecC--ccceeehHhHhCCCcce-EEE-ecCCCchHHhcC---CCCEE
Confidence            58999999999999999999888753 567777766  22111111111   111 111 101111222343   89999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeechh
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTDQ  130 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~~  130 (320)
                      |-+||....  ..++....++.|..-. ..+.+...+.+.+ .+|.+|...
T Consensus        73 vitaG~~~k--~g~tR~dll~~N~~i~-~~i~~~i~~~~p~a~vivvtNPv  120 (310)
T cd01337          73 VIPAGVPRK--PGMTRDDLFNINAGIV-RDLATAVAKACPKALILIISNPV  120 (310)
T ss_pred             EEeCCCCCC--CCCCHHHHHHHHHHHH-HHHHHHHHHhCCCeEEEEccCch
Confidence            999997432  2345678888888766 3777777776543 666667654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.40  E-value=0.00056  Score=59.09  Aligned_cols=110  Identities=11%  Similarity=0.111  Sum_probs=72.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC-------CcceEEEeeCCCcccHHHHHHHhCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-------HSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      +||.|.|+ |.+|+.++..|+..|.. .++.+.+|++++.+.+...+.       .... +..  .+   ..+ +.   +
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~-~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~-i~~--~~---~~~-l~---~   68 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIA-DELVLIDINEEKAEGEALDLEDALAFLPSPVK-IKA--GD---YSD-CK---D   68 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCC-CEEEEEeCCcchhhHhHhhHHHHhhccCCCeE-EEc--CC---HHH-hC---C
Confidence            47999995 99999999999998853 479999998777655544331       1111 111  12   222 33   8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      +|+||+++|....  ...+....++.|..-. ..+.+..++.+.+ .+|.+|.
T Consensus        69 aDIVIitag~~~~--~g~~R~dll~~N~~i~-~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          69 ADIVVITAGAPQK--PGETRLDLLEKNAKIM-KSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             CCEEEEccCCCCC--CCCCHHHHHHHHHHHH-HHHHHHHHHhCCCeEEEEecC
Confidence            9999999987432  2345667788887665 3777777776543 5666665

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.36  E-value=0.00049  Score=53.04  Aligned_cols=75  Identities=13%  Similarity=0.285  Sum_probs=50.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ..++|+|+|+ |.+|..+++.|.+.|.  .+|....|+.+....+.+.+...  .+..+..+   ..+.++   ++|+||
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~--~~v~v~~r~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~---~~Dvvi   86 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGA--AKIVIVNRTLEKAKALAERFGEL--GIAIAYLD---LEELLA---EADLII   86 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEcCCHHHHHHHHHHHhhc--ccceeecc---hhhccc---cCCEEE
Confidence            3579999996 9999999999998852  67888888876665554443211  01223333   223333   899999


Q ss_pred             ECCCcc
Q 020880           82 NCAALS   87 (320)
Q Consensus        82 h~a~~~   87 (320)
                      .+....
T Consensus        87 ~~~~~~   92 (155)
T cd01065          87 NTTPVG   92 (155)
T ss_pred             eCcCCC
Confidence            998654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=97.33  E-value=0.00083  Score=58.33  Aligned_cols=102  Identities=18%  Similarity=0.100  Sum_probs=61.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ++++|.|.||||++|..|++.|.++.|.+.++..+....+..+.+.  +... . +...  +.+.  ..+.   ++|+||
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~--~~~~-~-~~v~--~~~~--~~~~---~~Dvvf   71 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR--FGGK-S-VTVQ--DAAE--FDWS---QAQLAF   71 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE--ECCc-c-eEEE--eCch--hhcc---CCCEEE
Confidence            4679999999999999999999887665577766654433322211  1110 1 1111  1111  0123   789999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcc
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG  134 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~  134 (320)
                      -+++..   .+                ..++..+.+.|+ ++|=.|+..-+.+
T Consensus        72 ~a~p~~---~s----------------~~~~~~~~~~g~-~VIDlS~~fRl~~  104 (336)
T PRK08040         72 FVAGRE---AS----------------AAYAEEATNAGC-LVIDSSGLFALEP  104 (336)
T ss_pred             ECCCHH---HH----------------HHHHHHHHHCCC-EEEECChHhcCCC
Confidence            877431   00                366666666777 7888888775543

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.29  E-value=0.00042  Score=63.51  Aligned_cols=73  Identities=19%  Similarity=0.216  Sum_probs=56.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHH-HHHhCCCCEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAV-ALKFGQPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~~d~Vih   82 (320)
                      |+|+|.|+ |.+|+++++.|.+.|   ++|+++.++++..+.+.+.  ..+.++.+|.++.+.+.++ ++   ++|.||-
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g---~~v~vid~~~~~~~~~~~~--~~~~~~~gd~~~~~~l~~~~~~---~a~~vi~   71 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGEN---NDVTVIDTDEERLRRLQDR--LDVRTVVGNGSSPDVLREAGAE---DADLLIA   71 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC---CcEEEEECCHHHHHHHHhh--cCEEEEEeCCCCHHHHHHcCCC---cCCEEEE
Confidence            57999996 999999999999999   7888888887665554332  2467788999988776665 33   7899887


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +..
T Consensus        72 ~~~   74 (453)
T PRK09496         72 VTD   74 (453)
T ss_pred             ecC
Confidence            653

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.28  E-value=0.0016  Score=48.09  Aligned_cols=94  Identities=16%  Similarity=0.252  Sum_probs=52.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhh-ccCCCceEEEecCCCC-Chh--hhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSE-IEGKPYDVAATHHSTP-LPQ--LLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~-~g~~v~~v~~~~r~~~-~~~--~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |||.|.|++|-+|+.+++.+.+ .+   +++.+...+.. ...  ...+..+  ..  ...+.-.++++++++   .+|+
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~---~~lv~~v~~~~~~~~g~d~g~~~~--~~--~~~~~v~~~l~~~~~---~~DV   70 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPG---FELVGAVDRKPSAKVGKDVGELAG--IG--PLGVPVTDDLEELLE---EADV   70 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTT---EEEEEEEETTTSTTTTSBCHHHCT--SS--T-SSBEBS-HHHHTT---H-SE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCC---cEEEEEEecCCcccccchhhhhhC--cC--CcccccchhHHHhcc---cCCE
Confidence            5899999999999999999998 56   78665554433 111  0000000  00  001111234566666   5899


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEee
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS  127 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~S  127 (320)
                      ||.+..          |+..         ...++.|.++++ ++|.-+
T Consensus        71 vIDfT~----------p~~~---------~~~~~~~~~~g~-~~ViGT   98 (124)
T PF01113_consen   71 VIDFTN----------PDAV---------YDNLEYALKHGV-PLVIGT   98 (124)
T ss_dssp             EEEES-----------HHHH---------HHHHHHHHHHT--EEEEE-
T ss_pred             EEEcCC----------hHHh---------HHHHHHHHhCCC-CEEEEC
Confidence            998752          2221         367777778876 444433

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.28  E-value=0.00047  Score=56.60  Aligned_cols=75  Identities=16%  Similarity=0.248  Sum_probs=58.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+++|.| .|-+|+.+++.|.++|   ++|++..++++...+.... ......+.+|-+|++.++++=-  .++|+++-+
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g---~~Vv~Id~d~~~~~~~~~~-~~~~~~v~gd~t~~~~L~~agi--~~aD~vva~   73 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEG---HNVVLIDRDEERVEEFLAD-ELDTHVVIGDATDEDVLEEAGI--DDADAVVAA   73 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCC---CceEEEEcCHHHHHHHhhh-hcceEEEEecCCCHHHHHhcCC--CcCCEEEEe
Confidence            5788998 6999999999999999   8899999998776653331 1346778999999988777621  388999966


Q ss_pred             CC
Q 020880           84 AA   85 (320)
Q Consensus        84 a~   85 (320)
                      .+
T Consensus        74 t~   75 (225)
T COG0569          74 TG   75 (225)
T ss_pred             eC
Confidence            54

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.26  E-value=0.0014  Score=57.01  Aligned_cols=99  Identities=20%  Similarity=0.255  Sum_probs=65.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh-C--CCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF-G--QPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~--~~d~   79 (320)
                      ..+|||+||+|-+|+..++.+...|   +.+++...++++.. +...++..   ...|..+.+ +.+...+. +  ++|+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G---~~~v~~~~s~~k~~-~~~~lGAd---~vi~y~~~~-~~~~v~~~t~g~gvDv  214 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALG---ATVVAVVSSSEKLE-LLKELGAD---HVINYREED-FVEQVRELTGGKGVDV  214 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcC---CcEEEEecCHHHHH-HHHhcCCC---EEEcCCccc-HHHHHHHHcCCCCceE
Confidence            4689999999999999999999999   67777777766665 44444322   233444444 43333322 2  5999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      |+.+.|...                   +...+..++..|  +++.++...
T Consensus       215 v~D~vG~~~-------------------~~~~l~~l~~~G--~lv~ig~~~  244 (326)
T COG0604         215 VLDTVGGDT-------------------FAASLAALAPGG--RLVSIGALS  244 (326)
T ss_pred             EEECCCHHH-------------------HHHHHHHhccCC--EEEEEecCC
Confidence            999876321                   124566666665  788887665

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.24  E-value=0.00081  Score=57.25  Aligned_cols=74  Identities=15%  Similarity=0.240  Sum_probs=50.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +++++|+|+ |-+|+.++..|...|.  .+|+...|+.++.+.+.+.+..... +..++    ...+.+.   ++|+||+
T Consensus       123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~--~~V~v~~R~~~~a~~l~~~~~~~~~-~~~~~----~~~~~~~---~~DivIn  191 (278)
T PRK00258        123 GKRILILGA-GGAARAVILPLLDLGV--AEITIVNRTVERAEELAKLFGALGK-AELDL----ELQEELA---DFDLIIN  191 (278)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEEeCCHHHHHHHHHHhhhccc-eeecc----cchhccc---cCCEEEE
Confidence            578999995 9999999999999884  4799999998777666655432110 11111    1122233   7899999


Q ss_pred             CCCcc
Q 020880           83 CAALS   87 (320)
Q Consensus        83 ~a~~~   87 (320)
                      +....
T Consensus       192 aTp~g  196 (278)
T PRK00258        192 ATSAG  196 (278)
T ss_pred             CCcCC
Confidence            98654

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.24  E-value=0.0017  Score=56.74  Aligned_cols=106  Identities=16%  Similarity=0.131  Sum_probs=64.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC---------------------CChh---hhhhhCCCc--ce
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST---------------------PLPQ---LLLDALPHS--FV   55 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~---------------------~~~~---~~~~~~~~~--~~   55 (320)
                      +.++|+|.|+ |-+|+++++.|...|.  -++...+++.                     .++.   +.+....+.  ++
T Consensus        23 ~~~~VlIiG~-GglGs~va~~La~aGv--g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         23 REKHVLIVGA-GALGAANAEALVRAGI--GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            3578999995 7799999999999994  2566666652                     1111   111122223  33


Q ss_pred             EEEeeCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           56 FFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        56 ~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      .+..|++ .+.+.++++   ++|+||.+...         ++.-         ..+-+.|.+.++ ++|+.+....+|
T Consensus       100 ~~~~~~~-~~~~~~~~~---~~DlVid~~D~---------~~~r---------~~in~~~~~~~i-p~i~~~~~g~~G  154 (338)
T PRK12475        100 PVVTDVT-VEELEELVK---EVDLIIDATDN---------FDTR---------LLINDLSQKYNI-PWIYGGCVGSYG  154 (338)
T ss_pred             EEeccCC-HHHHHHHhc---CCCEEEEcCCC---------HHHH---------HHHHHHHHHcCC-CEEEEEecccEE
Confidence            4455664 344555555   89999988531         1111         144566677777 788888766665

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.23  E-value=0.0017  Score=56.22  Aligned_cols=116  Identities=13%  Similarity=0.122  Sum_probs=73.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEE-EeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFF-DVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+||.|+|+ |.||+.++-.|+..|.. .++.+.+++++.+......+.....+. ...+.. ..+++ ++   ++|+||
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~-~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~-~~~~~-~~---~adivI   78 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVNQGIA-DELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA-GDYSD-CK---DADLVV   78 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCC-CEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe-CCHHH-hC---CCCEEE
Confidence            469999997 99999999999988842 378999988776544333221110000 011111 12322 33   899999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      -+||...-  ...+....+..|..-. ..+++.+++.+.+ .+|.+|.
T Consensus        79 itag~~~k--~g~~R~dll~~N~~i~-~~i~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         79 ITAGAPQK--PGETRLDLVEKNLKIF-KSIVGEVMASGFDGIFLVASN  123 (315)
T ss_pred             EecCCCCC--CCCCHHHHHHHHHHHH-HHHHHHHHHhCCCeEEEEccC
Confidence            99987432  2345677788887665 3777777776543 5555554

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.19  E-value=0.0012  Score=55.96  Aligned_cols=73  Identities=14%  Similarity=0.267  Sum_probs=49.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++++|+|+ |-+|+.++..|.+.|   ++|+...|+.++.+.+.+.+...-.....++.      +..  ..++|+||+
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g---~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~------~~~--~~~~DivIn  184 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKAD---CNVIIANRTVSKAEELAERFQRYGEIQAFSMD------ELP--LHRVDLIIN  184 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHhhcCceEEechh------hhc--ccCccEEEE
Confidence            578999997 899999999999999   78888899877666655543211001111111      111  137899999


Q ss_pred             CCCcc
Q 020880           83 CAALS   87 (320)
Q Consensus        83 ~a~~~   87 (320)
                      +.+..
T Consensus       185 atp~g  189 (270)
T TIGR00507       185 ATSAG  189 (270)
T ss_pred             CCCCC
Confidence            98764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.19  E-value=0.0017  Score=56.78  Aligned_cols=106  Identities=14%  Similarity=0.141  Sum_probs=65.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC---------------------CChh---hhhhhCCCc--ce
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST---------------------PLPQ---LLLDALPHS--FV   55 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~---------------------~~~~---~~~~~~~~~--~~   55 (320)
                      ...+|+|.|+ |.+|+++++.|...|.  -++...+++.                     .+..   .....+.+.  ++
T Consensus        23 ~~~~VlVvG~-GglGs~va~~La~aGv--g~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         23 REKHVLIIGA-GALGTANAEMLVRAGV--GKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            3578999995 9999999999999994  3666666642                     1111   111122223  33


Q ss_pred             EEEeeCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           56 FFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        56 ~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      .+..+++. +.+.++++   ++|+||.+..         +++..         ..+-++|.+.++ ++|+.|+...||
T Consensus       100 ~~~~~~~~-~~~~~~~~---~~DlVid~~D---------n~~~r---------~~ln~~~~~~~i-P~i~~~~~g~~G  154 (339)
T PRK07688        100 AIVQDVTA-EELEELVT---GVDLIIDATD---------NFETR---------FIVNDAAQKYGI-PWIYGACVGSYG  154 (339)
T ss_pred             EEeccCCH-HHHHHHHc---CCCEEEEcCC---------CHHHH---------HHHHHHHHHhCC-CEEEEeeeeeee
Confidence            34445543 33445554   7899998853         11111         256677777776 789988877666

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=97.19  E-value=0.0018  Score=55.51  Aligned_cols=85  Identities=15%  Similarity=0.184  Sum_probs=55.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |.+|.|.||||++|..|++.|.+..+  .++.....+..+                 ++.+   ....+.   ++|+||-
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~--~~l~~~~s~~~~-----------------~~~~---~~~~~~---~~DvvFl   56 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSD--IELLSIPEAKRK-----------------DAAA---RRELLN---AADVAIL   56 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCC--eEEEEEecCCCC-----------------cccC---chhhhc---CCCEEEE
Confidence            57899999999999999998887764  677776655322                 1111   112333   7899997


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      +....   .+                ..++..+.+.|+ ++|=.|+..-.
T Consensus        57 alp~~---~s----------------~~~~~~~~~~g~-~VIDlSadfRl   86 (313)
T PRK11863         57 CLPDD---AA----------------REAVALIDNPAT-RVIDASTAHRT   86 (313)
T ss_pred             CCCHH---HH----------------HHHHHHHHhCCC-EEEECChhhhc
Confidence            75321   00                256666666676 78888886543

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.16  E-value=0.0027  Score=53.55  Aligned_cols=100  Identities=19%  Similarity=0.139  Sum_probs=72.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCC-CcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK-SGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ++++.|+|+.| +|+--++.-.+-|   ++|++.++++.+.+...+.++.  . ...|.+ |++.++++.+.   .|.++
T Consensus       182 G~~vgI~GlGG-LGh~aVq~AKAMG---~rV~vis~~~~kkeea~~~LGA--d-~fv~~~~d~d~~~~~~~~---~dg~~  251 (360)
T KOG0023|consen  182 GKWVGIVGLGG-LGHMAVQYAKAMG---MRVTVISTSSKKKEEAIKSLGA--D-VFVDSTEDPDIMKAIMKT---TDGGI  251 (360)
T ss_pred             CcEEEEecCcc-cchHHHHHHHHhC---cEEEEEeCCchhHHHHHHhcCc--c-eeEEecCCHHHHHHHHHh---hcCcc
Confidence            68999999999 9999999999999   9999999998777777776643  2 234445 77777777764   46666


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      |++......                .+..++..++..|  ++|+++-..
T Consensus       252 ~~v~~~a~~----------------~~~~~~~~lk~~G--t~V~vg~p~  282 (360)
T KOG0023|consen  252 DTVSNLAEH----------------ALEPLLGLLKVNG--TLVLVGLPE  282 (360)
T ss_pred             eeeeecccc----------------chHHHHHHhhcCC--EEEEEeCcC
Confidence            665422110                0136777778777  899988554

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.15  E-value=0.0017  Score=59.53  Aligned_cols=75  Identities=21%  Similarity=0.317  Sum_probs=58.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +++|+|.|+ |.+|+.+++.|.+.|   ++|++..++++....+.+.. ..+.++.+|.++++.+.++--  .++|.||-
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~---~~v~vid~~~~~~~~~~~~~-~~~~~i~gd~~~~~~L~~~~~--~~a~~vi~  303 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEG---YSVKLIERDPERAEELAEEL-PNTLVLHGDGTDQELLEEEGI--DEADAFIA  303 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCHHHHHHHHHHC-CCCeEEECCCCCHHHHHhcCC--ccCCEEEE
Confidence            678999996 999999999999999   88999988877665554432 346678999999887655332  37899885


Q ss_pred             CC
Q 020880           83 CA   84 (320)
Q Consensus        83 ~a   84 (320)
                      +.
T Consensus       304 ~~  305 (453)
T PRK09496        304 LT  305 (453)
T ss_pred             CC
Confidence            54

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.15  E-value=0.0017  Score=55.46  Aligned_cols=101  Identities=22%  Similarity=0.161  Sum_probs=55.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCce-EEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYD-VAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      |++|.|.||||.+|+.+++.|.++... ++ +..+....+...+       ...+....+.-++...+... +.++|+||
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~-~~~~~~~AS~rSaG~~-------~~~f~~~~~~v~~~~~~~~~-~~~~Divf   71 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFP-FEELVLLASARSAGKK-------YIEFGGKSIGVPEDAADEFV-FSDVDIVF   71 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCC-cceEEEEecccccCCc-------cccccCccccCccccccccc-cccCCEEE
Confidence            578999999999999999999997644 33 2222222111111       12222211222222111111 12799999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      .++|...   +                ..+...+.+.|+ -+|=-||++-+
T Consensus        72 ~~ag~~~---s----------------~~~~p~~~~~G~-~VIdnsSa~Rm  102 (334)
T COG0136          72 FAAGGSV---S----------------KEVEPKAAEAGC-VVIDNSSAFRM  102 (334)
T ss_pred             EeCchHH---H----------------HHHHHHHHHcCC-EEEeCCccccc
Confidence            9987421   0                377788888885 44444444444

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.12  E-value=0.0024  Score=54.45  Aligned_cols=116  Identities=14%  Similarity=0.134  Sum_probs=71.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEE--EeeCCCcccHHHHHHHhCCCCEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFF--DVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      +||.|+|+ |.||+.++-.|+.++.. -++.+.+..+++++.....+.....+.  ...+.....+. .++   +.|+|+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~-~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~-~~~---~aDiVv   74 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLG-SELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYE-DLK---GADIVV   74 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhccccc-ceEEEEEcccccccchhcchhhcchhccCceEEecCCChh-hhc---CCCEEE
Confidence            58999999 99999999999877743 378888888555443322221111111  11111111122 233   899999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      -.||...-+  -....+.++.|..-. ..+.+...+.+.+ .++.+|.
T Consensus        75 itAG~prKp--GmtR~DLl~~Na~I~-~~i~~~i~~~~~d~ivlVvtN  119 (313)
T COG0039          75 ITAGVPRKP--GMTRLDLLEKNAKIV-KDIAKAIAKYAPDAIVLVVTN  119 (313)
T ss_pred             EeCCCCCCC--CCCHHHHHHhhHHHH-HHHHHHHHhhCCCeEEEEecC
Confidence            999865322  245678888887765 3777777776654 4444444

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.12  E-value=0.0015  Score=55.60  Aligned_cols=75  Identities=20%  Similarity=0.224  Sum_probs=49.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++|+|.| +|-.|++++..|...|.  -+|+...|+.++.+.+.+.+.........  ...+.+.+.+.   ++|+||+
T Consensus       127 ~k~vlIlG-aGGaaraia~aL~~~G~--~~I~I~nR~~~ka~~la~~l~~~~~~~~~--~~~~~~~~~~~---~aDiVIn  198 (284)
T PRK12549        127 LERVVQLG-AGGAGAAVAHALLTLGV--ERLTIFDVDPARAAALADELNARFPAARA--TAGSDLAAALA---AADGLVH  198 (284)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHcCC--CEEEEECCCHHHHHHHHHHHHhhCCCeEE--EeccchHhhhC---CCCEEEE
Confidence            47899999 57799999999999993  37999999988777766544211110111  11122223333   7999999


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +..
T Consensus       199 aTp  201 (284)
T PRK12549        199 ATP  201 (284)
T ss_pred             CCc
Confidence            943

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.12  E-value=0.0039  Score=53.75  Aligned_cols=116  Identities=16%  Similarity=0.163  Sum_probs=70.0

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhh--hhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL--LLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||.|+|++|.||++++-.|..++.. .++.+.++++.....  +... ..... +.+ ..+.+++.+.++   ++|+||-
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~-~elvL~Di~~a~g~a~DL~~~-~~~~~-i~~-~~~~~~~~~~~~---daDivvi   73 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYV-SELSLYDIAGAAGVAADLSHI-PTAAS-VKG-FSGEEGLENALK---GADVVVI   73 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCC-cEEEEecCCCCcEEEchhhcC-CcCce-EEE-ecCCCchHHHcC---CCCEEEE
Confidence            6899999999999999999888743 478888876522111  1110 01111 111 001111223344   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeechh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTDQ  130 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~~  130 (320)
                      +||....  ...+....+..|..-. ..+.+...+.+.+ .+|.+|...
T Consensus        74 taG~~~~--~g~~R~dll~~N~~I~-~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        74 PAGVPRK--PGMTRDDLFNVNAGIV-KDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             eCCCCCC--CCccHHHHHHHhHHHH-HHHHHHHHHhCCCeEEEEecCch
Confidence            9997432  2345677788887765 4777777766543 566666543

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.10  E-value=0.0018  Score=51.50  Aligned_cols=66  Identities=24%  Similarity=0.268  Sum_probs=43.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ||++.|.| +|-||+.|+.+|...|   ++|....|+.++ .....+.....+        ...+..++.+   .+|+||
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag---~eV~igs~r~~~~~~a~a~~l~~~i--------~~~~~~dA~~---~aDVVv   65 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAG---HEVIIGSSRGPKALAAAAAALGPLI--------TGGSNEDAAA---LADVVV   65 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCC---CeEEEecCCChhHHHHHHHhhcccc--------ccCChHHHHh---cCCEEE
Confidence            46677666 9999999999999999   778777565544 333333333221        1222344555   789998


Q ss_pred             EC
Q 020880           82 NC   83 (320)
Q Consensus        82 h~   83 (320)
                      -.
T Consensus        66 LA   67 (211)
T COG2085          66 LA   67 (211)
T ss_pred             Ee
Confidence            64

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.10  E-value=0.0027  Score=55.75  Aligned_cols=100  Identities=17%  Similarity=0.087  Sum_probs=64.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +.+|+|+||+|-+|..+++.+...|   .+|+++++++++.+.+.+.++-  . ...|..+.+++.+.+...  .++|+|
T Consensus       152 g~~VlI~Ga~G~vG~~aiqlAk~~G---~~Vi~~~~~~~~~~~~~~~lGa--~-~vi~~~~~~~~~~~i~~~~~~gvd~v  225 (338)
T cd08295         152 GETVFVSAASGAVGQLVGQLAKLKG---CYVVGSAGSDEKVDLLKNKLGF--D-DAFNYKEEPDLDAALKRYFPNGIDIY  225 (338)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHhcCC--c-eeEEcCCcccHHHHHHHhCCCCcEEE
Confidence            4689999999999999999999999   8898888887665544332331  1 123333322343333322  378999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      +++.|..  .                 +...++.++..|  +++.++..
T Consensus       226 ~d~~g~~--~-----------------~~~~~~~l~~~G--~iv~~G~~  253 (338)
T cd08295         226 FDNVGGK--M-----------------LDAVLLNMNLHG--RIAACGMI  253 (338)
T ss_pred             EECCCHH--H-----------------HHHHHHHhccCc--EEEEeccc
Confidence            9987621  0                 125566666666  78877643

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=97.10  E-value=0.0039  Score=52.19  Aligned_cols=106  Identities=15%  Similarity=0.028  Sum_probs=74.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh-CCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF-GQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~d~Vi   81 (320)
                      +.+|+|+||+|-+|+-..+.-.-+|   .+|++..-++++...+.+.++-.   ...|....+....+.+.. .++|+.|
T Consensus       151 GetvvVSaAaGaVGsvvgQiAKlkG---~rVVGiaGg~eK~~~l~~~lGfD---~~idyk~~d~~~~L~~a~P~GIDvyf  224 (340)
T COG2130         151 GETVVVSAAAGAVGSVVGQIAKLKG---CRVVGIAGGAEKCDFLTEELGFD---AGIDYKAEDFAQALKEACPKGIDVYF  224 (340)
T ss_pred             CCEEEEEecccccchHHHHHHHhhC---CeEEEecCCHHHHHHHHHhcCCc---eeeecCcccHHHHHHHHCCCCeEEEE
Confidence            5799999999999999998888889   89999999998887777655311   345666654333333332 4789999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhccc
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV  135 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~  135 (320)
                      .|.|-...                   ...+..+....  |++.++-++-|...
T Consensus       225 eNVGg~v~-------------------DAv~~~ln~~a--Ri~~CG~IS~YN~~  257 (340)
T COG2130         225 ENVGGEVL-------------------DAVLPLLNLFA--RIPVCGAISQYNAP  257 (340)
T ss_pred             EcCCchHH-------------------HHHHHhhcccc--ceeeeeehhhcCCC
Confidence            88763211                   13333344444  89999999999754

>PRK05442 malate dehydrogenase; Provisional

Probab=97.09  E-value=0.0026  Score=55.20  Aligned_cols=117  Identities=14%  Similarity=0.059  Sum_probs=69.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-----eEEEecCCCCC--hhhhhhhCCCcc-eEE-EeeCCCcccHHHHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-----DVAATHHSTPL--PQLLLDALPHSF-VFF-DVDLKSGSGFDAVALK   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-----~v~~~~r~~~~--~~~~~~~~~~~~-~~~-~~Dl~d~~~~~~~~~~   73 (320)
                      ++||.|+|++|.||+.++-.|+..+.. -     ++.+.+.++..  +......+.+.. .+. ...++. +.. +.+  
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~-~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~y-~~~--   78 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDML-GKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITD-DPN-VAF--   78 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhc-CCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEec-ChH-HHh--
Confidence            579999999999999999999876632 2     68888775432  221111110000 000 001111 111 223  


Q ss_pred             hCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc--CceEEEeec
Q 020880           74 FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK--ENLLIHLST  128 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~--~~~~v~~Ss  128 (320)
                       .++|+||-+||...-  ..++..+.+..|..-. ..+.+...+..  -..+|.+|.
T Consensus        79 -~daDiVVitaG~~~k--~g~tR~dll~~Na~i~-~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         79 -KDADVALLVGARPRG--PGMERKDLLEANGAIF-TAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             -CCCCEEEEeCCCCCC--CCCcHHHHHHHHHHHH-HHHHHHHHHhCCCCeEEEEeCC
Confidence             389999999996432  2346778888887765 47777777733  236666665

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.06  E-value=0.0031  Score=50.88  Aligned_cols=106  Identities=14%  Similarity=0.139  Sum_probs=62.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-------------------CChhhh---hhhCCCcceE--E
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-------------------PLPQLL---LDALPHSFVF--F   57 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-------------------~~~~~~---~~~~~~~~~~--~   57 (320)
                      ..++|+|.| .|-+|+++++.|...|.  -+++..+++.                   .+++..   ...+.+.+++  +
T Consensus        20 ~~~~VlviG-~GglGs~ia~~La~~Gv--~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        20 LNSHVLIIG-AGGLGSPAALYLAGAGV--GTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             cCCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            357899999 79999999999999993  3566666551                   111111   1122223332  2


Q ss_pred             EeeCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        58 ~~Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      ...+. .+.+.+.++   ++|+||.+...         ++..         ..+-+.|++.++ ++|+.++...+|
T Consensus        97 ~~~i~-~~~~~~~~~---~~D~Vi~~~d~---------~~~r---------~~l~~~~~~~~i-p~i~~~~~g~~G  149 (202)
T TIGR02356        97 KERVT-AENLELLIN---NVDLVLDCTDN---------FATR---------YLINDACVALGT-PLISAAVVGFGG  149 (202)
T ss_pred             hhcCC-HHHHHHHHh---CCCEEEECCCC---------HHHH---------HHHHHHHHHcCC-CEEEEEeccCeE
Confidence            22332 233444554   89999987532         1111         256667777776 788888766555

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=97.06  E-value=0.0023  Score=56.21  Aligned_cols=34  Identities=32%  Similarity=0.492  Sum_probs=27.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      +||.|+||||++|++|++.|.+..+  +++..+.++
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~--~~l~~v~~~   34 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPY--FELAKVVAS   34 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC--ceEEEEEEC
Confidence            4799999999999999998877653  577777544

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.06  E-value=0.0037  Score=56.36  Aligned_cols=42  Identities=19%  Similarity=0.302  Sum_probs=37.7

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhh
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL   46 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~   46 (320)
                      |.+|+|.|.| .|++|..++..|.+.|   ++|++..+++++.+.+
T Consensus         1 m~~~kI~VIG-lG~~G~~~A~~La~~G---~~V~~~D~~~~~v~~l   42 (415)
T PRK11064          1 MSFETISVIG-LGYIGLPTAAAFASRQ---KQVIGVDINQHAVDTI   42 (415)
T ss_pred             CCccEEEEEC-cchhhHHHHHHHHhCC---CEEEEEeCCHHHHHHH
Confidence            8889999999 7999999999999999   8999999987776654

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.05  E-value=0.0014  Score=56.72  Aligned_cols=38  Identities=13%  Similarity=0.198  Sum_probs=33.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ   44 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~   44 (320)
                      +|+|.|+| +|++|+.++..|+++|   ++|++..|+++...
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G---~~V~v~d~~~~~~~   39 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAG---HEVRLWDADPAAAA   39 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCC---CeeEEEeCCHHHHH
Confidence            46899999 8999999999999999   88999999876544

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.03  E-value=0.0011  Score=54.34  Aligned_cols=41  Identities=20%  Similarity=0.255  Sum_probs=34.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhh
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL   47 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~   47 (320)
                      |||.|+||+|.+|+.++..|.+.|   ++|....|++++...+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G---~~V~v~~r~~~~~~~l~   41 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAG---NKIIIGSRDLEKAEEAA   41 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCC---CEEEEEEcCHHHHHHHH
Confidence            579999999999999999999999   78888888876655443

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.01  E-value=0.0036  Score=54.55  Aligned_cols=97  Identities=24%  Similarity=0.288  Sum_probs=62.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ..+++|+||+|.+|..+++.+...|   .+|+.+.++++..+.+ ..++.  . ...+..+   +.+.+....++|.|++
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g---~~v~~~~~~~~~~~~~-~~~~~--~-~~~~~~~---~~~~~~~~~~~d~v~~  232 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALG---ARVIAVTRSPEKLKIL-KELGA--D-YVIDGSK---FSEDVKKLGGADVVIE  232 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcC---CeEEEEeCCHHHHHHH-HHcCC--c-EEEecHH---HHHHHHhccCCCEEEE
Confidence            4689999999999999999999999   8888888876544433 22221  1 1122222   3344444347999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      +++...                   ...+++.+...+  ++|.+++..
T Consensus       233 ~~g~~~-------------------~~~~~~~~~~~g--~~v~~g~~~  259 (332)
T cd08259         233 LVGSPT-------------------IEESLRSLNKGG--RLVLIGNVT  259 (332)
T ss_pred             CCChHH-------------------HHHHHHHhhcCC--EEEEEcCCC
Confidence            986320                   024455555555  788877653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.99  E-value=0.0034  Score=54.23  Aligned_cols=117  Identities=15%  Similarity=0.134  Sum_probs=72.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEE-eeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD-VDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+||.|+|+ |.||+.++-.|+..|.. .++.+.+.+++.+......+..-..+.. ..+....++++ ++   ++|+||
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~-~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~-~~---~adivv   76 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLA-DELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSV-TA---NSKVVI   76 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCC-CEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHH-hC---CCCEEE
Confidence            469999995 99999999999888754 5788888877654433222211110000 01111112332 33   899999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      -+||...-  ..++....+..|..-. ..+.+...+.+.+ .+|.+|.
T Consensus        77 itaG~~~k--~g~~R~dll~~N~~i~-~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          77 VTAGARQN--EGESRLDLVQRNVDIF-KGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             ECCCCCCC--CCCCHHHHHHHHHHHH-HHHHHHHHHhCCCcEEEEccC
Confidence            99987532  2345677788887665 3677777776533 5666664

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.99  E-value=0.0041  Score=53.81  Aligned_cols=116  Identities=19%  Similarity=0.227  Sum_probs=66.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceE--EEeeCCCcccHHHHHHHhCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVF--FDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      ||||.|.|| |.+|+.++..|...|.  .+|++.+++++........+......  ....++...++. .+.   ++|+|
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~--~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~-~~~---~aDiV   74 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKEL--GDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYE-DIA---GSDVV   74 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHH-HHC---CCCEE
Confidence            579999997 9999999999998872  28888888776543322211100000  011111111232 233   89999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      |.+++....  ...+..+.+..|+.-. ..+++...+...+ .+|..|.
T Consensus        75 ii~~~~p~~--~~~~r~~~~~~n~~i~-~~i~~~i~~~~~~~~viv~tN  120 (307)
T PRK06223         75 VITAGVPRK--PGMSRDDLLGINAKIM-KDVAEGIKKYAPDAIVIVVTN  120 (307)
T ss_pred             EECCCCCCC--cCCCHHHHHHHHHHHH-HHHHHHHHHHCCCeEEEEecC
Confidence            999885321  1223345555665544 3666666555433 4666654

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.98  E-value=0.0041  Score=56.89  Aligned_cols=74  Identities=15%  Similarity=0.091  Sum_probs=47.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-CCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-PHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      +++|+|||++| +|...++.|++.|   ++|.+.+++........+.+ ..++.+..+.  ++.   ++..  .++|.||
T Consensus         5 ~k~v~v~G~g~-~G~s~a~~l~~~G---~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~--~~~---~~~~--~~~d~vV   73 (447)
T PRK02472          5 NKKVLVLGLAK-SGYAAAKLLHKLG---ANVTVNDGKPFSENPEAQELLEEGIKVICGS--HPL---ELLD--EDFDLMV   73 (447)
T ss_pred             CCEEEEEeeCH-HHHHHHHHHHHCC---CEEEEEcCCCccchhHHHHHHhcCCEEEeCC--CCH---HHhc--CcCCEEE
Confidence            67999999988 9999999999999   88998887653322221111 1133333222  121   1222  1489999


Q ss_pred             ECCCcc
Q 020880           82 NCAALS   87 (320)
Q Consensus        82 h~a~~~   87 (320)
                      ..+|..
T Consensus        74 ~s~gi~   79 (447)
T PRK02472         74 KNPGIP   79 (447)
T ss_pred             ECCCCC
Confidence            998864

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.98  E-value=0.0039  Score=54.63  Aligned_cols=78  Identities=27%  Similarity=0.238  Sum_probs=54.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH-hCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK-FGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~~d~Vi   81 (320)
                      +++|||.||+|-+|++.++.+...|   ...+.+.++.+..+. ...++..   ...|..+++..+...+. -.++|+|+
T Consensus       158 g~~vLv~ggsggVG~~aiQlAk~~~---~~~v~t~~s~e~~~l-~k~lGAd---~vvdy~~~~~~e~~kk~~~~~~DvVl  230 (347)
T KOG1198|consen  158 GKSVLVLGGSGGVGTAAIQLAKHAG---AIKVVTACSKEKLEL-VKKLGAD---EVVDYKDENVVELIKKYTGKGVDVVL  230 (347)
T ss_pred             CCeEEEEeCCcHHHHHHHHHHHhcC---CcEEEEEcccchHHH-HHHcCCc---EeecCCCHHHHHHHHhhcCCCccEEE
Confidence            5799999999999999999998888   455666666555433 3333322   45688886544444332 24799999


Q ss_pred             ECCCcc
Q 020880           82 NCAALS   87 (320)
Q Consensus        82 h~a~~~   87 (320)
                      +|+|..
T Consensus       231 D~vg~~  236 (347)
T KOG1198|consen  231 DCVGGS  236 (347)
T ss_pred             ECCCCC
Confidence            999853

>PLN02602 lactate dehydrogenase

Probab=96.97  E-value=0.0042  Score=54.40  Aligned_cols=116  Identities=15%  Similarity=0.172  Sum_probs=70.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEE-eeCCCcccHHHHHHHhCCCCEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD-VDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +||.|+|+ |.||+.++-.|+..+.. .++.+.+.+++++......+.+...+.. ..+....++++ ++   ++|+||-
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~-~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~~-~~---daDiVVi  111 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLA-DELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYAV-TA---GSDLCIV  111 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCC-CEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHHH-hC---CCCEEEE
Confidence            69999995 99999999999888753 5788888877655433322211100000 12211111222 33   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      +||....+  .++..+.+..|+.-. ..+.+...+.+.+ .+|.+|.
T Consensus       112 tAG~~~k~--g~tR~dll~~N~~I~-~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        112 TAGARQIP--GESRLNLLQRNVALF-RKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             CCCCCCCc--CCCHHHHHHHHHHHH-HHHHHHHHHHCCCeEEEEecC
Confidence            99974322  245567777787654 3677777665533 5666664

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.96  E-value=0.0062  Score=48.95  Aligned_cols=107  Identities=14%  Similarity=0.121  Sum_probs=62.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC---------------------h---hhhhhhCCCcce--E
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL---------------------P---QLLLDALPHSFV--F   56 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~---------------------~---~~~~~~~~~~~~--~   56 (320)
                      ..+|+|.|++| +|+++++.|...|-  -+++..+.+.-.                     .   ...+..+.+.++  .
T Consensus        19 ~s~VlviG~gg-lGsevak~L~~~GV--g~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          19 SAKVLIIGAGA-LGAEIAKNLVLAGI--DSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             hCcEEEECCCH-HHHHHHHHHHHcCC--CEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            56899999777 99999999999994  345444433110                     0   011112223333  2


Q ss_pred             EEeeCCC-cccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcc
Q 020880           57 FDVDLKS-GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG  134 (320)
Q Consensus        57 ~~~Dl~d-~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~  134 (320)
                      +..++.+ .+...+.++   ++|+||.+...         ....         ..+-+.|++.++ ++|+.++...||.
T Consensus        96 ~~~~~~~~~~~~~~~~~---~~dvVi~~~d~---------~~~~---------~~ln~~c~~~~i-p~i~~~~~G~~G~  152 (198)
T cd01485          96 VEEDSLSNDSNIEEYLQ---KFTLVIATEEN---------YERT---------AKVNDVCRKHHI-PFISCATYGLIGY  152 (198)
T ss_pred             EecccccchhhHHHHHh---CCCEEEECCCC---------HHHH---------HHHHHHHHHcCC-CEEEEEeecCEEE
Confidence            3333431 222334444   78888866321         1110         256677888887 8999988777764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.93  E-value=0.0033  Score=56.51  Aligned_cols=113  Identities=15%  Similarity=0.134  Sum_probs=73.1

Q ss_pred             EEEEEcCCChhhHHHHHHHhhc-------cCCCceEEEecCCCCChhhhhhhCCCcc-eE---EEeeCCCcccHHHHHHH
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEI-------EGKPYDVAATHHSTPLPQLLLDALPHSF-VF---FDVDLKSGSGFDAVALK   73 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~-------g~~v~~v~~~~r~~~~~~~~~~~~~~~~-~~---~~~Dl~d~~~~~~~~~~   73 (320)
                      ||.|+|++|.||++++-.|+..       +.. .+++..+++++++....-.+.+.. .+   +..--.+   . +.++ 
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~-~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~---y-e~~k-  175 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIA-LKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDP---Y-EVFQ-  175 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcc-cEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCC---H-HHhC-
Confidence            8999999999999999999887       532 478888888777654333221111 00   1100112   2 1233 


Q ss_pred             hCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhh-ccC-ceEEEeec
Q 020880           74 FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE-NKE-NLLIHLST  128 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~-~~~-~~~v~~Ss  128 (320)
                        ++|+||-+||....  ..++..+.++.|+.-. ..+.+...+ .+. ..+|.+|.
T Consensus       176 --daDiVVitAG~prk--pG~tR~dLl~~N~~I~-k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        176 --DAEWALLIGAKPRG--PGMERADLLDINGQIF-AEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             --cCCEEEECCCCCCC--CCCCHHHHHHHHHHHH-HHHHHHHHHhcCCCeEEEEcCC
Confidence              89999999997432  2346678888888765 477777777 343 26677775

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.92  E-value=0.0044  Score=54.04  Aligned_cols=100  Identities=12%  Similarity=0.006  Sum_probs=65.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +.+|||+||+|-+|..+++.+...|   .+|+++++++++.+.. ..++-  . ...|..+.+.+.+.....  .++|+|
T Consensus       139 g~~VLI~ga~g~vG~~aiqlAk~~G---~~Vi~~~~s~~~~~~~-~~lGa--~-~vi~~~~~~~~~~~~~~~~~~gvdvv  211 (325)
T TIGR02825       139 GETVMVNAAAGAVGSVVGQIAKLKG---CKVVGAAGSDEKVAYL-KKLGF--D-VAFNYKTVKSLEETLKKASPDGYDCY  211 (325)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHH-HHcCC--C-EEEeccccccHHHHHHHhCCCCeEEE
Confidence            4689999999999999999998899   7888888886655444 33332  2 233444433444434322  268999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      +++.|..  .                 +...++.++..|  ++|.++...
T Consensus       212 ~d~~G~~--~-----------------~~~~~~~l~~~G--~iv~~G~~~  240 (325)
T TIGR02825       212 FDNVGGE--F-----------------SNTVIGQMKKFG--RIAICGAIS  240 (325)
T ss_pred             EECCCHH--H-----------------HHHHHHHhCcCc--EEEEecchh
Confidence            9987631  0                 024555666666  788877543

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.89  E-value=0.0011  Score=51.52  Aligned_cols=65  Identities=23%  Similarity=0.325  Sum_probs=47.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||+|.+.| .|-+|+.+++.|+++|   ++|++..|++++.+.+.+..   .+  .     .++..++++   ++|+||-
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g---~~v~~~d~~~~~~~~~~~~g---~~--~-----~~s~~e~~~---~~dvvi~   63 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAG---YEVTVYDRSPEKAEALAEAG---AE--V-----ADSPAEAAE---QADVVIL   63 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTT---TEEEEEESSHHHHHHHHHTT---EE--E-----ESSHHHHHH---HBSEEEE
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcC---CeEEeeccchhhhhhhHHhh---hh--h-----hhhhhhHhh---cccceEe
Confidence            68999999 7999999999999999   89999999987777666531   11  1     224566777   6799997


Q ss_pred             CC
Q 020880           83 CA   84 (320)
Q Consensus        83 ~a   84 (320)
                      |-
T Consensus        64 ~v   65 (163)
T PF03446_consen   64 CV   65 (163)
T ss_dssp             -S
T ss_pred             ec
Confidence            64

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.89  E-value=0.0018  Score=55.94  Aligned_cols=75  Identities=17%  Similarity=0.296  Sum_probs=62.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcc-cHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS-GFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~d~Vi   81 (320)
                      +++||++| +||+.+-+++.|.++++  .+|+..+|....++++....  +++.+..|+.+++ .++...+   ..|.|+
T Consensus         2 ~~~vlllg-sg~v~~p~~d~ls~~~d--v~vtva~~~~~~~~~~~~~~--~~~av~ldv~~~~~~L~~~v~---~~D~vi   73 (445)
T KOG0172|consen    2 KKGVLLLG-SGFVSRPVADFLSRKKD--VNVTVASRTLKDAEALVKGI--NIKAVSLDVADEELALRKEVK---PLDLVI   73 (445)
T ss_pred             CcceEEec-CccccchHHHHHhhcCC--ceEEEehhhHHHHHHHhcCC--CccceEEEccchHHHHHhhhc---ccceee
Confidence            67899999 89999999999998876  78999999888787776643  4788999999988 6666665   679998


Q ss_pred             ECCC
Q 020880           82 NCAA   85 (320)
Q Consensus        82 h~a~   85 (320)
                      -+.-
T Consensus        74 SLlP   77 (445)
T KOG0172|consen   74 SLLP   77 (445)
T ss_pred             eecc
Confidence            7653

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.87  E-value=0.0045  Score=53.89  Aligned_cols=100  Identities=14%  Similarity=0.124  Sum_probs=57.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhh-ccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSE-IEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~-~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .++|.|.||||++|+.+++.|.+ ...++-++..+....+..+..  .+... ....-++ |++    .++   ++|+||
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~--~~~~~-~l~v~~~-~~~----~~~---~~Divf   73 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTV--QFKGR-EIIIQEA-KIN----SFE---GVDIAF   73 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCe--eeCCc-ceEEEeC-CHH----Hhc---CCCEEE
Confidence            46899999999999999999984 663322254444332222221  11111 1122222 322    233   789999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      -+++..   .+                ..+...+.+.|+ .+|=.||..-+.
T Consensus        74 ~a~~~~---~s----------------~~~~~~~~~~G~-~VID~Ss~fR~~  105 (347)
T PRK06728         74 FSAGGE---VS----------------RQFVNQAVSSGA-IVIDNTSEYRMA  105 (347)
T ss_pred             ECCChH---HH----------------HHHHHHHHHCCC-EEEECchhhcCC
Confidence            887431   00                366666667776 777788776553

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.87  E-value=0.0042  Score=52.44  Aligned_cols=116  Identities=16%  Similarity=0.128  Sum_probs=69.2

Q ss_pred             EEEEcCCChhhHHHHHHHhhcc--CCCceEEEecCCCCChhhhhhhCCCcceEE-EeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIE--GKPYDVAATHHSTPLPQLLLDALPHSFVFF-DVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g--~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |.|.||+|.+|+.++..|+..|  .. .++.+.++++++.......+..-.... ...+.-..++.+.++   ++|+||-
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~-~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~---~aDiVv~   76 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLA-IELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFK---DADVVII   76 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcc-eEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhC---CCCEEEE
Confidence            5799999999999999998877  33 678888888766554433321111111 112211122334454   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      +++....+  ..........|+... ..+.+...+.... .+|..|.
T Consensus        77 t~~~~~~~--g~~r~~~~~~n~~i~-~~i~~~i~~~~p~a~~i~~tN  120 (263)
T cd00650          77 TAGVGRKP--GMGRLDLLKRNVPIV-KEIGDNIEKYSPDAWIIVVSN  120 (263)
T ss_pred             CCCCCCCc--CCCHHHHHHHHHHHH-HHHHHHHHHHCCCeEEEEecC
Confidence            99865332  223345566666554 3677777665433 4555554

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.83  E-value=0.0081  Score=45.08  Aligned_cols=105  Identities=14%  Similarity=0.222  Sum_probs=62.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-------------------Chhhh---hhhCCCc--ceEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-------------------LPQLL---LDALPHS--FVFFD   58 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-------------------~~~~~---~~~~~~~--~~~~~   58 (320)
                      .++|+|.| .|-+|+.+++.|...|.  -++...+...=                   +.+..   +....+.  +..+.
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv--~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~   78 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGV--GKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIP   78 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTT--SEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEE
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCC--CceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeee
Confidence            46899999 79999999999999994  24555444310                   00001   1111122  33344


Q ss_pred             eeCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        59 ~Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      .++ +.+...+.++   ++|+||.+....         ..        . ..+.+.|++.+. ++|+.++...+|
T Consensus        79 ~~~-~~~~~~~~~~---~~d~vi~~~d~~---------~~--------~-~~l~~~~~~~~~-p~i~~~~~g~~G  130 (135)
T PF00899_consen   79 EKI-DEENIEELLK---DYDIVIDCVDSL---------AA--------R-LLLNEICREYGI-PFIDAGVNGFYG  130 (135)
T ss_dssp             SHC-SHHHHHHHHH---TSSEEEEESSSH---------HH--------H-HHHHHHHHHTT--EEEEEEEETTEE
T ss_pred             ccc-cccccccccc---CCCEEEEecCCH---------HH--------H-HHHHHHHHHcCC-CEEEEEeecCEE
Confidence            455 3344556665   889999875321         11        0 266677888887 788888776555

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.82  E-value=0.002  Score=51.87  Aligned_cols=69  Identities=20%  Similarity=0.163  Sum_probs=47.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |.+|+|+|+|. |-+|+++++.|.+.|   ++|++.+++++......+.++  ..  ..|.   +   ++..  .++|++
T Consensus        26 l~gk~v~I~G~-G~vG~~~A~~L~~~G---~~Vvv~D~~~~~~~~~~~~~g--~~--~v~~---~---~l~~--~~~Dv~   89 (200)
T cd01075          26 LEGKTVAVQGL-GKVGYKLAEHLLEEG---AKLIVADINEEAVARAAELFG--AT--VVAP---E---EIYS--VDADVF   89 (200)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHcC--CE--EEcc---h---hhcc--ccCCEE
Confidence            34689999995 799999999999999   888888887655554444321  22  1221   1   2333  179999


Q ss_pred             EECCC
Q 020880           81 VNCAA   85 (320)
Q Consensus        81 ih~a~   85 (320)
                      +.||.
T Consensus        90 vp~A~   94 (200)
T cd01075          90 APCAL   94 (200)
T ss_pred             Eeccc
Confidence            98875

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.82  E-value=0.0029  Score=58.83  Aligned_cols=72  Identities=19%  Similarity=0.244  Sum_probs=49.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++++|+|+ |-+|++++..|.+.|   ++|+.+.|+.++.+.+.+.++..  .  .++.+   +.+...  ...|+|||
T Consensus       379 ~k~vlIlGa-GGagrAia~~L~~~G---~~V~i~nR~~e~a~~la~~l~~~--~--~~~~~---~~~~~~--~~~diiIN  445 (529)
T PLN02520        379 GKLFVVIGA-GGAGKALAYGAKEKG---ARVVIANRTYERAKELADAVGGQ--A--LTLAD---LENFHP--EEGMILAN  445 (529)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHhCCc--e--eeHhH---hhhhcc--ccCeEEEe
Confidence            578999997 899999999999999   78999999877766665544211  1  11111   111111  25789999


Q ss_pred             CCCcc
Q 020880           83 CAALS   87 (320)
Q Consensus        83 ~a~~~   87 (320)
                      +....
T Consensus       446 tT~vG  450 (529)
T PLN02520        446 TTSVG  450 (529)
T ss_pred             cccCC
Confidence            88654

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=96.80  E-value=0.011  Score=49.45  Aligned_cols=105  Identities=16%  Similarity=0.074  Sum_probs=77.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +++|+|.||+|-+|+-+-+...-.|   ..|++..-++++...+...++-.   .-.|..++.++.+++.+.  +++|+-
T Consensus       154 geTv~VSaAsGAvGql~GQ~Ak~~G---c~VVGsaGS~EKv~ll~~~~G~d---~afNYK~e~~~~~aL~r~~P~GIDiY  227 (343)
T KOG1196|consen  154 GETVFVSAASGAVGQLVGQFAKLMG---CYVVGSAGSKEKVDLLKTKFGFD---DAFNYKEESDLSAALKRCFPEGIDIY  227 (343)
T ss_pred             CCEEEEeeccchhHHHHHHHHHhcC---CEEEEecCChhhhhhhHhccCCc---cceeccCccCHHHHHHHhCCCcceEE
Confidence            4799999999999999888878889   89999999998887777665422   234666665666666654  478888


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcc
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG  134 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~  134 (320)
                      |.+.|-..                   +..++..++.++  |++.++-++.|..
T Consensus       228 feNVGG~~-------------------lDavl~nM~~~g--ri~~CG~ISqYN~  260 (343)
T KOG1196|consen  228 FENVGGKM-------------------LDAVLLNMNLHG--RIAVCGMISQYNL  260 (343)
T ss_pred             EeccCcHH-------------------HHHHHHhhhhcc--ceEeeeeehhccc
Confidence            87765310                   125555666666  9999999998864

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.79  E-value=0.011  Score=49.10  Aligned_cols=93  Identities=14%  Similarity=0.100  Sum_probs=64.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |++|+|+|||+= |+.|++.|.+.|   +.|+..+-.+...   ..  ........+-+.|.+.+.+++.. ++++.||.
T Consensus         2 ~~~IlvlgGT~e-gr~la~~L~~~g---~~v~~Svat~~g~---~~--~~~~~v~~G~l~~~~~l~~~l~~-~~i~~VID   71 (248)
T PRK08057          2 MPRILLLGGTSE-ARALARALAAAG---VDIVLSLAGRTGG---PA--DLPGPVRVGGFGGAEGLAAYLRE-EGIDLVID   71 (248)
T ss_pred             CceEEEEechHH-HHHHHHHHHhCC---CeEEEEEccCCCC---cc--cCCceEEECCCCCHHHHHHHHHH-CCCCEEEE
Confidence            577999999874 899999999999   5555544443222   11  12455677888788899999976 49999998


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCc
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN  121 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~  121 (320)
                      ..=++             ..++.   .++.++|++.+++
T Consensus        72 ATHPf-------------A~~is---~~a~~ac~~~~ip   94 (248)
T PRK08057         72 ATHPY-------------AAQIS---ANAAAACRALGIP   94 (248)
T ss_pred             CCCcc-------------HHHHH---HHHHHHHHHhCCc
Confidence            64211             11111   4889999999884

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.78  E-value=0.004  Score=54.79  Aligned_cols=98  Identities=18%  Similarity=0.105  Sum_probs=63.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      .+|||+||+|-+|..+++.+...|   . +|+++++++++.+.+.+.++-  . ...|..+. ++.+.+...  .++|+|
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G---~~~Vi~~~~s~~~~~~~~~~lGa--~-~vi~~~~~-~~~~~i~~~~~~gvd~v  228 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLG---CSRVVGICGSDEKCQLLKSELGF--D-AAINYKTD-NVAERLRELCPEGVDVY  228 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcC---CCEEEEEcCCHHHHHHHHHhcCC--c-EEEECCCC-CHHHHHHHHCCCCceEE
Confidence            689999999999999999888889   7 799888887655544433332  2 12343332 233333222  369999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      |++.+...           .        ...++.++..|  ++|.++..
T Consensus       229 id~~g~~~-----------~--------~~~~~~l~~~G--~iv~~G~~  256 (345)
T cd08293         229 FDNVGGEI-----------S--------DTVISQMNENS--HIILCGQI  256 (345)
T ss_pred             EECCCcHH-----------H--------HHHHHHhccCC--EEEEEeee
Confidence            99876310           0        24555566666  78887754

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.78  E-value=0.0048  Score=45.39  Aligned_cols=72  Identities=28%  Similarity=0.318  Sum_probs=41.8

Q ss_pred             EEEEEcCCChhhHHHHHHHhhc-cCCCceEEEe-cCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAAT-HHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |+.|+|++|.+|..+++.|.+. +   +++.++ .|+.+..+......+ .+..+..+..+.+.+.   .  .++|+||-
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~---~~l~av~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~--~~~DvV~~   71 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPD---FEVVALAASARSAGKRVSEAGP-HLKGEVVLELEPEDFE---E--LAVDIVFL   71 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCC---ceEEEEEechhhcCcCHHHHCc-ccccccccccccCChh---h--cCCCEEEE
Confidence            5899999999999999999985 6   677766 333333322222222 1211111122223332   1  27899998


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      |..
T Consensus        72 ~~~   74 (122)
T smart00859       72 ALP   74 (122)
T ss_pred             cCC
Confidence            764

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.78  E-value=0.0024  Score=46.46  Aligned_cols=71  Identities=18%  Similarity=0.253  Sum_probs=54.4

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEECCC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAA   85 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a~   85 (320)
                      |+|.| .|-+|..+++.|.+.+   .+|+.+.++++..+.+.+.   .+.++.+|.+|++.++++--  .+++.|+-+..
T Consensus         1 vvI~G-~g~~~~~i~~~L~~~~---~~vvvid~d~~~~~~~~~~---~~~~i~gd~~~~~~l~~a~i--~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKEGG---IDVVVIDRDPERVEELREE---GVEVIYGDATDPEVLERAGI--EKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTT---SEEEEEESSHHHHHHHHHT---TSEEEES-TTSHHHHHHTTG--GCESEEEEESS
T ss_pred             eEEEc-CCHHHHHHHHHHHhCC---CEEEEEECCcHHHHHHHhc---ccccccccchhhhHHhhcCc--cccCEEEEccC
Confidence            67888 5899999999999976   7899999997776665553   47789999999988776532  38888886643

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.76  E-value=0.0054  Score=53.79  Aligned_cols=102  Identities=14%  Similarity=0.045  Sum_probs=56.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhh-ccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSE-IEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~-~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      |++|.|.||||++|+.|++.|++ ....+-++..+..+.+.. .. ..+.+. .....++.+++.    +.   ++|+||
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~-~~-~~f~g~-~~~v~~~~~~~~----~~---~~Divf   70 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGG-AA-PSFGGK-EGTLQDAFDIDA----LK---KLDIII   70 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCC-cc-cccCCC-cceEEecCChhH----hc---CCCEEE
Confidence            47899999999999999995555 442222255544432211 11 111111 123334443322    33   799999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeechhhhc
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTDQVYE  133 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~  133 (320)
                      -+++..   .+                ..+...+.+.|++ .+|=.||..-+.
T Consensus        71 ~a~~~~---~s----------------~~~~~~~~~aG~~~~VID~Ss~fR~~  104 (369)
T PRK06598         71 TCQGGD---YT----------------NEVYPKLRAAGWQGYWIDAASTLRMK  104 (369)
T ss_pred             ECCCHH---HH----------------HHHHHHHHhCCCCeEEEECChHHhCC
Confidence            887532   00                3666666677752 466666655443

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.75  E-value=0.0073  Score=51.57  Aligned_cols=84  Identities=17%  Similarity=0.186  Sum_probs=53.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      .||.|.|||||.|..|++.|....+  +++..+..+..                 .+   +.+..++++   ++|+||-+
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~--~el~~l~s~~~-----------------~~---~~~~~~~~~---~~D~vFla   56 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDD--IELLSIAPDRR-----------------KD---AAERAKLLN---AADVAILC   56 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCC--eEEEEEecccc-----------------cC---cCCHhHhhc---CCCEEEEC
Confidence            4799999999999999999987754  67766543321                 01   111223444   78999977


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      ....   .+                ..++..+.+.|+ ++|=.|+..-.
T Consensus        57 lp~~---~s----------------~~~~~~~~~~g~-~VIDlSadfRl   85 (310)
T TIGR01851        57 LPDD---AA----------------REAVSLVDNPNT-CIIDASTAYRT   85 (310)
T ss_pred             CCHH---HH----------------HHHHHHHHhCCC-EEEECChHHhC
Confidence            6321   00                255555556676 78888876543

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.74  E-value=0.0095  Score=47.07  Aligned_cols=98  Identities=15%  Similarity=0.229  Sum_probs=60.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+++|.|.| .|-||+.+++.|..-|   .+|++..|.......... .  .   +     ...++++++.   ++|+|+
T Consensus        35 ~g~tvgIiG-~G~IG~~vA~~l~~fG---~~V~~~d~~~~~~~~~~~-~--~---~-----~~~~l~ell~---~aDiv~   96 (178)
T PF02826_consen   35 RGKTVGIIG-YGRIGRAVARRLKAFG---MRVIGYDRSPKPEEGADE-F--G---V-----EYVSLDELLA---QADIVS   96 (178)
T ss_dssp             TTSEEEEES-TSHHHHHHHHHHHHTT----EEEEEESSCHHHHHHHH-T--T---E-----EESSHHHHHH---H-SEEE
T ss_pred             CCCEEEEEE-EcCCcCeEeeeeecCC---ceeEEecccCChhhhccc-c--c---c-----eeeehhhhcc---hhhhhh
Confidence            368999999 8999999999999999   999999998654431111 0  1   1     1224667777   689988


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      .+.......           .++.+  ...++.+++..  .||.++-..+.
T Consensus        97 ~~~plt~~T-----------~~li~--~~~l~~mk~ga--~lvN~aRG~~v  132 (178)
T PF02826_consen   97 LHLPLTPET-----------RGLIN--AEFLAKMKPGA--VLVNVARGELV  132 (178)
T ss_dssp             E-SSSSTTT-----------TTSBS--HHHHHTSTTTE--EEEESSSGGGB
T ss_pred             hhhcccccc-----------ceeee--eeeeeccccce--EEEeccchhhh
Confidence            776543111           11111  25555555443  57777765554

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.73  E-value=0.011  Score=51.32  Aligned_cols=117  Identities=18%  Similarity=0.198  Sum_probs=68.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceE--EEeeCCCcccHHHHHHHhCCCCE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVF--FDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      ..+||.|.|| |.+|+.++..|...|.  .++.+.+++++........+......  ....+....+++ .+.   ++|+
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~--~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~---~ADi   76 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNL--GDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIK---DSDV   76 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCC--CeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhC---CCCE
Confidence            3579999996 9999999998888774  47888888765543211111000000  001111112233 344   8999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      ||.+++....+  ..+....+..|..-. ..+.+.+.+...+ .+|.+|.
T Consensus        77 VVitag~~~~~--g~~r~dll~~n~~i~-~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         77 VVITAGVQRKE--EMTREDLLTINGKIM-KSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             EEECCCCCCCC--CCCHHHHHHHHHHHH-HHHHHHHHHHCCCeEEEEecC
Confidence            99999864322  234456666676443 3777777766543 4666665

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.71  E-value=0.0093  Score=52.64  Aligned_cols=99  Identities=17%  Similarity=0.094  Sum_probs=62.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +.+|||+||+|-+|..+++.+...|   .+|+++.+++++.+.+...++-  . ...|..+.+.+.+.+...  +++|+|
T Consensus       159 g~~VlV~GaaG~vG~~aiqlAk~~G---~~Vi~~~~~~~k~~~~~~~lGa--~-~vi~~~~~~~~~~~i~~~~~~gvD~v  232 (348)
T PLN03154        159 GDSVFVSAASGAVGQLVGQLAKLHG---CYVVGSAGSSQKVDLLKNKLGF--D-EAFNYKEEPDLDAALKRYFPEGIDIY  232 (348)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcC---CEEEEEcCCHHHHHHHHHhcCC--C-EEEECCCcccHHHHHHHHCCCCcEEE
Confidence            4689999999999999999999999   7888888876655443323332  1 223433322343333322  268999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      |.+.|..  .                 +...++.++..|  +++.++.
T Consensus       233 ~d~vG~~--~-----------------~~~~~~~l~~~G--~iv~~G~  259 (348)
T PLN03154        233 FDNVGGD--M-----------------LDAALLNMKIHG--RIAVCGM  259 (348)
T ss_pred             EECCCHH--H-----------------HHHHHHHhccCC--EEEEECc
Confidence            9987621  0                 024555566666  7877664

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.71  E-value=0.0054  Score=52.31  Aligned_cols=77  Identities=21%  Similarity=0.190  Sum_probs=51.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++++|.| +|-.|+.++..|.+.|.  -+|+...|+.++++.+.+.++.......  +...+.+...+   .++|+|||
T Consensus       125 ~k~vlvlG-aGGaarai~~aL~~~G~--~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~---~~~DiVIn  196 (282)
T TIGR01809       125 GFRGLVIG-AGGTSRAAVYALASLGV--TDITVINRNPDKLSRLVDLGVQVGVITR--LEGDSGGLAIE---KAAEVLVS  196 (282)
T ss_pred             CceEEEEc-CcHHHHHHHHHHHHcCC--CeEEEEeCCHHHHHHHHHHhhhcCccee--ccchhhhhhcc---cCCCEEEE
Confidence            57899999 58899999999999993  3688899998888777665432111111  11111222222   37899999


Q ss_pred             CCCcc
Q 020880           83 CAALS   87 (320)
Q Consensus        83 ~a~~~   87 (320)
                      +....
T Consensus       197 aTp~g  201 (282)
T TIGR01809       197 TVPAD  201 (282)
T ss_pred             CCCCC
Confidence            97654

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.67  E-value=0.01  Score=48.89  Aligned_cols=106  Identities=16%  Similarity=0.149  Sum_probs=61.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC-------------------CCChhhhh---hhCCCc--ceEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-------------------TPLPQLLL---DALPHS--FVFF   57 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~-------------------~~~~~~~~---~~~~~~--~~~~   57 (320)
                      ...+|+|.| .|-+|+++++.|...|.  -+++..+.+                   ..+.+...   ....+.  +..+
T Consensus        20 ~~~~VlivG-~GglGs~va~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          20 KNARVLVVG-AGGLGSPAAEYLAAAGV--GKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             hCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            357999999 79999999999999994  344444332                   11111111   111222  3333


Q ss_pred             EeeCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        58 ~~Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      ..+++ .+.+.+.++   ++|+||.|...         +...         ..+-+.|.+.++ ++|+.+....+|
T Consensus        97 ~~~i~-~~~~~~~~~---~~DvVi~~~d~---------~~~r---------~~l~~~~~~~~i-p~i~~g~~g~~g  149 (228)
T cd00757          97 NERLD-AENAEELIA---GYDLVLDCTDN---------FATR---------YLINDACVKLGK-PLVSGAVLGFEG  149 (228)
T ss_pred             cceeC-HHHHHHHHh---CCCEEEEcCCC---------HHHH---------HHHHHHHHHcCC-CEEEEEeccCEE
Confidence            33442 234445554   79999988642         1110         256677777776 888887665554

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.67  E-value=0.014  Score=46.89  Aligned_cols=104  Identities=18%  Similarity=0.112  Sum_probs=59.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-------------------hh---hhhhhCCCcce--EEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-------------------PQ---LLLDALPHSFV--FFD   58 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-------------------~~---~~~~~~~~~~~--~~~   58 (320)
                      .++|+|.|++| +|+++++.|...|-  -+++..+...-.                   .+   +.+..+.+.++  .+.
T Consensus        21 ~s~VlIiG~gg-lG~evak~La~~GV--g~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~   97 (197)
T cd01492          21 SARILLIGLKG-LGAEIAKNLVLSGI--GSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT   97 (197)
T ss_pred             hCcEEEEcCCH-HHHHHHHHHHHcCC--CEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            56899999766 99999999999994  234444433111                   10   11112223332  222


Q ss_pred             eeCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        59 ~Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      ..+.+  ...+.++   ++|+||.+...         +..         ...+-+.|++.++ ++|+.++...+|
T Consensus        98 ~~~~~--~~~~~~~---~~dvVi~~~~~---------~~~---------~~~ln~~c~~~~i-p~i~~~~~G~~G  148 (197)
T cd01492          98 DDISE--KPEEFFS---QFDVVVATELS---------RAE---------LVKINELCRKLGV-KFYATGVHGLFG  148 (197)
T ss_pred             cCccc--cHHHHHh---CCCEEEECCCC---------HHH---------HHHHHHHHHHcCC-CEEEEEecCCEE
Confidence            23321  1233344   78888866321         111         1256677888887 789988877665

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.66  E-value=0.0035  Score=53.45  Aligned_cols=68  Identities=18%  Similarity=0.251  Sum_probs=46.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+++++|+|. |-+|+.+++.|...|   .+|+...|++++...... .  ....+     ..+.+.+.+.   ++|+||
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G---~~V~v~~R~~~~~~~~~~-~--g~~~~-----~~~~l~~~l~---~aDiVi  214 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALG---ARVFVGARSSADLARITE-M--GLIPF-----PLNKLEEKVA---EIDIVI  214 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHH-C--CCeee-----cHHHHHHHhc---cCCEEE
Confidence            3689999995 889999999999999   889999888654433221 1  11111     1223444454   899999


Q ss_pred             ECC
Q 020880           82 NCA   84 (320)
Q Consensus        82 h~a   84 (320)
                      ++.
T Consensus       215 nt~  217 (287)
T TIGR02853       215 NTI  217 (287)
T ss_pred             ECC
Confidence            976

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.64  E-value=0.0072  Score=52.08  Aligned_cols=109  Identities=14%  Similarity=0.165  Sum_probs=69.6

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCC--------cceEEEeeCCCcccHHHHHHHhCC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH--------SFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~--------~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      ||.|.|+ |.||+.++-.|+.++.. -++++.+..++++......+..        .+....   .|   ++ .++   +
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~-~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~---y~-~~~---~   68 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLF-SEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GD---YD-DCA---D   68 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCC-CEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CC---HH-HhC---C
Confidence            5899997 99999999999988743 4688888876655433322211        222221   12   22 233   8


Q ss_pred             CCEEEECCCccCccccccC--chhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           77 PDVVVNCAALSVPRVCEND--PDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~--~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      +|+||-+||...-+  ..+  ..+.+..|..-. ..+.+...+.+.. .+|.+|.
T Consensus        69 aDivvitaG~~~kp--g~tr~R~dll~~N~~I~-~~i~~~i~~~~p~~i~ivvsN  120 (307)
T cd05290          69 ADIIVITAGPSIDP--GNTDDRLDLAQTNAKII-REIMGNITKVTKEAVIILITN  120 (307)
T ss_pred             CCEEEECCCCCCCC--CCCchHHHHHHHHHHHH-HHHHHHHHHhCCCeEEEEecC
Confidence            99999999974322  123  467788887665 4778888777654 4555554

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=96.60  E-value=0.065  Score=49.46  Aligned_cols=145  Identities=17%  Similarity=0.190  Sum_probs=87.9

Q ss_pred             CcEEEEEcCC-ChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhh----hC---CCcceEEEeeCCCcccHHHHHHH
Q 020880            3 KKRVLVVGGT-GYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLD----AL---PHSFVFFDVDLKSGSGFDAVALK   73 (320)
Q Consensus         3 ~~~ilItGat-G~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~----~~---~~~~~~~~~Dl~d~~~~~~~~~~   73 (320)
                      .+-++||||+ |-||..+++.||+.|   .+|+++..+-+. ...+..    ..   +....++.+|.....+++.+++-
T Consensus       396 d~valVTGA~~gSIaa~Vv~~LL~gG---AtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew  472 (866)
T COG4982         396 DKVALVTGASKGSIAAAVVARLLAGG---ATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW  472 (866)
T ss_pred             cceEEEecCCCcchHHHHHHHHHhCC---cEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence            3678999976 899999999999999   777766655332 222222    11   23455677787777666666532


Q ss_pred             h------------------CCCCEEEECCCccCc-cccccCchhh-----hhccccccHHHHHhhhhh----ccCc---e
Q 020880           74 F------------------GQPDVVVNCAALSVP-RVCENDPDSA-----MSINVPSSLVNWLSSFTE----NKEN---L  122 (320)
Q Consensus        74 ~------------------~~~d~Vih~a~~~~~-~~~~~~~~~~-----~~~n~~~~~~~~l~~~~~----~~~~---~  122 (320)
                      +                  -.+|.+|-+|++... .....++..-     +--|+.    +++-.+++    .++.   +
T Consensus       473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~----Rliggl~~~~s~r~v~~R~h  548 (866)
T COG4982         473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVL----RLIGGLKKQGSSRGVDTRLH  548 (866)
T ss_pred             hccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHH----HHHHHhhhhccccCcccceE
Confidence            1                  137889999887532 2333333322     222332    33333333    2221   5


Q ss_pred             EEEeechh--hhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHHcC
Q 020880          123 LIHLSTDQ--VYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCS  167 (320)
Q Consensus       123 ~v~~Ss~~--vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~  167 (320)
                      +|...|..  -||             ....|+.+|...|.++.+++.
T Consensus       549 VVLPgSPNrG~FG-------------gDGaYgEsK~aldav~~RW~s  582 (866)
T COG4982         549 VVLPGSPNRGMFG-------------GDGAYGESKLALDAVVNRWHS  582 (866)
T ss_pred             EEecCCCCCCccC-------------CCcchhhHHHHHHHHHHHhhc
Confidence            66666643  233             245899999999999988754

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.60  E-value=0.0057  Score=55.03  Aligned_cols=111  Identities=13%  Similarity=0.094  Sum_probs=66.7

Q ss_pred             EEEEEcCCChhhHHHHHHHhhc---c-CCCceEEEecCC--CCChhhhhhhC-------CCcceEEEeeCCCcccHHHHH
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEI---E-GKPYDVAATHHS--TPLPQLLLDAL-------PHSFVFFDVDLKSGSGFDAVA   71 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~---g-~~v~~v~~~~r~--~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~   71 (320)
                      +|+||||+|.||.+|+-.+..-   | ++...+++++..  .+.+....-.+       ...+. +..|  +    .+.+
T Consensus       125 ~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~-i~~~--~----~ea~  197 (452)
T cd05295         125 QVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGIS-VTTD--L----DVAF  197 (452)
T ss_pred             EEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcE-EEEC--C----HHHh
Confidence            7999999999999999988752   3 222556666663  33332211111       11222 1211  1    1334


Q ss_pred             HHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccC--ceEEEeec
Q 020880           72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE--NLLIHLST  128 (320)
Q Consensus        72 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~--~~~v~~Ss  128 (320)
                      +   ++|+||-+||....  ...+....++.|+.-. ..+.++..+...  .+++.+.|
T Consensus       198 ~---daDvvIitag~prk--~G~~R~DLL~~N~~If-k~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         198 K---DAHVIVLLDDFLIK--EGEDLEGCIRSRVAIC-QLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             C---CCCEEEECCCCCCC--cCCCHHHHHHHHHHHH-HHHHHHHHHhCCCCCeEEEEeC
Confidence            4   89999999997432  2345677788887665 366777766654  46666664

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.58  E-value=0.0057  Score=54.94  Aligned_cols=75  Identities=16%  Similarity=0.270  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ..++|+|.| +|-+|+.+++.|.+.|.  .+++...|+.+++..+.+.++. ..     ....+++.+.+.   ++|+||
T Consensus       180 ~~kkvlviG-aG~~a~~va~~L~~~g~--~~I~V~nRt~~ra~~La~~~~~-~~-----~~~~~~l~~~l~---~aDiVI  247 (414)
T PRK13940        180 SSKNVLIIG-AGQTGELLFRHVTALAP--KQIMLANRTIEKAQKITSAFRN-AS-----AHYLSELPQLIK---KADIII  247 (414)
T ss_pred             cCCEEEEEc-CcHHHHHHHHHHHHcCC--CEEEEECCCHHHHHHHHHHhcC-Ce-----EecHHHHHHHhc---cCCEEE
Confidence            367999999 59999999999999984  4788999998777777665431 11     111123333444   899999


Q ss_pred             ECCCccC
Q 020880           82 NCAALSV   88 (320)
Q Consensus        82 h~a~~~~   88 (320)
                      ++.+..+
T Consensus       248 ~aT~a~~  254 (414)
T PRK13940        248 AAVNVLE  254 (414)
T ss_pred             ECcCCCC
Confidence            9987643

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.57  E-value=0.0092  Score=46.47  Aligned_cols=55  Identities=25%  Similarity=0.343  Sum_probs=42.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+++|+|.|+++.+|..+++.|.++|   .+|+...|..                        +.+.+.+.   ++|+||
T Consensus        43 ~gk~vlViG~G~~~G~~~a~~L~~~g---~~V~v~~r~~------------------------~~l~~~l~---~aDiVI   92 (168)
T cd01080          43 AGKKVVVVGRSNIVGKPLAALLLNRN---ATVTVCHSKT------------------------KNLKEHTK---QADIVI   92 (168)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHhhCC---CEEEEEECCc------------------------hhHHHHHh---hCCEEE
Confidence            36899999987788999999999999   7787777652                        12334454   789999


Q ss_pred             ECCCc
Q 020880           82 NCAAL   86 (320)
Q Consensus        82 h~a~~   86 (320)
                      .+.+.
T Consensus        93 sat~~   97 (168)
T cd01080          93 VAVGK   97 (168)
T ss_pred             EcCCC
Confidence            88764

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.56  E-value=0.01  Score=50.24  Aligned_cols=71  Identities=21%  Similarity=0.237  Sum_probs=45.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhc--cCCCceEEEe-cCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEI--EGKPYDVAAT-HHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~--g~~v~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      |++++|.|.| .|.||+.+++.|.+.  +   +++..+ .|++++.+.+.+.++. ..       -..++++++.   ++
T Consensus         4 m~~irIGIIG-~G~IG~~~a~~L~~~~~~---~el~aV~dr~~~~a~~~a~~~g~-~~-------~~~~~eell~---~~   68 (271)
T PRK13302          4 RPELRVAIAG-LGAIGKAIAQALDRGLPG---LTLSAVAVRDPQRHADFIWGLRR-PP-------PVVPLDQLAT---HA   68 (271)
T ss_pred             CCeeEEEEEC-ccHHHHHHHHHHHhcCCC---eEEEEEECCCHHHHHHHHHhcCC-Cc-------ccCCHHHHhc---CC
Confidence            5567999999 799999999999864  5   777644 4554444444333220 00       1123555554   79


Q ss_pred             CEEEECCCc
Q 020880           78 DVVVNCAAL   86 (320)
Q Consensus        78 d~Vih~a~~   86 (320)
                      |+|+-|+..
T Consensus        69 D~Vvi~tp~   77 (271)
T PRK13302         69 DIVVEAAPA   77 (271)
T ss_pred             CEEEECCCc
Confidence            999998753

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.54  E-value=0.012  Score=50.14  Aligned_cols=79  Identities=22%  Similarity=0.198  Sum_probs=50.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++++|.| +|-.|++++-.|.+.|.  -+|+...|+.++++.+.+.+............+...+.+...   .+|+|||
T Consensus       127 ~k~vlilG-aGGaarAi~~aL~~~g~--~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~---~~divIN  200 (283)
T PRK14027        127 LDSVVQVG-AGGVGNAVAYALVTHGV--QKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIA---AADGVVN  200 (283)
T ss_pred             CCeEEEEC-CcHHHHHHHHHHHHCCC--CEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHh---hcCEEEE
Confidence            47899999 58899999999999884  368888998877777765432111100001112112222333   6899999


Q ss_pred             CCCcc
Q 020880           83 CAALS   87 (320)
Q Consensus        83 ~a~~~   87 (320)
                      +....
T Consensus       201 aTp~G  205 (283)
T PRK14027        201 ATPMG  205 (283)
T ss_pred             cCCCC
Confidence            87643

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.54  E-value=0.015  Score=50.53  Aligned_cols=114  Identities=15%  Similarity=0.113  Sum_probs=69.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh----hC---CCcceEEEeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD----AL---PHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~----~~---~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      ++||.|.| +|.+|+.++..|+..|.  .+|++.+.+++.+.....    ..   +.... +.+ -+|   ++ .+.   
T Consensus         6 ~~KI~IIG-aG~vG~~ia~~la~~gl--~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~-I~~-~~d---~~-~l~---   73 (321)
T PTZ00082          6 RRKISLIG-SGNIGGVMAYLIVLKNL--GDVVLFDIVKNIPQGKALDISHSNVIAGSNSK-VIG-TNN---YE-DIA---   73 (321)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCC--CeEEEEeCCCchhhHHHHHHHhhhhccCCCeE-EEE-CCC---HH-HhC---
Confidence            46899999 69999999999988884  378888888765421111    00   11112 121 022   32 334   


Q ss_pred             CCCEEEECCCccCcccc---ccCchhhhhccccccHHHHHhhhhhccCc-eEEEeech
Q 020880           76 QPDVVVNCAALSVPRVC---ENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTD  129 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~---~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~  129 (320)
                      ++|+||.+|+....+..   +.+....+..|+.-. ..+++.+.+...+ .+|..|..
T Consensus        74 ~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~-~~i~~~i~~~~p~a~~iv~sNP  130 (321)
T PTZ00082         74 GSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIM-DEVAEGIKKYCPNAFVIVITNP  130 (321)
T ss_pred             CCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHH-HHHHHHHHHHCCCeEEEEecCc
Confidence            89999999987432211   013445566676544 3777777776644 67777653

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.54  E-value=0.0063  Score=52.68  Aligned_cols=71  Identities=18%  Similarity=0.217  Sum_probs=51.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++|+|.|+ |-+|..+++.|...|.  .+|+...|++++...+...++.  .     ..+.+++.+.+.   ++|+||.
T Consensus       178 ~~~V~ViGa-G~iG~~~a~~L~~~g~--~~V~v~~r~~~ra~~la~~~g~--~-----~~~~~~~~~~l~---~aDvVi~  244 (311)
T cd05213         178 GKKVLVIGA-GEMGELAAKHLAAKGV--AEITIANRTYERAEELAKELGG--N-----AVPLDELLELLN---EADVVIS  244 (311)
T ss_pred             CCEEEEECc-HHHHHHHHHHHHHcCC--CEEEEEeCCHHHHHHHHHHcCC--e-----EEeHHHHHHHHh---cCCEEEE
Confidence            689999995 9999999999998663  5788888987776666665542  1     112233445554   7899999


Q ss_pred             CCCc
Q 020880           83 CAAL   86 (320)
Q Consensus        83 ~a~~   86 (320)
                      +.+.
T Consensus       245 at~~  248 (311)
T cd05213         245 ATGA  248 (311)
T ss_pred             CCCC
Confidence            9764

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.54  E-value=0.015  Score=50.61  Aligned_cols=101  Identities=17%  Similarity=0.017  Sum_probs=64.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh-CCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF-GQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~d~Vi   81 (320)
                      ..+|||+||+|-+|..+++.+...|   .+|+++.+++++.+.+.+ ++  .. ...|..+.+..+.+.+.. .++|+|+
T Consensus       144 g~~vlI~ga~g~vG~~aiqlA~~~G---~~vi~~~~s~~~~~~l~~-~G--a~-~vi~~~~~~~~~~v~~~~~~gvd~vl  216 (329)
T cd08294         144 GETVVVNGAAGAVGSLVGQIAKIKG---CKVIGCAGSDDKVAWLKE-LG--FD-AVFNYKTVSLEEALKEAAPDGIDCYF  216 (329)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHH-cC--CC-EEEeCCCccHHHHHHHHCCCCcEEEE
Confidence            4689999999999999999999999   889888887765554433 33  22 223444433222222111 3689999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhh
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV  131 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~v  131 (320)
                      ++.|..  .                 +...++.++..|  +++.+++...
T Consensus       217 d~~g~~--~-----------------~~~~~~~l~~~G--~iv~~g~~~~  245 (329)
T cd08294         217 DNVGGE--F-----------------SSTVLSHMNDFG--RVAVCGSIST  245 (329)
T ss_pred             ECCCHH--H-----------------HHHHHHhhccCC--EEEEEcchhc
Confidence            987631  0                 024555555555  7888876543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.53  E-value=0.017  Score=49.38  Aligned_cols=78  Identities=12%  Similarity=0.116  Sum_probs=47.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC---ChhhhhhhCCCcc--eEEEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP---LPQLLLDALPHSF--VFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~---~~~~~~~~~~~~~--~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      .++++|.|+.|- +++++-.|...|.  -+|+...|+.+   +++.+.+.+....  .....++.+.+.+.+.+   .++
T Consensus       124 ~k~vlvlGaGGa-arAi~~~l~~~g~--~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~---~~a  197 (288)
T PRK12749        124 GKTMVLLGAGGA-STAIGAQGAIEGL--KEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEAL---ASA  197 (288)
T ss_pred             CCEEEEECCcHH-HHHHHHHHHHCCC--CEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhc---ccC
Confidence            578999997555 9999999998884  47888899854   5555555443211  11112222211122222   378


Q ss_pred             CEEEECCCc
Q 020880           78 DVVVNCAAL   86 (320)
Q Consensus        78 d~Vih~a~~   86 (320)
                      |+|||+...
T Consensus       198 DivINaTp~  206 (288)
T PRK12749        198 DILTNGTKV  206 (288)
T ss_pred             CEEEECCCC
Confidence            999998754

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.51  E-value=0.018  Score=50.25  Aligned_cols=100  Identities=20%  Similarity=0.111  Sum_probs=65.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +.+++|+|++|-+|..+++.+...|   .+|+...++++....+ ....  .. ...|..+.+....+.+..  .++|.+
T Consensus       167 ~~~vlI~g~~~~iG~~~~~~~~~~g---~~v~~~~~~~~~~~~~-~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~d~~  239 (342)
T cd08266         167 GETVLVHGAGSGVGSAAIQIAKLFG---ATVIATAGSEDKLERA-KELG--AD-YVIDYRKEDFVREVRELTGKRGVDVV  239 (342)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHH-HHcC--CC-eEEecCChHHHHHHHHHhCCCCCcEE
Confidence            4689999999999999999999999   7888888876554433 2222  11 234555555444444322  268999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      +++++...                   +...++.++..|  +++.+|+..
T Consensus       240 i~~~g~~~-------------------~~~~~~~l~~~G--~~v~~~~~~  268 (342)
T cd08266         240 VEHVGAAT-------------------WEKSLKSLARGG--RLVTCGATT  268 (342)
T ss_pred             EECCcHHH-------------------HHHHHHHhhcCC--EEEEEecCC
Confidence            99987310                   024455555555  788888764

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.47  E-value=0.0057  Score=56.14  Aligned_cols=103  Identities=16%  Similarity=0.213  Sum_probs=60.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+++++|+|+ |-+|++++..|.+.|   ++|....|+.++.+.+.+..+.  .  ..++.+   +.+    +.++|+||
T Consensus       331 ~~k~vlIiGa-GgiG~aia~~L~~~G---~~V~i~~R~~~~~~~la~~~~~--~--~~~~~~---~~~----l~~~DiVI  395 (477)
T PRK09310        331 NNQHVAIVGA-GGAAKAIATTLARAG---AELLIFNRTKAHAEALASRCQG--K--AFPLES---LPE----LHRIDIII  395 (477)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhcc--c--eechhH---hcc----cCCCCEEE
Confidence            4679999995 899999999999999   7888888886666555443221  1  111211   111    23789999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccC
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE  120 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~  120 (320)
                      +|.....+- ...-+...++......-..+++.|++.|+
T Consensus       396 natP~g~~~-~~~l~~~v~D~~Y~P~~T~ll~~A~~~G~  433 (477)
T PRK09310        396 NCLPPSVTI-PKAFPPCVVDINTLPKHSPYTQYARSQGS  433 (477)
T ss_pred             EcCCCCCcc-hhHHhhhEEeccCCCCCCHHHHHHHHCcC
Confidence            997543221 00000112222222111157788888776

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.47  E-value=0.018  Score=49.84  Aligned_cols=115  Identities=16%  Similarity=0.166  Sum_probs=66.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEE-EeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFF-DVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |||.|.|+ |.+|+.++..|+.+|.. .+|.+.++++++.......+.....+. ...+.. .++++ +   .++|+||-
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~-~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~-~d~~~-l---~~aDiVii   73 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLA-SEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA-GDYAD-C---KGADVVVI   73 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCC-CEEEEEECCchhhhhHHHHHHccccccCCeEEee-CCHHH-h---CCCCEEEE
Confidence            47999996 99999999999998843 478888888765543111111000000 001110 12222 3   38999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      +++....  ...+.......|+.-. ..+.+.+.+.+.+ .++..+.
T Consensus        74 ta~~~~~--~~~~r~dl~~~n~~i~-~~~~~~l~~~~~~giiiv~tN  117 (308)
T cd05292          74 TAGANQK--PGETRLDLLKRNVAIF-KEIIPQILKYAPDAILLVVTN  117 (308)
T ss_pred             ccCCCCC--CCCCHHHHHHHHHHHH-HHHHHHHHHHCCCeEEEEecC
Confidence            9986422  2234455666676554 3666666655433 4444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.40  E-value=0.016  Score=52.69  Aligned_cols=77  Identities=18%  Similarity=0.201  Sum_probs=52.3

Q ss_pred             CCcEEEEEcC----------------CChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcc
Q 020880            2 SKKRVLVVGG----------------TGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS   65 (320)
Q Consensus         2 ~~~~ilItGa----------------tG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~   65 (320)
                      .+|+||||+|                ||-.|.+|++.+..+|   .+|+.+...-+..      .+.+++++.  +...+
T Consensus       255 ~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~G---A~VtlI~Gp~~~~------~p~~v~~i~--V~ta~  323 (475)
T PRK13982        255 AGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAG---AEVTLISGPVDLA------DPQGVKVIH--VESAR  323 (475)
T ss_pred             CCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCC---CcEEEEeCCcCCC------CCCCceEEE--ecCHH
Confidence            4689999975                7999999999999999   6777665432211      133455444  34444


Q ss_pred             cHHHHHHHhCCCCEEEECCCccCc
Q 020880           66 GFDAVALKFGQPDVVVNCAALSVP   89 (320)
Q Consensus        66 ~~~~~~~~~~~~d~Vih~a~~~~~   89 (320)
                      ++.+.+...-..|++|++|+....
T Consensus       324 eM~~av~~~~~~Di~I~aAAVaDy  347 (475)
T PRK13982        324 QMLAAVEAALPADIAIFAAAVADW  347 (475)
T ss_pred             HHHHHHHhhCCCCEEEEeccccce
Confidence            555545432258999999998754

>PF10100 DUF2338: Uncharacterized protein conserved in bacteria (DUF2338); InterPro: IPR016935 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=96.38  E-value=0.062  Score=47.07  Aligned_cols=135  Identities=20%  Similarity=0.254  Sum_probs=84.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcc--------cHHHHHH--
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS--------GFDAVAL--   72 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~--------~~~~~~~--   72 (320)
                      |.+|||.| ||-++-.|+.-|...+.  .+|-...|.+.+.+.+.+.+...-..+...+.+..        .++.+++  
T Consensus         1 m~~VLI~G-tGPvAiQLAv~lk~~~~--~~vGi~~R~S~rSq~f~~aL~~~~~~~~v~vqn~~h~~l~G~~~id~~~~~~   77 (429)
T PF10100_consen    1 MGNVLIVG-TGPVAIQLAVILKKHGN--CRVGIVGRESVRSQRFFEALARSDGLFEVSVQNEQHQALSGECTIDHVFQDY   77 (429)
T ss_pred             CCceEEEc-CCHHHHHHHHHHHhccC--ceeeeecCcchhHHHHHHHHHhCCCEEEEeecchhhhhhcCeEEhhHhhcCH
Confidence            57899999 99999999998887764  57888888877777777766443333555544432        1222222  


Q ss_pred             --HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhh---hhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           73 --KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSF---TENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        73 --~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~---~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                        ..+++|.+|-+.-           ..++        ..+++..   .-.++|++|.+|...                 
T Consensus        78 ~~i~g~WdtlILavt-----------aDAY--------~~VL~ql~~~~L~~vk~iVLvSPtf-----------------  121 (429)
T PF10100_consen   78 EEIEGEWDTLILAVT-----------ADAY--------LDVLQQLPWEVLKRVKSIVLVSPTF-----------------  121 (429)
T ss_pred             HHhcccccEEEEEec-----------hHHH--------HHHHHhcCHHHHhhCCEEEEECccc-----------------
Confidence              1146777776531           1111        1333333   335678999999753                 


Q ss_pred             cchHHHHHHHHHHHHHHHcCCeeEEeecccccCC
Q 020880          148 VNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ  181 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~~ilR~~~v~G~~  181 (320)
                           -|-..++.++.+.+...-++-+++.||..
T Consensus       122 -----GS~~lv~~~l~~~~~~~EVISFStY~gdT  150 (429)
T PF10100_consen  122 -----GSHLLVKGFLNDLGPDAEVISFSTYYGDT  150 (429)
T ss_pred             -----chHHHHHHHHHhcCCCceEEEeecccccc
Confidence                 23345556666666667777777777754

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.36  E-value=0.0073  Score=54.85  Aligned_cols=67  Identities=21%  Similarity=0.280  Sum_probs=46.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|.|.||+|.+|+.+++.|.+.|   ++|.+..|+++.........+  +.     ..  .+..+.+.   ++|+||-+
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G---~~V~v~~r~~~~~~~~a~~~g--v~-----~~--~~~~e~~~---~aDvVIla   65 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKG---FEVIVTGRDPKKGKEVAKELG--VE-----YA--NDNIDAAK---DADIVIIS   65 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCC---CEEEEEECChHHHHHHHHHcC--Ce-----ec--cCHHHHhc---cCCEEEEe
Confidence            479999999999999999999999   788888888655433333221  11     11  12333444   78998877


Q ss_pred             CC
Q 020880           84 AA   85 (320)
Q Consensus        84 a~   85 (320)
                      ..
T Consensus        66 vp   67 (437)
T PRK08655         66 VP   67 (437)
T ss_pred             cC
Confidence            53

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.34  E-value=0.0082  Score=51.53  Aligned_cols=67  Identities=19%  Similarity=0.216  Sum_probs=46.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++++|+|. |-+|+.++..|...|   .+|+...|+++..... ..++  ..++  +   .+.+.+.+.   ++|+||+
T Consensus       152 g~kvlViG~-G~iG~~~a~~L~~~G---a~V~v~~r~~~~~~~~-~~~G--~~~~--~---~~~l~~~l~---~aDiVI~  216 (296)
T PRK08306        152 GSNVLVLGF-GRTGMTLARTLKALG---ANVTVGARKSAHLARI-TEMG--LSPF--H---LSELAEEVG---KIDIIFN  216 (296)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCHHHHHHH-HHcC--Ceee--c---HHHHHHHhC---CCCEEEE
Confidence            689999995 889999999999999   8899998886543322 2221  2221  1   123444444   8999999


Q ss_pred             CC
Q 020880           83 CA   84 (320)
Q Consensus        83 ~a   84 (320)
                      ++
T Consensus       217 t~  218 (296)
T PRK08306        217 TI  218 (296)
T ss_pred             CC
Confidence            85

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=96.33  E-value=0.02  Score=48.78  Aligned_cols=99  Identities=21%  Similarity=0.271  Sum_probs=60.4

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC--hhhhhhhCCCcceEEEeeCCCcccHHHHHHH--hCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL--PQLLLDALPHSFVFFDVDLKSGSGFDAVALK--FGQ   76 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~   76 (320)
                      |++.+|.|.| +|.||+.++..+++..+  .++.+++.....  .....+.++  +...      .++++.+++.  +.+
T Consensus         2 m~klrVAIIG-tG~IGt~hm~~l~~~~~--velvAVvdid~es~gla~A~~~G--i~~~------~~~ie~LL~~~~~~d   70 (302)
T PRK08300          2 MSKLKVAIIG-SGNIGTDLMIKILRSEH--LEPGAMVGIDPESDGLARARRLG--VATS------AEGIDGLLAMPEFDD   70 (302)
T ss_pred             CCCCeEEEEc-CcHHHHHHHHHHhcCCC--cEEEEEEeCChhhHHHHHHHHcC--CCcc------cCCHHHHHhCcCCCC
Confidence            4467999999 99999998888876432  677766544322  212222221  2111      1335556653  247


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      +|+||.+++....                   ......+.+.|+ ++|-.|+++
T Consensus        71 IDiVf~AT~a~~H-------------------~e~a~~a~eaGk-~VID~sPA~  104 (302)
T PRK08300         71 IDIVFDATSAGAH-------------------VRHAAKLREAGI-RAIDLTPAA  104 (302)
T ss_pred             CCEEEECCCHHHH-------------------HHHHHHHHHcCC-eEEECCccc
Confidence            9999988753210                   256667777786 777777776

>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated

Probab=96.33  E-value=0.058  Score=49.45  Aligned_cols=75  Identities=12%  Similarity=0.136  Sum_probs=48.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEe-------eCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV-------DLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~   75 (320)
                      ||||||.| .|.+|..+++.+.+.|   ++++.+...++....... +.+  +.+..       +..|.+.+.++++.. 
T Consensus         2 ~k~iLi~g-~g~~a~~i~~aa~~~G---~~vv~~~~~~d~~a~~~~-~ad--~~~~~~~~~~~~~y~d~~~l~~~a~~~-   73 (451)
T PRK08591          2 FDKILIAN-RGEIALRIIRACKELG---IKTVAVHSTADRDALHVQ-LAD--EAVCIGPAPSKKSYLNIPAIISAAEIT-   73 (451)
T ss_pred             cceEEEEC-CCHHHHHHHHHHHHcC---CeEEEEcChhhccCCCHh-HCC--EEEEeCCCCcccccCCHHHHHHHHHHh-
Confidence            68999998 7999999999999999   777777554332111000 011  11221       344555566665554 


Q ss_pred             CCCEEEECCC
Q 020880           76 QPDVVVNCAA   85 (320)
Q Consensus        76 ~~d~Vih~a~   85 (320)
                      ++|+|+-..+
T Consensus        74 ~id~I~p~~~   83 (451)
T PRK08591         74 GADAIHPGYG   83 (451)
T ss_pred             CCCEEEECCC
Confidence            8999987653

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.32  E-value=0.013  Score=51.89  Aligned_cols=116  Identities=16%  Similarity=0.098  Sum_probs=67.5

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCC----ceEEEe--cCCCCChhhhhhhCCCcc-eEE-EeeCCCcccHHHHHHHhCC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKP----YDVAAT--HHSTPLPQLLLDALPHSF-VFF-DVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v----~~v~~~--~r~~~~~~~~~~~~~~~~-~~~-~~Dl~d~~~~~~~~~~~~~   76 (320)
                      ||.|+||+|.+|++++-.|...+..-    ..+.++  +++.+++......+.+.. .+. ...++. ... +.++   +
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~-~~y-~~~k---d  120 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI-DPY-EVFE---D  120 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec-CCH-HHhC---C
Confidence            89999999999999999998887410    123333  566555443322221111 000 001111 112 2233   8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-C-ceEEEeec
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-E-NLLIHLST  128 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~-~~~v~~Ss  128 (320)
                      +|+||-+||....  ..++..+.+..|+.-. ..+.....+.. . .++|.+|.
T Consensus       121 aDIVVitAG~prk--pg~tR~dll~~N~~I~-k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       121 ADWALLIGAKPRG--PGMERADLLDINGQIF-ADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             CCEEEECCCCCCC--CCCCHHHHHHHHHHHH-HHHHHHHHHhCCCCeEEEEcCC
Confidence            9999999997432  2346677888887665 47777776632 2 26777775

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.31  E-value=0.013  Score=51.96  Aligned_cols=74  Identities=11%  Similarity=0.181  Sum_probs=53.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ..+|+|+|+ |-+|...++.|...|   .+|....|+.++.+.+...++..   +..+..+.+.+.+.+.   ++|+||+
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lG---a~V~v~d~~~~~~~~l~~~~g~~---v~~~~~~~~~l~~~l~---~aDvVI~  236 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLG---ATVTILDINIDRLRQLDAEFGGR---IHTRYSNAYEIEDAVK---RADLLIG  236 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCC---CeEEEEECCHHHHHHHHHhcCce---eEeccCCHHHHHHHHc---cCCEEEE
Confidence            357999985 999999999999999   78888888866555444433321   2334555555666655   8999999


Q ss_pred             CCCc
Q 020880           83 CAAL   86 (320)
Q Consensus        83 ~a~~   86 (320)
                      ++..
T Consensus       237 a~~~  240 (370)
T TIGR00518       237 AVLI  240 (370)
T ss_pred             cccc
Confidence            8754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK06849 hypothetical protein; Provisional

Probab=96.31  E-value=0.016  Score=52.01  Aligned_cols=77  Identities=13%  Similarity=0.150  Sum_probs=49.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEe--eCCCc----ccHHHHHHHhC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV--DLKSG----SGFDAVALKFG   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~--Dl~d~----~~~~~~~~~~~   75 (320)
                      ++|+|||||+...+|-.+++.|.+.|   ++|++.+..+.......... ..  ++..  .-.|+    +.+.+++++ +
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G---~~Vi~~d~~~~~~~~~s~~~-d~--~~~~p~p~~d~~~~~~~L~~i~~~-~   75 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAG---HTVILADSLKYPLSRFSRAV-DG--FYTIPSPRWDPDAYIQALLSIVQR-E   75 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCchHHHHHHHhh-hh--eEEeCCCCCCHHHHHHHHHHHHHH-c
Confidence            36899999999999999999999999   88988877754332211111 11  2222  12232    234444454 3


Q ss_pred             CCCEEEECCC
Q 020880           76 QPDVVVNCAA   85 (320)
Q Consensus        76 ~~d~Vih~a~   85 (320)
                      ++|.||-+..
T Consensus        76 ~id~vIP~~e   85 (389)
T PRK06849         76 NIDLLIPTCE   85 (389)
T ss_pred             CCCEEEECCh
Confidence            7999998764

>PLN00203 glutamyl-tRNA reductase

Probab=96.31  E-value=0.011  Score=54.67  Aligned_cols=75  Identities=24%  Similarity=0.313  Sum_probs=52.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++|+|.|+ |-+|..+++.|...|.  .+|++..|+.++...+...++ .......++   +++.+.+.   ++|+||.
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~--~~V~V~nRs~era~~La~~~~-g~~i~~~~~---~dl~~al~---~aDVVIs  335 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGC--TKMVVVNRSEERVAALREEFP-DVEIIYKPL---DEMLACAA---EADVVFT  335 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCC--CeEEEEeCCHHHHHHHHHHhC-CCceEeecH---hhHHHHHh---cCCEEEE
Confidence            589999996 9999999999999983  368899999887777766543 121111122   23444454   8999998


Q ss_pred             CCCcc
Q 020880           83 CAALS   87 (320)
Q Consensus        83 ~a~~~   87 (320)
                      +.+..
T Consensus       336 AT~s~  340 (519)
T PLN00203        336 STSSE  340 (519)
T ss_pred             ccCCC
Confidence            87643

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.30  E-value=0.026  Score=48.73  Aligned_cols=76  Identities=22%  Similarity=0.161  Sum_probs=52.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      .++++|+|++|-+|..+++.+...|   .+|+.+.++++..+.+. .++  .. ...|..+.+....+.+..  .++|.|
T Consensus       145 g~~vlI~g~~~~~g~~~~~~a~~~g---~~v~~~~~~~~~~~~~~-~~g--~~-~~~~~~~~~~~~~~~~~~~~~~~d~v  217 (325)
T cd08253         145 GETVLVHGGSGAVGHAAVQLARWAG---ARVIATASSAEGAELVR-QAG--AD-AVFNYRAEDLADRILAATAGQGVDVI  217 (325)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHH-HcC--CC-EEEeCCCcCHHHHHHHHcCCCceEEE
Confidence            4789999999999999999999999   88998888765544442 222  22 234555544444433222  268999


Q ss_pred             EECCC
Q 020880           81 VNCAA   85 (320)
Q Consensus        81 ih~a~   85 (320)
                      +++++
T Consensus       218 i~~~~  222 (325)
T cd08253         218 IEVLA  222 (325)
T ss_pred             EECCc
Confidence            99876

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=96.30  E-value=0.016  Score=48.76  Aligned_cols=71  Identities=21%  Similarity=0.388  Sum_probs=56.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .+||+++| +|-+|..++-++..-|   .+|++++|=...+.-....     .-+..|+.|.+.++.+++.. ++|+||-
T Consensus        12 a~kvmLLG-SGELGKEvaIe~QRLG---~eViAVDrY~~APAmqVAh-----rs~Vi~MlD~~al~avv~re-kPd~IVp   81 (394)
T COG0027          12 ATKVMLLG-SGELGKEVAIEAQRLG---VEVIAVDRYANAPAMQVAH-----RSYVIDMLDGDALRAVVERE-KPDYIVP   81 (394)
T ss_pred             CeEEEEec-CCccchHHHHHHHhcC---CEEEEecCcCCChhhhhhh-----heeeeeccCHHHHHHHHHhh-CCCeeee
Confidence            36899999 8999999999999999   8999999976543322111     12678999999999999875 9999985


Q ss_pred             C
Q 020880           83 C   83 (320)
Q Consensus        83 ~   83 (320)
                      -
T Consensus        82 E   82 (394)
T COG0027          82 E   82 (394)
T ss_pred             h
Confidence            3

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.29  E-value=0.013  Score=52.25  Aligned_cols=67  Identities=22%  Similarity=0.306  Sum_probs=51.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ||+|+|.|+ |.+|..++..+.+.|   ++|+.++.+++.......     -.++.+|..|.+.+.++++   .+|+|.
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG---~~v~~~d~~~~~pa~~~a-----d~~~~~~~~D~~~l~~~a~---~~dvit   68 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLG---YKVIVLDPDPDSPAAQVA-----DEVIVADYDDVAALRELAE---QCDVIT   68 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC---CEEEEEeCCCCCchhHhC-----ceEEecCCCCHHHHHHHHh---cCCEEE
Confidence            578999995 899999999999999   889988877544322111     1246788999998888887   789874

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.28  E-value=0.02  Score=47.69  Aligned_cols=95  Identities=20%  Similarity=0.191  Sum_probs=63.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|||+|||+= |+.|++.|.++|   + |...+-.+- ...+............+-+.+.+.+.++++.. +++.||..
T Consensus         1 m~ILvlgGTtE-~r~la~~L~~~g---~-v~~sv~t~~-g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~-~i~~vIDA   73 (249)
T PF02571_consen    1 MKILVLGGTTE-GRKLAERLAEAG---Y-VIVSVATSY-GGELLKPELPGLEVRVGRLGDEEGLAEFLREN-GIDAVIDA   73 (249)
T ss_pred             CEEEEEechHH-HHHHHHHHHhcC---C-EEEEEEhhh-hHhhhccccCCceEEECCCCCHHHHHHHHHhC-CCcEEEEC
Confidence            68999999874 899999999999   5 333222221 11222111134566777887889999998774 99999986


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCc
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN  121 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~  121 (320)
                      .=++         .    ..+.   .++.++|++.|++
T Consensus        74 THPf---------A----~~is---~na~~a~~~~~ip   95 (249)
T PF02571_consen   74 THPF---------A----AEIS---QNAIEACRELGIP   95 (249)
T ss_pred             CCch---------H----HHHH---HHHHHHHhhcCcc
Confidence            4211         1    1111   4889999999884

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.28  E-value=0.012  Score=52.30  Aligned_cols=34  Identities=29%  Similarity=0.493  Sum_probs=31.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      +++|.|.||+|.+|+.++..|.+.|   ++|.+..|+
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G---~~V~~~d~~  131 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSG---YQVRILEQD  131 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCC---CeEEEeCCC
Confidence            5789999999999999999999999   788888875

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.27  E-value=0.027  Score=50.22  Aligned_cols=105  Identities=17%  Similarity=0.111  Sum_probs=62.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC-------------------CCChhhhhhh---CCCcce--EEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-------------------TPLPQLLLDA---LPHSFV--FFD   58 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~-------------------~~~~~~~~~~---~~~~~~--~~~   58 (320)
                      .++|+|.| .|-+|+++++.|...|.  -+++..+++                   ..+++...+.   ..+.+.  .+.
T Consensus       135 ~~~VlvvG-~GG~Gs~ia~~La~~Gv--g~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  211 (376)
T PRK08762        135 EARVLLIG-AGGLGSPAALYLAAAGV--GTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ  211 (376)
T ss_pred             cCcEEEEC-CCHHHHHHHHHHHHcCC--CeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            56899998 58899999999999994  356666664                   1222222221   122333  222


Q ss_pred             eeCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        59 ~Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      ..+. .+.+.++++   ++|+||++....         ..-         ..+-++|.+.++ ++|+.+....+|
T Consensus       212 ~~~~-~~~~~~~~~---~~D~Vv~~~d~~---------~~r---------~~ln~~~~~~~i-p~i~~~~~g~~g  263 (376)
T PRK08762        212 ERVT-SDNVEALLQ---DVDVVVDGADNF---------PTR---------YLLNDACVKLGK-PLVYGAVFRFEG  263 (376)
T ss_pred             ccCC-hHHHHHHHh---CCCEEEECCCCH---------HHH---------HHHHHHHHHcCC-CEEEEEeccCEE
Confidence            2332 233445555   889999886421         110         245667778887 888887655444

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.27  E-value=0.0079  Score=54.49  Aligned_cols=72  Identities=17%  Similarity=0.279  Sum_probs=50.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++|+|.| +|-+|..+++.|...|.  .+|+...|+.++...+...++.       +..+.+++.+.+.   ++|+||.
T Consensus       182 ~~~vlViG-aG~iG~~~a~~L~~~G~--~~V~v~~r~~~ra~~la~~~g~-------~~~~~~~~~~~l~---~aDvVI~  248 (423)
T PRK00045        182 GKKVLVIG-AGEMGELVAKHLAEKGV--RKITVANRTLERAEELAEEFGG-------EAIPLDELPEALA---EADIVIS  248 (423)
T ss_pred             CCEEEEEC-chHHHHHHHHHHHHCCC--CeEEEEeCCHHHHHHHHHHcCC-------cEeeHHHHHHHhc---cCCEEEE
Confidence            57999999 59999999999998883  2788888987666656555431       1112233444444   8999999


Q ss_pred             CCCcc
Q 020880           83 CAALS   87 (320)
Q Consensus        83 ~a~~~   87 (320)
                      +.+..
T Consensus       249 aT~s~  253 (423)
T PRK00045        249 STGAP  253 (423)
T ss_pred             CCCCC
Confidence            87643

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.24  E-value=0.034  Score=46.71  Aligned_cols=105  Identities=12%  Similarity=0.110  Sum_probs=59.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-------------------Chhhhh---hhCCCcceEEEe
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-------------------LPQLLL---DALPHSFVFFDV   59 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-------------------~~~~~~---~~~~~~~~~~~~   59 (320)
                      ...+|+|.| .|-+|+++++.|...|-  -++++.+.+.-                   +.+.+.   ....+.++....
T Consensus        29 ~~s~VlVvG-~GGVGs~vae~Lar~GV--g~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i  105 (268)
T PRK15116         29 ADAHICVVG-IGGVGSWAAEALARTGI--GAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV  105 (268)
T ss_pred             cCCCEEEEC-cCHHHHHHHHHHHHcCC--CEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence            356899999 79999999999999983  23444433210                   000111   111223322221


Q ss_pred             -eCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           60 -DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        60 -Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                       +..+++...+++.  .++|+||.+......                 . ..+.+.|++.++ ++|..+++.
T Consensus       106 ~~~i~~e~~~~ll~--~~~D~VIdaiD~~~~-----------------k-~~L~~~c~~~~i-p~I~~gGag  156 (268)
T PRK15116        106 DDFITPDNVAEYMS--AGFSYVIDAIDSVRP-----------------K-AALIAYCRRNKI-PLVTTGGAG  156 (268)
T ss_pred             ecccChhhHHHHhc--CCCCEEEEcCCCHHH-----------------H-HHHHHHHHHcCC-CEEEECCcc
Confidence             2223444444443  268999987642110                 0 367888888887 777665554

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.23  E-value=0.017  Score=50.60  Aligned_cols=100  Identities=15%  Similarity=0.060  Sum_probs=56.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHh-hccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLS-EIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~-~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |+|.|.||||.+|+.+++.|. ++...+.+++.+..+.+.....  .+. ......-++.+.+    .+.   ++|++|-
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~--~f~-~~~~~v~~~~~~~----~~~---~vDivff   70 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAP--SFG-GTTGTLQDAFDID----ALK---ALDIIIT   70 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcC--CCC-CCcceEEcCcccc----ccc---CCCEEEE
Confidence            479999999999999999999 6664433344443332221111  111 1111233443321    133   7999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeechhhh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTDQVY  132 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~~vy  132 (320)
                      +++..   .+                ..+...+++.|.. .+|=-||+.-+
T Consensus        71 a~g~~---~s----------------~~~~p~~~~aG~~~~VIDnSSa~Rm  102 (366)
T TIGR01745        71 CQGGD---YT----------------NEIYPKLRESGWQGYWIDAASSLRM  102 (366)
T ss_pred             cCCHH---HH----------------HHHHHHHHhCCCCeEEEECChhhhc
Confidence            88632   00                3677777888842 45555555443

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.21  E-value=0.013  Score=43.24  Aligned_cols=80  Identities=14%  Similarity=0.211  Sum_probs=45.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEec-CCCCChhhhhhhCC-----------CcceEEEeeCCCcccHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLDALP-----------HSFVFFDVDLKSGSGFDAV   70 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~-r~~~~~~~~~~~~~-----------~~~~~~~~Dl~d~~~~~~~   70 (320)
                      .++|-|.|+ |-+|++|++.|.+.|   +.|.++. |+....++.....+           .....+..-+.|. .+.++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag---~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~v   84 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAG---HEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEV   84 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTT---SEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCC---CeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHH
Confidence            578999995 999999999999999   7777664 54433333322221           2233444444453 45555


Q ss_pred             HHHhC------CCCEEEECCCcc
Q 020880           71 ALKFG------QPDVVVNCAALS   87 (320)
Q Consensus        71 ~~~~~------~~d~Vih~a~~~   87 (320)
                      .+.+.      .=.+|+||.|..
T Consensus        85 a~~La~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   85 AEQLAQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HHHHHCC--S-TT-EEEES-SS-
T ss_pred             HHHHHHhccCCCCcEEEECCCCC
Confidence            54431      225899998864

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.21  E-value=0.011  Score=53.50  Aligned_cols=71  Identities=14%  Similarity=0.189  Sum_probs=50.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++|+|.|+ |-+|..+++.|...|.  .+|++..|+.++...+...++.  ..+  +   .+++.+.+.   ++|+||.
T Consensus       180 ~~~VlViGa-G~iG~~~a~~L~~~G~--~~V~v~~rs~~ra~~la~~~g~--~~i--~---~~~l~~~l~---~aDvVi~  246 (417)
T TIGR01035       180 GKKALLIGA-GEMGELVAKHLLRKGV--GKILIANRTYERAEDLAKELGG--EAV--K---FEDLEEYLA---EADIVIS  246 (417)
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHcCC--eEe--e---HHHHHHHHh---hCCEEEE
Confidence            579999995 9999999999999884  4788888887666555554432  111  1   123445554   8999999


Q ss_pred             CCCc
Q 020880           83 CAAL   86 (320)
Q Consensus        83 ~a~~   86 (320)
                      +.+.
T Consensus       247 aT~s  250 (417)
T TIGR01035       247 STGA  250 (417)
T ss_pred             CCCC
Confidence            8764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.20  E-value=0.028  Score=48.52  Aligned_cols=115  Identities=22%  Similarity=0.276  Sum_probs=66.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhh-hhhCCCc-ceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL-LDALPHS-FVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~-~~~~~~~-~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      |||.|.|+ |++|+.++..|...|.  .+|+..+..++..... .+..... .......++-..++.+ +   .++|+||
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~--~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~---~~aDiVI   74 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKEL--ADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-T---ANSDIVV   74 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCC--CeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-h---CCCCEEE
Confidence            58999995 9999999999999884  2788888865543311 1111100 0000111211122333 3   3899999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccC-ceEEEeec
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE-NLLIHLST  128 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~-~~~v~~Ss  128 (320)
                      -++|....  ...+....+..|+.-. ..+++...+... ..+|.+|.
T Consensus        75 itag~p~~--~~~sR~~l~~~N~~iv-~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        75 ITAGLPRK--PGMSREDLLSMNAGIV-REVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             EcCCCCCC--cCCCHHHHHHHHHHHH-HHHHHHHHHHCCCeEEEEecC
Confidence            99986422  1234456667777655 366666666543 25666665

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.20  E-value=0.019  Score=51.61  Aligned_cols=71  Identities=24%  Similarity=0.401  Sum_probs=52.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|+|+|+| +|..|..++..+.+.|   ++|+.+..++........   +  .++..|..|.+.+.++++.. ++|.|+-
T Consensus        12 ~~~ilIiG-~g~~~~~~~~a~~~~G---~~v~~~~~~~~~~~~~~a---d--~~~~~~~~d~~~l~~~~~~~-~id~vi~   81 (395)
T PRK09288         12 ATRVMLLG-SGELGKEVAIEAQRLG---VEVIAVDRYANAPAMQVA---H--RSHVIDMLDGDALRAVIERE-KPDYIVP   81 (395)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEeCCCCCchHHhh---h--heEECCCCCHHHHHHHHHHh-CCCEEEE
Confidence            57999999 5899999999999999   888888777543222111   1  23677888888888877764 8999886


Q ss_pred             C
Q 020880           83 C   83 (320)
Q Consensus        83 ~   83 (320)
                      .
T Consensus        82 ~   82 (395)
T PRK09288         82 E   82 (395)
T ss_pred             e
Confidence            4

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.19  E-value=0.019  Score=48.62  Aligned_cols=109  Identities=14%  Similarity=0.152  Sum_probs=67.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEE-eeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD-VDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .++++|.| +|-.+++++..|++.|.  .+|+...|+.++.+++.+.++.....+. .++.+.+.    .+   ..|+||
T Consensus       126 ~~~vlilG-AGGAarAv~~aL~~~g~--~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~----~~---~~dliI  195 (283)
T COG0169         126 GKRVLILG-AGGAARAVAFALAEAGA--KRITVVNRTRERAEELADLFGELGAAVEAAALADLEG----LE---EADLLI  195 (283)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHcCC--CEEEEEeCCHHHHHHHHHHhhhccccccccccccccc----cc---ccCEEE
Confidence            47899999 58889999999999994  4799999999888888776643221111 22222111    11   479999


Q ss_pred             ECCCccCcccccc---------CchhhhhccccccHHHHHhhhhhccCc
Q 020880           82 NCAALSVPRVCEN---------DPDSAMSINVPSSLVNWLSSFTENKEN  121 (320)
Q Consensus        82 h~a~~~~~~~~~~---------~~~~~~~~n~~~~~~~~l~~~~~~~~~  121 (320)
                      |+....-......         .....++++....-..+++.|++.|++
T Consensus       196 NaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~  244 (283)
T COG0169         196 NATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK  244 (283)
T ss_pred             ECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence            9986643221000         011222333332112789999998874

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=96.17  E-value=0.026  Score=49.49  Aligned_cols=101  Identities=12%  Similarity=0.126  Sum_probs=57.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhhhCCCc--------ce-EEEeeCCCcccHHHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLDALPHS--------FV-FFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~~~~~~--------~~-~~~~Dl~d~~~~~~~~~   72 (320)
                      |+||.|.|+ |-||+.+++.+.++..  +++.+....... ...+....+-.        .. +-..++.-.....+++.
T Consensus         1 ~ikVaI~G~-GrIGr~va~al~~~~d--~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~   77 (341)
T PRK04207          1 MIKVGVNGY-GTIGKRVADAVAAQPD--MELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLE   77 (341)
T ss_pred             CeEEEEECC-CHHHHHHHHHHhcCCC--cEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhc
Confidence            578999998 9999999998886533  788877764321 11111211100        00 00001100112334444


Q ss_pred             HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           73 KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                         ++|+||-|++....                   ...++.+.+.|+ ++|..|+.
T Consensus        78 ---~vDVVIdaT~~~~~-------------------~e~a~~~~~aGk-~VI~~~~~  111 (341)
T PRK04207         78 ---KADIVVDATPGGVG-------------------AKNKELYEKAGV-KAIFQGGE  111 (341)
T ss_pred             ---cCCEEEECCCchhh-------------------HHHHHHHHHCCC-EEEEcCCC
Confidence               79999999754211                   256667777784 77777764

>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.17  E-value=0.018  Score=49.31  Aligned_cols=101  Identities=12%  Similarity=0.006  Sum_probs=60.3

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC-CCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |.-++|.| ||||-+|+.+.+.|-+++..+-+++.+... .+..+.+  .++ +-++..-++++.+     ++   ++|+
T Consensus         1 ~~~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~i--~f~-g~~~~V~~l~~~~-----f~---~vDi   68 (322)
T PRK06901          1 MATLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEEQGI--RFN-NKAVEQIAPEEVE-----WA---DFNY   68 (322)
T ss_pred             CCcceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCCCEE--EEC-CEEEEEEECCccC-----cc---cCCE
Confidence            55678999 999999999999999998554334433332 1111110  111 1122333444321     33   8999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcc
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG  134 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~  134 (320)
                      +|- |+..   .+                ..+...+.+.|+ .+|=-||++-+.+
T Consensus        69 a~f-ag~~---~s----------------~~~ap~a~~aG~-~VIDnSsa~Rmd~  102 (322)
T PRK06901         69 VFF-AGKM---AQ----------------AEHLAQAAEAGC-IVIDLYGICAALA  102 (322)
T ss_pred             EEE-cCHH---HH----------------HHHHHHHHHCCC-EEEECChHhhCCC
Confidence            988 6532   00                367777788887 6776777765543

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.15  E-value=0.04  Score=44.84  Aligned_cols=106  Identities=14%  Similarity=0.161  Sum_probs=60.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC---C---------------Chhh---hhhhCCCc--ceEEEe
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST---P---------------LPQL---LLDALPHS--FVFFDV   59 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~---~---------------~~~~---~~~~~~~~--~~~~~~   59 (320)
                      ..+|+|.| .|-+|+.+++.|...|.  -+++..+.+.   +               +.+.   .+..+.+.  ++.+..
T Consensus        28 ~~~V~ViG-~GglGs~ia~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         28 KAKVGIAG-AGGLGSNIAVALARSGV--GNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHHcCC--CeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            56899999 69999999999999984  3455555541   1               1111   11111222  233333


Q ss_pred             eCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeechhhhcc
Q 020880           60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTDQVYEG  134 (320)
Q Consensus        60 Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~~vy~~  134 (320)
                      .+++ +.+.+.++   ++|+||.|..         +++..         ..+.+.|.+. ++ ++|+.+...-|+.
T Consensus       105 ~i~~-~~~~~~~~---~~DvVI~a~D---------~~~~r---------~~l~~~~~~~~~~-p~I~~~~~~~~~~  157 (212)
T PRK08644        105 KIDE-DNIEELFK---DCDIVVEAFD---------NAETK---------AMLVETVLEHPGK-KLVAASGMAGYGD  157 (212)
T ss_pred             ecCH-HHHHHHHc---CCCEEEECCC---------CHHHH---------HHHHHHHHHhCCC-CEEEeehhhccCC
Confidence            4433 33444444   7899998742         11110         2566777776 65 7888876655553

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.15  E-value=0.017  Score=40.40  Aligned_cols=68  Identities=22%  Similarity=0.259  Sum_probs=47.1

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEe-cCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      ||.|.| +|-+|++|++.|++.|....+|... .|++++..++.+.++  +.....      +..++++   .+|+||-+
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~--~~~~~~------~~~~~~~---~advvila   68 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG--VQATAD------DNEEAAQ---EADVVILA   68 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT--TEEESE------EHHHHHH---HTSEEEE-
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc--cccccC------ChHHhhc---cCCEEEEE
Confidence            577886 8999999999999998433677744 888888777777654  221111      2345666   68999987


Q ss_pred             C
Q 020880           84 A   84 (320)
Q Consensus        84 a   84 (320)
                      .
T Consensus        69 v   69 (96)
T PF03807_consen   69 V   69 (96)
T ss_dssp             S
T ss_pred             E
Confidence            5

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.10  E-value=0.049  Score=45.40  Aligned_cols=105  Identities=20%  Similarity=0.177  Sum_probs=59.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-------------------CChh---hhhhhCCCcc--eEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-------------------PLPQ---LLLDALPHSF--VFFD   58 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-------------------~~~~---~~~~~~~~~~--~~~~   58 (320)
                      ..+|+|.|+ |-+|+.+++.|...|.  -+++.++.+.                   .+.+   +.+..+.+.+  +.+.
T Consensus        32 ~~~VliiG~-GglGs~va~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~  108 (245)
T PRK05690         32 AARVLVVGL-GGLGCAASQYLAAAGV--GTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN  108 (245)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            579999996 9999999999999984  2444443321                   1111   1111222233  3333


Q ss_pred             eeCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        59 ~Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      ..++ .+.+.++++   ++|+||.+...         ++..         ..+-+.|.+.++ ++|+.++...+|
T Consensus       109 ~~i~-~~~~~~~~~---~~DiVi~~~D~---------~~~r---------~~ln~~~~~~~i-p~v~~~~~g~~G  160 (245)
T PRK05690        109 ARLD-DDELAALIA---GHDLVLDCTDN---------VATR---------NQLNRACFAAKK-PLVSGAAIRMEG  160 (245)
T ss_pred             ccCC-HHHHHHHHh---cCCEEEecCCC---------HHHH---------HHHHHHHHHhCC-EEEEeeeccCCc
Confidence            3333 233444555   88999988531         1110         245666777776 788866654444

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.09  E-value=0.042  Score=43.16  Aligned_cols=32  Identities=19%  Similarity=0.223  Sum_probs=25.6

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      +|+|.| .|-+|+++++.|...|.  -+++..+.+
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gv--g~i~lvD~D   32 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGV--GNLKLVDFD   32 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence            589999 69999999999999994  246666554

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.09  E-value=0.037  Score=45.97  Aligned_cols=105  Identities=19%  Similarity=0.166  Sum_probs=59.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-------------------Chh---hhhhhCCCcce--EEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-------------------LPQ---LLLDALPHSFV--FFD   58 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-------------------~~~---~~~~~~~~~~~--~~~   58 (320)
                      ..+|+|.| .|-+|+.+++.|...|.  -+++..+.+.-                   +++   +.+..+.+.++  .+.
T Consensus        24 ~~~VlvvG-~GglGs~va~~La~~Gv--g~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~  100 (240)
T TIGR02355        24 ASRVLIVG-LGGLGCAASQYLAAAGV--GNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN  100 (240)
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHcCC--CEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            46899999 69999999999999984  34444444311                   111   11111122333  222


Q ss_pred             eeCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        59 ~Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      ..+ +.+.+.++++   ++|+||.+...         ++..         ..+-++|.+.++ ++|+.++...+|
T Consensus       101 ~~i-~~~~~~~~~~---~~DlVvd~~D~---------~~~r---------~~ln~~~~~~~i-p~v~~~~~g~~G  152 (240)
T TIGR02355       101 AKL-DDAELAALIA---EHDIVVDCTDN---------VEVR---------NQLNRQCFAAKV-PLVSGAAIRMEG  152 (240)
T ss_pred             ccC-CHHHHHHHhh---cCCEEEEcCCC---------HHHH---------HHHHHHHHHcCC-CEEEEEecccEe
Confidence            222 2233444454   78999887531         1111         255677777777 788877665555

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=96.08  E-value=0.031  Score=47.19  Aligned_cols=71  Identities=25%  Similarity=0.277  Sum_probs=42.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |+||.|.|+ |.||+.+++.|.+...  .++.+..................+. +.      .+++++ .  .++|+|+-
T Consensus         1 m~rVgIiG~-G~iG~~~~~~l~~~~~--~~l~~v~~~~~~~~~~~~~~~~~~~-~~------~d~~~l-~--~~~DvVve   67 (265)
T PRK13303          1 MMKVAMIGF-GAIGAAVLELLEHDPD--LRVDWVIVPEHSIDAVRRALGEAVR-VV------SSVDAL-P--QRPDLVVE   67 (265)
T ss_pred             CcEEEEECC-CHHHHHHHHHHhhCCC--ceEEEEEEcCCCHHHHhhhhccCCe-ee------CCHHHh-c--cCCCEEEE
Confidence            479999997 9999999999987532  5665555333222222221111111 11      123333 2  37999999


Q ss_pred             CCCc
Q 020880           83 CAAL   86 (320)
Q Consensus        83 ~a~~   86 (320)
                      |++.
T Consensus        68 ~t~~   71 (265)
T PRK13303         68 CAGH   71 (265)
T ss_pred             CCCH
Confidence            9864

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.03  E-value=0.037  Score=46.46  Aligned_cols=101  Identities=20%  Similarity=0.152  Sum_probs=62.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHH-HHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVA-LKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~~~~d~Vi   81 (320)
                      ..+|+|+|++| +|..+++.+...|   .+|+++.++++..+.. ...+  .. ...|..+.+....+. ..-.++|.|+
T Consensus       135 ~~~vli~g~~~-~G~~~~~~a~~~g---~~v~~~~~~~~~~~~~-~~~g--~~-~~~~~~~~~~~~~~~~~~~~~~d~vi  206 (271)
T cd05188         135 GDTVLVLGAGG-VGLLAAQLAKAAG---ARVIVTDRSDEKLELA-KELG--AD-HVIDYKEEDLEEELRLTGGGGADVVI  206 (271)
T ss_pred             CCEEEEECCCH-HHHHHHHHHHHcC---CeEEEEcCCHHHHHHH-HHhC--Cc-eeccCCcCCHHHHHHHhcCCCCCEEE
Confidence            46899999999 9999999999999   7899988886554433 2222  11 123444433333221 1113699999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhh
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV  131 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~v  131 (320)
                      ++++..          ..        ...+++.++..|  +++.++....
T Consensus       207 ~~~~~~----------~~--------~~~~~~~l~~~G--~~v~~~~~~~  236 (271)
T cd05188         207 DAVGGP----------ET--------LAQALRLLRPGG--RIVVVGGTSG  236 (271)
T ss_pred             ECCCCH----------HH--------HHHHHHhcccCC--EEEEEccCCC
Confidence            987631          00        124555555555  7888776543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.00  E-value=0.043  Score=48.30  Aligned_cols=97  Identities=15%  Similarity=0.199  Sum_probs=61.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ..+|+|+|+ |-+|...++.+...|   . .|+++.+++++.+.. ..++.  . ...|..+. ++.++.+..+++|+||
T Consensus       170 g~~VlV~G~-G~vG~~aiqlak~~G---~~~Vi~~~~~~~~~~~a-~~lGa--~-~vi~~~~~-~~~~~~~~~g~~D~vi  240 (343)
T PRK09880        170 GKRVFVSGV-GPIGCLIVAAVKTLG---AAEIVCADVSPRSLSLA-REMGA--D-KLVNPQND-DLDHYKAEKGYFDVSF  240 (343)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC---CcEEEEEeCCHHHHHHH-HHcCC--c-EEecCCcc-cHHHHhccCCCCCEEE
Confidence            468999986 999999999998888   5 588888876655433 33432  2 22344432 2444443223589999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      .+.|..         . .        +...++.++..|  ++|.++.
T Consensus       241 d~~G~~---------~-~--------~~~~~~~l~~~G--~iv~~G~  267 (343)
T PRK09880        241 EVSGHP---------S-S--------INTCLEVTRAKG--VMVQVGM  267 (343)
T ss_pred             ECCCCH---------H-H--------HHHHHHHhhcCC--EEEEEcc
Confidence            998731         0 0        125566666666  7888764

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=95.99  E-value=0.041  Score=45.43  Aligned_cols=37  Identities=24%  Similarity=0.425  Sum_probs=29.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEE-ecCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAA-THHST   40 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~-~~r~~   40 (320)
                      +|+||.|.|++|-+|+.+++.+.+..+  +++.+ ..|.+
T Consensus         1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~--~~L~aa~~~~~   38 (266)
T COG0289           1 SMIKVAVAGASGRMGRTLIRAVLEAPD--LELVAAFDRPG   38 (266)
T ss_pred             CCceEEEEcCCChHHHHHHHHHhcCCC--ceEEEEEecCC
Confidence            368899999999999999999998764  56554 44443

>PRK08328 hypothetical protein; Provisional

Probab=95.96  E-value=0.063  Score=44.32  Aligned_cols=106  Identities=23%  Similarity=0.214  Sum_probs=60.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh-----------------------hhhhhCCCcce--EE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-----------------------LLLDALPHSFV--FF   57 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~-----------------------~~~~~~~~~~~--~~   57 (320)
                      ..+|+|.| .|-+|+++++.|...|.  -+++..+.+.-...                       .....+.+.+.  .+
T Consensus        27 ~~~VlIiG-~GGlGs~ia~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~  103 (231)
T PRK08328         27 KAKVAVVG-VGGLGSPVAYYLAAAGV--GRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETF  103 (231)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEE
Confidence            56899999 68899999999999994  34555543311110                       01111122222  22


Q ss_pred             EeeCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcc
Q 020880           58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG  134 (320)
Q Consensus        58 ~~Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~  134 (320)
                      ...+ +.+.+.++++   ++|+||.+....         +.        . ..+-+.|++.++ ++|+.++...+|.
T Consensus       104 ~~~~-~~~~~~~~l~---~~D~Vid~~d~~---------~~--------r-~~l~~~~~~~~i-p~i~g~~~g~~G~  157 (231)
T PRK08328        104 VGRL-SEENIDEVLK---GVDVIVDCLDNF---------ET--------R-YLLDDYAHKKGI-PLVHGAVEGTYGQ  157 (231)
T ss_pred             eccC-CHHHHHHHHh---cCCEEEECCCCH---------HH--------H-HHHHHHHHHcCC-CEEEEeeccCEEE
Confidence            2233 2333444454   778888775321         10        0 145566777887 7898888777764

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=95.96  E-value=0.027  Score=50.95  Aligned_cols=40  Identities=23%  Similarity=0.353  Sum_probs=34.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhh
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL   47 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~   47 (320)
                      |+|.|.| .|++|..++..|.+.|   ++|++..+++++...+.
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G---~~V~~~d~~~~~v~~l~   40 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLG---HEVTGVDIDQEKVDKLN   40 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcC---CeEEEEECCHHHHHHhh
Confidence            4799998 8999999999999999   78999999877665543

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.95  E-value=0.02  Score=46.64  Aligned_cols=37  Identities=27%  Similarity=0.245  Sum_probs=30.3

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP   41 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~   41 (320)
                      |++++|+|.| .|-+|+++++.|.+.|   ..|+++.-+..
T Consensus        21 l~g~~vaIqG-fGnVG~~~a~~L~~~G---~~vV~vsD~~g   57 (217)
T cd05211          21 LEGLTVAVQG-LGNVGWGLAKKLAEEG---GKVLAVSDPDG   57 (217)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHcC---CEEEEEEcCCC
Confidence            3468999999 8999999999999999   66666655543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.95  E-value=0.067  Score=46.34  Aligned_cols=95  Identities=20%  Similarity=0.211  Sum_probs=66.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++|+|+|+. -+|...++.+...|   .+|++.+|++++.+...+ ++..   +..|-+|++..+.+.+   .+|++|.
T Consensus       167 G~~V~I~G~G-GlGh~avQ~Aka~g---a~Via~~~~~~K~e~a~~-lGAd---~~i~~~~~~~~~~~~~---~~d~ii~  235 (339)
T COG1064         167 GKWVAVVGAG-GLGHMAVQYAKAMG---AEVIAITRSEEKLELAKK-LGAD---HVINSSDSDALEAVKE---IADAIID  235 (339)
T ss_pred             CCEEEEECCc-HHHHHHHHHHHHcC---CeEEEEeCChHHHHHHHH-hCCc---EEEEcCCchhhHHhHh---hCcEEEE
Confidence            5799999965 89999999999999   899999999887644333 2211   2334336666655544   4899999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      +++ . ..                 +...++.++..|  +++.++-.
T Consensus       236 tv~-~-~~-----------------~~~~l~~l~~~G--~~v~vG~~  261 (339)
T COG1064         236 TVG-P-AT-----------------LEPSLKALRRGG--TLVLVGLP  261 (339)
T ss_pred             CCC-h-hh-----------------HHHHHHHHhcCC--EEEEECCC
Confidence            986 2 11                 136777777777  78887744

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=95.93  E-value=0.028  Score=47.49  Aligned_cols=69  Identities=16%  Similarity=0.182  Sum_probs=43.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEE-ecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAA-THHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ||||.|.| .|.||+.+++.|.+.+.. +++.. ..|+.++...+.+.++  ..       -.+++.+++.   ++|+|+
T Consensus         1 mmrIgIIG-~G~iG~~ia~~l~~~~~~-~elv~v~d~~~~~a~~~a~~~~--~~-------~~~~~~ell~---~~DvVv   66 (265)
T PRK13304          1 MLKIGIVG-CGAIASLITKAILSGRIN-AELYAFYDRNLEKAENLASKTG--AK-------ACLSIDELVE---DVDLVV   66 (265)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHcCCCC-eEEEEEECCCHHHHHHHHHhcC--Ce-------eECCHHHHhc---CCCEEE
Confidence            47899999 699999999999876312 56554 4455444444333221  11       1123555554   899999


Q ss_pred             ECCC
Q 020880           82 NCAA   85 (320)
Q Consensus        82 h~a~   85 (320)
                      .|+.
T Consensus        67 i~a~   70 (265)
T PRK13304         67 ECAS   70 (265)
T ss_pred             EcCC
Confidence            9974

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.93  E-value=0.021  Score=48.38  Aligned_cols=69  Identities=19%  Similarity=0.220  Sum_probs=46.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||+|.|.| .|-+|+.++..|.+.|..+++|.+..|+++..+.+.+.++  +.     +.  .+..++++   ++|+||-
T Consensus         2 mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g--~~-----~~--~~~~~~~~---~advVil   68 (267)
T PRK11880          2 MKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYG--VR-----AA--TDNQEAAQ---EADVVVL   68 (267)
T ss_pred             CCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcC--Ce-----ec--CChHHHHh---cCCEEEE
Confidence            57899999 6999999999999887433578888888766554444321  11     11  12333444   7899886


Q ss_pred             CC
Q 020880           83 CA   84 (320)
Q Consensus        83 ~a   84 (320)
                      +.
T Consensus        69 ~v   70 (267)
T PRK11880         69 AV   70 (267)
T ss_pred             Ec
Confidence            64

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.92  E-value=0.024  Score=48.15  Aligned_cols=54  Identities=24%  Similarity=0.369  Sum_probs=41.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+++|+|.|++|.+|+.++..|+++|   .+|+...|+.                        ..+.+.+.   ++|+||
T Consensus       158 ~Gk~vvViG~gg~vGkpia~~L~~~g---atVtv~~~~t------------------------~~L~~~~~---~aDIvI  207 (283)
T PRK14192        158 AGKHAVVVGRSAILGKPMAMMLLNAN---ATVTICHSRT------------------------QNLPELVK---QADIIV  207 (283)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHhCC---CEEEEEeCCc------------------------hhHHHHhc---cCCEEE
Confidence            36899999999999999999999999   7676554421                        11333333   899999


Q ss_pred             ECCC
Q 020880           82 NCAA   85 (320)
Q Consensus        82 h~a~   85 (320)
                      ++.|
T Consensus       208 ~AtG  211 (283)
T PRK14192        208 GAVG  211 (283)
T ss_pred             EccC
Confidence            9986

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.90  E-value=0.072  Score=46.22  Aligned_cols=99  Identities=13%  Similarity=-0.002  Sum_probs=62.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      ..+|+|.|++|-+|..+++.+...|   ..|+.+.++.++...+.+ ++  +. ...+..+.+..+.+.+..  .++|.|
T Consensus       140 g~~vlI~g~~g~ig~~~~~~a~~~G---~~v~~~~~~~~~~~~~~~-~g--~~-~~~~~~~~~~~~~i~~~~~~~~~d~v  212 (324)
T cd08292         140 GQWLIQNAAGGAVGKLVAMLAAARG---INVINLVRRDAGVAELRA-LG--IG-PVVSTEQPGWQDKVREAAGGAPISVA  212 (324)
T ss_pred             CCEEEEcccccHHHHHHHHHHHHCC---CeEEEEecCHHHHHHHHh-cC--CC-EEEcCCCchHHHHHHHHhCCCCCcEE
Confidence            4689999999999999999999999   888888887766554433 32  22 122333333222222222  269999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      +++.|..  .                 ....++.++..|  ++|.++..
T Consensus       213 ~d~~g~~--~-----------------~~~~~~~l~~~g--~~v~~g~~  240 (324)
T cd08292         213 LDSVGGK--L-----------------AGELLSLLGEGG--TLVSFGSM  240 (324)
T ss_pred             EECCCCh--h-----------------HHHHHHhhcCCc--EEEEEecC
Confidence            9987631  0                 024455555555  78887643

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=95.90  E-value=0.013  Score=50.36  Aligned_cols=66  Identities=21%  Similarity=0.278  Sum_probs=46.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|+|.|.| .|.+|+.+++.|.+.|   ++|.+..|++++...+...   ...       -.++..++++   ++|+||-
T Consensus         2 ~~~IgviG-~G~mG~~~a~~l~~~g---~~v~~~d~~~~~~~~~~~~---g~~-------~~~~~~e~~~---~~d~vi~   64 (296)
T PRK11559          2 TMKVGFIG-LGIMGKPMSKNLLKAG---YSLVVYDRNPEAVAEVIAA---GAE-------TASTAKAVAE---QCDVIIT   64 (296)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHHCC---CeEEEEcCCHHHHHHHHHC---CCe-------ecCCHHHHHh---cCCEEEE
Confidence            46899999 7999999999999999   7888888886655443321   111       1123445555   7999997


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +..
T Consensus        65 ~vp   67 (296)
T PRK11559         65 MLP   67 (296)
T ss_pred             eCC
Confidence            753

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.89  E-value=0.023  Score=50.53  Aligned_cols=73  Identities=19%  Similarity=0.265  Sum_probs=56.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .+++||.| .|-+|.-++++|.++|.  .+|+...|..+++..+...++       ++....+.+...+.   .+|+||-
T Consensus       178 ~~~vlvIG-AGem~~lva~~L~~~g~--~~i~IaNRT~erA~~La~~~~-------~~~~~l~el~~~l~---~~DvVis  244 (414)
T COG0373         178 DKKVLVIG-AGEMGELVAKHLAEKGV--KKITIANRTLERAEELAKKLG-------AEAVALEELLEALA---EADVVIS  244 (414)
T ss_pred             cCeEEEEc-ccHHHHHHHHHHHhCCC--CEEEEEcCCHHHHHHHHHHhC-------CeeecHHHHHHhhh---hCCEEEE
Confidence            57899999 69999999999999996  689999999999888887754       33333333444454   8999998


Q ss_pred             CCCccC
Q 020880           83 CAALSV   88 (320)
Q Consensus        83 ~a~~~~   88 (320)
                      +.|...
T Consensus       245 sTsa~~  250 (414)
T COG0373         245 STSAPH  250 (414)
T ss_pred             ecCCCc
Confidence            876543

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.88  E-value=0.021  Score=49.73  Aligned_cols=101  Identities=15%  Similarity=0.050  Sum_probs=62.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh-CCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF-GQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~d~Vi   81 (320)
                      +.+|+|.|++|-+|..+++.+...|   .+|+.+.++++......+.++.  . ...|..+.+....+.+.. .++|+++
T Consensus       146 ~~~vlI~g~~g~ig~~~~~~a~~~G---~~vi~~~~~~~~~~~~~~~~g~--~-~~~~~~~~~~~~~v~~~~~~~~d~vi  219 (329)
T cd05288         146 GETVVVSAAAGAVGSVVGQIAKLLG---ARVVGIAGSDEKCRWLVEELGF--D-AAINYKTPDLAEALKEAAPDGIDVYF  219 (329)
T ss_pred             CCEEEEecCcchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHhhcCC--c-eEEecCChhHHHHHHHhccCCceEEE
Confidence            4689999999999999999999999   7888888776554443332321  1 122333333222222211 3689999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      ++.|..                   .+...++.++..|  ++|.+++..
T Consensus       220 ~~~g~~-------------------~~~~~~~~l~~~G--~~v~~g~~~  247 (329)
T cd05288         220 DNVGGE-------------------ILDAALTLLNKGG--RIALCGAIS  247 (329)
T ss_pred             EcchHH-------------------HHHHHHHhcCCCc--eEEEEeecc
Confidence            987631                   0125555665555  788877543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK08462 biotin carboxylase; Validated

Probab=95.88  E-value=0.094  Score=48.00  Aligned_cols=76  Identities=14%  Similarity=0.175  Sum_probs=51.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEe-------eCCCcccHHHHHHHh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV-------DLKSGSGFDAVALKF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~~   74 (320)
                      .||||||.| .|.++-.+++.+.+.|   +.+++++...+........ .+  +.+..       +..|.+.+-++++..
T Consensus         3 ~~k~ili~~-~g~~~~~~~~~~~~~G---~~~v~~~~~~d~~~~~~~~-ad--~~~~~~~~~~~~~y~~~~~l~~~~~~~   75 (445)
T PRK08462          3 EIKRILIAN-RGEIALRAIRTIQEMG---KEAIAIYSTADKDALYLKY-AD--AKICIGGAKSSESYLNIPAIISAAEIF   75 (445)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHcC---CCEEEEechhhcCCchhhh-CC--EEEEeCCCchhcccCCHHHHHHHHHHc
Confidence            378999999 7999999999999999   7777776554432111111 11  11222       556666677777664


Q ss_pred             CCCCEEEECCC
Q 020880           75 GQPDVVVNCAA   85 (320)
Q Consensus        75 ~~~d~Vih~a~   85 (320)
                       ++|+|+-..+
T Consensus        76 -~~D~i~pg~g   85 (445)
T PRK08462         76 -EADAIFPGYG   85 (445)
T ss_pred             -CCCEEEECCC
Confidence             8999998764

>TIGR00877 purD phosphoribosylamine--glycine ligase

Probab=95.82  E-value=0.042  Score=49.92  Aligned_cols=70  Identities=19%  Similarity=0.059  Sum_probs=45.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |||+|+|+ |..|..|++.+.+.|+. ..++.  .+.........    ...++..|..|.+.+.+++++. ++|.||-
T Consensus         1 ~kiliiG~-G~~~~~l~~~~~~~~~~-~~~~~--~~~~~~~~~~~----~~~~~~~~~~d~~~l~~~~~~~-~id~vi~   70 (423)
T TIGR00877         1 MKVLVIGN-GGREHALAWKLAQSPLV-KYVYV--APGNAGTARLA----KNKNVAISITDIEALVEFAKKK-KIDLAVI   70 (423)
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCCc-cEEEE--ECCCHHHhhhc----ccccccCCCCCHHHHHHHHHHh-CCCEEEE
Confidence            58999995 55699999999988732 23332  22222111111    1233557889988888888875 8998884

This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes.

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=95.82  E-value=0.015  Score=50.72  Aligned_cols=42  Identities=19%  Similarity=0.164  Sum_probs=34.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD   48 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~   48 (320)
                      ||+|.|.| .|-+|+.++..|.+.|   ++|.+..|+++..+.+..
T Consensus         1 mmkI~iiG-~G~mG~~~a~~L~~~g---~~V~~~~r~~~~~~~~~~   42 (325)
T PRK00094          1 MMKIAVLG-AGSWGTALAIVLARNG---HDVTLWARDPEQAAEINA   42 (325)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHH
Confidence            46899999 6999999999999999   788888887665554433

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.82  E-value=0.074  Score=46.12  Aligned_cols=99  Identities=20%  Similarity=0.138  Sum_probs=63.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      ..+|+|+|++|-+|..+++.+...|   .+|+.+.++++..+.+ ..++  .. ...|..+.+....+.+..  .++|.|
T Consensus       143 ~~~vlI~g~~~~~g~~~~~la~~~g---~~v~~~~~~~~~~~~~-~~~g--~~-~~~~~~~~~~~~~~~~~~~~~~~d~v  215 (324)
T cd08244         143 GDVVLVTAAAGGLGSLLVQLAKAAG---ATVVGAAGGPAKTALV-RALG--AD-VAVDYTRPDWPDQVREALGGGGVTVV  215 (324)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHH-HHcC--CC-EEEecCCccHHHHHHHHcCCCCceEE
Confidence            4689999999999999999999999   7888888876655444 3332  22 223444444333333222  258999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      +++.+....                   ...++.++..|  ++|.++..
T Consensus       216 l~~~g~~~~-------------------~~~~~~l~~~g--~~v~~g~~  243 (324)
T cd08244         216 LDGVGGAIG-------------------RAALALLAPGG--RFLTYGWA  243 (324)
T ss_pred             EECCChHhH-------------------HHHHHHhccCc--EEEEEecC
Confidence            998763100                   24555555555  78888754

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.82  E-value=0.053  Score=47.85  Aligned_cols=105  Identities=17%  Similarity=0.015  Sum_probs=60.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-------------------CChhh---hhhhCCCcce--EEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-------------------PLPQL---LLDALPHSFV--FFD   58 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-------------------~~~~~---~~~~~~~~~~--~~~   58 (320)
                      ..+|+|.| .|-+|+++++.|...|.  -++...+.+.                   .+.+.   .+..+.+.+.  .+.
T Consensus        28 ~~~VlivG-~GGlGs~~a~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         28 DAKVAVIG-AGGLGSPALLYLAGAGV--GHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHcCC--CeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            57999999 58999999999999984  3444444431                   11111   1111223333  333


Q ss_pred             eeCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        59 ~Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      ..++. +...+.++   ++|+||.+...         +..-         ..+-++|.+.++ .+|+.++...+|
T Consensus       105 ~~i~~-~~~~~~~~---~~DvVvd~~d~---------~~~r---------~~~n~~c~~~~i-p~v~~~~~g~~g  156 (355)
T PRK05597        105 RRLTW-SNALDELR---DADVILDGSDN---------FDTR---------HLASWAAARLGI-PHVWASILGFDA  156 (355)
T ss_pred             eecCH-HHHHHHHh---CCCEEEECCCC---------HHHH---------HHHHHHHHHcCC-CEEEEEEecCeE
Confidence            44443 33344554   89999988632         1110         135566777776 788877655444

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.81  E-value=0.059  Score=46.42  Aligned_cols=112  Identities=13%  Similarity=0.135  Sum_probs=68.8

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceE---EEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVF---FDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |.|.|+ |.+|+.++-.|+..|.. .++.+.+++++....+...+..-...   ......+  +.. .+.   ++|+||.
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~-~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~--~~~-~l~---~aDiVIi   72 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLA-SELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGG--DYA-DAA---DADIVVI   72 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCC-CEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECC--CHH-HhC---CCCEEEE
Confidence            468885 88999999999988753 57888888877655444333111110   0111111  122 333   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      +||....  ...+....+..|+.-. ..+.+..++.+.+ .+|..|.
T Consensus        73 tag~p~~--~~~~R~~l~~~n~~i~-~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          73 TAGAPRK--PGETRLDLINRNAPIL-RSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             cCCCCCC--CCCCHHHHHHHHHHHH-HHHHHHHHHhCCCeEEEEccC
Confidence            9986432  2345567777787655 3677777766533 5666664

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.80  E-value=0.028  Score=41.42  Aligned_cols=33  Identities=24%  Similarity=0.487  Sum_probs=27.9

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      |.|+|+||-||+...+-+.+..+. ++|+++.-.
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~-f~v~~Lsa~   33 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDK-FEVVALSAG   33 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTT-EEEEEEEES
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCc-eEEEEEEcC
Confidence            689999999999999988887655 888877654

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.78  E-value=0.085  Score=39.92  Aligned_cols=103  Identities=17%  Similarity=0.131  Sum_probs=58.7

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-------------------CChhh---hhhhCCCcce--EEEee
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-------------------PLPQL---LLDALPHSFV--FFDVD   60 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-------------------~~~~~---~~~~~~~~~~--~~~~D   60 (320)
                      +|+|.|+ |-+|+.+++.|...|.  -++...+.+.                   .+.+.   ....+.+.++  .+..+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv--~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~   77 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGV--GKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEG   77 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCC--CEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeee
Confidence            5899995 9999999999999994  2455554431                   11111   1111122332  23333


Q ss_pred             CCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        61 l~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      +.+.. ..+.++   ++|+||.+....         ..        . ..+.+.|++.++ .+|..++...+|
T Consensus        78 ~~~~~-~~~~~~---~~diVi~~~d~~---------~~--------~-~~l~~~~~~~~i-~~i~~~~~g~~g  127 (143)
T cd01483          78 ISEDN-LDDFLD---GVDLVIDAIDNI---------AV--------R-RALNRACKELGI-PVIDAGGLGLGG  127 (143)
T ss_pred             cChhh-HHHHhc---CCCEEEECCCCH---------HH--------H-HHHHHHHHHcCC-CEEEEcCCCcEE
Confidence            33322 223333   889999876421         11        0 367778888886 788887765443

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=95.76  E-value=0.03  Score=55.30  Aligned_cols=149  Identities=17%  Similarity=0.196  Sum_probs=93.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh---hhhhhhC-CCcceEEEe---eCCCcccHHHHHHH--
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP---QLLLDAL-PHSFVFFDV---DLKSGSGFDAVALK--   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~---~~~~~~~-~~~~~~~~~---Dl~d~~~~~~~~~~--   73 (320)
                      -|.++|+||-|-.|-.|++-|+.+|.  -.+++..|+-=+.   ......+ ..++. ++.   |++..+.-..+++.  
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGa--r~lVLtSRsGirtGYQa~~vrrWr~~GVq-V~vsT~nitt~~ga~~Li~~s~ 1844 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGA--RKLVLTSRSGIRTGYQALMVRRWRRRGVQ-VQVSTSNITTAEGARGLIEESN 1844 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCc--eEEEEeccccchhhHHHHHHHHHHhcCeE-EEEecccchhhhhHHHHHHHhh
Confidence            46899999999999999999999995  4566677763221   1111111 12343 444   44444444444442  


Q ss_pred             -hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCC
Q 020880           74 -FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                       ++-+--|||+|+.....    .+.++.+...+..+.+|+ ++-...++.  -.+-||.+||...=..+.          
T Consensus      1845 kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti-~LD~~sRe~C~~LdyFv~FSSvscGRGN~---------- 1913 (2376)
T KOG1202|consen 1845 KLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTI-NLDRVSREICPELDYFVVFSSVSCGRGNA---------- 1913 (2376)
T ss_pred             hcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeee-ehhhhhhhhCcccceEEEEEeecccCCCC----------
Confidence             33466799999875322    122344455566677775 666655553  245899999876532222          


Q ss_pred             CcchHHHHHHHHHHHHHHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK  165 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~  165 (320)
                      ..+.||.+-..+|+++++-
T Consensus      1914 GQtNYG~aNS~MERiceqR 1932 (2376)
T KOG1202|consen 1914 GQTNYGLANSAMERICEQR 1932 (2376)
T ss_pred             cccccchhhHHHHHHHHHh
Confidence            3678999999999999763

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.73  E-value=0.01  Score=50.85  Aligned_cols=41  Identities=27%  Similarity=0.282  Sum_probs=34.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhh
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL   45 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~   45 (320)
                      |.+++|.|.| +|.+|+.++..|...|   ++|++..++++..++
T Consensus         1 ~~~~kIaViG-aG~mG~~iA~~la~~G---~~V~l~d~~~~~l~~   41 (287)
T PRK08293          1 MDIKNVTVAG-AGVLGSQIAFQTAFHG---FDVTIYDISDEALEK   41 (287)
T ss_pred             CCccEEEEEC-CCHHHHHHHHHHHhcC---CeEEEEeCCHHHHHH
Confidence            5668999999 6999999999999999   889999988665443

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.73  E-value=0.032  Score=48.56  Aligned_cols=96  Identities=19%  Similarity=0.137  Sum_probs=61.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCc--ccHHHHHHHhCCCCEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG--SGFDAVALKFGQPDVVV   81 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+|.|++|.+|..+++.+...|   .+|+.+.+++++.+.. ..++  +. ...|..+.  +.+... .. .++|.|+
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~g---~~v~~~~~~~~~~~~~-~~~g--~~-~v~~~~~~~~~~~~~~-~~-~~~d~vl  218 (326)
T cd08289         148 GPVLVTGATGGVGSLAVSILAKLG---YEVVASTGKADAADYL-KKLG--AK-EVIPREELQEESIKPL-EK-QRWAGAV  218 (326)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCC---CeEEEEecCHHHHHHH-HHcC--CC-EEEcchhHHHHHHHhh-cc-CCcCEEE
Confidence            589999999999999999999999   8888888887665544 3332  22 12232322  122222 11 2689999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      ++.+..  .                 +...+..++..|  ++|.++..
T Consensus       219 d~~g~~--~-----------------~~~~~~~l~~~G--~~i~~g~~  245 (326)
T cd08289         219 DPVGGK--T-----------------LAYLLSTLQYGG--SVAVSGLT  245 (326)
T ss_pred             ECCcHH--H-----------------HHHHHHHhhcCC--EEEEEeec
Confidence            987521  0                 024555556666  78888754

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=95.68  E-value=0.03  Score=47.43  Aligned_cols=36  Identities=25%  Similarity=0.348  Sum_probs=27.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP   41 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~   41 (320)
                      .+++|+|.| .|.||+.+++.|.++|   +.+...+++.+
T Consensus         2 ~~~~v~IvG-~GliG~s~a~~l~~~g---~~v~i~g~d~~   37 (279)
T COG0287           2 ASMKVGIVG-LGLMGGSLARALKEAG---LVVRIIGRDRS   37 (279)
T ss_pred             CCcEEEEEC-CchHHHHHHHHHHHcC---CeEEEEeecCc
Confidence            457788877 9999999999999999   55555555443

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.68  E-value=0.053  Score=47.42  Aligned_cols=65  Identities=12%  Similarity=0.132  Sum_probs=45.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+|.|.| .|-||+.+++.|..-|   ++|.+..|......  ....  ..     .   ..++.++++   ++|+|+
T Consensus       149 ~gktvgIiG-~G~IG~~vA~~l~~~G---~~V~~~d~~~~~~~--~~~~--~~-----~---~~~l~ell~---~aDiV~  209 (333)
T PRK13243        149 YGKTIGIIG-FGRIGQAVARRAKGFG---MRILYYSRTRKPEA--EKEL--GA-----E---YRPLEELLR---ESDFVS  209 (333)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCC---CEEEEECCCCChhh--HHHc--CC-----E---ecCHHHHHh---hCCEEE
Confidence            368999999 7999999999999999   88998888753321  1111  11     1   124666776   789988


Q ss_pred             ECCC
Q 020880           82 NCAA   85 (320)
Q Consensus        82 h~a~   85 (320)
                      .+.-
T Consensus       210 l~lP  213 (333)
T PRK13243        210 LHVP  213 (333)
T ss_pred             EeCC
Confidence            7763

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.67  E-value=0.019  Score=50.23  Aligned_cols=41  Identities=22%  Similarity=0.161  Sum_probs=34.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL   47 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~   47 (320)
                      +|+|.|.| +|-+|+.++..|.+.|   ++|++..|+++..+.+.
T Consensus         4 ~m~I~iIG-~G~mG~~ia~~L~~~G---~~V~~~~r~~~~~~~i~   44 (328)
T PRK14618          4 GMRVAVLG-AGAWGTALAVLAASKG---VPVRLWARRPEFAAALA   44 (328)
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHH
Confidence            57899998 7999999999999999   78999999766554443

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.67  E-value=0.082  Score=46.35  Aligned_cols=97  Identities=21%  Similarity=0.207  Sum_probs=59.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCce-EEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYD-VAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~   79 (320)
                      ..+|+|+|+ |-+|..+++.+...|   .+ |+++.+++++.+.. ..++  .. ...|..+.+ .+.+.+..  .++|+
T Consensus       164 g~~vlV~G~-G~vG~~~~~~ak~~G---~~~vi~~~~~~~~~~~~-~~~g--a~-~~i~~~~~~-~~~~~~~~~~~~~d~  234 (339)
T cd08239         164 RDTVLVVGA-GPVGLGALMLARALG---AEDVIGVDPSPERLELA-KALG--AD-FVINSGQDD-VQEIRELTSGAGADV  234 (339)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC---CCEEEEECCCHHHHHHH-HHhC--CC-EEEcCCcch-HHHHHHHhCCCCCCE
Confidence            468999985 999999999999999   67 88888776554433 3332  12 223444433 33332222  26899


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      ||.+.+...          .        +...++.++..|  +++.++.
T Consensus       235 vid~~g~~~----------~--------~~~~~~~l~~~G--~~v~~g~  263 (339)
T cd08239         235 AIECSGNTA----------A--------RRLALEAVRPWG--RLVLVGE  263 (339)
T ss_pred             EEECCCCHH----------H--------HHHHHHHhhcCC--EEEEEcC
Confidence            999976310          0        014455556666  7887764

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.67  E-value=0.035  Score=48.36  Aligned_cols=100  Identities=20%  Similarity=0.123  Sum_probs=63.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +.+|+|.|++|-+|..+++.+...|   .+|+.+.++++....+ ..++.  . ...+..+.+ +.+.+...  .++|.|
T Consensus       140 ~~~vlI~ga~g~ig~~~~~~a~~~g---~~v~~~~~~~~~~~~~-~~~g~--~-~v~~~~~~~-~~~~~~~~~~~~vd~v  211 (329)
T cd08250         140 GETVLVTAAAGGTGQFAVQLAKLAG---CHVIGTCSSDEKAEFL-KSLGC--D-RPINYKTED-LGEVLKKEYPKGVDVV  211 (329)
T ss_pred             CCEEEEEeCccHHHHHHHHHHHHcC---CeEEEEeCcHHHHHHH-HHcCC--c-eEEeCCCcc-HHHHHHHhcCCCCeEE
Confidence            4689999999999999999999999   7888888876555444 33321  1 122333322 22222211  368999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhh
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV  131 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~v  131 (320)
                      +++.+..  .                 +...++.++..|  ++|.+++...
T Consensus       212 ~~~~g~~--~-----------------~~~~~~~l~~~g--~~v~~g~~~~  241 (329)
T cd08250         212 YESVGGE--M-----------------FDTCVDNLALKG--RLIVIGFISG  241 (329)
T ss_pred             EECCcHH--H-----------------HHHHHHHhccCC--eEEEEecccC
Confidence            9987621  0                 024555565666  8888877643

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.66  E-value=0.016  Score=54.66  Aligned_cols=71  Identities=14%  Similarity=0.072  Sum_probs=56.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      .+|+|.| .|-+|++++++|.++|   ++++..+++++..+...+   .+...+.+|.+|++.++++--  +++|.|+-+
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~g---~~vvvId~d~~~~~~~~~---~g~~~i~GD~~~~~~L~~a~i--~~a~~viv~  488 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAAG---IPLVVIETSRTRVDELRE---RGIRAVLGNAANEEIMQLAHL--DCARWLLLT  488 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHH---CCCeEEEcCCCCHHHHHhcCc--cccCEEEEE
Confidence            4789999 7999999999999999   788889888776665543   357789999999887765422  378877744

>PRK07877 hypothetical protein; Provisional

Probab=95.64  E-value=0.043  Score=52.67  Aligned_cols=100  Identities=17%  Similarity=0.093  Sum_probs=58.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC------------------CChh---hhhhhCCCc--ceEEEe
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST------------------PLPQ---LLLDALPHS--FVFFDV   59 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~------------------~~~~---~~~~~~~~~--~~~~~~   59 (320)
                      ..+|+|.|+ | +|++++..|...|-- -++++.+.+.                  .|..   +......+.  ++.+..
T Consensus       107 ~~~V~IvG~-G-lGs~~a~~LaraGvv-G~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~  183 (722)
T PRK07877        107 RLRIGVVGL-S-VGHAIAHTLAAEGLC-GELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTD  183 (722)
T ss_pred             cCCEEEEEe-c-HHHHHHHHHHHccCC-CeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEec
Confidence            568999998 8 999999999998820 1344333320                  0111   111111223  344444


Q ss_pred             eCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        60 Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      .++ ++.+.++++   ++|+|+.|.--.                 ..- ..+-++|.+.++ .+|+.|+
T Consensus       184 ~i~-~~n~~~~l~---~~DlVvD~~D~~-----------------~~R-~~ln~~a~~~~i-P~i~~~~  229 (722)
T PRK07877        184 GLT-EDNVDAFLD---GLDVVVEECDSL-----------------DVK-VLLREAARARRI-PVLMATS  229 (722)
T ss_pred             cCC-HHHHHHHhc---CCCEEEECCCCH-----------------HHH-HHHHHHHHHcCC-CEEEEcC
Confidence            454 456666665   899999886311                 111 255677778887 7887775

>PRK13301 putative L-aspartate dehydrogenase; Provisional

Probab=95.63  E-value=0.065  Score=44.63  Aligned_cols=70  Identities=26%  Similarity=0.409  Sum_probs=44.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-ChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-LPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +||.|.| .|.||+.+++.|.+.+...+++..+.++.. +...+..    .     +.  -.+++.+++.  .++|+|+-
T Consensus         3 ~rvgiIG-~GaIG~~va~~l~~~~~~~~~l~~V~~~~~~~~~~~~~----~-----~~--~~~~l~~ll~--~~~DlVVE   68 (267)
T PRK13301          3 HRIAFIG-LGAIASDVAAGLLADAAQPCQLAALTRNAADLPPALAG----R-----VA--LLDGLPGLLA--WRPDLVVE   68 (267)
T ss_pred             eEEEEEC-ccHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHhhc----c-----Cc--ccCCHHHHhh--cCCCEEEE
Confidence            6899999 899999999998765322267666655543 2222211    1     11  1223555543  38999999


Q ss_pred             CCCcc
Q 020880           83 CAALS   87 (320)
Q Consensus        83 ~a~~~   87 (320)
                      ||+..
T Consensus        69 ~A~~~   73 (267)
T PRK13301         69 AAGQQ   73 (267)
T ss_pred             CCCHH
Confidence            99864

>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit

Probab=95.63  E-value=0.12  Score=47.28  Aligned_cols=75  Identities=13%  Similarity=0.124  Sum_probs=47.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEe-------eCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV-------DLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~   75 (320)
                      ||||||.| .|.++..+++.+.+.|   ++|++++...+....... +.+  +++..       +..|.+.+.+++... 
T Consensus         2 ~kkili~g-~g~~~~~~~~aa~~lG---~~vv~~~~~~d~~a~~~~-~aD--~~~~~~~~~~~~~y~d~~~l~~~a~~~-   73 (449)
T TIGR00514         2 LDKILIAN-RGEIALRILRACKELG---IKTVAVHSTADRDALHVL-LAD--EAVCIGPAPSAKSYLNIPNIISAAEIT-   73 (449)
T ss_pred             cceEEEeC-CCHHHHHHHHHHHHcC---CeEEEEEChhhhcccccc-cCC--EEEEcCCCCchhchhCHHHHHHHHHHh-
Confidence            68999998 7999999999999999   788877653221110000 011  11221       344445566655553 


Q ss_pred             CCCEEEECCC
Q 020880           76 QPDVVVNCAA   85 (320)
Q Consensus        76 ~~d~Vih~a~   85 (320)
                      ++|+|+-..+
T Consensus        74 ~id~I~pg~g   83 (449)
T TIGR00514        74 GADAIHPGYG   83 (449)
T ss_pred             CCCEEEeCCC
Confidence            8999997654

This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.62  E-value=0.089  Score=46.59  Aligned_cols=98  Identities=12%  Similarity=0.114  Sum_probs=60.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCce-EEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYD-VAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~   79 (320)
                      ..+|||.|+ |-+|..+++.+...|   .. |+++.+++++.+.. ..++.  . ...|..+.+..+.+.+..  .++|+
T Consensus       177 g~~VlV~G~-g~vG~~a~~~ak~~G---~~~Vi~~~~~~~~~~~~-~~~Ga--~-~~i~~~~~~~~~~i~~~~~~~g~d~  248 (358)
T TIGR03451       177 GDSVAVIGC-GGVGDAAIAGAALAG---ASKIIAVDIDDRKLEWA-REFGA--T-HTVNSSGTDPVEAIRALTGGFGADV  248 (358)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC---CCeEEEEcCCHHHHHHH-HHcCC--c-eEEcCCCcCHHHHHHHHhCCCCCCE
Confidence            468999985 999999999999889   64 88887776554433 33332  1 223444433333332222  25899


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      ||.+.|..         . .+        ...++.++..|  ++|.++.
T Consensus       249 vid~~g~~---------~-~~--------~~~~~~~~~~G--~iv~~G~  277 (358)
T TIGR03451       249 VIDAVGRP---------E-TY--------KQAFYARDLAG--TVVLVGV  277 (358)
T ss_pred             EEECCCCH---------H-HH--------HHHHHHhccCC--EEEEECC
Confidence            99998731         0 11        24455556666  7888775

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=95.61  E-value=0.037  Score=49.46  Aligned_cols=70  Identities=24%  Similarity=0.422  Sum_probs=53.2

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEECC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCA   84 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a   84 (320)
                      ||+|+| +|..|..+++.+.+.|   ++|+.++.++........   +  .++..|..|++.+.++++.. ++|.|+-..
T Consensus         1 kililG-~g~~~~~l~~aa~~~G---~~v~~~d~~~~~~~~~~a---d--~~~~~~~~d~~~l~~~~~~~-~id~v~~~~   70 (380)
T TIGR01142         1 RVLLLG-SGELGKEVAIEAQRLG---VEVIAVDRYANAPAMQVA---H--RSYVINMLDGDALRAVIERE-KPDYIVPEI   70 (380)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcC---CEEEEEeCCCCCchhhhC---c--eEEEcCCCCHHHHHHHHHHh-CCCEEEecc
Confidence            689999 6999999999999999   888888887644322111   1  33667888988888888764 799998654

This enzyme is an alternative to PurN (TIGR00639)

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.60  E-value=0.096  Score=43.12  Aligned_cols=33  Identities=21%  Similarity=0.229  Sum_probs=26.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH   38 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r   38 (320)
                      ..+|+|.| .|-+|+++++.|...|-  -++++.+.
T Consensus        11 ~~~VlVvG-~GGvGs~va~~Lar~GV--g~i~LvD~   43 (231)
T cd00755          11 NAHVAVVG-LGGVGSWAAEALARSGV--GKLTLIDF   43 (231)
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCC--CEEEEECC
Confidence            57899999 78999999999999984  34554444

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.59  E-value=0.026  Score=48.83  Aligned_cols=72  Identities=15%  Similarity=0.257  Sum_probs=47.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      +.++|.|.| +|-+|+.++..|.+.|.. .+|++..|+++....... .+  +.   ....  ....+.++   ++|+||
T Consensus         5 ~~~~I~IIG-~G~mG~sla~~l~~~g~~-~~V~~~dr~~~~~~~a~~-~g--~~---~~~~--~~~~~~~~---~aDvVi   71 (307)
T PRK07502          5 LFDRVALIG-IGLIGSSLARAIRRLGLA-GEIVGADRSAETRARARE-LG--LG---DRVT--TSAAEAVK---GADLVI   71 (307)
T ss_pred             CCcEEEEEe-eCHHHHHHHHHHHhcCCC-cEEEEEECCHHHHHHHHh-CC--CC---ceec--CCHHHHhc---CCCEEE
Confidence            357899999 899999999999998842 478888888654443322 11  10   0011  12333444   899999


Q ss_pred             ECCCc
Q 020880           82 NCAAL   86 (320)
Q Consensus        82 h~a~~   86 (320)
                      .+...
T Consensus        72 iavp~   76 (307)
T PRK07502         72 LCVPV   76 (307)
T ss_pred             ECCCH
Confidence            88753

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=95.56  E-value=0.034  Score=48.98  Aligned_cols=81  Identities=22%  Similarity=0.298  Sum_probs=50.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEec--CCCCChhhhhhhCCCcceEEEeeCC------------------
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDVDLK------------------   62 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~Dl~------------------   62 (320)
                      ||+|.|.|+||-||+..++.+.+.... ++|++++  ++.+....+...+++.... ..|-.                  
T Consensus         1 mk~VaILGsTGSIG~~tL~vi~~~p~~-f~VvaLaa~~n~~~l~~q~~~f~p~~v~-i~~~~~~~~l~~~l~~~~~~v~~   78 (385)
T PRK05447          1 MKRITILGSTGSIGTQTLDVIRRNPDR-FRVVALSAGKNVELLAEQAREFRPKYVV-VADEEAAKELKEALAAAGIEVLA   78 (385)
T ss_pred             CceEEEEcCChHHHHHHHHHHHhCccc-cEEEEEEcCCCHHHHHHHHHHhCCCEEE-EcCHHHHHHHHHhhccCCceEEE
Confidence            589999999999999999888764333 8888886  3334455555555433321 22211                  


Q ss_pred             CcccHHHHHHHhCCCCEEEECCCc
Q 020880           63 SGSGFDAVALKFGQPDVVVNCAAL   86 (320)
Q Consensus        63 d~~~~~~~~~~~~~~d~Vih~a~~   86 (320)
                      -.+.+.++++. .++|+|+....-
T Consensus        79 G~~~~~~l~~~-~~vD~Vv~Ai~G  101 (385)
T PRK05447         79 GEEGLCELAAL-PEADVVVAAIVG  101 (385)
T ss_pred             ChhHHHHHhcC-CCCCEEEEeCcC
Confidence            12234444442 268999987653

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.53  E-value=0.055  Score=45.84  Aligned_cols=55  Identities=20%  Similarity=0.283  Sum_probs=42.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+++|+|.|+++.+|..++..|+++|   .+|+...++.                        ..+.+.+.   ++|+||
T Consensus       157 ~Gk~vvVIGrs~~VG~pla~lL~~~g---atVtv~~s~t------------------------~~l~~~~~---~ADIVI  206 (286)
T PRK14175        157 EGKNAVVIGRSHIVGQPVSKLLLQKN---ASVTILHSRS------------------------KDMASYLK---DADVIV  206 (286)
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCC---CeEEEEeCCc------------------------hhHHHHHh---hCCEEE
Confidence            47899999999999999999999998   7777655431                        12444555   789999


Q ss_pred             ECCCc
Q 020880           82 NCAAL   86 (320)
Q Consensus        82 h~a~~   86 (320)
                      ...|.
T Consensus       207 sAvg~  211 (286)
T PRK14175        207 SAVGK  211 (286)
T ss_pred             ECCCC
Confidence            88775

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.52  E-value=0.09  Score=46.64  Aligned_cols=96  Identities=20%  Similarity=0.138  Sum_probs=58.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ..+|+|.| .|-||..+++.+...|   .+|+++..+.++.......++  .. ...|..+.+.+.+..   +++|+||.
T Consensus       184 g~~VlV~G-~G~vG~~avq~Ak~~G---a~vi~~~~~~~~~~~~~~~~G--a~-~vi~~~~~~~~~~~~---~~~D~vid  253 (360)
T PLN02586        184 GKHLGVAG-LGGLGHVAVKIGKAFG---LKVTVISSSSNKEDEAINRLG--AD-SFLVSTDPEKMKAAI---GTMDYIID  253 (360)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEeCCcchhhhHHHhCC--Cc-EEEcCCCHHHHHhhc---CCCCEEEE
Confidence            46899977 5999999999999999   778777766554433333333  12 122333333333322   36899999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      +.|..  .        .        +...++.++..|  +++.++.
T Consensus       254 ~~g~~--~--------~--------~~~~~~~l~~~G--~iv~vG~  279 (360)
T PLN02586        254 TVSAV--H--------A--------LGPLLGLLKVNG--KLITLGL  279 (360)
T ss_pred             CCCCH--H--------H--------HHHHHHHhcCCc--EEEEeCC
Confidence            87621  0        0        124566666666  7887763

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=95.51  E-value=0.092  Score=44.46  Aligned_cols=66  Identities=18%  Similarity=0.263  Sum_probs=46.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      ++|.+.| .|-.|+.++.+|+++|   ++|++..|++++..++....+..         -.++..++..   ++|+||-|
T Consensus         1 ~kIafIG-LG~MG~pmA~~L~~aG---~~v~v~~r~~~ka~~~~~~~Ga~---------~a~s~~eaa~---~aDvVitm   64 (286)
T COG2084           1 MKIAFIG-LGIMGSPMAANLLKAG---HEVTVYNRTPEKAAELLAAAGAT---------VAASPAEAAA---EADVVITM   64 (286)
T ss_pred             CeEEEEc-CchhhHHHHHHHHHCC---CEEEEEeCChhhhhHHHHHcCCc---------ccCCHHHHHH---hCCEEEEe
Confidence            4688888 9999999999999999   89999999988855444432211         1112334444   67777766


Q ss_pred             CC
Q 020880           84 AA   85 (320)
Q Consensus        84 a~   85 (320)
                      -.
T Consensus        65 v~   66 (286)
T COG2084          65 LP   66 (286)
T ss_pred             cC
Confidence            43

>PLN02928 oxidoreductase family protein

Probab=95.50  E-value=0.14  Score=45.10  Aligned_cols=78  Identities=22%  Similarity=0.184  Sum_probs=49.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC-CcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      .+|++.|.| .|-||+.+++.|..-|   .+|++..|+..+.......++ ....-+........++.+++.   ++|+|
T Consensus       158 ~gktvGIiG-~G~IG~~vA~~l~afG---~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~---~aDiV  230 (347)
T PLN02928        158 FGKTVFILG-YGAIGIELAKRLRPFG---VKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAG---EADIV  230 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhCC---CEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHh---hCCEE
Confidence            368999999 7999999999999999   899998886432111000000 000000001113446778887   78998


Q ss_pred             EECCCc
Q 020880           81 VNCAAL   86 (320)
Q Consensus        81 ih~a~~   86 (320)
                      +.+...
T Consensus       231 vl~lPl  236 (347)
T PLN02928        231 VLCCTL  236 (347)
T ss_pred             EECCCC
Confidence            887643

>PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated

Probab=95.49  E-value=0.14  Score=46.98  Aligned_cols=75  Identities=9%  Similarity=0.089  Sum_probs=49.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceE-----EEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVF-----FDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~-----~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      +|||||.| +|.+|..+++.+.+.|   +.+++++.+++........ .+....     ...|..|.+.+.++++.. ++
T Consensus         2 ~~~ililg-~g~~~~~~~~~a~~lG---~~~v~~~~~~~~~a~~~~~-ad~~~~~~~~~~~~~~~d~~~l~~~~~~~-~i   75 (450)
T PRK06111          2 FQKVLIAN-RGEIAVRIIRTCQKLG---IRTVAIYSEADRDALHVKM-ADEAYLIGGPRVQESYLNLEKIIEIAKKT-GA   75 (450)
T ss_pred             cceEEEEC-CcHHHHHHHHHHHHcC---CeEEEEechhhccCcchhh-CCEEEEcCCCCccccccCHHHHHHHHHHh-CC
Confidence            58999999 7999999999999999   7777776443321111100 011110     124666777777777764 88


Q ss_pred             CEEEEC
Q 020880           78 DVVVNC   83 (320)
Q Consensus        78 d~Vih~   83 (320)
                      |.|+-.
T Consensus        76 d~I~p~   81 (450)
T PRK06111         76 EAIHPG   81 (450)
T ss_pred             CEEEeC
Confidence            998864

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=95.48  E-value=0.026  Score=48.51  Aligned_cols=65  Identities=12%  Similarity=0.170  Sum_probs=47.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |++|.|.| .|.+|+.++..|++.|   ++|.+..|++++.+.+.+.   ..       ....+..++.+   ++|+||-
T Consensus         1 m~~Ig~IG-lG~mG~~mA~~l~~~G---~~V~v~d~~~~~~~~~~~~---g~-------~~~~s~~~~~~---~aDvVi~   63 (296)
T PRK15461          1 MAAIAFIG-LGQMGSPMASNLLKQG---HQLQVFDVNPQAVDALVDK---GA-------TPAASPAQAAA---GAEFVIT   63 (296)
T ss_pred             CCeEEEEe-eCHHHHHHHHHHHHCC---CeEEEEcCCHHHHHHHHHc---CC-------cccCCHHHHHh---cCCEEEE
Confidence            35899998 8999999999999999   7888889987766555432   11       11123445555   7899887


Q ss_pred             CC
Q 020880           83 CA   84 (320)
Q Consensus        83 ~a   84 (320)
                      +.
T Consensus        64 ~v   65 (296)
T PRK15461         64 ML   65 (296)
T ss_pred             ec
Confidence            75

>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit

Probab=95.47  E-value=0.067  Score=54.23  Aligned_cols=149  Identities=19%  Similarity=0.181  Sum_probs=78.1

Q ss_pred             CcEEEEEcCCCh-hhH---------HHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH
Q 020880            3 KKRVLVVGGTGY-LGQ---------HLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         3 ~~~ilItGatG~-IG~---------~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      .+||||+|+... ||+         ++++.|.+.|   ++|+.+..+++....-.. ..+.   ...+-.+.+.+.++++
T Consensus       554 ~~kvlvlG~G~~rig~~~efd~~~v~~i~al~~~G---~~vI~v~~npetvs~d~~-~~D~---ly~ep~~~e~vl~i~~  626 (1050)
T TIGR01369       554 KKKVLVLGSGPNRIGQGVEFDYCCVHAVLALRELG---YETIMINYNPETVSTDYD-TSDR---LYFEPLTFEDVMNIIE  626 (1050)
T ss_pred             CceEEEecCcccccccccccchHHHHHHHHHHhCC---CEEEEEecCCcccccccc-ccce---EEEecCCHHHHHHHHh
Confidence            469999997654 555         7799999999   888888777654211111 0111   1223334555666666


Q ss_pred             HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh--cccCC---CCcccCCCCC
Q 020880           73 KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY--EGVKS---FYKEEDEIAP  147 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy--~~~~~---~~~E~~~~~p  147 (320)
                      .. ++|.||-..+..          .        . .++.+.+.+.|+ +++..|...+-  .+...   .+.+...+.|
T Consensus       627 ~e-~idgVI~~~gg~----------~--------~-~~la~~le~~Gi-~i~G~s~~~i~~~~DK~~f~~lL~~~GIp~P  685 (1050)
T TIGR01369       627 LE-KPEGVIVQFGGQ----------T--------P-LNLAKALEEAGV-PILGTSPESIDRAEDREKFSELLDELGIPQP  685 (1050)
T ss_pred             hc-CCCEEEEccCcH----------h--------H-HHHHHHHHHCCC-cEECCCHHHHHHHCCHHHHHHHHHHCCcCCC
Confidence            53 899988443210          0        0 245555556666 44443332221  11100   1223333344


Q ss_pred             cchHHHHHHHHHHHHHHHcCCeeEEeecccccC
Q 020880          148 VNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP  180 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~~ilR~~~v~G~  180 (320)
                      .+....+.-.++.++.+.+-+ +++||....|.
T Consensus       686 ~~~~v~s~ee~~~~~~~igyP-vIVKP~~~~Gg  717 (1050)
T TIGR01369       686 KWKTATSVEEAVEFASEIGYP-VLVRPSYVLGG  717 (1050)
T ss_pred             CeEEECCHHHHHHHHHhcCCC-EEEEECCCCCC
Confidence            443333444445555554434 67899776654

In several thermophilic species (Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Aquifex aeolicus), the large subunit appears split, at different points, into two separate genes.

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=95.47  E-value=0.074  Score=42.78  Aligned_cols=69  Identities=23%  Similarity=0.313  Sum_probs=43.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCce-EEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYD-VAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ++|.|.| .|.||..+++.+.+.--. ++ +...+|+.++...+....+..      +.   .++.+.+.   ++|.|+-
T Consensus         1 l~vgiVG-cGaIG~~l~e~v~~~~~~-~e~v~v~D~~~ek~~~~~~~~~~~------~~---s~ide~~~---~~DlvVE   66 (255)
T COG1712           1 LKVGIVG-CGAIGKFLLELVRDGRVD-FELVAVYDRDEEKAKELEASVGRR------CV---SDIDELIA---EVDLVVE   66 (255)
T ss_pred             CeEEEEe-ccHHHHHHHHHHhcCCcc-eeEEEEecCCHHHHHHHHhhcCCC------cc---ccHHHHhh---ccceeee
Confidence            4689999 899999999977754222 45 445556666666555543322      11   23445554   7888888


Q ss_pred             CCCc
Q 020880           83 CAAL   86 (320)
Q Consensus        83 ~a~~   86 (320)
                      ||+.
T Consensus        67 aAS~   70 (255)
T COG1712          67 AASP   70 (255)
T ss_pred             eCCH
Confidence            8874

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.47  E-value=0.063  Score=45.78  Aligned_cols=55  Identities=22%  Similarity=0.345  Sum_probs=43.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+|.|.|.+|.+|..++..|+++|   ++|+...|...                        ++.++.+   ++|+||
T Consensus       158 ~Gk~V~vIG~s~ivG~PmA~~L~~~g---atVtv~~~~t~------------------------~l~e~~~---~ADIVI  207 (301)
T PRK14194        158 TGKHAVVIGRSNIVGKPMAALLLQAH---CSVTVVHSRST------------------------DAKALCR---QADIVV  207 (301)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCC---CEEEEECCCCC------------------------CHHHHHh---cCCEEE
Confidence            47899999999999999999999999   78876655421                        2445555   789998


Q ss_pred             ECCCc
Q 020880           82 NCAAL   86 (320)
Q Consensus        82 h~a~~   86 (320)
                      -+.|.
T Consensus       208 savg~  212 (301)
T PRK14194        208 AAVGR  212 (301)
T ss_pred             EecCC
Confidence            87764

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.45  E-value=0.039  Score=46.02  Aligned_cols=71  Identities=15%  Similarity=0.287  Sum_probs=44.7

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCce-EEEecCC-CCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYD-VAATHHS-TPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~-v~~~~r~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      |.++||.|.| +|.+|+.++..|++.|....+ ++...|+ +++.+.+...++  +.     ..  .+..++++   ++|
T Consensus         2 m~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~-----~~--~~~~~~~~---~~D   68 (245)
T PRK07634          2 LKKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYN--VS-----TT--TDWKQHVT---SVD   68 (245)
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcC--cE-----Ee--CChHHHHh---cCC
Confidence            3368999999 799999999999988631133 6666665 334444433322  21     11  12344555   789


Q ss_pred             EEEECC
Q 020880           79 VVVNCA   84 (320)
Q Consensus        79 ~Vih~a   84 (320)
                      +||.+.
T Consensus        69 iViiav   74 (245)
T PRK07634         69 TIVLAM   74 (245)
T ss_pred             EEEEec
Confidence            999875

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=95.44  E-value=0.053  Score=47.03  Aligned_cols=67  Identities=16%  Similarity=0.207  Sum_probs=52.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      |++|.|+| .|.+|+.++..-..-|   ++|+.+.-.++.......     -..+.++..|++.++++.+   +||+|=
T Consensus         1 ~~tvgIlG-GGQLgrMm~~aa~~lG---~~v~vLdp~~~~PA~~va-----~~~i~~~~dD~~al~ela~---~~DViT   67 (375)
T COG0026           1 MKTVGILG-GGQLGRMMALAAARLG---IKVIVLDPDADAPAAQVA-----DRVIVAAYDDPEALRELAA---KCDVIT   67 (375)
T ss_pred             CCeEEEEc-CcHHHHHHHHHHHhcC---CEEEEecCCCCCchhhcc-----cceeecCCCCHHHHHHHHh---hCCEEE
Confidence            57899999 6999999999999999   888888866554332222     1236778889999999888   788875

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.41  E-value=0.037  Score=47.17  Aligned_cols=71  Identities=14%  Similarity=0.172  Sum_probs=46.4

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhcc-CCCceEEEecCCCC-ChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIE-GKPYDVAATHHSTP-LPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g-~~v~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      |+.|+|.+.| +|-+|+.+++.|+++| ...++|+...|+++ ....+...++  +..     .  .+..++.+   ++|
T Consensus         1 ~~~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g--~~~-----~--~~~~e~~~---~aD   67 (279)
T PRK07679          1 MSIQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYG--VKG-----T--HNKKELLT---DAN   67 (279)
T ss_pred             CCCCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcC--ceE-----e--CCHHHHHh---cCC
Confidence            7788999999 8999999999999987 12257787888653 3333333221  221     1  12334444   789


Q ss_pred             EEEECC
Q 020880           79 VVVNCA   84 (320)
Q Consensus        79 ~Vih~a   84 (320)
                      +||-+.
T Consensus        68 vVilav   73 (279)
T PRK07679         68 ILFLAM   73 (279)
T ss_pred             EEEEEe
Confidence            988764

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.37  E-value=0.13  Score=44.48  Aligned_cols=76  Identities=18%  Similarity=0.076  Sum_probs=49.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      ..+++|+|++|-+|..+++.+...|   .+|+.+.++.++...+ ...+  +. ...+....+....+.+..  .++|.+
T Consensus       145 ~~~vli~g~~~~~g~~~~~~~~~~g---~~v~~~~~~~~~~~~~-~~~g--~~-~~~~~~~~~~~~~~~~~~~~~~~d~v  217 (328)
T cd08268         145 GDSVLITAASSSVGLAAIQIANAAG---ATVIATTRTSEKRDAL-LALG--AA-HVIVTDEEDLVAEVLRITGGKGVDVV  217 (328)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcC---CEEEEEcCCHHHHHHH-HHcC--CC-EEEecCCccHHHHHHHHhCCCCceEE
Confidence            4589999999999999999999999   8888888876554444 2222  11 122333322222222222  259999


Q ss_pred             EECCC
Q 020880           81 VNCAA   85 (320)
Q Consensus        81 ih~a~   85 (320)
                      +++++
T Consensus       218 i~~~~  222 (328)
T cd08268         218 FDPVG  222 (328)
T ss_pred             EECCc
Confidence            99876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.37  E-value=0.049  Score=47.16  Aligned_cols=34  Identities=21%  Similarity=0.198  Sum_probs=30.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      .|+|.|.| +|-+|+.++..|.+.|   ++|....|+.
T Consensus         4 ~m~I~iiG-~G~~G~~lA~~l~~~G---~~V~~~~r~~   37 (308)
T PRK14619          4 PKTIAILG-AGAWGSTLAGLASANG---HRVRVWSRRS   37 (308)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCC---CEEEEEeCCC
Confidence            57899998 7999999999999999   7888888874

>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed

Probab=95.36  E-value=0.057  Score=54.91  Aligned_cols=74  Identities=20%  Similarity=0.220  Sum_probs=47.5

Q ss_pred             CcEEEEEcCCCh-hhH---------HHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH
Q 020880            3 KKRVLVVGGTGY-LGQ---------HLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         3 ~~~ilItGatG~-IG~---------~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      ++||+|+|+..+ ||+         ++++.|.+.|   ++|+.+..+++....-.. ..+.   +..+..+.+.+.++++
T Consensus       554 ~kkvlilG~G~~~ig~~~efdy~~v~~i~alk~~G---~~vi~v~~npetvs~~~~-~aD~---~y~e~~~~e~v~~i~~  626 (1066)
T PRK05294        554 RKKVLVLGSGPNRIGQGIEFDYCCVHAVLALREAG---YETIMVNCNPETVSTDYD-TSDR---LYFEPLTLEDVLEIIE  626 (1066)
T ss_pred             CceEEEECccccccccccccchhHHHHHHHHHHCC---CEEEEEeCCccccccccc-hhhh---eeecCCCHHHHHHHHH
Confidence            689999997765 664         5699999999   888888877654211000 0011   1224445566777776


Q ss_pred             HhCCCCEEEECC
Q 020880           73 KFGQPDVVVNCA   84 (320)
Q Consensus        73 ~~~~~d~Vih~a   84 (320)
                      .. ++|.|+-..
T Consensus       627 ~e-~~dgVi~~~  637 (1066)
T PRK05294        627 KE-KPKGVIVQF  637 (1066)
T ss_pred             Hc-CCCEEEEEe
Confidence            64 899888643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	320
2ydx_A	315	Crystal Structure Of Human S-Adenosylmethionine Syn		1e-26
2ydy_A	315	Crystal Structure Of Human S-Adenosylmethionine Syn		4e-25
2ggs_A	273	Crystal Structure Of Hypothetical Dtdp-4-Dehydrorha		1e-14
1kbz_A	299	Crystal Structure Of Apo-dtdp-6-deoxy-l-lyxo-4-hexu		7e-12
3sc6_A	287	2.65 Angstrom Resolution Crystal Structure Of Dtdp-		1e-11
1vl0_A	292	Crystal Structure Of A Dtdp-4-Dehydrorhamnose Reduc		1e-09
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		2e-09
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		3e-08
2hun_A	336	Crystal Structure Of Hypothetical Protein Ph0414 Fr		8e-07
1bxk_A	355	Dtdp-Glucose 4,6-Dehydratase From E. Coli Length =		1e-06
2c20_A	330	Crystal Structure Of Udp-Glucose 4-Epimerase Length		1e-06
2p5u_A	311	Crystal Structure Of Thermus Thermophilus Hb8 Udp-G		6e-05
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		1e-04
1z45_A	699	Crystal Structure Of The Gal10 Fusion Protein Galac		3e-04

>pdb|2YDX|A Chain A, Crystal Structure Of Human S-Adenosylmethionine Synthetase 2, Beta Subunit Length = 315

Iteration: 1
 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           +RVLV G TG LG+ + +   E +   +           P+           F  V+L  
Sbjct: 3   RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 48
Query: 64  GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
            +    +   F QP V+V+CAA   P V EN PD+A  +NV +S    L+         L
Sbjct: 49  SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 105
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
           I++S+D V++G    Y+EED  AP+N+YGK+K+  EK + E     A+LR  I+YG   +
Sbjct: 106 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 163
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
             + +S      D V    +     H + R P +V+DV  +   L  + +  D  ++   
Sbjct: 164 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 222
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
           +  G +++++ +MA  +A+     +S ++P++ S V  G Q P +  +D +KL +TL I 
Sbjct: 223 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 280
Query: 304 PVT-YKDGVKLTL 315
             T ++ G+K +L
Sbjct: 281 QRTPFRIGIKESL 293

>pdb|2YDY|A Chain A, Crystal Structure Of Human S-Adenosylmethionine Synthetase 2, Beta Subunit In Orthorhombic Crystal Form Length = 315

Iteration: 1
 Score =  112 bits (279), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 151/313 (48%), Gaps = 23/313 (7%)
Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           +RVLV G TG LG+ + +   E +   +           P+           F  V+L  
Sbjct: 3   RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 48
Query: 64  GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
            +    +   F QP V+V+CAA   P V EN PD+A  +NV +S    L+         L
Sbjct: 49  SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 105
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
           I++S+D V++G    Y+EED  AP+N+YGK+K+  EK + E     A+LR  I+YG   +
Sbjct: 106 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 163
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
             + +S      D V    +     H + R P +V+DV  +   L  +    D  ++   
Sbjct: 164 EKLEESAVTVXFDKVQFSNKSANXDHWQQRFPTHVKDVATVCRQLAEK-RXLDPSIKGTF 222
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
           +  G ++ ++ + A  +A+     +S ++P++ S V  G Q P +  +D +KL +TL I 
Sbjct: 223 HWSGNEQXTKYEXACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 280
Query: 304 PVT-YKDGVKLTL 315
             T ++ G+K +L
Sbjct: 281 QRTPFRIGIKESL 293

>pdb|2GGS|A Chain A, Crystal Structure Of Hypothetical Dtdp-4-Dehydrorhamnose Reductase From Sulfolobus Tokodaii Length = 273

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 141/306 (46%), Gaps = 46/306 (15%)
Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
           R L+ G +G LG  L + LSE     ++V   ++S+ +              + +DL   
Sbjct: 2   RTLITGASGQLGIELSRLLSE----RHEVIKVYNSSEIQG-----------GYKLDLTDF 46
Query: 65  SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
              +   +K  +PDV++N AA++    CE + + A  IN  +  V  +    +  ++ ++
Sbjct: 47  PRLEDFIIK-KRPDVIINAAAMTDVDKCEIEKEKAYKINAEA--VRHIVRAGKVIDSYIV 103
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
           H+STD V++G K  YKEED   P+N YG SK+  E F  +  S   I+R+S I+      
Sbjct: 104 HISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQDDS--LIIRTSGIFR----- 156
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
              K  PI ++   L +G+ V F       P+  R +   IL L       + +   +++
Sbjct: 157 --NKGFPI-YVYKTLKEGKTV-FAFKGYYSPISARKLASAILELL------ELRKTGIIH 206
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD--RG--VQSPADISMDITKLVQTL 300
           V G +R+SR ++A  + E          P     VD  RG   + P D S+D ++  + L
Sbjct: 207 VAG-ERISRFELALKIKE------KFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKIL 259
Query: 301 NIDPVT 306
           + D  T
Sbjct: 260 STDFYT 265

>pdb|1KBZ|A Chain A, Crystal Structure Of Apo-dtdp-6-deoxy-l-lyxo-4-hexulose Reductase (rmld) From Salmonella Enterica Serovar Typhimurium Length = 299

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 24/175 (13%)
Query: 6   VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL-LDALPHSFVFFDVDLKSG 64
           +L+ G TG +G  L + L+                P+  L+ LD   HS  F   D  + 
Sbjct: 3   ILLFGKTGQVGWELQRSLA----------------PVGNLIALDV--HSKEFCG-DFSNP 43
Query: 65  SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
            G      K  +PDV+VN AA +     E++P+ A  +N  S  V  ++         ++
Sbjct: 44  KGVAETVRKL-RPDVIVNAAAHTAVDKAESEPELAQLLNATS--VEAIAKAANETGAWVV 100
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
           H STD V+ G     ++E D  +P+NVYGK+K+A EK + + C    I R+S +Y
Sbjct: 101 HYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVY 155

>pdb|3SC6|A Chain A, 2.65 Angstrom Resolution Crystal Structure Of Dtdp-4-Dehydrorhamnose Reductase (Rfbd) From Bacillus Anthracis Str. Ames In Complex With Nadp Length = 287

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 3   KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
           K+RV++ G  G LG+ L +   E+  + YD+       P  + LLD            + 
Sbjct: 5   KERVIITGANGQLGKQLQE---ELNPEEYDI------YPFDKKLLD------------IT 43
Query: 63  SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
           + S    V  +  +P ++++CAA +     E + D A  IN + +  V   S     K  
Sbjct: 44  NISQVQQVVQEI-RPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAK-- 100
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
            L+++STD V++G +   Y E    AP+N+YG SK A E+F+ E  + + I+R+S +YG 
Sbjct: 101 -LVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 159
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
              + V   + +        + E++    D+   P YV D+  +I  L
Sbjct: 160 YGNNFVKTMIRLG------KEREEISVVADQIGSPTYVADLNVMINKL 201

>pdb|1VL0|A Chain A, Crystal Structure Of A Dtdp-4-Dehydrorhamnose Reductase, Rfbd Ortholog (Ca_c2315) From Clostridium Acetobutylicum Atcc 824 At 2.05 A Resolution Length = 292

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 20/159 (12%)
Query: 76  QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYE 133
           +P+VV+NCAA +    CE   D A  IN   P +L    ++++   E  ++ +STD V++
Sbjct: 63  KPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLA--AAAYSVGAE--IVQISTDYVFD 118
Query: 134 G-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPI 192
           G  K    E DE+ P + YGK+K+  E F+      + I+R++ +YG             
Sbjct: 119 GEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGN---------- 168
Query: 193 QWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL 228
            ++ + ++ G   ++++  HD+   P    D+ +++L +
Sbjct: 169 NFVKTXINLGKTHDELKVVHDQVGTPTSTVDLARVVLKV 207

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 142/325 (43%), Gaps = 39/325 (12%)
Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
           R++V GG G++G HL+  L E+    Y+V    + +   +  ++      V    D   G
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELG---YEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWG 58
Query: 65  SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
           +G         + DVV + AA    R+   +P    + NV ++  N L    +     ++
Sbjct: 59  AGI--------KGDVVFHFAANPEVRLSTTEPIVHFNENVVATF-NVLEWARQTGVRTVV 109
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAIL--------RSS 175
             S+  VY         EE+   P++VYG +K A E      C+ +A L        R +
Sbjct: 110 FASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVM----CATYARLFGVRCLAVRYA 165
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRWL 233
            + GP+    +   +   +I  +      +E   D  + +  +YVRD V+  LA   ++ 
Sbjct: 166 NVVGPR----LRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFE 221
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI---S 290
             D    L LNVG  D V  + +A++VAE+ G     I+ V ++   RG   P D+   +
Sbjct: 222 EMDAPF-LALNVGNVDAVRVLDIAQIVAEVLGLRPE-IRLVPSTPDGRG--WPGDVKYMT 277
Query: 291 MDITKLVQTLNIDP-VTYKDGVKLT 314
           + +TKL++     P +T  + VK T
Sbjct: 278 LAVTKLMKLTGWRPTMTSAEAVKKT 302

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 140/326 (42%), Gaps = 45/326 (13%)
Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLDALPHSFVFFDVDLKS 63
           R++V GG G++G HL+  L E+  +   V      T    +L +  L         D   
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVVDIVQRDTGGSAELHVRDLK--------DYSW 53
Query: 64  GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
           G+G         + DVV + AA    R+   +P    + NV ++  N L    +     +
Sbjct: 54  GAGI--------KGDVVFHFAANPEVRLSTTEPIVHFNENVVATF-NVLEWARQTGVRTV 104
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAIL--------RS 174
           +  S+  VY         EE+   P++VYG +K A E      C+ +A L        R 
Sbjct: 105 VFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVM----CATYARLFGVRCLAVRY 160
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRW 232
           + + GP+    +   +   +I  +      +E   D  + +  +YVRD V+  LA   ++
Sbjct: 161 ANVVGPR----LRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKF 216
Query: 233 LSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI--- 289
              D    L LNVG  D V  + +A++VAE+ G     I+ V ++   RG   P D+   
Sbjct: 217 EEMDAPF-LALNVGNVDAVRVLDIAQIVAEVLGLRPE-IRLVPSTPDGRG--WPGDVKYM 272
Query: 290 SMDITKLVQTLNIDP-VTYKDGVKLT 314
           ++ +TKL++     P +T  + VK T
Sbjct: 273 TLAVTKLMKLTGWRPTMTSAEAVKKT 298

>pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 150/332 (45%), Gaps = 41/332 (12%)
Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKP-YDV----AATHHSTPLPQLLLDALP-HSF 54
           M   ++LV GG G++G + ++ +  +E  P ++V       + S P     L+  P ++F
Sbjct: 1   MHSMKLLVTGGMGFIGSNFIRYI--LEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTF 58
Query: 55  VFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSS 114
           V  DV     + ++ V     + D VV+ AA S      + P+  +  NV  +     S 
Sbjct: 59  VKGDV-----ADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESI 113
Query: 115 FTENKENLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCSNF-- 169
             EN E   +H+STD+VY  + K  + E D + P + Y  +K A++  +  + +  N   
Sbjct: 114 RRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNLNA 173
Query: 170 AILRSSIIYGPQTISP--VPKSLPIQWIDSVLSKGEKVEFF--HDECRCPVYVRDVVKII 225
           +I R +  YGP       +PK++    I + L  G K+  +      R  +YV D V+ I
Sbjct: 174 SITRCTNNYGPYQFPEKLIPKTI----IRASL--GLKIPIYGTGKNVRDWLYVEDHVRAI 227
Query: 226 -LALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQ 284
            L L      E ++   + N+   +  + +++ +++  + G    LI+ V     DR   
Sbjct: 228 ELVLLK---GESRE---IYNISAGEEKTNLEVVKIILRLMGKGEELIELVE----DRPGH 277
Query: 285 SPADISMDITKLVQTLNIDP-VTYKDGVKLTL 315
                S+D  K+ + L   P  T+ +G+K T+
Sbjct: 278 D-LRYSLDSWKITRDLKWRPKYTFDEGIKKTI 308

>pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 118/276 (42%), Gaps = 24/276 (8%)
Query: 4   KRVLVVGGTGYLGQHLLQG-LSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
           +++L+ GG G++G  L++  ++E       V    ++  L  L   A    F F  VD+ 
Sbjct: 2   RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDIC 61
Query: 63  SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLV------NWLSSFT 116
             +    V  +  QPD V++ AA S      + P + +  N+  +         + ++ T
Sbjct: 62  DRAELARVFTEH-QPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALT 120
Query: 117 ENKENLLI--HLSTDQVYEGVKS---FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA- 170
           E+K++     H+STD+VY  + S   F+ E    AP + Y  SK +++  +      +  
Sbjct: 121 EDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL 180
Query: 171 ---ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA 227
              I   S  YGP       K +P+  ++++  K   V     + R  +YV D  + +  
Sbjct: 181 PTLITNCSNNYGPYHFP--EKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYC 238
Query: 228 LTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEI 263
                ++   ++    N+GG +    + + E + E+
Sbjct: 239 -----VATTGKVGETYNIGGHNERKNLDVVETICEL 269

>pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 129/322 (40%), Gaps = 43/322 (13%)
Query: 6   VLVVGGTGYLGQHLLQGLSEIEGKPY---DVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
           +L+ GG GY+G H ++ L + EG      D   T H         DA+     F++ DL+
Sbjct: 4   ILICGGAGYIGSHAVKKLVD-EGLSVVVVDNLQTGHE--------DAITEGAKFYNGDLR 54
Query: 63  SGSGFDAVALKFGQPDV--VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
             +    V   F Q ++  V++ AA S+  V    P    + NV  +L   L    E K 
Sbjct: 55  DKAFLRDV---FTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALC-LLEVMDEFKV 110
Query: 121 NLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCSN--FAILRSS 175
           +  I  ST   Y  V      EE    P N YG++K+A EK +  Y + SN  + I R  
Sbjct: 111 DKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYF 170
Query: 176 IIYG--PQTI-----SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP--VYVRDVVKIIL 226
            + G  P  I      P    +P+  +   L + EK+  F D+   P    +RD + +  
Sbjct: 171 NVAGATPNGIIGEDHRPETHLIPLV-LQVALGQREKIMMFGDDYNTPDGTCIRDYIHVED 229
Query: 227 ALTNRWLS----EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRG 282
            +   +L     ++       N+G  +  S  ++ + V E+  +       + A    R 
Sbjct: 230 LVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHE------IPAEVAPRR 283
Query: 283 VQSPADISMDITKLVQTLNIDP 304
              PA +     K  + L  DP
Sbjct: 284 AGDPARLVASSQKAKEKLGWDP 305

>pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 138/326 (42%), Gaps = 38/326 (11%)
Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
           RVLV GG G++G H+++   ++  +  +VA   +   L     + +P    FF VDL+  
Sbjct: 2   RVLVTGGAGFIGSHIVE---DLLARGLEVAVLDN---LATGKRENVPKGVPFFRVDLRDK 55
Query: 65  SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
            G +    +F +P  V + AA +  +V   DP     +N+   L    +      E L+ 
Sbjct: 56  EGVERAFREF-RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVF 114
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPV--NVYGKSKVAAEKFIYEKCSNFAI----LRSSIIY 178
             +   +Y  V    + E+   P   + Y  SK A E ++     ++ +    LR   +Y
Sbjct: 115 ASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVY 174
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFF-----HDE--CRCPVYVRDVVKI-ILALTN 230
           GP+        +   + + VL KG  V  +      DE   R  VYV DV +   LAL +
Sbjct: 175 GPRQDPHGEAGVVAIFAERVL-KGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFS 233
Query: 231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLI-KPVSASSVDRGVQSPADI 289
                   ++ + NVG  +  +  ++   VAE  G +  +   P     ++R V SP   
Sbjct: 234 --------LEGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSP--- 282
Query: 290 SMDITKLVQTLNIDPVTYKDGVKLTL 315
                KL+       V +++G++LT+
Sbjct: 283 ----LKLMAHGWRPKVGFQEGIRLTV 304

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 115/272 (42%), Gaps = 34/272 (12%)
Query: 6   VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
           ++V GG G++G H++  LSE       V   + S+   + + +A          DL +  
Sbjct: 4   IVVTGGAGFIGSHVVDKLSE---SNEIVVIDNLSSGNEEFVNEAAR----LVKADLAA-- 54
Query: 66  GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
             D +       + V + AA    R+   +PD     NV ++    L +  +   + ++ 
Sbjct: 55  --DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATY-RLLEAMRKAGVSRIVF 111
Query: 126 LSTDQVYEGVKSFYKEEDE-IAPVNVYGKSKVAAEKFIYEKCSNFA----ILRSSIIYGP 180
            ST  VY   K     ED    P+++YG SK+A E  I   C  F     I R + + G 
Sbjct: 112 TSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGR 171
Query: 181 QTISPVPKSLPIQWIDS-----VLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
           ++   V     ++   +     +L  GE+ + +       +Y+ D V  +L      L  
Sbjct: 172 RSTHGVIYDFIMKLKRNPEELEILGNGEQNKSY-------IYISDCVDAMLF----GLRG 220
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYS 267
           D+++  + N+G  D++   ++AE+V E  G S
Sbjct: 221 DERVN-IFNIGSEDQIKVKRIAEIVCEELGLS 251

>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 99/254 (38%), Gaps = 41/254 (16%)
Query: 2   SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVA-------ATHHSTPLPQLLLDALPHSF 54
           + K VLV GG GY+G H +  L E     YD         +T+ S    ++L     H  
Sbjct: 10  TSKIVLVTGGAGYIGSHTVVELIE---NGYDCVVADNLSNSTYDSVARLEVLTK---HHI 63
Query: 55  VFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSS 114
            F++VDL    G + V  ++ + D V++ A L         P      N+  ++V  L  
Sbjct: 64  PFYEVDLCDRKGLEKVFKEY-KIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVV-LLEL 121
Query: 115 FTENKENLLIHLSTDQVYEGVKSF-----YKEEDEIAPVNVYGKSKVAAEKFIYE----- 164
             +   +  +  S+  VY     F       EE  + P N YG +K A E  + +     
Sbjct: 122 MQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD 181
Query: 165 -KCSNFAILRSSIIYGPQTISP----------VPKSLPIQWIDSVLSKGEKVEFFHD--E 211
            K   FAILR    + P    P          +P +L        + + EK+  F D  +
Sbjct: 182 KKSWKFAILR---YFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYD 238
Query: 212 CRCPVYVRDVVKII 225
            R    +RD + ++
Sbjct: 239 SRDGTPIRDYIHVV 252

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	320
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	3e-46
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	2e-38
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	7e-28
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	2e-27
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	5e-26
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	1e-22
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	5e-22
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	5e-22
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	1e-21
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	5e-20
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	1e-19
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	3e-19
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	4e-19
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	7e-19
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	9e-18
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	4e-17
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	4e-16
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	4e-16
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	4e-16
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	1e-15
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	1e-15
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	3e-15
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	4e-15
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	6e-14
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	5e-13
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	1e-12
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	1e-12
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-11
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	1e-10
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	3e-09
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	2e-08
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	4e-08
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	1e-07
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	2e-07
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	3e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-07
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	1e-06
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	1e-06
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	2e-06
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	5e-06
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	9e-06
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	1e-05
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	2e-05
1xq6_A	253	Unknown protein; structural genomics, protein stru	2e-05
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	2e-05
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	3e-05
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	4e-05
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	7e-05
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	7e-05
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	1e-04
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	2e-04
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	3e-04
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	3e-04
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	3e-04
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	4e-04
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	5e-04
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	6e-04

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315

 Score =  157 bits (400), Expect = 3e-46
 Identities = 85/319 (26%), Positives = 149/319 (46%), Gaps = 26/319 (8%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
           M+++ VLV G TG LG+ + +   +     +           P+              V+
Sbjct: 1   MNRR-VLVTGATGLLGRAVHKEFQQ---NNWHAVGCGFRRARPKFE-----------QVN 45

Query: 61  LKSGSGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
           L      +AV   +   QP V+V+CAA   P V EN PD+A  +NV +     L+     
Sbjct: 46  L---LDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDA--SGNLAKEAAA 100

Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
               LI++S+D V++G    Y+EED  AP+N+YGK+K+  EK + E     A+LR  I+Y
Sbjct: 101 VGAFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILY 160

Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
           G   +  + +S      D V    +     H + R P +V+DV  +   L  + +  D  
Sbjct: 161 GE--VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPS 217

Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
           ++   +  G +++++ +MA  +A+     +S ++P++ S V  G Q P +  +D +KL  
Sbjct: 218 IKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKLET 276

Query: 299 TLNIDPVTYKDGVKLTLAA 317
                   ++ G+K +L  
Sbjct: 277 LGIGQRTPFRIGIKESLWP 295

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273

 Score =  136 bits (344), Expect = 2e-38
 Identities = 75/303 (24%), Positives = 129/303 (42%), Gaps = 44/303 (14%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
           R L+ G +G LG  L + LSE   +   +   + S       LD            L   
Sbjct: 2   RTLITGASGQLGIELSRLLSE---RHEVIKVYNSSEIQGGYKLD------------LTDF 46

Query: 65  SGFDAVALKFGQPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
              +   +K  +PDV++N AA+  V + CE + + A  IN  +  V  +    +  ++ +
Sbjct: 47  PRLEDFIIKK-RPDVIINAAAMTDVDK-CEIEKEKAYKINAEA--VRHIVRAGKVIDSYI 102

Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
           +H+STD V++G K  YKEED   P+N YG SK+  E F      +  I+R+S I+  +  
Sbjct: 103 VHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFA--LQDDSLIIRTSGIFRNKGF 160

Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
                     ++   L +G+ V  F      P+  R +   IL L     +       ++
Sbjct: 161 --------PIYVYKTLKEGKTVFAF-KGYYSPISARKLASAILELLELRKTG------II 205

Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSA--SSVDRGVQSPADISMDITKLVQTLN 301
           +V G +R+SR ++A  + E       + +          R    P D S+D ++  + L+
Sbjct: 206 HVAG-ERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKR----PYDSSLDSSRARKILS 260

Query: 302 IDP 304
            D 
Sbjct: 261 TDF 263

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287

 Score =  108 bits (273), Expect = 7e-28
 Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 37/185 (20%)

Query: 3   KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV--- 59
           K+RV++ G  G LG+ L                        Q  L+   +    FD    
Sbjct: 5   KERVIITGANGQLGKQL------------------------QEELNPEEYDIYPFDKKLL 40

Query: 60  DLKSGSGFDAV--ALKFGQPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
           D+   +    V   ++  +P ++++CAA   V +  E + D A  IN        ++  +
Sbjct: 41  DI---TNISQVQQVVQEIRPHIIIHCAAYTKVDQ-AEKERDLAYVINAIG--ARNVAVAS 94

Query: 117 ENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
           +     L+++STD V++G +   Y E    AP+N+YG SK A E+F+ E  + + I+R+S
Sbjct: 95  QLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTS 154

Query: 176 IIYGP 180
            +YG 
Sbjct: 155 WLYGK 159

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292

 Score =  107 bits (270), Expect = 2e-27
 Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 37/183 (20%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV---DL 61
           ++L+ G  G LG+ +                        Q  L       +  DV   D+
Sbjct: 14  KILITGANGQLGREI------------------------QKQLKGKNVEVIPTDVQDLDI 49

Query: 62  KSGSGFDAV--ALKFGQPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
              +   AV       +P+VV+NCAA  +V + CE   D A  IN        L++   +
Sbjct: 50  ---TNVLAVNKFFNEKKPNVVINCAAHTAVDK-CEEQYDLAYKINAIG--PKNLAAAAYS 103

Query: 119 KENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
               ++ +STD V++G       E DE+ P + YGK+K+  E F+      + I+R++ +
Sbjct: 104 VGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWL 163

Query: 178 YGP 180
           YG 
Sbjct: 164 YGD 166

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* Length = 299

 Score =  103 bits (260), Expect = 5e-26
 Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 28/180 (15%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
            +L+ G TG +G  L + L+        +A   HS        +                
Sbjct: 2   NILLFGKTGQVGWELQRSLAP---VGNLIALDVHSKEFCGDFSNP--------------- 43

Query: 65  SGFDAV--ALKFGQPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
                V   ++  +PDV+VN AA  +V +  E++P+ A  +N  S  V  ++        
Sbjct: 44  ---KGVAETVRKLRPDVIVNAAAHTAVDK-AESEPELAQLLNATS--VEAIAKAANETGA 97

Query: 122 LLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
            ++H STD V+ G     ++E D  +P+NVYGK+K+A EK + + C    I R+S +Y  
Sbjct: 98  WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAG 157

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 94.9 bits (237), Expect = 1e-22
 Identities = 79/328 (24%), Positives = 130/328 (39%), Gaps = 45/328 (13%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVA-----ATHHSTPLPQLLLDALPHSFVFFDV 59
           R++V GG G++G HL+  L E  G  Y+V      ++           + +  S      
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVE-LG--YEVVVVDNLSSGR--------REFVNPSAELHVR 50

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
           DLK     D       + DVV + AA    R+   +P    + NV ++  N L    +  
Sbjct: 51  DLK-----DYSWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATF-NVLEWARQTG 104

Query: 120 ENLLIHLSTDQVY-EGVKSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCSNF--AILRS 174
              ++  S+  VY +       EE+   P++VYG +K A E     Y +        +R 
Sbjct: 105 VRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRY 164

Query: 175 SIIYGP-QTISPVPKSLPIQWIDSVLSKGEKVEFFHD-EC-RCPVYVRDVVK-IILALTN 230
           + + GP      +       +I  +      +E   D    +  +YVRD V+  + A   
Sbjct: 165 ANVVGPRLRHGVIYD-----FIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWK- 218

Query: 231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADIS 290
               E     L LNVG  D V  + +A++VAE+ G      +     S   G   P D+ 
Sbjct: 219 -KFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLR---PEIRLVPSTPDGRGWPGDVK 274

Query: 291 ---MDITKLVQTLNIDP-VTYKDGVKLT 314
              + +TKL++     P +T  + VK T
Sbjct: 275 YMTLAVTKLMKLTGWRPTMTSAEAVKKT 302

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 93.9 bits (234), Expect = 5e-22
 Identities = 60/332 (18%), Positives = 117/332 (35%), Gaps = 38/332 (11%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAA-----THHSTPLPQLLLDALPHSFV 55
           +  + +L+ GG G++G +L     E       V       ++      +        + +
Sbjct: 8   LENQTILITGGAGFVGSNLAFHFQE-NHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLI 66

Query: 56  FFDVDLKSGSGFDAVALK---FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWL 112
            F  ++ +    + + L+       D + + AA+S       + +  M  N  + L N L
Sbjct: 67  GFKGEVIAADINNPLDLRRLEKLHFDYLFHQAAVS--DTTMLNQELVMKTNYQAFL-NLL 123

Query: 113 SSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF--A 170
                 K  + I+ S+  VY   K+        +P NVYG SK+  ++F+    ++    
Sbjct: 124 EIARSKKAKV-IYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQV 182

Query: 171 ILRSSIIYGP-QTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILA 227
            LR   +YGP +       S+ +Q     +   ++V+ F    + R  VY+ DV++  + 
Sbjct: 183 GLRYFNVYGPREFYKEKTASMVLQLALGAM-AFKEVKLFEFGEQLRDFVYIEDVIQANVK 241

Query: 228 LTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPA 287
                 S       + NVG     S  ++  ++ E  G                      
Sbjct: 242 AMKAQKSG------VYNVGYSQARSYNEIVSILKEHLGDFKVTYIKNPY---------AF 286

Query: 288 DISM---DITKLVQTLNIDP-VTYKDGVKLTL 315
                   I   +  L+  P    + G+K  L
Sbjct: 287 FQKHTQAHIEPTILDLDYTPLYDLESGIKDYL 318

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 93.2 bits (232), Expect = 5e-22
 Identities = 51/326 (15%), Positives = 112/326 (34%), Gaps = 41/326 (12%)

Query: 6   VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
           +LV G +G +G  L+  L+E  GK  +V A+                   F  +D+ +  
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGK-KNVIASDIVQR--------DTGGIKFITLDVSNRD 52

Query: 66  GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
             D    K+   D + + A +   +  E DP  A  +N+ +   N L +  +++   ++ 
Sbjct: 53  EIDRAVEKYS-IDAIFHLAGILSAK-GEKDPALAYKVNM-NGTYNILEAAKQHRVEKVVI 109

Query: 126 LSTDQVY--EGVKSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCS--NFAILRSSIIYG 179
            ST  V+  E  K+         P  ++G +K+AAE     Y +    +   LR   I  
Sbjct: 110 PSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIIS 169

Query: 180 P-QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP-VYVRDVVK-IILALTNRWLSED 236
                +       ++     + + +   +       P +Y+ D +K ++         + 
Sbjct: 170 YKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEAD--RDK 227

Query: 237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI------S 290
             ++   NV           +E+ ++I+       + +    ++        I      S
Sbjct: 228 LVLRNGYNVTA----YTFTPSELYSKIK-------ERIPEFEIEYKEDFRDKIAATWPES 276

Query: 291 MDITKLVQTLNIDP-VTYKDGVKLTL 315
           +D ++                +   +
Sbjct: 277 LDSSEASNEWGFSIEYDLDRTIDDMI 302

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 92.2 bits (230), Expect = 1e-21
 Identities = 62/327 (18%), Positives = 123/327 (37%), Gaps = 47/327 (14%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVA-----ATHHSTPLPQLLLDALPHSFVFFD 58
             ++V GG G++G H++  L   E    ++      ++ +         + +  +     
Sbjct: 2   SLIVVTGGAGFIGSHVVDKL--SES--NEIVVIDNLSSGN--------EEFVNEAARLVK 49

Query: 59  VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
            DL +    D +       + V + AA    R+   +PD     NV ++    L +  + 
Sbjct: 50  ADLAA----DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATY-RLLEAMRKA 104

Query: 119 KENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFI--YEKCSNF--AILR 173
             + ++  ST  VY   K     E+    P+++YG SK+A E  I  Y    +    I R
Sbjct: 105 GVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYR 164

Query: 174 SSIIYGP-QTISPVPKSLPIQWIDSVLSKGEKVEFFHD-EC-RCPVYVRDVVK-IILALT 229
            + + G   T   +        I  +    E++E   + E  +  +Y+ D V  ++  L 
Sbjct: 165 FANVIGRRSTHGVIY---DF--IMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR 219

Query: 230 NRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI 289
                       + N+G  D++   ++AE+V E  G S    +                +
Sbjct: 220 GDERVN------IFNIGSEDQIKVKRIAEIVCEELGLS---PRFRFTGGDRGWKGDVPVM 270

Query: 290 SMDITKLVQTLNIDP-VTYKDGVKLTL 315
            + I KL + L   P    ++ V++ +
Sbjct: 271 LLSIEKL-KRLGWKPRYNSEEAVRMAV 296

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 87.6 bits (218), Expect = 5e-20
 Identities = 62/332 (18%), Positives = 120/332 (36%), Gaps = 57/332 (17%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFD 58
           MS K + V GGTG+LGQ++++ +   +G                ++L       +   ++
Sbjct: 1   MSLK-IAVTGGTGFLGQYVVESIKN-DG--NTP-----------IILTRSIGNKAINDYE 45

Query: 59  VDLKSGSGFDAVALKFGQPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
             +   +  D +       D VV+ AA             S    N      N   +  E
Sbjct: 46  YRVSDYTLEDLINQLND-VDAVVHLAATRGSQG-----KISEFHDNE-ILTQNLYDACYE 98

Query: 118 NKENLLIHLSTDQVY-EGVKSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCSNF--AIL 172
           N  + +++ ST   Y +     + E++   P  +YG SK+A E     Y +        L
Sbjct: 99  NNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNL 158

Query: 173 RSSIIYGP-QTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVK-IILAL 228
           R + +YG  +  + +   +   +       GE++    +    R  +Y +D  K +I AL
Sbjct: 159 RFAHLYGFNEKNNYM---INR-FFRQAF-HGEQLTLHANSVAKREFLYAKDAAKSVIYAL 213

Query: 229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPAD 288
               +S         N+G  D ++  ++A  +    G   +L+         +   +   
Sbjct: 214 KQEKVSG------TFNIGSGDALTNYEVANTINNAFGNKDNLLV--------KNPNANEG 259

Query: 289 I---SMDITKLVQTLNIDP-VTYKDGVKLTLA 316
           I    MD +K  + L+      +   V+    
Sbjct: 260 IHSSYMDSSKAKELLDFSTDYNFATAVEEIHL 291

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 86.9 bits (216), Expect = 1e-19
 Identities = 72/338 (21%), Positives = 127/338 (37%), Gaps = 39/338 (11%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVA-----ATHHSTPLPQLLLDALPHS-- 53
              K  L+ G  G++G +LL+ L +       V      AT H   L ++          
Sbjct: 25  AQPKVWLITGVAGFIGSNLLETLLK-LD--QKVVGLDNFATGHQRNLDEVRSLVSEKQWS 81

Query: 54  -FVFFDVDLKSGSGFDAVALKFGQPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLVNW 111
            F F   D+++    D         D V++ AAL SVPR    DP ++ + N+    +N 
Sbjct: 82  NFKFIQGDIRN---LDDCNNACAGVDYVLHQAALGSVPRSIN-DPITSNATNI-DGFLNM 136

Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEI-APVNVYGKSKVAAEKF--IYEKCSN 168
           L +  + K     + ++   Y       K ED I  P++ Y  +K   E +  ++ +C  
Sbjct: 137 LIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYG 196

Query: 169 F--AILRSSIIYGP-QTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVK 223
           F    LR   ++G  Q  +    ++  +W  S++ +G+ V    D    R   Y+ + V+
Sbjct: 197 FSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMI-QGDDVYINGDGETSRDFCYIENTVQ 255

Query: 224 -IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRG 282
             +LA T    +       + N+    R S  Q+   + +    +             R 
Sbjct: 256 ANLLAAT----AGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFR- 310

Query: 283 VQSPADI---SMDITKLVQTLNIDP-VTYKDGVKLTLA 316
                D+     DI+K  + L   P      GV L + 
Sbjct: 311 ---EGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMP 345

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 85.4 bits (212), Expect = 3e-19
 Identities = 58/337 (17%), Positives = 115/337 (34%), Gaps = 51/337 (15%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYD-VAATHHSTPLPQLLLDALPHSFVFFDV 59
           M+ K +L++G  G +G  L Q L ++ G   + V A+        ++     +S  F  V
Sbjct: 1   MNPK-ILIIGACGQIGTELTQKLRKLYG--TENVIASDIRKLNTDVV-----NSGPFEVV 52

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAA-LSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
           +    +  + +     +   +   AA LS     E +P  A  +N+ +SL + L+     
Sbjct: 53  NALDFNQIEHLVEVH-KITDIYLMAALLSA--TAEKNPAFAWDLNM-NSLFHVLNLAKAK 108

Query: 119 KENLLIHLSTDQVY-EGVKSFYKEEDEI-APVNVYGKSKVAAEKFI--YEKCSN--FAIL 172
           K   +   S+  V+          +  I  P  VYG SK A E++   Y          +
Sbjct: 109 KIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSI 168

Query: 173 RSSIIYGPQTISPVPKSLP--------IQWIDSVLSKGEKVEFFHD-ECRCP-VYVRDVV 222
           R   +           + P        +      +   +K E F   E + P +Y+ D +
Sbjct: 169 RYPGLIS-------WSTPPGGGTTDYAVDIFYKAI-ADKKYECFLSSETKMPMMYMDDAI 220

Query: 223 KIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRG 282
              +      + +    ++ ++             E+  EI+ +             D  
Sbjct: 221 DATIN-----IMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITY---EPDFR 272

Query: 283 VQSPADI---SMDITKLVQTLNIDP-VTYKDGVKLTL 315
            Q  AD    S+D ++  +  +       +   K  +
Sbjct: 273 -QKIADSWPASIDDSQAREDWDWKHTFDLESMTKDMI 308

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 85.8 bits (213), Expect = 4e-19
 Identities = 57/354 (16%), Positives = 107/354 (30%), Gaps = 69/354 (19%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--------PH 52
           ++   V+VVGG G++G +L++ L  +E     V            ++D L        P 
Sbjct: 30  LANTNVMVVGGAGFVGSNLVKRL--LELGVNQV-----------HVVDNLLSAEKINVPD 76

Query: 53  S--FVFFDVDLKSGSGFDAVALKFGQPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLV 109
                F +  +        +A    + D V + A           DP +    N  ++L 
Sbjct: 77  HPAVRFSETSITD---DALLASLQDEYDYVFHLATYHGNQSSIH-DPLADHENNTLTTL- 131

Query: 110 NWL-SSFTENKENLLIHLSTDQVYEGVKSFYKEEDE-------IAPVNVYGKSKVAAEK- 160
                     +   +++ +             +  E           + Y  SK+  E  
Sbjct: 132 KLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFY 191

Query: 161 -FIYEKCSNF--AILRSSIIYGP-----------QTISPVPKSLPIQWIDSVLSKGEKVE 206
              Y K         R   +YGP              +      P  +I   L KG  + 
Sbjct: 192 SVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPT-FIYKAL-KGMPLP 249

Query: 207 FFHD--ECRCPVYVRDVVK-IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEI 263
             +     R  ++V DV   +I    +           + N+      S   +A  + EI
Sbjct: 250 LENGGVATRDFIFVEDVANGLIACAADGTPGG------VYNIASGKETSIADLATKINEI 303

Query: 264 RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLA 316
            G + + +  +     D   +          K  + L     V+  DG++ T+ 
Sbjct: 304 TG-NNTELDRLPKRPWDNSGKRFGSPE----KARRELGFSADVSIDDGLRKTIE 352

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 85.0 bits (211), Expect = 7e-19
 Identities = 61/328 (18%), Positives = 112/328 (34%), Gaps = 32/328 (9%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDALPHSFVFFDV 59
           +  + ++V GG G++G ++++ L++ +G   D+    +       + L  L  +      
Sbjct: 44  IEGRMIIVTGGAGFIGSNIVKALND-KGI-TDILVVDNLKDGTKFVNLVDLNIADYMDKE 101

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
           D            +FG  + + +  A S     E D    M  N   S    L    E +
Sbjct: 102 DFLI---QIMAGEEFGDVEAIFHEGACS--STTEWDGKYMMDNNYQYSK-ELLHYCLERE 155

Query: 120 ENLLIHLSTDQVY-EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF----AILRS 174
               ++ S+   Y      F +  +   P+NV+G SK   ++++ +            R 
Sbjct: 156 IPF-LYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRY 214

Query: 175 SIIYGP-QTISPVPKSLPIQWIDSVLSKGEKVEFFH--DEC-RCPVYVRDVVKIILALTN 230
             +YGP +       S+       +   GE  + F   +   R  VYV DV  + L    
Sbjct: 215 FNVYGPREGHKGSMASVAFHLNTQLN-NGESPKLFEGSENFKRDFVYVGDVADVNLWFLE 273

Query: 231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQ-SPADI 289
             +S       + N+G     S   +A+              P       R    + AD+
Sbjct: 274 NGVSG------IFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADL 327

Query: 290 SMDITKLVQTLNIDP-VTYKDGVKLTLA 316
           +     L       P  T  +GV   +A
Sbjct: 328 T----NLRAAGYDKPFKTVAEGVTEYMA 351

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 81.4 bits (202), Expect = 9e-18
 Identities = 73/337 (21%), Positives = 125/337 (37%), Gaps = 62/337 (18%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFF 57
             K R+L+ GG G++G HL + L    G   +V             LD L   P      
Sbjct: 5   TLKHRILITGGAGFIGGHLARALVA-SG--EEVTV-----------LDDLRVPPMIPPEG 50

Query: 58  DVDLKSGSGFDAVALKFGQPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
                     +          +V + A+  SVPR  +  P   +  NV S   + L+  T
Sbjct: 51  TGKFLEKPVLELEERDLSDVRLVYHLASHKSVPRSFK-QPLDYLD-NVDSGR-HLLALCT 107

Query: 117 ENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEK--FIYEKCSNF---A 170
                 ++  ST +VY    +    E+  ++P + Y  SKV  E     +++ S      
Sbjct: 108 SVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVAPEVG 167

Query: 171 ILRSSIIYGP-QTISP---VPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKI 224
           I+R   +YGP +   P   VP+        ++L    ++    D  + R   Y+ DVV  
Sbjct: 168 IVRFFNVYGPGE--RPDALVPR-----LCANLL-TRNELPVEGDGEQRRDFTYITDVVDK 219

Query: 225 ILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQ 284
           ++AL NR L        ++N G    +S   +  ++               A+ V R   
Sbjct: 220 LVALANRPLPS------VVNFGSGQSLSVNDVIRILQAT----------SPAAEVARKQP 263

Query: 285 SPADI---SMDITKLVQTLNIDP--VTYKDGVKLTLA 316
            P +I     D     + +      +  ++G++LTL 
Sbjct: 264 RPNEITEFRADTALQTRQIGERSGGIGIEEGIRLTLE 300

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 79.6 bits (197), Expect = 4e-17
 Identities = 71/339 (20%), Positives = 135/339 (39%), Gaps = 41/339 (12%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVA-----ATHHSTPLPQLLLDALPHS-- 53
            S K  L+ G  G++G +LL+ L +       V      +T H   L ++          
Sbjct: 23  FSPKTWLITGVAGFIGSNLLEKLLK-LN--QVVIGLDNFSTGHQYNLDEVKTLVSTEQWS 79

Query: 54  -FVFFDVDLKSGSGFDAVALKFGQPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLVNW 111
            F F + D++               D V++ AAL SVPR   + P +  + N+   L N 
Sbjct: 80  RFCFIEGDIRD---LTTCEQVMKGVDHVLHQAALGSVPRSIVD-PITTNATNITGFL-NI 134

Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEI-APVNVYGKSKVAAEKF--IYEKCSN 168
           L +    +     + ++   Y    +  K E+ I  P++ Y  +K   E +  +Y +   
Sbjct: 135 LHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYG 194

Query: 169 F--AILRSSIIYGP--QTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVV 222
           F    LR   ++G            +P  W  ++L KG+ V    D    R   Y+ +V+
Sbjct: 195 FKTIGLRYFNVFGRRQDPNGAYAAVIPK-WTAAML-KGDDVYINGDGETSRDFCYIDNVI 252

Query: 223 K-IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDR 281
           +  IL+   +  ++D     + NV   DR +  +++  + +       + K    S   R
Sbjct: 253 QMNILSALAKDSAKDN----IYNVAVGDRTTLNELSGYIYDELNLIHHIDK---LSIKYR 305

Query: 282 GVQSPADISM---DITKLVQTLNIDP-VTYKDGVKLTLA 316
             +   D+     D+TK +  L   P +  ++G++L++ 
Sbjct: 306 EFR-SGDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMP 343

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 75.9 bits (187), Expect = 4e-16
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 31/192 (16%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
           M+ KR+LV G  G LG+ + + L+        +     S       LD    +      D
Sbjct: 1   MAMKRLLVTGAAGQLGRVMRERLAP-MA--EILRLADLSP------LDPAGPNEECVQCD 51

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
           L      +AV       D +V+   +SV +      +  +  N+     N   +   + +
Sbjct: 52  LAD---ANAVNAMVAGCDGIVHLGGISVEK----PFEQILQGNIIGLY-NLYEAARAHGQ 103

Query: 121 NLLIHLSTDQVY--EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-------- 170
             ++  S++              +    P  +YG SK   E         +         
Sbjct: 104 PRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENL----ARMYFDKFGQETA 159

Query: 171 ILRSSIIYGPQT 182
           ++R         
Sbjct: 160 LVRIGSCTPEPN 171

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 76.5 bits (189), Expect = 4e-16
 Identities = 63/323 (19%), Positives = 110/323 (34%), Gaps = 32/323 (9%)

Query: 6   VLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDALPHSFVFFDVDLKSG 64
           ++V GG G++G ++++ L++ +G   D+    +       + L  L  +      D    
Sbjct: 2   IIVTGGAGFIGSNIVKALND-KGI-TDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLI- 58

Query: 65  SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
                   +FG  + + +  A S     E D    M  N   S    L    E +    +
Sbjct: 59  --QIMAGEEFGDVEAIFHEGACS--STTEWDGKYMMDNNYQYSK-ELLHYCLEREIPF-L 112

Query: 125 HLSTDQVY-EGVKSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKC--SNFAILRSSIIYG 179
           + S+   Y      F +  +   P+NVYG SK   ++++        S     R   +YG
Sbjct: 113 YASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYG 172

Query: 180 P-QTISPVPKSLPIQWIDSVLSKGEKVEFFH--DEC-RCPVYVRDVVKIILALTNRWLSE 235
           P +       S+       +   GE  + F   +   R  VYV DV  + L      +S 
Sbjct: 173 PREGHKGSMASVAFHLNTQLN-NGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSG 231

Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQ-SPADISMDIT 294
                 + N+G     S   +A+              P       R    + AD++    
Sbjct: 232 ------IFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLT---- 281

Query: 295 KLVQTLNIDP-VTYKDGVKLTLA 316
            L       P  T  +GV   +A
Sbjct: 282 NLRAAGYDKPFKTVAEGVTEYMA 304

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 75.9 bits (187), Expect = 4e-16
 Identities = 52/283 (18%), Positives = 98/283 (34%), Gaps = 39/283 (13%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
           MS  ++L+ G  G LG  L + L+  +G  ++V     S          +P        D
Sbjct: 1   MSLSKILIAG-CGDLGLELARRLTA-QG--HEVTGLRRSA-------QPMPAGVQTLIAD 49

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
           +       ++     +P+++V C A S     E   +      V   L N LS+      
Sbjct: 50  VTRPDTLASIVH--LRPEILVYCVAAS-----EYSDEHYRLSYV-EGLRNTLSALEGAPL 101

Query: 121 NLLIHLSTDQVY-EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
             +  +S+  VY + V+ +  E+      +  GK  + AE  +        ILR S IYG
Sbjct: 102 QHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALLAAYS--STILRFSGIYG 159

Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
           P  +  +             ++  +     +     ++  D    I  L  +        
Sbjct: 160 PGRLRMIR-----------QAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVP-- 206

Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRG 282
           + L  V     +    +   +A+ +G    +  P  A+   +G
Sbjct: 207 ERLYIVTDNQPLPVHDLLRWLADRQG----IAYPAGATPPVQG 245

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 75.5 bits (186), Expect = 1e-15
 Identities = 43/278 (15%), Positives = 88/278 (31%), Gaps = 27/278 (9%)

Query: 5   RVLVVGGTGYLGQHLLQGLSE---IEGKPYD--VAATHHSTPLPQLLLDALPHSFVFFDV 59
            + ++G  G +G+ L Q L +   + GKP +            P         +      
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP----AGFSGAVDARAA 71

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWL-----SS 114
           DL +    + +     +PDV+ + AA+      E D D    IN+             ++
Sbjct: 72  DLSAPGEAEKLV--EARPDVIFHLAAIVSGE-AELDFDKGYRINL-DGTRYLFDAIRIAN 127

Query: 115 FTENKENLLIHLSTDQVY-EGVKSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCS--NF 169
             +  +  ++  S+  V+   +     +E    P+  YG  K   E  +  Y +    + 
Sbjct: 128 GKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDG 187

Query: 170 AILR-SSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP-VYVRDVVKIILA 227
             +R  +I   P   +          +   L   E V    +  R      R  V  ++ 
Sbjct: 188 IGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIH 247

Query: 228 LTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRG 265
                +  +K              +  +  E + ++ G
Sbjct: 248 GAM--IDVEKVGPRRNLSMPGLSATVGEQIEALRKVAG 283

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 75.4 bits (186), Expect = 1e-15
 Identities = 41/354 (11%), Positives = 101/354 (28%), Gaps = 70/354 (19%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
            +  +  V+G TG LG H  + +    G  +D+   H  +   Q L           + +
Sbjct: 11  GAHVKYAVLGATGLLGHHAARAIRA-AG--HDLVLIHRPSSQIQRLAYL--------EPE 59

Query: 61  LKSGSGFDAVALK--FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
            +     D   L+      D V+  A               ++  +           T  
Sbjct: 60  CRVAEMLDHAGLERALRGLDGVIFSAG--YYPSRPRRWQEEVASALGQ---------TNP 108

Query: 119 ------KENL--LIHLSTDQVYEGVKSFYKEEDEIAP-------VNVYGKSKVAAEKFIY 163
                 +  +  ++++ +               E           + Y   K A ++   
Sbjct: 109 FYAACLQARVPRILYVGSAYAM-PRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAR 167

Query: 164 EKCS---NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD 220
           E+        I    ++ G   I P    +    I ++ +   ++  +    R  +   +
Sbjct: 168 EQARNGLPVVIGIPGMVLGELDIGPTTGRV----ITAIGNG--EMTHYVAGQRNVIDAAE 221

Query: 221 VVK-IILA-----------LTNRWLSEDKQMQLLLNVGG---PDRVSR--VQMAEVVAEI 263
             + +++A           LT   L      + +  + G   P  +S    +    +  +
Sbjct: 222 AGRGLLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRL 281

Query: 264 RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLA 316
           R   +  +  +  ++++          +D  K  + L         D +   + 
Sbjct: 282 RYRVSGQLPLLDETAIE---VMAGGQFLDGRKAREELGFFSTTALDDTLLRAID 332

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 74.2 bits (183), Expect = 3e-15
 Identities = 60/337 (17%), Positives = 113/337 (33%), Gaps = 69/337 (20%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVA-----ATHHSTPLPQLLLDALPH--SFVF 56
           K+V + G  G +G H+ + L E  G    V      AT           + L    +  F
Sbjct: 22  KKVFITGICGQIGSHIAELLLE-RG--DKVVGIDNFATGR--------REHLKDHPNLTF 70

Query: 57  FDVDLKSGSGFDAVALKFGQPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLVNWLSSF 115
            +  +   +  + +     QPD VV+ AA    P     D  +    N      N + + 
Sbjct: 71  VEGSIADHALVNQLIGDL-QPDAVVHTAASYKDPD----DWYNDTLTNCVGGS-NVVQAA 124

Query: 116 TENKENLLIHLSTDQVY--EGVKSFYKEEDEIAPVN-VYGKSKVAAEKFIYEKCSNFAIL 172
            +N     ++  T   Y  + ++   + +    P N  Y  SK A E ++     +F   
Sbjct: 125 KKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTF 184

Query: 173 RSSIIYGP-QTISPVPKSLPIQWIDSVLSKGEKVE-------FFHDECRCPVYVRDVVK- 223
           R + + GP     P+P      +   +  +G+K         F        V+V+D+ + 
Sbjct: 185 RLANVVGPRNVSGPLPI-----FFQRLS-EGKKCFVTKARRDF--------VFVKDLARA 230

Query: 224 IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGV 283
            + A+       D       +      V+  ++ + V E     +            R +
Sbjct: 231 TVRAV-------DGVGHGAYHFSSGTDVAIKELYDAVVEAMALPSYPEP------EIREL 277

Query: 284 QSPADI---SMDITKLVQTLNIDP-VTYKDGVKLTLA 316
             P D     +D ++ +Q          K+ V   +A
Sbjct: 278 G-PDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAVA 313

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 73.7 bits (182), Expect = 4e-15
 Identities = 78/289 (26%), Positives = 118/289 (40%), Gaps = 54/289 (18%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVA-----ATHHSTPLPQLLLDALPHSFVFFDV 59
           RVLV GG G++G H+++ L    G   +VA     AT           + +P    FF V
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLA-RG--LEVAVLDNLATGK--------RENVPKGVPFFRV 50

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
           DL+   G +    +  +P  V + AA  SV    E DP     +N+   L N L +  + 
Sbjct: 51  DLRDKEGVERA-FREFRPTHVSHQAAQASVKVSVE-DPVLDFEVNLLGGL-NLLEACRQY 107

Query: 119 KENLLIHLSTDQ-VY----EGVKSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCS--NF 169
               L+  ST   +Y    EG ++  +E     P + Y  SK A E ++  Y +     +
Sbjct: 108 GVEKLVFASTGGAIYGEVPEGERA--EETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKW 165

Query: 170 AILRSSIIYGP-QTISPVPKS--LPIQWIDSVLSKGEKVEFFHD------EC-RCPVYVR 219
             LR   +YGP Q   P  ++  + I      + KG  V  +         C R  VYV 
Sbjct: 166 VSLRYGNVYGPRQ--DPHGEAGVVAI--FAERVLKGLPVTLYARKTPGDEGCVRDYVYVG 221

Query: 220 DVVK-IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYS 267
           DV +   LAL    L        + NVG  +  +  ++   VAE  G +
Sbjct: 222 DVAEAHALAL--FSLEG------IYNVGTGEGHTTREVLMAVAEAAGKA 262

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 70.8 bits (174), Expect = 6e-14
 Identities = 63/340 (18%), Positives = 117/340 (34%), Gaps = 58/340 (17%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAA--THHSTPLPQLLLDALPHSFVFFD 58
               ++ + G  G++  H+ + L   EG  + V A     +  + + +       F   D
Sbjct: 27  SENLKISITGAGGFIASHIARRLKH-EG--HYVIASDWKKNEHMTEDMFC---DEFHLVD 80

Query: 59  VDLKSGSGFDAVALKFGQPDVVVNCAA-LSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
           + +      +         D V N AA +      +++    M  N   S  N + +   
Sbjct: 81  LRVM-----ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISF-NMIEAARI 134

Query: 118 NKENLLIHLSTDQVY-----EGVKSFYKEEDEIAPVN---VYGKSKVAAEK--FIYEKCS 167
           N      + S+  +Y         +   +E +  P      +G  K+A E+    Y K  
Sbjct: 135 NGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF 194

Query: 168 NF--AILRSSIIYGPQTI-----SPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYV 218
                I R   IYGP           P +          +  ++ E + D  + R   ++
Sbjct: 195 GIECRIGRFHNIYGPFGTWKGGREKAPAAF----CRKAQTSTDRFEMWGDGLQTRSFTFI 250

Query: 219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLI---KPVS 275
            + V+ +L LT     E       +N+G  + VS  +MAE+V         +     P  
Sbjct: 251 DECVEGVLRLTKSDFRE------PVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEG 304

Query: 276 ASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLT 314
                RG  S      D   + + L   P +  K+G+++T
Sbjct: 305 ----VRGRNS------DNNLIKEKLGWAPNMRLKEGLRIT 334

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 67.9 bits (166), Expect = 5e-13
 Identities = 60/350 (17%), Positives = 119/350 (34%), Gaps = 50/350 (14%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH-----SFV 55
           M  K+VL++G  G++G HL + +         +  T        +  D L          
Sbjct: 22  MKAKKVLILGVNGFIGHHLSKRI---------LETTDWEVFGMDMQTDRLGDLVKHERMH 72

Query: 56  FFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSF 115
           FF+ D+      + V     + DV++   A++ P      P     ++  ++L   + S 
Sbjct: 73  FFEGDIT--INKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANL-PIVRSA 129

Query: 116 TENKENLLIHLSTDQVY-EGVKSFYKEEDE---IAPVN----VYGKSKVAAEKFIY---E 164
            +  ++L+   ST +VY       +  +       P+N    +Y  SK   ++ I+    
Sbjct: 130 VKYGKHLV-FPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGM 188

Query: 165 KCSNFAILRSSIIYGPQTISPVPKSLPI-----QWIDSVLSKGEKVEFFHD--ECRCPVY 217
           +  NF + R     GP   S             Q++  ++ +GE +       + R   Y
Sbjct: 189 EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIV-RGENISLVDGGSQKRAFTY 247

Query: 218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR-VSRVQMAEVVAEIRGYSTSLIKPVSA 276
           V D +  ++ +     S       + N+G P+   S  ++A  + E+             
Sbjct: 248 VDDGISALMKIIEN--SNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKR 305

Query: 277 SSVDRGVQS-----PADISM----DITKLVQTLNIDP-VTYKDGVKLTLA 316
             +                      I   +Q L   P  T+ D ++    
Sbjct: 306 VKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFE 355

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 66.4 bits (163), Expect = 1e-12
 Identities = 70/325 (21%), Positives = 117/325 (36%), Gaps = 48/325 (14%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVA-----ATHHSTPLPQLLLDALPHS--FVFF 57
           R+L+ GG G LG +L++     +G  +++      AT           + LP        
Sbjct: 22  RILITGGAGCLGSNLIEHWLP-QG--HEILVIDNFATGK--------REVLPPVAGLSVI 70

Query: 58  DVDLKSGSGFDAVALKFGQPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
           +  +      +     F +P  VV+ AA    P     D     + NV  S+ N   + +
Sbjct: 71  EGSVTDAGLLERAFDSF-KPTHVVHSAAAYKDPD----DWAEDAATNVQGSI-NVAKAAS 124

Query: 117 ENKENLLIHLSTDQVY-EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
           +     L++  T   Y          +   AP   YG SK A E F+         LR +
Sbjct: 125 KAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLA 184

Query: 176 IIYGP-QTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC-RCPVYVRDVVK-IILALTNRW 232
            + GP   I P+P           L  G+K   F  +  R  + + D +    L+L    
Sbjct: 185 NVTGPRLAIGPIPTFY------KRLKAGQKC--FCSDTVRDFLDMSDFLAIADLSLQEGR 236

Query: 233 LSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
            +       + NV   +  S  ++ +VV +  G   +L +PV    V  G      + +D
Sbjct: 237 PTG------VFNVSTGEGHSIKEVFDVVLDYVGA--TLAEPV--PVVAPGADDVPSVVLD 286

Query: 293 ITKLVQTLNIDP-VTYKDGVKLTLA 316
            +K          V +KD +   LA
Sbjct: 287 PSKTETEFGWKAKVDFKDTITGQLA 311

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 66.5 bits (162), Expect = 1e-12
 Identities = 42/282 (14%), Positives = 93/282 (32%), Gaps = 55/282 (19%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
            +++ G  G++G++L   L+      + +                       F+V  ++ 
Sbjct: 2   NIVITGAKGFVGKNLKADLTSTTD--HHI-----------------------FEVHRQTK 36

Query: 65  SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
              + +     + D +V+ A ++ P             NV S L + L   T N +   I
Sbjct: 37  --EEELESALLKADFIVHLAGVNRPE----HDKEFSLGNV-SYLDHVLDILTRNTKKPAI 89

Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCSN--FAILRSSIIYGP 180
            LS+                    N YG+SK+  E+ +  Y +       I R   ++G 
Sbjct: 90  LLSSSIQAT-------------QDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGK 136

Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC-RCPVYVRDVVKIILALTNRWLSEDKQM 239
               P   S+   +   +  + E+++           YV D+V  I              
Sbjct: 137 WC-KPNYNSVIATFCYKIA-RNEEIQVNDRNVELTLNYVDDIVAEIKRA---IEGTPTIE 191

Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDR 281
             +  V    +V+  ++ +++ + +        P   +  ++
Sbjct: 192 NGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEK 233

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 29/184 (15%), Positives = 56/184 (30%), Gaps = 25/184 (13%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDALPHSFVFFDVDLK 62
            R+LV G  G +G  +   L       ++V  +            +A          DL 
Sbjct: 3   NRLLVTGAAGGVGSAIRPHLGT-LA--HEVRLSDIVDLG----AAEAHEE---IVACDLA 52

Query: 63  SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
                 AV       D +++   +SV R      +  +  N+  +  N   +     +  
Sbjct: 53  D---AQAVHDLVKDCDGIIHLGGVSVER----PWNDILQANIIGAY-NLYEAARNLGKPR 104

Query: 123 LIHLSTDQVYEGVKSFYK--EEDEIAPVNVYGKSKVAAEKFI--YEKCSNF--AILRSSI 176
           ++  S++          +   E    P ++YG SK   E     Y    +     +R   
Sbjct: 105 IVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGS 164

Query: 177 IYGP 180
            +  
Sbjct: 165 CFPK 168

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 60.5 bits (146), Expect = 1e-10
 Identities = 53/324 (16%), Positives = 94/324 (29%), Gaps = 31/324 (9%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSE--IEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
              L+VG TG +G  L + L      G P+ V         P    D       +   D+
Sbjct: 2   SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARR-TRPAWHEDN---PINYVQCDI 57

Query: 62  KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
              S  D    K      V +   ++      +        N      N L +   N  N
Sbjct: 58  ---SDPDDSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSK-MFRNVLDAVIPNCPN 111

Query: 122 L--LIHLSTDQVYEGVKSFYKEE-------DEIAPVNVYGKSKVAAEKFIYEKCS----- 167
           L  +   +  + Y G    Y +         E  P   Y       E  + E+       
Sbjct: 112 LKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGL 171

Query: 168 NFAILRSSIIYGPQTISPVPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKIIL 226
            +++ R   I+G    S +     +    ++   +G+ + F   +     Y       ++
Sbjct: 172 TWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLI 231

Query: 227 ALTNRWLSEDKQ-MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQS 285
           A  + W + D        NV   D        +V+AE  G      +      +      
Sbjct: 232 AEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKL---QDL 288

Query: 286 PADISMDITKLVQTLNIDPVTYKD 309
                    ++V+   + P   KD
Sbjct: 289 MKGKEPVWEEIVRENGLTPTKLKD 312

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 56.7 bits (137), Expect = 3e-09
 Identities = 45/220 (20%), Positives = 65/220 (29%), Gaps = 45/220 (20%)

Query: 4   KRVLVVGGTGYLGQH-----------------LLQGLSEIEGKPYDVAATHHSTPLPQLL 46
            RV+V+GG GY G                   L++ L + +     +             
Sbjct: 12  SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 71

Query: 47  LDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALS-VPRVCENDPDSAM---SI 102
                 S   +  D+            F +PD VV+       P     D   A+     
Sbjct: 72  KALTGKSIELYVGDICDFEFLAESFKSF-EPDSVVHFGEQRSAPYSMI-DRSRAVYTQHN 129

Query: 103 NVPSSLVNWLSSFTENKENL-LIHLSTDQVYEGVKSFYKEEDEI---------------A 146
           NV  +L N L +  E  E   L+ L T   Y G  +   EE  I                
Sbjct: 130 NVIGTL-NVLFAIKEFGEECHLVKLGTMGEY-GTPNIDIEEGYITITHNGRTDTLPYPKQ 187

Query: 147 PVNVYGKSKVAAEKFIYEKCSN----FAILRSSIIYGPQT 182
             + Y  SKV     I   C         L   ++YG +T
Sbjct: 188 ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKT 227

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 67/346 (19%), Positives = 140/346 (40%), Gaps = 49/346 (14%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDALPHSFVFFDVDLKS 63
           RVL++G  G++G HL + L  +    Y+V      S  + + L    PH F F + D+  
Sbjct: 2   RVLILGVNGFIGNHLTERL--LREDHYEVYGLDIGSDAISRFL--NHPH-FHFVEGDISI 56

Query: 64  GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
            S  + +     + DVV+   A++ P     +P     ++   +L   +    + ++ ++
Sbjct: 57  HS--EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENL-RIIRYCVKYRKRII 113

Query: 124 IHLSTDQVYEGVKSFYKEEDE------IAPVN----VYGKSKVAAEKFIY----EKCSNF 169
              ST +VY G     K  DE      + PVN    +Y  SK   ++ I+    ++   F
Sbjct: 114 -FPSTSEVY-G-MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQF 170

Query: 170 AILRSSIIYGPQTISPVPKSLPI-----QWIDSVLSKGEKVEFFHD--ECRCPVYVRDVV 222
            + R     GP+  +     +       Q I +++ +G  ++      + RC   +RD +
Sbjct: 171 TLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLV-EGSPIKLIDGGKQKRCFTDIRDGI 229

Query: 223 KIILALTNRWLSEDKQMQLLLNVGGPDR-VSRVQMAEVVAEIRGYSTSLIKPVSASSVDR 281
           + +  +     + ++    ++N+G P+   S  ++ E++         L       +  R
Sbjct: 230 EALYRIIEN--AGNRCDGEIINIGNPENEASIEELGEMLLASFE-KHPLRHHFPPFAGFR 286

Query: 282 GVQSPA-------DISM---DITKLVQTLNIDP-VTYKDGVKLTLA 316
            V+S +       D+      I    + L+ +P +  ++ +  TL 
Sbjct: 287 VVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLD 332

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 53.0 bits (128), Expect = 4e-08
 Identities = 37/176 (21%), Positives = 73/176 (41%), Gaps = 45/176 (25%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGL------SEI------EGKPYDVAATHHSTPLPQLLLD 48
           +  + +L+ GGTG  G+  ++ +       +I      E K  ++A   +   +      
Sbjct: 19  LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRM------ 72

Query: 49  ALPHSFVFFDV-DLKSGSGFDAVALKFGQPDVVVNCAALS-VPRVCENDPDSAMSINVPS 106
                F   DV D       + +       D+ ++ AAL  VP + E +P   +  N+  
Sbjct: 73  ----RFFIGDVRD------LERLNYALEGVDICIHAAALKHVP-IAEYNPLECIKTNIMG 121

Query: 107 SLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI 162
           +  N +++  +N  + +I LSTD      K+         P+N+YG +K+ ++K  
Sbjct: 122 A-SNVINACLKNAISQVIALSTD------KAAN-------PINLYGATKLCSDKLF 163

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 51.3 bits (124), Expect = 1e-07
 Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 27/182 (14%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVA-----ATHHSTPLPQLLLDALPHSFVFFD 58
             +L+ GG GY+G H ++ L + EG    V       T H         DA+     F++
Sbjct: 2   NSILICGGAGYIGSHAVKKLVD-EG--LSVVVVDNLQTGHE--------DAITEGAKFYN 50

Query: 59  VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCE--NDPDSAMSINVPSSLVNWLSSFT 116
            DL+  +    V       + V++ AA S+  V      P    + NV  +L   L    
Sbjct: 51  GDLRDKAFLRDV-FTQENIEAVMHFAADSL--VGVSMEKPLQYYNNNVYGAL-CLLEVMD 106

Query: 117 ENKENLLIHLSTDQVY-EGVKSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCS--NFAI 171
           E K +  I  ST   Y E       EE    P N YG++K+A EK +  Y + S   + I
Sbjct: 107 EFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKI 166

Query: 172 LR 173
            R
Sbjct: 167 FR 168

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 34/233 (14%), Positives = 61/233 (26%), Gaps = 34/233 (14%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFV-FFDV 59
           M  K V ++G +G  G+ LL+ + E                  +     +    V F   
Sbjct: 16  MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK- 74

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
                   D  A  F   DV   C   +  +         +  +                
Sbjct: 75  -------LDDYASAFQGHDVGFCCLGTTRGKAGAEGFV-RVDRDYVLKSAELAK---AGG 123

Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIY 178
                 LS+    +                 Y + K   E  + E K   +++ R  ++ 
Sbjct: 124 CKHFNLLSSKGADKSSNFL------------YLQVKGEVEAKVEELKFDRYSVFRPGVLL 171

Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
             +  S   + L ++     L                V V  VV+ +L    R
Sbjct: 172 CDRQESRPGEWL-VRKFFGSLPDSWASGH-------SVPVVTVVRAMLNNVVR 216

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 30/237 (12%), Positives = 63/237 (26%), Gaps = 37/237 (15%)

Query: 1   MSK-KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDALPHSFVFFD 58
           M K K+++++G +G++G  LL       G  ++V A   H   +                
Sbjct: 1   MEKVKKIVLIGASGFVGSALLNEALN-RG--FEVTAVVRHPEKIK-----IENEHLKVKK 52

Query: 59  VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
            D+ S    D V       D V++            D    + + +       +    + 
Sbjct: 53  ADVSS---LDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTI-------IDGVKKA 102

Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCS----NFAILRS 174
             N  + +               +    P N+    K   E ++         ++     
Sbjct: 103 GVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSP 162

Query: 175 SIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTN 230
           +    P   +                 G+            + V D    +I  L +
Sbjct: 163 AADMRPGVRTG------------RYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEH 207

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 6e-07
 Identities = 49/316 (15%), Positives = 96/316 (30%), Gaps = 84/316 (26%)

Query: 29  KPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSV 88
             Y+V+       L Q LL+  P   V   +D   GSG      K      V     LS 
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPAKNVL--IDGVLGSG------K----TWVALDVCLSY 174

Query: 89  PRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV 148
              C+ D             + WL+    N    ++ +    +Y+   ++    D  + +
Sbjct: 175 KVQCKMDFK-----------IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223

Query: 149 NVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFF 208
               K ++ + +    +       +           P    L +  + +V +  +    F
Sbjct: 224 ----KLRIHSIQ---AELRRLLKSK-----------PYENCLLV--LLNVQNA-KAWNAF 262

Query: 209 HDECRCPVYVRD-----------VVKIILALTNRWLSEDKQMQLLLNVGG------PDRV 251
           +  C+  +  R               I L   +  L+ D+   LLL          P  V
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV 322

Query: 252 SRV---QMAEVVAEIRG----------YSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
                 +++ +   IR            +   +  +  SS++  V  PA+      K+  
Sbjct: 323 LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN--VLEPAEYR----KMFD 376

Query: 299 TLNIDPVTYKDGVKLT 314
            L++ P        + 
Sbjct: 377 RLSVFP----PSAHIP 388

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 45/270 (16%), Positives = 79/270 (29%), Gaps = 58/270 (21%)

Query: 2   SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT----HHSTPLPQLLLDALPHSFVFF 57
               VLV G  G++  H+++ L E     Y V  T         L +      P  F   
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLE---HGYKVRGTARSASKLANLQKRWDAKYPGRFETA 66

Query: 58  DV-DLKSGSGFDAVALKFGQPDVVVNCA-------------------ALSVPRVCENDPD 97
            V D+     +D   +K      V + A                    L+  R     P 
Sbjct: 67  VVEDMLKQGAYDE-VIK--GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS 123

Query: 98  --------SAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN 149
                   S +S  +P   V  +    E   N        +  +  K+  + + +   + 
Sbjct: 124 VKRFVLTSSTVSALIPKPNVEGIY-LDEKSWN-------LESIDKAKTLPESDPQ-KSLW 174

Query: 150 VYGKSKVAAEK----FIYEKCSNFAILRSSI----IYGPQTISPVPKSLPIQWIDSVLSK 201
           VY  SK  AE     F+ E   +F +  +++      G              W+ S+ + 
Sbjct: 175 VYAASKTEAELAAWKFMDENKPHFTL--NAVLPNYTIGTIFDPETQSGSTSGWMMSLFNG 232

Query: 202 GEKVEFFHDECRCPVYVRDVVKI-ILALTN 230
                      +  V   D+  + +  L  
Sbjct: 233 EVSPALALMPPQYYVSAVDIGLLHLGCLVL 262

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 49/324 (15%), Positives = 110/324 (33%), Gaps = 48/324 (14%)

Query: 3   KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
              +L  G  GY  + L + L+  +G  + +  T  +    + +  +     + +  +  
Sbjct: 5   TGTLLSFGH-GYTARVLSRALAP-QG--WRIIGTSRNPDQMEAIRASGAEPLL-WPGEEP 59

Query: 63  SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
           S    D V         ++    +S       DP       V ++L + +++        
Sbjct: 60  S---LDGV-------THLL----ISTAPDSGGDP-------VLAALGDQIAARAAQFRW- 97

Query: 123 LIHLSTDQVY-EGVKSFYKEEDEIAPVNVYGKSKVAAEK-FIYEKCSNFAILRSSIIYGP 180
           + +LST  VY +   ++  E   + P    G+ +V AE+ +         + R + IYGP
Sbjct: 98  VGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGP 157

Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
                            +   G +      +    ++V D+ +++ A   R         
Sbjct: 158 GR----------GPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPGA---- 203

Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADIS--MDITKLVQ 298
            + NV   + V    +    AE++G           + +    +S    +  +   ++ +
Sbjct: 204 -VYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKE 262

Query: 299 TLNIDPV--TYKDGVKLTLAAEAT 320
            L +      Y+ G++   A   T
Sbjct: 263 ELGVRLKYPNYRVGLEALQADAET 286

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 53/339 (15%), Positives = 113/339 (33%), Gaps = 47/339 (13%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP--LPQLLLDALPHSFVFFDV-D 60
           KRV V G TG+ G  L   L  +       + T  + P       +     S    D+ D
Sbjct: 10  KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQS-EIGDIRD 68

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
                     +++  QP++V + AA  + R+  ++P    S NV  ++    +       
Sbjct: 69  QNKLLE----SIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGV 124

Query: 121 NLLIHLSTDQVYE--GVKSFYKEEDEIAPVNVYGKSKVAAE-------------KFIYEK 165
             ++++++D+ Y+       Y+E + +   + Y  SK  AE                 + 
Sbjct: 125 KAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQH 184

Query: 166 CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP------VYVR 219
            +  A +R+  + G    +     +    + +   + + V       R P       +V 
Sbjct: 185 GTAVATVRAGNVIGGGDWA--LDRIVPDILRAF-EQSQPVII-----RNPHAIRPWQHVL 236

Query: 220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSV 279
           + +   L L  +  ++  +     N  GP+      +  +V ++  Y           + 
Sbjct: 237 EPLSGYLLLAQKLYTDGAEYAEGWNF-GPNDADATPVKNIVEQMVKYWGEGASWQLDGN- 294

Query: 280 DRGVQSPADIS---MDITKLVQTLNIDPV-TYKDGVKLT 314
                 P +     +D +K    L   P       ++  
Sbjct: 295 ----AHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYI 329

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 46.4 bits (110), Expect = 5e-06
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 1  MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
           S+ R+L++G TGY+G+H+ +    ++           ST         L  SF     +
Sbjct: 2  GSRSRILLIGATGYIGRHVAKAS--LDLGHPTFLLVRESTASSNSEKAQLLESFKASGAN 59

Query: 61 LKSGSGFDAVALK--FGQPDVVVNCAA 85
          +  GS  D  +L       DVV++   
Sbjct: 60 IVHGSIDDHASLVEAVKNVDVVISTVG 86

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 45.8 bits (108), Expect = 9e-06
 Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 4/86 (4%)

Query: 2  SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLDALPHSFV-FFDV 59
           K RVL+ G TG++GQ +     +   +P  + A      P    +  AL          
Sbjct: 9  PKGRVLIAGATGFIGQFVATASLD-AHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYG 67

Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAA 85
           +      +   LK  + D+VV+   
Sbjct: 68 LINEQEAMEK-ILKEHEIDIVVSTVG 92

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 35/235 (14%), Positives = 65/235 (27%), Gaps = 46/235 (19%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
            + KRVL+ G TG  G+HLL  +   E     V A           LD            
Sbjct: 3   STPKRVLLAGATGLTGEHLLDRILS-EPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQ 61

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSF-TENK 119
           L                D    C  L      +          V   L   +     E  
Sbjct: 62  LDGS------------IDTAFCC--LGTTI--KEAGSEEAFRAVDFDLPLAVGKRALEMG 105

Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF---AILRSSI 176
               + +S          F            Y + K   E+ +  +   +    I R S+
Sbjct: 106 ARHYLVVSALGADAKSSIF------------YNRVKGELEQAL--QEQGWPQLTIARPSL 151

Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
           ++GP+      +    + + + +++    ++        +   D+ + +  L   
Sbjct: 152 LFGPRE-----EFRLAEILAAPIARILPGKYH------GIEACDLARALWRLALE 195

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 44.9 bits (106), Expect = 2e-05
 Identities = 52/325 (16%), Positives = 93/325 (28%), Gaps = 62/325 (19%)

Query: 2   SKKRVLVVGGTGYLGQHLLQGL---SEIEGKPY---------------DVAATHHSTPLP 43
             + VL+ G TG+LG++L+  L    +++G+                 +         L 
Sbjct: 72  ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELL 131

Query: 44  QLLLDALPHSFVFFDVDLK------SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPD 97
           +   +           D            +  +A      D++V+ AA     V      
Sbjct: 132 RHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLA---ETVDLIVDSAA----MVNAFPYH 184

Query: 98  SAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV--------- 148
                NV +     +      K     ++ST  V   ++     ED    V         
Sbjct: 185 ELFGPNV-AGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDG 243

Query: 149 ---NVYGKSKVAAEKFIYE--KCSNF--AILRSSIIYGPQTISPV--PKSLPIQWIDSVL 199
                YG SK A E  + E         A+ R  +I    + +          + + S++
Sbjct: 244 GWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLM 303

Query: 200 SKGEKVEFFHDECRCPVY---------VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR 250
           + G     F++                V  V + I  L  R            +V  P  
Sbjct: 304 ATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHD 363

Query: 251 VSRVQMAEVVAEIR--GYSTSLIKP 273
              + + E V  +   GY    I  
Sbjct: 364 DG-IGLDEYVDWLIEAGYPIRRIDD 387

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 44/280 (15%), Positives = 85/280 (30%), Gaps = 54/280 (19%)

Query: 2   SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
           +   VLV G +G  GQ + + L E     +             L+  A     +  + D+
Sbjct: 3   NLPTVLVTGASGRTGQIVYKKLKE-GSDKFVAKG---------LVRSAQGKEKIGGEADV 52

Query: 62  KSGSGFDAVALK--FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSL------VNWLS 113
             G   DA ++   F   D +V   +         DP                  V+W+ 
Sbjct: 53  FIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIG 112

Query: 114 SFTENKENLLIHLSTDQVYEGVK-----SFYKEEDEIAPVNV-----YGKSKVAAEKFIY 163
              +N     I  +      GVK           +   P+N          K  AE+++ 
Sbjct: 113 --QKN----QIDAAKVA---GVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLA 163

Query: 164 EKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK 223
           +  + + I+R+  +   +      + L +   D +L    K           V   DV +
Sbjct: 164 DSGTPYTIIRAGGLLDKEGGV---RELLVGKDDELLQTDTK----------TVPRADVAE 210

Query: 224 IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEI 263
           + +      L  ++      ++G     +     +  A  
Sbjct: 211 VCIQA----LLFEEAKNKAFDLGSKPEGTSTPTKDFKALF 246

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 62/267 (23%), Positives = 89/267 (33%), Gaps = 66/267 (24%)

Query: 3   KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ---LLLDALPHS---FVF 56
           K RV V GGTG+LG  +++ L E  G  Y V  T  + P  +     L  LP +     F
Sbjct: 1   KGRVCVTGGTGFLGSWIIKSLLE-NG--YSVNTTIRADPERKRDVSFLTNLPGASEKLHF 57

Query: 57  FDVDLKSGSGFDA----------VA--LKFGQPD---VVVNCA---ALSVPRVCENDPD- 97
           F+ DL +   F A           A  + F   +   +V       AL + + C N    
Sbjct: 58  FNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTV 117

Query: 98  ---------SAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV 148
                    SA+S N     V       E+        S   +   VK            
Sbjct: 118 KRFIYTSSGSAVSFNGKDKDV-----LDES------DWSDVDLLRSVKP---------FG 157

Query: 149 NVYGKSKVAAEK----FIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEK 204
             Y  SK  AEK    F  +   +   L    I G      +P S  I+    ++   ++
Sbjct: 158 WNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDS--IEKALVLVLGKKE 215

Query: 205 VEFFHDECRCPVYVRDVVKI-ILALTN 230
                      V+V DV +  I  L N
Sbjct: 216 Q--IGVTRFHMVHVDDVARAHIYLLEN 240

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score = 44.4 bits (106), Expect = 3e-05
 Identities = 45/199 (22%), Positives = 72/199 (36%), Gaps = 46/199 (23%)

Query: 1   MS-KKRVLVVGGTGYLGQH----LLQGLSEIEGKPYDVAAT---HHSTPLPQLLLDALP- 51
           MS K  +LV GG GY+G H    LL       G  YDV       +S        +A+  
Sbjct: 2   MSTKGTILVTGGAGYIGSHTAVELLA-----HG--YDVVIADNLVNSKR------EAIAR 48

Query: 52  ------HSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAAL-----SVPRVCENDPDSAM 100
                  +  F + D+        +          ++ AAL     SV       P    
Sbjct: 49  IEKITGKTPAFHETDVSDERALARI-FDAHPITAAIHFAALKAVGESV-----AKPIEYY 102

Query: 101 SINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAE 159
             N+  SL++ L    E     ++  S+  VY   +     E   ++  N YG++K+ AE
Sbjct: 103 RNNL-DSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAE 161

Query: 160 KFIYEKCS-----NFAILR 173
           + + +  +       A LR
Sbjct: 162 QILRDVEAADPSWRVATLR 180

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 3/86 (3%)

Query: 2  SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
          ++ ++L++G TG +G+H++    +  G P         T       + L  ++    V L
Sbjct: 1  TENKILILGPTGAIGRHIVWASIK-AGNPTYALVRKTITAANPETKEELIDNYQSLGVIL 59

Query: 62 KSGSGFDAVALK--FGQPDVVVNCAA 85
            G   D   L     Q D+V+  A 
Sbjct: 60 LEGDINDHETLVKAIKQVDIVICAAG 85

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 43.0 bits (102), Expect = 7e-05
 Identities = 41/204 (20%), Positives = 65/204 (31%), Gaps = 35/204 (17%)

Query: 2   SKKRVLVVGGTGYLGQH----LLQ--------------GLSEIEGKPYDVAATHHSTPLP 43
           S  RVLV GG GY+G H    LL+                 + +                
Sbjct: 1   SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSD 60

Query: 44  QLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCE--NDPDSAMS 101
                           D+++    + V  + G  D VV+  A     V E   DP     
Sbjct: 61  GPKPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLA--VGESVRDPLKYYD 118

Query: 102 INVPSSLVNWLSSFTENKENLLIHLSTDQVY--------EGVKSFYKEEDEIAPVNVYGK 153
            NV   L   L +   +K + +I  S+  ++                   + +P + YG+
Sbjct: 119 NNVVGIL-RLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGE 177

Query: 154 SKVAAEKFIYEKCS----NFAILR 173
           SK+ AE+ I +           LR
Sbjct: 178 SKLIAERMIRDCAEAYGIKGICLR 201

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 43.0 bits (101), Expect = 7e-05
 Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 7/86 (8%)

Query: 1  MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAA-THHSTPLPQLLLDALPHSFVFFDV 59
            K ++L+ GGTGY+G H+++G  +     +     T  ++    LL +      +    
Sbjct: 9  GMKSKILIFGGTGYIGNHMVKGSLK---LGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKG 65

Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAA 85
          +L          +K    DVV++  A
Sbjct: 66 ELDEHEKLVE-LMK-KV-DVVISALA 88

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 66/335 (19%), Positives = 128/335 (38%), Gaps = 52/335 (15%)

Query: 2   SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDALPHS-FVFFDV 59
            +KR+L+ GG G++G HL   L       ++V    +  T   + +   + H  F   + 
Sbjct: 26  DRKRILITGGAGFVGSHLTDKLMM---DGHEVTVVDNFFTGRKRNVEHWIGHENFELINH 82

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
           D+      + + ++    D + + A+ + P     +P   +  N   +L N L       
Sbjct: 83  DVV-----EPLYIEV---DQIYHLASPASPPNYMYNPIKTLKTNTIGTL-NMLGLAKRVG 133

Query: 120 ENLLIHLSTDQVY-EGVKSFYKEEDE-----IAPVNVYGKSKVAAEKFIY----EKCSNF 169
             LL+  ST +VY +       E+       I P   Y + K  AE   Y    ++    
Sbjct: 134 ARLLL-ASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEV 192

Query: 170 AILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILA 227
            + R    +GP+      + +   +I   L +GE +  +    + R   YV D+V  ++A
Sbjct: 193 RVARIFNTFGPRMHMNDGRVVS-NFILQAL-QGEPLTVYGSGSQTRAFQYVSDLVNGLVA 250

Query: 228 LTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLI-KPVSASSVDRGVQSP 286
           L N  +S        +N+G P+  + ++ A+++  + G  + +                 
Sbjct: 251 LMNSNVSS------PVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLS-----------EA 293

Query: 287 ADISM----DITKLVQTLNIDP-VTYKDGVKLTLA 316
            D       DI K    L  +P V  ++G+   + 
Sbjct: 294 QDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 328

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 52/196 (26%), Positives = 76/196 (38%), Gaps = 38/196 (19%)

Query: 2   SKKRVLVVGGTGYLGQH----LLQGLSEIEGKPYDVAAT---HHSTPLPQLLLDALP-HS 53
           + K VLV GG GY+G H    L++      G  YD        +ST      L+ L  H 
Sbjct: 10  TSKIVLVTGGAGYIGSHTVVELIE-----NG--YDCVVADNLSNSTYDSVARLEVLTKHH 62

Query: 54  FVFFDVDLKSGSGFDAVALKFGQPDVVVNCAAL-----SVPRVCENDPDSAMSINVPSSL 108
             F++VDL    G + V  ++ + D V++ A L     S        P      N+    
Sbjct: 63  IPFYEVDLCDRKGLEKVFKEY-KIDSVIHFAGLKAVGEST-----QIPLRYYHNNI-LGT 115

Query: 109 VNWLSSFTENKENLLIHLSTDQVYEGVKSF-----YKEEDEIAPVNVYGKSKVAAEKFIY 163
           V  L    +   +  +  S+  VY     F       EE  + P N YG +K A E  + 
Sbjct: 116 VVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILN 175

Query: 164 EKCS------NFAILR 173
           +  +       FAILR
Sbjct: 176 DLYNSDKKSWKFAILR 191

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 50/267 (18%), Positives = 83/267 (31%), Gaps = 64/267 (23%)

Query: 2   SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT----HHSTPLPQLL-LDALPHSFVF 56
             + V V G +G++G  L+  L E  G  Y V AT     +   +  LL L         
Sbjct: 4   QSETVCVTGASGFIGSWLVMRLLE-RG--YTVRATVRDPTNVKKVKHLLDLPKAETHLTL 60

Query: 57  FDVDLKSGSGFDA----------VA--LKFGQPDVVVNC------AALSVPRVCENDPD- 97
           +  DL     FD           VA  + F   D             L + + C      
Sbjct: 61  WKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTV 120

Query: 98  ---------SAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV 148
                      ++I      V     + E+        S D  +   K            
Sbjct: 121 RRLVFTSSAGTVNIQEHQLPV-----YDES------CWS-DMEFCRAKK--------MTA 160

Query: 149 NVYGKSKVAAEK----FIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEK 204
            +Y  SK  AE+    +  E   +F  +  +++ GP  +S +P S  +    S +  G +
Sbjct: 161 WMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPS--LITALSPI-TGNE 217

Query: 205 VEFFHDECRCPVYVRDVVKI-ILALTN 230
             +        V++ D+    I    N
Sbjct: 218 AHYSIIRQGQFVHLDDLCNAHIYLFEN 244

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 40.7 bits (95), Expect = 3e-04
 Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 8/88 (9%)

Query: 2  SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDV---AATHHSTPLPQLLLDALPHSFV-FF 57
            +++++ GGTGY+G+ +++        P  +     T  STP    L +      V   
Sbjct: 3  HMEKIIIYGGTGYIGKFMVRASLS-FSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTII 61

Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAA 85
          + +++      +  LK    D+V++   
Sbjct: 62 EGEMEEHEKMVS-VLK-QV-DIVISALP 86

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 40.7 bits (95), Expect = 3e-04
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 6/92 (6%)

Query: 1  MS-KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
          M  K RVL+VGGTGY+G+ ++          +          +  +    +   F     
Sbjct: 1  MDKKSRVLIVGGTGYIGKRIVNASIS---LGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA 57

Query: 60 DLKSGSGFDAVALK--FGQPDVVVNCAALSVP 89
           L   S  D   L     Q DVV++  A  V 
Sbjct: 58 KLIEASLDDHQRLVDALKQVDVVISALAGGVL 89

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336

 Score = 40.5 bits (96), Expect = 4e-04
 Identities = 45/197 (22%), Positives = 72/197 (36%), Gaps = 78/197 (39%)

Query: 1   MSKKRVLVVGGTGYLGQHL------------------------LQGLSEIEGKPYDVAAT 36
           M   ++LV GG G++G +                            L ++E  P      
Sbjct: 1   MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPR----- 55

Query: 37  HHSTPLPQLLLDALPHSFVFFDV-DLKSGSGFDAVALKFGQPDVVVNCAALS-VPRVCEN 94
                          ++FV  DV D      ++ V     + D VV+ AA S V R    
Sbjct: 56  ---------------YTFVKGDVAD------YELVKELVRKVDGVVHLAAESHVDR---- 90

Query: 95  DPDSAMSINVPSSLV--NWLSSFT-------ENKENLLIHLSTDQVY----EGVKSFYKE 141
                 SI+ P   +  N + ++T       EN E   +H+STD+VY    +G    + E
Sbjct: 91  ------SISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKG---SFTE 141

Query: 142 EDEIAPVNVYGKSKVAA 158
            D + P + Y  +K A+
Sbjct: 142 NDRLMPSSPYSATKAAS 158

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 40.2 bits (95), Expect = 5e-04
 Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 28/168 (16%)

Query: 1   MSKKRVLVVGGTG----YLGQHLLQGLSEIEGKPYDVAAT--HHSTPLPQLLLDALPHSF 54
               R L+ G  G    YL  HL +       +  +V  T  ++   LP + +     S 
Sbjct: 10  HGSMRALITGVAGFVGKYLANHLTE-------QNVEVFGTSRNNEAKLPNVEM----ISL 58

Query: 55  VFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSS 114
                D+        V +   +PD + + AA S  +    +     S NV  +L + L +
Sbjct: 59  -----DIMDSQRVKKV-ISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTL-HVLDA 111

Query: 115 FTENKENLLIHL-STDQVYEGV---KSFYKEEDEIAPVNVYGKSKVAA 158
             ++  +  I    + + Y  +   +S   EE+++ P++ YG SK + 
Sbjct: 112 VRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASV 159

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 12/115 (10%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
           MS   V+V G    +G  L+Q L + +     + AT         L            + 
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVK-DKNIRHIIATARDVEKATELKSIKDSRVHVLPLT 59

Query: 61  LKSGSGFDAVALKFGQP------DVVVNCAALSVPRVCENDPDSA-----MSINV 104
           +      D    K G+        +++N A + +      +P+ A     + +N 
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNT 114

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	320
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	100.0
1xq6_A	253	Unknown protein; structural genomics, protein stru	100.0
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	100.0
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	100.0
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.98
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.97
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.97
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.97
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.97
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.97
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.96
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.96
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.96
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.96
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.95
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.95
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.95
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.95
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.95
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.94
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.94
1spx_A	278	Short-chain reductase family member (5L265); paral	99.94
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.93
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.93
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.93
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.93
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.93
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.93
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.93
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.93
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.93
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.93
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.93
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.93
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.93
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.93
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.93
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.92
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.92
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.92
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.92
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.92
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.92
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.92
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.92
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.92
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.92
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.92
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.92
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.92
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.92
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.92
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.92
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.92
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.92
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.92
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.92
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.92
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.92
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.92
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.92
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.92
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.92
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.92
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.92
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.92
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.91
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.91
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.91
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.91
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.91
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.91
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.91
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.91
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.91
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.91
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.91
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.91
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.91
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.91
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.91
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.91
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.91
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.91
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.91
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.91
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.91
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.91
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.91
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.91
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.91
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.91
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.91
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.91
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.91
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.91
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.91
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.91
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.91
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.9
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.9
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.9
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.9
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.9
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.9
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.9
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.9
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.9
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.9
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.9
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.9
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.9
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.9
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.9
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.9
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.9
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.9
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.9
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.9
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.9
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.9
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.9
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.9
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.9
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.9
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.9
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.9
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.9
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.9
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.89
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.89
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.89
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.89
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.89
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.89
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.89
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.89
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.89
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.89
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.89
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.89
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.89
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.89
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.89
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.89
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.89
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.89
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.89
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.89
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.89
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.89
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.89
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.89
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.89
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.89
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.89
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.89
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.89
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.89
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.89
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.88
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.88
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.88
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.88
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.88
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.88
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.88
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.88
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.88
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.88
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.88
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.88
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.88
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.88
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.88
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.88
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.88
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.88
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.88
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.88
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.88
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.88
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.88
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.87
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.87
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.87
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.87
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.87
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.87
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.87
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.87
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.86
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.86
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.86
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.86
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.85
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.85
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.85
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.85
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.85
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.84
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.84
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.84
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.83
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.83
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.83
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.82
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.82
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.82
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.82
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.82
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.81
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.81
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.81
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.81
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.8
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.8
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.8
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.78
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.78
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.77
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.75
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.73
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.72
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.71
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.69
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.65
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.62
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.56
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.53
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.51
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.49
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.48
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.47
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.46
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.45
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.36
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.32
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.24
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.14
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.14
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.99
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.99
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.97
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.94
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.85
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.83
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.83
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.76
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.74
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.7
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.67
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.64
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.52
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.51
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	98.48
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.4
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.38
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.38
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.35
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.29
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.26
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.19
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.16
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	98.13
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.12
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	98.11
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	98.11
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.09
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.08
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.05
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.04
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.03
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.01
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.97
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.95
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.93
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.93
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.93
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.86
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.86
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.85
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.85
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.8
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.78
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.77
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.76
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.74
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.72
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.71
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.68
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.68
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.67
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.67
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.66
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.66
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.66
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.66
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.65
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.65
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.64
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.62
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.62
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.62
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.57
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.57
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.57
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	97.57
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.54
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.53
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.53
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.51
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.48
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.48
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.46
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.45
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.4
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.39
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.39
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.36
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.35
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.35
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.34
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.33
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	97.31
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.3
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.29
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.27
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.26
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.26
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.22
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.21
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.21
3e5r_O	337	PP38, glyceraldehyde-3-phosphate dehydrogenase, cy	97.18
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.18
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.15
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.14
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.12
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.11
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	97.1
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.07
3ouz_A	446	Biotin carboxylase; structural genomics, center fo	97.07
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.07
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.06
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.05
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	97.05
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.05
3cps_A	354	Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, g	97.04
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.03
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.03
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.03
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.03
1u8f_O	335	GAPDH, glyceraldehyde-3-phosphate dehydrogenase, l	97.03
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.03
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	97.02
1lnq_A	336	MTHK channels, potassium channel related protein;	97.01
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.01
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.01
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.01
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.98
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.98
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.96
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.94
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.93
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.93
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.91
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.91
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.91
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.9
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.9
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.9
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.86
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.86
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.85
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	96.85
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.83
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.82
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.81
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	96.81
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	96.8
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.79
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.77
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.76
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.75
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.74
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.74
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.73
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.73
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.73
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.73
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.72
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.72
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.71
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.71
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.7
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.7
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.69
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.69
2w70_A	449	Biotin carboxylase; ligase, ATP-binding, fatty aci	96.68
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.68
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.67
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.66
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.65
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.65
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.65
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.64
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.63
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.62
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.62
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.6
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.59
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.58
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	96.58
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.58
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.58
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	96.57
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.56
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.54
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.53
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	96.51
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.5
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	96.49
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.48

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=8.5e-51  Score=357.24  Aligned_cols=307  Identities=19%  Similarity=0.224  Sum_probs=247.9

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC--------CcceEEEeeCCCcccHHHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--------HSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~--------~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      |++|+|||||||||||++|+++|+++|   ++|++++|+..........+.        .+++++.+|++|++++.++++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   99 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLN---QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK   99 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc
Confidence            357899999999999999999999999   899999998665433222111        478899999999998888877


Q ss_pred             HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchH
Q 020880           73 KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVY  151 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y  151 (320)
                         ++|+|||||+......+..++...+++|+.++. +++++|++.++++|||+||.++|+.... +++|+++..|.+.|
T Consensus       100 ---~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~-~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  175 (351)
T 3ruf_A          100 ---GVDHVLHQAALGSVPRSIVDPITTNATNITGFL-NILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPY  175 (351)
T ss_dssp             ---TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHH-HHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHH
T ss_pred             ---CCCEEEECCccCCcchhhhCHHHHHHHHHHHHH-HHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChh
Confidence               899999999987666666788889999999996 9999999999999999999999987655 89999999999999


Q ss_pred             HHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCC-CChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHH
Q 020880          152 GKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPK-SLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKI  224 (320)
Q Consensus       152 ~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~  224 (320)
                      +.+|..+|++++.+    +.+++++||+.||||+....... .++..++..+. .+.++.++++  ..++|||++|+|++
T Consensus       176 ~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~g~~~~~~i~v~Dva~a  254 (351)
T 3ruf_A          176 AVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAML-KGDDVYINGDGETSRDFCYIDNVIQM  254 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHH-HTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHH-cCCCcEEeCCCCeEEeeEEHHHHHHH
Confidence            99999999988764    67899999999999987533222 33444554444 5677777654  68999999999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP  304 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~  304 (320)
                      ++.++.+..   ...+++||+++++.+|+.|+++.+.+.+|.+.... ..+...............+|++|++++|||+|
T Consensus       255 ~~~~~~~~~---~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p  330 (351)
T 3ruf_A          255 NILSALAKD---SAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHID-KLSIKYREFRSGDVRHSQADVTKAIDLLKYRP  330 (351)
T ss_dssp             HHHHHTCCG---GGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC------EEECCCTTCCSBCCBCCHHHHHHHCCCC
T ss_pred             HHHHHhhcc---ccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccc-cccccccCCCCCccceeeeCHHHHHHHhCCCC
Confidence            999998721   12355999999999999999999999999854332 11111122233345678899999999999999


Q ss_pred             -cCHHHHHHHHHhhhc
Q 020880          305 -VTYKDGVKLTLAAEA  319 (320)
Q Consensus       305 -~~~~~~l~~~i~~~~  319 (320)
                       ++++++|+++++|++
T Consensus       331 ~~~~~~~l~~~~~~~~  346 (351)
T 3ruf_A          331 NIKIREGLRLSMPWYV  346 (351)
T ss_dssp             CCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHH
Confidence             799999999999986

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=5.1e-49  Score=345.22  Aligned_cols=301  Identities=21%  Similarity=0.306  Sum_probs=239.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhhhC--CCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLDAL--PHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      ++|+|||||||||||++|+++|+++|+. ++|+++.|.... ........  ..+++++.+|++|++++.++++.. ++|
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d  100 (346)
T 4egb_A           23 NAMNILVTGGAGFIGSNFVHYMLQSYET-YKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER-DVQ  100 (346)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHCTT-EEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-TCC
T ss_pred             CCCeEEEECCccHHHHHHHHHHHhhCCC-cEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc-CCC
Confidence            4689999999999999999999999966 788888876422 11111211  247889999999999999999854 699


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhccc--CCCCcccCCCCCcchHHHHHH
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKV  156 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~--~~~~~E~~~~~p~~~Y~~sK~  156 (320)
                      +|||+|+......+..+++..+++|+.++. +++++|++.++++|||+||.++|+..  ..+++|+++..|.+.|+.+|.
T Consensus       101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~-~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~  179 (346)
T 4egb_A          101 VIVNFAAESHVDRSIENPIPFYDTNVIGTV-TLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKA  179 (346)
T ss_dssp             EEEECCCCC---------CHHHHHHTHHHH-HHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHH
T ss_pred             EEEECCcccchhhhhhCHHHHHHHHHHHHH-HHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHH
Confidence            999999987766566788899999999996 99999999999999999999999975  348999999999999999999


Q ss_pred             HHHHHHHH----HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHh
Q 020880          157 AAEKFIYE----KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTN  230 (320)
Q Consensus       157 ~~e~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~  230 (320)
                      .+|++++.    .+.+++++||+.||||+..   ...++..++.. +..+.++.++++  ..++|||++|+|++++.+++
T Consensus       180 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~  255 (346)
T 4egb_A          180 SADMIALAYYKTYQLPVIVTRCSNNYGPYQY---PEKLIPLMVTN-ALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH  255 (346)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEEESTTCC---TTSHHHHHHHH-HHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeecceeCcCCC---ccchHHHHHHH-HHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHh
Confidence            99998887    4778999999999999864   22334444444 446777777764  68999999999999999998


Q ss_pred             hhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHH
Q 020880          231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKD  309 (320)
Q Consensus       231 ~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~  309 (320)
                      ++.     .+++||+++++.+|+.|+++.+.+.+|.+.+.+...+     ........+.+|++|++++|||+| +++++
T Consensus       256 ~~~-----~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e  325 (346)
T 4egb_A          256 KGR-----VGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVT-----DRLGHDRRYAINAEKMKNEFDWEPKYTFEQ  325 (346)
T ss_dssp             HCC-----TTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEEC-----C--CCCSCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred             cCC-----CCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccC-----CCCCCcceeeccHHHHHHHcCCCCCCCHHH
Confidence            854     2459999999999999999999999998765332221     122234557899999999999999 79999


Q ss_pred             HHHHHHhhhc
Q 020880          310 GVKLTLAAEA  319 (320)
Q Consensus       310 ~l~~~i~~~~  319 (320)
                      +|+++++|++
T Consensus       326 ~l~~~~~~~~  335 (346)
T 4egb_A          326 GLQETVQWYE  335 (346)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999986

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.9e-49  Score=350.14  Aligned_cols=307  Identities=20%  Similarity=0.311  Sum_probs=244.6

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCC-CcccHHHHHHHhCCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK-SGSGFDAVALKFGQPD   78 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~~~~d   78 (320)
                      |+||+|||||||||||++|+++|+++ |   ++|++++|+.+....+..  ..+++++.+|++ |.+.+.++++   ++|
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~~d~~~~~~~~~---~~d   93 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTD---WEVFGMDMQTDRLGDLVK--HERMHFFEGDITINKEWVEYHVK---KCD   93 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSS---CEEEEEESCCTTTGGGGG--STTEEEEECCTTTCHHHHHHHHH---HCS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCC---CEEEEEeCChhhhhhhcc--CCCeEEEeCccCCCHHHHHHHhc---cCC
Confidence            56789999999999999999999998 8   899999999876655443  257889999999 9998988888   799


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCC-------CCcch
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEI-------APVNV  150 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~-------~p~~~  150 (320)
                      +|||||+...+..+..++...+++|+.++. +++++|++.+ ++|||+||.++||.... +++|+++.       .|.+.
T Consensus        94 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~-~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~  171 (372)
T 3slg_A           94 VILPLVAIATPATYVKQPLRVFELDFEANL-PIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWI  171 (372)
T ss_dssp             EEEECBCCCCHHHHHHCHHHHHHHHTTTTH-HHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHH
T ss_pred             EEEEcCccccHHHHhhCHHHHHHHHHHHHH-HHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCc
Confidence            999999988766566788899999999996 9999999999 89999999999997554 78888754       67789


Q ss_pred             HHHHHHHHHHHHHHH---cCCeeEEeecccccCCCCCCC-----CCCChHHHHHHHHhcCCceEeec--CcccCceeHHH
Q 020880          151 YGKSKVAAEKFIYEK---CSNFAILRSSIIYGPQTISPV-----PKSLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRD  220 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~---~~~~~ilR~~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D  220 (320)
                      |+.+|..+|++++.+   +.+++++||+.||||+.....     ...++..++... ..+.++.+++  +..++|||++|
T Consensus       172 Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~i~v~D  250 (372)
T 3slg_A          172 YACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHI-VRGENISLVDGGSQKRAFTYVDD  250 (372)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHH-HHTCCEEEGGGGCCEEECEEHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHH-HcCCCcEEeCCCceEEEEEEHHH
Confidence            999999999999998   678999999999999864311     122334444443 4677777776  46899999999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCC-CCcCHHHHHHHHHHHhCCCCCccccCCcc---------ccCCCCCCCCccc
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGP-DRVSRVQMAEVVAEIRGYSTSLIKPVSAS---------SVDRGVQSPADIS  290 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~  290 (320)
                      +|++++.+++++..  ...+++||++++ +.+|+.|+++.+.+.+|.+.++.......         .............
T Consensus       251 va~a~~~~~~~~~~--~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (372)
T 3slg_A          251 GISALMKIIENSNG--VATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRV  328 (372)
T ss_dssp             HHHHHHHHHHCGGG--TTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------CCCC
T ss_pred             HHHHHHHHHhcccC--cCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccceee
Confidence            99999999988531  123559999994 89999999999999999775432111000         0001112345678


Q ss_pred             cChHHHHhhcCCCc-cCHHHHHHHHHhhhcC
Q 020880          291 MDITKLVQTLNIDP-VTYKDGVKLTLAAEAT  320 (320)
Q Consensus       291 ~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~~  320 (320)
                      +|++|++++|||+| ++++++|+++++|+++
T Consensus       329 ~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~  359 (372)
T 3slg_A          329 PKIENTMQELGWAPQFTFDDALRQIFEAYRG  359 (372)
T ss_dssp             BCCHHHHHHHTCCCCCCHHHHHHHHHHHHTT
T ss_pred             cCHHHHHHHcCCCCCCCHHHHHHHHHHHHHH
Confidence            89999999999999 7999999999999874

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-48  Score=341.16  Aligned_cols=303  Identities=19%  Similarity=0.210  Sum_probs=244.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----CCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      +|+|||||||||||++++++|+++|   ++|++++|+.+.........    +..+.++.+|++|++++.++++.. ++|
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d   80 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAHG---YDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAH-PIT   80 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHS-CCC
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHCC---CcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhcc-CCc
Confidence            5799999999999999999999999   89999999876654433221    456888999999999999988863 899


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHH
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVA  157 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~  157 (320)
                      +|||+||.........++...++.|+.++. ++++++++.++++|||+||.++||.... +++|+++..|.++|+.+|..
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~  159 (341)
T 3enk_A           81 AAIHFAALKAVGESVAKPIEYYRNNLDSLL-SLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLM  159 (341)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHHHHHH-HHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHH
T ss_pred             EEEECccccccCccccChHHHHHHHHHHHH-HHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHH
Confidence            999999987665556677889999999996 9999999999999999999999986554 79999999999999999999


Q ss_pred             HHHHHHHH-----cCCeeEEeecccccCCCCCCC-------CCCChHHHHHHHH-hcCCceEeec--------CcccCce
Q 020880          158 AEKFIYEK-----CSNFAILRSSIIYGPQTISPV-------PKSLPIQWIDSVL-SKGEKVEFFH--------DECRCPV  216 (320)
Q Consensus       158 ~e~~~~~~-----~~~~~ilR~~~v~G~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~--------~~~~~~i  216 (320)
                      +|++++.+     +.+++++||+++|||+.....       ...+. .++.... ....++.++|        ++.++||
T Consensus       160 ~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i  238 (341)
T 3enk_A          160 AEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLM-PYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYI  238 (341)
T ss_dssp             HHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHH-HHHHHHHHTSSSCEEEECSCSSSTTSSCEECEE
T ss_pred             HHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchH-HHHHHHHhcCCCceEEeCCccCCCCCCeeEeeE
Confidence            99998875     267899999999999652111       12222 3443333 2335666655        4689999


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHH
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL  296 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  296 (320)
                      |++|+|++++.++++....  ..+++||+++++.+|+.|+++.+.+.+|.+.++...      +..........+|++|+
T Consensus       239 ~v~Dva~a~~~~~~~~~~~--~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~------~~~~~~~~~~~~d~~k~  310 (341)
T 3enk_A          239 HVVDLARGHIAALDALERR--DASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELV------ARRPGDVAECYANPAAA  310 (341)
T ss_dssp             EHHHHHHHHHHHHHHHHHH--TSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEE------CCCTTCCSEECBCCHHH
T ss_pred             EHHHHHHHHHHHHHhhhcC--CcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeC------CCCCCCccccccCHHHH
Confidence            9999999999999874211  125599999999999999999999999987654321      12223445678999999


Q ss_pred             HhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          297 VQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       297 ~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      +++|||+| ++++++|+++++|++
T Consensus       311 ~~~lG~~p~~~l~~~l~~~~~~~~  334 (341)
T 3enk_A          311 AETIGWKAERDLERMCADHWRWQE  334 (341)
T ss_dssp             HHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHH
Confidence            99999999 999999999999986

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=2.1e-48  Score=336.31  Aligned_cols=286  Identities=18%  Similarity=0.179  Sum_probs=237.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||+|||||||||||++|+++|+++|   ++|++++|++.... +     .+++++.+|++ ++++.++++   ++|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~-~-----~~~~~~~~Dl~-~~~~~~~~~---~~d~Vih   68 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDG---NTPIILTRSIGNKA-I-----NDYEYRVSDYT-LEDLINQLN---DVDAVVH   68 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCC-----------CCEEEECCCC-HHHHHHHTT---TCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeCCCCccc-C-----CceEEEEcccc-HHHHHHhhc---CCCEEEE
Confidence            5789999999999999999999999   89999999843332 1     16788999999 888888876   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-CCCcccCCCCCcchHHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKF  161 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-~~~~E~~~~~p~~~Y~~sK~~~e~~  161 (320)
                      ||+.....    ++...+++|+.++. +++++|++.++++|||+||.++|+... .+++|+++..|.+.|+.+|..+|++
T Consensus        69 ~a~~~~~~----~~~~~~~~n~~~~~-~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  143 (311)
T 3m2p_A           69 LAATRGSQ----GKISEFHDNEILTQ-NLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHI  143 (311)
T ss_dssp             CCCCCCSS----SCGGGTHHHHHHHH-HHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             ccccCCCC----ChHHHHHHHHHHHH-HHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHH
Confidence            99986543    67888999999995 999999999999999999999999765 4899999999999999999999999


Q ss_pred             HHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec--CcccCceeHHHHHHHHHHHHhhhhcc
Q 020880          162 IYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRDVVKIILALTNRWLSE  235 (320)
Q Consensus       162 ~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~a~~~~~~~~~~~~~  235 (320)
                      ++.+    +.+++++||+.+|||+....   .++..++.. +..+.++.+++  +..++|+|++|+|++++.+++++.  
T Consensus       144 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~-~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~--  217 (311)
T 3m2p_A          144 GNIYSRKKGLCIKNLRFAHLYGFNEKNN---YMINRFFRQ-AFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK--  217 (311)
T ss_dssp             HHHHHHHSCCEEEEEEECEEECSCC--C---CHHHHHHHH-HHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT--
T ss_pred             HHHHHHHcCCCEEEEeeCceeCcCCCCC---CHHHHHHHH-HHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC--
Confidence            8874    56899999999999987422   334444444 44678888765  468999999999999999998753  


Q ss_pred             ccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHH
Q 020880          236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLT  314 (320)
Q Consensus       236 ~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~  314 (320)
                         .+++||+++++.+|+.|+++.+.+.+|.+..+.. .+..    .........+|++|++++|||+| ++++++|+++
T Consensus       218 ---~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~~~----~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~  289 (311)
T 3m2p_A          218 ---VSGTFNIGSGDALTNYEVANTINNAFGNKDNLLV-KNPN----ANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEI  289 (311)
T ss_dssp             ---CCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEE-CSSS----BCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHH
T ss_pred             ---CCCeEEeCCCCcccHHHHHHHHHHHhCCCCccee-cCCC----CCCCcCceecCHHHHHHHhCCCcccCHHHHHHHH
Confidence               3459999999999999999999999998765432 1110    22345678899999999999999 6999999999


Q ss_pred             HhhhcC
Q 020880          315 LAAEAT  320 (320)
Q Consensus       315 i~~~~~  320 (320)
                      ++|++.
T Consensus       290 ~~~~~~  295 (311)
T 3m2p_A          290 HLLMRG  295 (311)
T ss_dssp             HHHHCC
T ss_pred             HHHHHh
Confidence            999874

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=1.8e-48  Score=336.92  Aligned_cols=298  Identities=26%  Similarity=0.331  Sum_probs=240.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|||||||||||++|+++|+++|   ++|++++|+++......   ...++++.+|+.|.+ +.++++   + |+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~---~~~~~~~~~Dl~d~~-~~~~~~---~-d~vih~   69 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELG---YEVVVVDNLSSGRREFV---NPSAELHVRDLKDYS-WGAGIK---G-DVVFHF   69 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECCCSSCCGGGS---CTTSEEECCCTTSTT-TTTTCC---C-SEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCC---CEEEEEeCCCCCchhhc---CCCceEEECccccHH-HHhhcC---C-CEEEEC
Confidence            589999999999999999999999   89999999876544332   356888999999988 766665   5 999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFI  162 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~e~~~  162 (320)
                      |+......+..++...+++|+.++. +++++|++.++++|||+||.++||.... +++|+++..|.+.|+.+|..+|+++
T Consensus        70 A~~~~~~~~~~~~~~~~~~n~~~~~-~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  148 (312)
T 3ko8_A           70 AANPEVRLSTTEPIVHFNENVVATF-NVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMC  148 (312)
T ss_dssp             CSSCSSSGGGSCHHHHHHHHHHHHH-HHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCCchhhhhCHHHHHHHHHHHHH-HHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Confidence            9977666677788999999999996 9999999999999999999999997654 8999999999999999999999988


Q ss_pred             HHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHhhhhccc
Q 020880          163 YEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRWLSED  236 (320)
Q Consensus       163 ~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~  236 (320)
                      +.+    +.+++++||+++|||+..    ...+..++........++.+.++  ..++|+|++|+|++++.+++++... 
T Consensus       149 ~~~~~~~g~~~~~lrp~~v~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~-  223 (312)
T 3ko8_A          149 ATYARLFGVRCLAVRYANVVGPRLR----HGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEM-  223 (312)
T ss_dssp             HHHHHHHCCEEEEEEECEEECTTCC----SSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHS-
T ss_pred             HHHHHHhCCCEEEEeeccccCcCCC----CChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhcccc-
Confidence            764    678999999999999863    23444566665555567767665  6899999999999999999873211 


Q ss_pred             cccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccc-cCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHH
Q 020880          237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASS-VDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLT  314 (320)
Q Consensus       237 ~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~  314 (320)
                      ...+++||+++++.+|+.|+++.+.+.+|.+..+.. .+... ............+|++|+++.|||+| ++++++|+++
T Consensus       224 ~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~  302 (312)
T 3ko8_A          224 DAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRL-VPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKT  302 (312)
T ss_dssp             CCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEE-C----------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHHH
T ss_pred             CCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCceee-cCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHH
Confidence            123559999999999999999999999998765432 22111 11112234567899999999999999 7999999999


Q ss_pred             Hhhhc
Q 020880          315 LAAEA  319 (320)
Q Consensus       315 i~~~~  319 (320)
                      ++|++
T Consensus       303 ~~~~~  307 (312)
T 3ko8_A          303 AEDLA  307 (312)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99985

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-48  Score=331.56  Aligned_cols=279  Identities=24%  Similarity=0.356  Sum_probs=239.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|||||||||||++++++|+++|   ++|++++|.                  .+|++|++.+.++++.. ++|+|||+
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~------------------~~D~~d~~~~~~~~~~~-~~d~vi~~   63 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEE---YDIYPFDKK------------------LLDITNISQVQQVVQEI-RPHIIIHC   63 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTT---EEEEEECTT------------------TSCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCC---CEEEEeccc------------------ccCCCCHHHHHHHHHhc-CCCEEEEC
Confidence            489999999999999999999999   899999983                  47999999999988865 79999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-CCCcccCCCCCcchHHHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFI  162 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-~~~~E~~~~~p~~~Y~~sK~~~e~~~  162 (320)
                      |+......+..+++..+++|+.++. +++++|++.++ ||||+||.++|+... .+++|+++..|.++|+.+|..+|+++
T Consensus        64 a~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  141 (287)
T 3sc6_A           64 AAYTKVDQAEKERDLAYVINAIGAR-NVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFV  141 (287)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHH-HHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CcccChHHHhcCHHHHHHHHHHHHH-HHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            9988766666788999999999996 99999999998 799999999998665 48999999999999999999999999


Q ss_pred             HHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCce
Q 020880          163 YEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL  242 (320)
Q Consensus       163 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  242 (320)
                      +.++.+++++||+.+|||+..     .++..++ .....+.++.+.+++.++|+|++|+|++++.+++++.      +++
T Consensus       142 ~~~~~~~~ilR~~~v~G~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~------~~~  209 (287)
T 3sc6_A          142 KELHNKYFIVRTSWLYGKYGN-----NFVKTMI-RLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL------YGT  209 (287)
T ss_dssp             HHHCSSEEEEEECSEECSSSC-----CHHHHHH-HHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC------CEE
T ss_pred             HHhCCCcEEEeeeeecCCCCC-----cHHHHHH-HHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC------CCe
Confidence            999999999999999999752     2333333 4455688888888899999999999999999998743      449


Q ss_pred             eEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHHHhhhcC
Q 020880          243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLAAEAT  320 (320)
Q Consensus       243 ~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~~  320 (320)
                      ||+++++.+|+.|+++.+.+.+|.+..+. +.+..........+....+|++|++ .|||+| ++++++|+++++|++.
T Consensus       210 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~~~  286 (287)
T 3sc6_A          210 YHVSNTGSCSWFEFAKKIFSYANMKVNVL-PVSTEEFGAAAARPKYSIFQHNMLR-LNGFLQMPSWEEGLERFFIETKS  286 (287)
T ss_dssp             EECCCBSCEEHHHHHHHHHHHHTCCCEEE-EECHHHHCCSSCCCSBCCBCCHHHH-HTTCCCCCBHHHHHHHHHHHTC-
T ss_pred             EEEcCCCcccHHHHHHHHHHHcCCCccee-eeehhhcCcccCCCCcccccHHHHH-hhCCCCCccHHHHHHHHHHHHhc
Confidence            99999999999999999999999876543 3333222333445667889999998 899999 9999999999999863

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-47  Score=332.01  Aligned_cols=292  Identities=21%  Similarity=0.280  Sum_probs=231.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||+|||||||||||++|+++|+++|   ..|.+..|+......    ....+.++.+|++| +++.++++   ++|+|||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g---~~v~~~~~~~~~~~~----~~~~~~~~~~Dl~~-~~~~~~~~---~~d~vih   69 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN---EIVVIDNLSSGNEEF----VNEAARLVKADLAA-DDIKDYLK---GAEEVWH   69 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS---CEEEECCCSSCCGGG----SCTTEEEECCCTTT-SCCHHHHT---TCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC---CEEEEEcCCCCChhh----cCCCcEEEECcCCh-HHHHHHhc---CCCEEEE
Confidence            5789999999999999999999999   555555554433322    23568889999999 88888887   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKF  161 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~e~~  161 (320)
                      +|+......+..+++..+++|+.++. +++++|++.++++|||+||.++||.... +++|+++..|.+.|+.+|..+|.+
T Consensus        70 ~a~~~~~~~~~~~~~~~~~~nv~~~~-~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~  148 (313)
T 3ehe_A           70 IAANPDVRIGAENPDEIYRNNVLATY-RLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEAL  148 (313)
T ss_dssp             CCCCCCCC-CCCCHHHHHHHHHHHHH-HHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CCCCCChhhhhhCHHHHHHHHHHHHH-HHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            99976666666788999999999996 9999999999999999999999997654 889999999999999999999998


Q ss_pred             HHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHhhhhcc
Q 020880          162 IYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRWLSE  235 (320)
Q Consensus       162 ~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~  235 (320)
                      ++.+    +.+++++||+.||||+..    ...+..++......+.++.+.++  ..++|||++|+|++++.+++...  
T Consensus       149 ~~~~~~~~g~~~~ilRp~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~--  222 (313)
T 3ehe_A          149 IESYCHTFDMQAWIYRFANVIGRRST----HGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDE--  222 (313)
T ss_dssp             HHHHHHHTTCEEEEEECSCEESTTCC----CSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCS--
T ss_pred             HHHHHHhcCCCEEEEeeccccCcCCC----cChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCC--
Confidence            8764    568899999999999864    23444566666655567777765  58999999999999999998422  


Q ss_pred             ccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHH
Q 020880          236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLT  314 (320)
Q Consensus       236 ~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~  314 (320)
                         .+++||+++++.+|+.|+++.+.+.+|.++.+... +..  ...........+|++|++ .|||+| ++++++|+++
T Consensus       223 ---~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~-~~~--~~~~~~~~~~~~d~~k~~-~lG~~p~~~~~e~l~~~  295 (313)
T 3ehe_A          223 ---RVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFT-GGD--RGWKGDVPVMLLSIEKLK-RLGWKPRYNSEEAVRMA  295 (313)
T ss_dssp             ---SEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC---------------CCBCCHHHH-HHTCCCSCCHHHHHHHH
T ss_pred             ---CCceEEECCCCCeeHHHHHHHHHHHhCCCCceEEC-CCc--cCCccccceeccCHHHHH-HcCCCCCCCHHHHHHHH
Confidence               24599999999999999999999999987654321 110  011123345789999995 589999 8999999999


Q ss_pred             Hhhhc
Q 020880          315 LAAEA  319 (320)
Q Consensus       315 i~~~~  319 (320)
                      ++|++
T Consensus       296 ~~~~~  300 (313)
T 3ehe_A          296 VRDLV  300 (313)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=2.7e-47  Score=332.09  Aligned_cols=301  Identities=22%  Similarity=0.251  Sum_probs=238.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||+|||||||||||++|+++|+++|   ++|++++|+......   .+..+++++.+|++|++++.++++.. ++|+|||
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vih   73 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEG---LSVVVVDNLQTGHED---AITEGAKFYNGDLRDKAFLRDVFTQE-NIEAVMH   73 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCGG---GSCTTSEEEECCTTCHHHHHHHHHHS-CEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeCCCcCchh---hcCCCcEEEECCCCCHHHHHHHHhhc-CCCEEEE
Confidence            5799999999999999999999999   899999987654322   22336788999999999998888753 7999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-CCCcccCCCCCcchHHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKF  161 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-~~~~E~~~~~p~~~Y~~sK~~~e~~  161 (320)
                      +|+......+..+++..+++|+.++. +++++|++.++++|||+||.++|+... .+++|+++..|.+.|+.+|..+|++
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~n~~~~~-~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~  152 (330)
T 2c20_A           74 FAADSLVGVSMEKPLQYYNNNVYGAL-CLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKM  152 (330)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHH-HHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             CCcccCccccccCHHHHHHHHhHHHH-HHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHH
Confidence            99986544445577889999999996 999999999999999999999998654 4899999999999999999999999


Q ss_pred             HHHH----cCCeeEEeecccccCCCCCCC------CCCChHHHHHHHHhcCCceEeec--------CcccCceeHHHHHH
Q 020880          162 IYEK----CSNFAILRSSIIYGPQTISPV------PKSLPIQWIDSVLSKGEKVEFFH--------DECRCPVYVRDVVK  223 (320)
Q Consensus       162 ~~~~----~~~~~ilR~~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~v~D~a~  223 (320)
                      ++.+    +.+++++||+.+|||+.....      ...++..++......+..+.++|        +..++|||++|+|+
T Consensus       153 ~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~  232 (330)
T 2c20_A          153 LHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVA  232 (330)
T ss_dssp             HHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHH
T ss_pred             HHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHH
Confidence            8875    567899999999999742111      12223223332232344566654        35789999999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCC
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID  303 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~  303 (320)
                      +++.+++++...+  .+++||+++++.+|+.|+++.+.+.+|.+.++.. .+     ..........+|++|++++|||+
T Consensus       233 a~~~~~~~~~~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~-----~~~~~~~~~~~d~~k~~~~lG~~  304 (330)
T 2c20_A          233 AHFLGLKDLQNGG--ESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEV-AP-----RRAGDPARLVASSQKAKEKLGWD  304 (330)
T ss_dssp             HHHHHHHHHHTTC--CCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEE-EC-----CCSSCCSEECBCCHHHHHHHCCC
T ss_pred             HHHHHHhccccCC--CCCeEEeCCCCCccHHHHHHHHHHHhCCCCceee-CC-----CCCCcccccccCHHHHHHHhCCC
Confidence            9999998754321  2459999999999999999999999997754321 11     11223456789999999999999


Q ss_pred             c-c-CHHHHHHHHHhhhc
Q 020880          304 P-V-TYKDGVKLTLAAEA  319 (320)
Q Consensus       304 ~-~-~~~~~l~~~i~~~~  319 (320)
                      | + +++++|+++++|++
T Consensus       305 p~~~~l~~~l~~~~~~~~  322 (330)
T 2c20_A          305 PRYVNVKTIIEHAWNWHQ  322 (330)
T ss_dssp             CSCCCHHHHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHHHH
Confidence            9 6 99999999999985

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=1.3e-47  Score=338.26  Aligned_cols=297  Identities=20%  Similarity=0.219  Sum_probs=237.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhh--ccCCCceEEEecCCCCCh----------hhhhhhCCCcceEEEeeCCCcccHHH
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSE--IEGKPYDVAATHHSTPLP----------QLLLDALPHSFVFFDVDLKSGSGFDA   69 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~--~g~~v~~v~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dl~d~~~~~~   69 (320)
                      ++|+|||||||||||++|+++|++  +|   ++|++++|+....          .......+..+.++.+|++|++++.+
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPK---AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTT---SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCC---CeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            368999999999999999999999  88   8999999976411          11111123467889999999998888


Q ss_pred             HHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           70 VALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        70 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      +  ...++|+||||||....  +..+++..+++|+.++. +++++|++.+++ |||+||+++||....+++|+++..|.+
T Consensus        86 ~--~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~-~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~  159 (362)
T 3sxp_A           86 L--EKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFL-NLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPEN  159 (362)
T ss_dssp             H--TTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHH-HHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSS
T ss_pred             h--hccCCCEEEECCccCCc--cccCHHHHHHHHHHHHH-HHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCC
Confidence            7  12489999999996533  45678999999999996 999999999985 999999999998777999999999999


Q ss_pred             hHHHHHHHHHHHHHHHc--CCeeEEeecccccCCCCCCCC-CCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHH
Q 020880          150 VYGKSKVAAEKFIYEKC--SNFAILRSSIIYGPQTISPVP-KSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKI  224 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~--~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~  224 (320)
                      +|+.+|..+|.+++.+.  .+++++||+++|||+...... ..++..++.. +..+.++.++++  ..++|+|++|+|++
T Consensus       160 ~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~i~v~Dva~a  238 (362)
T 3sxp_A          160 VYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALG-AMAFKEVKLFEFGEQLRDFVYIEDVIQA  238 (362)
T ss_dssp             HHHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHH-HHTTSEEECSGGGCCEEECEEHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHH-HHhCCCeEEECCCCeEEccEEHHHHHHH
Confidence            99999999999999987  468999999999998742211 1334444444 446777777654  68999999999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP  304 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~  304 (320)
                      ++.+++.+.     .+ +||+++++.+|+.|+++.+.+.+| +.++. ..+..    .........+|++|+++.|||+|
T Consensus       239 i~~~~~~~~-----~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~-~~~~~----~~~~~~~~~~d~~k~~~~lG~~p  306 (362)
T 3sxp_A          239 NVKAMKAQK-----SG-VYNVGYSQARSYNEIVSILKEHLG-DFKVT-YIKNP----YAFFQKHTQAHIEPTILDLDYTP  306 (362)
T ss_dssp             HHHHTTCSS-----CE-EEEESCSCEEEHHHHHHHHHHHHC-CCEEE-CCC-----------CCCCBCCHHHHHHHCCCC
T ss_pred             HHHHHhcCC-----CC-EEEeCCCCCccHHHHHHHHHHHcC-CCceE-ECCCC----CcCcccceecCHHHHHHHhCCCC
Confidence            999998742     23 999999999999999999999999 54432 22211    02345668899999999999999


Q ss_pred             -cCHHHHHHHHHhhhcC
Q 020880          305 -VTYKDGVKLTLAAEAT  320 (320)
Q Consensus       305 -~~~~~~l~~~i~~~~~  320 (320)
                       ++++++|+++++|+++
T Consensus       307 ~~~l~e~l~~~~~~~~~  323 (362)
T 3sxp_A          307 LYDLESGIKDYLPHIHA  323 (362)
T ss_dssp             CCCHHHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHHHH
Confidence             7999999999999863

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=3.5e-47  Score=334.32  Aligned_cols=304  Identities=20%  Similarity=0.183  Sum_probs=240.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh----hhhhhC----CCcceEEEeeCCCcccHHHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ----LLLDAL----PHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~----~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      |+||+|||||||||||++|+++|+++|   ++|++++|+.....    .+.+.+    ..++.++.+|++|++++.++++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLD---QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc
Confidence            357899999999999999999999999   89999999764321    111111    1467889999999998888887


Q ss_pred             HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchH
Q 020880           73 KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVY  151 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y  151 (320)
                         ++|+|||||+......+..+++..+++|+.++. +++++|.+.++++|||+||.++|+.... +++|+++..|.+.|
T Consensus       102 ---~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~-~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y  177 (352)
T 1sb8_A          102 ---GVDYVLHQAALGSVPRSINDPITSNATNIDGFL-NMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPY  177 (352)
T ss_dssp             ---TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHH-HHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHH
T ss_pred             ---CCCEEEECCcccCchhhhhCHHHHHHHHHHHHH-HHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChh
Confidence               899999999986544445678889999999996 9999999999999999999999997654 88999999999999


Q ss_pred             HHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCC-CCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHH
Q 020880          152 GKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPV-PKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKI  224 (320)
Q Consensus       152 ~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~  224 (320)
                      +.+|..+|.+++.+    +.+++++||+.||||...... ...++..++..+. .+.++.++++  ..++|+|++|+|++
T Consensus       178 ~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~g~~~~~~i~v~Dva~a  256 (352)
T 1sb8_A          178 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMI-QGDDVYINGDGETSRDFCYIENTVQA  256 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHH-HTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHH-CCCCcEEeCCCCceEeeEEHHHHHHH
Confidence            99999999988754    679999999999999864221 1123334444433 5666666654  57899999999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHh---CCCCCccccCCccccCCCCCCCCccccChHHHHhhcC
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIR---GYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN  301 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg  301 (320)
                      ++.++....   ...+++||+++++.+|+.|+++.+.+.+   |.+......    .............+|++|++++||
T Consensus       257 ~~~~~~~~~---~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~----~~~~~~~~~~~~~~d~~k~~~~lG  329 (352)
T 1sb8_A          257 NLLAATAGL---DARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPV----YRDFREGDVRHSLADISKAAKLLG  329 (352)
T ss_dssp             HHHHHTCCG---GGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCE----EECCCTTCCSBCCBCCHHHHHHTC
T ss_pred             HHHHHhccc---cCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCce----ecCCCccchhhccCCHHHHHHHhC
Confidence            999887621   1235599999999999999999999999   876543210    011112234567889999999999


Q ss_pred             CCc-cCHHHHHHHHHhhhc
Q 020880          302 IDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       302 ~~~-~~~~~~l~~~i~~~~  319 (320)
                      |+| ++++|+|+++++|++
T Consensus       330 ~~p~~~~~e~l~~~~~~~~  348 (352)
T 1sb8_A          330 YAPKYDVSAGVALAMPWYI  348 (352)
T ss_dssp             CCCCCCHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHH
Confidence            999 899999999999985

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=3.5e-47  Score=334.95  Aligned_cols=305  Identities=17%  Similarity=0.208  Sum_probs=240.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC--CCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      .+|+|||||||||||++|+++|+++|   ++|++++|+.+....+....  ..++.++.+|++|++++.++++.. ++|+
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~   83 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-QPEI   83 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-CCSE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCC---CeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-CCCE
Confidence            46899999999999999999999999   89999999876554333221  346888999999999999988854 6999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-CceEEEeechhhhcccCC--CCcccCCCCCcchHHHHHH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-ENLLIHLSTDQVYEGVKS--FYKEEDEIAPVNVYGKSKV  156 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~~~v~~Ss~~vy~~~~~--~~~E~~~~~p~~~Y~~sK~  156 (320)
                      |||+||......+..+++..+++|+.++. +++++|.+.+ +++|||+||.++||....  +++|+++..|.+.|+.+|.
T Consensus        84 vih~A~~~~~~~~~~~~~~~~~~n~~~~~-~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~  162 (357)
T 1rkx_A           84 VFHMAAQPLVRLSYSEPVETYSTNVMGTV-YLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKG  162 (357)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHH-HHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHH
T ss_pred             EEECCCCcccccchhCHHHHHHHHHHHHH-HHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHH
Confidence            99999975444445677889999999996 9999999876 789999999999997654  7889988889999999999


Q ss_pred             HHHHHHHHH-------------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec-CcccCceeHHHHH
Q 020880          157 AAEKFIYEK-------------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH-DECRCPVYVRDVV  222 (320)
Q Consensus       157 ~~e~~~~~~-------------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~D~a  222 (320)
                      .+|++++.+             +.+++++||+.||||+...  ...++..++.. +..+.++.+.+ +..++|||++|+|
T Consensus       163 ~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~--~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~v~v~Dva  239 (357)
T 1rkx_A          163 CAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA--LDRIVPDILRA-FEQSQPVIIRNPHAIRPWQHVLEPL  239 (357)
T ss_dssp             HHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC--SSCHHHHHHHH-HHTTCCEECSCTTCEECCEETHHHH
T ss_pred             HHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCc--cccHHHHHHHH-HhcCCCEEECCCCCeeccEeHHHHH
Confidence            999988765             6788999999999997632  12344444544 34566666553 4688999999999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCC--CCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhc
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGP--DRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL  300 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~--~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  300 (320)
                      ++++.++++....+...+++||++++  +.+|+.|+++.+.+.+|.+..+... +.    ..........+|++|++++|
T Consensus       240 ~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~-~~----~~~~~~~~~~~d~~k~~~~l  314 (357)
T 1rkx_A          240 SGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLD-GN----AHPHEAHYLKLDCSKAKMQL  314 (357)
T ss_dssp             HHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC------------CCCCCCBCCHHHHHHH
T ss_pred             HHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccC-CC----CCCcCcccccCCHHHHHHHh
Confidence            99999987532111123559999974  6899999999999999987554211 11    01223456789999999999


Q ss_pred             CCCc-cCHHHHHHHHHhhhc
Q 020880          301 NIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       301 g~~~-~~~~~~l~~~i~~~~  319 (320)
                      ||+| ++++++|+++++|++
T Consensus       315 G~~p~~~l~e~l~~~~~~~~  334 (357)
T 1rkx_A          315 GWHPRWNLNTTLEYIVGWHK  334 (357)
T ss_dssp             CCCCCCCHHHHHHHHHHHHH
T ss_pred             CCCcCCcHHHHHHHHHHHHH
Confidence            9999 899999999999985

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=4.3e-47  Score=326.39  Aligned_cols=289  Identities=22%  Similarity=0.310  Sum_probs=236.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|||||||||||++|+++|+ +|   ++|++++|++.              ++.+|++|++++.++++.. ++|+|||+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g---~~V~~~~r~~~--------------~~~~D~~d~~~~~~~~~~~-~~d~vih~   61 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PV---GNLIALDVHSK--------------EFCGDFSNPKGVAETVRKL-RPDVIVNA   61 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TT---SEEEEECTTCS--------------SSCCCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cC---CeEEEeccccc--------------cccccCCCHHHHHHHHHhc-CCCEEEEC
Confidence            479999999999999999999 89   89999999752              2578999999999888743 69999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFI  162 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~e~~~  162 (320)
                      |+......+..+++..+++|+.++. +++++|++.++ +|||+||.++|+.... +++|+++..|.+.|+.+|..+|+++
T Consensus        62 a~~~~~~~~~~~~~~~~~~n~~~~~-~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  139 (299)
T 1n2s_A           62 AAHTAVDKAESEPELAQLLNATSVE-AIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKAL  139 (299)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHH-HHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             cccCCHhhhhcCHHHHHHHHHHHHH-HHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence            9987654456678899999999995 99999999888 8999999999997655 8999999999999999999999999


Q ss_pred             HHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCce
Q 020880          163 YEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL  242 (320)
Q Consensus       163 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  242 (320)
                      +.++.+++++||+.+|||+..     .+...++. .+..+.++.+.+++.++|+|++|+|++++.+++++.... ..+++
T Consensus       140 ~~~~~~~~ilRp~~v~G~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~-~~~~~  212 (299)
T 1n2s_A          140 QDNCPKHLIFRTSWVYAGKGN-----NFAKTMLR-LAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKP-EVAGL  212 (299)
T ss_dssp             HHHCSSEEEEEECSEECSSSC-----CHHHHHHH-HHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCG-GGCEE
T ss_pred             HHhCCCeEEEeeeeecCCCcC-----cHHHHHHH-HHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhcccc-ccCce
Confidence            999889999999999999753     23333443 344677787888889999999999999999998752100 02459


Q ss_pred             eEecCCCCcCHHHHHHHHHHHhCCCCC-----ccccCCccccCCCCCCCCccccChHHHHhhcCCCccCHHHHHHHHHhh
Q 020880          243 LNVGGPDRVSRVQMAEVVAEIRGYSTS-----LIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAA  317 (320)
Q Consensus       243 ~n~~~~~~~s~~e~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~i~~  317 (320)
                      ||+++++.+|+.|+++.+.+.+|.+.+     .+...+...+...........+|++|++++|||+|.+++++|+++++|
T Consensus       213 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~l~~~~~~  292 (299)
T 1n2s_A          213 YHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTE  292 (299)
T ss_dssp             EECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCCBHHHHHHHHHHH
T ss_pred             EEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999987631     111222111111222356688999999999999998899999999999


Q ss_pred             hcC
Q 020880          318 EAT  320 (320)
Q Consensus       318 ~~~  320 (320)
                      +++
T Consensus       293 ~~~  295 (299)
T 1n2s_A          293 MFT  295 (299)
T ss_dssp             HHS
T ss_pred             HHh
Confidence            864

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.3e-47  Score=329.67  Aligned_cols=291  Identities=19%  Similarity=0.136  Sum_probs=231.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |+||+|||||||||||++|+++|+++|   +      +.....        ..++++.+|++|++++.++++.. ++|+|
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~------~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~~-~~d~V   65 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGA---G------LPGEDW--------VFVSSKDADLTDTAQTRALFEKV-QPTHV   65 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTT---C------CTTCEE--------EECCTTTCCTTSHHHHHHHHHHS-CCSEE
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcC---C------cccccc--------cccCceecccCCHHHHHHHHhhc-CCCEE
Confidence            678999999999999999999999999   5      111110        12334578999999999999854 69999


Q ss_pred             EECCCccCc-cccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccC----CCCCcc-hHHH
Q 020880           81 VNCAALSVP-RVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEED----EIAPVN-VYGK  153 (320)
Q Consensus        81 ih~a~~~~~-~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~----~~~p~~-~Y~~  153 (320)
                      ||||+.... ..+..++...+++|+.++. +++++|++.++++|||+||.++||.... +++|++    +..|.+ +|+.
T Consensus        66 ih~A~~~~~~~~~~~~~~~~~~~nv~gt~-~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~  144 (319)
T 4b8w_A           66 IHLAAMVGGLFRNIKYNLDFWRKNVHMND-NVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSY  144 (319)
T ss_dssp             EECCCCCCCHHHHTTCHHHHHHHHHHHHH-HHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHH
T ss_pred             EECceecccccccccCHHHHHHHHHHHHH-HHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHH
Confidence            999998642 2345678889999999996 9999999999999999999999997655 889997    666666 6999


Q ss_pred             HHHHHHHHHHH----HcCCeeEEeecccccCCCCCCCC-CCChHHHHHHH---HhcCCceEeecC--cccCceeHHHHHH
Q 020880          154 SKVAAEKFIYE----KCSNFAILRSSIIYGPQTISPVP-KSLPIQWIDSV---LSKGEKVEFFHD--ECRCPVYVRDVVK  223 (320)
Q Consensus       154 sK~~~e~~~~~----~~~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~i~v~D~a~  223 (320)
                      +|..+|++++.    .+.+++++||+++|||+...... ..++..++..+   +..+.++.++++  ..++|||++|+|+
T Consensus       145 sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  224 (319)
T 4b8w_A          145 AKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQ  224 (319)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHH
Confidence            99999998876    46789999999999998753222 22333444442   446778887764  5899999999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCC
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID  303 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~  303 (320)
                      +++.+++++...   .+++||+++++.+|+.|+++.+.+.+|.+.++....      ..........+|++|++++|||+
T Consensus       225 a~~~~~~~~~~~---~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~------~~~~~~~~~~~d~~k~~~~lg~~  295 (319)
T 4b8w_A          225 LFIWVLREYNEV---EPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDT------TKSDGQFKKTASNSKLRTYLPDF  295 (319)
T ss_dssp             HHHHHHHHCCCS---SCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEET------TSCCCCSCCCBCCHHHHHHCTTC
T ss_pred             HHHHHHhccccC---CceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCC------CCCcCcccccCCHHHHHHhcCCC
Confidence            999999884322   245999999999999999999999999876543211      11223445689999999999999


Q ss_pred             c-cCHHHHHHHHHhhhc
Q 020880          304 P-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       304 ~-~~~~~~l~~~i~~~~  319 (320)
                      | ++++++|+++++|++
T Consensus       296 p~~~~~~~l~~~~~~~~  312 (319)
T 4b8w_A          296 RFTPFKQAVKETCAWFT  312 (319)
T ss_dssp             CCCCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH
Confidence            9 899999999999986

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=1.5e-46  Score=329.75  Aligned_cols=303  Identities=19%  Similarity=0.197  Sum_probs=237.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC------hh----hhhhhCCCcceEEEeeCCCcccHHHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL------PQ----LLLDALPHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~------~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      +|+|||||||||||++|+++|+++|   ++|++++|+...      ..    .+....+.+++++.+|++|++++.++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~   78 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAG---YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFK   78 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTT---CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHH
Confidence            5789999999999999999999999   889988876433      11    1111113467889999999999988887


Q ss_pred             HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-CCCcccCCCCC-cch
Q 020880           73 KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-SFYKEEDEIAP-VNV  150 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-~~~~E~~~~~p-~~~  150 (320)
                      .. ++|+|||+|+......+..+++..+++|+.++. +++++|++.++++|||+||.++|+... .+++|+++..| .+.
T Consensus        79 ~~-~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~  156 (348)
T 1ek6_A           79 KY-SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTI-QLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP  156 (348)
T ss_dssp             HC-CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHH-HHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSH
T ss_pred             hc-CCCEEEECCCCcCccchhhchHHHHHHHHHHHH-HHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCc
Confidence            64 799999999986544445577889999999996 999999999989999999999998654 48999998888 889


Q ss_pred             HHHHHHHHHHHHHHH---c--CCeeEEeecccccCCCCCC---C----CCCChHHHHHHHHh-cCCceEeec--------
Q 020880          151 YGKSKVAAEKFIYEK---C--SNFAILRSSIIYGPQTISP---V----PKSLPIQWIDSVLS-KGEKVEFFH--------  209 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~---~--~~~~ilR~~~v~G~~~~~~---~----~~~~~~~~~~~~~~-~~~~~~~~~--------  209 (320)
                      |+.+|..+|.+++.+   +  .+++++||+++|||+....   .    ...+.. .+..... .+.++.+++        
T Consensus       157 Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~g  235 (348)
T 1ek6_A          157 YGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMP-YVSQVAIGRREALNVFGNDYDTEDG  235 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHH-HHHHHHHTSSSCEEEECSCSSSSSS
T ss_pred             hHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHH-HHHHHHHhcCCCeEEeCCcccCCCC
Confidence            999999999998875   3  6889999999999964211   0    122333 3333343 566676654        


Q ss_pred             CcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCcc
Q 020880          210 DECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI  289 (320)
Q Consensus       210 ~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (320)
                      +..++|||++|+|++++.+++++..  ...+++||+++++.+|+.|+++.+.+.+|.+.+... .+     .........
T Consensus       236 ~~~~~~i~v~Dva~a~~~~~~~~~~--~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~-----~~~~~~~~~  307 (348)
T 1ek6_A          236 TGVRDYIHVVDLAKGHIAALRKLKE--QCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV-VA-----RREGDVAAC  307 (348)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHTT--TCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEE-EC-----CCTTCCSEE
T ss_pred             ceEEeeEEHHHHHHHHHHHHhcccc--cCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceee-CC-----CCCccchhh
Confidence            3578999999999999999987521  111259999999999999999999999998654321 11     112234467


Q ss_pred             ccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          290 SMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       290 ~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      .+|++|++++|||+| ++++++|+++++|++
T Consensus       308 ~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~  338 (348)
T 1ek6_A          308 YANPSLAQEELGWTAALGLDRMCEDLWRWQK  338 (348)
T ss_dssp             CBCCHHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred             ccCHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence            899999999999999 899999999999985

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=1.8e-47  Score=326.70  Aligned_cols=276  Identities=19%  Similarity=0.203  Sum_probs=225.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |+||+||||| +||||++|+++|+++|   ++|++++|+.+..       ..+++++.+|++|++++.++++  +++|+|
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g---~~V~~~~r~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~--~~~d~v   67 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQG---HEVTGLRRSAQPM-------PAGVQTLIADVTRPDTLASIVH--LRPEIL   67 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTT---CCEEEEECTTSCC-------CTTCCEEECCTTCGGGCTTGGG--GCCSEE
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCC---CEEEEEeCCcccc-------ccCCceEEccCCChHHHHHhhc--CCCCEE
Confidence            7889999999 5999999999999999   8999999986652       3578889999999999888877  259999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAE  159 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~e  159 (320)
                      ||+|+..     ..+++..+++|+.++. +++++|++.++++|||+||.++||.... +++|+++..|.+.|+.+|..+|
T Consensus        68 ih~a~~~-----~~~~~~~~~~n~~~~~-~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E  141 (286)
T 3gpi_A           68 VYCVAAS-----EYSDEHYRLSYVEGLR-NTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAE  141 (286)
T ss_dssp             EECHHHH-----HHC-----CCSHHHHH-HHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHH
T ss_pred             EEeCCCC-----CCCHHHHHHHHHHHHH-HHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHH
Confidence            9999863     2456788899999995 9999999999999999999999997655 7899999999999999999999


Q ss_pred             HHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhcccccc
Q 020880          160 KFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM  239 (320)
Q Consensus       160 ~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~  239 (320)
                      ++ +++ .+++++||+.+|||+..         .++..+. . ......++..++|||++|+|++++.+++++..  ...
T Consensus       142 ~~-~~~-~~~~ilR~~~v~G~~~~---------~~~~~~~-~-~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~--~~~  206 (286)
T 3gpi_A          142 AL-LAA-YSSTILRFSGIYGPGRL---------RMIRQAQ-T-PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSH--AVP  206 (286)
T ss_dssp             HH-GGG-SSEEEEEECEEEBTTBC---------HHHHHTT-C-GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTT--SCC
T ss_pred             HH-Hhc-CCeEEEecccccCCCch---------hHHHHHH-h-cccCCCcCceeEEEEHHHHHHHHHHHHhhhcc--CCC
Confidence            99 877 99999999999999863         2344333 2 33323345688999999999999999998521  123


Q ss_pred             CceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-c-CHHHHHHHHHhh
Q 020880          240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-V-TYKDGVKLTLAA  317 (320)
Q Consensus       240 ~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~-~~~~~l~~~i~~  317 (320)
                      +++||+++++.+|+.|+++.+.+.+|.+.++... +        .......+|++|++ +|||+| + +++++|+++++|
T Consensus       207 ~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~-~--------~~~~~~~~d~~k~~-~lG~~p~~~~l~e~l~~~~~~  276 (286)
T 3gpi_A          207 ERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGAT-P--------PVQGNKKLSNARLL-ASGYQLIYPDYVSGYGALLAA  276 (286)
T ss_dssp             CSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCC-C--------CBCSSCEECCHHHH-HTTCCCSSCSHHHHHHHHHHH
T ss_pred             CceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCC-c--------ccCCCeEeeHHHHH-HcCCCCcCCcHHHHHHHHHHH
Confidence            5599999999999999999999999987654311 1        23556789999997 899999 6 799999999999


Q ss_pred             hcC
Q 020880          318 EAT  320 (320)
Q Consensus       318 ~~~  320 (320)
                      ++.
T Consensus       277 ~~~  279 (286)
T 3gpi_A          277 MRE  279 (286)
T ss_dssp             HTC
T ss_pred             Hhc
Confidence            863

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=2.3e-46  Score=327.01  Aligned_cols=299  Identities=23%  Similarity=0.337  Sum_probs=236.2

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC--ChhhhhhhC--CCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP--LPQLLLDAL--PHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~--~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      |++|+|||||||||||++|+++|+++|+. ++|++++|...  ....+ ..+  ..+++++.+|++|++++.+++.   +
T Consensus         1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~-~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~   75 (336)
T 2hun_A            1 MHSMKLLVTGGMGFIGSNFIRYILEKHPD-WEVINIDKLGYGSNPANL-KDLEDDPRYTFVKGDVADYELVKELVR---K   75 (336)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHH---T
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHHhCCC-CEEEEEecCcccCchhHH-hhhccCCceEEEEcCCCCHHHHHHHhh---C
Confidence            77789999999999999999999998633 78999988642  22222 211  3467889999999999988885   8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccC-ceEEEeechhhhccc-CCCCcccCCCCCcchHHHH
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE-NLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKS  154 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~-~~~~~E~~~~~p~~~Y~~s  154 (320)
                      +|+|||+||......+..+++..+++|+.++. +++++|.+.+. ++|||+||.++||.. ..+++|+++..|.+.|+.+
T Consensus        76 ~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~-~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~s  154 (336)
T 2hun_A           76 VDGVVHLAAESHVDRSISSPEIFLHSNVIGTY-TLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSAT  154 (336)
T ss_dssp             CSEEEECCCCCCHHHHHHCTHHHHHHHHHHHH-HHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHH
T ss_pred             CCEEEECCCCcChhhhhhCHHHHHHHHHHHHH-HHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHH
Confidence            99999999986544445677889999999996 99999998764 699999999999965 4489999999999999999


Q ss_pred             HHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHH
Q 020880          155 KVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       155 K~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~  228 (320)
                      |..+|.+++.+    +.+++++||+.||||...   ...++..++... ..+.++.++++  ..++|+|++|+|++++.+
T Consensus       155 K~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  230 (336)
T 2hun_A          155 KAASDMLVLGWTRTYNLNASITRCTNNYGPYQF---PEKLIPKTIIRA-SLGLKIPIYGTGKNVRDWLYVEDHVRAIELV  230 (336)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEEECEEESTTCC---TTSHHHHHHHHH-HTTCCEEEETC---CEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCC---cCchHHHHHHHH-HcCCCceEeCCCCceeeeEEHHHHHHHHHHH
Confidence            99999988764    568899999999999863   123333444443 35667777654  578999999999999999


Q ss_pred             HhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCH
Q 020880          229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTY  307 (320)
Q Consensus       229 ~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~  307 (320)
                      ++...     .+++||+++++.+|+.|+++.+.+.+|.+.+.+...+     ........+.+|++|++++|||+| +++
T Consensus       231 ~~~~~-----~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~~~~~~~~~d~~k~~~~lG~~p~~~~  300 (336)
T 2hun_A          231 LLKGE-----SREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVE-----DRPGHDLRYSLDSWKITRDLKWRPKYTF  300 (336)
T ss_dssp             HHHCC-----TTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEEC-----CCTTCCCCCCBCCHHHHHHHCCCCSSCH
T ss_pred             HhCCC-----CCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccC-----CCCCchhhhcCCHHHHHHHhCCCCCCCH
Confidence            87642     2459999999999999999999999998754322211     111123346789999999999999 899


Q ss_pred             HHHHHHHHhhhc
Q 020880          308 KDGVKLTLAAEA  319 (320)
Q Consensus       308 ~~~l~~~i~~~~  319 (320)
                      +++|+++++|++
T Consensus       301 ~~~l~~~~~~~~  312 (336)
T 2hun_A          301 DEGIKKTIDWYL  312 (336)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999999975

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=1.9e-46  Score=329.17  Aligned_cols=297  Identities=21%  Similarity=0.264  Sum_probs=235.8

Q ss_pred             CC-CcEEEEEcCCChhhHHHHHHHhhc--cCCCceEEEecCCCCC--hhhhhhhCCCcceEEEeeCCCcccHHHHHHHhC
Q 020880            1 MS-KKRVLVVGGTGYLGQHLLQGLSEI--EGKPYDVAATHHSTPL--PQLLLDALPHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         1 m~-~~~ilItGatG~IG~~l~~~L~~~--g~~v~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      |+ ||+|||||||||||++|+++|+++  |   ++|++++|+...  ...+......+++++.+|++|++++.++++   
T Consensus         1 Ms~m~~vlVTGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   74 (348)
T 1oc2_A            1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPD---VHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA---   74 (348)
T ss_dssp             --CCSEEEEETTTSHHHHHHHHHHHHHCTT---CEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT---
T ss_pred             CCcCcEEEEeCCccHHHHHHHHHHHHhCCC---CEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhh---
Confidence            65 689999999999999999999999  7   899999997532  222211113568889999999999888887   


Q ss_pred             CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-------------CCCccc
Q 020880           76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-------------SFYKEE  142 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-------------~~~~E~  142 (320)
                      ++|+||||||......+..+++..+++|+.++. +++++|.+.++ +|||+||.++||...             .+++|+
T Consensus        75 ~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~-~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~  152 (348)
T 1oc2_A           75 KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTY-TLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAE  152 (348)
T ss_dssp             TCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHH-HHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTT
T ss_pred             cCCEEEECCcccCccchhhCHHHHHHHHHHHHH-HHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCC
Confidence            789999999987554445678889999999996 99999999888 999999999998642             578999


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCce
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPV  216 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i  216 (320)
                      ++..|.+.|+.+|..+|.+++.+    +.+++++||+.+|||...   ...++..++.... .+.++.++++  ..++|+
T Consensus       153 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i  228 (348)
T 1oc2_A          153 TNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQH---IEKFIPRQITNIL-AGIKPKLYGEGKNVRDWI  228 (348)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCC---TTSHHHHHHHHHH-HTCCCEEETTSCCEEECE
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCC---ccchHHHHHHHHH-cCCCceEecCCCceEeeE
Confidence            99889999999999999988764    678999999999999863   1233334444443 4666666554  578999


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHH
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL  296 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  296 (320)
                      |++|+|++++.+++.+.     .+++||+++++.+|+.|+++.+.+.+|.+.+.+...+     ........+.+|++|+
T Consensus       229 ~v~Dva~~~~~~~~~~~-----~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~~~~~~~~~d~~k~  298 (348)
T 1oc2_A          229 HTNDHSTGVWAILTKGR-----MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVT-----DRAGHDLRYAIDASKL  298 (348)
T ss_dssp             EHHHHHHHHHHHHHHCC-----TTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEEC-----CCTTCCCBCCBCCHHH
T ss_pred             EHHHHHHHHHHHhhCCC-----CCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCC-----CCCCcccccccCHHHH
Confidence            99999999999997642     2459999999999999999999999998754221111     1111234567999999


Q ss_pred             HhhcCCCc-cC-HHHHHHHHHhhhc
Q 020880          297 VQTLNIDP-VT-YKDGVKLTLAAEA  319 (320)
Q Consensus       297 ~~~lg~~~-~~-~~~~l~~~i~~~~  319 (320)
                      +++|||+| ++ ++++|+++++|++
T Consensus       299 ~~~lG~~p~~~~~~~~l~~~~~~~~  323 (348)
T 1oc2_A          299 RDELGWTPQFTDFSEGLEETIQWYT  323 (348)
T ss_dssp             HHHHCCCCSCCCHHHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCcHHHHHHHHHHHHH
Confidence            99999999 77 9999999999975

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-46  Score=327.90  Aligned_cols=303  Identities=16%  Similarity=0.083  Sum_probs=237.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh-hhhhhC--CCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-LLLDAL--PHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~-~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      +|+|||||||||||++|+++|+++|   ++|++++|+.+... ......  ..+++++.+|++|++++.++++.. ++|+
T Consensus        14 ~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~   89 (335)
T 1rpn_A           14 TRSALVTGITGQDGAYLAKLLLEKG---YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-QPQE   89 (335)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-CCSE
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-CCCE
Confidence            6899999999999999999999999   89999999865421 111111  246788999999999999988865 6899


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccC-ceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE-NLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVA  157 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~  157 (320)
                      |||||+......+..++...+++|+.++. +++++|.+.++ ++|||+||.++|+.... +++|+++..|.+.|+.+|..
T Consensus        90 Vih~A~~~~~~~~~~~~~~~~~~n~~~~~-~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~  168 (335)
T 1rpn_A           90 VYNLAAQSFVGASWNQPVTTGVVDGLGVT-HLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLY  168 (335)
T ss_dssp             EEECCSCCCHHHHTTSHHHHHHHHTHHHH-HHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred             EEECccccchhhhhhChHHHHHHHHHHHH-HHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHH
Confidence            99999986654445678889999999996 99999999886 89999999999997655 88999999999999999999


Q ss_pred             HHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCC-ceEeec--CcccCceeHHHHHHHHHHHHh
Q 020880          158 AEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGE-KVEFFH--DECRCPVYVRDVVKIILALTN  230 (320)
Q Consensus       158 ~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~i~v~D~a~~~~~~~~  230 (320)
                      +|.+++.+    +.+++++||+.+|||+.........+..++.... .+. +....+  +..++|+|++|+|++++.+++
T Consensus       169 ~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~-~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~  247 (335)
T 1rpn_A          169 GHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIK-LGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQ  247 (335)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHH-TTSCSCEEESCTTCEEECEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHH-cCCCceEEeCCCcceeceEEHHHHHHHHHHHHh
Confidence            99988764    6789999999999998632111111223343333 444 333444  468999999999999999998


Q ss_pred             hhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHH
Q 020880          231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKD  309 (320)
Q Consensus       231 ~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~  309 (320)
                      ++.      .++||+++++.+|+.|+++.+.+.+|.+..........  ...........+|++|++++|||+| +++++
T Consensus       248 ~~~------~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e  319 (335)
T 1rpn_A          248 QDK------ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPA--FFRPAEVDVLLGNPAKAQRVLGWKPRTSLDE  319 (335)
T ss_dssp             SSS------CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGG--GCCSSCCCBCCBCTHHHHHHHCCCCCSCHHH
T ss_pred             cCC------CCEEEEeCCCCccHHHHHHHHHHHhCCCcccccccccc--ccCCCcchhhcCCHHHHHHhcCCCcCCCHHH
Confidence            742      24899999999999999999999999864211111111  1112234557789999999999999 79999


Q ss_pred             HHHHHHhhhc
Q 020880          310 GVKLTLAAEA  319 (320)
Q Consensus       310 ~l~~~i~~~~  319 (320)
                      +|+++++|++
T Consensus       320 ~l~~~~~~~~  329 (335)
T 1rpn_A          320 LIRMMVEADL  329 (335)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999985

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=3.2e-46  Score=322.74  Aligned_cols=294  Identities=25%  Similarity=0.332  Sum_probs=235.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|||||||||||++++++|+++|   ++|+++.|.......   .....+.++.+|++|++++.++++.. ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~vi~~   73 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARG---LEVAVLDNLATGKRE---NVPKGVPFFRVDLRDKEGVERAFREF-RPTHVSHQ   73 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTT---CEEEEECCCSSCCGG---GSCTTCCEECCCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCC---CEEEEEECCCcCchh---hcccCeEEEECCCCCHHHHHHHHHhc-CCCEEEEC
Confidence            479999999999999999999999   889999885433211   12245778899999999998888754 79999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech-hhhcc-c-CCCCcccCCCCCcchHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD-QVYEG-V-KSFYKEEDEIAPVNVYGKSKVAAEK  160 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~-~vy~~-~-~~~~~E~~~~~p~~~Y~~sK~~~e~  160 (320)
                      |+......+..++...+++|+.++. +++++|++.++++||++||. ++||. . ..+++|+++..|.++|+.+|..+|.
T Consensus        74 a~~~~~~~~~~~~~~~~~~N~~g~~-~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  152 (311)
T 2p5y_A           74 AAQASVKVSVEDPVLDFEVNLLGGL-NLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEH  152 (311)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHH-HHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHH-HHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Confidence            9976544445678889999999996 99999999998999999999 99986 3 3478999998899999999999999


Q ss_pred             HHHH----HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEee-----cC--cccCceeHHHHHHHHHHHH
Q 020880          161 FIYE----KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFF-----HD--ECRCPVYVRDVVKIILALT  229 (320)
Q Consensus       161 ~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~i~v~D~a~~~~~~~  229 (320)
                      +++.    ++.+++++||+++|||+........++..++.... .+.++.++     ++  ..++|+|++|+|++++.++
T Consensus       153 ~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~  231 (311)
T 2p5y_A          153 YLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVL-KGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALAL  231 (311)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHH-HTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHH-cCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHH
Confidence            8875    46789999999999998643221223333444433 46666665     54  5789999999999999999


Q ss_pred             hhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHH
Q 020880          230 NRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYK  308 (320)
Q Consensus       230 ~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~  308 (320)
                      +++       +++||+++++.+|++|+++.+.+.+|.+.++.. .+     ..........+|++|+++ |||+| ++++
T Consensus       232 ~~~-------~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~-----~~~~~~~~~~~d~~k~~~-lg~~p~~~~~  297 (311)
T 2p5y_A          232 FSL-------EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQP-AP-----PRPGDLERSVLSPLKLMA-HGWRPKVGFQ  297 (311)
T ss_dssp             HHC-------CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEE-EC-----CCTTCCSBCCBCCHHHHT-TTCCCSSCHH
T ss_pred             hCC-------CCEEEeCCCCCccHHHHHHHHHHHhCCCCCcee-CC-----CCccchhhccCCHHHHHH-CCCCCCCCHH
Confidence            863       349999999999999999999999998754321 11     112233567899999999 99999 8999


Q ss_pred             HHHHHHHhhhcC
Q 020880          309 DGVKLTLAAEAT  320 (320)
Q Consensus       309 ~~l~~~i~~~~~  320 (320)
                      ++|+++++|++.
T Consensus       298 ~~l~~~~~~~~~  309 (311)
T 2p5y_A          298 EGIRLTVDHFRG  309 (311)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHh
Confidence            999999999864

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=2e-46  Score=321.13  Aligned_cols=280  Identities=21%  Similarity=0.319  Sum_probs=234.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      -|+|||||||||||++|+++|+++|   ++|++++|+                  .+|++|++++.++++.. ++|+|||
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~------------------~~Dl~d~~~~~~~~~~~-~~d~vih   69 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKN---VEVIPTDVQ------------------DLDITNVLAVNKFFNEK-KPNVVIN   69 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSS---EEEEEECTT------------------TCCTTCHHHHHHHHHHH-CCSEEEE
T ss_pred             cceEEEECCCChHHHHHHHHHHhCC---CeEEeccCc------------------cCCCCCHHHHHHHHHhc-CCCEEEE
Confidence            3699999999999999999999999   899999886                  37999999998888754 7999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-CCCcccCCCCCcchHHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKF  161 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-~~~~E~~~~~p~~~Y~~sK~~~e~~  161 (320)
                      |||......+..+++..+++|+.++. +++++|.+.++ +|||+||.++|+... .+++|+++..|.+.|+.+|..+|.+
T Consensus        70 ~A~~~~~~~~~~~~~~~~~~nv~~~~-~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~  147 (292)
T 1vl0_A           70 CAAHTAVDKCEEQYDLAYKINAIGPK-NLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENF  147 (292)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHH-HHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CCccCCHHHHhcCHHHHHHHHHHHHH-HHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence            99986554445678899999999996 99999999888 999999999999765 4899999999999999999999999


Q ss_pred             HHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCc
Q 020880          162 IYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL  241 (320)
Q Consensus       162 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  241 (320)
                      ++.++.+++++||+.|||| ..     .+...++. .+..+.++.+.++..++|+|++|+|++++.+++++      .++
T Consensus       148 ~~~~~~~~~~lR~~~v~G~-~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~------~~~  214 (292)
T 1vl0_A          148 VKALNPKYYIVRTAWLYGD-GN-----NFVKTMIN-LGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK------NYG  214 (292)
T ss_dssp             HHHHCSSEEEEEECSEESS-SS-----CHHHHHHH-HHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT------CCE
T ss_pred             HHhhCCCeEEEeeeeeeCC-Cc-----ChHHHHHH-HHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC------CCc
Confidence            9999999999999999999 31     22333333 33457777777888899999999999999999874      245


Q ss_pred             eeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCccCHHHHHHHHHhhhcC
Q 020880          242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAEAT  320 (320)
Q Consensus       242 ~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~i~~~~~  320 (320)
                      +||+++++.+|+.|+++.+.+.+|.+..+. ..+..........+....+|++|++++|||+|.+++++|+++++|++.
T Consensus       215 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~l~~~~~~~~~  292 (292)
T 1vl0_A          215 TFHCTCKGICSWYDFAVEIFRLTGIDVKVT-PCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLLQM  292 (292)
T ss_dssp             EEECCCBSCEEHHHHHHHHHHHHCCCCEEE-EECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHHTC
T ss_pred             EEEecCCCCccHHHHHHHHHHHhCCCCcee-eccccccCcccCCCccccccHHHHHHHcCCCCCCHHHHHHHHHHHhcC
Confidence            999999999999999999999999875432 222221112223445678999999999999999999999999999873

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=2.2e-46  Score=325.10  Aligned_cols=294  Identities=16%  Similarity=0.184  Sum_probs=237.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|+|||||||||||++|+++|+++|   ++|++++|+.+. ..    +  ++.++.+|++|++++.++++.. ++|+|||
T Consensus        12 ~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~-~~----l--~~~~~~~Dl~d~~~~~~~~~~~-~~d~vih   80 (321)
T 2pk3_A           12 SMRALITGVAGFVGKYLANHLTEQN---VEVFGTSRNNEA-KL----P--NVEMISLDIMDSQRVKKVISDI-KPDYIFH   80 (321)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCTTC-CC----T--TEEEEECCTTCHHHHHHHHHHH-CCSEEEE
T ss_pred             cceEEEECCCChHHHHHHHHHHHCC---CEEEEEecCCcc-cc----c--eeeEEECCCCCHHHHHHHHHhc-CCCEEEE
Confidence            6899999999999999999999999   899999998654 21    1  5778999999999999888742 5999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeechhhhccc---CCCCcccCCCCCcchHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTDQVYEGV---KSFYKEEDEIAPVNVYGKSKVAA  158 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~~vy~~~---~~~~~E~~~~~p~~~Y~~sK~~~  158 (320)
                      |||......+..+++..+++|+.++. +++++|++. ++++|||+||.++|+..   ..+++|+++..|.+.|+.+|..+
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~Nv~g~~-~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~  159 (321)
T 2pk3_A           81 LAAKSSVKDSWLNKKGTFSTNVFGTL-HVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASV  159 (321)
T ss_dssp             CCSCCCHHHHTTCHHHHHHHHHHHHH-HHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHH
T ss_pred             cCcccchhhhhhcHHHHHHHHHHHHH-HHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHH
Confidence            99987655555678899999999996 999999775 57899999999999964   45899999999999999999999


Q ss_pred             HHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHh--cC--CceEeecC--cccCceeHHHHHHHHHHH
Q 020880          159 EKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLS--KG--EKVEFFHD--ECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       159 e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~--~~~~~i~v~D~a~~~~~~  228 (320)
                      |.+++.+    +.+++++||+++|||+...   ..+...++.....  .+  .++...++  ..++|+|++|+|++++.+
T Consensus       160 E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~  236 (321)
T 2pk3_A          160 GMLARQYVKAYGMDIIHTRTFNHIGPGQSL---GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLL  236 (321)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEECTTCCT---TSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEEeCcccCcCCCC---CchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHH
Confidence            9988876    6789999999999998642   2223334433332  14  45555554  578999999999999999


Q ss_pred             HhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCH
Q 020880          229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTY  307 (320)
Q Consensus       229 ~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~  307 (320)
                      ++++.     .+++||+++++.+|+.|+++.+.+.+|.+.++. ..+..   ..........+|++|++++|||+| +++
T Consensus       237 ~~~~~-----~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-~~p~~---~~~~~~~~~~~d~~k~~~~lG~~p~~~~  307 (321)
T 2pk3_A          237 SQYGK-----TGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTE-LNPLQ---LRPSEVPTLIGSNKRLKDSTGWKPRIPL  307 (321)
T ss_dssp             HHHCC-----TTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEE-ECGGG---CCSSCCSBCCBCCHHHHHHHCCCCCSCH
T ss_pred             HhCCC-----CCCeEEeCCCCCeeHHHHHHHHHHHhCCCCcee-ecccc---CCCcccchhccCHHHHHHHcCCCcCCCH
Confidence            98752     245999999999999999999999999865433 22210   112234567899999999999999 699


Q ss_pred             HHHHHHHHhhhcC
Q 020880          308 KDGVKLTLAAEAT  320 (320)
Q Consensus       308 ~~~l~~~i~~~~~  320 (320)
                      +++|+++++|+++
T Consensus       308 ~e~l~~~~~~~~~  320 (321)
T 2pk3_A          308 EKSLFEILQSYRQ  320 (321)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999999864

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=4.6e-46  Score=322.32  Aligned_cols=295  Identities=28%  Similarity=0.448  Sum_probs=210.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|+|||||||||||++|+++|+++|   ++|++++|+.+.        + +  ++.+|++|++++.++++.. ++|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~--------~-~--~~~~Dl~d~~~~~~~~~~~-~~d~vih   66 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNN---WHAVGCGFRRAR--------P-K--FEQVNLLDSNAVHHIIHDF-QPHVIVH   66 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEC-----------------------------CHHHHHHH-CCSEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCC---CeEEEEccCCCC--------C-C--eEEecCCCHHHHHHHHHhh-CCCEEEE
Confidence            4789999999999999999999999   899999987543        1 1  5889999999999988854 6999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI  162 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  162 (320)
                      |||......+..+++..+++|+.++. +++++|.+.++ +|||+||.++|+....+++|+++..|.+.|+.+|..+|+++
T Consensus        67 ~A~~~~~~~~~~~~~~~~~~n~~~~~-~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  144 (315)
T 2ydy_A           67 CAAERRPDVVENQPDAASQLNVDASG-NLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAV  144 (315)
T ss_dssp             CC-------------------CHHHH-HHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCcccChhhhhcCHHHHHHHHHHHHH-HHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            99987655456678889999999996 99999999887 99999999999986668999999999999999999999999


Q ss_pred             HHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHh-cCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCc
Q 020880          163 YEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLS-KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL  241 (320)
Q Consensus       163 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  241 (320)
                      +.++.+++++||+.|||+.....  ..++..++. .+. .+..+.+.++..++|+|++|+|++++.++.++... ...++
T Consensus       145 ~~~~~~~~~lR~~~v~G~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~-~~~~~  220 (315)
T 2ydy_A          145 LENNLGAAVLRIPILYGEVEKLE--ESAVTVMFD-KVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLD-PSIKG  220 (315)
T ss_dssp             HHHCTTCEEEEECSEECSCSSGG--GSTTGGGHH-HHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTC-TTCCE
T ss_pred             HHhCCCeEEEeeeeeeCCCCccc--ccHHHHHHH-HHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccc-cCCCC
Confidence            99999999999999999986411  012222232 333 56666677778899999999999999998874110 12345


Q ss_pred             eeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHHHhhhcC
Q 020880          242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLAAEAT  320 (320)
Q Consensus       242 ~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~~  320 (320)
                      +||+++++.+|+.|+++.+.+.+|.+.+.+.+.+. .......++....+|++|++++ ||+| ++++++|+++++|+++
T Consensus       221 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~~l~~~~~~~~~  298 (315)
T 2ydy_A          221 TFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITD-SPVLGAQRPRNAQLDCSKLETL-GIGQRTPFRIGIKESLWPFLI  298 (315)
T ss_dssp             EEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECS-CCCSSSCCCSBCCBCCHHHHHT-TCCCCCCHHHHHHHHHGGGCC
T ss_pred             eEEEcCCCcccHHHHHHHHHHHhCCChhheecccc-ccccccCCCcccccchHHHHhc-CCCCCCCHHHHHHHHHHHHcc
Confidence            99999999999999999999999987642222221 0001122445678999999998 9998 8999999999999863

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=1.3e-45  Score=329.52  Aligned_cols=308  Identities=19%  Similarity=0.204  Sum_probs=237.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHh-hccCCCceEEEecCCCCCh---------hhhh---hhC-----CCc---ceEEEeeC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLS-EIEGKPYDVAATHHSTPLP---------QLLL---DAL-----PHS---FVFFDVDL   61 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~-~~g~~v~~v~~~~r~~~~~---------~~~~---~~~-----~~~---~~~~~~Dl   61 (320)
                      +|+|||||||||||++|+++|+ ++|   ++|++++|+....         ..+.   ...     ...   +.++.+|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl   78 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTN---HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDV   78 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCC---CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCC---CEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCC
Confidence            5699999999999999999999 999   8999999875542         2221   111     124   78899999


Q ss_pred             CCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-----
Q 020880           62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-----  136 (320)
Q Consensus        62 ~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-----  136 (320)
                      +|++++.++++.++++|+|||+|+......+..+++..+++|+.++. +++++|++.++++|||+||.++|+...     
T Consensus        79 ~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~-~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~  157 (397)
T 1gy8_A           79 RNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGIL-RLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVS  157 (397)
T ss_dssp             TCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHH-HHHHHHHHTTCCEEEEEEEGGGTBSCCC----
T ss_pred             CCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHH-HHHHHHHHhCCCEEEEECCHHHhCCCCccccc
Confidence            99999998888653499999999987554345577889999999996 999999999999999999999998654     


Q ss_pred             ---CCCcccCCCCCcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCC------CCCCChHHHH----HHHH
Q 020880          137 ---SFYKEEDEIAPVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISP------VPKSLPIQWI----DSVL  199 (320)
Q Consensus       137 ---~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~------~~~~~~~~~~----~~~~  199 (320)
                         .+++|+++..|.+.|+.+|..+|.+++.+    +.+++++||++||||+....      ....++..++    ....
T Consensus       158 ~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  237 (397)
T 1gy8_A          158 TNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIA  237 (397)
T ss_dssp             -CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHS
T ss_pred             ccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHH
Confidence               48899999999999999999999988774    67899999999999975311      1122332222    1332


Q ss_pred             hcC-----------CceEeec--------CcccCceeHHHHHHHHHHHHhhhhccc-cccC---ceeEecCCCCcCHHHH
Q 020880          200 SKG-----------EKVEFFH--------DECRCPVYVRDVVKIILALTNRWLSED-KQMQ---LLLNVGGPDRVSRVQM  256 (320)
Q Consensus       200 ~~~-----------~~~~~~~--------~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~---~~~n~~~~~~~s~~e~  256 (320)
                      ...           .++.++|        ++.++|||++|+|++++.+++++...+ ...+   ++||+++++.+|+.|+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~  317 (397)
T 1gy8_A          238 PDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREV  317 (397)
T ss_dssp             CC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHH
T ss_pred             hcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHH
Confidence            222           2466654        357899999999999999998753221 0012   5999999999999999


Q ss_pred             HHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-c-CHHHHHHHHHhhhcC
Q 020880          257 AEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-V-TYKDGVKLTLAAEAT  320 (320)
Q Consensus       257 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~-~~~~~l~~~i~~~~~  320 (320)
                      ++.+.+.+|.+.++. ..+     ..........+|++|++++|||+| + +++++|+++++|++.
T Consensus       318 ~~~i~~~~g~~~~~~-~~~-----~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~  377 (397)
T 1gy8_A          318 IEVARKTTGHPIPVR-ECG-----RREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRT  377 (397)
T ss_dssp             HHHHHHHHCCCCCEE-EEC-----CCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhCCCCCee-eCC-----CCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHh
Confidence            999999999865432 111     112234567899999999999999 6 999999999999863

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1.5e-46  Score=329.62  Aligned_cols=285  Identities=16%  Similarity=0.174  Sum_probs=232.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|+|||||||||||++|+++|+++|   ++|++++|+++.         .++.++.+|++|++++.++++   ++|+|||
T Consensus        19 ~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~---------~~~~~~~~Dl~d~~~~~~~~~---~~d~vih   83 (347)
T 4id9_A           19 SHMILVTGSAGRVGRAVVAALRTQG---RTVRGFDLRPSG---------TGGEEVVGSLEDGQALSDAIM---GVSAVLH   83 (347)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTT---CCEEEEESSCCS---------SCCSEEESCTTCHHHHHHHHT---TCSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCC---CEEEEEeCCCCC---------CCccEEecCcCCHHHHHHHHh---CCCEEEE
Confidence            6899999999999999999999999   899999998654         357789999999999988887   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcc---cCCCCcccCCCCCcchHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG---VKSFYKEEDEIAPVNVYGKSKVAAE  159 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~---~~~~~~E~~~~~p~~~Y~~sK~~~e  159 (320)
                      +|+.......  ..+..+++|+.++. +++++|++.++++|||+||.++||.   ...+++|+++..|.+.|+.+|..+|
T Consensus        84 ~A~~~~~~~~--~~~~~~~~nv~~~~-~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E  160 (347)
T 4id9_A           84 LGAFMSWAPA--DRDRMFAVNVEGTR-RLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGE  160 (347)
T ss_dssp             CCCCCCSSGG--GHHHHHHHHTHHHH-HHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             CCcccCcchh--hHHHHHHHHHHHHH-HHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Confidence            9998654332  34788999999996 9999999999999999999999997   3348999999999999999999999


Q ss_pred             HHHHHH----cCCeeEEeecccc-------------cCCCCCCC--------CCCChHHHHHHHHhcCCceEeec--Ccc
Q 020880          160 KFIYEK----CSNFAILRSSIIY-------------GPQTISPV--------PKSLPIQWIDSVLSKGEKVEFFH--DEC  212 (320)
Q Consensus       160 ~~~~~~----~~~~~ilR~~~v~-------------G~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~--~~~  212 (320)
                      ++++.+    +.+++++||+.+|             ||+.....        ...++..++. ....+.++.+.+  +..
T Consensus       161 ~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~  239 (347)
T 4id9_A          161 ELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQ-SRDIGEPSHILARNENG  239 (347)
T ss_dssp             HHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHH-HHCCSSCCEEEEECTTC
T ss_pred             HHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHH-HHHcCCCeEEeCCCCcc
Confidence            988764    5688999999999             76532100        0122333333 344677766665  457


Q ss_pred             cCc----eeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCc
Q 020880          213 RCP----VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPAD  288 (320)
Q Consensus       213 ~~~----i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (320)
                      ++|    +|++|+|++++.+++++..    .+++||+++++.+|+.|+++.+.+.+|.+.+.. ..+.        ....
T Consensus       240 ~~~~~~~i~v~Dva~ai~~~~~~~~~----~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-~~p~--------~~~~  306 (347)
T 4id9_A          240 RPFRMHITDTRDMVAGILLALDHPEA----AGGTFNLGADEPADFAALLPKIAALTGLPIVTV-DFPG--------DGVY  306 (347)
T ss_dssp             CBCEECEEEHHHHHHHHHHHHHCGGG----TTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEE-ECSS--------CCCB
T ss_pred             cCCccCcEeHHHHHHHHHHHhcCccc----CCCeEEECCCCcccHHHHHHHHHHHhCCCCcee-eCCC--------cccc
Confidence            899    9999999999999998632    245999999999999999999999999875543 1111        1226


Q ss_pred             cccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          289 ISMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       289 ~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      ..+|++|++++|||+| ++++++|+++++|++
T Consensus       307 ~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~  338 (347)
T 4id9_A          307 YHTSNERIRNTLGFEAEWTMDRMLEEAATARR  338 (347)
T ss_dssp             CCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence            7899999999999999 799999999999985

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-45  Score=323.98  Aligned_cols=303  Identities=19%  Similarity=0.274  Sum_probs=234.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-CChhhhhhhC--CCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLDAL--PHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      ||+|||||||||||++|+++|+++|   ++|++++|.. .........+  ..+++++.+|++|++++.++++.. ++|+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~   76 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQG---IDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-MPDS   76 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-CCSE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCC---CEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-CCCE
Confidence            5789999999999999999999999   8999998853 2221111111  235788999999999999988843 5999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeechhhhcccCC-----------------CCcc
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTDQVYEGVKS-----------------FYKE  141 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~-----------------~~~E  141 (320)
                      |||+||......+..+++..+++|+.++. +++++|.+.+++ +|||+||.++|+....                 +++|
T Consensus        77 vih~A~~~~~~~~~~~~~~~~~~nv~~~~-~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e  155 (347)
T 1orr_A           77 CFHLAGQVAMTTSIDNPCMDFEINVGGTL-NLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDE  155 (347)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHHHHHH-HHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCT
T ss_pred             EEECCcccChhhhhhCHHHHHHHHHHHHH-HHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccc
Confidence            99999986554445578889999999996 999999998885 9999999999986432                 2677


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCC----ceEeecC--c
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGE----KVEFFHD--E  211 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~  211 (320)
                      +++..|.+.|+.+|..+|++++.+    +.+++++||+.||||..........+..++........    ++..+++  +
T Consensus       156 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  235 (347)
T 1orr_A          156 STQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQ  235 (347)
T ss_dssp             TSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCC
T ss_pred             cCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcc
Confidence            778888999999999999988875    67899999999999986432222233444444443221    5666554  6


Q ss_pred             ccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC--CcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCcc
Q 020880          212 CRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD--RVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI  289 (320)
Q Consensus       212 ~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~--~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (320)
                      .++|+|++|+|++++.++++..   ...+++||++++.  .+|+.|+++.+.+.+|.+.++. ..+     .........
T Consensus       236 ~~~~i~v~Dva~a~~~~~~~~~---~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~-----~~~~~~~~~  306 (347)
T 1orr_A          236 VRDVLHAEDMISLYFTALANVS---KIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFT-NLP-----VRESDQRVF  306 (347)
T ss_dssp             EEECEEHHHHHHHHHHHHHTHH---HHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEE-EEC-----CCSSCCSEE
T ss_pred             eEeeEEHHHHHHHHHHHHhccc---cCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCce-eCC-----CCCCCccee
Confidence            8899999999999999997521   1124499999886  4999999999999999875543 122     112234457


Q ss_pred             ccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          290 SMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       290 ~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      .+|++|++++|||+| ++++++|+++++|++
T Consensus       307 ~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~  337 (347)
T 1orr_A          307 VADIKKITNAIDWSPKVSAKDGVQKMYDWTS  337 (347)
T ss_dssp             CBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             ecCHHHHHHHHCCCccCCHHHHHHHHHHHHH
Confidence            899999999999999 899999999999985

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=3.3e-45  Score=319.96  Aligned_cols=302  Identities=20%  Similarity=0.196  Sum_probs=230.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh----hhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP----QLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |+|||||||||||++++++|+++|   ++|+++.|.....    ..+....+..+.++.+|++|++++.++++.. ++|+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~D~   76 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-AIDT   76 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-TCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-CCCE
Confidence            479999999999999999999999   7888887643221    1111111345778999999999998888754 7999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-CCCcccCCCCC-cchHHHHHHH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-SFYKEEDEIAP-VNVYGKSKVA  157 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-~~~~E~~~~~p-~~~Y~~sK~~  157 (320)
                      ||||||......+..++...+++|+.++. ++++++++.++++|||+||.++|+... .+++|+++..| .+.|+.+|..
T Consensus        77 vih~A~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~  155 (338)
T 1udb_A           77 VIHFAGLKAVGESVQKPLEYYDNNVNGTL-RLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLM  155 (338)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHHHHHH-HHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHH
T ss_pred             EEECCccCccccchhcHHHHHHHHHHHHH-HHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHH
Confidence            99999976543344567788999999996 999999998888999999999998654 37889888765 7899999999


Q ss_pred             HHHHHHHH-----cCCeeEEeecccccCCCCCC---C----CCCChHHHHHHHHh-cCCceEeec--------CcccCce
Q 020880          158 AEKFIYEK-----CSNFAILRSSIIYGPQTISP---V----PKSLPIQWIDSVLS-KGEKVEFFH--------DECRCPV  216 (320)
Q Consensus       158 ~e~~~~~~-----~~~~~ilR~~~v~G~~~~~~---~----~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~i  216 (320)
                      +|.+++.+     +.+++++||+++||++....   .    ...+. ..+..... .+..+.+++        ++.++||
T Consensus       156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i  234 (338)
T 1udb_A          156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLM-PYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYI  234 (338)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHH-HHHHHHHHTSSSCEEEECSCSSSSSSSCEECEE
T ss_pred             HHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHH-HHHHHHHHhcCCCcEEecCcccCCCCceeeeeE
Confidence            99988774     35789999999999853211   0    12223 23333332 445555543        3578999


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHH
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL  296 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  296 (320)
                      |++|+|++++.++++...  ...+++||+++++.+|+.|+++.+.+.+|.+.+... .+     ..........+|++|+
T Consensus       235 ~v~Dva~a~~~~l~~~~~--~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~-----~~~~~~~~~~~d~~k~  306 (338)
T 1udb_A          235 HVMDLADGHVVAMEKLAN--KPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHF-AP-----RREGDLPAYWADASKA  306 (338)
T ss_dssp             EHHHHHHHHHHHHHHHTT--CCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEE-EC-----CCTTCCSBCCBCCHHH
T ss_pred             EHHHHHHHHHHHHhhhhc--cCCCcEEEecCCCceeHHHHHHHHHHHhCCCCccee-CC-----CCCCchhhhhcCHHHH
Confidence            999999999999976421  111259999999999999999999999997654321 11     1122334577899999


Q ss_pred             HhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          297 VQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       297 ~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      +++|||+| ++++++|+++++|++
T Consensus       307 ~~~lG~~p~~~l~~~l~~~~~w~~  330 (338)
T 1udb_A          307 DRELNWRVTRTLDEMAQDTWHWQS  330 (338)
T ss_dssp             HHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred             HHHcCCCcCCCHHHHHHHHHHHHH
Confidence            99999999 899999999999985

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=3.3e-45  Score=324.68  Aligned_cols=295  Identities=20%  Similarity=0.212  Sum_probs=235.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      +||+|||||||||||++|+++|+++|   ++|++++|+.+......   ..+++++.+|++|++++.++++   ++|+||
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~---~~~v~~~~~Dl~d~~~~~~~~~---~~d~Vi   98 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEG---HYVIASDWKKNEHMTED---MFCDEFHLVDLRVMENCLKVTE---GVDHVF   98 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCSSSCGG---GTCSEEEECCTTSHHHHHHHHT---TCSEEE
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCC---CeEEEEECCCccchhhc---cCCceEEECCCCCHHHHHHHhC---CCCEEE
Confidence            36899999999999999999999999   89999999876543221   2367889999999999888886   899999


Q ss_pred             ECCCccCccc-cccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC------CCCcccC--CCCCcchHH
Q 020880           82 NCAALSVPRV-CENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK------SFYKEED--EIAPVNVYG  152 (320)
Q Consensus        82 h~a~~~~~~~-~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~------~~~~E~~--~~~p~~~Y~  152 (320)
                      |+|+...... +..+++..+++|+.++. +++++|++.++++|||+||.++|+...      .+++|++  +..|.+.|+
T Consensus        99 h~A~~~~~~~~~~~~~~~~~~~Nv~g~~-~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~  177 (379)
T 2c5a_A           99 NLAADMGGMGFIQSNHSVIMYNNTMISF-NMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFG  177 (379)
T ss_dssp             ECCCCCCCHHHHTTCHHHHHHHHHHHHH-HHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHH
T ss_pred             ECceecCcccccccCHHHHHHHHHHHHH-HHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhH
Confidence            9999764422 24578889999999996 999999999999999999999998643      3578887  677889999


Q ss_pred             HHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCC-CChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHH
Q 020880          153 KSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPK-SLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKII  225 (320)
Q Consensus       153 ~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~  225 (320)
                      .+|..+|.+++.+    +.+++++||+.+|||+....... .++..++......+..+.++++  ..++|+|++|+|+++
T Consensus       178 ~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai  257 (379)
T 2c5a_A          178 LEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV  257 (379)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHH
Confidence            9999999988654    67899999999999986432111 2344455554433333666654  588999999999999


Q ss_pred             HHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-
Q 020880          226 LALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-  304 (320)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-  304 (320)
                      +.+++++      .+++||+++++.+|+.|+++.+.+.+|.+.++. ..+..      .......+|++|++++|||+| 
T Consensus       258 ~~~l~~~------~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-~~p~~------~~~~~~~~d~~k~~~~lG~~p~  324 (379)
T 2c5a_A          258 LRLTKSD------FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIH-HIPGP------EGVRGRNSDNNLIKEKLGWAPN  324 (379)
T ss_dssp             HHHHHSS------CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEE-EECCC------CCCSBCEECCHHHHHHHSCCCC
T ss_pred             HHHhhcc------CCCeEEeCCCCccCHHHHHHHHHHHhCCCCcee-eCCCC------CCcccccCCHHHHHHHhCCCCC
Confidence            9999864      234899999999999999999999999875543 22211      123456789999999999999 


Q ss_pred             cCHHHHHHHHHhhhc
Q 020880          305 VTYKDGVKLTLAAEA  319 (320)
Q Consensus       305 ~~~~~~l~~~i~~~~  319 (320)
                      ++++++|+++++|++
T Consensus       325 ~~l~e~l~~~~~~~~  339 (379)
T 2c5a_A          325 MRLKEGLRITYFWIK  339 (379)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHH
Confidence            799999999999986

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=1.5e-45  Score=319.90  Aligned_cols=290  Identities=17%  Similarity=0.190  Sum_probs=229.5

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |++|+|||||||||||++|+++|+++|   ++|+++.|+.                 .+|++|++++.++++.. ++|+|
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g---~~v~~~~r~~-----------------~~D~~d~~~~~~~~~~~-~~d~v   59 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRG---DVELVLRTRD-----------------ELNLLDSRAVHDFFASE-RIDQV   59 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCT---TEEEECCCTT-----------------TCCTTCHHHHHHHHHHH-CCSEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC---CeEEEEecCc-----------------cCCccCHHHHHHHHHhc-CCCEE
Confidence            778899999999999999999999999   7888887762                 36999999988888755 89999


Q ss_pred             EECCCccCc-cccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-CCCcccC----CCCCc-chHHH
Q 020880           81 VNCAALSVP-RVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-SFYKEED----EIAPV-NVYGK  153 (320)
Q Consensus        81 ih~a~~~~~-~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-~~~~E~~----~~~p~-~~Y~~  153 (320)
                      ||+|+.... ..+..+++..+++|+.++. +++++|++.++++|||+||.++|+... .+++|++    +..|. +.|+.
T Consensus        60 ih~a~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~  138 (321)
T 1e6u_A           60 YLAAAKVGGIVANNTYPADFIYQNMMIES-NIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAI  138 (321)
T ss_dssp             EECCCCCCCHHHHHHCHHHHHHHHHHHHH-HHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHH
T ss_pred             EEcCeecCCcchhhhCHHHHHHHHHHHHH-HHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHH
Confidence            999997642 2234577888999999995 999999999999999999999999654 4788887    56664 59999


Q ss_pred             HHHHHHHHHHHH----cCCeeEEeecccccCCCCCCC-CCCChHHHHHHHHh---cC-CceEeec--CcccCceeHHHHH
Q 020880          154 SKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPV-PKSLPIQWIDSVLS---KG-EKVEFFH--DECRCPVYVRDVV  222 (320)
Q Consensus       154 sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~---~~-~~~~~~~--~~~~~~i~v~D~a  222 (320)
                      +|..+|++++.+    +.+++++||+.+|||+..... ...++..++.....   .| .++.+++  +..++|||++|+|
T Consensus       139 sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva  218 (321)
T 1e6u_A          139 AKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMA  218 (321)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHH
Confidence            999999988874    678999999999999864221 12334444444432   23 5666665  4689999999999


Q ss_pred             HHHHHHHhhhhcc----ccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHh
Q 020880          223 KIILALTNRWLSE----DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ  298 (320)
Q Consensus       223 ~~~~~~~~~~~~~----~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  298 (320)
                      ++++.+++++...    ....+++||+++++.+|+.|+++.+.+.+|.+..+.. .+     ..........+|++|+++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~-----~~~~~~~~~~~d~~k~~~  292 (321)
T 1e6u_A          219 AASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVF-DA-----SKPDGTPRKLLDVTRLHQ  292 (321)
T ss_dssp             HHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEE-ET-----TSCCCCSBCCBCCHHHHH
T ss_pred             HHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEe-CC-----CCCCCcccccCCHHHHHh
Confidence            9999999875431    0012359999999999999999999999998754321 11     111234567899999999


Q ss_pred             hcCCCc-cCHHHHHHHHHhhhc
Q 020880          299 TLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       299 ~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                       |||+| ++++++|+++++|++
T Consensus       293 -lG~~p~~~~~~~l~~~~~~~~  313 (321)
T 1e6u_A          293 -LGWYHEISLEAGLASTYQWFL  313 (321)
T ss_dssp             -TTCCCCCCHHHHHHHHHHHHH
T ss_pred             -cCCccCCcHHHHHHHHHHHHH
Confidence             99999 899999999999985

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=6.8e-45  Score=317.88  Aligned_cols=298  Identities=20%  Similarity=0.251  Sum_probs=234.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhc---cCCCceEEEecCCCC--Chhhhhhh-CCCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEI---EGKPYDVAATHHSTP--LPQLLLDA-LPHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~---g~~v~~v~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      |+|||||||||||++|+++|+++   |...++|++++|+..  ....+... ...+++++.+|++|++++.+++.   ++
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~   77 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR---GV   77 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT---TC
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhc---CC
Confidence            47999999999999999999996   510047888888642  12222111 12468889999999998888774   89


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhccc-CCCCcccCCCCCcchHHHHHH
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKV  156 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~-~~~~~E~~~~~p~~~Y~~sK~  156 (320)
                      |+|||||+......+..+++..+++|+.++. +++++|.+.++++|||+||.++||.. ..+++|+++..|.+.|+.+|.
T Consensus        78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~-~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~  156 (337)
T 1r6d_A           78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQ-TLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKA  156 (337)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHH-HHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHH
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHH-HHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHH
Confidence            9999999986554445678889999999996 99999999999999999999999865 347899999999999999999


Q ss_pred             HHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHh
Q 020880          157 AAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTN  230 (320)
Q Consensus       157 ~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~  230 (320)
                      .+|.+++.+    +.+++++||+.+|||....   ..++..++.... .+.++.++++  ..++|+|++|+|++++.+++
T Consensus       157 ~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~  232 (337)
T 1r6d_A          157 GSDLVARAYHRTYGLDVRITRCCNNYGPYQHP---EKLIPLFVTNLL-DGGTLPLYGDGANVREWVHTDDHCRGIALVLA  232 (337)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEEECTTCCT---TSHHHHHHHHHH-TTCCEEEETTSCCEEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC---CChHHHHHHHHh-cCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHh
Confidence            999988764    6789999999999998631   233344444433 5667776654  57899999999999999998


Q ss_pred             hhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHH
Q 020880          231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKD  309 (320)
Q Consensus       231 ~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~  309 (320)
                      ++.     .+++||+++++.+|+.|+++.+.+.+|.+.+.+...+     ........+.+|++|++++|||+| +++++
T Consensus       233 ~~~-----~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e  302 (337)
T 1r6d_A          233 GGR-----AGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVA-----DRKGHDLRYSLDGGKIERELGYRPQVSFAD  302 (337)
T ss_dssp             HCC-----TTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEEC-----CCTTCCCBCCBCCHHHHHHHCCCCCSCHHH
T ss_pred             CCC-----CCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecC-----CCCCCcceeecCHHHHHHHcCCCCCCCHHH
Confidence            642     2459999999999999999999999998653221111     111122346789999999999999 89999


Q ss_pred             HHHHHHhhhc
Q 020880          310 GVKLTLAAEA  319 (320)
Q Consensus       310 ~l~~~i~~~~  319 (320)
                      +|+++++|++
T Consensus       303 ~l~~~~~~~~  312 (337)
T 1r6d_A          303 GLARTVRWYR  312 (337)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999975

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=1.4e-45  Score=326.88  Aligned_cols=298  Identities=17%  Similarity=0.177  Sum_probs=228.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .||+|||||||||||++|+++|+++|.  ++|++++|+.+....... ...+++++.+|++|++++.++++   ++|+||
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~l~-~~~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi  104 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGV--NQVHVVDNLLSAEKINVP-DHPAVRFSETSITDDALLASLQD---EYDYVF  104 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--SEEEEECCCTTCCGGGSC-CCTTEEEECSCTTCHHHHHHCCS---CCSEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC--ceEEEEECCCCCchhhcc-CCCceEEEECCCCCHHHHHHHhh---CCCEEE
Confidence            367999999999999999999999983  578889998654322111 13468889999999988877766   899999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeechhhhcccCC-CCc--ccC---CC-CCcchHHH
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTDQVYEGVKS-FYK--EED---EI-APVNVYGK  153 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~~vy~~~~~-~~~--E~~---~~-~p~~~Y~~  153 (320)
                      |||+......+..+++..+++|+.++. +++++|++. ++++|||+||.++||.... +++  |++   +. .|.++|+.
T Consensus       105 h~A~~~~~~~~~~~~~~~~~~nv~~~~-~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~  183 (377)
T 2q1s_A          105 HLATYHGNQSSIHDPLADHENNTLTTL-KLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSM  183 (377)
T ss_dssp             ECCCCSCHHHHHHCHHHHHHHHTHHHH-HHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHH
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHH-HHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHH
Confidence            999987554445678889999999996 999999998 8999999999999997655 778  888   66 78899999


Q ss_pred             HHHHHHHHHHHH----cCCeeEEeecccccCCC---------CCCC-CCCChHHHHHHHHhcCCceEeecC--cccCcee
Q 020880          154 SKVAAEKFIYEK----CSNFAILRSSIIYGPQT---------ISPV-PKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVY  217 (320)
Q Consensus       154 sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~  217 (320)
                      +|..+|.+++.+    +.+++++||+.||||..         .... ...++..++.. +..+.++.++++  ..++|||
T Consensus       184 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~g~g~~~~~~i~  262 (377)
T 2q1s_A          184 SKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYK-ALKGMPLPLENGGVATRDFIF  262 (377)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHH-HHTTCCCCCSGGGCCEECCEE
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHH-HHcCCCeEEeCCCCeEEeeEE
Confidence            999999988765    67999999999999976         1100 02233344444 446776666654  6899999


Q ss_pred             HHHHHHH-HHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCC-ccccChHH
Q 020880          218 VRDVVKI-ILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPA-DISMDITK  295 (320)
Q Consensus       218 v~D~a~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~k  295 (320)
                      ++|+|++ ++.+++++.     .+ +||+++++.+|+.|+++.+.+.+|.+..+. ..+.     ...... ...+|++|
T Consensus       263 v~Dva~a~i~~~~~~~~-----~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-~~p~-----~~~~~~~~~~~d~~k  330 (377)
T 2q1s_A          263 VEDVANGLIACAADGTP-----GG-VYNIASGKETSIADLATKINEITGNNTELD-RLPK-----RPWDNSGKRFGSPEK  330 (377)
T ss_dssp             HHHHHHHHHHHHHHCCT-----TE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCC-CCCC-----CGGGCC-CCCCCCHH
T ss_pred             HHHHHHHHHHHHHhcCC-----CC-eEEecCCCceeHHHHHHHHHHHhCCCCCce-eCCC-----CccccccccccCHHH
Confidence            9999999 999998742     24 999999999999999999999999875432 1221     111233 67899999


Q ss_pred             HHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          296 LVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       296 ~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      ++++|||+| ++++++|+++++|++
T Consensus       331 ~~~~lG~~p~~~l~e~l~~~~~~~~  355 (377)
T 2q1s_A          331 ARRELGFSADVSIDDGLRKTIEWTK  355 (377)
T ss_dssp             HHHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCHHHHHHHHHHHHH
Confidence            999999999 899999999999975

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=4.7e-45  Score=319.82  Aligned_cols=307  Identities=18%  Similarity=0.117  Sum_probs=235.4

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh-hhhhhC--CCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-LLLDAL--PHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~-~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      |++|+|||||||||||++++++|+++|   ++|++++|+++... ......  ..+++++.+|++|++++.++++.. ++
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~   76 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKG---YEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-QP   76 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-CC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-CC
Confidence            678999999999999999999999999   89999999876532 111222  235788899999999999988865 78


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccC-ceEEEeechhhhcccCC-CCcccCCCCCcchHHHHH
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE-NLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSK  155 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK  155 (320)
                      |+||||||......+..+++..+++|+.++. +++++|.+.++ ++|||+||.++||.... +++|+++..|.++|+.+|
T Consensus        77 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~-~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK  155 (345)
T 2z1m_A           77 DEVYNLAAQSFVGVSFEQPILTAEVDAIGVL-RILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAK  155 (345)
T ss_dssp             SEEEECCCCCCHHHHTTSHHHHHHHHTHHHH-HHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             CEEEECCCCcchhhhhhCHHHHHHHHHHHHH-HHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHH
Confidence            9999999987554455678899999999996 99999998886 79999999999997654 789999999999999999


Q ss_pred             HHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCC-ceEeec--CcccCceeHHHHHHHHHHH
Q 020880          156 VAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGE-KVEFFH--DECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       156 ~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~i~v~D~a~~~~~~  228 (320)
                      ..+|.+++.+    +.+++++|++++|||+.........+..++.... .+. .....+  +..++|+|++|+|++++.+
T Consensus       156 ~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~  234 (345)
T 2z1m_A          156 LFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIK-YGLQDKLVLGNLNAKRDWGYAPEYVEAMWLM  234 (345)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHH-TTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHH-cCCCCeeeeCCCCceeeeEEHHHHHHHHHHH
Confidence            9999988765    5677899999999998632110011112232323 343 333344  3578999999999999999


Q ss_pred             HhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccc-cCCcc-----------cc---CCCCCCCCccccCh
Q 020880          229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIK-PVSAS-----------SV---DRGVQSPADISMDI  293 (320)
Q Consensus       229 ~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~-~~~~~-----------~~---~~~~~~~~~~~~d~  293 (320)
                      ++++.      .++||+++++.+|+.|+++.+.+.+|.+.++.. ..|..           ..   ...........+|+
T Consensus       235 ~~~~~------~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  308 (345)
T 2z1m_A          235 MQQPE------PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNP  308 (345)
T ss_dssp             HTSSS------CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCC
T ss_pred             HhCCC------CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCH
Confidence            98642      248999999999999999999999998743210 01100           00   01122334567899


Q ss_pred             HHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          294 TKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       294 ~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      +|++++|||+| ++++++|+++++|++
T Consensus       309 ~k~~~~lG~~p~~~~~~~l~~~~~~~~  335 (345)
T 2z1m_A          309 EKAMKKLGWKPRTTFDELVEIMMEADL  335 (345)
T ss_dssp             HHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCcccCCHHHHHHHHHHHHH
Confidence            99999999999 899999999999975

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.3e-45  Score=323.72  Aligned_cols=305  Identities=16%  Similarity=0.067  Sum_probs=233.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-----hhhhhhh----CCCcceEEEeeCCCcccHHHHHHHh
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-----PQLLLDA----LPHSFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-----~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      |+|||||||||||++|+++|+++|   ++|++++|+.+.     ...+...    ...++.++.+|++|++++.++++..
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKG---YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc
Confidence            789999999999999999999999   899999998653     1111110    1246788999999999999988865


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccC---ceEEEeechhhhcccCC-CCcccCCCCCcch
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE---NLLIHLSTDQVYEGVKS-FYKEEDEIAPVNV  150 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~  150 (320)
                       ++|+||||||......+..+++..+++|+.++. +++++|.+.++   ++|||+||.++|+.... +++|+++..|.+.
T Consensus       102 -~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~-~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~  179 (375)
T 1t2a_A          102 -KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTL-RLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSP  179 (375)
T ss_dssp             -CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHH-HHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSH
T ss_pred             -CCCEEEECCCcccccccccCHHHHHHHHHHHHH-HHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCCh
Confidence             689999999986554445677889999999996 99999999887   79999999999996544 8899999999999


Q ss_pred             HHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec--CcccCceeHHHHHHH
Q 020880          151 YGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRDVVKI  224 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~a~~  224 (320)
                      |+.+|..+|.+++.+    +.+++++||+.+|||+.........+..++.............+  +..++|||++|+|++
T Consensus       180 Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a  259 (375)
T 1t2a_A          180 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEA  259 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHH
Confidence            999999999988764    67889999999999975321111112233333333323333444  468999999999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccc-cCCcc-----------cc---CCCCCCCCcc
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIK-PVSAS-----------SV---DRGVQSPADI  289 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~-~~~~~-----------~~---~~~~~~~~~~  289 (320)
                      ++.+++++.      .++||+++++.+|+.|+++.+.+.+|.+.++.. .+|..           ..   ..........
T Consensus       260 ~~~~~~~~~------~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (375)
T 1t2a_A          260 MWLMLQNDE------PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFL  333 (375)
T ss_dssp             HHHHHHSSS------CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBC
T ss_pred             HHHHHhcCC------CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchhh
Confidence            999998742      248999999999999999999999998643210 01110           00   0112233456


Q ss_pred             ccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          290 SMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       290 ~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      .+|++|++++|||+| ++++++|+++++|+.
T Consensus       334 ~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~  364 (375)
T 1t2a_A          334 QGDCTKAKQKLNWKPRVAFDELVREMVHADV  364 (375)
T ss_dssp             CBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHhcCCCccCCHHHHHHHHHHHHH
Confidence            789999999999999 899999999999985

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=8.1e-45  Score=320.33  Aligned_cols=301  Identities=19%  Similarity=0.287  Sum_probs=235.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCC--ChhhhhhhC--CCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTP--LPQLLLDAL--PHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~--~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      |+|||||||||||++|+++|+++ |   ++|++++|+..  ....+ ..+  ..+++++.+|++|++++.++++.. ++|
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d   75 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQ---DTVVNIDKLTYAGNLESL-SDISESNRYNFEHADICDSAEITRIFEQY-QPD   75 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCS---CEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHHHH-CCS
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCC---CeEEEEecCCCCCchhhh-hhhhcCCCeEEEECCCCCHHHHHHHHhhc-CCC
Confidence            47999999999999999999998 7   88999998752  22222 111  246888999999999999888754 899


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc--cCc-------eEEEeechhhhcccCC-----------C
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN--KEN-------LLIHLSTDQVYEGVKS-----------F  138 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~-------~~v~~Ss~~vy~~~~~-----------~  138 (320)
                      +||||||......+..+++..+++|+.++. +++++|.+.  +++       +|||+||.++||....           +
T Consensus        76 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~-~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~  154 (361)
T 1kew_A           76 AVMHLAAESHVDRSITGPAAFIETNIVGTY-ALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPL  154 (361)
T ss_dssp             EEEECCSCCCHHHHHHCTHHHHHHHTHHHH-HHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCC
T ss_pred             EEEECCCCcChhhhhhCHHHHHHHHHHHHH-HHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCC
Confidence            999999987544455678889999999996 999999988  776       9999999999986542           7


Q ss_pred             CcccCCCCCcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cc
Q 020880          139 YKEEDEIAPVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--EC  212 (320)
Q Consensus       139 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  212 (320)
                      ++|+++..|.+.|+.+|..+|.+++.+    +.+++++||+.||||...   ...++..++.... .+.++.++++  ..
T Consensus       155 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~  230 (361)
T 1kew_A          155 FTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHF---PEKLIPLVILNAL-EGKPLPIYGKGDQI  230 (361)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCC---TTSHHHHHHHHHH-HTCCEEEETTSCCE
T ss_pred             CCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCC---cccHHHHHHHHHH-cCCCceEcCCCcee
Confidence            899999899999999999999988765    678999999999999863   1223334444443 5666766654  57


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCc--cccCCCCCCCCccc
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSA--SSVDRGVQSPADIS  290 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  290 (320)
                      ++|+|++|+|++++.+++...     .+++||+++++.+|+.|+++.+.+.+|.+.+...+...  ............+.
T Consensus       231 ~~~i~v~Dva~a~~~~~~~~~-----~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~  305 (361)
T 1kew_A          231 RDWLYVEDHARALHMVVTEGK-----AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA  305 (361)
T ss_dssp             EEEEEHHHHHHHHHHHHHHCC-----TTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCC
T ss_pred             EeeEEHHHHHHHHHHHHhCCC-----CCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCCCCcccceee
Confidence            899999999999999997642     24599999999999999999999999865432111000  00111111234567


Q ss_pred             cChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          291 MDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       291 ~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      +|++|++++|||+| ++++++|+++++|++
T Consensus       306 ~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~  335 (361)
T 1kew_A          306 IDAGKISRELGWKPLETFESGIRKTVEWYL  335 (361)
T ss_dssp             BCCHHHHHHHCCCCSCCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHhCCCCccCHHHHHHHHHHHHH
Confidence            99999999999999 899999999999975

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=1e-44  Score=317.69  Aligned_cols=303  Identities=18%  Similarity=0.282  Sum_probs=231.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCc-ccHHHHHHHhCCCCEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG-SGFDAVALKFGQPDVVV   81 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~~~~d~Vi   81 (320)
                      |+|||||||||||++++++|+++ |   ++|++++|+.++...+..  ..+++++.+|++|. +.+.++++   ++|+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~---~~d~vi   72 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDH---YEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVK---KCDVVL   72 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTT---CEEEEEESCCGGGGGGTT--CTTEEEEECCTTTCSHHHHHHHH---HCSEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCC---CEEEEEeCCcchHHHhhc--CCCeEEEeccccCcHHHHHhhcc---CCCEEE
Confidence            58999999999999999999998 8   899999998765543322  24688899999985 45777776   789999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCC-------CCcchHHH
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEI-------APVNVYGK  153 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~-------~p~~~Y~~  153 (320)
                      ||||...+.....++...+++|+.++. +++++|++.+ ++|||+||.++||.... +++|+++.       .|.+.|+.
T Consensus        73 h~A~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~  150 (345)
T 2bll_A           73 PLVAIATPIEYTRNPLRVFELDFEENL-RIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSV  150 (345)
T ss_dssp             ECBCCCCHHHHHHSHHHHHHHHTHHHH-HHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHH
T ss_pred             EcccccCccchhcCHHHHHHHHHHHHH-HHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHH
Confidence            999986654444577888999999996 9999999988 79999999999997544 67888753       35668999


Q ss_pred             HHHHHHHHHHHH----cCCeeEEeecccccCCCCCCC-----CCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHH
Q 020880          154 SKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPV-----PKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVV  222 (320)
Q Consensus       154 sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a  222 (320)
                      +|..+|++++.+    +.+++++||+.||||+.....     ....+..++.... .+.++.+.++  +.++|+|++|+|
T Consensus       151 sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~v~Dva  229 (345)
T 2bll_A          151 SKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLV-EGSPIKLIDGGKQKRCFTDIRDGI  229 (345)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHH-HTCCEEEGGGSCCEEECEEHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHH-cCCCcEEECCCCEEEEEEEHHHHH
Confidence            999999988654    679999999999999864211     1122334444443 5667766654  688999999999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCC-CcCHHHHHHHHHHHhCCCCCccccCCccc---------cCCCCCCCCccccC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPD-RVSRVQMAEVVAEIRGYSTSLIKPVSASS---------VDRGVQSPADISMD  292 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~d  292 (320)
                      ++++.+++++..  ...+++||+++++ .+|+.|+++.+.+.+|.+.......+...         ............+|
T Consensus       230 ~a~~~~~~~~~~--~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  307 (345)
T 2bll_A          230 EALYRIIENAGN--RCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS  307 (345)
T ss_dssp             HHHHHHHHCGGG--TTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBC
T ss_pred             HHHHHHHhhccc--cCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhccc
Confidence            999999987531  0234599999986 89999999999999987654321111100         00001123557789


Q ss_pred             hHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          293 ITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       293 ~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      ++|++++|||+| ++++++|+++++|++
T Consensus       308 ~~k~~~~lG~~p~~~l~~~l~~~~~~~~  335 (345)
T 2bll_A          308 IRNAHRCLDWEPKIDMQETIDETLDFFL  335 (345)
T ss_dssp             CHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCccccHHHHHHHHHHHHH
Confidence            999999999999 899999999999985

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=6.5e-45  Score=318.59  Aligned_cols=291  Identities=14%  Similarity=0.098  Sum_probs=227.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|+|||||||||||++|+++|+++|   ++|++++|++++...+..   .+++++.+|++|++++.++++   ++|+|||
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~l~~---~~~~~~~~Dl~d~~~~~~~~~---~~d~vih   83 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAG---HDLVLIHRPSSQIQRLAY---LEPECRVAEMLDHAGLERALR---GLDGVIF   83 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECTTSCGGGGGG---GCCEEEECCTTCHHHHHHHTT---TCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEecChHhhhhhcc---CCeEEEEecCCCHHHHHHHHc---CCCEEEE
Confidence            4699999999999999999999999   899999998776544322   257889999999998888876   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC--CCcccCCCCC----cchHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS--FYKEEDEIAP----VNVYGKSKV  156 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~--~~~E~~~~~p----~~~Y~~sK~  156 (320)
                      +|+....  +..+++..+++|+.++. +++++|.+.++++|||+||.++|+....  ..+|+++..|    .+.|+.+|.
T Consensus        84 ~a~~~~~--~~~~~~~~~~~n~~~~~-~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~  160 (342)
T 2x4g_A           84 SAGYYPS--RPRRWQEEVASALGQTN-PFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKW  160 (342)
T ss_dssp             C--------------CHHHHHHHHHH-HHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHH
T ss_pred             CCccCcC--CCCCHHHHHHHHHHHHH-HHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHH
Confidence            9997542  34567889999999996 9999999999999999999999986543  3499999988    899999999


Q ss_pred             HHHHHHHHH---cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhh
Q 020880          157 AAEKFIYEK---CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL  233 (320)
Q Consensus       157 ~~e~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  233 (320)
                      .+|.+++.+   +.+++++||+.+||+....  ..  +..++... ..+....+ +++.++|+|++|+|++++.+++++.
T Consensus       161 ~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~--~~--~~~~~~~~-~~~~~~~~-~~~~~~~i~v~Dva~~~~~~~~~~~  234 (342)
T 2x4g_A          161 ALDEQAREQARNGLPVVIGIPGMVLGELDIG--PT--TGRVITAI-GNGEMTHY-VAGQRNVIDAAEAGRGLLMALERGR  234 (342)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECEEECSCCSS--CS--TTHHHHHH-HTTCCCEE-ECCEEEEEEHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHhhcCCcEEEEeCCceECCCCcc--cc--HHHHHHHH-HcCCCccc-cCCCcceeeHHHHHHHHHHHHhCCC
Confidence            999998875   6789999999999997621  11  22344443 35665555 7788999999999999999998753


Q ss_pred             ccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCcccc--------------C-------C-CCCCCCcccc
Q 020880          234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSV--------------D-------R-GVQSPADISM  291 (320)
Q Consensus       234 ~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~--------------~-------~-~~~~~~~~~~  291 (320)
                      .     +++||+++++ +|+.|+++.+.+.+|.+.++  ..+....              .       . .........+
T Consensus       235 ~-----g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (342)
T 2x4g_A          235 I-----GERYLLTGHN-LEMADLTRRIAELLGQPAPQ--PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFL  306 (342)
T ss_dssp             T-----TCEEEECCEE-EEHHHHHHHHHHHHTCCCCE--EECHHHHHHHHHHHHC----------------CCTTCCCCB
T ss_pred             C-----CceEEEcCCc-ccHHHHHHHHHHHhCCCCCC--cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCccc
Confidence            2     4599999999 99999999999999987653  2222100              0       0 0011346789


Q ss_pred             ChHHHHhhcCC-CccCHHHHHHHHHhhhc
Q 020880          292 DITKLVQTLNI-DPVTYKDGVKLTLAAEA  319 (320)
Q Consensus       292 d~~k~~~~lg~-~~~~~~~~l~~~i~~~~  319 (320)
                      |++|++++||| +|++++++|+++++|++
T Consensus       307 d~~k~~~~lG~~~p~~~~~~l~~~~~~~~  335 (342)
T 2x4g_A          307 DGRKAREELGFFSTTALDDTLLRAIDWFR  335 (342)
T ss_dssp             CCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             ChHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence            99999999999 99999999999999986

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=1.8e-44  Score=314.66  Aligned_cols=290  Identities=17%  Similarity=0.148  Sum_probs=228.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .||+|||||||||||++|+++|+++|   ++|++++|+..........+ .++.++.+|++|++++.++++.. ++|+||
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~-~~D~vi   94 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERG---DKVVGIDNFATGRREHLKDH-PNLTFVEGSIADHALVNQLIGDL-QPDAVV   94 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCGGGSCCC-TTEEEEECCTTCHHHHHHHHHHH-CCSEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEECCCccchhhHhhc-CCceEEEEeCCCHHHHHHHHhcc-CCcEEE
Confidence            47899999999999999999999999   89999999865432222211 46788999999999999888742 599999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc----ccCCCCcccCCCCCc-chHHHHHH
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE----GVKSFYKEEDEIAPV-NVYGKSKV  156 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~----~~~~~~~E~~~~~p~-~~Y~~sK~  156 (320)
                      ||||..... +..+++  +++|+.++. +++++|.+.++++|||+||.++|+    ....+++|++  .|. +.|+.+|.
T Consensus        95 h~A~~~~~~-~~~~~~--~~~N~~~~~-~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~--~p~~~~Y~~sK~  168 (333)
T 2q1w_A           95 HTAASYKDP-DDWYND--TLTNCVGGS-NVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPR--NPANSSYAISKS  168 (333)
T ss_dssp             ECCCCCSCT-TCHHHH--HHHHTHHHH-HHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCC--CCTTCHHHHHHH
T ss_pred             ECceecCCC-ccCChH--HHHHHHHHH-HHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCC--CCCCCchHHHHH
Confidence            999986543 233344  899999996 999999999989999999999998    5444788887  667 89999999


Q ss_pred             HHHHHHHH-HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhcc
Q 020880          157 AAEKFIYE-KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE  235 (320)
Q Consensus       157 ~~e~~~~~-~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  235 (320)
                      .+|.+++. +. +++++||+++|||+.    ...+...++.... .+..+.- ++..++|+|++|+|++++.+++++.  
T Consensus       169 ~~E~~~~~s~~-~~~ilR~~~v~gp~~----~~~~~~~~~~~~~-~~~~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--  239 (333)
T 2q1w_A          169 ANEDYLEYSGL-DFVTFRLANVVGPRN----VSGPLPIFFQRLS-EGKKCFV-TKARRDFVFVKDLARATVRAVDGVG--  239 (333)
T ss_dssp             HHHHHHHHHTC-CEEEEEESEEESTTC----CSSHHHHHHHHHH-TTCCCEE-EECEECEEEHHHHHHHHHHHHTTCC--
T ss_pred             HHHHHHHhhhC-CeEEEeeceEECcCC----cCcHHHHHHHHHH-cCCeeeC-CCceEeeEEHHHHHHHHHHHHhcCC--
Confidence            99999999 77 999999999999983    1233444454443 3432222 4568899999999999999998743  


Q ss_pred             ccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHH
Q 020880          236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLT  314 (320)
Q Consensus       236 ~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~  314 (320)
                          +++||+++++.+|+.|+++.+.+.+|.+ .+. ..+... ...........+|++|++++ ||+| ++++++|+++
T Consensus       240 ----g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~-~~~~~~-~~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~~l~~~  311 (333)
T 2q1w_A          240 ----HGAYHFSSGTDVAIKELYDAVVEAMALP-SYP-EPEIRE-LGPDDAPSILLDPSRTIQDF-GKIEFTPLKETVAAA  311 (333)
T ss_dssp             ----CEEEECSCSCCEEHHHHHHHHHHHTTCS-SCC-CCEEEE-CCTTSCCCCCBCCHHHHHHH-CCCCCCCHHHHHHHH
T ss_pred             ----CCEEEeCCCCCccHHHHHHHHHHHhCCC-Cce-eCCCCC-cccccccccccCCHHHHHhc-CCCcCCCHHHHHHHH
Confidence                4599999999999999999999999987 322 222111 11111235678999999998 9999 8999999999


Q ss_pred             Hhhhc
Q 020880          315 LAAEA  319 (320)
Q Consensus       315 i~~~~  319 (320)
                      ++|++
T Consensus       312 ~~~~~  316 (333)
T 2q1w_A          312 VAYFR  316 (333)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=2e-45  Score=319.05  Aligned_cols=283  Identities=21%  Similarity=0.264  Sum_probs=226.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC----hhhhhhhC-CCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL----PQLLLDAL-PHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~----~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      ||+|||||||||||++|+++|+++|   ++|++++|+.+.    ...+.... ..+++++.+|++             ++
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-------------~~   70 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASG---EEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-------------DV   70 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-------------TE
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCC---CEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-------------cC
Confidence            7899999999999999999999999   899999998652    11111100 122333344433             78


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHH
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKV  156 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~  156 (320)
                      |+|||+|+......+..++...++ |+.++. +++++|++.++++|||+||.++|+.... +++|+++..|.+.|+.+|.
T Consensus        71 d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~-~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~  148 (321)
T 3vps_A           71 RLVYHLASHKSVPRSFKQPLDYLD-NVDSGR-HLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKV  148 (321)
T ss_dssp             EEEEECCCCCCHHHHTTSTTTTHH-HHHHHH-HHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred             CEEEECCccCChHHHHhCHHHHHH-HHHHHH-HHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHH
Confidence            999999998776555667777888 999995 9999999999999999999999997655 8999999999999999999


Q ss_pred             HHHHHHHHH----cC-CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHH
Q 020880          157 AAEKFIYEK----CS-NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALT  229 (320)
Q Consensus       157 ~~e~~~~~~----~~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~  229 (320)
                      .+|++++.+    +. +++++||+.+|||+...   ..++..++.. +..+.++.++++  ..++|+|++|+|++++.++
T Consensus       149 ~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~  224 (321)
T 3vps_A          149 GLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP---DALVPRLCAN-LLTRNELPVEGDGEQRRDFTYITDVVDKLVALA  224 (321)
T ss_dssp             HHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT---TSHHHHHHHH-HHHHSEEEEETTSCCEECEEEHHHHHHHHHHGG
T ss_pred             HHHHHHHHHHHHcCCCceEEEEeccccCcCCCC---CChHHHHHHH-HHcCCCeEEeCCCCceEceEEHHHHHHHHHHHH
Confidence            999999885    55 89999999999998742   2334444444 445777777764  6899999999999999999


Q ss_pred             hhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc--cCH
Q 020880          230 NRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP--VTY  307 (320)
Q Consensus       230 ~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~--~~~  307 (320)
                      +++..     + +||+++++.+|+.|+++.+. .+|.+..+.. .     +..........+|++|++++|||+|  +++
T Consensus       225 ~~~~~-----g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~-~-----~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~  291 (321)
T 3vps_A          225 NRPLP-----S-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVAR-K-----QPRPNEITEFRADTALQTRQIGERSGGIGI  291 (321)
T ss_dssp             GSCCC-----S-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEE-E-----CCCTTCCSBCCBCCHHHHHHHCCCSCCCCH
T ss_pred             hcCCC-----C-eEEecCCCcccHHHHHHHHH-HhCCCCcccc-C-----CCCCCCcceeeccHHHHHHHhCCCCCcCCH
Confidence            87432     4 99999999999999999999 9998765431 1     1223345678899999999999999  899


Q ss_pred             HHHHHHHHhhhcC
Q 020880          308 KDGVKLTLAAEAT  320 (320)
Q Consensus       308 ~~~l~~~i~~~~~  320 (320)
                      +++|+++++|+++
T Consensus       292 ~~~l~~~~~~~~~  304 (321)
T 3vps_A          292 EEGIRLTLEWWQS  304 (321)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999999863

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=3e-45  Score=316.76  Aligned_cols=299  Identities=15%  Similarity=0.131  Sum_probs=230.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhc--cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEI--EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~--g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      +|+|||||||||||++|+++|+++  |   ++|++++|+..... +.    .+++++.+|++|++++.++++.. ++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~-~~----~~~~~~~~D~~d~~~~~~~~~~~-~~d~v   72 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGT---ENVIASDIRKLNTD-VV----NSGPFEVVNALDFNQIEHLVEVH-KITDI   72 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCG---GGEEEEESCCCSCH-HH----HSSCEEECCTTCHHHHHHHHHHT-TCCEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCC---CEEEEEcCCCcccc-cc----CCCceEEecCCCHHHHHHHHhhc-CCCEE
Confidence            478999999999999999999999  8   89999999866532 21    24678999999999999888764 89999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC--CCCcccCCCCCcchHHHHHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAA  158 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~--~~~~E~~~~~p~~~Y~~sK~~~  158 (320)
                      ||+|+.... .+..+++..+++|+.++. +++++|++.++++|||+||.++|+...  .+.+|+++..|.++|+.+|..+
T Consensus        73 ih~a~~~~~-~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~  150 (312)
T 2yy7_A           73 YLMAALLSA-TAEKNPAFAWDLNMNSLF-HVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAG  150 (312)
T ss_dssp             EECCCCCHH-HHHHCHHHHHHHHHHHHH-HHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHH
T ss_pred             EECCccCCC-chhhChHHHHHHHHHHHH-HHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHH
Confidence            999997543 234577889999999996 999999999999999999999998654  3788999999999999999999


Q ss_pred             HHHHHHH----cCCeeEEeecccccCCCCCCCC-CCChHHHHHHHHhcCCceEeec--CcccCceeHHHHHHHHHHHHhh
Q 020880          159 EKFIYEK----CSNFAILRSSIIYGPQTISPVP-KSLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRDVVKIILALTNR  231 (320)
Q Consensus       159 e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~a~~~~~~~~~  231 (320)
                      |.+++.+    +.+++++||+.+||+...+... .......+...+..+ ++..++  +..++|+|++|+|++++.++++
T Consensus       151 e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  229 (312)
T 2yy7_A          151 ERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADK-KYECFLSSETKMPMMYMDDAIDATINIMKA  229 (312)
T ss_dssp             HHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTS-EEEESSCTTCCEEEEEHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCC-CeEEecCCCceeeeeeHHHHHHHHHHHHhC
Confidence            9988764    6789999999999986532211 112333444444444 444443  4689999999999999999987


Q ss_pred             hhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHH
Q 020880          232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDG  310 (320)
Q Consensus       232 ~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~  310 (320)
                      +.... ..+++||+++ +.+|+.|+++.+.+.+|.. .+. ..+..  ...........+|++|++++|||+| ++++++
T Consensus       230 ~~~~~-~~~~~~ni~~-~~~s~~e~~~~i~~~~~~~-~i~-~~~~~--~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~  303 (312)
T 2yy7_A          230 PVEKI-KIHSSYNLAA-MSFTPTEIANEIKKHIPEF-TIT-YEPDF--RQKIADSWPASIDDSQAREDWDWKHTFDLESM  303 (312)
T ss_dssp             CGGGC-CCSSCEECCS-EEECHHHHHHHHHTTCTTC-EEE-ECCCT--HHHHHTTSCSSBCCHHHHHHHCCCCCCCHHHH
T ss_pred             ccccc-ccCceEEeCC-CccCHHHHHHHHHHHCCCC-ceE-eccCc--cccccccccccCCHHHHHHHcCCCCCCCHHHH
Confidence            53210 0135999986 7899999999999988732 111 11110  0000112345789999999999999 799999


Q ss_pred             HHHHHhhhc
Q 020880          311 VKLTLAAEA  319 (320)
Q Consensus       311 l~~~i~~~~  319 (320)
                      |+++++|++
T Consensus       304 l~~~~~~~k  312 (312)
T 2yy7_A          304 TKDMIEHLS  312 (312)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            999999986

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-44  Score=320.86  Aligned_cols=305  Identities=19%  Similarity=0.123  Sum_probs=231.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh--hhhhh---h---CCCcceEEEeeCCCcccHHHHHHHh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP--QLLLD---A---LPHSFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~--~~~~~---~---~~~~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      ||+|||||||||||++++++|+++|   ++|++++|+.+..  ..+..   .   ...++.++.+|++|++++.++++..
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKG---YEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc
Confidence            5799999999999999999999999   8999999986531  11111   0   0246788899999999999988865


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccC---ceEEEeechhhhcccCC-CCcccCCCCCcch
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE---NLLIHLSTDQVYEGVKS-FYKEEDEIAPVNV  150 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~  150 (320)
                       ++|+|||+||......+..++...+++|+.++. +++++|.+.++   ++||++||.++|+.... +++|+++..|.+.
T Consensus        78 -~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~  155 (372)
T 1db3_A           78 -QPDEVYNLGAMSHVAVSFESPEYTADVDAMGTL-RLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSP  155 (372)
T ss_dssp             -CCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHH-HHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSH
T ss_pred             -CCCEEEECCcccCccccccCHHHHHHHHHHHHH-HHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCCh
Confidence             689999999987655555677888999999996 99999999887   79999999999997554 8899999999999


Q ss_pred             HHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCC-ceEeec--CcccCceeHHHHHH
Q 020880          151 YGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGE-KVEFFH--DECRCPVYVRDVVK  223 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~i~v~D~a~  223 (320)
                      |+.+|..+|.+++.+    +.+++++|++.+|||+.........+..++.... .+. +....+  ++.++|+|++|+|+
T Consensus       156 Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~-~g~~~~~~~g~~~~~~~~i~v~Dva~  234 (372)
T 1db3_A          156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIA-QGLESCLYLGNMDSLRDWGHAKDYVK  234 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHH-TTSCCCEEESCTTCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHH-cCCCCceeecCCCceeeeeEHHHHHH
Confidence            999999999988764    6788999999999997632111111223333333 444 333444  46899999999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccc-cCCcc---------------------cc-C
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIK-PVSAS---------------------SV-D  280 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~-~~~~~---------------------~~-~  280 (320)
                      +++.+++++.      +++||+++++.+|+.|+++.+.+.+|.+.++.. ..|..                     .. +
T Consensus       235 a~~~~~~~~~------~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (372)
T 1db3_A          235 MQWMMLQQEQ------PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDP  308 (372)
T ss_dssp             HHHHTTSSSS------CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECG
T ss_pred             HHHHHHhcCC------CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccc
Confidence            9999987642      248999999999999999999999987543210 00000                     00 0


Q ss_pred             --CCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          281 --RGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       281 --~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                        ..........+|++|++++|||+| ++++|+|+++++|+.
T Consensus       309 ~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~  350 (372)
T 1db3_A          309 RYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDL  350 (372)
T ss_dssp             GGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             cccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHH
Confidence              112223456789999999999999 899999999999985

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=1.6e-44  Score=320.62  Aligned_cols=303  Identities=16%  Similarity=0.077  Sum_probs=233.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-----hhhhhhhC---CC-cceEEEeeCCCcccHHHHHHHh
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-----PQLLLDAL---PH-SFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-----~~~~~~~~---~~-~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      |+|||||||||||++|+++|+++|   ++|++++|+.+.     ...+....   .. ++.++.+|++|++++.++++..
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKG---YEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCC---CEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc
Confidence            789999999999999999999999   899999998654     11111110   12 6788999999999999988865


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-----eEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-----LLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-----~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                       ++|+||||||......+..+++..+++|+.++. +++++|.+.+++     +|||+||.++||....+++|+++..|.+
T Consensus       106 -~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~-~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~  183 (381)
T 1n7h_A          106 -KPDEVYNLAAQSHVAVSFEIPDYTADVVATGAL-RLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRS  183 (381)
T ss_dssp             -CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHH-HHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCS
T ss_pred             -CCCEEEECCcccCccccccCHHHHHHHHHHHHH-HHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCC
Confidence             689999999987654445678889999999996 999999988776     9999999999997666899999999999


Q ss_pred             hHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec--CcccCceeHHHHHH
Q 020880          150 VYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRDVVK  223 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~a~  223 (320)
                      .|+.+|..+|.+++.+    +.+++++|++++|||+.........+..++.............+  +..++|+|++|+|+
T Consensus       184 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~  263 (381)
T 1n7h_A          184 PYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE  263 (381)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHH
Confidence            9999999999988765    56778999999999986321111112223333332222333344  46889999999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCC
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID  303 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~  303 (320)
                      +++.+++++.      .++||+++++.+|+.|+++.+.+.+|.+.........  ............+|++|++++|||+
T Consensus       264 a~~~~~~~~~------~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~d~~k~~~~lG~~  335 (381)
T 1n7h_A          264 AMWLMLQQEK------PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQ--RYFRPAEVDNLQGDASKAKEVLGWK  335 (381)
T ss_dssp             HHHHHHTSSS------CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECG--GGSCSSCCCBCCBCCHHHHHHHCCC
T ss_pred             HHHHHHhCCC------CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCc--ccCCccccccccCCHHHHHHhcCCc
Confidence            9999998742      2499999999999999999999999976321111111  0111223345678999999999999


Q ss_pred             c-cCHHHHHHHHHhhhc
Q 020880          304 P-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       304 ~-~~~~~~l~~~i~~~~  319 (320)
                      | ++++++|+++++|+.
T Consensus       336 p~~~l~e~l~~~~~~~~  352 (381)
T 1n7h_A          336 PQVGFEKLVKMMVDEDL  352 (381)
T ss_dssp             CCSCHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHH
Confidence            9 899999999999974

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=6.7e-44  Score=312.30  Aligned_cols=292  Identities=22%  Similarity=0.313  Sum_probs=228.9

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC--CCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      |++|+|||||||||||++|+++|+++|   ++|++++|+...........  ..++.++.+|+.+..     +   .++|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~---~~~d   93 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDG---HEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL-----Y---IEVD   93 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC-----C---CCCS
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCC---CEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh-----h---cCCC
Confidence            347899999999999999999999999   89999998754322211111  246788999998864     2   3899


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-CCCccc-----CCCCCcchHH
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-SFYKEE-----DEIAPVNVYG  152 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-~~~~E~-----~~~~p~~~Y~  152 (320)
                      +|||||+......+..++...+++|+.++. +++++|++.++ ++||+||.++||... .+++|+     ++..|.+.|+
T Consensus        94 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~-~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~  171 (343)
T 2b69_A           94 QIYHLASPASPPNYMYNPIKTLKTNTIGTL-NMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYD  171 (343)
T ss_dssp             EEEECCSCCSHHHHTTCHHHHHHHHHHHHH-HHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHH
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHH-HHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchH
Confidence            999999986554445677888999999996 99999999887 999999999998654 377777     4667788999


Q ss_pred             HHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHH
Q 020880          153 KSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIIL  226 (320)
Q Consensus       153 ~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~  226 (320)
                      .+|..+|++++.+    +.+++++||+.+|||+.... ...++..++.... .+.++.++++  ..++|+|++|+|++++
T Consensus       172 ~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~Dva~a~~  249 (343)
T 2b69_A          172 EGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN-DGRVVSNFILQAL-QGEPLTVYGSGSQTRAFQYVSDLVNGLV  249 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTT-CCCHHHHHHHHHH-HTCCEEEESSSCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCC-cccHHHHHHHHHH-cCCCceEcCCCCeEEeeEeHHHHHHHHH
Confidence            9999999987653    67899999999999976322 1233444555444 4666666654  5889999999999999


Q ss_pred             HHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-c
Q 020880          227 ALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-V  305 (320)
Q Consensus       227 ~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~  305 (320)
                      .+++.+.      +++||+++++.+|+.|+++.+.+.+|.+.++. ..+.     .........+|++|++++|||+| +
T Consensus       250 ~~~~~~~------~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-~~p~-----~~~~~~~~~~d~~k~~~~lG~~p~~  317 (343)
T 2b69_A          250 ALMNSNV------SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQ-FLSE-----AQDDPQKRKPDIKKAKLMLGWEPVV  317 (343)
T ss_dssp             HHHTSSC------CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEE-EECC-----CTTCCCCCCBCCHHHHHHHCCCCCS
T ss_pred             HHHhcCC------CCeEEecCCCCCcHHHHHHHHHHHhCCCCCce-eCCC-----CCCCCceecCCHHHHHHHcCCCCCC
Confidence            9987631      34899999999999999999999999876543 2221     11234457789999999999999 8


Q ss_pred             CHHHHHHHHHhhhc
Q 020880          306 TYKDGVKLTLAAEA  319 (320)
Q Consensus       306 ~~~~~l~~~i~~~~  319 (320)
                      +++++|+++++|++
T Consensus       318 ~l~e~l~~~~~~~~  331 (343)
T 2b69_A          318 PLEEGLNKAIHYFR  331 (343)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH
Confidence            99999999999975

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=2.6e-44  Score=313.18  Aligned_cols=286  Identities=20%  Similarity=0.218  Sum_probs=227.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+|||||||||||++|+++|+++|   ++|++++|+.+........+ .++.++.+|++|++++.++++.+ ++|+||
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~l-~~v~~~~~Dl~d~~~~~~~~~~~-~~D~vi   93 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQG---HEILVIDNFATGKREVLPPV-AGLSVIEGSVTDAGLLERAFDSF-KPTHVV   93 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGT---CEEEEEECCSSSCGGGSCSC-TTEEEEECCTTCHHHHHHHHHHH-CCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCccchhhhhcc-CCceEEEeeCCCHHHHHHHHhhc-CCCEEE
Confidence            46899999999999999999999999   89999999765433222222 46788999999999998888765 899999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC---CCcccCCCCCcchHHHHHHHH
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS---FYKEEDEIAPVNVYGKSKVAA  158 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~---~~~E~~~~~p~~~Y~~sK~~~  158 (320)
                      ||||..... +..+++  +++|+.++. +++++|.+.++++|||+||.++|+....   +++|++  .|.+.|+.+|..+
T Consensus        94 h~A~~~~~~-~~~~~~--~~~N~~~~~-~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~~  167 (330)
T 2pzm_A           94 HSAAAYKDP-DDWAED--AATNVQGSI-NVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTAG  167 (330)
T ss_dssp             ECCCCCSCT-TCHHHH--HHHHTHHHH-HHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHHH
T ss_pred             ECCccCCCc-cccChh--HHHHHHHHH-HHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHHH
Confidence            999986543 233344  899999996 9999999989899999999999986533   788887  6788999999999


Q ss_pred             HHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHH-HHHHHHhhhhcccc
Q 020880          159 EKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDK  237 (320)
Q Consensus       159 e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~-~~~~~~~~~~~~~~  237 (320)
                      |.+++.++.+++++||+++|||+.    ...+...++.... .+..+.-.+. .++|+|++|+|+ +++.+++++.    
T Consensus       168 e~~~~~~~~~~~~iR~~~v~gp~~----~~~~~~~~~~~~~-~~~~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~----  237 (330)
T 2pzm_A          168 EAFLMMSDVPVVSLRLANVTGPRL----AIGPIPTFYKRLK-AGQKCFCSDT-VRDFLDMSDFLAIADLSLQEGRP----  237 (330)
T ss_dssp             HHHHHTCSSCEEEEEECEEECTTC----CSSHHHHHHHHHH-TTCCCCEESC-EECEEEHHHHHHHHHHHTSTTCC----
T ss_pred             HHHHHHcCCCEEEEeeeeeECcCC----CCCHHHHHHHHHH-cCCEEeCCCC-EecceeHHHHHHHHHHHHhhcCC----
Confidence            999999888899999999999985    1223333444333 3442222234 789999999999 9999988732    


Q ss_pred             ccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHH-----HhhcCCCc-cCHHHHH
Q 020880          238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL-----VQTLNIDP-VTYKDGV  311 (320)
Q Consensus       238 ~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-----~~~lg~~~-~~~~~~l  311 (320)
                        +++||+++++.+|+.|+++.+.+.+|.+ ++. ..+...      ......+|++|+     ++ |||+| ++++++|
T Consensus       238 --g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~-~~~~~~------~~~~~~~d~~k~~~~~l~~-lG~~p~~~~~~~l  306 (330)
T 2pzm_A          238 --TGVFNVSTGEGHSIKEVFDVVLDYVGAT-LAE-PVPVVA------PGADDVPSVVLDPSKTETE-FGWKAKVDFKDTI  306 (330)
T ss_dssp             --CEEEEESCSCCEEHHHHHHHHHHHHTCC-CSS-CCCEEC------CCTTSCSEECBCCHHHHHH-HCCCCCCCHHHHH
T ss_pred             --CCEEEeCCCCCCCHHHHHHHHHHHhCCC-Cce-eCCCCc------chhhccCCHHHHhhchHHH-cCCcccCCHHHHH
Confidence              4599999999999999999999999987 322 222111      334567788888     77 99999 8999999


Q ss_pred             HHHHhhhc
Q 020880          312 KLTLAAEA  319 (320)
Q Consensus       312 ~~~i~~~~  319 (320)
                      +++++|++
T Consensus       307 ~~~~~~~~  314 (330)
T 2pzm_A          307 TGQLAWYD  314 (330)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999985

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=3.8e-44  Score=306.10  Aligned_cols=274  Identities=16%  Similarity=0.169  Sum_probs=217.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      |||+|||||| ||||++|+++|+++|   ++|++++|++++...+..   .+++++.+|++|.+        +.++|+||
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d~~--------~~~~d~vi   68 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQG---WRIIGTSRNPDQMEAIRA---SGAEPLLWPGEEPS--------LDGVTHLL   68 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGT---CEEEEEESCGGGHHHHHH---TTEEEEESSSSCCC--------CTTCCEEE
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCC---CEEEEEEcChhhhhhHhh---CCCeEEEecccccc--------cCCCCEEE
Confidence            4689999998 999999999999999   899999999766554433   46888999999954        24899999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhh--ccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHH
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE--NKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAA  158 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~--~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~  158 (320)
                      |+|+.....    ++         .+ .++++++++  .++++|||+||.++||.... +++|+++..|.++|+.+|..+
T Consensus        69 ~~a~~~~~~----~~---------~~-~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  134 (286)
T 3ius_A           69 ISTAPDSGG----DP---------VL-AALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMA  134 (286)
T ss_dssp             ECCCCBTTB----CH---------HH-HHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHH
T ss_pred             ECCCccccc----cH---------HH-HHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHH
Confidence            999975332    11         11 478888888  77889999999999997665 799999999999999999999


Q ss_pred             HHHHHHH-cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec-CcccCceeHHHHHHHHHHHHhhhhccc
Q 020880          159 EKFIYEK-CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH-DECRCPVYVRDVVKIILALTNRWLSED  236 (320)
Q Consensus       159 e~~~~~~-~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~D~a~~~~~~~~~~~~~~  236 (320)
                      |++++.+ +.+++++||+.+||++....          . .+..+....+.+ ++.++|||++|+|++++.+++++..  
T Consensus       135 E~~~~~~~~~~~~ilRp~~v~G~~~~~~----------~-~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~--  201 (286)
T 3ius_A          135 EQQWQAVPNLPLHVFRLAGIYGPGRGPF----------S-KLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDP--  201 (286)
T ss_dssp             HHHHHHSTTCCEEEEEECEEEBTTBSSS----------T-TSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCCT--
T ss_pred             HHHHHhhcCCCEEEEeccceECCCchHH----------H-HHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCCC--
Confidence            9999998 88999999999999986421          1 122466666655 4688999999999999999998542  


Q ss_pred             cccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCC--CCCCCCccccChHHHHhhcCCCc-c-CHHHHHH
Q 020880          237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDR--GVQSPADISMDITKLVQTLNIDP-V-TYKDGVK  312 (320)
Q Consensus       237 ~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~k~~~~lg~~~-~-~~~~~l~  312 (320)
                         +++||+++++.+|+.|+++.+.+.+|.+.+............  .........+|++|++++|||+| + +++++|+
T Consensus       202 ---g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~  278 (286)
T 3ius_A          202 ---GAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLE  278 (286)
T ss_dssp             ---TCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHH
T ss_pred             ---CCEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHH
Confidence               459999999999999999999999998755321211110000  00113567899999999999999 6 7999999


Q ss_pred             HHHhhhcC
Q 020880          313 LTLAAEAT  320 (320)
Q Consensus       313 ~~i~~~~~  320 (320)
                      ++++..++
T Consensus       279 ~~~~~~~~  286 (286)
T 3ius_A          279 ALQADAET  286 (286)
T ss_dssp             HHHHTCCC
T ss_pred             HHHHhccC
Confidence            99987654

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=5.1e-44  Score=319.88  Aligned_cols=303  Identities=19%  Similarity=0.159  Sum_probs=229.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh-----------------hh---hhhCCCcceEEEeeCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-----------------LL---LDALPHSFVFFDVDLK   62 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~-----------------~~---~~~~~~~~~~~~~Dl~   62 (320)
                      |++|||||||||||++|+++|+++|   ++|+++.|......                 .+   ......+++++.+|++
T Consensus        11 ~~~vlVTG~tGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~   87 (404)
T 1i24_A           11 GSRVMVIGGDGYCGWATALHLSKKN---YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   87 (404)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhCC---CeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence            6899999999999999999999999   88999887532110                 11   0111346888999999


Q ss_pred             CcccHHHHHHHhCCCCEEEECCCccCccccccCch---hhhhccccccHHHHHhhhhhccC-ceEEEeechhhhcccCCC
Q 020880           63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPD---SAMSINVPSSLVNWLSSFTENKE-NLLIHLSTDQVYEGVKSF  138 (320)
Q Consensus        63 d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~---~~~~~n~~~~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~  138 (320)
                      |++++.++++.. ++|+|||+||......+..+++   ..+++|+.++. +++++|.+.++ ++|||+||.++||....+
T Consensus        88 d~~~~~~~~~~~-~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~-~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~  165 (404)
T 1i24_A           88 DFEFLAESFKSF-EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTL-NVLFAIKEFGEECHLVKLGTMGEYGTPNID  165 (404)
T ss_dssp             SHHHHHHHHHHH-CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHH-HHHHHHHHHCTTCEEEEECCGGGGCCCSSC
T ss_pred             CHHHHHHHHhcc-CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHH-HHHHHHHHhCCCcEEEEeCcHHHhCCCCCC
Confidence            999999888854 5999999999865443334443   47889999996 99999999887 599999999999976666


Q ss_pred             Cccc--------------CCCCCcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCC-----------C--
Q 020880          139 YKEE--------------DEIAPVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPV-----------P--  187 (320)
Q Consensus       139 ~~E~--------------~~~~p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~-----------~--  187 (320)
                      ++|+              .+..|.++|+.+|..+|.+++.+    +.+++++||+.||||+.....           .  
T Consensus       166 ~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~  245 (404)
T 1i24_A          166 IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAV  245 (404)
T ss_dssp             BCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTT
T ss_pred             CCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccc
Confidence            7775              46678889999999999987764    678999999999999863200           0  


Q ss_pred             -CCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHH-
Q 020880          188 -KSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEI-  263 (320)
Q Consensus       188 -~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~-  263 (320)
                       ...+..++..+. .+.++.++++  +.++|||++|+|++++.+++++...+  ..++||+++ +.+|+.|+++.+.+. 
T Consensus       246 ~~~~~~~~~~~~~-~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g--~~~~yni~~-~~~s~~e~~~~i~~~~  321 (404)
T 1i24_A          246 FGTALNRFCVQAA-VGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAG--EFRVFNQFT-EQFSVNELASLVTKAG  321 (404)
T ss_dssp             TCCHHHHHHHHHH-HTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTT--CEEEEEECS-EEEEHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHH-cCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCC--CceEEEECC-CCCcHHHHHHHHHHHH
Confidence             233445555444 5677767665  57999999999999999998743211  015999988 889999999999998 


Q ss_pred             --hCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          264 --RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       264 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                        +|.+.+.. ..+..   ........+.+|++|++ +|||+| ++++++++++++|++
T Consensus       322 ~~~g~~~~~~-~~p~~---~~~~~~~~~~~d~~k~~-~LG~~p~~~~~~~l~~~~~~~~  375 (404)
T 1i24_A          322 SKLGLDVKKM-TVPNP---RVEAEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAV  375 (404)
T ss_dssp             HTTTCCCCEE-EECCS---SCSCSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHH
T ss_pred             HhhCCCcccc-ccCcc---cCccccceEecCHHHHH-HcCCCcCcCHHHHHHHHHHHHH
Confidence              67664432 12211   11112345678999997 699999 899999999999874

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=4.1e-43  Score=308.94  Aligned_cols=296  Identities=21%  Similarity=0.249  Sum_probs=228.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH--hCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK--FGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~~d~V   80 (320)
                      +|+|||||||||||++|+++|+++|.  ++|+++.|++.... . ..+. .+. +.+|++|++.+.++++.  ++++|+|
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~-~-~~~~-~~~-~~~d~~~~~~~~~~~~~~~~~~~d~V  119 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGI--TDILVVDNLKDGTK-F-VNLV-DLN-IADYMDKEDFLIQIMAGEEFGDVEAI  119 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTC--CCEEEEECCSSGGG-G-GGTT-TSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--cEEEEEecCCCcch-h-hccc-Cce-EeeecCcHHHHHHHHhhcccCCCCEE
Confidence            47899999999999999999999984  57888888765421 1 1111 233 67899998888887762  1259999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAE  159 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~e  159 (320)
                      ||+|+....  +..+++..+++|+.++. +++++|.+.++ +|||+||.++|+.... +++|+++..|.+.|+.+|..+|
T Consensus       120 ih~A~~~~~--~~~~~~~~~~~n~~~~~-~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E  195 (357)
T 2x6t_A          120 FHEGACSST--TEWDGKYMMDNNYQYSK-ELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFD  195 (357)
T ss_dssp             EECCSCCCT--TCCCHHHHHHHTHHHHH-HHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHH
T ss_pred             EECCcccCC--ccCCHHHHHHHHHHHHH-HHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHH
Confidence            999997654  34567889999999996 99999999999 9999999999997654 8999999999999999999999


Q ss_pred             HHHHHHc----CCeeEEeecccccCCCCCCCC-CCChHHHHHHHHhcCCceEeecC--c-ccCceeHHHHHHHHHHHHhh
Q 020880          160 KFIYEKC----SNFAILRSSIIYGPQTISPVP-KSLPIQWIDSVLSKGEKVEFFHD--E-CRCPVYVRDVVKIILALTNR  231 (320)
Q Consensus       160 ~~~~~~~----~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~i~v~D~a~~~~~~~~~  231 (320)
                      .+++.+.    .+++++||+.||||+...... ..++..++.. +..+.++.++++  . .++|+|++|+|++++.++++
T Consensus       196 ~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~  274 (357)
T 2x6t_A          196 EYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQ-LNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN  274 (357)
T ss_dssp             HHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHH-HHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHH-HHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhc
Confidence            9998864    588999999999998642111 1233334443 445666666654  5 78999999999999999987


Q ss_pred             hhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCcc-ccCCccccCCCCCCCCccccChHHHHhhcCC-Cc-cCHH
Q 020880          232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLI-KPVSASSVDRGVQSPADISMDITKLVQTLNI-DP-VTYK  308 (320)
Q Consensus       232 ~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~-~~-~~~~  308 (320)
                      +.      +++||+++++.+|+.|+++.+.+.+|.+ .+. .+.+..   ..........+|++|+++ ||| +| ++++
T Consensus       275 ~~------~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~---~~~~~~~~~~~~~~k~~~-lG~~~~~~~l~  343 (357)
T 2x6t_A          275 GV------SGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDK---LKGRYQAFTQADLTNLRA-AGYDKPFKTVA  343 (357)
T ss_dssp             CC------CEEEEESCSCCEEHHHHHHHHHHHHTCC-CCEEECCCGG---GTTSCCSBCCCCCHHHHH-TTCCCCCCCHH
T ss_pred             CC------CCeEEecCCCcccHHHHHHHHHHHcCCC-CceecCCCcc---cccccccccccCHHHHHH-cCCCCCCCCHH
Confidence            43      4599999999999999999999999987 221 122211   111123456789999976 899 67 8999


Q ss_pred             HHHHHHHhhhcC
Q 020880          309 DGVKLTLAAEAT  320 (320)
Q Consensus       309 ~~l~~~i~~~~~  320 (320)
                      ++|+++++|+++
T Consensus       344 e~l~~~~~~~~~  355 (357)
T 2x6t_A          344 EGVTEYMAWLNR  355 (357)
T ss_dssp             HHHHHHHHHHC-
T ss_pred             HHHHHHHHHHhh
Confidence            999999999864

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=4.3e-43  Score=302.93  Aligned_cols=294  Identities=21%  Similarity=0.240  Sum_probs=212.6

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh-hhhhhCCCcceEEEeeCCCcccHHHHHHH--hCCCCEEE
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-LLLDALPHSFVFFDVDLKSGSGFDAVALK--FGQPDVVV   81 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~~d~Vi   81 (320)
                      +|||||||||||++|+++|+++|.  ++|+++.|++.... ....    .+. +.+|++|.+.+.++++.  .+++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~----~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi   73 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGI--TDILVVDNLKDGTKFVNLV----DLN-IADYMDKEDFLIQIMAGEEFGDVEAIF   73 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTC--CCEEEEECCSSGGGGHHHH----TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCC--cEEEEEccCCCCchhhhcC----cce-eccccccHHHHHHHHhccccCCCcEEE
Confidence            599999999999999999999984  46888888765431 1111    223 67899998888887761  01499999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHHHH
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEK  160 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~e~  160 (320)
                      |+|+....  +..+++..+++|+.++. +++++|++.++ +|||+||.++|+.... +++|+++..|.++|+.+|..+|.
T Consensus        74 ~~a~~~~~--~~~~~~~~~~~n~~~~~-~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  149 (310)
T 1eq2_A           74 HEGACSST--TEWDGKYMMDNNYQYSK-ELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDE  149 (310)
T ss_dssp             ECCSCCCT--TCCCHHHHHHHTHHHHH-HHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHH
T ss_pred             ECcccccC--cccCHHHHHHHHHHHHH-HHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence            99997654  34577889999999996 99999999999 9999999999997655 88999999999999999999999


Q ss_pred             HHHHH----cCCeeEEeecccccCCCCCCC-CCCChHHHHHHHHhcCCceEeecC--c-ccCceeHHHHHHHHHHHHhhh
Q 020880          161 FIYEK----CSNFAILRSSIIYGPQTISPV-PKSLPIQWIDSVLSKGEKVEFFHD--E-CRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       161 ~~~~~----~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~i~v~D~a~~~~~~~~~~  232 (320)
                      +++.+    +.+++++||+.+|||+..... ...++..++.. +..+.++.++++  . .++|+|++|+|++++.+++++
T Consensus       150 ~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~  228 (310)
T 1eq2_A          150 YVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQ-LNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG  228 (310)
T ss_dssp             HHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHH-HHC-------------CBCEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHH-HHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcC
Confidence            99886    358999999999999863211 11233334433 446666665554  6 889999999999999999874


Q ss_pred             hccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCC-Cc-cCHHHH
Q 020880          233 LSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI-DP-VTYKDG  310 (320)
Q Consensus       233 ~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~-~~-~~~~~~  310 (320)
                      .      +++||+++++.+|+.|+++.+.+.+|.+ .+. ..+.+. ...........+|++|+++ ||| +| ++++++
T Consensus       229 ~------~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~-lG~~~~~~~l~~~  298 (310)
T 1eq2_A          229 V------SGIFNLGTGRAESFQAVADATLAYHKKG-QIE-YIPFPD-KLKGRYQAFTQADLTNLRA-AGYDKPFKTVAEG  298 (310)
T ss_dssp             C------CEEEEESCSCCBCHHHHHHHC------------------------CCCSCCBCCHHHHH-TTCCCCCCCHHHH
T ss_pred             C------CCeEEEeCCCccCHHHHHHHHHHHcCCC-Cce-eCCCCh-hhhcccccccccchHHHHh-cCCCCCCCCHHHH
Confidence            3      4599999999999999999999999876 211 111111 0011123456789999976 899 67 899999


Q ss_pred             HHHHHhhhcC
Q 020880          311 VKLTLAAEAT  320 (320)
Q Consensus       311 l~~~i~~~~~  320 (320)
                      |+++++|+++
T Consensus       299 l~~~~~~~~~  308 (310)
T 1eq2_A          299 VTEYMAWLNR  308 (310)
T ss_dssp             HHHHHHHTC-
T ss_pred             HHHHHHHHHh
Confidence            9999999874

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=6.2e-43  Score=332.88  Aligned_cols=306  Identities=22%  Similarity=0.269  Sum_probs=234.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhh----hhhhCCCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL----LLDALPHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~----~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      ++|+|||||||||||++|+++|+++|   ++|++++|+......    +......++.++.+|++|++++.++++.. ++
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~~   85 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENG---YDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-KI   85 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-CC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-CC
Confidence            36899999999999999999999999   899999987654221    11111346788999999999999888765 79


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-----CCCcccCCCCCcchHH
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-----SFYKEEDEIAPVNVYG  152 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-----~~~~E~~~~~p~~~Y~  152 (320)
                      |+|||+||.........++...+++|+.++. +++++|++.++++||++||.++|+...     .+++|+++..|.+.|+
T Consensus        86 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~-~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~  164 (699)
T 1z45_A           86 DSVIHFAGLKAVGESTQIPLRYYHNNILGTV-VLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYG  164 (699)
T ss_dssp             CEEEECCSCCCHHHHHHSHHHHHHHHHHHHH-HHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHH
T ss_pred             CEEEECCcccCcCccccCHHHHHHHHHHHHH-HHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHH
Confidence            9999999986544344567788999999996 999999999999999999999998643     4688999888999999


Q ss_pred             HHHHHHHHHHHHH------cCCeeEEeecccccCCCCCCC-------CCCChHHHHHHHHh-cCCceEeec--------C
Q 020880          153 KSKVAAEKFIYEK------CSNFAILRSSIIYGPQTISPV-------PKSLPIQWIDSVLS-KGEKVEFFH--------D  210 (320)
Q Consensus       153 ~sK~~~e~~~~~~------~~~~~ilR~~~v~G~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~--------~  210 (320)
                      .+|.++|++++.+      +.+++++||+++||++.....       ...+. .++..... .+.++.+++        +
T Consensus       165 ~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~g~  243 (699)
T 1z45_A          165 HTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLL-PYMAQVAVGRREKLYIFGDDYDSRDGT  243 (699)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHH-HHHHHHHTTSSSCCCCC------CCSS
T ss_pred             HHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHH-HHHHHHHhcCCCceEEeCCcccCCCCC
Confidence            9999999988764      567899999999998643211       11222 33433332 234555543        4


Q ss_pred             cccCceeHHHHHHHHHHHHhhhhc--cccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCc
Q 020880          211 ECRCPVYVRDVVKIILALTNRWLS--EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPAD  288 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~~~~--~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (320)
                      ..++|||++|+|++++.+++....  .....+++||+++++.+|+.|+++.+.+.+|.+.++. ..+     ........
T Consensus       244 ~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~-~~~-----~~~~~~~~  317 (699)
T 1z45_A          244 PIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYK-VTG-----RRAGDVLN  317 (699)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------------CCC
T ss_pred             eeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCce-ecC-----CCCCcccc
Confidence            689999999999999999986421  0112245999999999999999999999999875432 111     11123456


Q ss_pred             cccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          289 ISMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       289 ~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      ..+|++|++++|||+| ++++++|+++++|++
T Consensus       318 ~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~  349 (699)
T 1z45_A          318 LTAKPDRAKRELKWQTELQVEDSCKDLWKWTT  349 (699)
T ss_dssp             CCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence            7899999999999999 999999999999985

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=7.8e-43  Score=305.45  Aligned_cols=307  Identities=14%  Similarity=0.139  Sum_probs=229.1

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCC----CceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGK----PYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~----v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      |++|+|||||||||||++|+++|+++|+.    +++|++++|+.+....   ....++.++.+|++|++++.++++  .+
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~--~~   86 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---GFSGAVDARAADLSAPGEAEKLVE--AR   86 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---TCCSEEEEEECCTTSTTHHHHHHH--TC
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---ccCCceeEEEcCCCCHHHHHHHHh--cC
Confidence            45789999999999999999999999820    0378888887654321   123467889999999999988875  38


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-----CceEEEeechhhhccc-CCCCcccCCCCCcch
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-----ENLLIHLSTDQVYEGV-KSFYKEEDEIAPVNV  150 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-----~~~~v~~Ss~~vy~~~-~~~~~E~~~~~p~~~  150 (320)
                      +|+|||+||.... .+..+++..+++|+.++. +++++|.+.+     +++||++||.++|+.. ..+++|+++..|.++
T Consensus        87 ~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~-~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~  164 (342)
T 2hrz_A           87 PDVIFHLAAIVSG-EAELDFDKGYRINLDGTR-YLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTS  164 (342)
T ss_dssp             CSEEEECCCCCHH-HHHHCHHHHHHHHTHHHH-HHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSH
T ss_pred             CCEEEECCccCcc-cccccHHHHHHHHHHHHH-HHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcch
Confidence            9999999997532 234577888999999996 9999998876     7899999999999975 458999999999999


Q ss_pred             HHHHHHHHHHHHHHHc----CCeeEEeeccccc-CCCCCCCCCCChHHHHHHHHhcCCceEeec--CcccCceeHHHHHH
Q 020880          151 YGKSKVAAEKFIYEKC----SNFAILRSSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRDVVK  223 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~~----~~~~ilR~~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~a~  223 (320)
                      |+.+|..+|.+++++.    .+.+++|++.+|| |+........++..++.... .+.+..+++  +..++++|++|+|+
T Consensus       165 Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~Dva~  243 (342)
T 2hrz_A          165 YGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPL-VGQEAVLPVPESIRHWHASPRSAVG  243 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHH-TTCCEEECSCTTCEEEEECHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHh-cCCCeeccCCCccceeeEehHHHHH
Confidence            9999999999988763    4678999999999 65422211223333444433 566555543  34667899999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCC-ccccCCccccCCCCCCCCccccChHHHHhhcCC
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTS-LIKPVSASSVDRGVQSPADISMDITKLVQTLNI  302 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~  302 (320)
                      +++.+++.+... ...+++||++ ++.+|+.|+++.+.+.+|.+.. .+...+...... ........+|++|+++ |||
T Consensus       244 ~~~~~~~~~~~~-~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k~~~-lG~  319 (342)
T 2hrz_A          244 FLIHGAMIDVEK-VGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMR-MCEGWAPGFEAKRARE-LGF  319 (342)
T ss_dssp             HHHHHHHSCHHH-HCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHH-HHTTSCCCBCCHHHHH-TTC
T ss_pred             HHHHHHhccccc-cCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhh-hhcccccccChHHHHH-cCC
Confidence            999999874320 0124599995 5779999999999999987642 111112110000 0011224689999998 999


Q ss_pred             Cc-cCHHHHHHHHHhhhc
Q 020880          303 DP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       303 ~~-~~~~~~l~~~i~~~~  319 (320)
                      +| ++++++|+++++|+.
T Consensus       320 ~p~~~l~e~l~~~~~~~~  337 (342)
T 2hrz_A          320 TAESSFEEIIQVHIEDEL  337 (342)
T ss_dssp             CCCSSHHHHHHHHHHHHS
T ss_pred             CCCCCHHHHHHHHHHHhc
Confidence            99 899999999999985

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=7.9e-42  Score=322.87  Aligned_cols=305  Identities=19%  Similarity=0.296  Sum_probs=236.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCccc-HHHHHHHhCCCCE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG-FDAVALKFGQPDV   79 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~~~~d~   79 (320)
                      ++|+|||||||||||++|+++|+++ |   ++|++++|+.+....+..  ..+++++.+|++|+++ +.++++   ++|+
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g---~~V~~~~r~~~~~~~~~~--~~~v~~v~~Dl~d~~~~~~~~~~---~~D~  385 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDH---YEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVK---KCDV  385 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSS---EEEEEEESCCTTTGGGTT--CTTEEEEECCTTTCHHHHHHHHH---HCSE
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCC---CEEEEEEcCchhhhhhcc--CCceEEEECCCCCcHHHHHHhhc---CCCE
Confidence            4689999999999999999999998 8   899999998766544322  2468889999999875 666776   7999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCC-------CCcchH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEI-------APVNVY  151 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~-------~p~~~Y  151 (320)
                      |||+||...+.....+++..+++|+.++. +++++|.+.+ ++|||+||.++|+.... +++|+++.       .|.+.|
T Consensus       386 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~-~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y  463 (660)
T 1z7e_A          386 VLPLVAIATPIEYTRNPLRVFELDFEENL-RIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIY  463 (660)
T ss_dssp             EEECCCCCCTHHHHHSHHHHHHHHTHHHH-HHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHH
T ss_pred             EEECceecCccccccCHHHHHHhhhHHHH-HHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCc
Confidence            99999987654445577889999999996 9999999988 89999999999986543 68888752       466789


Q ss_pred             HHHHHHHHHHHHH----HcCCeeEEeecccccCCCCCC-----CCCCChHHHHHHHHhcCCceEeec--CcccCceeHHH
Q 020880          152 GKSKVAAEKFIYE----KCSNFAILRSSIIYGPQTISP-----VPKSLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRD  220 (320)
Q Consensus       152 ~~sK~~~e~~~~~----~~~~~~ilR~~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D  220 (320)
                      +.+|..+|.+++.    .+.+++++||+.||||+....     .....+..++.... .+.++.+++  +..++|+|++|
T Consensus       464 ~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~g~g~~~~~~i~v~D  542 (660)
T 1z7e_A          464 SVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLV-EGSPIKLIDGGKQKRCFTDIRD  542 (660)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHH-HTCCEEEEGGGCCEEECEEHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHH-cCCCcEEeCCCCeEEEEEEHHH
Confidence            9999999998865    367899999999999986320     11233444554444 567776665  46899999999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCC-CcCHHHHHHHHHHHhCCCCCccccCCccc----------cCCCCCCCCcc
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPD-RVSRVQMAEVVAEIRGYSTSLIKPVSASS----------VDRGVQSPADI  289 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~  289 (320)
                      +|++++.+++++..  ...+++||+++++ .+|+.|+++.+.+.+|.+.... ..+...          ...........
T Consensus       543 va~ai~~~l~~~~~--~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~  619 (660)
T 1z7e_A          543 GIEALYRIIENAGN--RCDGEIINIGNPENEASIEELGEMLLASFEKHPLRH-HFPPFAGFRVVESSSYYGKGYQDVEHR  619 (660)
T ss_dssp             HHHHHHHHHHCGGG--TTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGG-GSCCCCCEEEECTHHHHCTTCCCCSCC
T ss_pred             HHHHHHHHHhCccc--cCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCccc-ccCccccccchhccccccccccchhhc
Confidence            99999999987531  1134599999986 8999999999999998754321 111100          00111233557


Q ss_pred             ccChHHHHhhcCCCc-cCHHHHHHHHHhhhcC
Q 020880          290 SMDITKLVQTLNIDP-VTYKDGVKLTLAAEAT  320 (320)
Q Consensus       290 ~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~~  320 (320)
                      .+|++|++++|||+| ++++++|+++++|+++
T Consensus       620 ~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~  651 (660)
T 1z7e_A          620 KPSIRNAHRCLDWEPKIDMQETIDETLDFFLR  651 (660)
T ss_dssp             CBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHT
T ss_pred             ccCHHHHHHhcCCCccCcHHHHHHHHHHHHHh
Confidence            889999999999999 8999999999999863

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=2.2e-42  Score=299.46  Aligned_cols=294  Identities=15%  Similarity=0.151  Sum_probs=224.9

Q ss_pred             EEEEEcCCChhhHHHHHHHhhc--cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEI--EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~--g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|||||||||||++|+++|+++  |   ++|++++|+.+...        ++.++.+|++|++++.++++.. ++|+|||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~--------~~~~~~~D~~d~~~~~~~~~~~-~~d~vih   68 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGK---KNVIASDIVQRDTG--------GIKFITLDVSNRDEIDRAVEKY-SIDAIFH   68 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCG---GGEEEEESSCCCCT--------TCCEEECCTTCHHHHHHHHHHT-TCCEEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCC---CEEEEecCCCcccc--------CceEEEecCCCHHHHHHHHhhc-CCcEEEE
Confidence            5999999999999999999998  8   88999988755431        3567899999999999888754 8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC--CCCcccCCCCCcchHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAAEK  160 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~--~~~~E~~~~~p~~~Y~~sK~~~e~  160 (320)
                      +|+.... .+..+++..+++|+.++. +++++|++.++++|||+||.++|+...  .+.+|+++..|.++|+.+|..+|.
T Consensus        69 ~a~~~~~-~~~~~~~~~~~~n~~~~~-~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~  146 (317)
T 3ajr_A           69 LAGILSA-KGEKDPALAYKVNMNGTY-NILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAEL  146 (317)
T ss_dssp             CCCCCHH-HHHHCHHHHHHHHHHHHH-HHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHH
T ss_pred             CCcccCC-ccccChHHHhhhhhHHHH-HHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHH
Confidence            9997543 234567888999999996 999999999999999999999998643  367888888999999999999999


Q ss_pred             HHHHH----cCCeeEEeecccccCCCCCCC-CCCChHHHHHHHHhcCCceEee--cCcccCceeHHHHHHHHHHHHhhhh
Q 020880          161 FIYEK----CSNFAILRSSIIYGPQTISPV-PKSLPIQWIDSVLSKGEKVEFF--HDECRCPVYVRDVVKIILALTNRWL  233 (320)
Q Consensus       161 ~~~~~----~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~  233 (320)
                      +++.+    +.+++++||+.+||+...... ........+...+..+ .+...  ++..++|+|++|+|++++.+++++.
T Consensus       147 ~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  225 (317)
T 3ajr_A          147 LGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKRE-KYKCYLAPNRALPMMYMPDALKALVDLYEADR  225 (317)
T ss_dssp             HHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTC-CEEECSCTTCCEEEEEHHHHHHHHHHHHHCCG
T ss_pred             HHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCC-CceeecCccceeeeeEHHHHHHHHHHHHhCCc
Confidence            87654    678999999999998643211 1122233344444444 34443  3468999999999999999998753


Q ss_pred             ccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHH
Q 020880          234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVK  312 (320)
Q Consensus       234 ~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~  312 (320)
                      ... ..+++||+++ ..+|+.|+++.+.+.++.. .+. ..+.  ............+|++|++++|||+| ++++++|+
T Consensus       226 ~~~-~~g~~~~i~~-~~~s~~e~~~~i~~~~~~~-~i~-~~~~--~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~  299 (317)
T 3ajr_A          226 DKL-VLRNGYNVTA-YTFTPSELYSKIKERIPEF-EIE-YKED--FRDKIAATWPESLDSSEASNEWGFSIEYDLDRTID  299 (317)
T ss_dssp             GGC-SSCSCEECCS-EEECHHHHHHHHHTTCCSC-CEE-ECCC--HHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHHHHH
T ss_pred             ccc-ccCceEecCC-ccccHHHHHHHHHHHCCcc-ccc-cccc--cchhhccccccccCHHHHHHHcCCCCCCCHHHHHH
Confidence            210 1235999986 5799999999999988732 111 1111  00000112345789999999999999 89999999


Q ss_pred             HHHhhhc
Q 020880          313 LTLAAEA  319 (320)
Q Consensus       313 ~~i~~~~  319 (320)
                      ++++|++
T Consensus       300 ~~~~~~~  306 (317)
T 3ajr_A          300 DMIDHIS  306 (317)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999985

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=1.5e-42  Score=303.60  Aligned_cols=295  Identities=17%  Similarity=0.138  Sum_probs=222.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh----CCCcceEE-EeeCCCcccHHHHHHHhCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA----LPHSFVFF-DVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~----~~~~~~~~-~~Dl~d~~~~~~~~~~~~~   76 (320)
                      ++|+|||||||||||++++++|+++|   ++|++++|+.++...+...    .+.+++++ .+|++|++++.++++   +
T Consensus        10 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~   83 (342)
T 1y1p_A           10 EGSLVLVTGANGFVASHVVEQLLEHG---YKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK---G   83 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT---T
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc---C
Confidence            46899999999999999999999999   8999999986554333221    12467777 799999998888776   8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhh-ccCceEEEeechhhhcccC-----CCCcccC-------
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE-NKENLLIHLSTDQVYEGVK-----SFYKEED-------  143 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~-~~~~~~v~~Ss~~vy~~~~-----~~~~E~~-------  143 (320)
                      +|+|||+|+.....   .++...+++|+.++. +++++|.+ .++++|||+||.++|+...     .+++|++       
T Consensus        84 ~d~vih~A~~~~~~---~~~~~~~~~n~~g~~-~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  159 (342)
T 1y1p_A           84 AAGVAHIASVVSFS---NKYDEVVTPAIGGTL-NALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESID  159 (342)
T ss_dssp             CSEEEECCCCCSCC---SCHHHHHHHHHHHHH-HHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHH
T ss_pred             CCEEEEeCCCCCCC---CCHHHHHHHHHHHHH-HHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhh
Confidence            99999999976442   367889999999996 99999984 6788999999999986331     4678876       


Q ss_pred             ---------CCCCcchHHHHHHHHHHHHHHH------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEee
Q 020880          144 ---------EIAPVNVYGKSKVAAEKFIYEK------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFF  208 (320)
Q Consensus       144 ---------~~~p~~~Y~~sK~~~e~~~~~~------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (320)
                               +..|.+.|+.+|..+|.+++.+      +.+++++||+.+|||.............++..+. .+.+..+.
T Consensus       160 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  238 (342)
T 1y1p_A          160 KAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLF-NGEVSPAL  238 (342)
T ss_dssp             HHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHH-TTCCCHHH
T ss_pred             hhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHH-cCCCcccc
Confidence                     2346789999999999988775      3457899999999998643221123444554444 56665544


Q ss_pred             cC-cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCC
Q 020880          209 HD-ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPA  287 (320)
Q Consensus       209 ~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (320)
                      ++ +.++|+|++|+|++++.+++++...    +..+ ++++..+|+.|+++.+.+.+|.. .+....+     .  ....
T Consensus       239 ~~~~~~~~v~v~Dva~a~~~~~~~~~~~----g~~~-~~~g~~~s~~e~~~~i~~~~~~~-~~~~~~~-----~--~~~~  305 (342)
T 1y1p_A          239 ALMPPQYYVSAVDIGLLHLGCLVLPQIE----RRRV-YGTAGTFDWNTVLATFRKLYPSK-TFPADFP-----D--QGQD  305 (342)
T ss_dssp             HTCCSEEEEEHHHHHHHHHHHHHCTTCC----SCEE-EECCEEECHHHHHHHHHHHCTTS-CCCCCCC-----C--CCCC
T ss_pred             ccCCcCCEeEHHHHHHHHHHHHcCcccC----CceE-EEeCCCCCHHHHHHHHHHHCCCc-cCCCCCC-----c--cccc
Confidence            44 5789999999999999999864222    2234 34556799999999999999865 2211111     1  1122


Q ss_pred             ccccChHHHHhhcCC---Cc-cCHHHHHHHHHhhhcC
Q 020880          288 DISMDITKLVQTLNI---DP-VTYKDGVKLTLAAEAT  320 (320)
Q Consensus       288 ~~~~d~~k~~~~lg~---~~-~~~~~~l~~~i~~~~~  320 (320)
                      ...+|++|++++|||   .+ ++++++|+++++|+++
T Consensus       306 ~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~~  342 (342)
T 1y1p_A          306 LSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSETA  342 (342)
T ss_dssp             CCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCSCC
T ss_pred             cccCChHHHHHHHhhcccCCcCCHHHHHHHHHHHhhC
Confidence            367899999998887   45 8999999999999874

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=7.7e-41  Score=283.64  Aligned_cols=270  Identities=27%  Similarity=0.411  Sum_probs=219.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|||||||||||++++++|++ |   ++|++++|+++..       . +   +.+|++|++++.++++.. ++|+|||+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g---~~V~~~~r~~~~~-------~-~---~~~Dl~~~~~~~~~~~~~-~~d~vi~~   64 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-R---HEVIKVYNSSEIQ-------G-G---YKLDLTDFPRLEDFIIKK-RPDVIINA   64 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-T---SCEEEEESSSCCT-------T-C---EECCTTSHHHHHHHHHHH-CCSEEEEC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-C---CeEEEecCCCcCC-------C-C---ceeccCCHHHHHHHHHhc-CCCEEEEC
Confidence            4799999999999999999994 8   8899999986431       1 2   789999999999988854 69999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIY  163 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~  163 (320)
                      ||......+..+++..+++|+.++. +++++|.+.+. +|||+||.++|+....+++|+++..|.+.|+.+|..+|.+++
T Consensus        65 a~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~  142 (273)
T 2ggs_A           65 AAMTDVDKCEIEKEKAYKINAEAVR-HIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFAL  142 (273)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHH-HHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHC
T ss_pred             CcccChhhhhhCHHHHHHHhHHHHH-HHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHh
Confidence            9987654445678899999999996 99999998887 999999999998776789999999999999999999999998


Q ss_pred             HHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCcee
Q 020880          164 EKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL  243 (320)
Q Consensus       164 ~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~  243 (320)
                      .  .+++++||+.+||+.       .+. ..+...+..+.++.+.++ .++++|++|+|++++.+++++.      .++|
T Consensus       143 ~--~~~~~iR~~~v~G~~-------~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~~------~g~~  205 (273)
T 2ggs_A          143 Q--DDSLIIRTSGIFRNK-------GFP-IYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELRK------TGII  205 (273)
T ss_dssp             C--TTCEEEEECCCBSSS-------SHH-HHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHTC------CEEE
T ss_pred             C--CCeEEEecccccccc-------HHH-HHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcCc------CCeE
Confidence            8  789999999999832       122 233233446677777777 8899999999999999998742      3389


Q ss_pred             EecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc--cCHHHHH
Q 020880          244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP--VTYKDGV  311 (320)
Q Consensus       244 n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~--~~~~~~l  311 (320)
                      |+++ +.+|++|+++.+.+.+|.+.++..+....  ......+.+..+|++|++++|||+|  +++++++
T Consensus       206 ~i~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~  272 (273)
T 2ggs_A          206 HVAG-ERISRFELALKIKEKFNLPGEVKEVDEVR--GWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV  272 (273)
T ss_dssp             ECCC-CCEEHHHHHHHHHHHTTCCSCEEEESSCT--TCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred             EECC-CcccHHHHHHHHHHHhCCChhhccccccc--ccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence            9999 99999999999999999886543221111  1122345668899999999999999  5888764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=2.4e-40  Score=289.05  Aligned_cols=290  Identities=17%  Similarity=0.176  Sum_probs=207.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhh--hhCC---CcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL--DALP---HSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~--~~~~---~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      +|+|||||||||||++|+++|+++|   ++|+++.|+.+......  ..+.   .+++++.+|++|++++.++++   ++
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~   78 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLERG---YTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK---GC   78 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT---TC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCC---CEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc---CC
Confidence            6899999999999999999999999   89999999876432211  1122   247789999999999988887   89


Q ss_pred             CEEEECCCccCccccccCch-hhhhccccccHHHHHhhhhhcc-CceEEEeechhh-hcccC--CCCcccCCC-------
Q 020880           78 DVVVNCAALSVPRVCENDPD-SAMSINVPSSLVNWLSSFTENK-ENLLIHLSTDQV-YEGVK--SFYKEEDEI-------  145 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~~~l~~~~~~~-~~~~v~~Ss~~v-y~~~~--~~~~E~~~~-------  145 (320)
                      |+|||+|+...  ....++. ..+++|+.++. +++++|.+.+ +++|||+||.++ |+...  .+++|+++.       
T Consensus        79 d~Vih~A~~~~--~~~~~~~~~~~~~nv~gt~-~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~  155 (337)
T 2c29_D           79 TGVFHVATPMD--FESKDPENEVIKPTIEGML-GIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRA  155 (337)
T ss_dssp             SEEEECCCCCC--SSCSSHHHHTHHHHHHHHH-HHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHH
T ss_pred             CEEEEeccccC--CCCCChHHHHHHHHHHHHH-HHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcc
Confidence            99999998652  2223443 57899999996 9999999887 889999999884 54322  256777532       


Q ss_pred             --CCcchHHHHHHHHHHHHHH----HcCCeeEEeecccccCCCCCCCCCCChHHHHHHH--HhcCCceEeecCcccCcee
Q 020880          146 --APVNVYGKSKVAAEKFIYE----KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSV--LSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       146 --~p~~~Y~~sK~~~e~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~  217 (320)
                        .|.++|+.+|.++|.+++.    .+.+++++||++||||......    .. .+...  ...+....+.......|+|
T Consensus       156 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~----~~-~~~~~~~~~~g~~~~~~~~~~~~~i~  230 (337)
T 2c29_D          156 KKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSM----PP-SLITALSPITGNEAHYSIIRQGQFVH  230 (337)
T ss_dssp             HCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSC----CH-HHHHHTHHHHTCGGGHHHHTEEEEEE
T ss_pred             cCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCC----Cc-hHHHHHHHHcCCCccccccCCCCEEE
Confidence              1456899999999998765    4678999999999999863221    11 11111  0123222111112334999


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHH
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV  297 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  297 (320)
                      ++|+|++++.+++++..     .+.|++++ ..+|+.|+++.+.+.++.. .+    +.. ............+|++|+ 
T Consensus       231 v~Dva~a~~~~~~~~~~-----~~~~~~~~-~~~s~~e~~~~i~~~~~~~-~~----~~~-~~~~~~~~~~~~~d~~k~-  297 (337)
T 2c29_D          231 LDDLCNAHIYLFENPKA-----EGRYICSS-HDCIILDLAKMLREKYPEY-NI----PTE-FKGVDENLKSVCFSSKKL-  297 (337)
T ss_dssp             HHHHHHHHHHHHHCTTC-----CEEEEECC-EEEEHHHHHHHHHHHCTTS-CC----CSC-CTTCCTTCCCCEECCHHH-
T ss_pred             HHHHHHHHHHHhcCccc-----CceEEEeC-CCCCHHHHHHHHHHHCCCc-cC----CCC-CCcccCCCccccccHHHH-
Confidence            99999999999876422     23677655 5689999999999987421 11    100 011112334577899999 


Q ss_pred             hhcCCCc-cCHHHHHHHHHhhhc
Q 020880          298 QTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       298 ~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      ++|||+| ++++|+|+++++|++
T Consensus       298 ~~lG~~p~~~l~e~l~~~~~~~~  320 (337)
T 2c29_D          298 TDLGFEFKYSLEDMFTGAVDTCR  320 (337)
T ss_dssp             HHHTCCCCCCHHHHHHHHHHHHH
T ss_pred             HHcCCCcCCCHHHHHHHHHHHHH
Confidence            7799999 899999999999985

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=3.9e-40  Score=290.69  Aligned_cols=297  Identities=14%  Similarity=0.079  Sum_probs=222.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccC--CCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEG--KPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~--~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      +|+|||||||||||++|+++|+++|.  .+++|++++|+.+...  .  ...+++++.+|++|++++.++++...++|+|
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~v   76 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--H--EDNPINYVQCDISDPDDSQAKLSPLTDVTHV   76 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--C--CSSCCEEEECCTTSHHHHHHHHTTCTTCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--c--ccCceEEEEeecCCHHHHHHHHhcCCCCCEE
Confidence            47899999999999999999999881  1147899999866543  1  1246788999999999998888733129999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhc--cCceEE-------Eeechhhhccc---CCCCcccCCCCC-
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLI-------HLSTDQVYEGV---KSFYKEEDEIAP-  147 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v-------~~Ss~~vy~~~---~~~~~E~~~~~p-  147 (320)
                      ||||+...     .+++..+++|+.++. +++++|++.  +++++|       |+||.++||..   ..+++|+++..| 
T Consensus        77 ih~a~~~~-----~~~~~~~~~n~~~~~-~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~  150 (364)
T 2v6g_A           77 FYVTWANR-----STEQENCEANSKMFR-NVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKY  150 (364)
T ss_dssp             EECCCCCC-----SSHHHHHHHHHHHHH-HHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSS
T ss_pred             EECCCCCc-----chHHHHHHHhHHHHH-HHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCcc
Confidence            99999752     357888999999996 999999988  788998       89999999975   247899988765 


Q ss_pred             cchHHHHHHHHHHHHHHH----c-CCeeEEeecccccCCCCCCCCCCChHHHHHHHH--hcCCceEeecC-----cccCc
Q 020880          148 VNVYGKSKVAAEKFIYEK----C-SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVL--SKGEKVEFFHD-----ECRCP  215 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~----~-~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~~  215 (320)
                      .+.|.    .+|++++++    + .+++++||+.||||+.... ...+...++...+  ..+.++.++++     ...++
T Consensus       151 ~~~y~----~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~  225 (364)
T 2v6g_A          151 MNFYY----DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSM-MNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDC  225 (364)
T ss_dssp             CCHHH----HHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCS-SCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCC
T ss_pred             chhhH----HHHHHHHHHhhcCCCceEEEECCCceeCCCCCcc-cchHHHHHHHHHHHHhcCCceecCCCcccccccCCC
Confidence            66783    467766654    3 6889999999999987421 1222222233333  35667666664     34778


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCcc-ccCCccc----------------
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLI-KPVSASS----------------  278 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~-~~~~~~~----------------  278 (320)
                      +|++|+|++++.+++++..    .+++||+++++.+|+.|+++.+.+.+|.+.... ...|...                
T Consensus       226 ~~v~Dva~a~~~~~~~~~~----~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  301 (364)
T 2v6g_A          226 SDADLIAEHHIWAAVDPYA----KNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVR  301 (364)
T ss_dssp             EEHHHHHHHHHHHHHCGGG----TTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHhCCCC----CCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHH
Confidence            8999999999999987532    245999999999999999999999999875432 1222110                


Q ss_pred             -cCCCCC---C-----------CCc-cccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          279 -VDRGVQ---S-----------PAD-ISMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       279 -~~~~~~---~-----------~~~-~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                       ......   .           ... ..+|++|+++ |||+| ++++++|+++++|++
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~l~~~~~~~~  358 (364)
T 2v6g_A          302 ENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKNAFISWIDKAK  358 (364)
T ss_dssp             HTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHH
T ss_pred             HhCCCccccccccccchhhhccccchhhcchHHHHh-cCCCCCCCHHHHHHHHHHHHH
Confidence             000000   0           034 5899999988 99999 999999999999986

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=1.7e-40  Score=290.07  Aligned_cols=291  Identities=18%  Similarity=0.150  Sum_probs=202.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhh--hhh--CCCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL--LDA--LPHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~--~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      +|+|||||||||||++|+++|+++|   ++|+++.|+.+.....  ...  ...+++++.+|++|++++.++++   ++|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~D   82 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKG---YAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA---GCD   82 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTT---CEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT---TCS
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCC---CEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc---CCC
Confidence            5789999999999999999999999   8899888876542211  011  12357789999999999988887   899


Q ss_pred             EEEECCCccCccccccCch-hhhhccccccHHHHHhhhhhcc-CceEEEeechh-hhccc--C--CCCcccCCC------
Q 020880           79 VVVNCAALSVPRVCENDPD-SAMSINVPSSLVNWLSSFTENK-ENLLIHLSTDQ-VYEGV--K--SFYKEEDEI------  145 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~~~l~~~~~~~-~~~~v~~Ss~~-vy~~~--~--~~~~E~~~~------  145 (320)
                      +|||+|+....  ...++. ..+++|+.++. +++++|.+.+ +++|||+||.+ +|+..  .  .+++|+++.      
T Consensus        83 ~Vih~A~~~~~--~~~~~~~~~~~~nv~gt~-~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  159 (338)
T 2rh8_A           83 FVFHVATPVHF--ASEDPENDMIKPAIQGVV-NVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLT  159 (338)
T ss_dssp             EEEEESSCCCC-----------CHHHHHHHH-HHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC----
T ss_pred             EEEEeCCccCC--CCCCcHHHHHHHHHHHHH-HHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhcc
Confidence            99999987532  223343 48899999996 9999999885 89999999987 44421  1  267887632      


Q ss_pred             --CC-cchHHHHHHHHHHHHHH----HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEee-------cCc
Q 020880          146 --AP-VNVYGKSKVAAEKFIYE----KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFF-------HDE  211 (320)
Q Consensus       146 --~p-~~~Y~~sK~~~e~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~  211 (320)
                        +| .+.|+.+|..+|.+++.    .+.+++++||++||||........ .. ..+.... .+....+.       +.+
T Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~-~~-~~~~~~~-~g~~~~~~~~~~~~~~~~  236 (338)
T 2rh8_A          160 SAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPS-SI-GLAMSLI-TGNEFLINGMKGMQMLSG  236 (338)
T ss_dssp             ---CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCH-HH-HHHHHHH-HTCHHHHHHHHHHHHHHS
T ss_pred             ccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCc-hH-HHHHHHH-cCCccccccccccccccC
Confidence              11 22699999999998765    367899999999999986432111 11 1111112 23322111       012


Q ss_pred             ccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCcccc
Q 020880          212 CRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM  291 (320)
Q Consensus       212 ~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (320)
                      .++|+|++|+|++++.+++++..     .+.||+++ ..+|+.|+++.+.+.++... +    +.. ..... ......+
T Consensus       237 ~~~~i~v~Dva~a~~~~~~~~~~-----~~~~~~~~-~~~s~~e~~~~l~~~~~~~~-~----~~~-~~~~~-~~~~~~~  303 (338)
T 2rh8_A          237 SVSIAHVEDVCRAHIFVAEKESA-----SGRYICCA-ANTSVPELAKFLSKRYPQYK-V----PTD-FGDFP-PKSKLII  303 (338)
T ss_dssp             SEEEEEHHHHHHHHHHHHHCTTC-----CEEEEECS-EEECHHHHHHHHHHHCTTSC-C----CCC-CTTSC-SSCSCCC
T ss_pred             cccEEEHHHHHHHHHHHHcCCCc-----CCcEEEec-CCCCHHHHHHHHHHhCCCCC-C----CCC-CCCCC-cCcceee
Confidence            34799999999999999876432     23688865 46999999999998875211 1    100 00001 1123788


Q ss_pred             ChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          292 DITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       292 d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      |++|+ ++|||+| ++++|+|+++++|++
T Consensus       304 d~~k~-~~lG~~p~~~l~~gl~~~~~~~~  331 (338)
T 2rh8_A          304 SSEKL-VKEGFSFKYGIEEIYDESVEYFK  331 (338)
T ss_dssp             CCHHH-HHHTCCCSCCHHHHHHHHHHHHH
T ss_pred             chHHH-HHhCCCCCCCHHHHHHHHHHHHH
Confidence            99999 6699999 899999999999985

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.9e-40  Score=282.19  Aligned_cols=277  Identities=14%  Similarity=0.094  Sum_probs=202.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |||||||||||||++|+++|+++|   ++|++++|++.+.         .   +..|..+       .+.+.++|+|||+
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G---~~V~~l~R~~~~~---------~---~~~~~~~-------~~~l~~~d~vihl   58 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARG---HEVTLVSRKPGPG---------R---ITWDELA-------ASGLPSCDAAVNL   58 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCTT---------E---EEHHHHH-------HHCCCSCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCcC---------e---eecchhh-------HhhccCCCEEEEe
Confidence            679999999999999999999999   8999999986432         1   3333111       1223589999999


Q ss_pred             CCccCcc----ccccCchhhhhccccccHHHHHhhhhhccCc--eEEEeechhhhcccCC-CCcccCCCCCcchHHHHHH
Q 020880           84 AALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTENKEN--LLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKV  156 (320)
Q Consensus        84 a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~--~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~  156 (320)
                      |+.....    ++.......++.|+.++. ++++++++.+.+  ++|++||+++||+... +.+|+++..|.+.|+..|.
T Consensus        59 a~~~i~~~~~~~~~~~~~~~~~~~v~~t~-~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~  137 (298)
T 4b4o_A           59 AGENILNPLRRWNETFQKEVLGSRLETTQ-LLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVT  137 (298)
T ss_dssp             CCCCSSCTTSCCCHHHHHHHHHHHHHHHH-HHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHH
T ss_pred             ccCcccchhhhhhhhhhhhhhhHHHHHHH-HHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHH
Confidence            9864221    222334567888999984 999988877653  5899999999997655 8899999999999999888


Q ss_pred             HHHHHHHH--HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEe-ecCcccCceeHHHHHHHHHHHHhhhh
Q 020880          157 AAEKFIYE--KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEF-FHDECRCPVYVRDVVKIILALTNRWL  233 (320)
Q Consensus       157 ~~e~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~  233 (320)
                      ..|.....  .+.+++++||+.||||+..      .. ..+......+....+ .|++.++|||++|+|+++..+++++.
T Consensus       138 ~~e~~~~~~~~~~~~~~~r~~~v~g~~~~------~~-~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~  210 (298)
T 4b4o_A          138 KWEAAARLPGDSTRQVVVRSGVVLGRGGG------AM-GHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANH  210 (298)
T ss_dssp             HHHHHHCCSSSSSEEEEEEECEEECTTSH------HH-HHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHhhccCCceeeeeeeeEEcCCCC------ch-hHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCC
Confidence            88875432  3457899999999999752      12 222233333443333 23468999999999999999999854


Q ss_pred             ccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCC------CCCccccChHHHHhhcCCCc-c-
Q 020880          234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQ------SPADISMDITKLVQTLNIDP-V-  305 (320)
Q Consensus       234 ~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~d~~k~~~~lg~~~-~-  305 (320)
                      .     .++||+++++++|++|+++.+++.+|++..+  ++|.........      ......++++|++ ++||++ + 
T Consensus       211 ~-----~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~--pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~-~~Gf~f~yp  282 (298)
T 4b4o_A          211 V-----HGVLNGVAPSSATNAEFAQTFGAALGRRAFI--PLPSAVVQAVFGRQRAIMLLEGQKVIPRRTL-ATGYQYSFP  282 (298)
T ss_dssp             C-----CEEEEESCSCCCBHHHHHHHHHHHHTCCCCC--CBCHHHHHHHHCHHHHHHHHCCCCBCCHHHH-HTTCCCSCC
T ss_pred             C-----CCeEEEECCCccCHHHHHHHHHHHhCcCCcc--cCCHHHHHHHhcchhHHHhhCCCEEcHHHHH-HCCCCCCCC
Confidence            3     3499999999999999999999999987543  333321111000      0123567889995 589999 4 


Q ss_pred             CHHHHHHHHHhhh
Q 020880          306 TYKDGVKLTLAAE  318 (320)
Q Consensus       306 ~~~~~l~~~i~~~  318 (320)
                      +++++|+++++.+
T Consensus       283 ~l~~al~~l~~~l  295 (298)
T 4b4o_A          283 ELGAALKEIAENL  295 (298)
T ss_dssp             SHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHhh
Confidence            7999999999864

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=3.4e-39  Score=279.95  Aligned_cols=290  Identities=21%  Similarity=0.202  Sum_probs=201.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC-CCCC---hhhhhhhCC---CcceEEEeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPL---PQLLLDALP---HSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r-~~~~---~~~~~~~~~---~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      +|+|||||||||||++++++|+++|   ++|+++.| +++.   ...+ ..+.   .+++++.+|++|++++.++++   
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENG---YSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE---   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT---
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCC---CEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc---
Confidence            4789999999999999999999999   89998888 5422   2111 1111   246778899999999998887   


Q ss_pred             CCCEEEECCCccCccccccCc-hhhhhccccccHHHHHhhhhhc-cCceEEEeechhhh-ccc--CCCCcccCCC-----
Q 020880           76 QPDVVVNCAALSVPRVCENDP-DSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTDQVY-EGV--KSFYKEEDEI-----  145 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~-~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~~vy-~~~--~~~~~E~~~~-----  145 (320)
                      ++|+|||+|+..  .....++ ...+++|+.++. +++++|.+. ++++|||+||.+++ +..  ..+++|+++.     
T Consensus        74 ~~d~vih~A~~~--~~~~~~~~~~~~~~nv~gt~-~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  150 (322)
T 2p4h_X           74 GCVGIFHTASPI--DFAVSEPEEIVTKRTVDGAL-GILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLL  150 (322)
T ss_dssp             TCSEEEECCCCC----------CHHHHHHHHHHH-HHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHH
T ss_pred             CCCEEEEcCCcc--cCCCCChHHHHHHHHHHHHH-HHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhh
Confidence            899999999754  2223333 458899999996 999999987 78899999998854 322  2356777542     


Q ss_pred             ---CCcc-hHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          146 ---APVN-VYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       146 ---~p~~-~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                         .|.. .|+.||.++|.+++++    +.+++++||++||||........ .. ..+.... .+....+.. ..++|+|
T Consensus       151 ~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~-~~-~~~~~~~-~g~~~~~~~-~~~~~i~  226 (322)
T 2p4h_X          151 RSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPD-SI-EKALVLV-LGKKEQIGV-TRFHMVH  226 (322)
T ss_dssp             HHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCH-HH-HHHTHHH-HSCGGGCCE-EEEEEEE
T ss_pred             cccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCc-hH-HHHHHHH-hCCCccCcC-CCcCEEE
Confidence               2333 6999999999987654    57899999999999975322111 11 1111112 233322222 3348999


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccc-cCCCCCCCCccccChHHH
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASS-VDRGVQSPADISMDITKL  296 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~k~  296 (320)
                      ++|+|++++.+++++..     .+.|| ++++.+|+.|+++.+.+.++.. ++    +... ..... ......+|++|+
T Consensus       227 v~Dva~a~~~~~~~~~~-----~g~~~-~~~~~~s~~e~~~~i~~~~~~~-~~----~~~~~~~~~~-~~~~~~~d~~k~  294 (322)
T 2p4h_X          227 VDDVARAHIYLLENSVP-----GGRYN-CSPFIVPIEEMSQLLSAKYPEY-QI----LTVDELKEIK-GARLPDLNTKKL  294 (322)
T ss_dssp             HHHHHHHHHHHHHSCCC-----CEEEE-CCCEEEEHHHHHHHHHHHCTTS-CC----CCTTTTTTCC-CEECCEECCHHH
T ss_pred             HHHHHHHHHHHhhCcCC-----CCCEE-EcCCCCCHHHHHHHHHHhCCCC-CC----CCCccccCCC-CCcceecccHHH
Confidence            99999999999876321     22588 5667899999999999876421 11    1100 00000 113577899999


Q ss_pred             HhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          297 VQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       297 ~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                       ++|||+| ++++++|+++++|++
T Consensus       295 -~~lG~~p~~~~~~~l~~~~~~~~  317 (322)
T 2p4h_X          295 -VDAGFDFKYTIEDMFDDAIQCCK  317 (322)
T ss_dssp             -HHTTCCCCCCHHHHHHHHHHHHH
T ss_pred             -HHhCCccCCCHHHHHHHHHHHHH
Confidence             6699999 799999999999985

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=3.3e-38  Score=269.38  Aligned_cols=266  Identities=15%  Similarity=0.097  Sum_probs=205.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhc--cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEI--EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~--g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      |+|||||||||||++++++|+++  |   ++|++++|++++...+..   .+++++.+|++|++++.++++   ++|+||
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~d~~~l~~~~~---~~d~vi   71 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPA---SQIIAIVRNVEKASTLAD---QGVEVRHGDYNQPESLQKAFA---GVSKLL   71 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCG---GGEEEEESCTTTTHHHHH---TTCEEEECCTTCHHHHHHHTT---TCSEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCC---CeEEEEEcCHHHHhHHhh---cCCeEEEeccCCHHHHHHHHh---cCCEEE
Confidence            57999999999999999999998  8   899999998766554432   357889999999998888876   899999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHH
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKF  161 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~  161 (320)
                      |+|+.. .       ..  ++|+.++. +++++|++.++++|||+||.++|..             ..+|+.+|..+|++
T Consensus        72 ~~a~~~-~-------~~--~~n~~~~~-~l~~a~~~~~~~~~v~~Ss~~~~~~-------------~~~y~~~K~~~E~~  127 (287)
T 2jl1_A           72 FISGPH-Y-------DN--TLLIVQHA-NVVKAARDAGVKHIAYTGYAFAEES-------------IIPLAHVHLATEYA  127 (287)
T ss_dssp             ECCCCC-S-------CH--HHHHHHHH-HHHHHHHHTTCSEEEEEEETTGGGC-------------CSTHHHHHHHHHHH
T ss_pred             EcCCCC-c-------Cc--hHHHHHHH-HHHHHHHHcCCCEEEEECCCCCCCC-------------CCchHHHHHHHHHH
Confidence            999852 1       11  56888885 9999999999999999999988631             23799999999999


Q ss_pred             HHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCc
Q 020880          162 IYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL  241 (320)
Q Consensus       162 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  241 (320)
                      +++.+.+++++||+.++|+...     .    ++...+..+......+++.++|+|++|+|++++.+++++..    .++
T Consensus       128 ~~~~~~~~~ilrp~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~----~g~  194 (287)
T 2jl1_A          128 IRTTNIPYTFLRNALYTDFFVN-----E----GLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGH----ENK  194 (287)
T ss_dssp             HHHTTCCEEEEEECCBHHHHSS-----G----GGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSC----TTE
T ss_pred             HHHcCCCeEEEECCEeccccch-----h----hHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCCC----CCc
Confidence            9998999999999998886411     1    12233333443333356788999999999999999987422    345


Q ss_pred             eeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccC-----CCCC--------------CCCccccChHHHHhhcCC
Q 020880          242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD-----RGVQ--------------SPADISMDITKLVQTLNI  302 (320)
Q Consensus       242 ~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~-----~~~~--------------~~~~~~~d~~k~~~~lg~  302 (320)
                      +||+++++.+|+.|+++.+.+.+|.+.++. ..+.....     ....              .......|++|++++|| 
T Consensus       195 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG-  272 (287)
T 2jl1_A          195 TYNLVSNQPWTFDELAQILSEVSGKKVVHQ-PVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG-  272 (287)
T ss_dssp             EEEECCSSCBCHHHHHHHHHHHHSSCCEEE-ECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS-
T ss_pred             EEEecCCCcCCHHHHHHHHHHHHCCcceEE-eCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC-
Confidence            999999999999999999999999875532 22221110     0000              01345678999999999 


Q ss_pred             CccCHHHHHHHHHhh
Q 020880          303 DPVTYKDGVKLTLAA  317 (320)
Q Consensus       303 ~~~~~~~~l~~~i~~  317 (320)
                      ++++++|+|++++++
T Consensus       273 ~~~~l~e~l~~~~~~  287 (287)
T 2jl1_A          273 SLTPLKETVKQALKM  287 (287)
T ss_dssp             SCCCHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHhcC
Confidence            559999999998863

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.6e-38  Score=290.57  Aligned_cols=280  Identities=15%  Similarity=0.089  Sum_probs=201.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||+|||||||||||++|++.|+++|   ++|++++|+.++..           .+.+|+.+.  +.+.++   ++|+|||
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G---~~V~~l~R~~~~~~-----------~v~~d~~~~--~~~~l~---~~D~Vih  207 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGG---HEVIQLVRKEPKPG-----------KRFWDPLNP--ASDLLD---GADVLVH  207 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESSSCCTT-----------CEECCTTSC--CTTTTT---TCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCCcc-----------ceeecccch--hHHhcC---CCCEEEE
Confidence            6899999999999999999999999   89999999876531           267888753  333443   8999999


Q ss_pred             CCCccCc-cccccCchhhhhccccccHHHHHhh-hhhccCceEEEeechhhhc-cc-CCCCcccCCCCCcchHHHHHHHH
Q 020880           83 CAALSVP-RVCENDPDSAMSINVPSSLVNWLSS-FTENKENLLIHLSTDQVYE-GV-KSFYKEEDEIAPVNVYGKSKVAA  158 (320)
Q Consensus        83 ~a~~~~~-~~~~~~~~~~~~~n~~~~~~~~l~~-~~~~~~~~~v~~Ss~~vy~-~~-~~~~~E~~~~~p~~~Y~~sK~~~  158 (320)
                      ||+.... .....++...+++|+.++. +++++ +++.++++|||+||+++|| .. ..+++|+++. |.+.|+.+|...
T Consensus       208 ~A~~~~~~~~~~~~~~~~~~~Nv~gt~-~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~~  285 (516)
T 3oh8_A          208 LAGEPIFGRFNDSHKEAIRESRVLPTK-FLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRDW  285 (516)
T ss_dssp             CCCC-----CCGGGHHHHHHHTHHHHH-HHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHHH
T ss_pred             CCCCccccccchhHHHHHHHHHHHHHH-HHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHHH
Confidence            9998644 2334456788999999995 99999 6677889999999999998 33 3378999887 788999999999


Q ss_pred             HHHHH---HHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEe-ecCcccCceeHHHHHHHHHHHHhhhhc
Q 020880          159 EKFIY---EKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEF-FHDECRCPVYVRDVVKIILALTNRWLS  234 (320)
Q Consensus       159 e~~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~  234 (320)
                      |.++.   ..+.+++++||+.||||+..      .+ ..+...+..+....+ .+++.++|||++|+|++++.+++++..
T Consensus       286 E~~~~~~~~~gi~~~ilRp~~v~Gp~~~------~~-~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~  358 (516)
T 3oh8_A          286 EHATAPASDAGKRVAFIRTGVALSGRGG------ML-PLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI  358 (516)
T ss_dssp             HHTTHHHHHTTCEEEEEEECEEEBTTBS------HH-HHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHhCCCCEEEEEeeEEECCCCC------hH-HHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCccc
Confidence            97654   44678999999999999741      22 223333333333322 134689999999999999999987533


Q ss_pred             cccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCC-------CCCccccChHHHHhhcCCCc-cC
Q 020880          235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQ-------SPADISMDITKLVQTLNIDP-VT  306 (320)
Q Consensus       235 ~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~d~~k~~~~lg~~~-~~  306 (320)
                           .++||+++++.+|+.|+++.+.+.+|.+..+  ..|.........       ......++++|++ .|||+| ++
T Consensus       359 -----~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~--~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~-~lG~~~~~~  430 (516)
T 3oh8_A          359 -----SGPINAVAPNPVSNADMTKILATSMHRPAFI--QIPSLGPKILLGSQGAEELALASQRTAPAALE-NLSHTFRYT  430 (516)
T ss_dssp             -----CEEEEESCSCCEEHHHHHHHTTC-----------------------CCGGGGGGCEEEECCHHHH-HTTCCCSCS
T ss_pred             -----CCcEEEECCCCCCHHHHHHHHHHHhCCCCCC--CCCHHHHHHHhCCchhHHHhhcCCeechHHHH-HCCCCCCCC
Confidence                 3489999999999999999999999976532  222221111111       1234567889997 589999 65


Q ss_pred             -HHHHHHHHHhhh
Q 020880          307 -YKDGVKLTLAAE  318 (320)
Q Consensus       307 -~~~~l~~~i~~~  318 (320)
                       ++++|+++++..
T Consensus       431 ~l~e~l~~~l~~~  443 (516)
T 3oh8_A          431 DIGAAIAHELGYE  443 (516)
T ss_dssp             SHHHHHHHHHTCC
T ss_pred             CHHHHHHHHhCcc
Confidence             999999998864

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=1.3e-37  Score=265.61  Aligned_cols=264  Identities=12%  Similarity=0.108  Sum_probs=198.1

Q ss_pred             EEEEEcCCChhhHHHHHHHhhc--cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEI--EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~--g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|||||||||||++++++|+++  |   ++|++++|++++...+..   .+++++.+|++|++++.++++   ++|+|||
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~---~~d~vi~   71 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPA---SQIVAIVRNPAKAQALAA---QGITVRQADYGDEAALTSALQ---GVEKLLL   71 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCG---GGEEEEESCTTTCHHHHH---TTCEEEECCTTCHHHHHHHTT---TCSEEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCC---ceEEEEEcChHhhhhhhc---CCCeEEEcCCCCHHHHHHHHh---CCCEEEE
Confidence            5899999999999999999998  8   899999998776544332   357889999999998888876   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI  162 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  162 (320)
                      +|+.. +           ..|+.++. +++++|++.++++||++||.++|.             ...+|+.+|..+|+++
T Consensus        72 ~a~~~-~-----------~~~~~~~~-~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~~~y~~sK~~~e~~~  125 (286)
T 2zcu_A           72 ISSSE-V-----------GQRAPQHR-NVINAAKAAGVKFIAYTSLLHADT-------------SPLGLADEHIETEKML  125 (286)
T ss_dssp             CC--------------------CHHH-HHHHHHHHHTCCEEEEEEETTTTT-------------CCSTTHHHHHHHHHHH
T ss_pred             eCCCC-c-----------hHHHHHHH-HHHHHHHHcCCCEEEEECCCCCCC-------------CcchhHHHHHHHHHHH
Confidence            99852 1           13677774 999999999999999999998872             1247999999999999


Q ss_pred             HHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEee-cCcccCceeHHHHHHHHHHHHhhhhccccccCc
Q 020880          163 YEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFF-HDECRCPVYVRDVVKIILALTNRWLSEDKQMQL  241 (320)
Q Consensus       163 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  241 (320)
                      ++.+.+++++||+.++++..          .++......+ .+.+. +++.++|+|++|+|++++.++.++..    .++
T Consensus       126 ~~~~~~~~ilrp~~~~~~~~----------~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~----~g~  190 (286)
T 2zcu_A          126 ADSGIVYTLLRNGWYSENYL----------ASAPAALEHG-VFIGAAGDGKIASATRADYAAAAARVISEAGH----EGK  190 (286)
T ss_dssp             HHHCSEEEEEEECCBHHHHH----------TTHHHHHHHT-EEEESCTTCCBCCBCHHHHHHHHHHHHHSSSC----TTC
T ss_pred             HHcCCCeEEEeChHHhhhhH----------HHhHHhhcCC-ceeccCCCCccccccHHHHHHHHHHHhcCCCC----CCc
Confidence            99899999999987766431          1122333333 33332 45789999999999999999987432    345


Q ss_pred             eeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCC-----CCC--------------CCCccccChHHHHhhcCC
Q 020880          242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDR-----GVQ--------------SPADISMDITKLVQTLNI  302 (320)
Q Consensus       242 ~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~--------------~~~~~~~d~~k~~~~lg~  302 (320)
                      +||+++++.+|+.|+++.+.+.+|.+..+. ..+......     ...              .......|++|+++.|||
T Consensus       191 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~  269 (286)
T 2zcu_A          191 VYELAGDSAWTLTQLAAELTKQSGKQVTYQ-NLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGH  269 (286)
T ss_dssp             EEEECCSSCBCHHHHHHHHHHHHSSCCEEE-ECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTS
T ss_pred             eEEEeCCCcCCHHHHHHHHHHHHCCCCcee-eCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCc
Confidence            999999989999999999999999875432 233221100     000              012356789999999998


Q ss_pred             CccCHHHHHHHHHhhhc
Q 020880          303 DPVTYKDGVKLTLAAEA  319 (320)
Q Consensus       303 ~~~~~~~~l~~~i~~~~  319 (320)
                      ++++++|+|+++++|++
T Consensus       270 ~~~~~~e~l~~~~~~~~  286 (286)
T 2zcu_A          270 PTTTLAESVSHLFNVNN  286 (286)
T ss_dssp             CCCCHHHHHHGGGC---
T ss_pred             CCCCHHHHHHHHHhhcC
Confidence            77999999999999975

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=1.1e-37  Score=280.58  Aligned_cols=293  Identities=16%  Similarity=0.110  Sum_probs=212.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh---hhhhh------------hCCCcceEEEeeCCCccc
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP---QLLLD------------ALPHSFVFFDVDLKSGSG   66 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~---~~~~~------------~~~~~~~~~~~Dl~d~~~   66 (320)
                      .+|+|||||||||||++|+++|++.|   ++|++++|+++..   ..+.+            ....++.++.+|++|++.
T Consensus        68 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           68 PLGNTLLTGATGFLGAYLIEALQGYS---HRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCEEEEEECTTSHHHHHHHHHHTTTE---EEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHcCC---CEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            36799999999999999999999999   9999999998732   11111            113578899999999888


Q ss_pred             HHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhccc------CCCCc
Q 020880           67 FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV------KSFYK  140 (320)
Q Consensus        67 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~------~~~~~  140 (320)
                      +.    .+.++|+||||||....   ..++...+++|+.++. +++++|.+ +.++|||+||.++ |..      ..+++
T Consensus       145 l~----~~~~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~-~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~  214 (427)
T 4f6c_A          145 VV----LPENMDTIIHAGARTDH---FGDDDEFEKVNVQGTV-DVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFS  214 (427)
T ss_dssp             CC----CSSCCSEEEECCCCC----------CHHHHHHHHHH-HHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEEC
T ss_pred             CC----CcCCCCEEEECCcccCC---CCCHHHHHHHHHHHHH-HHHHHHHh-cCCcEEEECchHh-CCCccCCCCCcccc
Confidence            87    33599999999998643   2467888999999996 99999998 7789999999999 532      33788


Q ss_pred             ccCC---CCCcchHHHHHHHHHHHHHHH---cCCeeEEeecccccCCCCCCCCC----CChHHHHHHHHhcCCceEee-c
Q 020880          141 EEDE---IAPVNVYGKSKVAAEKFIYEK---CSNFAILRSSIIYGPQTISPVPK----SLPIQWIDSVLSKGEKVEFF-H  209 (320)
Q Consensus       141 E~~~---~~p~~~Y~~sK~~~e~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~  209 (320)
                      |+++   ..|.+.|+.+|..+|.+++++   +.+++++||+.|||+........    ..+..++.... .+..+... +
T Consensus       215 E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  293 (427)
T 4f6c_A          215 EADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLL-QLDCIGVSMA  293 (427)
T ss_dssp             TTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHH-HSSEEEHHHH
T ss_pred             ccccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHH-hcCCCCCccc
Confidence            8887   568899999999999999884   67899999999999987533211    12334444444 34445442 4


Q ss_pred             CcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccC-----CC--
Q 020880          210 DECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD-----RG--  282 (320)
Q Consensus       210 ~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~-----~~--  282 (320)
                      +..++|+|++|+|++++.++..+.     .+++||+++++.+|+.|+++.+.+ ++  ..   ..+...+.     ..  
T Consensus       294 ~~~~~~v~v~DvA~ai~~~~~~~~-----~g~~~~l~~~~~~s~~el~~~i~~-~g--~~---~~~~~~~~~~l~~~~~~  362 (427)
T 4f6c_A          294 EMPVDFSFVDTTARQIVALAQVNT-----PQIIYHVLSPNKMPVKSLLECVKR-KE--IE---LVSDESFNEILQKQDMY  362 (427)
T ss_dssp             TCEECCEEHHHHHHHHHHHTTSCC-----CCSEEEESCSCCEEHHHHHHHHHS-SC--CE---EECHHHHHHHHHHTTCH
T ss_pred             cceEEEeeHHHHHHHHHHHHcCCC-----CCCEEEecCCCCCcHHHHHHHHHH-cC--Cc---ccCHHHHHHHHHhcCch
Confidence            678999999999999999998753     355999999999999999999998 55  11   11111000     00  


Q ss_pred             --------CCCCCccccChHHHH---hhcCCCc-cCHHHHHHHHHhhhc
Q 020880          283 --------VQSPADISMDITKLV---QTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       283 --------~~~~~~~~~d~~k~~---~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                              ........+|+++..   +.+||++ ..-++.++.++++++
T Consensus       363 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~  411 (427)
T 4f6c_A          363 ETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIK  411 (427)
T ss_dssp             HHHHHHHHHHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHH
T ss_pred             hhhhhhhccccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence                    001124567887776   4569998 444568888887764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.2e-36  Score=277.11  Aligned_cols=256  Identities=18%  Similarity=0.196  Sum_probs=195.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhc---cCCCceEEEecCCCCChhh---hhhh---------------CCCcceEEEee
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEI---EGKPYDVAATHHSTPLPQL---LLDA---------------LPHSFVFFDVD   60 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~---g~~v~~v~~~~r~~~~~~~---~~~~---------------~~~~~~~~~~D   60 (320)
                      .+|+|||||||||||++|+++|+++   |   ++|++++|+++....   +.+.               ...++.++.+|
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g---~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLRRLDVD---GRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHHSCTT---CEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhcCCCC---CEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            3789999999999999999999999   8   899999998764321   1111               12578899999


Q ss_pred             CCC------cccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcc
Q 020880           61 LKS------GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG  134 (320)
Q Consensus        61 l~d------~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~  134 (320)
                      +++      .+.+.++++   ++|+||||||....    .++...+++|+.++. +++++|.+.++++|||+||.++|+.
T Consensus       149 l~~~~~gld~~~~~~~~~---~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~-~ll~aa~~~~~~~~V~iSS~~v~~~  220 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE---TVDLIVDSAAMVNA----FPYHELFGPNVAGTA-ELIRIALTTKLKPFTYVSTADVGAA  220 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH---HCCEEEECCSSCSB----SSCCEEHHHHHHHHH-HHHHHHTSSSCCCEEEEEEGGGGTT
T ss_pred             CCCcccCCCHHHHHHHHc---CCCEEEECccccCC----cCHHHHHHHHHHHHH-HHHHHHHhCCCCeEEEEeehhhcCc
Confidence            984      456777776   79999999998754    456788999999996 9999999999999999999999986


Q ss_pred             cC-CCCcccCCCCCcch-----------HHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCC--CCCCChHHHHH
Q 020880          135 VK-SFYKEEDEIAPVNV-----------YGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISP--VPKSLPIQWID  196 (320)
Q Consensus       135 ~~-~~~~E~~~~~p~~~-----------Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~  196 (320)
                      .. .+++|+++..|.++           |+.+|..+|.+++++    +.+++++||++|||+.....  ....++..++.
T Consensus       221 ~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~  300 (478)
T 4dqv_A          221 IEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVL  300 (478)
T ss_dssp             SCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHH
T ss_pred             cCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHH
Confidence            44 47888876554444           999999999999875    67899999999999865221  12233444444


Q ss_pred             HHHhcCCceEe-e--------cCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC--cCHHHHHHHHHHHhC
Q 020880          197 SVLSKGEKVEF-F--------HDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR--VSRVQMAEVVAEIRG  265 (320)
Q Consensus       197 ~~~~~~~~~~~-~--------~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~--~s~~e~~~~i~~~~~  265 (320)
                      .....|..... .        ++..++|+|++|+|++++.++.+........+++||+++++.  +|+.|+++.+.+. +
T Consensus       301 ~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g  379 (478)
T 4dqv_A          301 SLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-G  379 (478)
T ss_dssp             HHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-T
T ss_pred             HHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-C
Confidence            44433332111 1        135789999999999999998863222223456999999988  9999999999995 7


Q ss_pred             CCCC
Q 020880          266 YSTS  269 (320)
Q Consensus       266 ~~~~  269 (320)
                      .+..
T Consensus       380 ~~~~  383 (478)
T 4dqv_A          380 YPIR  383 (478)
T ss_dssp             CSCE
T ss_pred             CCcc
Confidence            6654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=5.9e-37  Score=252.73  Aligned_cols=222  Identities=12%  Similarity=0.110  Sum_probs=173.9

Q ss_pred             CC-CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            1 MS-KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         1 m~-~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |+ ||+|||||||||||++++++|+++|   ++|++++|++++...+    ..+++++.+|++|++++.++++   ++|+
T Consensus         1 M~~m~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~---~~d~   70 (227)
T 3dhn_A            1 MEKVKKIVLIGASGFVGSALLNEALNRG---FEVTAVVRHPEKIKIE----NEHLKVKKADVSSLDEVCEVCK---GADA   70 (227)
T ss_dssp             --CCCEEEEETCCHHHHHHHHHHHHTTT---CEEEEECSCGGGCCCC----CTTEEEECCCTTCHHHHHHHHT---TCSE
T ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCC---CEEEEEEcCcccchhc----cCceEEEEecCCCHHHHHHHhc---CCCE
Confidence            55 6899999999999999999999999   8999999986554322    3578899999999999988887   8999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAE  159 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e  159 (320)
                      |||+|+...      +....+++|+.++. ++++++++.++++|||+||..+|+.......|+++..|.+.|+.+|...|
T Consensus        71 vi~~a~~~~------~~~~~~~~n~~~~~-~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e  143 (227)
T 3dhn_A           71 VISAFNPGW------NNPDIYDETIKVYL-TIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGE  143 (227)
T ss_dssp             EEECCCC------------CCSHHHHHHH-HHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHH
T ss_pred             EEEeCcCCC------CChhHHHHHHHHHH-HHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHH
Confidence            999998642      12237888999995 99999999999999999999988766665677888889999999999999


Q ss_pred             HHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhcc
Q 020880          160 KFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE  235 (320)
Q Consensus       160 ~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  235 (320)
                      .+++.+    +.+++++||+.+||++.....   +         ..+....+.....++|+|++|+|++++.+++++...
T Consensus       144 ~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~---~---------~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~  211 (227)
T 3dhn_A          144 FYLNFLMKEKEIDWVFFSPAADMRPGVRTGR---Y---------RLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHH  211 (227)
T ss_dssp             HHHHTGGGCCSSEEEEEECCSEEESCCCCCC---C---------EEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCC
T ss_pred             HHHHHHhhccCccEEEEeCCcccCCCccccc---e---------eecCCCcccCCCCCcEEeHHHHHHHHHHHHhCcccc
Confidence            777665    457899999999999863211   1         012222222233389999999999999999996443


Q ss_pred             ccccCceeEecCCCCcCHHH
Q 020880          236 DKQMQLLLNVGGPDRVSRVQ  255 (320)
Q Consensus       236 ~~~~~~~~n~~~~~~~s~~e  255 (320)
                          ++.|+++++++.++.+
T Consensus       212 ----g~~~~~~~~~~~~~~~  227 (227)
T 3dhn_A          212 ----QERFTIGYLEHHHHHH  227 (227)
T ss_dssp             ----SEEEEEECCSCCC---
T ss_pred             ----CcEEEEEeehhcccCC
Confidence                4599999999888753

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=1.3e-36  Score=279.28  Aligned_cols=294  Identities=15%  Similarity=0.104  Sum_probs=212.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh---hh------------hhhCCCcceEEEeeCCCcccH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ---LL------------LDALPHSFVFFDVDLKSGSGF   67 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~---~~------------~~~~~~~~~~~~~Dl~d~~~~   67 (320)
                      +|+|||||||||||++|+++|++.|   ++|++++|+..+..   ++            ......++.++.+|++|++.+
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  226 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYS---HRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  226 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTE---EEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSC
T ss_pred             CCeEEEECCccchHHHHHHHHHhcC---CEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccC
Confidence            6899999999999999999999999   89999999977321   11            112246789999999998887


Q ss_pred             HHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcc------cCCCCcc
Q 020880           68 DAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG------VKSFYKE  141 (320)
Q Consensus        68 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~------~~~~~~E  141 (320)
                      . .   ..++|+||||||....   ..++...+++|+.++. +++++|.+ +.++|||+||.++ |.      ...+++|
T Consensus       227 ~-~---~~~~D~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~-~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E  296 (508)
T 4f6l_B          227 V-L---PENMDTIIHAGARTDH---FGDDDEFEKVNVQGTV-DVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSE  296 (508)
T ss_dssp             C-C---SSCCSEEEECCCC-----------CCHHHHHHHHH-HHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECT
T ss_pred             C-C---ccCCCEEEECCceecC---CCCHHHHhhhHHHHHH-HHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCccccc
Confidence            7 2   2489999999998642   3356788899999995 99999998 6679999999999 43      1337888


Q ss_pred             cCC---CCCcchHHHHHHHHHHHHHHH---cCCeeEEeecccccCCCCCCCC----CCChHHHHHHHHhcCCceEee-cC
Q 020880          142 EDE---IAPVNVYGKSKVAAEKFIYEK---CSNFAILRSSIIYGPQTISPVP----KSLPIQWIDSVLSKGEKVEFF-HD  210 (320)
Q Consensus       142 ~~~---~~p~~~Y~~sK~~~e~~~~~~---~~~~~ilR~~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~  210 (320)
                      +++   ..|.+.|+.+|+.+|++++++   +.+++++||+.|||+.......    ...+..++.... .+..+... ++
T Consensus       297 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~g~  375 (508)
T 4f6l_B          297 ADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLL-QLDCIGVSMAE  375 (508)
T ss_dssp             TCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHT-TCSEEETTGGG
T ss_pred             ccccccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHH-HcCCCCCCccC
Confidence            887   457889999999999999874   5689999999999998753311    122334444433 44545443 46


Q ss_pred             cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccc--cCC-------
Q 020880          211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASS--VDR-------  281 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~--~~~-------  281 (320)
                      +.++|+|++|+|++++.++.++.     .+++||+++++.+|+.|+++.+.+.. .+  .+ +.+...  ...       
T Consensus       376 ~~~~~v~v~DvA~ai~~~~~~~~-----~~~~~nl~~~~~~s~~el~~~i~~~~-~~--~~-~~~~w~~~l~~~~~~~~~  446 (508)
T 4f6l_B          376 MPVDFSFVDTTARQIVALAQVNT-----PQIIYHVLSPNKMPVKSLLECVKRKE-IE--LV-SDESFNEILQKQDMYETI  446 (508)
T ss_dssp             SEEECEEHHHHHHHHHHHTTBCC-----SCSEEEESCSCEEEHHHHHHHHHSSC-CE--EE-CHHHHHHHHHTTCCHHHH
T ss_pred             ceEEEEcHHHHHHHHHHHHhCCC-----CCCEEEeCCCCCCCHHHHHHHHHHcC-Cc--cc-CHHHHHHHHHhcCCccch
Confidence            78999999999999999998753     35599999999999999999998754 11  11 000000  000       


Q ss_pred             ----CCCCCCccccChHHHH---hhcCCCc-cCHHHHHHHHHhhhc
Q 020880          282 ----GVQSPADISMDITKLV---QTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       282 ----~~~~~~~~~~d~~k~~---~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                          .........+|+++..   +.+||.+ ..-++.+++++++++
T Consensus       447 ~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~  492 (508)
T 4f6l_B          447 GLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIK  492 (508)
T ss_dssp             HHHHTGGGSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHH
T ss_pred             hcccccccCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Confidence                0001224567777766   4469998 555778888887764

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=100.00  E-value=1.5e-35  Score=250.29  Aligned_cols=231  Identities=13%  Similarity=0.059  Sum_probs=186.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||+|||||||||||++++++|+++|   ++|+++.|++....      ..++.++.+|++|++++.++++   ++|+|||
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~---~~d~vi~   69 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLA---HEVRLSDIVDLGAA------EAHEEIVACDLADAQAVHDLVK---DCDGIIH   69 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTE---EEEEECCSSCCCCC------CTTEEECCCCTTCHHHHHHHHT---TCSEEEE
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCC---CEEEEEeCCCcccc------CCCccEEEccCCCHHHHHHHHc---CCCEEEE
Confidence            5799999999999999999999999   89999999865421      1356788999999998888887   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC--CCCcccCCCCCcchHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAAEK  160 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~--~~~~E~~~~~p~~~Y~~sK~~~e~  160 (320)
                      +|+...    ..+++..+++|+.++. ++++++.+.++++|||+||.++|+...  .+++|+++..|.+.|+.+|..+|.
T Consensus        70 ~a~~~~----~~~~~~~~~~n~~~~~-~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  144 (267)
T 3ay3_A           70 LGGVSV----ERPWNDILQANIIGAY-NLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGED  144 (267)
T ss_dssp             CCSCCS----CCCHHHHHHHTHHHHH-HHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             CCcCCC----CCCHHHHHHHHHHHHH-HHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Confidence            999752    2356788999999996 999999999999999999999998643  479999999999999999999999


Q ss_pred             HHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccc
Q 020880          161 FIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED  236 (320)
Q Consensus       161 ~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  236 (320)
                      +++.+    +.+++++||+.+|+...                         .+...++|+|++|+|++++.+++++..+ 
T Consensus       145 ~~~~~~~~~gi~~~~lrp~~v~~~~~-------------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~-  198 (267)
T 3ay3_A          145 LASLYYHKFDIETLNIRIGSCFPKPK-------------------------DARMMATWLSVDDFMRLMKRAFVAPKLG-  198 (267)
T ss_dssp             HHHHHHHTTCCCEEEEEECBCSSSCC-------------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCC-
T ss_pred             HHHHHHHHcCCCEEEEeceeecCCCC-------------------------CCCeeeccccHHHHHHHHHHHHhCCCCC-
Confidence            88754    56899999999994210                         0112456899999999999999874322 


Q ss_pred             cccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHHH
Q 020880          237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTL  315 (320)
Q Consensus       237 ~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~i  315 (320)
                         ..+||+.++..                                     ....|..++ +.|||+| +++++++++++
T Consensus       199 ---~~~~~~~~~~~-------------------------------------~~~~d~~~~-~~lg~~p~~~~~~~~~~~~  237 (267)
T 3ay3_A          199 ---CTVVYGASANT-------------------------------------ESWWDNDKS-AFLGWVPQDSSEIWREEIE  237 (267)
T ss_dssp             ---EEEEEECCSCS-------------------------------------SCCBCCGGG-GGGCCCCCCCGGGGHHHHH
T ss_pred             ---ceeEecCCCcc-------------------------------------ccccCHHHH-HHcCCCCCCCHHHHHHHHH
Confidence               23777754321                                     123566777 7789999 89999999887


Q ss_pred             hh
Q 020880          316 AA  317 (320)
Q Consensus       316 ~~  317 (320)
                      +.
T Consensus       238 ~~  239 (267)
T 3ay3_A          238 QQ  239 (267)
T ss_dssp             HS
T ss_pred             hh
Confidence            63

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=1.2e-35  Score=259.45  Aligned_cols=231  Identities=17%  Similarity=0.276  Sum_probs=186.7

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhc-cCCCc-eEEEecCCCCChhhhhhhC-CCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEI-EGKPY-DVAATHHSTPLPQLLLDAL-PHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~-g~~v~-~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      |++|+|||||||||||++++++|+++ |   + +|++++|++.+...+...+ ..++.++.+|++|.+++.++++   ++
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g---~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~---~~   92 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTN---AKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE---GV   92 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCC---CSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT---TC
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCC---CCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh---cC
Confidence            34689999999999999999999999 9   5 8999999866554443332 2468889999999998888876   89


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHH
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVA  157 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~  157 (320)
                      |+|||+||....+.++.++...+++|+.++. +++++|.+.++++||++||..++             .|.++|+.+|..
T Consensus        93 D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~-~l~~aa~~~~v~~~V~~SS~~~~-------------~p~~~Y~~sK~~  158 (344)
T 2gn4_A           93 DICIHAAALKHVPIAEYNPLECIKTNIMGAS-NVINACLKNAISQVIALSTDKAA-------------NPINLYGATKLC  158 (344)
T ss_dssp             SEEEECCCCCCHHHHHHSHHHHHHHHHHHHH-HHHHHHHHTTCSEEEEECCGGGS-------------SCCSHHHHHHHH
T ss_pred             CEEEECCCCCCCCchhcCHHHHHHHHHHHHH-HHHHHHHhCCCCEEEEecCCccC-------------CCccHHHHHHHH
Confidence            9999999987655555678899999999996 99999999999999999998765             256799999999


Q ss_pred             HHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCC-ceEee-cCcccCceeHHHHHHHHHHH
Q 020880          158 AEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGE-KVEFF-HDECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       158 ~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~i~v~D~a~~~~~~  228 (320)
                      +|.+++.+.       .+++++||++|||+..      ..+..++ ..+..+. ++.+. ++..++|+|++|+|++++.+
T Consensus       159 ~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~------~~i~~~~-~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~  231 (344)
T 2gn4_A          159 SDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG------SVVPFFK-KLVQNKASEIPITDIRMTRFWITLDEGVSFVLKS  231 (344)
T ss_dssp             HHHHHHHGGGCCCSSCCEEEEECCCEETTCTT------SHHHHHH-HHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCcEEEEEEeccEECCCC------CHHHHHH-HHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHH
Confidence            999998764       5689999999999874      1233333 3344566 66665 34578999999999999999


Q ss_pred             HhhhhccccccCceeEecCCCCcCHHHHHHHHHHHh
Q 020880          229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIR  264 (320)
Q Consensus       229 ~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~  264 (320)
                      +++..     .+++||+.++ .+|+.|+++.+.+.+
T Consensus       232 l~~~~-----~g~~~~~~~~-~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          232 LKRMH-----GGEIFVPKIP-SMKMTDLAKALAPNT  261 (344)
T ss_dssp             HHHCC-----SSCEEEECCC-EEEHHHHHHHHCTTC
T ss_pred             Hhhcc-----CCCEEecCCC-cEEHHHHHHHHHHhC
Confidence            98742     2448998776 699999999997644

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=100.00  E-value=3.4e-35  Score=257.30  Aligned_cols=280  Identities=11%  Similarity=0.108  Sum_probs=202.4

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh-h---hhhhCCCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-L---LLDALPHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~-~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      |++|+|||||||||||++|++.|+++|   ++|++++|+++... .   +......+++++.+|++|.+++.++++.. +
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~-~   83 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAH---RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH-E   83 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTT---CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-T
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCC---CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-C
Confidence            456799999999999999999999999   88999999863221 1   11111357889999999999999988865 8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-CceEEEeechhhhcccCCCCcccCCCCCcchHHHHH
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSK  155 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK  155 (320)
                      +|+|||+|+..               |+.++. +++++|++.+ +++||+ |   +||.   +.+|+++..|.+.|+.+|
T Consensus        84 ~d~Vi~~a~~~---------------n~~~~~-~l~~aa~~~g~v~~~v~-S---~~g~---~~~e~~~~~p~~~y~~sK  140 (346)
T 3i6i_A           84 IDIVVSTVGGE---------------SILDQI-ALVKAMKAVGTIKRFLP-S---EFGH---DVNRADPVEPGLNMYREK  140 (346)
T ss_dssp             CCEEEECCCGG---------------GGGGHH-HHHHHHHHHCCCSEEEC-S---CCSS---CTTTCCCCTTHHHHHHHH
T ss_pred             CCEEEECCchh---------------hHHHHH-HHHHHHHHcCCceEEee-c---ccCC---CCCccCcCCCcchHHHHH
Confidence            99999999852               777775 9999999999 989886 3   4552   356777778889999999


Q ss_pred             HHHHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHhhhh
Q 020880          156 VAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRWL  233 (320)
Q Consensus       156 ~~~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~~~~  233 (320)
                      ..+|+++++.+.+++++||+.++|.......      ... .....+..+.++++  ..++|+|++|+|++++.++.++.
T Consensus       141 ~~~e~~l~~~g~~~tivrpg~~~g~~~~~~~------~~~-~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~  213 (346)
T 3i6i_A          141 RRVRQLVEESGIPFTYICCNSIASWPYYNNI------HPS-EVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR  213 (346)
T ss_dssp             HHHHHHHHHTTCCBEEEECCEESSCCCSCC------------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGG
T ss_pred             HHHHHHHHHcCCCEEEEEecccccccCcccc------ccc-cccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCcc
Confidence            9999999999999999999999997532111      011 01224555666654  58899999999999999999864


Q ss_pred             ccccccCceeEecC-CCCcCHHHHHHHHHHHhCCCCCccccCCcccc----CCC-CC-------------CCCccccCh-
Q 020880          234 SEDKQMQLLLNVGG-PDRVSRVQMAEVVAEIRGYSTSLIKPVSASSV----DRG-VQ-------------SPADISMDI-  293 (320)
Q Consensus       234 ~~~~~~~~~~n~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~----~~~-~~-------------~~~~~~~d~-  293 (320)
                      ..    +++|++.+ ++.+|+.|+++.+.+.+|.+..+. ..+...+    ... ..             ......++. 
T Consensus       214 ~~----~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~  288 (346)
T 3i6i_A          214 TL----NKSVHFRPSCNCLNINELASVWEKKIGRTLPRV-TVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSID  288 (346)
T ss_dssp             GT----TEEEECCCGGGEECHHHHHHHHHHHHTSCCCEE-EECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCC
T ss_pred             cc----CeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceE-ecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccC
Confidence            32    44899875 478999999999999999886543 1221111    000 00             000011222 


Q ss_pred             ----HHHHhhc-CCCccCHHHHHHHHHhhhc
Q 020880          294 ----TKLVQTL-NIDPVTYKDGVKLTLAAEA  319 (320)
Q Consensus       294 ----~k~~~~l-g~~~~~~~~~l~~~i~~~~  319 (320)
                          .++++.+ ++++++++|.|+++++|++
T Consensus       289 ~~~~~~~~~~~p~~~~t~~~e~l~~~~~~~~  319 (346)
T 3i6i_A          289 GPEDVEVTTLYPEDSFRTVEECFGEYIVKME  319 (346)
T ss_dssp             STTEEEHHHHSTTCCCCCHHHHHHHHHCC--
T ss_pred             CCCcccHHHhCCCCCcCcHHHHHHHHHHHhh
Confidence                2234444 7888999999999999875

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=2.9e-35  Score=241.23  Aligned_cols=208  Identities=15%  Similarity=0.201  Sum_probs=171.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCC-cccHHHHHHHhCCCCEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS-GSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~d~Vih   82 (320)
                      |+|||||||||||++++++|+++|   ++|++++|++++....     .+++++.+|++| ++++.++++   ++|+|||
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~---~~d~vi~   69 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTD---YQIYAGARKVEQVPQY-----NNVKAVHFDVDWTPEEMAKQLH---GMDAIIN   69 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSS---CEEEEEESSGGGSCCC-----TTEEEEECCTTSCHHHHHTTTT---TCSEEEE
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCccchhhc-----CCceEEEecccCCHHHHHHHHc---CCCEEEE
Confidence            489999999999999999999999   8999999987554322     468899999999 888887776   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI  162 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  162 (320)
                      +||...        ...+++|+.++. +++++|++.++++||++||.+++++.  +.+| ++..|.+.|+.+|..+|+++
T Consensus        70 ~ag~~~--------~~~~~~n~~~~~-~l~~a~~~~~~~~iv~~SS~~~~~~~--~~~e-~~~~~~~~Y~~sK~~~e~~~  137 (219)
T 3dqp_A           70 VSGSGG--------KSLLKVDLYGAV-KLMQAAEKAEVKRFILLSTIFSLQPE--KWIG-AGFDALKDYYIAKHFADLYL  137 (219)
T ss_dssp             CCCCTT--------SSCCCCCCHHHH-HHHHHHHHTTCCEEEEECCTTTTCGG--GCCS-HHHHHTHHHHHHHHHHHHHH
T ss_pred             CCcCCC--------CCcEeEeHHHHH-HHHHHHHHhCCCEEEEECcccccCCC--cccc-cccccccHHHHHHHHHHHHH
Confidence            999753        236888999995 99999999999999999998877643  4555 55667889999999999999


Q ss_pred             -HHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCc
Q 020880          163 -YEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL  241 (320)
Q Consensus       163 -~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  241 (320)
                       +..+.+++++||+.+||+....                   .+. .++..+++++++|+|++++.+++++...    ++
T Consensus       138 ~~~~~i~~~ilrp~~v~g~~~~~-------------------~~~-~~~~~~~~i~~~Dva~~i~~~l~~~~~~----g~  193 (219)
T 3dqp_A          138 TKETNLDYTIIQPGALTEEEATG-------------------LID-INDEVSASNTIGDVADTIKELVMTDHSI----GK  193 (219)
T ss_dssp             HHSCCCEEEEEEECSEECSCCCS-------------------EEE-ESSSCCCCEEHHHHHHHHHHHHTCGGGT----TE
T ss_pred             HhccCCcEEEEeCceEecCCCCC-------------------ccc-cCCCcCCcccHHHHHHHHHHHHhCcccc----Cc
Confidence             6677899999999999986421                   111 2466789999999999999999985433    45


Q ss_pred             eeEecCCCCcCHHHHHHH
Q 020880          242 LLNVGGPDRVSRVQMAEV  259 (320)
Q Consensus       242 ~~n~~~~~~~s~~e~~~~  259 (320)
                      +||++++. .+++|+++.
T Consensus       194 ~~~i~~g~-~~~~e~~~~  210 (219)
T 3dqp_A          194 VISMHNGK-TAIKEALES  210 (219)
T ss_dssp             EEEEEECS-EEHHHHHHT
T ss_pred             EEEeCCCC-ccHHHHHHH
Confidence            99998774 999988764

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=1.5e-34  Score=243.95  Aligned_cols=219  Identities=16%  Similarity=0.127  Sum_probs=180.9

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |+||+||||||||+||++++++|+++|   ++|++++|++.+..      ..+++++.+|++|++++.++++   ++|+|
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G---~~V~~~~r~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~---~~D~v   68 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMA---EILRLADLSPLDPA------GPNEECVQCDLADANAVNAMVA---GCDGI   68 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGE---EEEEEEESSCCCCC------CTTEEEEECCTTCHHHHHHHHT---TCSEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcC---CEEEEEecCCcccc------CCCCEEEEcCCCCHHHHHHHHc---CCCEE
Confidence            788999999999999999999999999   89999999876543      3468889999999999998887   89999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhccc--CCCCcccCCCCCcchHHHHHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAA  158 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~--~~~~~E~~~~~p~~~Y~~sK~~~  158 (320)
                      ||+||..    ...+++..+++|+.++. ++++++++.+.++||++||.++|+..  ..+++|+.+..|.+.|+.||...
T Consensus        69 i~~Ag~~----~~~~~~~~~~~N~~g~~-~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~  143 (267)
T 3rft_A           69 VHLGGIS----VEKPFEQILQGNIIGLY-NLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFG  143 (267)
T ss_dssp             EECCSCC----SCCCHHHHHHHHTHHHH-HHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHH
T ss_pred             EECCCCc----CcCCHHHHHHHHHHHHH-HHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHH
Confidence            9999974    23467889999999996 99999999999999999999999743  34789999999999999999999


Q ss_pred             HHHHHH----HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhc
Q 020880          159 EKFIYE----KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS  234 (320)
Q Consensus       159 e~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  234 (320)
                      |.+++.    ++.+++++||+.|||+...                         +...++|+|++|+++++..+++.+..
T Consensus       144 e~~~~~~a~~~g~~~~~vr~~~v~~~~~~-------------------------~~~~~~~~~~~d~a~~~~~~~~~~~~  198 (267)
T 3rft_A          144 ENLARMYFDKFGQETALVRIGSCTPEPNN-------------------------YRMLSTWFSHDDFVSLIEAVFRAPVL  198 (267)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECBCSSSCCS-------------------------TTHHHHBCCHHHHHHHHHHHHHCSCC
T ss_pred             HHHHHHHHHHhCCeEEEEEeecccCCCCC-------------------------CCceeeEEcHHHHHHHHHHHHhCCCC
Confidence            998864    5678999999999987321                         11234589999999999999987543


Q ss_pred             cccccCceeEecCCCCcCHHHHHHHHHHHhCCC
Q 020880          235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYS  267 (320)
Q Consensus       235 ~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~  267 (320)
                      +    ..++++.+++..++.++...  +.+|..
T Consensus       199 ~----~~~~~~~s~~~~~~~~~~~~--~~~g~~  225 (267)
T 3rft_A          199 G----CPVVWGASANDAGWWDNSHL--GFLGWK  225 (267)
T ss_dssp             C----SCEEEECCCCTTCCBCCGGG--GGGCCC
T ss_pred             C----ceEEEEeCCCCCCcccChhH--HHCCCC
Confidence            3    34788888877776665433  445554

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=100.00  E-value=1e-34  Score=256.44  Aligned_cols=214  Identities=17%  Similarity=0.223  Sum_probs=175.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |||||||||||||++|+++|+++|   + +|+.++|+                      .|++++.++++   ++|+|||
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g---~~~v~~~d~~----------------------~d~~~l~~~~~---~~d~Vih   52 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTT---DHHIFEVHRQ----------------------TKEEELESALL---KADFIVH   52 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHC---CCEEEECCTT----------------------CCHHHHHHHHH---HCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC---CCEEEEECCC----------------------CCHHHHHHHhc---cCCEEEE
Confidence            589999999999999999999999   5 66655443                      67788888887   7999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKF  161 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~  161 (320)
                      +|+...+    .++...++.|+.++. +++++|++.+++ +|||+||.++|+              .++|+.+|..+|++
T Consensus        53 ~a~~~~~----~~~~~~~~~n~~~~~-~l~~a~~~~~~~~~~v~~Ss~~~~~--------------~~~Y~~sK~~~E~~  113 (369)
T 3st7_A           53 LAGVNRP----EHDKEFSLGNVSYLD-HVLDILTRNTKKPAILLSSSIQATQ--------------DNPYGESKLQGEQL  113 (369)
T ss_dssp             CCCSBCT----TCSTTCSSSCCBHHH-HHHHHHTTCSSCCEEEEEEEGGGGS--------------CSHHHHHHHHHHHH
T ss_pred             CCcCCCC----CCHHHHHHHHHHHHH-HHHHHHHHhCCCCeEEEeCchhhcC--------------CCCchHHHHHHHHH
Confidence            9997653    356778999999995 999999999987 999999999986              55899999999999


Q ss_pred             HHH----HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEee-cCcccCceeHHHHHHHHHHHHhhhhccc
Q 020880          162 IYE----KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFF-HDECRCPVYVRDVVKIILALTNRWLSED  236 (320)
Q Consensus       162 ~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~~~~~~~~~~~~~~  236 (320)
                      +++    .+.+++++||+++||++.... ...++..++.. +..+.++.+. ++..++|+|++|+|++++.+++++... 
T Consensus       114 ~~~~~~~~g~~~~i~R~~~v~G~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~-  190 (369)
T 3st7_A          114 LREYAEEYGNTVYIYRWPNLFGKWCKPN-YNSVIATFCYK-IARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTI-  190 (369)
T ss_dssp             HHHHHHHHCCCEEEEEECEEECTTCCTT-SSCHHHHHHHH-HHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCE-
T ss_pred             HHHHHHHhCCCEEEEECCceeCCCCCCC-cchHHHHHHHH-HHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCccc-
Confidence            887    578999999999999987432 23344444443 4466666654 457899999999999999999885432 


Q ss_pred             cccCceeEecCCCCcCHHHHHHHHHHHhCCCCC
Q 020880          237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTS  269 (320)
Q Consensus       237 ~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~  269 (320)
                        .+++||+++++.+|+.|+++.+.+.+|.+.+
T Consensus       191 --~~~~~~i~~~~~~s~~e~~~~~~~~~g~~~~  221 (369)
T 3st7_A          191 --ENGVPTVPNVFKVTLGEIVDLLYKFKQSRLD  221 (369)
T ss_dssp             --ETTEECCSCCEEEEHHHHHHHHHHHHHHHHH
T ss_pred             --CCceEEeCCCCceeHHHHHHHHHHHhCCCcc
Confidence              1459999999999999999999999987643

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=5.7e-34  Score=236.23  Aligned_cols=214  Identities=17%  Similarity=0.194  Sum_probs=172.2

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcc-eEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSF-VFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |++|+||||||||+||++++++|+++|   ++|++++|++++...+..   .++ +++.+|++  +.+.+.+.   ++|+
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G---~~V~~~~R~~~~~~~~~~---~~~~~~~~~Dl~--~~~~~~~~---~~D~   87 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKG---HEPVAMVRNEEQGPELRE---RGASDIVVANLE--EDFSHAFA---SIDA   87 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHH---TTCSEEEECCTT--SCCGGGGT---TCSE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCC---CeEEEEECChHHHHHHHh---CCCceEEEcccH--HHHHHHHc---CCCE
Confidence            357899999999999999999999999   899999999877655443   257 88999999  55665555   8999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAE  159 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e  159 (320)
                      |||+||....    .+++..+++|+.++. +++++|++.++++||++||...+.+      |.++ .+.+.|+.+|..+|
T Consensus        88 vi~~ag~~~~----~~~~~~~~~n~~~~~-~l~~a~~~~~~~~iv~~SS~~~~~~------~~~~-~~~~~Y~~sK~~~e  155 (236)
T 3e8x_A           88 VVFAAGSGPH----TGADKTILIDLWGAI-KTIQEAEKRGIKRFIMVSSVGTVDP------DQGP-MNMRHYLVAKRLAD  155 (236)
T ss_dssp             EEECCCCCTT----SCHHHHHHTTTHHHH-HHHHHHHHHTCCEEEEECCTTCSCG------GGSC-GGGHHHHHHHHHHH
T ss_pred             EEECCCCCCC----CCccccchhhHHHHH-HHHHHHHHcCCCEEEEEecCCCCCC------CCCh-hhhhhHHHHHHHHH
Confidence            9999997543    467889999999996 9999999999999999999554432      2222 56789999999999


Q ss_pred             HHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEe--ecCcccCceeHHHHHHHHHHHHhhhhcccc
Q 020880          160 KFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEF--FHDECRCPVYVRDVVKIILALTNRWLSEDK  237 (320)
Q Consensus       160 ~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~  237 (320)
                      .+++..+.+++++||+.++|+....                   .+..  .+.+.++++|++|+|++++.+++++..   
T Consensus       156 ~~~~~~gi~~~~lrpg~v~~~~~~~-------------------~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~---  213 (236)
T 3e8x_A          156 DELKRSSLDYTIVRPGPLSNEESTG-------------------KVTVSPHFSEITRSITRHDVAKVIAELVDQQHT---  213 (236)
T ss_dssp             HHHHHSSSEEEEEEECSEECSCCCS-------------------EEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGG---
T ss_pred             HHHHHCCCCEEEEeCCcccCCCCCC-------------------eEEeccCCCcccCcEeHHHHHHHHHHHhcCccc---
Confidence            9999989999999999999986421                   1111  223468899999999999999988543   


Q ss_pred             ccCceeEecCCCCcCHHHHHHHHH
Q 020880          238 QMQLLLNVGGPDRVSRVQMAEVVA  261 (320)
Q Consensus       238 ~~~~~~n~~~~~~~s~~e~~~~i~  261 (320)
                       .+++||++++ ..++.|+++.+.
T Consensus       214 -~g~~~~v~~~-~~~~~e~~~~i~  235 (236)
T 3e8x_A          214 -IGKTFEVLNG-DTPIAKVVEQLG  235 (236)
T ss_dssp             -TTEEEEEEEC-SEEHHHHHHTC-
T ss_pred             -cCCeEEEeCC-CcCHHHHHHHhc
Confidence             3559999887 599999998764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=100.00  E-value=5.6e-34  Score=243.42  Aligned_cols=264  Identities=11%  Similarity=0.075  Sum_probs=194.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |+|||||||||||++++++|+++ |   ++|++++|++++...+.   ..+++++.+|++|++++.++++   ++|+|||
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g---~~V~~~~R~~~~~~~~~---~~~v~~~~~D~~d~~~l~~~~~---~~d~vi~   71 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHI---DHFHIGVRNVEKVPDDW---RGKVSVRQLDYFNQESMVEAFK---GMDTVVF   71 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTC---TTEEEEESSGGGSCGGG---BTTBEEEECCTTCHHHHHHHTT---TCSEEEE
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCC---CcEEEEECCHHHHHHhh---hCCCEEEEcCCCCHHHHHHHHh---CCCEEEE
Confidence            47999999999999999999987 8   88999999876654432   2478899999999999888887   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI  162 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  162 (320)
                      +|+.....          ..|+.++ .+++++|++.++++|||+||...   .     +..+    ..+...+..+|..+
T Consensus        72 ~a~~~~~~----------~~~~~~~-~~l~~aa~~~gv~~iv~~Ss~~~---~-----~~~~----~~~~~~~~~~e~~~  128 (289)
T 3e48_A           72 IPSIIHPS----------FKRIPEV-ENLVYAAKQSGVAHIIFIGYYAD---Q-----HNNP----FHMSPYFGYASRLL  128 (289)
T ss_dssp             CCCCCCSH----------HHHHHHH-HHHHHHHHHTTCCEEEEEEESCC---S-----TTCC----STTHHHHHHHHHHH
T ss_pred             eCCCCccc----------hhhHHHH-HHHHHHHHHcCCCEEEEEcccCC---C-----CCCC----CccchhHHHHHHHH
Confidence            99865321          2366666 49999999999999999999432   1     1111    12334455788888


Q ss_pred             HHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCce
Q 020880          163 YEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL  242 (320)
Q Consensus       163 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  242 (320)
                      ++.+.+++++||+.++|+..          .++......+......+++.++|+|++|+|++++.++.++...    +++
T Consensus       129 ~~~g~~~~ilrp~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~----g~~  194 (289)
T 3e48_A          129 STSGIDYTYVRMAMYMDPLK----------PYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTW----GKR  194 (289)
T ss_dssp             HHHCCEEEEEEECEESTTHH----------HHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT----TCE
T ss_pred             HHcCCCEEEEeccccccccH----------HHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcC----Cce
Confidence            88899999999999999732          2344444334333333567899999999999999999885432    459


Q ss_pred             eEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCC----C------------CCCccccChHHHHhhcCCCccC
Q 020880          243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGV----Q------------SPADISMDITKLVQTLNIDPVT  306 (320)
Q Consensus       243 ~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~------------~~~~~~~d~~k~~~~lg~~~~~  306 (320)
                      ||++ ++.+|+.|+++.+.+.+|.+..+. ..+...+....    .            .......+.+.+++.+|++|++
T Consensus       195 ~~~~-~~~~s~~e~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~~  272 (289)
T 3e48_A          195 YLLS-GYSYDMKELAAILSEASGTEIKYE-PVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQT  272 (289)
T ss_dssp             EEEC-CEEEEHHHHHHHHHHHHTSCCEEC-CCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCCC
T ss_pred             EEeC-CCcCCHHHHHHHHHHHHCCceeEE-eCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCCC
Confidence            9999 999999999999999999875432 22221111000    0            1122335667788889999999


Q ss_pred             HHHHHHHHH
Q 020880          307 YKDGVKLTL  315 (320)
Q Consensus       307 ~~~~l~~~i  315 (320)
                      +++.+++.-
T Consensus       273 ~~~~~~~~~  281 (289)
T 3e48_A          273 LQSFLQENI  281 (289)
T ss_dssp             HHHHHHC--
T ss_pred             HHHHHHHHH
Confidence            999988653

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=100.00  E-value=7.6e-33  Score=231.67  Aligned_cols=231  Identities=12%  Similarity=0.081  Sum_probs=175.6

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhc--cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEI--EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~--g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      |+||+|||||||||||++++++|+++  |   ++|+++.|++++...+    ..++.++.+|++|++++.++++   ++|
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g---~~V~~~~r~~~~~~~~----~~~~~~~~~D~~d~~~~~~~~~---~~d   71 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDK---FVAKGLVRSAQGKEKI----GGEADVFIGDITDADSINPAFQ---GID   71 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTT---CEEEEEESCHHHHHHT----TCCTTEEECCTTSHHHHHHHHT---TCS
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCC---cEEEEEEcCCCchhhc----CCCeeEEEecCCCHHHHHHHHc---CCC
Confidence            56789999999999999999999999  7   8999999986443322    3467889999999999988887   899


Q ss_pred             EEEECCCccCccc------cc-------cCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           79 VVVNCAALSVPRV------CE-------NDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        79 ~Vih~a~~~~~~~------~~-------~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +|||+|+......      +.       .+....+++|+.++. ++++++++.++++||++||.+++...       .+.
T Consensus        72 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~iv~~SS~~~~~~~-------~~~  143 (253)
T 1xq6_A           72 ALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK-NQIDAAKVAGVKHIVVVGSMGGTNPD-------HPL  143 (253)
T ss_dssp             EEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHH-HHHHHHHHHTCSEEEEEEETTTTCTT-------CGG
T ss_pred             EEEEeccccccccccccccccccchhhccccccceeeeHHHHH-HHHHHHHHcCCCEEEEEcCccCCCCC-------Ccc
Confidence            9999999753211      11       122346789999995 99999999998999999999876321       111


Q ss_pred             CC--cchHHHHHHHHHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHH
Q 020880          146 AP--VNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK  223 (320)
Q Consensus       146 ~p--~~~Y~~sK~~~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  223 (320)
                      .+  .+.|+.+|..+|.++++.+.+++++||+.+||+.....   ...       ......  +.+ ...+++|++|+|+
T Consensus       144 ~~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~---~~~-------~~~~~~--~~~-~~~~~~~~~Dva~  210 (253)
T 1xq6_A          144 NKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR---ELL-------VGKDDE--LLQ-TDTKTVPRADVAE  210 (253)
T ss_dssp             GGGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSS---CEE-------EESTTG--GGG-SSCCEEEHHHHHH
T ss_pred             ccccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchh---hhh-------ccCCcC--CcC-CCCcEEcHHHHHH
Confidence            11  23588899999999999889999999999999875210   000       000111  111 2356899999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCCC---CcCHHHHHHHHHHHhCC
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGPD---RVSRVQMAEVVAEIRGY  266 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~~---~~s~~e~~~~i~~~~~~  266 (320)
                      +++.+++++..    .+++||+++++   .+|+.|+++.+.+.+|+
T Consensus       211 ~~~~~~~~~~~----~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          211 VCIQALLFEEA----KNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             HHHHHTTCGGG----TTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             HHHHHHcCccc----cCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            99999987532    24599999864   59999999999988775

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=100.00  E-value=1.1e-32  Score=236.61  Aligned_cols=280  Identities=12%  Similarity=0.048  Sum_probs=198.8

Q ss_pred             CC-CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhh-hhhhCCCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            1 MS-KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         1 m~-~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      |+ +|+||||||||+||++++++|+++|.  ++|++++|++++... .+.  ..+++++.+|++|++++.++++   ++|
T Consensus         2 M~~~~~ilVtGatG~iG~~l~~~L~~~g~--~~V~~~~R~~~~~~~~~l~--~~~~~~~~~D~~d~~~l~~~~~---~~d   74 (299)
T 2wm3_A            2 MVDKKLVVVFGGTGAQGGSVARTLLEDGT--FKVRVVTRNPRKKAAKELR--LQGAEVVQGDQDDQVIMELALN---GAY   74 (299)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHHCS--SEEEEEESCTTSHHHHHHH--HTTCEEEECCTTCHHHHHHHHT---TCS
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhcCC--ceEEEEEcCCCCHHHHHHH--HCCCEEEEecCCCHHHHHHHHh---cCC
Confidence            43 57999999999999999999999873  689999998766421 111  1357889999999999988887   899


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHH
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAA  158 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~  158 (320)
                      +|||+|+.....        ..+.|+.++ .+++++|++.++++||++||..+|+....        .+..+|+.+|..+
T Consensus        75 ~vi~~a~~~~~~--------~~~~~~~~~-~~~~~aa~~~gv~~iv~~S~~~~~~~~~~--------~~~~~y~~sK~~~  137 (299)
T 2wm3_A           75 ATFIVTNYWESC--------SQEQEVKQG-KLLADLARRLGLHYVVYSGLENIKKLTAG--------RLAAAHFDGKGEV  137 (299)
T ss_dssp             EEEECCCHHHHT--------CHHHHHHHH-HHHHHHHHHHTCSEEEECCCCCHHHHTTT--------SCCCHHHHHHHHH
T ss_pred             EEEEeCCCCccc--------cchHHHHHH-HHHHHHHHHcCCCEEEEEcCccccccCCC--------cccCchhhHHHHH
Confidence            999999753110        133456666 49999999999999999998888763221        2356899999999


Q ss_pred             HHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCc--eEee-cCcccCceeHHHHHHHHHHHHhhhhcc
Q 020880          159 EKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEK--VEFF-HDECRCPVYVRDVVKIILALTNRWLSE  235 (320)
Q Consensus       159 e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~D~a~~~~~~~~~~~~~  235 (320)
                      |+++++.+.+++++||+.+||+.......         .....+..  +.++ ++..++|+|++|+|+++..++.++.. 
T Consensus       138 e~~~~~~gi~~~ilrp~~~~~~~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-  207 (299)
T 2wm3_A          138 EEYFRDIGVPMTSVRLPCYFENLLSHFLP---------QKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEK-  207 (299)
T ss_dssp             HHHHHHHTCCEEEEECCEEGGGGGTTTCC---------EECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHH-
T ss_pred             HHHHHHCCCCEEEEeecHHhhhchhhcCC---------cccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhh-
Confidence            99999999999999999999975321110         11123322  2222 55788999999999999999986421 


Q ss_pred             ccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCC-CCCC-----------CCccccChHHHHhhcCCC
Q 020880          236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDR-GVQS-----------PADISMDITKLVQTLNID  303 (320)
Q Consensus       236 ~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~-----------~~~~~~d~~k~~~~lg~~  303 (320)
                        ..+++||+++ +.+|+.|+++.+.+.+|.+.... ..+...+.. ....           ......+ ....+.+|.+
T Consensus       208 --~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~  282 (299)
T 2wm3_A          208 --YVGQNIGLST-CRHTAEEYAALLTKHTRKVVHDA-KMTPEDYEKLGFPGARDLANMFRFYALRPDRD-IELTLRLNPK  282 (299)
T ss_dssp             --HTTCEEECCS-EEECHHHHHHHHHHHHSSCEEEC-CCCTHHHHTTCSTTHHHHHHHHHHHTTCCCCC-HHHHHHHCTT
T ss_pred             --hCCeEEEeee-ccCCHHHHHHHHHHHHCCCceeE-ecCHHHHHhcCCCcHHHHHHHHHHHHhcCCCC-HHHHHHhCCC
Confidence              1244899986 67999999999999999875432 222221111 0000           0111122 3345668999


Q ss_pred             ccCHHHHHHHHHhhhc
Q 020880          304 PVTYKDGVKLTLAAEA  319 (320)
Q Consensus       304 ~~~~~~~l~~~i~~~~  319 (320)
                      |++++|.+++....|+
T Consensus       283 ~~~~~~~~~~~~~~~~  298 (299)
T 2wm3_A          283 ALTLDQWLEQHKGDFN  298 (299)
T ss_dssp             CCCHHHHHHHHGGGCC
T ss_pred             CCCHHHHHHhChhhcC
Confidence            9999999998876553

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=100.00  E-value=8.1e-33  Score=226.88  Aligned_cols=214  Identities=13%  Similarity=0.132  Sum_probs=142.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |||||||||||||++++++|+++|   ++|++++|++++...+.    .+++++.+|++|+++  +.+.   ++|+|||+
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~----~~~~~~~~D~~d~~~--~~~~---~~d~vi~~   68 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRG---HEVTAIVRNAGKITQTH----KDINILQKDIFDLTL--SDLS---DQNVVVDA   68 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCSHHHHHHC----SSSEEEECCGGGCCH--HHHT---TCSEEEEC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCC---CEEEEEEcCchhhhhcc----CCCeEEeccccChhh--hhhc---CCCEEEEC
Confidence            579999999999999999999999   89999999976554432    468899999999987  4444   89999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC--CCcccCCCCCcchHHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS--FYKEEDEIAPVNVYGKSKVAAEKF  161 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~--~~~E~~~~~p~~~Y~~sK~~~e~~  161 (320)
                      ||....         ....|+.++. ++++++++.+.+++|++||..+|.....  +..|+++..|.+.|+.+|...|.+
T Consensus        69 ag~~~~---------~~~~~~~~~~-~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~  138 (221)
T 3ew7_A           69 YGISPD---------EAEKHVTSLD-HLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQL  138 (221)
T ss_dssp             CCSSTT---------TTTSHHHHHH-HHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHH
T ss_pred             CcCCcc---------ccchHHHHHH-HHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHH
Confidence            997321         2456888884 9999999998889999999877654333  667778888888999999999986


Q ss_pred             --HH--HHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhcccc
Q 020880          162 --IY--EKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK  237 (320)
Q Consensus       162 --~~--~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~  237 (320)
                        ++  ..+.+++++||+.+||++....   .    +.    ..+..+.+.+++ .+++|++|+|++++.+++++..   
T Consensus       139 ~~~~~~~~gi~~~ivrp~~v~g~~~~~~---~----~~----~~~~~~~~~~~~-~~~i~~~Dva~~~~~~l~~~~~---  203 (221)
T 3ew7_A          139 EHLKSHQAEFSWTYISPSAMFEPGERTG---D----YQ----IGKDHLLFGSDG-NSFISMEDYAIAVLDEIERPNH---  203 (221)
T ss_dssp             HHHHTTTTTSCEEEEECSSCCCCC---------------------------------CCCHHHHHHHHHHHHHSCSC---
T ss_pred             HHHHhhccCccEEEEeCcceecCCCccC---c----eE----eccccceecCCC-CceEeHHHHHHHHHHHHhCccc---
Confidence              55  4577999999999999843210   0    10    112333333332 3699999999999999998643   


Q ss_pred             ccCceeEecCCCCcCHHH
Q 020880          238 QMQLLLNVGGPDRVSRVQ  255 (320)
Q Consensus       238 ~~~~~~n~~~~~~~s~~e  255 (320)
                       .++.||++++...+..|
T Consensus       204 -~g~~~~~~~~~~~~~~~  220 (221)
T 3ew7_A          204 -LNEHFTVAGKLEHHHHH  220 (221)
T ss_dssp             -TTSEEECCC--------
T ss_pred             -cCCEEEECCCCcccccc
Confidence             35599999988776654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.98  E-value=6e-32  Score=222.22  Aligned_cols=214  Identities=10%  Similarity=0.063  Sum_probs=158.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |||||||||||||++++++|+++|   ++|+++.|++++...+.   ..+++++.+|++|+++  +.+.   ++|+|||+
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~---~~~~~~~~~D~~d~~~--~~~~---~~d~vi~~   69 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRG---HEVLAVVRDPQKAADRL---GATVATLVKEPLVLTE--ADLD---SVDAVVDA   69 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHT---CTTSEEEECCGGGCCH--HHHT---TCSEEEEC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCC---CEEEEEEeccccccccc---CCCceEEecccccccH--hhcc---cCCEEEEC
Confidence            479999999999999999999999   89999999866554332   3578899999999987  4444   89999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC----CCcccCCCCCcchHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS----FYKEEDEIAPVNVYGKSKVAAE  159 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~----~~~E~~~~~p~~~Y~~sK~~~e  159 (320)
                      ||....       ......|+.++. +++++|++.+ +++|++||+.++.....    +.+|...+.|.+.|+.+|...|
T Consensus        70 ag~~~~-------~~~~~~n~~~~~-~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e  140 (224)
T 3h2s_A           70 LSVPWG-------SGRGYLHLDFAT-HLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYY  140 (224)
T ss_dssp             CCCCTT-------SSCTHHHHHHHH-HHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHH
T ss_pred             CccCCC-------cchhhHHHHHHH-HHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHH
Confidence            997521       122567888885 9999999999 89999999876543322    4556666667889999999999


Q ss_pred             HHHH---HHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccc
Q 020880          160 KFIY---EKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED  236 (320)
Q Consensus       160 ~~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  236 (320)
                      .+..   ..+.+++++||+.+||++....    +.        .....+. .++..++++|++|+|++++.+++++..  
T Consensus       141 ~~~~~~~~~~i~~~ivrp~~v~g~~~~~~----~~--------~~~~~~~-~~~~~~~~i~~~DvA~~~~~~l~~~~~--  205 (224)
T 3h2s_A          141 EYQFLQMNANVNWIGISPSEAFPSGPATS----YV--------AGKDTLL-VGEDGQSHITTGNMALAILDQLEHPTA--  205 (224)
T ss_dssp             HHHHHTTCTTSCEEEEEECSBCCCCCCCC----EE--------EESSBCC-CCTTSCCBCCHHHHHHHHHHHHHSCCC--
T ss_pred             HHHHHHhcCCCcEEEEcCccccCCCcccC----ce--------ecccccc-cCCCCCceEeHHHHHHHHHHHhcCccc--
Confidence            6421   3467899999999999954211    10        0112222 234567899999999999999998543  


Q ss_pred             cccCceeEecCCCCcCHH
Q 020880          237 KQMQLLLNVGGPDRVSRV  254 (320)
Q Consensus       237 ~~~~~~~n~~~~~~~s~~  254 (320)
                        .+++|++++.+..+..
T Consensus       206 --~g~~~~~~~~~~~~~~  221 (224)
T 3h2s_A          206 --IRDRIVVRDADLEHHH  221 (224)
T ss_dssp             --TTSEEEEEECC-----
T ss_pred             --cCCEEEEecCcchhcc
Confidence              3459999987765543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.97  E-value=2.9e-31  Score=229.13  Aligned_cols=235  Identities=16%  Similarity=0.179  Sum_probs=171.6

Q ss_pred             CC-CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh--h---hhhhhCCCcceEEEeeCCCcccHHHHHHHh
Q 020880            1 MS-KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP--Q---LLLDALPHSFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         1 m~-~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~--~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      |+ ||+|+|||||||||++++++|+++|   ++|++++|+.+..  .   .+......+++++.+|++|++++.++++  
T Consensus         1 M~~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--   75 (313)
T 1qyd_A            1 MDKKSRVLIVGGTGYIGKRIVNASISLG---HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK--   75 (313)
T ss_dssp             -CCCCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT--
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHhCC---CcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh--
Confidence            65 7899999999999999999999999   8899999986431  1   1111113468889999999999988887  


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-CceEEEeechhhhcccCCCCcccCCCCC-cchHH
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-ENLLIHLSTDQVYEGVKSFYKEEDEIAP-VNVYG  152 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p-~~~Y~  152 (320)
                       ++|+|||+|+.....           .|+.++. +++++|++.+ +++||+ |   +||......  +.+..| ...| 
T Consensus        76 -~~d~vi~~a~~~~~~-----------~~~~~~~-~l~~aa~~~g~v~~~v~-S---~~g~~~~~~--~~~~~p~~~~y-  135 (313)
T 1qyd_A           76 -QVDVVISALAGGVLS-----------HHILEQL-KLVEAIKEAGNIKRFLP-S---EFGMDPDIM--EHALQPGSITF-  135 (313)
T ss_dssp             -TCSEEEECCCCSSSS-----------TTTTTHH-HHHHHHHHSCCCSEEEC-S---CCSSCTTSC--CCCCSSTTHHH-
T ss_pred             -CCCEEEECCccccch-----------hhHHHHH-HHHHHHHhcCCCceEEe-c---CCcCCcccc--ccCCCCCcchH-
Confidence             899999999865321           2666664 9999999998 999985 3   455322211  223334 4567 


Q ss_pred             HHHHHHHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec--CcccCceeHHHHHHHHHHHHh
Q 020880          153 KSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRDVVKIILALTN  230 (320)
Q Consensus       153 ~sK~~~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~a~~~~~~~~  230 (320)
                      .+|..+|+++++.+.+++++||+.++|+..........      .....+..+.+++  +..++|+|++|+|++++.++.
T Consensus       136 ~sK~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~  209 (313)
T 1qyd_A          136 IDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDG------HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSID  209 (313)
T ss_dssp             HHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTC------CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhcCCCeEEEEeceeccccccccccccc------cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHh
Confidence            99999999999999999999999998853211110000      0011234444444  357899999999999999998


Q ss_pred             hhhccccccCceeEecCC-CCcCHHHHHHHHHHHhCCCCCc
Q 020880          231 RWLSEDKQMQLLLNVGGP-DRVSRVQMAEVVAEIRGYSTSL  270 (320)
Q Consensus       231 ~~~~~~~~~~~~~n~~~~-~~~s~~e~~~~i~~~~~~~~~~  270 (320)
                      ++...    ++.|++.++ +.+|+.|+++.+.+.+|.+..+
T Consensus       210 ~~~~~----~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~  246 (313)
T 1qyd_A          210 DPQTL----NKTMYIRPPMNILSQKEVIQIWERLSEQNLDK  246 (313)
T ss_dssp             CGGGS----SSEEECCCGGGEEEHHHHHHHHHHHHTCCCEE
T ss_pred             CcccC----CceEEEeCCCCccCHHHHHHHHHHhcCCCCce
Confidence            75322    347887765 6899999999999999987543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.97  E-value=7.7e-31  Score=212.69  Aligned_cols=204  Identities=11%  Similarity=0.087  Sum_probs=157.9

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |++|+|+||||||+||++++++|+++|   ++|+++.|++++....   ...+++++.+|++|++++.++++   ++|+|
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~---~~d~v   71 (206)
T 1hdo_A            1 MAVKKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVRDSSRLPSE---GPRPAHVVVGDVLQAADVDKTVA---GQDAV   71 (206)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCGGGSCSS---SCCCSEEEESCTTSHHHHHHHHT---TCSEE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEeChhhcccc---cCCceEEEEecCCCHHHHHHHHc---CCCEE
Confidence            666899999999999999999999999   8999999986543221   13568889999999999888887   89999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK  160 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  160 (320)
                      ||+|+....    .++   .++|+.++. ++++++++.++++||++||..+|+.....      +.+...|+.+|..+|+
T Consensus        72 i~~a~~~~~----~~~---~~~n~~~~~-~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~------~~~~~~y~~~K~~~e~  137 (206)
T 1hdo_A           72 IVLLGTRND----LSP---TTVMSEGAR-NIVAAMKAHGVDKVVACTSAFLLWDPTKV------PPRLQAVTDDHIRMHK  137 (206)
T ss_dssp             EECCCCTTC----CSC---CCHHHHHHH-HHHHHHHHHTCCEEEEECCGGGTSCTTCS------CGGGHHHHHHHHHHHH
T ss_pred             EECccCCCC----CCc---cchHHHHHH-HHHHHHHHhCCCeEEEEeeeeeccCcccc------cccchhHHHHHHHHHH
Confidence            999997543    112   347888885 99999999999999999999999754321      1157789999999999


Q ss_pred             HHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcc-cCceeHHHHHHHHHHHHhhhhcccccc
Q 020880          161 FIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC-RCPVYVRDVVKIILALTNRWLSEDKQM  239 (320)
Q Consensus       161 ~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~~~~~~~~~~~~~  239 (320)
                      ++++.+.+++++||+.+ |++...   ..+.              ...+... .+++|++|+|++++.+++++.    ..
T Consensus       138 ~~~~~~i~~~~lrp~~~-~~~~~~---~~~~--------------~~~~~~~~~~~i~~~Dva~~~~~~~~~~~----~~  195 (206)
T 1hdo_A          138 VLRESGLKYVAVMPPHI-GDQPLT---GAYT--------------VTLDGRGPSRVISKHDLGHFMLRCLTTDE----YD  195 (206)
T ss_dssp             HHHHTCSEEEEECCSEE-ECCCCC---SCCE--------------EESSSCSSCSEEEHHHHHHHHHHTTSCST----TT
T ss_pred             HHHhCCCCEEEEeCCcc-cCCCCC---cceE--------------ecccCCCCCCccCHHHHHHHHHHHhcCcc----cc
Confidence            99998899999999997 443311   1110              0001111 489999999999999998743    23


Q ss_pred             CceeEecCCC
Q 020880          240 QLLLNVGGPD  249 (320)
Q Consensus       240 ~~~~n~~~~~  249 (320)
                      +++||+++++
T Consensus       196 g~~~~i~~g~  205 (206)
T 1hdo_A          196 GHSTYPSHQY  205 (206)
T ss_dssp             TCEEEEECCC
T ss_pred             ccceeeeccc
Confidence            5599999874

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.97  E-value=1.7e-30  Score=227.37  Aligned_cols=228  Identities=15%  Similarity=0.058  Sum_probs=170.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh--hhhhhhCCCcceEEEee-CCCcccHHHHHHHhCCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP--QLLLDALPHSFVFFDVD-LKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~D-l~d~~~~~~~~~~~~~~d~   79 (320)
                      +|+|||||||||||++|+++|+++|   ++|++++|++++.  ..+..  ..+++++.+| ++|++++.++++   ++|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~l~~--~~~v~~v~~D~l~d~~~l~~~~~---~~d~   76 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVG---HHVRAQVHSLKGLIAEELQA--IPNVTLFQGPLLNNVPLMDTLFE---GAHL   76 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCSCSHHHHHHHT--STTEEEEESCCTTCHHHHHHHHT---TCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEECCCChhhHHHHhh--cCCcEEEECCccCCHHHHHHHHh---cCCE
Confidence            5789999999999999999999999   8899999987764  22221  1357889999 999999988887   8999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-CceEEEeechh--hhcccCCCCcccCCCCCcchHHHHHH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-ENLLIHLSTDQ--VYEGVKSFYKEEDEIAPVNVYGKSKV  156 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~~~v~~Ss~~--vy~~~~~~~~E~~~~~p~~~Y~~sK~  156 (320)
                      |||+++...           ...|..+  .+++++|++.+ +++|||+||.+  .|+.           .+..+|+.+|.
T Consensus        77 Vi~~a~~~~-----------~~~~~~~--~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------~~~~~y~~sK~  132 (352)
T 1xgk_A           77 AFINTTSQA-----------GDEIAIG--KDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------WPAVPMWAPKF  132 (352)
T ss_dssp             EEECCCSTT-----------SCHHHHH--HHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------CCCCTTTHHHH
T ss_pred             EEEcCCCCC-----------cHHHHHH--HHHHHHHHHcCCccEEEEeCCccccccCC-----------CCCccHHHHHH
Confidence            999987431           1224444  49999999998 99999999986  3432           23467999999


Q ss_pred             HHHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCc-eEee--cCcccCceeH-HHHHHHHHHHHhhh
Q 020880          157 AAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEK-VEFF--HDECRCPVYV-RDVVKIILALTNRW  232 (320)
Q Consensus       157 ~~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~i~v-~D~a~~~~~~~~~~  232 (320)
                      .+|+++++.+.+++++||+ +||++........+.    ......+.. +.++  +++.++++|+ +|+|++++.+++++
T Consensus       133 ~~E~~~~~~gi~~~ivrpg-~~g~~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~  207 (352)
T 1xgk_A          133 TVENYVRQLGLPSTFVYAG-IYNNNFTSLPYPLFQ----MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG  207 (352)
T ss_dssp             HHHHHHHTSSSCEEEEEEC-EEGGGCBSSSCSSCB----EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHcCCCEEEEecc-eecCCchhccccccc----ccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCC
Confidence            9999999989999999976 688875322111110    000123332 2233  4578899999 89999999999874


Q ss_pred             hccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCc
Q 020880          233 LSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSL  270 (320)
Q Consensus       233 ~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~  270 (320)
                      ..  ...+++||+++ +.+|+.|+++.+.+.+|.+...
T Consensus       208 ~~--~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~~  242 (352)
T 1xgk_A          208 PQ--KWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTY  242 (352)
T ss_dssp             HH--HHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEE
T ss_pred             ch--hhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCce
Confidence            21  11245999985 6799999999999999987543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=4.1e-32  Score=221.80  Aligned_cols=206  Identities=16%  Similarity=0.090  Sum_probs=160.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|+|+||||||+||++++++|+++|+. ++|++++|++++.       ..+++++.+|++|++++.+++     +|+|||
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~-~~V~~~~r~~~~~-------~~~~~~~~~D~~~~~~~~~~~-----~d~vi~   71 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTL-AKVIAPARKALAE-------HPRLDNPVGPLAELLPQLDGS-----IDTAFC   71 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTC-CEEECCBSSCCCC-------CTTEECCBSCHHHHGGGCCSC-----CSEEEE
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCC-CeEEEEeCCCccc-------CCCceEEeccccCHHHHHHhh-----hcEEEE
Confidence            579999999999999999999999931 1999999987651       245677889999887765543     899999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI  162 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  162 (320)
                      +|+....  ...+++..+++|+.++. ++++++++.++++||++||..+|+.            |.+.|+.+|..+|+++
T Consensus        72 ~a~~~~~--~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~v~~Ss~~~~~~------------~~~~y~~sK~~~e~~~  136 (215)
T 2a35_A           72 CLGTTIK--EAGSEEAFRAVDFDLPL-AVGKRALEMGARHYLVVSALGADAK------------SSIFYNRVKGELEQAL  136 (215)
T ss_dssp             CCCCCHH--HHSSHHHHHHHHTHHHH-HHHHHHHHTTCCEEEEECCTTCCTT------------CSSHHHHHHHHHHHHH
T ss_pred             Ceeeccc--cCCCHHHHHHhhHHHHH-HHHHHHHHcCCCEEEEECCcccCCC------------CccHHHHHHHHHHHHH
Confidence            9997532  23467888999999995 9999999999999999999999863            4568999999999999


Q ss_pred             HHHcCC-eeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCc
Q 020880          163 YEKCSN-FAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL  241 (320)
Q Consensus       163 ~~~~~~-~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  241 (320)
                      ++.+.+ ++++||+.+||+....    .+    +.. +. +....+ +++.++++|++|+|++++.+++++.      ++
T Consensus       137 ~~~~~~~~~~vrp~~v~g~~~~~----~~----~~~-~~-~~~~~~-~~~~~~~i~~~Dva~~~~~~~~~~~------~~  199 (215)
T 2a35_A          137 QEQGWPQLTIARPSLLFGPREEF----RL----AEI-LA-APIARI-LPGKYHGIEACDLARALWRLALEEG------KG  199 (215)
T ss_dssp             TTSCCSEEEEEECCSEESTTSCE----EG----GGG-TT-CCCC-----CHHHHHHHHHHHHHHHHHHTCCC------SE
T ss_pred             HHcCCCeEEEEeCceeeCCCCcc----hH----HHH-HH-Hhhhhc-cCCCcCcEeHHHHHHHHHHHHhcCC------CC
Confidence            998888 9999999999997531    11    111 11 111111 2346789999999999999998742      45


Q ss_pred             eeEecCCCCcCH
Q 020880          242 LLNVGGPDRVSR  253 (320)
Q Consensus       242 ~~n~~~~~~~s~  253 (320)
                      +||+++++..++
T Consensus       200 ~~~i~~~~~~~~  211 (215)
T 2a35_A          200 VRFVESDELRKL  211 (215)
T ss_dssp             EEEEEHHHHHHH
T ss_pred             ceEEcHHHHHHh
Confidence            899988665444

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.97  E-value=4.8e-30  Score=222.01  Aligned_cols=269  Identities=10%  Similarity=0.123  Sum_probs=187.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-ChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-LPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ++|+||||||+||++++++|+++|   ++|++++|+.+ +...+......+++++.+|++|++++.++++   ++|+|||
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~---~~d~vi~   85 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLG---HPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK---KVDVVIS   85 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTT---CCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT---TCSEEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCC---CcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc---CCCEEEE
Confidence            589999999999999999999999   88999999875 3222211112468889999999999988887   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhcc-CceEEEeechhhhcccCCCCcccCCCCC-cchHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-ENLLIHLSTDQVYEGVKSFYKEEDEIAP-VNVYGKSKVAAEK  160 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p-~~~Y~~sK~~~e~  160 (320)
                      +|+...               +.++ .+++++|++.+ +++||+ |   +||..   .+|.++..| ...| .+|..+|+
T Consensus        86 ~a~~~~---------------~~~~-~~l~~aa~~~g~v~~~v~-S---~~g~~---~~~~~~~~p~~~~y-~sK~~~e~  141 (318)
T 2r6j_A           86 ALAFPQ---------------ILDQ-FKILEAIKVAGNIKRFLP-S---DFGVE---EDRINALPPFEALI-ERKRMIRR  141 (318)
T ss_dssp             CCCGGG---------------STTH-HHHHHHHHHHCCCCEEEC-S---CCSSC---TTTCCCCHHHHHHH-HHHHHHHH
T ss_pred             CCchhh---------------hHHH-HHHHHHHHhcCCCCEEEe-e---ccccC---cccccCCCCcchhH-HHHHHHHH
Confidence            998531               3344 49999999998 989985 3   35532   233334444 3467 99999999


Q ss_pred             HHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHhhhhccccc
Q 020880          161 FIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRWLSEDKQ  238 (320)
Q Consensus       161 ~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~~  238 (320)
                      ++++.+.+++++||+.+++..         ...++.. ...+..+.++++  ..++|+|++|+|++++.++.++...   
T Consensus       142 ~~~~~~~~~~~lr~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~---  208 (318)
T 2r6j_A          142 AIEEANIPYTYVSANCFASYF---------INYLLRP-YDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRAL---  208 (318)
T ss_dssp             HHHHTTCCBEEEECCEEHHHH---------HHHHHCT-TCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGT---
T ss_pred             HHHhcCCCeEEEEcceehhhh---------hhhhccc-cCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcccc---
Confidence            999999999999999887641         1111111 113445556554  5789999999999999999875322   


Q ss_pred             cCceeEecC-CCCcCHHHHHHHHHHHhCCCCCccccCCccccC-----CC---------------CCCCCccccCh--HH
Q 020880          239 MQLLLNVGG-PDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD-----RG---------------VQSPADISMDI--TK  295 (320)
Q Consensus       239 ~~~~~n~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~-----~~---------------~~~~~~~~~d~--~k  295 (320)
                       ++.|++.+ ++.+|+.|+++.+.+.+|.+..+. ..+...+.     ..               ......+.++.  ..
T Consensus       209 -~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (318)
T 2r6j_A          209 -NRVVIYRPSTNIITQLELISRWEKKIGKKFKKI-HVPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFKENDVE  286 (318)
T ss_dssp             -TEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEE-EECHHHHHHHHHHSCTTTHHHHHHHHHHHTSCTTTSSCCCTTCEE
T ss_pred             -CeEEEecCCCCccCHHHHHHHHHHHhCCCCcee-ecCHHHHHHHHhcCCCcchhhhheeeeEEecCCCCCCCcccccch
Confidence             34778765 478999999999999999876432 22211100     00               00001122222  13


Q ss_pred             HHhhc-CCCccCHHHHHHHHHhh
Q 020880          296 LVQTL-NIDPVTYKDGVKLTLAA  317 (320)
Q Consensus       296 ~~~~l-g~~~~~~~~~l~~~i~~  317 (320)
                      +++.+ |.++++++|.+++.++.
T Consensus       287 ~~~~~p~~~~~~~~~~l~~~~~~  309 (318)
T 2r6j_A          287 ASTLYPELKFTTIDELLDIFVHD  309 (318)
T ss_dssp             GGGTCTTCCCCCHHHHHHHHHHS
T ss_pred             HHHhCCCCccccHHHHHHHHhcC
Confidence            44545 78889999999988754

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.96  E-value=1.3e-29  Score=210.80  Aligned_cols=200  Identities=16%  Similarity=0.130  Sum_probs=155.2

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCc--eEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPY--DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      |++|+||||||||+||++++++|+++|   +  +|++++|++++......   ..+.++.+|++|++++.++++   ++|
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G---~~~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~---~~d   86 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQG---LFSKVTLIGRRKLTFDEEAY---KNVNQEVVDFEKLDDYASAFQ---GHD   86 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHT---CCSEEEEEESSCCCCCSGGG---GGCEEEECCGGGGGGGGGGGS---SCS
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCC---CCCEEEEEEcCCCCcccccc---CCceEEecCcCCHHHHHHHhc---CCC
Confidence            346799999999999999999999999   7  89999998765433221   257789999999999888776   899


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHH
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAA  158 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~  158 (320)
                      +||||||.....   .+++..+++|+.++. ++++++++.++++||++||.++|+.            +.+.|+.+|...
T Consensus        87 ~vi~~ag~~~~~---~~~~~~~~~n~~~~~-~~~~~~~~~~~~~iv~~SS~~~~~~------------~~~~Y~~sK~~~  150 (242)
T 2bka_A           87 VGFCCLGTTRGK---AGAEGFVRVDRDYVL-KSAELAKAGGCKHFNLLSSKGADKS------------SNFLYLQVKGEV  150 (242)
T ss_dssp             EEEECCCCCHHH---HHHHHHHHHHTHHHH-HHHHHHHHTTCCEEEEECCTTCCTT------------CSSHHHHHHHHH
T ss_pred             EEEECCCccccc---CCcccceeeeHHHHH-HHHHHHHHCCCCEEEEEccCcCCCC------------CcchHHHHHHHH
Confidence            999999975322   235678899999995 9999999998889999999998863            346899999999


Q ss_pred             HHHHHHHcCC-eeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhh
Q 020880          159 EKFIYEKCSN-FAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL  233 (320)
Q Consensus       159 e~~~~~~~~~-~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  233 (320)
                      |.+++.++.+ ++++||+.+||+....    . ....+........+. ..  +...+++++|+|++++.++.++.
T Consensus       151 e~~~~~~~~~~~~~vrpg~v~~~~~~~----~-~~~~~~~~~~~~~~~-~~--~~~~~~~~~dva~~~~~~~~~~~  218 (242)
T 2bka_A          151 EAKVEELKFDRYSVFRPGVLLCDRQES----R-PGEWLVRKFFGSLPD-SW--ASGHSVPVVTVVRAMLNNVVRPR  218 (242)
T ss_dssp             HHHHHTTCCSEEEEEECCEEECTTGGG----S-HHHHHHHHHHCSCCT-TG--GGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             HHHHHhcCCCCeEEEcCceecCCCCCC----c-HHHHHHHHhhcccCc-cc--cCCcccCHHHHHHHHHHHHhCcc
Confidence            9999999884 9999999999996521    1 112222222222111 11  12358999999999999998753

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.96  E-value=2.4e-29  Score=216.64  Aligned_cols=229  Identities=15%  Similarity=0.172  Sum_probs=170.0

Q ss_pred             CC-CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh---hh--hhhh-CCCcceEEEeeCCCcccHHHHHHH
Q 020880            1 MS-KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP---QL--LLDA-LPHSFVFFDVDLKSGSGFDAVALK   73 (320)
Q Consensus         1 m~-~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~---~~--~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~   73 (320)
                      |+ ||+|+|||||||||+++++.|+++|   ++|++++|+.+..   ..  .... ...+++++.+|++|++++.++++ 
T Consensus         1 M~~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-   76 (308)
T 1qyc_A            1 MGSRSRILLIGATGYIGRHVAKASLDLG---HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-   76 (308)
T ss_dssp             -CCCCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHhCC---CCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-
Confidence            66 7899999999999999999999999   8899999986432   11  1111 13468889999999999999888 


Q ss_pred             hCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-CceEEEeechhhhcccCCCCcccCCCCC-cchH
Q 020880           74 FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-ENLLIHLSTDQVYEGVKSFYKEEDEIAP-VNVY  151 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p-~~~Y  151 (320)
                        ++|+|||+|+...               +.++ .+++++|++.+ +++||+ |   +||..   .+|.++..| ...|
T Consensus        77 --~~d~vi~~a~~~~---------------~~~~-~~l~~aa~~~g~v~~~v~-S---~~g~~---~~~~~~~~p~~~~y  131 (308)
T 1qyc_A           77 --NVDVVISTVGSLQ---------------IESQ-VNIIKAIKEVGTVKRFFP-S---EFGND---VDNVHAVEPAKSVF  131 (308)
T ss_dssp             --TCSEEEECCCGGG---------------SGGG-HHHHHHHHHHCCCSEEEC-S---CCSSC---TTSCCCCTTHHHHH
T ss_pred             --CCCEEEECCcchh---------------hhhH-HHHHHHHHhcCCCceEee-c---ccccC---ccccccCCcchhHH
Confidence              8999999998531               3344 49999999998 999984 4   35432   234444455 3567


Q ss_pred             HHHHHHHHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHH
Q 020880          152 GKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALT  229 (320)
Q Consensus       152 ~~sK~~~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~  229 (320)
                       .+|..+|+++++.+.+++++||+.++|+.........       .....+..+.++++  ..++|+|++|+|++++.++
T Consensus       132 -~sK~~~e~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l  203 (308)
T 1qyc_A          132 -EVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAG-------LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAV  203 (308)
T ss_dssp             -HHHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTT-------CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTS
T ss_pred             -HHHHHHHHHHHhcCCCeEEEEeceecccccccccccc-------ccCCCCCceEEecCCCceEEEecHHHHHHHHHHHH
Confidence             9999999999999999999999999886432111100       00113445556554  5789999999999999999


Q ss_pred             hhhhccccccCceeEecCC-CCcCHHHHHHHHHHHhCCCCCc
Q 020880          230 NRWLSEDKQMQLLLNVGGP-DRVSRVQMAEVVAEIRGYSTSL  270 (320)
Q Consensus       230 ~~~~~~~~~~~~~~n~~~~-~~~s~~e~~~~i~~~~~~~~~~  270 (320)
                      .++...    +++|++.++ +.+|+.|+++.+.+.+|.+..+
T Consensus       204 ~~~~~~----~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~  241 (308)
T 1qyc_A          204 DDPRTL----NKTLYLRLPANTLSLNELVALWEKKIDKTLEK  241 (308)
T ss_dssp             SCGGGT----TEEEECCCGGGEEEHHHHHHHHHHHTTSCCEE
T ss_pred             hCcccc----CeEEEEeCCCCccCHHHHHHHHHHHhCCCCce
Confidence            875322    447888764 6899999999999999987643

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.96  E-value=1.3e-28  Score=211.96  Aligned_cols=227  Identities=15%  Similarity=0.168  Sum_probs=167.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-------CChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-------PLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      ||+|+|||||||||++++++|+++|   ++|++++|++       ++...+......+++++.+|++|++++.++++   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~---   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAG---NPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK---   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHT---CCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT---
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCC---CcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh---
Confidence            6789999999999999999999999   7899999986       21111111012467889999999999988887   


Q ss_pred             CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-CceEEEeechhhhcccCCCCcccCCCCC-cchHHH
Q 020880           76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-ENLLIHLSTDQVYEGVKSFYKEEDEIAP-VNVYGK  153 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p-~~~Y~~  153 (320)
                      ++|+|||+|+...               +.++ .+++++|++.+ +++||+ |   +||..   .+|..+..| .+.| .
T Consensus        76 ~~d~vi~~a~~~~---------------~~~~-~~l~~aa~~~g~v~~~v~-S---~~g~~---~~~~~~~~p~~~~y-~  131 (307)
T 2gas_A           76 QVDIVICAAGRLL---------------IEDQ-VKIIKAIKEAGNVKKFFP-S---EFGLD---VDRHDAVEPVRQVF-E  131 (307)
T ss_dssp             TCSEEEECSSSSC---------------GGGH-HHHHHHHHHHCCCSEEEC-S---CCSSC---TTSCCCCTTHHHHH-H
T ss_pred             CCCEEEECCcccc---------------cccH-HHHHHHHHhcCCceEEee-c---ccccC---cccccCCCcchhHH-H
Confidence            8999999998642               3344 48999999998 999983 3   35532   233344445 4578 9


Q ss_pred             HHHHHHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHhh
Q 020880          154 SKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNR  231 (320)
Q Consensus       154 sK~~~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~~  231 (320)
                      +|..+|+++++.+.+++++||+.++|+.........       .....+..+.++++  ..++++|++|+|++++.++.+
T Consensus       132 sK~~~e~~~~~~~i~~~~lrp~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~  204 (307)
T 2gas_A          132 EKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLD-------ATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAAND  204 (307)
T ss_dssp             HHHHHHHHHHHHTCCBEEEECCEETTTTGGGTTCTT-------CSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCCCeEEEEcceeeccccccccccc-------cccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcC
Confidence            999999999999999999999999886432111000       00113345555553  578999999999999999987


Q ss_pred             hhccccccCceeEecCC-CCcCHHHHHHHHHHHhCCCCCc
Q 020880          232 WLSEDKQMQLLLNVGGP-DRVSRVQMAEVVAEIRGYSTSL  270 (320)
Q Consensus       232 ~~~~~~~~~~~~n~~~~-~~~s~~e~~~~i~~~~~~~~~~  270 (320)
                      +...    ++.|++.++ +.+|+.|+++.+.+.+|.+..+
T Consensus       205 ~~~~----~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~  240 (307)
T 2gas_A          205 PNTL----NKAVHIRLPKNYLTQNEVIALWEKKIGKTLEK  240 (307)
T ss_dssp             GGGT----TEEEECCCGGGEEEHHHHHHHHHHHHTSCCEE
T ss_pred             cccc----CceEEEeCCCCcCCHHHHHHHHHHHhCCCCce
Confidence            5322    347777654 6899999999999999987543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.96  E-value=1e-28  Score=213.99  Aligned_cols=225  Identities=11%  Similarity=0.160  Sum_probs=167.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-CC-----hhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PL-----PQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-~~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      ||+|+||||||+||++++++|+++|   ++|++++|+. +.     ...+......+++++.+|++|++++.++++   +
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~---~   77 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFS---HPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK---Q   77 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT---T
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCC---CcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc---C
Confidence            5789999999999999999999999   8899999986 21     111111012468889999999999988887   8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-CceEEEeechhhhcccCCCCcccCCCCC-cchHHHH
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-ENLLIHLSTDQVYEGVKSFYKEEDEIAP-VNVYGKS  154 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p-~~~Y~~s  154 (320)
                      +|+|||+|+...               +.++ .+++++|++.+ +++||+ |   +||..   .+|..+..| .+.| .+
T Consensus        78 ~d~vi~~a~~~~---------------~~~~-~~l~~aa~~~g~v~~~v~-S---~~g~~---~~~~~~~~p~~~~y-~s  133 (321)
T 3c1o_A           78 VDIVISALPFPM---------------ISSQ-IHIINAIKAAGNIKRFLP-S---DFGCE---EDRIKPLPPFESVL-EK  133 (321)
T ss_dssp             CSEEEECCCGGG---------------SGGG-HHHHHHHHHHCCCCEEEC-S---CCSSC---GGGCCCCHHHHHHH-HH
T ss_pred             CCEEEECCCccc---------------hhhH-HHHHHHHHHhCCccEEec-c---ccccC---ccccccCCCcchHH-HH
Confidence            999999998531               3344 49999999998 999983 3   35532   233344444 4578 99


Q ss_pred             HHHHHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHH--HHhcCCceEeec--CcccCceeHHHHHHHHHHHHh
Q 020880          155 KVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDS--VLSKGEKVEFFH--DECRCPVYVRDVVKIILALTN  230 (320)
Q Consensus       155 K~~~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~i~v~D~a~~~~~~~~  230 (320)
                      |..+|+++++.+.+++++||+.++|+..         ..++..  ....+..+.+++  +..++|+|++|+|++++.++.
T Consensus       134 K~~~e~~~~~~~~~~~~lrp~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~  204 (321)
T 3c1o_A          134 KRIIRRAIEAAALPYTYVSANCFGAYFV---------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVAC  204 (321)
T ss_dssp             HHHHHHHHHHHTCCBEEEECCEEHHHHH---------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCeEEEEeceeccccc---------cccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHh
Confidence            9999999999999999999999987521         011100  011234455554  457899999999999999998


Q ss_pred             hhhccccccCceeEecC-CCCcCHHHHHHHHHHHhCCCCCc
Q 020880          231 RWLSEDKQMQLLLNVGG-PDRVSRVQMAEVVAEIRGYSTSL  270 (320)
Q Consensus       231 ~~~~~~~~~~~~~n~~~-~~~~s~~e~~~~i~~~~~~~~~~  270 (320)
                      ++...    +++|++.+ ++.+|+.|+++.+.+.+|.+..+
T Consensus       205 ~~~~~----g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~  241 (321)
T 3c1o_A          205 DPRCC----NRIVIYRPPKNIISQNELISLWEAKSGLSFKK  241 (321)
T ss_dssp             CGGGT----TEEEECCCGGGEEEHHHHHHHHHHHHTSCCCE
T ss_pred             Ccccc----CeEEEEeCCCCcccHHHHHHHHHHHcCCccee
Confidence            75332    44788876 47899999999999999987653

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.95  E-value=1.2e-27  Score=196.19  Aligned_cols=205  Identities=13%  Similarity=0.078  Sum_probs=151.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHh-hccCCCceEEEecCCCC-ChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLS-EIEGKPYDVAATHHSTP-LPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~-~~g~~v~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      ||||+|+||||||+||++++++|+ ++|   ++|+++.|+++ +...+.. ...++.++.+|++|++++.++++   ++|
T Consensus         3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g---~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~---~~d   75 (221)
T 3r6d_A            3 AMYXYITILGAAGQIAQXLTATLLTYTD---MHITLYGRQLKTRIPPEII-DHERVTVIEGSFQNPGXLEQAVT---NAE   75 (221)
T ss_dssp             CSCSEEEEESTTSHHHHHHHHHHHHHCC---CEEEEEESSHHHHSCHHHH-TSTTEEEEECCTTCHHHHHHHHT---TCS
T ss_pred             ceEEEEEEEeCCcHHHHHHHHHHHhcCC---ceEEEEecCccccchhhcc-CCCceEEEECCCCCHHHHHHHHc---CCC
Confidence            345669999999999999999999 899   89999999866 4443321 24578889999999999988887   899


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHH
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAA  158 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~  158 (320)
                      +|||+||..               |+. + .++++++++.++++||++||..+|+.......+.......+.|+.+|..+
T Consensus        76 ~vv~~ag~~---------------n~~-~-~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~  138 (221)
T 3r6d_A           76 VVFVGAMES---------------GSD-M-ASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQA  138 (221)
T ss_dssp             EEEESCCCC---------------HHH-H-HHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             EEEEcCCCC---------------Chh-H-HHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHH
Confidence            999999853               222 3 59999999999999999999999975433222211111122799999999


Q ss_pred             HHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC-cccCceeHHHHHHHHHHHH--hhhhcc
Q 020880          159 EKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCPVYVRDVVKIILALT--NRWLSE  235 (320)
Q Consensus       159 e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~--~~~~~~  235 (320)
                      |.+++..+.+++++||+.++++......                 .....+. ....+++.+|+|++++.++  ..+.  
T Consensus       139 e~~~~~~~i~~~~vrpg~v~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~--  199 (221)
T 3r6d_A          139 RNVLRESNLNYTILRLTWLYNDPEXTDY-----------------ELIPEGAQFNDAQVSREAVVKAIFDILHAADET--  199 (221)
T ss_dssp             HHHHHHSCSEEEEEEECEEECCTTCCCC-----------------EEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCG--
T ss_pred             HHHHHhCCCCEEEEechhhcCCCCCcce-----------------eeccCCccCCCceeeHHHHHHHHHHHHHhcChh--
Confidence            9999999999999999999987321110                 0000011 1224799999999999999  6643  


Q ss_pred             ccccCceeEecCCC
Q 020880          236 DKQMQLLLNVGGPD  249 (320)
Q Consensus       236 ~~~~~~~~n~~~~~  249 (320)
                       ...++.+.++++.
T Consensus       200 -~~~~~~~~i~~~~  212 (221)
T 3r6d_A          200 -PFHRTSIGVGEPG  212 (221)
T ss_dssp             -GGTTEEEEEECTT
T ss_pred             -hhhcceeeecCCC
Confidence             2335577777653

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.95  E-value=2.4e-27  Score=201.13  Aligned_cols=238  Identities=12%  Similarity=0.115  Sum_probs=173.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC--CcceEEEeeCCCcccHHHHHHH----hC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--HSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      .+|+||||||+|+||++++++|+++|   ++|+++.|+.+......+.+.  .++.++.+|++|++++.++++.    ++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYG---AKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999   899999998655444333322  2678899999999998877753    45


Q ss_pred             CCCEEEECCCccCcc------ccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCcccCCC
Q 020880           76 QPDVVVNCAALSVPR------VCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++|+|||+||.....      .+..+++..+++|+.+++ ++++++..    .+.++||++||...|....         
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------  161 (278)
T 2bgk_A           92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAF-LVAKHAARVMIPAKKGSIVFTASISSFTAGE---------  161 (278)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHGGGTCEEEEEECCGGGTCCCT---------
T ss_pred             CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHhhcCCCeEEEEeeccccCCCC---------
Confidence            899999999975321      122345678899999986 77777654    3566999999999886432         


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...|.+++.+       +.++.++||+.++++........ . ......... ..+     .....++++
T Consensus       162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~-~~~~~~~~~-~~~-----~~~~~~~~~  233 (278)
T 2bgk_A          162 GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV-D-SSRVEELAH-QAA-----NLKGTLLRA  233 (278)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC-C-HHHHHHHHH-HTC-----SSCSCCCCH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhccc-c-hhHHHHhhh-ccc-----ccccccCCH
Confidence            24668999999999988764       45678999999999864322111 1 112222111 111     112458999


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHH
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAE  262 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~  262 (320)
                      +|+|++++.++.....  ...+.+|++.+|...++.|+++.+.+
T Consensus       234 ~dva~~~~~l~~~~~~--~~~G~~~~v~gg~~~~~~e~~~~i~~  275 (278)
T 2bgk_A          234 EDVADAVAYLAGDESK--YVSGLNLVIDGGYTRTNPAFPTALKH  275 (278)
T ss_dssp             HHHHHHHHHHHSGGGT--TCCSCEEEESTTGGGCCTHHHHHSCS
T ss_pred             HHHHHHHHHHcCcccc--cCCCCEEEECCcccccCCccchhhhh
Confidence            9999999999875421  12356999999999999999988754

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.95  E-value=2.3e-27  Score=201.57  Aligned_cols=244  Identities=18%  Similarity=0.141  Sum_probs=174.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      ++|+||||||+|+||++++++|+++|   ++|+++.|+.++...+....+..+.++.+|++|++++.++++.    ++++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAG---DTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRV   80 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence            36899999999999999999999999   8999999998887777776667889999999999988776653    4689


Q ss_pred             CEEEECCCccCc----cccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           78 DVVVNCAALSVP----RVCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        78 d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      |+|||+||....    ..+..+++..+++|+.+++   ..+++.+++.+..+||++||...+.+          ..+.+.
T Consensus        81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~~~~~  150 (281)
T 3m1a_A           81 DVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS----------FAGFSA  150 (281)
T ss_dssp             SEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC----------CTTCHH
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC----------CCCchH
Confidence            999999997643    2223445678899999953   24555556667779999999887643          235779


Q ss_pred             HHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCC---CCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          151 YGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPV---PKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      |+.||...|.+.+.+       +.++.++||+.+.++......   ..... .+..... ....+. ......++++++|
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~-~~~~~~~~~~~~d  227 (281)
T 3m1a_A          151 YSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENP-AYAEKVG-PTRQLV-QGSDGSQPGDPAK  227 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCT-TTHHHHH-HHHHHH-HC-----CBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcch-hhHHHhH-HHHHHH-hhccCCCCCCHHH
Confidence            999999999987764       346788999999876432110   00000 0111100 000100 0112346789999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGY  266 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~  266 (320)
                      +|++++.+++.+..     +..|+++++....+.+....+.+.++.
T Consensus       228 va~a~~~~~~~~~~-----~~~~~l~s~~~~~i~g~~~~i~~~~~~  268 (281)
T 3m1a_A          228 AAAAIRLALDTEKT-----PLRLALGGDAVDFLTGHLDSVRAELTE  268 (281)
T ss_dssp             HHHHHHHHHHSSSC-----CSEEEESHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCC-----CeEEecCchHHHHHHHHHHHHHHHHHH
Confidence            99999999988543     348999988777888888877776553

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=1.3e-28  Score=206.28  Aligned_cols=224  Identities=14%  Similarity=0.077  Sum_probs=161.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh-CCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF-GQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~d~Vi   81 (320)
                      ||+||||||||+||++++++|+++|   ++|++++|++++...         . +.+|++|++++.++++.+ +++|+||
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~---------~-~~~D~~~~~~~~~~~~~~~~~~d~vi   67 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAG---HTVIGIDRGQADIEA---------D-LSTPGGRETAVAAVLDRCGGVLDGLV   67 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSSSEEC---------C-TTSHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEeCChhHccc---------c-ccCCcccHHHHHHHHHHcCCCccEEE
Confidence            5789999999999999999999999   899999998655321         1 578999999998888766 5899999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhc----cCceEEEeechhhhcccCC--CC-------cccC-----
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN----KENLLIHLSTDQVYEGVKS--FY-------KEED-----  143 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~--~~-------~E~~-----  143 (320)
                      |+||....   ..+++..+++|+.+++ ++++++.+.    +.+++|++||..+|+....  +.       +|+.     
T Consensus        68 ~~Ag~~~~---~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (255)
T 2dkn_A           68 CCAGVGVT---AANSGLVVAVNYFGVS-ALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELA  143 (255)
T ss_dssp             ECCCCCTT---SSCHHHHHHHHTHHHH-HHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHH
T ss_pred             ECCCCCCc---chhHHHHHHHHhHHHH-HHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhc
Confidence            99997642   2357889999999996 888876543    5679999999999875421  11       1111     


Q ss_pred             --CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          144 --EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       144 --~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                        ...+.+.|+.+|...|.+++.+       +.+++++||+.++|+...........    ......     +.+ ..++
T Consensus       144 ~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~----~~~~~~-----~~~-~~~~  213 (255)
T 2dkn_A          144 EQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRY----GESTRR-----FVA-PLGR  213 (255)
T ss_dssp             HHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTT----HHHHHS-----CCC-TTSS
T ss_pred             cccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhh----HHHHHH-----HHH-HhcC
Confidence              1246778999999999988764       56789999999998743100000000    000100     002 3457


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHH
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ  255 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e  255 (320)
                      +++++|+|++++.++..+..  ...+.+||+++|..++++|
T Consensus       214 ~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          214 GSEPREVAEAIAFLLGPQAS--FIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             CBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTHHHHHCT
T ss_pred             CCCHHHHHHHHHHHhCCCcc--cceeeEEEecCCeEeeeec
Confidence            89999999999999987421  1235599999987666554

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.95  E-value=3.4e-27  Score=197.68  Aligned_cols=224  Identities=17%  Similarity=0.156  Sum_probs=163.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+|+||||||+|+||++++++|+++|   ++|+++.|+++....+.+.   .+..+.++.+|++|++++.++++.    +
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999   8999999986554433322   245678899999999988877753    4


Q ss_pred             CCCCEEEECCCccCcc---ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           75 GQPDVVVNCAALSVPR---VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +++|+|||+||.....   .+..+++..+++|+.+++ ++++++.    +.+.++||++||...+.+.          .+
T Consensus        87 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~  155 (255)
T 1fmc_A           87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFF-HLSQLVAPEMEKNGGGVILTITSMAAENKN----------IN  155 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTCCC----------TT
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCcEEEEEcchhhcCCC----------CC
Confidence            5899999999976442   223345678899999986 7777764    4566799999999887532          24


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...|.+++.+       +.++.++||+.++++.....    ....+..... .+.++       ..+++++|
T Consensus       156 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~-~~~~~-------~~~~~~~d  223 (255)
T 1fmc_A          156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV----ITPEIEQKML-QHTPI-------RRLGQPQD  223 (255)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT----CCHHHHHHHH-HTCSS-------CSCBCHHH
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc----cChHHHHHHH-hcCCc-------ccCCCHHH
Confidence            678999999999987764       34678899999998743211    1112222222 23222       34789999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCcCH
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR  253 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~  253 (320)
                      +|++++.++.....  ...+.+||+++|..+|+
T Consensus       224 va~~~~~l~~~~~~--~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          224 IANAALFLCSPAAS--WVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             HHHHHHHHHSGGGT--TCCSCEEEESTTSCCCC
T ss_pred             HHHHHHHHhCCccc--cCCCcEEEECCceeccC
Confidence            99999999875422  12355999999887764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.95  E-value=2.2e-27  Score=197.48  Aligned_cols=221  Identities=17%  Similarity=0.107  Sum_probs=161.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+||||||+|+||++++++|+++|   ++|+++.|+.+....+.... .+++++.+|++|++++.++++.++++|+||
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASG---AKVVAVTRTNSDLVSLAKEC-PGIEPVCVDLGDWDATEKALGGIGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHS-TTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHhc-cCCCcEEecCCCHHHHHHHHHHcCCCCEEE
Confidence            46899999999999999999999999   89999999876555444433 346778999999999999988666799999


Q ss_pred             ECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh----cc-CceEEEeechhhhcccCCCCcccCCCCCcchHH
Q 020880           82 NCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE----NK-ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYG  152 (320)
Q Consensus        82 h~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~  152 (320)
                      |+||.....    ....+++..+++|+.+++ ++++++.+    .+ .++||++||...|.+.          .+...|+
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y~  150 (244)
T 1cyd_A           82 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVF-QVSQMVARDMINRGVPGSIVNVSSMVAHVTF----------PNLITYS  150 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----------TTBHHHH
T ss_pred             ECCcccCCCCcccCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHhCCCCeEEEEEcchhhcCCC----------CCcchhH
Confidence            999976432    122345678899999986 77777654    34 5699999999887642          2367899


Q ss_pred             HHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHH
Q 020880          153 KSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII  225 (320)
Q Consensus       153 ~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  225 (320)
                      .+|...|.+++.+       +.++.++||+.++++.......   ...++.... .+.       ..+++++++|+|+++
T Consensus       151 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~-~~~-------~~~~~~~~~dva~~~  219 (244)
T 1cyd_A          151 STKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA---DPEFARKLK-ERH-------PLRKFAEVEDVVNSI  219 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC---CHHHHHHHH-HHS-------TTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccccc---CHHHHHHHH-hcC-------CccCCCCHHHHHHHH
Confidence            9999999988764       3457889999999875311000   111222222 121       235789999999999


Q ss_pred             HHHHhhhhccccccCceeEecCCCC
Q 020880          226 LALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +.++..+...  ..+..+++.+|..
T Consensus       220 ~~l~~~~~~~--~~G~~~~v~gG~~  242 (244)
T 1cyd_A          220 LFLLSDRSAS--TSGGGILVDAGYL  242 (244)
T ss_dssp             HHHHSGGGTT--CCSSEEEESTTGG
T ss_pred             HHHhCchhhc--ccCCEEEECCCcc
Confidence            9999764321  2345888887743

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.95  E-value=4.6e-27  Score=194.55  Aligned_cols=203  Identities=15%  Similarity=0.163  Sum_probs=142.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |+||+||||||||+||++++++|+++|.  ++|+++.|++++...+   ....+.++.+|++|++++.++++   ++|+|
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~--~~V~~~~R~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~---~~D~v   92 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQT--IKQTLFARQPAKIHKP---YPTNSQIIMGDVLNHAALKQAMQ---GQDIV   92 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTT--EEEEEEESSGGGSCSS---CCTTEEEEECCTTCHHHHHHHHT---TCSEE
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCC--ceEEEEEcChhhhccc---ccCCcEEEEecCCCHHHHHHHhc---CCCEE
Confidence            5688999999999999999999999984  6899999986654332   23468889999999999998887   89999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC---CCcccCCCCCcchHHHHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS---FYKEEDEIAPVNVYGKSKVA  157 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~---~~~E~~~~~p~~~Y~~sK~~  157 (320)
                      ||+|+....       .       ..+ .++++++++.++++||++||..+|+....   +.+|..+..+...|    ..
T Consensus        93 v~~a~~~~~-------~-------~~~-~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  153 (236)
T 3qvo_A           93 YANLTGEDL-------D-------IQA-NSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPF----RR  153 (236)
T ss_dssp             EEECCSTTH-------H-------HHH-HHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHH----HH
T ss_pred             EEcCCCCch-------h-------HHH-HHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHH----HH
Confidence            999985211       1       112 48899999999999999999999986544   23333333334444    45


Q ss_pred             HHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhcccc
Q 020880          158 AEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK  237 (320)
Q Consensus       158 ~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~  237 (320)
                      +|+.++..+.+++++||+.++++.....   .        ....+.+      ....+++++|+|++++.++..+.   .
T Consensus       154 ~~~~l~~~gi~~~~vrPg~i~~~~~~~~---~--------~~~~~~~------~~~~~i~~~DvA~~i~~ll~~~~---~  213 (236)
T 3qvo_A          154 AADAIEASGLEYTILRPAWLTDEDIIDY---E--------LTSRNEP------FKGTIVSRKSVAALITDIIDKPE---K  213 (236)
T ss_dssp             HHHHHHTSCSEEEEEEECEEECCSCCCC---E--------EECTTSC------CSCSEEEHHHHHHHHHHHHHSTT---T
T ss_pred             HHHHHHHCCCCEEEEeCCcccCCCCcce---E--------EeccCCC------CCCcEECHHHHHHHHHHHHcCcc---c
Confidence            5677778889999999999998753210   0        0001111      12357999999999999998853   1


Q ss_pred             ccCceeEecCCCC
Q 020880          238 QMQLLLNVGGPDR  250 (320)
Q Consensus       238 ~~~~~~n~~~~~~  250 (320)
                      ..++.|+++++..
T Consensus       214 ~~g~~~~i~~~~~  226 (236)
T 3qvo_A          214 HIGENIGINQPGT  226 (236)
T ss_dssp             TTTEEEEEECSSC
T ss_pred             ccCeeEEecCCCC
Confidence            3466999998754

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.94  E-value=6.8e-26  Score=188.50  Aligned_cols=220  Identities=18%  Similarity=0.145  Sum_probs=159.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|+||||||+|+||++++++|+++|   ++|+++.|+.++...+.+... ..+++.+|++|++++.++++.++++|+|||
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   82 (244)
T 3d3w_A            7 GRRVLVTGAGKGIGRGTVQALHATG---ARVVAVSRTQADLDSLVRECP-GIEPVCVDLGDWEATERALGSVGPVDLLVN   82 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHTTCCCCCEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHcC-CCCEEEEeCCCHHHHHHHHHHcCCCCEEEE
Confidence            4799999999999999999999999   899999998765555444432 466789999999999999886667999999


Q ss_pred             CCCccCccc----cccCchhhhhccccccHHHHHhhhhh----cc-CceEEEeechhhhcccCCCCcccCCCCCcchHHH
Q 020880           83 CAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTE----NK-ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGK  153 (320)
Q Consensus        83 ~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~----~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~  153 (320)
                      +||......    ...+++..+++|+.+++ ++++++..    .+ ..+||++||...+.+.          .+...|+.
T Consensus        83 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~-~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y~~  151 (244)
T 3d3w_A           83 NAAVALLQPFLEVTKEAFDRSFEVNLRAVI-QVSQIVARGLIARGVPGAIVNVSSQCSQRAV----------TNHSVYCS  151 (244)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----------TTBHHHHH
T ss_pred             CCccCCCcchhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhCCCCcEEEEeCchhhccCC----------CCCchHHH
Confidence            999764321    22345678999999985 77776654    34 5699999999877532          34678999


Q ss_pred             HHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHH
Q 020880          154 SKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL  226 (320)
Q Consensus       154 sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  226 (320)
                      +|...|.+++.+       +.++.++||+.++++..........   ...... ...+       ...+++++|+|++++
T Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~-~~~~-------~~~~~~~~dva~~~~  220 (244)
T 3d3w_A          152 TKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH---KAKTML-NRIP-------LGKFAEVEHVVNAIL  220 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTT---HHHHHH-HTCT-------TCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChH---HHHHHH-hhCC-------CCCCcCHHHHHHHHH
Confidence            999999988764       3467889999999875321101111   111111 1111       246899999999999


Q ss_pred             HHHhhhhccccccCceeEecCCCC
Q 020880          227 ALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       227 ~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      .++.....  ...+.+|++++|..
T Consensus       221 ~l~~~~~~--~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          221 FLLSDRSG--MTTGSTLPVEGGFW  242 (244)
T ss_dssp             HHHSGGGT--TCCSCEEEESTTGG
T ss_pred             HHcCcccc--CCCCCEEEECCCcc
Confidence            99976421  12355899988753

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.94  E-value=5.7e-27  Score=201.20  Aligned_cols=238  Identities=13%  Similarity=0.113  Sum_probs=168.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----CCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      ++|+||||||+|+||++++++|+++|   ++|++++|+.+......+.+    +.++.++.+|++|++++.++++.    
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLG---AQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999   89999999876554433322    45688899999999988877654    


Q ss_pred             hCCCCEEEECCCccCc----cccccCchhhhhccccccHHHHHhhhhh-----ccCceEEEeechhhhcccCCCCcccCC
Q 020880           74 FGQPDVVVNCAALSVP----RVCENDPDSAMSINVPSSLVNWLSSFTE-----NKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~~~l~~~~~-----~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      ++++|+|||+||....    .....+++..+++|+.+++ ++++++..     .+..++|++||.+.+.+.         
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  171 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTA-FVTLEIGKQLIKAQKGAAFLSITTIYAETGS---------  171 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHTTCCEEEEEECCTHHHHCC---------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHhcCCCEEEEEcccccccCC---------
Confidence            3578999999997543    2223445778899999986 77666642     344699999999876532         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       .+...|+.+|...|.+++.+       +.++.++||+.++++...........  .... +....+.       ..+++
T Consensus       172 -~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~-~~~~~p~-------~~~~~  240 (302)
T 1w6u_A          172 -GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT--FEKE-MIGRIPC-------GRLGT  240 (302)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSH--HHHH-HHTTCTT-------SSCBC
T ss_pred             -CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchh--hHHH-HHhcCCc-------CCCCC
Confidence             34678999999999988764       34578999999998742211111111  1111 1122221       24789


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRG  265 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~  265 (320)
                      ++|+|++++.++.....  ...+.+|++.+|..+++.++++.+.+..+
T Consensus       241 ~~dva~~~~~l~~~~~~--~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          241 VEELANLAAFLCSDYAS--WINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             HHHHHHHHHHHTSGGGT--TCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             HHHHHHHHHHHcCCccc--ccCCCEEEECCCeeeccCCccccchhhcc
Confidence            99999999999875422  12355999999988888888777765544

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=2.7e-26  Score=194.59  Aligned_cols=239  Identities=14%  Similarity=0.161  Sum_probs=156.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC------CCcceEEEeeCCCcccHHHHHH---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL------PHSFVFFDVDLKSGSGFDAVAL---   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~---   72 (320)
                      ++|++|||||+|+||++++++|+++|   ++|+++.|+.++.....+.+      +.++.++.+|++|++++.++++   
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREG---AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   81 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence            46799999999999999999999999   89999999866554433222      2357789999999998877665   


Q ss_pred             -HhCCCCEEEECCCccCcc----c----cccCchhhhhccccccHHHHHhhhhhc----cCceEEEeechhh-hcccCCC
Q 020880           73 -KFGQPDVVVNCAALSVPR----V----CENDPDSAMSINVPSSLVNWLSSFTEN----KENLLIHLSTDQV-YEGVKSF  138 (320)
Q Consensus        73 -~~~~~d~Vih~a~~~~~~----~----~~~~~~~~~~~n~~~~~~~~l~~~~~~----~~~~~v~~Ss~~v-y~~~~~~  138 (320)
                       .++++|+|||+||.....    .    +..+++..+++|+.+++ ++++++...    + .++|++||... +.+.   
T Consensus        82 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~---  156 (278)
T 1spx_A           82 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI-ALTKKAVPHLSSTK-GEIVNISSIASGLHAT---  156 (278)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHT-CEEEEECCTTSSSSCC---
T ss_pred             HHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHhhcC-CeEEEEecccccccCC---
Confidence             346899999999975432    1    33445678999999986 777776542    5 69999999887 5432   


Q ss_pred             CcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCC-C-CCC--hHHHHHHHHhcCCceEe
Q 020880          139 YKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPV-P-KSL--PIQWIDSVLSKGEKVEF  207 (320)
Q Consensus       139 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~-~-~~~--~~~~~~~~~~~~~~~~~  207 (320)
                             .+...|+.+|...+.+.+.+       +.++.++||+.+.++...... . ...  ......... ...+   
T Consensus       157 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~p---  225 (278)
T 1spx_A          157 -------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMK-ECVP---  225 (278)
T ss_dssp             -------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHH-HHCT---
T ss_pred             -------CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHH-hcCC---
Confidence                   23568999999999987763       457889999999987532110 0 000  000011111 1111   


Q ss_pred             ecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHh
Q 020880          208 FHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIR  264 (320)
Q Consensus       208 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~  264 (320)
                          ...+++++|+|++++.++..+... ...+.+|++.+|...++.|+++.+.+.+
T Consensus       226 ----~~~~~~~~dvA~~v~~l~s~~~~~-~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          226 ----AGVMGQPQDIAEVIAFLADRKTSS-YIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             ----TSSCBCHHHHHHHHHHHHCHHHHT-TCCSCEEEESTTGGGC------------
T ss_pred             ----CcCCCCHHHHHHHHHHHcCccccC-cccCcEEEECCCcccccCcccccHHHHh
Confidence                124789999999999998764321 0124599999999999999999987753

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.93  E-value=1.1e-25  Score=188.68  Aligned_cols=228  Identities=17%  Similarity=0.152  Sum_probs=163.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~d   78 (320)
                      +|++|||||+|+||++++++|+++|   ++|++.+|+.+........++..+.++.+|++|++++.++++    .++++|
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            8 GKSALITGSARGIGRAFAEAYVREG---ATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999   899999998777666666656678889999999998777665    446899


Q ss_pred             EEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhhc----c-CceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           79 VVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTEN----K-ENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        79 ~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~~----~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      +|||+||......    +.++++..+++|+.+++ ++++++...    + ..+||++||...+.+.          .+..
T Consensus        85 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  153 (259)
T 4e6p_A           85 ILVNNAALFDLAPIVEITRESYEKLFAINVAGTL-FTLQAAARQMIAQGRGGKIINMASQAGRRGE----------ALVA  153 (259)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------TTBH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCeEEEEECChhhccCC----------CCCh
Confidence            9999999865422    23445677889999986 777776532    2 3489999999876432          2367


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHh--cCCceEeec--CcccCceeH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLS--KGEKVEFFH--DECRCPVYV  218 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~i~v  218 (320)
                      .|+.+|...+.+.+.+       +.++.+++|+.|+++....      ....+.....  .+......+  ...+.+.++
T Consensus       154 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~  227 (259)
T 4e6p_A          154 IYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG------VDALFARYENRPRGEKKRLVGEAVPFGRMGTA  227 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH------HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh------hhhhhhhhccCChHHHHHHHhccCCCCCCcCH
Confidence            8999999999988764       3456789999999875310      0001111100  011111111  134568999


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      +|+|++++.++.....  ...+.+|++.+|..+|
T Consensus       228 ~dva~~v~~L~s~~~~--~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          228 EDLTGMAIFLASAESD--YIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HHHHHHHHHTTSGGGT--TCCSCEEEESTTSSCC
T ss_pred             HHHHHHHHHHhCCccC--CCCCCEEEECcChhcC
Confidence            9999999998865432  1235599999987654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.93  E-value=2.8e-26  Score=185.99  Aligned_cols=189  Identities=15%  Similarity=0.124  Sum_probs=147.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|+||||+|+||++++++|+++     +|++++|++++...+.+..+.  .++.+|++|++++.++++.++++|+|||+
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~-----~V~~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~id~vi~~   73 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH-----DLLLSGRRAGALAELAREVGA--RALPADLADELEAKALLEEAGPLDLLVHA   73 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS-----EEEEECSCHHHHHHHHHHHTC--EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC-----CEEEEECCHHHHHHHHHhccC--cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence            57999999999999999999987     588889986655554443332  77889999999999888766689999999


Q ss_pred             CCccCcc----ccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHH
Q 020880           84 AALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAE  159 (320)
Q Consensus        84 a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e  159 (320)
                      ||.....    .+..+++..+++|+.+++ ++++++.+.+.++||++||..+|.+.          .+...|+.+|...|
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y~~sK~a~~  142 (207)
T 2yut_A           74 VGKAGRASVREAGRDLVEEMLAAHLLTAA-FVLKHARFQKGARAVFFGAYPRYVQV----------PGFAAYAAAKGALE  142 (207)
T ss_dssp             CCCCCCBCSCC---CHHHHHHHHHHHHHH-HHHHHCCEEEEEEEEEECCCHHHHSS----------TTBHHHHHHHHHHH
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHhcCCcEEEEEcChhhccCC----------CCcchHHHHHHHHH
Confidence            9976432    233456788999999996 99999977777899999999988532          35779999999999


Q ss_pred             HHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhh
Q 020880          160 KFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       160 ~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  232 (320)
                      .+++.+       +.++.++||+.++++...                ..+       ...+.+++++|+|++++.++.++
T Consensus       143 ~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~----------------~~~-------~~~~~~~~~~dva~~~~~~~~~~  199 (207)
T 2yut_A          143 AYLEAARKELLREGVHLVLVRLPAVATGLWA----------------PLG-------GPPKGALSPEEAARKVLEGLFRE  199 (207)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECCCCBCSGGGG----------------GGT-------SCCTTCBCHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHhhhCCEEEEEecCcccCCCcc----------------ccC-------CCCCCCCCHHHHHHHHHHHHhCC
Confidence            988764       567899999999886410                011       12357899999999999999875


Q ss_pred             h
Q 020880          233 L  233 (320)
Q Consensus       233 ~  233 (320)
                      .
T Consensus       200 ~  200 (207)
T 2yut_A          200 P  200 (207)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.93  E-value=1.7e-25  Score=180.70  Aligned_cols=186  Identities=12%  Similarity=0.096  Sum_probs=144.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|+||||||+|+||++++++|+ +|   ++|+++.|+.+              ++.+|++|++++.++++.++++|+|||
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g---~~V~~~~r~~~--------------~~~~D~~~~~~~~~~~~~~~~~d~vi~   64 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KK---AEVITAGRHSG--------------DVTVDITNIDSIKKMYEQVGKVDAIVS   64 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TT---SEEEEEESSSS--------------SEECCTTCHHHHHHHHHHHCCEEEEEE
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CC---CeEEEEecCcc--------------ceeeecCCHHHHHHHHHHhCCCCEEEE
Confidence            4689999999999999999999 99   89999999853              278999999999999987767999999


Q ss_pred             CCCccCccc----cccCchhhhhccccccHHHHHhhhhhc---cCceEEEeechhhhcccCCCCcccCCCCCcchHHHHH
Q 020880           83 CAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTEN---KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSK  155 (320)
Q Consensus        83 ~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~~---~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK  155 (320)
                      +||......    +..++...+++|+.+++ ++++++.+.   + .++|++||...+.+.          .+...|+.+|
T Consensus        65 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~-~~iv~~sS~~~~~~~----------~~~~~Y~~sK  132 (202)
T 3d7l_A           65 ATGSATFSPLTELTPEKNAVTISSKLGGQI-NLVLLGIDSLNDK-GSFTLTTGIMMEDPI----------VQGASAAMAN  132 (202)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHTTTHHHH-HHHHTTGGGEEEE-EEEEEECCGGGTSCC----------TTCHHHHHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHhhccHHHH-HHHHHHHHHhccC-CEEEEEcchhhcCCC----------CccHHHHHHH
Confidence            999754321    12234567789999996 999988775   4 599999998776432          3467899999


Q ss_pred             HHHHHHHHHHc------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHH
Q 020880          156 VAAEKFIYEKC------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT  229 (320)
Q Consensus       156 ~~~e~~~~~~~------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  229 (320)
                      ...|.+++.+.      .++.++||+.++++...               ...       +...+++++++|+|++++.++
T Consensus       133 ~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~---------------~~~-------~~~~~~~~~~~dva~~~~~~~  190 (202)
T 3d7l_A          133 GAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK---------------LEP-------FFEGFLPVPAAKVARAFEKSV  190 (202)
T ss_dssp             HHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH---------------HGG-------GSTTCCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCccCCchhh---------------hhh-------hccccCCCCHHHHHHHHHHhh
Confidence            99999988764      45688999999987420               001       112457899999999999888


Q ss_pred             hhhhccccccCceeEe
Q 020880          230 NRWLSEDKQMQLLLNV  245 (320)
Q Consensus       230 ~~~~~~~~~~~~~~n~  245 (320)
                      ....     .+++||+
T Consensus       191 ~~~~-----~G~~~~v  201 (202)
T 3d7l_A          191 FGAQ-----TGESYQV  201 (202)
T ss_dssp             HSCC-----CSCEEEE
T ss_pred             hccc-----cCceEec
Confidence            4322     2347876

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.93  E-value=3.5e-26  Score=194.12  Aligned_cols=239  Identities=15%  Similarity=0.147  Sum_probs=171.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CC---cceEEEeeCCCcccHHHHHHH---
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PH---SFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      +|++|||||+|+||++++++|+++|   ++|++.+|+++......+.+   +.   .+.++.+|++|++++.++++.   
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (281)
T 3svt_A           11 DRTYLVTGGGSGIGKGVAAGLVAAG---ASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA   87 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999   89999999876654443322   22   678899999999988777654   


Q ss_pred             -hCCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCcccC
Q 020880           74 -FGQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                       ++++|++||+||....     ..+.++++..+++|+.+++ ++++++..    .+..+||++||...+...        
T Consensus        88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  158 (281)
T 3svt_A           88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTM-YVLKHAAREMVRGGGGSFVGISSIAASNTH--------  158 (281)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHTTCEEEEEECCHHHHSCC--------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCcEEEEEeCHHHcCCC--------
Confidence             4689999999997322     1223345678899999996 77776654    333499999999887543        


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                        .+...|+.||...+.+.+.+.       .++.+++|+.|.++.......   ....... .....+       ...+.
T Consensus       159 --~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---~~~~~~~-~~~~~p-------~~r~~  225 (281)
T 3svt_A          159 --RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITE---SAELSSD-YAMCTP-------LPRQG  225 (281)
T ss_dssp             --TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT---CHHHHHH-HHHHCS-------SSSCB
T ss_pred             --CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhccc---CHHHHHH-HHhcCC-------CCCCC
Confidence              236789999999999887642       456789999998764310000   0011111 111112       23468


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC-HHHHHHHHHHHhCCCC
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS-RVQMAEVVAEIRGYST  268 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s-~~e~~~~i~~~~~~~~  268 (320)
                      +++|+|++++.++.....  ...+.+|++.+|...+ ..++++.+.+.++.+.
T Consensus       226 ~~~dva~~~~~l~s~~~~--~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          226 EVEDVANMAMFLLSDAAS--FVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             CHHHHHHHHHHHHSGGGT--TCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred             CHHHHHHHHHHHhCcccC--CCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence            899999999999876432  1235599999988776 7789999988888653

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.93  E-value=1.8e-24  Score=182.54  Aligned_cols=220  Identities=14%  Similarity=0.131  Sum_probs=164.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++.+|+.+......+.++..+.++.+|++|++++.++++    .++++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAG---ARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRL   86 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999   899999999888777766666678889999999998877765    34689


Q ss_pred             CEEEECCCccCc------cccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           78 DVVVNCAALSVP------RVCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        78 d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      |++||+||...+      ..+.++++..+++|+.+++ ++++++    ++.+..+||++||...+...          .+
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~  155 (271)
T 3tzq_B           87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTM-LMCKYAIPRLISAGGGAIVNISSATAHAAY----------DM  155 (271)
T ss_dssp             CEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHTTCEEEEEECCGGGTSBC----------SS
T ss_pred             CEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCEEEEECCHHHcCCC----------CC
Confidence            999999998633      1223445678999999996 787777    55666799999999887532          24


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+.+.+       +.++.+++|+.|+++......    ...... .+....+.       ..+...+|
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----~~~~~~-~~~~~~~~-------~r~~~p~d  223 (271)
T 3tzq_B          156 STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL----PQPIVD-IFATHHLA-------GRIGEPHE  223 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-------CHHHHH-HHHTTSTT-------SSCBCHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC----CHHHHH-HHHhcCCC-------CCCcCHHH
Confidence            678999999999987764       346678999999988642111    112222 22222222       23678999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|++++.++.....  ...+.++++.+|.
T Consensus       224 vA~~v~~L~s~~~~--~itG~~i~vdGG~  250 (271)
T 3tzq_B          224 IAELVCFLASDRAA--FITGQVIAADSGL  250 (271)
T ss_dssp             HHHHHHHHHSGGGT--TCCSCEEEESTTT
T ss_pred             HHHHHHHHhCcccC--CcCCCEEEECCCc
Confidence            99999999876432  1235599999883

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.93  E-value=7.4e-25  Score=183.96  Aligned_cols=222  Identities=14%  Similarity=0.146  Sum_probs=158.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      +|+||||||+|+||++++++|+++|   ++|++++|+.+......+.   .+.++.++.+|++|++++.++++.    ++
T Consensus        13 ~k~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           13 NRVAIVTGGAQNIGLACVTALAEAG---ARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG   89 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999   8999999986554433322   245688899999999988877753    35


Q ss_pred             CCCEEEECCCccC-cc----ccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSV-PR----VCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~-~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|+|||+||... ..    ....+++..+++|+.+++ ++++++..    .+..++|++||.+.+...        +..
T Consensus        90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------~~~  160 (260)
T 3awd_A           90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMF-RSCQAVGRIMLEQKQGVIVAIGSMSGLIVN--------RPQ  160 (260)
T ss_dssp             CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------SSS
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHH-HHHHHHHHHHhhcCCCEEEEEecchhcccC--------CCC
Confidence            8999999999764 21    122334677899999986 77777653    456699999998776432        122


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      |...|+.+|...|.+++.+       +.++.++||+.++++.......   ...+..... .+.+       ...+++++
T Consensus       161 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~-~~~~-------~~~~~~~~  229 (260)
T 3awd_A          161 QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGME---KPELYDAWI-AGTP-------MGRVGQPD  229 (260)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHT---CHHHHHHHH-HTCT-------TSSCBCHH
T ss_pred             CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccC---ChHHHHHHH-hcCC-------cCCCCCHH
Confidence            3478999999999988764       4467899999999986420000   011222222 2222       23478999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+|++++.++.....  ...+.+|++++|.
T Consensus       230 dva~~~~~l~~~~~~--~~~G~~~~v~gg~  257 (260)
T 3awd_A          230 EVASVVQFLASDAAS--LMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHHHHHHHHSGGGT--TCCSCEEEESTTT
T ss_pred             HHHHHHHHHhCchhc--cCCCcEEEECCce
Confidence            999999999876322  1235589998874

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.93  E-value=3.7e-25  Score=186.23  Aligned_cols=225  Identities=17%  Similarity=0.160  Sum_probs=155.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC----------CcceEEEeeCCCcccHHHHH
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP----------HSFVFFDVDLKSGSGFDAVA   71 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dl~d~~~~~~~~   71 (320)
                      ++|+||||||+|+||++++++|+++|   ++|+++.|+.+....+.+.+.          .++.++.+|++|++++.+++
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEG---ATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            46799999999999999999999999   899999998765554443321          45788999999999887777


Q ss_pred             HH----hCCC-CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc----c-CceEEEeechhhhcccCC
Q 020880           72 LK----FGQP-DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN----K-ENLLIHLSTDQVYEGVKS  137 (320)
Q Consensus        72 ~~----~~~~-d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~----~-~~~~v~~Ss~~vy~~~~~  137 (320)
                      +.    ++++ |+|||+||.....    .+..+++..+++|+.+++ ++++++.+.    + ..+||++||...+.+.  
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  159 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTF-LVTQAAAQALVSNGCRGSIINISSIVGKVGN--  159 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEEECCTHHHHCC--
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHH-HHHHHHHHHHHhcCCCceEEEECChhhccCC--
Confidence            54    3456 9999999976432    123456778999999996 888776543    3 4599999998765332  


Q ss_pred             CCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC
Q 020880          138 FYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD  210 (320)
Q Consensus       138 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (320)
                              .+...|+.+|...|.+.+.+       +.++.++||+.++++.....     ...+.. .+..+.+      
T Consensus       160 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~~~~~~-~~~~~~~------  219 (264)
T 2pd6_A          160 --------VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV-----PQKVVD-KITEMIP------  219 (264)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------------CTGGGCT------
T ss_pred             --------CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc-----CHHHHH-HHHHhCC------
Confidence                    24678999999999877654       45678999999999864211     101111 1111111      


Q ss_pred             cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHH
Q 020880          211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ  255 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e  255 (320)
                       ...+++++|+|++++.++.....  ...+..+++.+|...+...
T Consensus       220 -~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gg~~~~~~~  261 (264)
T 2pd6_A          220 -MGHLGDPEDVADVVAFLASEDSG--YITGTSVEVTGGLFMAENL  261 (264)
T ss_dssp             -TCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTC------
T ss_pred             -CCCCCCHHHHHHHHHHHcCCccc--CCCCCEEEECCCceecccc
Confidence             23478999999999999875421  2235689999887655443

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.93  E-value=1.5e-25  Score=188.82  Aligned_cols=221  Identities=13%  Similarity=0.052  Sum_probs=145.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHHh----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      .+|+||||||+|+||++++++|+++|   ++|+++.|+++........   .+..+.++.+|++|++++.++++.+    
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFG---AVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999999   8999999986554443322   2346788999999999888777543    


Q ss_pred             -CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 -GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                       +++|+|||+||.....    .+..+++..+++|+.+++ ++++++    ++.+.++||++||...+.+.          
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  158 (266)
T 1xq1_A           90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAY-HLSQLAHPLLKASGCGNIIFMSSIAGVVSA----------  158 (266)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHSSCEEEEEC------------------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCcEEEEEccchhccCC----------
Confidence             6899999999975432    123345677899999996 887777    45667799999999876532          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...|.+.+.+       +.++.++||+.++++.......    ..+... +....+       ...++++
T Consensus       159 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~~~~-~~~~~~-------~~~~~~~  226 (266)
T 1xq1_A          159 SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD----DEFKKV-VISRKP-------LGRFGEP  226 (266)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------------------CCG
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcC----HHHHHH-HHhcCC-------CCCCcCH
Confidence            23568999999999987754       4678899999999986421110    011111 111111       1247899


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +|+|++++.++.....  ...+.++++.+|..
T Consensus       227 ~dva~~~~~l~~~~~~--~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          227 EEVSSLVAFLCMPAAS--YITGQTICVDGGLT  256 (266)
T ss_dssp             GGGHHHHHHHTSGGGT--TCCSCEEECCCCEE
T ss_pred             HHHHHHHHHHcCcccc--CccCcEEEEcCCcc
Confidence            9999999999865321  12355899988754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.93  E-value=7.2e-25  Score=187.00  Aligned_cols=226  Identities=13%  Similarity=0.052  Sum_probs=166.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+++||||+|+||++++++|+++|   ++|++.+|+.++.....+.++.++.++.+|++|.++++++++.++++|+||
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv   91 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRG---ATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLI   91 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            46899999999999999999999999   899999999877777766666788999999999999999998777889999


Q ss_pred             ECCCccCcc--ccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC---CCcccCCCCCcchHHHHHH
Q 020880           82 NCAALSVPR--VCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS---FYKEEDEIAPVNVYGKSKV  156 (320)
Q Consensus        82 h~a~~~~~~--~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~---~~~E~~~~~p~~~Y~~sK~  156 (320)
                      |+||...+.  .+..+++..+++|+.+++ ++++++.....++||++||...+.....   ...+..+..+...|+.||.
T Consensus        92 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  170 (291)
T 3rd5_A           92 NNAGIMAVPYALTVDGFESQIGTNHLGHF-ALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKL  170 (291)
T ss_dssp             ECCCCCSCCCCBCTTSCBHHHHHHTHHHH-HHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHH
T ss_pred             ECCcCCCCcccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHH
Confidence            999986542  344567889999999997 9999998887779999999988754322   2233345566789999999


Q ss_pred             HHHHHHHHH-------c--CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHH
Q 020880          157 AAEKFIYEK-------C--SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA  227 (320)
Q Consensus       157 ~~e~~~~~~-------~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  227 (320)
                      ..+.+.+.+       +  .++..++||.|..+-....     ...+. ..+. ..+.      .+-....+|+|++++.
T Consensus       171 a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~-----~~~~~-~~~~-~~~~------~~~~~~~~~~A~~~~~  237 (291)
T 3rd5_A          171 ANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS-----GRKLG-DALM-SAAT------RVVATDADFGARQTLY  237 (291)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------------------CHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc-----chHHH-HHHH-HHHH------HHHhCCHHHHHHHHHH
Confidence            999877654       2  4567799999976543211     00010 1010 0011      1123459999999999


Q ss_pred             HHhhhhccccccCceeEecCC
Q 020880          228 LTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       228 ~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ++..+..    .+..+++.+|
T Consensus       238 l~~~~~~----~G~~~~vdgG  254 (291)
T 3rd5_A          238 AASQDLP----GDSFVGPRFG  254 (291)
T ss_dssp             HHHSCCC----TTCEEEETTS
T ss_pred             HHcCCCC----CCceeCCccc
Confidence            9987433    3447777654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.93  E-value=3.6e-25  Score=184.75  Aligned_cols=220  Identities=15%  Similarity=0.091  Sum_probs=157.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----CCcceEEEeeCCCcccHHHHHHH----h
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      +|+++||||+|+||++++++|+++|   ++|++++|+.+.........    +..+.++.+|++|++++.++++.    +
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARG---DRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF   78 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999   89999999866554433222    34678899999999988777653    4


Q ss_pred             CCCCEEEECCCccCccc-------cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccC
Q 020880           75 GQPDVVVNCAALSVPRV-------CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~-------~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                      +++|+|||+||......       ...+++..+++|+.+++ ++++++    ++.+.+++|++||...+.+.        
T Consensus        79 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------  149 (250)
T 2cfc_A           79 GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIF-LGCRAVLPHMLLQGAGVIVNIASVASLVAF--------  149 (250)
T ss_dssp             SCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------
T ss_pred             CCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhCCCCEEEEECChhhccCC--------
Confidence            58999999999764321       22345678899999985 554444    44566799999999877532        


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                        .+...|+.+|...|.+.+.+       +.++.++||+.++++.......   ...+..... ...+       ...+.
T Consensus       150 --~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~-~~~~-------~~~~~  216 (250)
T 2cfc_A          150 --PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLD---QPELRDQVL-ARIP-------QKEIG  216 (250)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHT---SHHHHHHHH-TTCT-------TCSCB
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccC---CHHHHHHHH-hcCC-------CCCCc
Confidence              24678999999999987764       4567899999999986421000   011222221 2222       23478


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +.+|+|++++.++..+..  ...+.++++.+|.
T Consensus       217 ~~~dva~~~~~l~~~~~~--~~~G~~~~v~gG~  247 (250)
T 2cfc_A          217 TAAQVADAVMFLAGEDAT--YVNGAALVMDGAY  247 (250)
T ss_dssp             CHHHHHHHHHHHHSTTCT--TCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHcCchhh--cccCCEEEECCce
Confidence            999999999999876421  1235589998764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.93  E-value=1.8e-25  Score=187.92  Aligned_cols=227  Identities=15%  Similarity=0.141  Sum_probs=159.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----CCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      +|++|||||+|+||++++++|+++|   ++|+++.|++++.....+.+    +.++.++.+|++|++++.++++    .+
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            7 GKVAVITGSSSGIGLAIAEGFAKEG---AHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF   83 (263)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999   89999999866554433322    3467889999999998877765    34


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|+|||+||.....    ....+++..+++|+.+++ ++++++.    +.+..+||++||.+.+.+.          .
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  152 (263)
T 3ai3_A           84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAV-RLARGLVPGMRARGGGAIIHNASICAVQPL----------W  152 (263)
T ss_dssp             SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------T
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCcEEEEECchhhcCCC----------C
Confidence            6899999999976432    123345678899999986 6666653    4556799999999987642          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCC------CCChHHHHHHHHhcCCceEeecCccc
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVP------KSLPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                      +...|+.+|...+.+.+.+       +.++.++||+.++++.......      ............ ..      .....
T Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~p~~  225 (263)
T 3ai3_A          153 YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVA-DE------HAPIK  225 (263)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHH-HH------HCTTC
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHH-hc------CCCCC
Confidence            3668999999999977764       3467889999999874210000      000001111111 11      01123


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      .+++++|+|++++.++..+..  ...+.+|++.+|...|
T Consensus       226 ~~~~~~dvA~~~~~l~s~~~~--~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          226 RFASPEELANFFVFLCSERAT--YSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             SCBCHHHHHHHHHHHTSTTCT--TCCSCEEEESTTCCCC
T ss_pred             CCcCHHHHHHHHHHHcCcccc--CCCCcEEEECCCcccc
Confidence            589999999999999875321  1235599999887654

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.93  E-value=1.4e-24  Score=182.02  Aligned_cols=212  Identities=18%  Similarity=0.210  Sum_probs=156.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      ++|+||||||+|+||++++++|+++|   ++|++..|+.+....      ..+.++.+|++|++++.++++    .++++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   97 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRN---YRVVATSRSIKPSAD------PDIHTVAGDISKPETADRIVREGIERFGRI   97 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSCCCCSS------TTEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChhhccc------CceEEEEccCCCHHHHHHHHHHHHHHCCCC
Confidence            36799999999999999999999999   899999998665322      357789999999998877665    44689


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||.....    .+.++++..+++|+.+++ ++++++    ++.+..++|++||...+...        +..+..
T Consensus        98 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--------~~~~~~  168 (260)
T 3un1_A           98 DSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFF-HITQRAAAEMLKQGSGHIVSITTSLVDQPM--------VGMPSA  168 (260)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCEEEEEECCTTTTSCB--------TTCCCH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCcEEEEEechhhccCC--------CCCccH
Confidence            9999999986432    223445678889999996 777776    45666799999998876432        223567


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.||...+.+.+.+       +.++.+++|+.|.++...    .. .   . .......+       ...+.+++|+|
T Consensus       169 ~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~----~~-~---~-~~~~~~~p-------~~r~~~~~dva  232 (260)
T 3un1_A          169 LASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHP----AE-T---H-STLAGLHP-------VGRMGEIRDVV  232 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSC----GG-G---H-HHHHTTST-------TSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCC----HH-H---H-HHHhccCC-------CCCCcCHHHHH
Confidence            8999999999987764       345678999999987542    11 1   1 11112222       23578899999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      ++++.+.+...    ..+.+|++.+|...
T Consensus       233 ~av~~L~~~~~----itG~~i~vdGG~~~  257 (260)
T 3un1_A          233 DAVLYLEHAGF----ITGEILHVDGGQNA  257 (260)
T ss_dssp             HHHHHHHHCTT----CCSCEEEESTTGGG
T ss_pred             HHHHHhcccCC----CCCcEEEECCCeec
Confidence            99999844322    23559999988644

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.93  E-value=2.2e-24  Score=180.69  Aligned_cols=220  Identities=14%  Similarity=0.190  Sum_probs=151.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~d   78 (320)
                      +|++|||||+|+||++++++|+++|   ++|+++.|+++..+.....++..+.++.+|++|++++.++++    .++++|
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   83 (257)
T 3tpc_A            7 SRVFIVTGASSGLGAAVTRMLAQEG---ATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVH   83 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999999999999999   899999999887766666556678889999999998877765    346899


Q ss_pred             EEEECCCccCcc--------ccccCchhhhhccccccHHHHHhhhhhc----------cCceEEEeechhhhcccCCCCc
Q 020880           79 VVVNCAALSVPR--------VCENDPDSAMSINVPSSLVNWLSSFTEN----------KENLLIHLSTDQVYEGVKSFYK  140 (320)
Q Consensus        79 ~Vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~~~l~~~~~~----------~~~~~v~~Ss~~vy~~~~~~~~  140 (320)
                      ++||+||.....        .+.++++..+++|+.+++ ++++++...          +..+||++||...+.+.     
T Consensus        84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~-----  157 (257)
T 3tpc_A           84 GLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTF-NMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ-----  157 (257)
T ss_dssp             EEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHH-HHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-----
T ss_pred             EEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC-----
Confidence            999999986432        123456678899999996 777777542          34589999999877532     


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCccc
Q 020880          141 EEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       141 E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                           .+...|+.||...+.+.+.+       +.++.+++|+.|.++.....     ... ....+....++      ..
T Consensus       158 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-----~~~-~~~~~~~~~p~------~~  220 (257)
T 3tpc_A          158 -----IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGM-----PQD-VQDALAASVPF------PP  220 (257)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------------CCSSS------SC
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC-----CHH-HHHHHHhcCCC------CC
Confidence                 24678999999999877653       34677899999988753211     001 11111111111      13


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      .+.+.+|+|++++.++....    ..+.++++.+|..++
T Consensus       221 r~~~~~dva~~v~~l~s~~~----itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          221 RLGRAEEYAALVKHICENTM----LNGEVIRLDGALRMA  255 (257)
T ss_dssp             SCBCHHHHHHHHHHHHHCTT----CCSCEEEESTTCCC-
T ss_pred             CCCCHHHHHHHHHHHcccCC----cCCcEEEECCCccCC
Confidence            57899999999999987632    235599999886654

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.93  E-value=1.3e-24  Score=182.23  Aligned_cols=215  Identities=14%  Similarity=0.136  Sum_probs=157.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      ++|++|||||+|+||++++++|+++|   ++|++..|+.++.....+.+...+.++.+|++|++++.++++    .++++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEG---AKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            35799999999999999999999999   899999998766555544444457789999999998877765    34689


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHH----hhhhhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWL----SSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l----~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||.....    .+..+++..+++|+.+++ ++.    +.+++.+..+||++||...+.+.          .+..
T Consensus        83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  151 (260)
T 1nff_A           83 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVF-LGIRAVVKPMKEAGRGSIINISSIEGLAGT----------VACH  151 (260)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TTBH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCEEEEEeehhhcCCC----------CCch
Confidence            9999999976432    223345678899999985 444    44455566799999999887532          2356


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...+.+.+.+       +.++.++||+.++++... . ..             . .+.  ......+++++|+|
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~~-------------~-~~~--~~~~~~~~~~~dvA  213 (260)
T 1nff_A          152 GYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W-VP-------------E-DIF--QTALGRAAEPVEVS  213 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-SC-------------T-TCS--CCSSSSCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-ch-------------h-hHH--hCccCCCCCHHHHH
Confidence            8999999999987753       346789999999987532 0 00             0 000  01123578999999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ++++.++.....  ...+.+|++.+|..
T Consensus       214 ~~v~~l~s~~~~--~~~G~~~~v~gG~~  239 (260)
T 1nff_A          214 NLVVYLASDESS--YSTGAEFVVDGGTV  239 (260)
T ss_dssp             HHHHHHHSGGGT--TCCSCEEEESTTGG
T ss_pred             HHHHHHhCcccc--CCcCCEEEECCCee
Confidence            999999875422  12355899988754

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.93  E-value=5.8e-25  Score=184.57  Aligned_cols=224  Identities=15%  Similarity=0.060  Sum_probs=158.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      .+|++|||||+|+||++++++|+++|   ++|+++.|+.++.....+.   .+..+.++.+|++|++++.++++    .+
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDG---AHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999   8999999986554433322   23467788999999998777665    34


Q ss_pred             CCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +++|+|||+||....     ..+.++++..+++|+.+++ ++++++.    +.+..+||++||...|.+.          
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  158 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATV-LMTKAVVPEMEKRGGGSVLIVSSVGAYHPF----------  158 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCEEEEEECCGGGTSCC----------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCCEEEEEechhhcCCC----------
Confidence            689999999997531     1223345678899999986 7766653    4566799999999887532          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+.+.+       +.++.+++|+.+..+........   .... ..+...       ...+.++++
T Consensus       159 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~-~~~~~~-------~~~~~~~~~  227 (260)
T 2zat_A          159 PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMD---KARK-EYMKES-------LRIRRLGNP  227 (260)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSS---HHHH-HHHHHH-------HTCSSCBCG
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccC---hHHH-HHHHhc-------CCCCCCCCH
Confidence            24678999999999988765       34678899999987642100000   0000 001000       012357899


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      +|+|++++.++.....  ...+.++++++|..+|
T Consensus       228 ~dva~~v~~l~s~~~~--~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          228 EDCAGIVSFLCSEDAS--YITGETVVVGGGTASR  259 (260)
T ss_dssp             GGGHHHHHHHTSGGGT--TCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHcCcccC--CccCCEEEECCCcccc
Confidence            9999999999876432  1135599999987765

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.92  E-value=8.9e-25  Score=182.15  Aligned_cols=219  Identities=15%  Similarity=0.103  Sum_probs=155.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh----CCCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA----LPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      ++|+|+||||+|+||++++++|+++|   ++|+++.|+.++...+.+.    .+..+.++.+|++|++++.++++.    
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAG---STVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            35799999999999999999999999   8999999986554443322    234678899999999998877753    


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++++|+|||+||.....    .+..+++..+++|+.+++ ++++++    ++.+.++||++||...+.+.          
T Consensus        83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------  151 (248)
T 2pnf_A           83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTF-LVTQNSLRKMIKQRWGRIVNISSVVGFTGN----------  151 (248)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHCHHHHHHTCEEEEEECCHHHHHCC----------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHhcCCcEEEEEccHHhcCCC----------
Confidence            35899999999976432    123345678999999985 555544    44566799999998765322          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+.+.+       +.++.++||+.++++....     +...+. .......+       ...++++
T Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~-----~~~~~~-~~~~~~~~-------~~~~~~~  218 (248)
T 2pnf_A          152 VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV-----LSEEIK-QKYKEQIP-------LGRFGSP  218 (248)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-----SCHHHH-HHHHHTCT-------TSSCBCH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh-----ccHHHH-HHHHhcCC-------CCCccCH
Confidence            23568999999999877754       3467889999999875421     111111 11211211       2357899


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|+|++++.++.....  ...+.+|++++|.
T Consensus       219 ~dva~~~~~l~~~~~~--~~~G~~~~v~gg~  247 (248)
T 2pnf_A          219 EEVANVVLFLCSELAS--YITGEVIHVNGGM  247 (248)
T ss_dssp             HHHHHHHHHHHSGGGT--TCCSCEEEESTTC
T ss_pred             HHHHHHHHHHhCchhh--cCCCcEEEeCCCc
Confidence            9999999999876321  1235589998763

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.92  E-value=2.8e-25  Score=188.01  Aligned_cols=223  Identities=17%  Similarity=0.115  Sum_probs=156.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC-CCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r-~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      ++|+||||||+|+||++++++|+++|   ++|+++.| +.+....+.+   ..+.++.++.+|++|++++.++++    .
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G---~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRG---ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999   89999998 4333333222   224567889999999998877765    3


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc---cCceEEEeechhhh-cccCCCCcccCCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN---KENLLIHLSTDQVY-EGVKSFYKEEDEI  145 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~---~~~~~v~~Ss~~vy-~~~~~~~~E~~~~  145 (320)
                      ++++|+|||+||.....    .+..+++..+++|+.+++ ++++++.+.   + ++||++||...+ .+.          
T Consensus        97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~----------  164 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQF-FVAQQGLKHCRRG-GRIILTSSIAAVMTGI----------  164 (274)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHEEEE-EEEEEECCGGGTCCSC----------
T ss_pred             cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHhhC-CEEEEEcChHhccCCC----------
Confidence            45899999999976432    223345678899999996 887777553   4 599999999887 432          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCC----CCCC---CCh-HHHHHHHHhcCCceEeecC
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTIS----PVPK---SLP-IQWIDSVLSKGEKVEFFHD  210 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~----~~~~---~~~-~~~~~~~~~~~~~~~~~~~  210 (320)
                      .+...|+.+|...|.+++.+       +.++.++||+.++++....    ..+.   ... ..... ....+.       
T Consensus       165 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------  236 (274)
T 1ja9_A          165 PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDE-GLANMN-------  236 (274)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHH-HHHHTS-------
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHH-HHHhcC-------
Confidence            23568999999999987764       4567899999998763210    0000   111 11111 111111       


Q ss_pred             cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ..+.+++++|+|++++.++..+..  ...+.+|++++|.
T Consensus       237 ~~~~~~~~~dva~~i~~l~~~~~~--~~~G~~~~v~gG~  273 (274)
T 1ja9_A          237 PLKRIGYPADIGRAVSALCQEESE--WINGQVIKLTGGG  273 (274)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTC
T ss_pred             CCCCccCHHHHHHHHHHHhCcccc--cccCcEEEecCCc
Confidence            234689999999999999876422  1135599998763

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.92  E-value=1.3e-24  Score=181.89  Aligned_cols=222  Identities=13%  Similarity=0.051  Sum_probs=156.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcc-eEEEeeCCCcccHHHHHHH---hCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSF-VFFDVDLKSGSGFDAVALK---FGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~---~~~~d   78 (320)
                      +|+++||||+|+||++++++|+++|   ++|++++|++++.+...+.++..+ .++.+|++|++++.++++.   ++++|
T Consensus        11 ~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id   87 (254)
T 2wsb_A           11 GACAAVTGAGSGIGLEICRAFAASG---ARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVS   87 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCc
Confidence            5799999999999999999999999   899999998765554444333345 7789999999998877754   36899


Q ss_pred             EEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           79 VVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        79 ~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      +|||+||......    ...+++..+++|+.+++ ++++++    ++.+.++||++||...+...        +..|.+.
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------~~~~~~~  158 (254)
T 2wsb_A           88 ILVNSAGIARLHDALETDDATWRQVMAVNVDGMF-WASRAFGRAMVARGAGAIVNLGSMSGTIVN--------RPQFASS  158 (254)
T ss_dssp             EEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------SSSCBHH
T ss_pred             EEEECCccCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCcEEEEEecchhccCC--------CCCcchH
Confidence            9999999765422    12234577889999975 555544    45566799999999877532        2234478


Q ss_pred             HHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHH
Q 020880          151 YGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK  223 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  223 (320)
                      |+.+|...|.+++.+       +.++.++||+.++++.......   ...+..... ...+       ...+++++|+|+
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~-~~~~-------~~~~~~~~dva~  227 (254)
T 2wsb_A          159 YMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRE---RPELFETWL-DMTP-------MGRCGEPSEIAA  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHT---CHHHHHHHH-HTST-------TSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcccc---ChHHHHHHH-hcCC-------CCCCCCHHHHHH
Confidence            999999999987764       3467899999999874310000   001122211 1111       235789999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCCC
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +++.++.....  ...+.++++.+|.
T Consensus       228 ~~~~l~~~~~~--~~~G~~~~v~gG~  251 (254)
T 2wsb_A          228 AALFLASPAAS--YVTGAILAVDGGY  251 (254)
T ss_dssp             HHHHHHSGGGT--TCCSCEEEESTTG
T ss_pred             HHHHHhCcccc--cccCCEEEECCCE
Confidence            99999865321  1235589998763

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.92  E-value=6.9e-25  Score=184.06  Aligned_cols=226  Identities=15%  Similarity=0.105  Sum_probs=157.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+|++|||||+|+||++++++|+++|   ++|+++.|+++......+.   .+..+.++.+|++|++++.++++.    +
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLG---ASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999999   8999999986654443332   244678899999999988777753    3


Q ss_pred             -CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 -GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                       +++|+|||+||.....    .+..+++..+++|+.+++ ++++++    ++.+..+||++||...+.+.          
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  153 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY-HLSVLAHPFLKASERGNVVFISSVSGALAV----------  153 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTSSEEEEEECCGGGTSCC----------
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCcEEEEEcchhhccCC----------
Confidence             5899999999976432    223345678899999986 777777    34556799999998876432          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...|.+.+.+       +.++.+++|+.+.++-.............+.... ...       ....++++
T Consensus       154 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~  225 (260)
T 2ae2_A          154 PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLI-DRC-------ALRRMGEP  225 (260)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHH-HTS-------TTCSCBCH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHH-hcC-------CCCCCCCH
Confidence            23668999999999988765       3456889999997653110000000000010111 111       12357899


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      +|+|++++.++.....  ...+.++++.+|...
T Consensus       226 ~dvA~~v~~l~s~~~~--~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          226 KELAAMVAFLCFPAAS--YVTGQIIYVDGGLMA  256 (260)
T ss_dssp             HHHHHHHHHHHSGGGT--TCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHcCcccc--CCCCCEEEECCCccc
Confidence            9999999998865321  123558999887543

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.92  E-value=1.9e-24  Score=180.08  Aligned_cols=218  Identities=17%  Similarity=0.158  Sum_probs=145.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEe-cCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      .+|+||||||+|+||++++++|+++|   ++|+++ .|+++......+   ..+.++.++.+|++|+++++++++.    
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G---~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMG---ANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            36899999999999999999999999   889888 566554443322   2245678899999999988777653    


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhh-hcccCCCCcccCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQV-YEGVKSFYKEEDE  144 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~v-y~~~~~~~~E~~~  144 (320)
                      ++++|+|||+||.....    .+..+++..+++|+.+++ ++++++.    +.+..+||++||... |+.          
T Consensus        81 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------  149 (247)
T 2hq1_A           81 FGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAY-LCTKAVSKIMLKQKSGKIINITSIAGIIGN----------  149 (247)
T ss_dssp             HSCCCEEEECC---------------CHHHHHHTHHHHH-HHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCcEEEEEcChhhccCC----------
Confidence            35899999999976432    234567788999999985 6666654    356679999999754 432          


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       .+...|+.+|...|.+.+.+       +.++.+++|+.+.++....     +..... .....+.+       ...+++
T Consensus       150 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----~~~~~~-~~~~~~~~-------~~~~~~  215 (247)
T 2hq1_A          150 -AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV-----LPDKVK-EMYLNNIP-------LKRFGT  215 (247)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-----SCHHHH-HHHHTTST-------TSSCBC
T ss_pred             -CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh-----cchHHH-HHHHhhCC-------CCCCCC
Confidence             23568999999999987764       3467789999887653211     111111 11222222       235789


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ++|+|++++.++..+..  ...+.+||+++|.
T Consensus       216 ~~dva~~~~~l~~~~~~--~~~G~~~~v~gG~  245 (247)
T 2hq1_A          216 PEEVANVVGFLASDDSN--YITGQVINIDGGL  245 (247)
T ss_dssp             HHHHHHHHHHHHSGGGT--TCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHcCcccc--cccCcEEEeCCCc
Confidence            99999999998876422  1234599998874

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.92  E-value=3e-24  Score=180.74  Aligned_cols=220  Identities=16%  Similarity=0.195  Sum_probs=158.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      .+|+|+||||+|+||++++++|+++|   ++|+++.|+.++.....+.++..+.++.+|++|++++.++++    .++++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQG---ASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV   87 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            46899999999999999999999999   899999999887766655555678889999999998887775    34589


Q ss_pred             CEEEECCCccCcc----------ccccCchhhhhccccccHHHHHhhhhhc----------cCceEEEeechhhhcccCC
Q 020880           78 DVVVNCAALSVPR----------VCENDPDSAMSINVPSSLVNWLSSFTEN----------KENLLIHLSTDQVYEGVKS  137 (320)
Q Consensus        78 d~Vih~a~~~~~~----------~~~~~~~~~~~~n~~~~~~~~l~~~~~~----------~~~~~v~~Ss~~vy~~~~~  137 (320)
                      |+|||+||.....          ....+++..+++|+.+++ ++++++...          +..+||++||...+.+.  
T Consensus        88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--  164 (265)
T 2o23_A           88 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF-NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ--  164 (265)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHH-HHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC--
T ss_pred             CEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC--
Confidence            9999999976432          123345678899999986 777777543          55699999999887532  


Q ss_pred             CCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC
Q 020880          138 FYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD  210 (320)
Q Consensus       138 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (320)
                              .+...|+.+|...+.+.+.+       +.++.+++|+.+.++..... ..    ... ..+....+.     
T Consensus       165 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~----~~~-~~~~~~~~~-----  225 (265)
T 2o23_A          165 --------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL-PE----KVC-NFLASQVPF-----  225 (265)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------------CHHHHTCSS-----
T ss_pred             --------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc-CH----HHH-HHHHHcCCC-----
Confidence                    24678999999999877654       34678899999987643210 00    000 001111111     


Q ss_pred             cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                       ...+++.+|+|++++.++....    ..+..+++.+|...
T Consensus       226 -~~~~~~~~dva~~~~~l~~~~~----~~G~~i~vdgG~~~  261 (265)
T 2o23_A          226 -PSRLGDPAEYAHLVQAIIENPF----LNGEVIRLDGAIRM  261 (265)
T ss_dssp             -SCSCBCHHHHHHHHHHHHHCTT----CCSCEEEESTTCCC
T ss_pred             -cCCCCCHHHHHHHHHHHhhcCc----cCceEEEECCCEec
Confidence             1247899999999999986532    23458999887544

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.92  E-value=9.6e-25  Score=183.53  Aligned_cols=224  Identities=15%  Similarity=0.126  Sum_probs=157.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~d   78 (320)
                      +|++|||||+|+||++++++|+++|   ++|++++|+.++.....+.+...+.++.+|++|++++.++++    .++++|
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD   88 (263)
T 3ak4_A           12 GRKAIVTGGSKGIGAAIARALDKAG---ATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFD   88 (263)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999999999999999   899999998766655555444467789999999998877665    346899


Q ss_pred             EEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh----cc-CceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           79 VVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE----NK-ENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        79 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      +|||+||.....    .+..+++..+++|+.+++ ++++++..    .+ ..+||++||...+.+.          .+..
T Consensus        89 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~-~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  157 (263)
T 3ak4_A           89 LLCANAGVSTMRPAVDITDEEWDFNFDVNARGVF-LANQIACRHFLASNTKGVIVNTASLAAKVGA----------PLLA  157 (263)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCCCEEEEECCGGGTSCC----------TTCH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCeEEEEecccccccCC----------CCch
Confidence            999999976432    122345678899999986 77766643    34 4699999998876432          2366


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCC-----C-CCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPV-----P-KSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                      .|+.+|...+.+.+.+       +.++.++||+.++++......     . ......... .+....       ....++
T Consensus       158 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------p~~~~~  229 (263)
T 3ak4_A          158 HYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRA-EYVSLT-------PLGRIE  229 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHH-HHHHTC-------TTCSCB
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHH-HHHhcC-------CCCCCc
Confidence            8999999999877654       457889999999876421000     0 000000111 111111       123589


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +++|+|++++.++.....  ...+.+|++.+|..
T Consensus       230 ~~~dvA~~v~~l~s~~~~--~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          230 EPEDVADVVVFLASDAAR--FMTGQGINVTGGVR  261 (263)
T ss_dssp             CHHHHHHHHHHHHSGGGT--TCCSCEEEESSSSS
T ss_pred             CHHHHHHHHHHHhCcccc--CCCCCEEEECcCEe
Confidence            999999999999876421  12355899988754

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.92  E-value=2.2e-24  Score=179.84  Aligned_cols=220  Identities=16%  Similarity=0.117  Sum_probs=157.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+||||||+|+||+++++.|+++|   ++|++.+|+.+....+.+.+...+.++.+|++|.+++.++++.++++|+||
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li   89 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLG---SKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILV   89 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            36899999999999999999999999   899999998777766666666678889999999999999998777899999


Q ss_pred             ECCCccCc----cccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcchHHH
Q 020880           82 NCAALSVP----RVCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGK  153 (320)
Q Consensus        82 h~a~~~~~----~~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~  153 (320)
                      |+||....    .....+++..+++|+.+++ ++++++.    +.+..+||++||...+.+.          .+...|+.
T Consensus        90 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~Y~~  158 (249)
T 3f9i_A           90 CNAGITSDTLAIRMKDQDFDKVIDINLKANF-ILNREAIKKMIQKRYGRIINISSIVGIAGN----------PGQANYCA  158 (249)
T ss_dssp             ECCC-------------CHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCCCC--CC----------SCSHHHHH
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCcEEEEEccHHhccCC----------CCCchhHH
Confidence            99997653    2334567889999999986 7766653    3455699999998876532          24678999


Q ss_pred             HHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHH
Q 020880          154 SKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL  226 (320)
Q Consensus       154 sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  226 (320)
                      +|...+.+.+.+       +.++.+++|+.|.++-...     .......... .+.       ....+.+++|+|++++
T Consensus       159 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~~~~~~~-~~~-------~~~~~~~~~dva~~~~  225 (249)
T 3f9i_A          159 SKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK-----LNEKQREAIV-QKI-------PLGTYGIPEDVAYAVA  225 (249)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC-----------CCHHHHHHHH-HHC-------TTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccc-----cCHHHHHHHH-hcC-------CCCCCcCHHHHHHHHH
Confidence            999999877654       2456789999998764321     1111221111 111       2345789999999999


Q ss_pred             HHHhhhhccccccCceeEecCCCC
Q 020880          227 ALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       227 ~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      .++......  ..+.++++.+|..
T Consensus       226 ~l~s~~~~~--~tG~~~~vdgG~~  247 (249)
T 3f9i_A          226 FLASNNASY--ITGQTLHVNGGML  247 (249)
T ss_dssp             HHHSGGGTT--CCSCEEEESTTSS
T ss_pred             HHcCCccCC--ccCcEEEECCCEe
Confidence            999764321  2356999988753

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.92  E-value=5e-24  Score=177.32  Aligned_cols=219  Identities=16%  Similarity=0.161  Sum_probs=158.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-CChhhhhh---hCCCcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      ++|++|||||+|+||++++++|+++|   ++|+...|+. +..+...+   ..+..+.++.+|++|+++++++++    .
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEG---YNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999   8888877754 33333222   234567889999999998877665    3


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++++|++||+||.....    .+.++++..+++|+.+++ ++++++    ++.+..+||++||...+.+.          
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  148 (246)
T 3osu_A           80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVF-NCIQKATPQMLRQRSGAIINLSSVVGAVGN----------  148 (246)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCCEEEEEcchhhcCCC----------
Confidence            46899999999986432    233445678999999996 888877    45566699999998876432          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+.+.+       +.++.+++|+.+.++....     ........ +..+.++       ..+.+.
T Consensus       149 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-----~~~~~~~~-~~~~~p~-------~r~~~~  215 (246)
T 3osu_A          149 PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA-----LSDELKEQ-MLTQIPL-------ARFGQD  215 (246)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC-----SCHHHHHH-HHTTCTT-------CSCBCH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc-----cCHHHHHH-HHhcCCC-------CCCcCH
Confidence            24678999999999877654       3456789999999875421     12222222 2233333       347889


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|+|++++.++.....  ...+.+|++.+|.
T Consensus       216 ~dva~~v~~l~s~~~~--~itG~~i~vdgG~  244 (246)
T 3osu_A          216 TDIANTVAFLASDKAK--YITGQTIHVNGGM  244 (246)
T ss_dssp             HHHHHHHHHHTSGGGT--TCCSCEEEESTTS
T ss_pred             HHHHHHHHHHhCcccc--CCCCCEEEeCCCc
Confidence            9999999999876432  1235599998874

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.92  E-value=7.6e-25  Score=182.91  Aligned_cols=223  Identities=15%  Similarity=0.128  Sum_probs=156.9

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC--CcceEEEeeCCCcccHHHHHHH----h
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--HSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      |++|+||||||+|+||++++++|+++|   ++|+++.|+++..........  ..+.++.+|++|++++.++++.    +
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEG---AKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999   899999998655544433322  4678899999999988877764    3


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccH---HHHHhhhhhccC-ceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSL---VNWLSSFTENKE-NLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|+|||+||.....    ....+++..+++|+.+++   ..+++.+++.+. ++||++||...+.+.          .
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~  150 (251)
T 1zk4_A           81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD----------P  150 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC----------T
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC----------C
Confidence            5799999999976432    122344678899999875   134444556665 699999999887542          2


Q ss_pred             CcchHHHHHHHHHHHHHHH---------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          147 PVNVYGKSKVAAEKFIYEK---------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~---------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      +...|+.+|...|.+.+.+         +.++.++||+.++++.....     .............       ....+++
T Consensus       151 ~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-----~~~~~~~~~~~~~-------~~~~~~~  218 (251)
T 1zk4_A          151 SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-----PGAEEAMSQRTKT-------PMGHIGE  218 (251)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-----TTHHHHHTSTTTC-------TTSSCBC
T ss_pred             CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-----CchhhhHHHhhcC-------CCCCCcC
Confidence            4678999999999877643         34578899999998743211     0011111111111       1235799


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ++|+|++++.++.....  ...+.++++.+|..
T Consensus       219 ~~dva~~~~~l~~~~~~--~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          219 PNDIAYICVYLASNESK--FATGSEFVVDGGYT  249 (251)
T ss_dssp             HHHHHHHHHHHHSGGGT--TCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHcCcccc--cccCcEEEECCCcc
Confidence            99999999999876422  12355899988753

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.92  E-value=1.7e-24  Score=182.17  Aligned_cols=228  Identities=13%  Similarity=0.073  Sum_probs=160.5

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh----CCCcceEEEeeCCCcccHHHHHHH---
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA----LPHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      |++|+||||||+|+||++++++|+++|   ++|++++|+.++.....+.    .+..+.++.+|++|+++++++++.   
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   88 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAG---ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   88 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence            346799999999999999999999999   8999999976654433222    245688899999999988877754   


Q ss_pred             -hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc----c-CceEEEeechhhhcccCCCCcccC
Q 020880           74 -FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN----K-ENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~----~-~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                       ++++|+|||+||.....    ....+++..+++|+.+++ ++++++...    + ..+||++||...+.....   +..
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---~~~  164 (265)
T 1h5q_A           89 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVF-NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS---SLN  164 (265)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE---ETT
T ss_pred             hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHH-HHHHHHHHHHHhcCCCceEEEeCCchhhccccc---ccc
Confidence             35699999999976432    122345677899999986 777776532    2 368999999887643211   112


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                      +..|...|+.+|...|.+++.+       +.++.++||+.++++.....     ....... .....+       ...++
T Consensus       165 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~~~~~~~-~~~~~~-------~~~~~  231 (265)
T 1h5q_A          165 GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM-----DKKIRDH-QASNIP-------LNRFA  231 (265)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-----CHHHHHH-HHHTCT-------TSSCB
T ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc-----chhHHHH-HHhcCc-------ccCCC
Confidence            3345779999999999988764       35678999999998753211     1111111 111111       23478


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +++|+|++++.++.....  ...+..|++.+|..
T Consensus       232 ~~~dva~~~~~l~~~~~~--~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          232 QPEEMTGQAILLLSDHAT--YMTGGEYFIDGGQL  263 (265)
T ss_dssp             CGGGGHHHHHHHHSGGGT--TCCSCEEEECTTGG
T ss_pred             CHHHHHHHHHhhccCchh--cCcCcEEEecCCEe
Confidence            999999999999876421  12355899988753

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=5.7e-25  Score=183.06  Aligned_cols=223  Identities=17%  Similarity=0.104  Sum_probs=158.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ++|++|||||+|+||++++++|+++|   ++|+++.|++++...+. .. .++.++.+|++|+++++++.+.++++|+||
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~~~~~~~~~id~lv   79 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREG---AKVIATDINESKLQELE-KY-PGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHGGGG-GS-TTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHH-hc-cCceEEEeeCCCHHHHHHHHHHhCCCCEEE
Confidence            46899999999999999999999999   89999999865554443 33 257789999999999998888788899999


Q ss_pred             ECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcchHHH
Q 020880           82 NCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGK  153 (320)
Q Consensus        82 h~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~  153 (320)
                      |+||......    ...+++..+++|+.+++ ++++++.    +.+..++|++||...+....         .+...|+.
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~~Y~~  149 (246)
T 2ag5_A           80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMY-LMIKAFLPKMLAQKSGNIINMSSVASSVKGV---------VNRCVYST  149 (246)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCSBTTTBCC---------TTBHHHHH
T ss_pred             ECCccCCCCCcccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCceEEEEechHhCcCCC---------CCCccHHH
Confidence            9999765421    22345677899999986 7777664    34566999999987764321         14678999


Q ss_pred             HHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCC-CCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHH
Q 020880          154 SKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVP-KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII  225 (320)
Q Consensus       154 sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  225 (320)
                      +|...+.+.+.+       +.++.++||+.++++....... ............ ...+       ...+.+.+|+|+++
T Consensus       150 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~dvA~~v  221 (246)
T 2ag5_A          150 TKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFL-KRQK-------TGRFATAEEIAMLC  221 (246)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHH-HTCT-------TSSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHH-hcCC-------CCCCCCHHHHHHHH
Confidence            999999988764       4567899999999874210000 000011111111 1111       12478999999999


Q ss_pred             HHHHhhhhccccccCceeEecCCC
Q 020880          226 LALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +.++.....  ...+.++++.+|.
T Consensus       222 ~~l~s~~~~--~~tG~~i~vdgG~  243 (246)
T 2ag5_A          222 VYLASDESA--YVTGNPVIIDGGW  243 (246)
T ss_dssp             HHHHSGGGT--TCCSCEEEECTTG
T ss_pred             HHHhCcccc--CCCCCEEEECCCc
Confidence            999865432  1235589998763

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.92  E-value=1e-24  Score=182.85  Aligned_cols=221  Identities=16%  Similarity=0.129  Sum_probs=157.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC-CCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~-~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      .+|+||||||+|+||++++++|+++|   ++|++++|+ ++....+.+.   .+.++.++.+|++|++++.++++.    
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAG---AKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAK   82 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999   899999998 6655444332   245688899999999988777653    


Q ss_pred             hCCCCEEEECCCc-cCcc----ccccCchhhhhccccccHHHHHhhhh----hcc--C---ceEEEeechhhhcccCCCC
Q 020880           74 FGQPDVVVNCAAL-SVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENK--E---NLLIHLSTDQVYEGVKSFY  139 (320)
Q Consensus        74 ~~~~d~Vih~a~~-~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~--~---~~~v~~Ss~~vy~~~~~~~  139 (320)
                      ++++|+|||+||. ....    ....+++..+++|+.+++ ++++++.    +.+  .   .++|++||...+..     
T Consensus        83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----  156 (258)
T 3afn_B           83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVV-MTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG-----  156 (258)
T ss_dssp             HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-----
T ss_pred             cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHH-HHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-----
Confidence            3589999999997 3221    122235667899999986 6666553    222  2   59999999887641     


Q ss_pred             cccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcc
Q 020880          140 KEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       140 ~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                          +..+...|+.+|...|.+++.+       +.++.++||+.++++.....     ...+... +..+.+       .
T Consensus       157 ----~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~~~~~~~-~~~~~~-------~  219 (258)
T 3afn_B          157 ----GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK-----TQDVRDR-ISNGIP-------M  219 (258)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC-----CHHHHHH-HHTTCT-------T
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc-----CHHHHHH-HhccCC-------C
Confidence                1224678999999999987764       45678999999998754211     1122222 222222       2


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ..+++++|+|++++.++...... ...+.+|++++|.
T Consensus       220 ~~~~~~~dva~~~~~l~~~~~~~-~~~G~~~~v~gg~  255 (258)
T 3afn_B          220 GRFGTAEEMAPAFLFFASHLASG-YITGQVLDINGGQ  255 (258)
T ss_dssp             CSCBCGGGTHHHHHHHHCHHHHT-TCCSEEEEESTTS
T ss_pred             CcCCCHHHHHHHHHHHhCcchhc-cccCCEEeECCCc
Confidence            35899999999999998764320 1124589998875

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.92  E-value=1.4e-24  Score=181.41  Aligned_cols=229  Identities=15%  Similarity=0.091  Sum_probs=164.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~d   78 (320)
                      +|+++||||+|+||++++++|+++|   ++|++..|+++....+.+.++..+.++.+|++|++++.++++    .++++|
T Consensus         8 gk~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (255)
T 4eso_A            8 GKKAIVIGGTHGMGLATVRRLVEGG---AEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID   84 (255)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            4799999999999999999999999   899999999777666665555678889999999998877664    346899


Q ss_pred             EEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCCcchHH
Q 020880           79 VVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYG  152 (320)
Q Consensus        79 ~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~  152 (320)
                      ++||+||......    +.++++..+++|+.+++ ++++++...  ...+||++||...+.+.          .+...|+
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~Y~  153 (255)
T 4eso_A           85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAF-FTVQRLTPLIREGGSIVFTSSVADEGGH----------PGMSVYS  153 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHGGGEEEEEEEEEECCGGGSSBC----------TTBHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHhcCCEEEEECChhhcCCC----------CCchHHH
Confidence            9999999865422    33455778999999996 888877653  12489999999877542          2467899


Q ss_pred             HHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHH
Q 020880          153 KSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII  225 (320)
Q Consensus       153 ~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  225 (320)
                      .+|...+.+.+.+       +.++..++|+.|..+..............+........+       ...+.+.+|+|+++
T Consensus       154 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~pedvA~~v  226 (255)
T 4eso_A          154 ASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITP-------MKRNGTADEVARAV  226 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHST-------TSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCC-------CCCCcCHHHHHHHH
Confidence            9999999977754       356788999999887532110000000111111111111       23467899999999


Q ss_pred             HHHHhhhhccccccCceeEecCCCCcCHHH
Q 020880          226 LALTNRWLSEDKQMQLLLNVGGPDRVSRVQ  255 (320)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e  255 (320)
                      +.++.. .  ....+.++++.+|...++.+
T Consensus       227 ~~L~s~-~--~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          227 LFLAFE-A--TFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             HHHHHT-C--TTCCSCEEEESTTTTTTBCC
T ss_pred             HHHcCc-C--cCccCCEEEECCCccccCcC
Confidence            988874 2  12335699999987766543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.92  E-value=6.4e-24  Score=177.49  Aligned_cols=221  Identities=16%  Similarity=0.147  Sum_probs=157.9

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQ   76 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~   76 (320)
                      |++|++|||||+|+||++++++|+++|   ++|+++.|++++.....+.++..+.++.+|++|++++.++++    .+++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAG---ARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999   899999998766555555444467788999999998877665    3468


Q ss_pred             CCEEEECCCccCcc----ccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           77 PDVVVNCAALSVPR----VCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        77 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      +|+|||+||.....    .+..+++..+++|+.+++   ..+++.+++.+..+||++||...+.+.          .+..
T Consensus        80 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  149 (254)
T 1hdc_A           80 VDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL----------ALTS  149 (254)
T ss_dssp             CCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TTCH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC----------CCch
Confidence            99999999976432    223345678899999985   145555556666799999999877532          2467


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC-cccCce-eHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCPV-YVRD  220 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i-~v~D  220 (320)
                      .|+.+|...+.+.+.+       +.++.++||+.++++...             . ......-.+... ....+. +.+|
T Consensus       150 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------------~-~~~~~~~~~~~~~p~~~~~~~~~d  215 (254)
T 1hdc_A          150 SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA-------------E-TGIRQGEGNYPNTPMGRVGNEPGE  215 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------------H-HTCCCSTTSCTTSTTSSCB-CHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcccc-------------c-cchhHHHHHHhcCCCCCCCCCHHH
Confidence            8999999999977764       345788999999876311             0 000000000000 122367 9999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +|++++.++.....  ...+.++++.+|..
T Consensus       216 vA~~v~~l~s~~~~--~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          216 IAGAVVKLLSDTSS--YVTGAELAVDGGWT  243 (254)
T ss_dssp             HHHHHHHHHSGGGT--TCCSCEEEESTTTT
T ss_pred             HHHHHHHHhCchhc--CCCCCEEEECCCcc
Confidence            99999999876422  12355899988754

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.92  E-value=3.4e-24  Score=181.70  Aligned_cols=229  Identities=13%  Similarity=0.143  Sum_probs=154.4

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-CChhhhhhh----CCCcceEEEeeCCCcccHHHHHHH--
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLDA----LPHSFVFFDVDLKSGSGFDAVALK--   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~--   73 (320)
                      |++|++|||||+|+||++++++|+++|   ++|++.+|+. +......+.    .+..+.++.+|++|++++.++++.  
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   99 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAG---ANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA   99 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            346899999999999999999999999   8999999854 333322221    145678899999999988777653  


Q ss_pred             --hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccC
Q 020880           74 --FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        74 --~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                        ++++|+|||+||......    +.++++..+++|+.+++ ++++++    ++.+..+||++||...+.+.        
T Consensus       100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  170 (281)
T 3v2h_A          100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSF-HTIRGAIPPMKKKGWGRIINIASAHGLVAS--------  170 (281)
T ss_dssp             HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------
T ss_pred             HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCCEEEEECCcccccCC--------
Confidence              468999999999864422    23445678999999996 777776    45555699999998876432        


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCc---eEeecCccc
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEK---VEFFHDECR  213 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  213 (320)
                        .+...|+.+|...+.+.+.+       +.++.+++|+.|.++..........    ..........   ....+...+
T Consensus       171 --~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~p~~  244 (281)
T 3v2h_A          171 --PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQA----RTRGITEEQVINEVMLKGQPTK  244 (281)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------------------------------CCTTC
T ss_pred             --CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhh----hhcCCCHHHHHHHHHHhcCCCC
Confidence              23568999999999987754       3456789999998875321111000    0000000000   011122346


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .+++++|+|++++.++.....  ...+.++++.+|.
T Consensus       245 r~~~~edvA~~v~~L~s~~a~--~itG~~i~vdGG~  278 (281)
T 3v2h_A          245 KFITVEQVASLALYLAGDDAA--QITGTHVSMDGGW  278 (281)
T ss_dssp             SCBCHHHHHHHHHHHHSSGGG--GCCSCEEEESTTG
T ss_pred             CccCHHHHHHHHHHHcCCCcC--CCCCcEEEECCCc
Confidence            789999999999999876432  1235599998873

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.92  E-value=5.6e-24  Score=180.91  Aligned_cols=219  Identities=14%  Similarity=0.103  Sum_probs=154.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      ++|+|+||||+|+||+++++.|+++|   ++|++..|++++.....+.   .+..+.++.+|++|+++++++++.    +
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSV---SHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTS---SEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcC---CEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999   8899888876554433322   244678899999999998887754    3


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|+|||+||.....    .+..+++..+++|+.+++ ++++++.    +.+.++||++||...+.+.          .
T Consensus       120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~  188 (285)
T 2c07_A          120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLF-YITQPISKRMINNRYGRIINISSIVGLTGN----------V  188 (285)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHH-HHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------T
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhCCCCEEEEECChhhccCC----------C
Confidence            6899999999976432    223345678899999985 6666654    4566799999998766432          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+.+.+       +.++.++||+.+.++....     ........ .....+       ...+++++
T Consensus       189 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----~~~~~~~~-~~~~~~-------~~~~~~~~  255 (285)
T 2c07_A          189 GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-----ISEQIKKN-IISNIP-------AGRMGTPE  255 (285)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------CCHHHHHH-HHTTCT-------TSSCBCHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh-----cCHHHHHH-HHhhCC-------CCCCCCHH
Confidence            3668999999999877654       3467889999998874321     11122222 212211       12478999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+|++++.++.....  ...+.++++.+|.
T Consensus       256 dvA~~~~~l~~~~~~--~~~G~~i~v~gG~  283 (285)
T 2c07_A          256 EVANLACFLSSDKSG--YINGRVFVIDGGL  283 (285)
T ss_dssp             HHHHHHHHHHSGGGT--TCCSCEEEESTTS
T ss_pred             HHHHHHHHHhCCCcC--CCCCCEEEeCCCc
Confidence            999999999876432  1235589998764

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=4.2e-24  Score=177.35  Aligned_cols=211  Identities=13%  Similarity=0.154  Sum_probs=154.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH---hCCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK---FGQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~~d~   79 (320)
                      +|+||||||||+||++++++|+++|   ++|+++.|+++ .        ..+.++.+|++|++++.++++.   ++++|+
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~-~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~   69 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARG---YRVVVLDLRRE-G--------EDLIYVEGDVTREEDVRRAVARAQEEAPLFA   69 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEESSCC-S--------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEccCcc-c--------cceEEEeCCCCCHHHHHHHHHHHHhhCCceE
Confidence            5789999999999999999999999   89999999865 2        2357799999999998877763   357899


Q ss_pred             EEECCCccCccccc----c----CchhhhhccccccHHHHHhhhhhc----c------CceEEEeechhhhcccCCCCcc
Q 020880           80 VVNCAALSVPRVCE----N----DPDSAMSINVPSSLVNWLSSFTEN----K------ENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        80 Vih~a~~~~~~~~~----~----~~~~~~~~n~~~~~~~~l~~~~~~----~------~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                      |||+||........    .    +++..+++|+.+++ ++++++.+.    +      ..+||++||...+.+.      
T Consensus        70 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  142 (242)
T 1uay_A           70 VVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTF-NVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ------  142 (242)
T ss_dssp             EEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHH-HHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC------
T ss_pred             EEEcccccCcccccccccccchHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC------
Confidence            99999976432111    1    45678899999986 888777542    1      1389999999887642      


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                          .+...|+.+|...+.+.+.+       +.++.++||+.++++....     ....+. ..+....++      ...
T Consensus       143 ----~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-----~~~~~~-~~~~~~~~~------~~~  206 (242)
T 1uay_A          143 ----IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-----LPEKAK-ASLAAQVPF------PPR  206 (242)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-----SCHHHH-HHHHTTCCS------SCS
T ss_pred             ----CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc-----cchhHH-HHHHhhCCC------ccc
Confidence                24678999999999877654       4567899999999875321     111122 222222222      024


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      +++++|+|++++.++....    ..+..|++.+|..++
T Consensus       207 ~~~~~dva~~~~~l~~~~~----~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          207 LGRPEEYAALVLHILENPM----LNGEVVRLDGALRMA  240 (242)
T ss_dssp             CCCHHHHHHHHHHHHHCTT----CCSCEEEESTTCCCC
T ss_pred             CCCHHHHHHHHHHHhcCCC----CCCcEEEEcCCeecC
Confidence            7899999999999998622    235589999886553

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.92  E-value=8.8e-24  Score=176.01  Aligned_cols=221  Identities=14%  Similarity=0.091  Sum_probs=160.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHHh----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      ++|+++||||+|+||++++++|+++|   ++|++..|+++....+...   .+..+.++.+|++|+++++++++.+    
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKG---ATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999   8999999987665544332   2456888999999999988877643    


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|+|||+||.....    .+..+++..+++|+.+++ ++++++.    +.+..++|++||...+.+.          .
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  149 (247)
T 3lyl_A           81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIF-RMSKECVRGMMKKRWGRIISIGSVVGSAGN----------P  149 (247)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------T
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCeEEEEEcchhhccCC----------C
Confidence            5799999999986542    233445678999999986 7776654    3444599999998876432          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+.+.+       +.++.+++|+.+..+-...     ..... ........+       ...+.+++
T Consensus       150 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~~-~~~~~~~~~-------~~~~~~~~  216 (247)
T 3lyl_A          150 GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDK-----LTDEQ-KSFIATKIP-------SGQIGEPK  216 (247)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT-----SCHHH-HHHHHTTST-------TCCCBCHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchh-----ccHHH-HHHHhhcCC-------CCCCcCHH
Confidence            3678999999888877654       3456789999998765321     11111 122222222       23578999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      |+|++++.++......  ..+.++++.+|...
T Consensus       217 dva~~i~~l~s~~~~~--~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          217 DIAAAVAFLASEEAKY--ITGQTLHVNGGMYM  246 (247)
T ss_dssp             HHHHHHHHHHSGGGTT--CCSCEEEESTTSSC
T ss_pred             HHHHHHHHHhCCCcCC--ccCCEEEECCCEec
Confidence            9999999998764321  23569999887644

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.92  E-value=3.8e-24  Score=180.81  Aligned_cols=225  Identities=17%  Similarity=0.156  Sum_probs=154.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+|+++||||+|+||++++++|+++|   ++|+++.|+++......+.   .+..+.++.+|++|++++.++++.    +
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLG---ARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35799999999999999999999999   8999999986554443322   244678899999999988877753    3


Q ss_pred             -CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 -GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                       +++|+|||+||.....    ....+++..+++|+.+++ ++++++.    +.+..+||++||...+.+.          
T Consensus        97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------  165 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY-HLSQIAYPLLKASQNGNVIFLSSIAGFSAL----------  165 (273)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTSEEEEEECCGGGTSCC----------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCcEEEEEcCHhhcCCC----------
Confidence             6899999999976432    123345677889999986 7777663    4455699999999887642          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCC-ChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKS-LPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      .+...|+.+|...+.+.+.+       +.++.+++|+.++++......... .......... ...+       ...+.+
T Consensus       166 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~p-------~~r~~~  237 (273)
T 1ae1_A          166 PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFI-VKTP-------MGRAGK  237 (273)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHH-HHST-------TCSCBC
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHH-hcCC-------CCCCcC
Confidence            23678999999999977764       456788999999987532110000 0001111111 1111       124789


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      .+|+|++++.++.....  ...+.++++.+|..
T Consensus       238 p~dvA~~v~~l~s~~~~--~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          238 PQEVSALIAFLCFPAAS--YITGQIIWADGGFT  268 (273)
T ss_dssp             HHHHHHHHHHHHSGGGT--TCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhCcccc--CcCCCEEEECCCcc
Confidence            99999999998865322  12355899988743

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.92  E-value=9.9e-24  Score=175.85  Aligned_cols=221  Identities=17%  Similarity=0.160  Sum_probs=152.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-CChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQ   76 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~   76 (320)
                      ++|++|||||+|+||++++++|+++|   ++|++++|++ +.........+..+.++.+|++|++++.++++.    +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEG---ADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999   8999999987 444433334455688899999999988777653    468


Q ss_pred             CCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhh----hhhccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           77 PDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSS----FTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        77 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      +|+|||+||.....    .+.++++..+++|+.+++ +++++    +++.+..+||++||...+.+.          .+.
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~  151 (249)
T 2ew8_A           83 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGF-LMAKAFVPGMKRNGWGRIINLTSTTYWLKI----------EAY  151 (249)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGGSCC----------SSC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCeEEEEEcchhhccCC----------CCc
Confidence            99999999976432    123345678899999985 66666    555566799999999887532          246


Q ss_pred             chHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          149 NVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      ..|+.+|...+.+.+.+       +.++.+++|+.+.++........    . ..... ... .    .....+.+.+|+
T Consensus       152 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~-~~~~~-~~~-~----~~~~~~~~p~dv  220 (249)
T 2ew8_A          152 THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS----A-MFDVL-PNM-L----QAIPRLQVPLDL  220 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------------CT-T----SSSCSCCCTHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhcccc----c-hhhHH-HHh-h----CccCCCCCHHHH
Confidence            78999999999987764       34678899999987643100000    0 00000 000 0    112347899999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCCC
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |++++.++.....  ...+.++++.+|.
T Consensus       221 a~~~~~l~s~~~~--~~tG~~~~vdGG~  246 (249)
T 2ew8_A          221 TGAAAFLASDDAS--FITGQTLAVDGGM  246 (249)
T ss_dssp             HHHHHHHTSGGGT--TCCSCEEEESSSC
T ss_pred             HHHHHHHcCcccC--CCCCcEEEECCCc
Confidence            9999999875321  1235589998774

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.92  E-value=2e-24  Score=180.72  Aligned_cols=224  Identities=15%  Similarity=0.111  Sum_probs=161.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++.+|+.+..+...+.   .+..+.++.+|++|+++++++++    .+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAG---ASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF   87 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHT---CEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            36899999999999999999999999   8999999987655544332   34578889999999998777665    34


Q ss_pred             CCCCEEEECCCccCcc---ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           75 GQPDVVVNCAALSVPR---VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +++|++||+||.....   .+..+++..+++|+.+++ ++++++    ++.+..+||++||...+.+.          .+
T Consensus        88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~  156 (256)
T 3gaf_A           88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLF-RLSQLAAPHMQKAGGGAILNISSMAGENTN----------VR  156 (256)
T ss_dssp             SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCEEEEEECCGGGTCCC----------TT
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCcEEEEEcCHHHcCCC----------CC
Confidence            6899999999986542   233455678999999996 777776    34455699999999876432          24


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+.+.+       +.++..++|+.|..+.....    ...... ..+....+       ...+.+++|
T Consensus       157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----~~~~~~-~~~~~~~p-------~~r~~~~~d  224 (256)
T 3gaf_A          157 MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV----LTPEIE-RAMLKHTP-------LGRLGEAQD  224 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH----CCHHHH-HHHHTTCT-------TSSCBCHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc----cCHHHH-HHHHhcCC-------CCCCCCHHH
Confidence            678999999999987764       24567899999876532100    001111 11222222       235789999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCcCH
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR  253 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~  253 (320)
                      +|++++.++.....  ...+.++++.+|...++
T Consensus       225 va~~~~~L~s~~~~--~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          225 IANAALFLCSPAAA--WISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             HHHHHHHHHSGGGT--TCCSCEEEESTTSCCC-
T ss_pred             HHHHHHHHcCCccc--CccCCEEEECCCccccC
Confidence            99999999875432  12356999999876654

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.92  E-value=4e-24  Score=179.48  Aligned_cols=224  Identities=19%  Similarity=0.122  Sum_probs=157.6

Q ss_pred             CCcEEEEEcCC--ChhhHHHHHHHhhccCCCceEEEecCCCC---ChhhhhhhCCCcceEEEeeCCCcccHHHHHHH---
Q 020880            2 SKKRVLVVGGT--GYLGQHLLQGLSEIEGKPYDVAATHHSTP---LPQLLLDALPHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         2 ~~~~ilItGat--G~IG~~l~~~L~~~g~~v~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      ++|++|||||+  |+||++++++|+++|   ++|+++.|+++   ....+....+ .+.++.+|++|++++.++++.   
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAG---AEVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHT---CEEEEEESCGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHHHH
Confidence            46799999999  999999999999999   89999999864   1222222222 367899999999988776653   


Q ss_pred             -hCCCCEEEECCCccCc--------cccccCchhhhhccccccHHHHHhhhhhcc--CceEEEeechhhhcccCCCCccc
Q 020880           74 -FGQPDVVVNCAALSVP--------RVCENDPDSAMSINVPSSLVNWLSSFTENK--ENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~--~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                       ++++|+|||+||....        ..+..+++..+++|+.+++ ++++++...-  ..+||++||...+.+.       
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~g~iv~isS~~~~~~~-------  154 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLV-AVARRAEPLLREGGGIVTLTYYASEKVV-------  154 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHTTTEEEEEEEEEEECGGGTSBC-------
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHhccCCEEEEEecccccCCC-------
Confidence             4689999999997642        1233455678999999996 8888887641  2499999998776432       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                         .+...|+.+|...+.+.+.+       +.++.+++|+.|+++.....   ........... ...++       ..+
T Consensus       155 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~-~~~p~-------~~~  220 (261)
T 2wyu_A          155 ---PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI---PGFTKMYDRVA-QTAPL-------RRN  220 (261)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC---TTHHHHHHHHH-HHSTT-------SSC
T ss_pred             ---CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc---cccHHHHHHHH-hcCCC-------CCC
Confidence               23568999999999977654       45778999999998753211   01111222111 11121       236


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCH
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR  253 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~  253 (320)
                      .+++|+|++++.++.....  ...+.+|++.+|...+.
T Consensus       221 ~~~~dva~~v~~l~s~~~~--~~tG~~~~vdgG~~~~~  256 (261)
T 2wyu_A          221 ITQEEVGNLGLFLLSPLAS--GITGEVVYVDAGYHIMG  256 (261)
T ss_dssp             CCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTGGGBC
T ss_pred             CCHHHHHHHHHHHcChhhc--CCCCCEEEECCCccccC
Confidence            7899999999999865322  12355899998865543

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=1e-23  Score=176.43  Aligned_cols=224  Identities=18%  Similarity=0.143  Sum_probs=155.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      ++|++|||||+|+||++++++|+++|   ++|+++.|+++. ....+... . .++.+|++|++++.++++    .++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREG---ALVALCDLRPEG-KEVAEAIG-G-AFFQVDLEDERERVRFVEEAAYALGRV   78 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTTH-HHHHHHHT-C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChhH-HHHHHHhh-C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999   899999998766 44444333 3 678999999998877665    34689


Q ss_pred             CEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||......    ...+++..+++|+.+++ ++++++.    +.+..+||++||...+.+.          .+..
T Consensus        79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~  147 (256)
T 2d1y_A           79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPM-HLSALAAREMRKVGGGAIVNVASVQGLFAE----------QENA  147 (256)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHTTTCEEEEEECCGGGTSBC----------TTBH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCcEEEEEccccccCCC----------CCCh
Confidence            99999999764321    22344678899999986 7776664    3456799999998876432          2467


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEee--cCcccCceeHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFF--HDECRCPVYVRD  220 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D  220 (320)
                      .|+.+|...+.+.+.+       +.++.+++|+.+..+...         ..+.............  ......+++++|
T Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  218 (256)
T 2d1y_A          148 AYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVL---------EAIALSPDPERTRRDWEDLHALRRLGKPEE  218 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH---------HHHC--------CHHHHTTSTTSSCBCHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhh---------hccccccCCHHHHHHHHhcCCCCCCcCHHH
Confidence            8999999999987764       345678999988754210         0000000000000000  112346899999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCcCH
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR  253 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~  253 (320)
                      +|++++.++.....  ...+.+|++.+|...++
T Consensus       219 vA~~~~~l~s~~~~--~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          219 VAEAVLFLASEKAS--FITGAILPVDGGMTASF  249 (256)
T ss_dssp             HHHHHHHHHSGGGT--TCCSCEEEESTTGGGBC
T ss_pred             HHHHHHHHhCchhc--CCCCCEEEECCCccccc
Confidence            99999999876422  12355899998865543

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.92  E-value=5.6e-24  Score=177.79  Aligned_cols=225  Identities=19%  Similarity=0.218  Sum_probs=157.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQ   76 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~   76 (320)
                      |++|++|||||+|+||++++++|+++|   ++|+++.|+.+....+.+.++..+.++.+|++|++++.++++.    +++
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEG---AKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999   8999999987665555444445678899999999988776653    467


Q ss_pred             CCEEEECCCccCcc----ccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           77 PDVVVNCAALSVPR----VCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        77 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      +|+|||+||.....    ....+++..+++|+.+++   ..++..+++.+ .+||++||...+.+.          .+..
T Consensus        81 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----------~~~~  149 (253)
T 1hxh_A           81 LNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI----------EQYA  149 (253)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC----------TTBH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCC----------CCCc
Confidence            99999999976432    123345678899998875   13444555566 799999999887532          2467


Q ss_pred             hHHHHHHHHHHHHHHH---------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          150 VYGKSKVAAEKFIYEK---------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~---------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      .|+.+|...+.+.+.+         +.++.++||+.++++...........    ...+.....    ......+.+.+|
T Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~----~~p~~~~~~~~d  221 (253)
T 1hxh_A          150 GYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVS----KEMVLHDPK----LNRAGRAYMPER  221 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCC----HHHHBCBTT----TBTTCCEECHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhh----HHHHhhhhc----cCccCCCCCHHH
Confidence            8999999999977764         56778999999998642110000000    000111000    001234789999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|++++.++..+..  ...+..+++.+|.
T Consensus       222 vA~~~~~l~s~~~~--~~tG~~~~vdgG~  248 (253)
T 1hxh_A          222 IAQLVLFLASDESS--VMSGSELHADNSI  248 (253)
T ss_dssp             HHHHHHHHHSGGGT--TCCSCEEEESSSC
T ss_pred             HHHHHHHHcCcccc--CCCCcEEEECCCc
Confidence            99999999876432  1235589998874

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.92  E-value=4.8e-24  Score=180.33  Aligned_cols=227  Identities=16%  Similarity=0.146  Sum_probs=161.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      ++|++|||||+|+||++++++|+++|   ++|++.+|+.+......+..+..+.++.+|++|+++++++++.    ++++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNG---AYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV  102 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999   8999999997776666665566788899999999988776653    4689


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||.....    .+.++++..+++|+.+++ ++++++    ++.+..+||++||...+.+.          .+..
T Consensus       103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  171 (277)
T 4dqx_A          103 DVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIF-LCSKYVIPVMRRNGGGSIINTTSYTATSAI----------ADRT  171 (277)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHH-HHHHHHHHHHTTTTCEEEEEECCGGGTSCC----------TTBH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCcEEEEECchhhCcCC----------CCCh
Confidence            9999999976442    222345677889999986 666665    44555699999999887532          3467


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCC-CCCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISP-VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      .|+.||...+.+.+.+       +.++.+++||.|..+..... ........... ......+       ...+.+++|+
T Consensus       172 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~r~~~pedv  243 (277)
T 4dqx_A          172 AYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRS-DFNARAV-------MDRMGTAEEI  243 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHH-HHHTTST-------TCSCBCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHH-HHHhcCc-------ccCCcCHHHH
Confidence            8999999999987764       24567899999976531000 00000001110 0111111       2347899999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      |++++.++.....  -..+.++++.+|...+
T Consensus       244 A~~v~~L~s~~~~--~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          244 AEAMLFLASDRSR--FATGSILTVDGGSSIG  272 (277)
T ss_dssp             HHHHHHHHSGGGT--TCCSCEEEESSSSSSC
T ss_pred             HHHHHHHhCCccC--CCcCCEEEECCchhhh
Confidence            9999999876432  1235599999886553

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.92  E-value=3e-24  Score=178.58  Aligned_cols=219  Identities=15%  Similarity=0.135  Sum_probs=152.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEe-cCCCCChhhhhhh---CCCcceE-EEeeCCCcccHHHHHHH----
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDA---LPHSFVF-FDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~~~~~~---~~~~~~~-~~~Dl~d~~~~~~~~~~----   73 (320)
                      ||+|+||||+|+||++++++|+++|   ++|+++ .|+.+....+.+.   .+..+.+ +.+|++|.+++.++++.    
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G---~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDG---FALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEV   77 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHh
Confidence            5789999999999999999999999   889887 7876554433222   2345566 88999999988777653    


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++++|+|||+||.....    .+..+++..+++|+.+++   ..+++.+++.+.++||++||...+.+.          .
T Consensus        78 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~  147 (245)
T 2ph3_A           78 LGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN----------P  147 (245)
T ss_dssp             HTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------S
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC----------C
Confidence            46899999999976432    123345678899999964   234444555667799999998765322          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+.+.+       +.++.++||+.++++....     .......... ...+       ...+++++
T Consensus       148 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----~~~~~~~~~~-~~~~-------~~~~~~~~  214 (245)
T 2ph3_A          148 GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER-----LPQEVKEAYL-KQIP-------AGRFGRPE  214 (245)
T ss_dssp             SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-----SCHHHHHHHH-HTCT-------TCSCBCHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-----cCHHHHHHHH-hcCC-------CCCCcCHH
Confidence            3678999999998877654       3467899999998864321     1111222111 1211       23578999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+|++++.++..+..  ...+.+|++++|.
T Consensus       215 dva~~~~~l~~~~~~--~~~G~~~~v~gg~  242 (245)
T 2ph3_A          215 EVAEAVAFLVSEKAG--YITGQTLCVDGGL  242 (245)
T ss_dssp             HHHHHHHHHTSGGGT--TCCSCEEEESTTC
T ss_pred             HHHHHHHHHhCcccc--cccCCEEEECCCC
Confidence            999999999876321  1235589998764

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.92  E-value=4.3e-24  Score=178.85  Aligned_cols=224  Identities=11%  Similarity=0.119  Sum_probs=160.3

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      |++|++|||||+|+||.+++++|+++|   ++|++.+|+.++.......   .+..+.++.+|++|++++.++++.    
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEG---ARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            567899999999999999999999999   8999999987665554433   245688899999999988777654    


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh-----hhccCceEEEeechhhhcccCCCCcccCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF-----TENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~-----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      ++++|++||+||.....    .+.++++..+++|+.+++ ++++++     ++.+..++|++||...+...         
T Consensus        81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~-~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  150 (257)
T 3imf_A           81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTF-YCSQAIGKYWIEKGIKGNIINMVATYAWDAG---------  150 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHTCCCEEEEECCGGGGSCC---------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhhCCCcEEEEECchhhccCC---------
Confidence            46899999999975432    223345678999999986 777776     33335699999998876432         


Q ss_pred             CCCcchHHHHHHHHHHHHHH--------HcCCeeEEeecccccCCCCCCC--CCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          145 IAPVNVYGKSKVAAEKFIYE--------KCSNFAILRSSIIYGPQTISPV--PKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~--------~~~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                       .+...|+.||...+.+.+.        .+.++.+++|+.|.++......  .....     .......+       ...
T Consensus       151 -~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~-----~~~~~~~p-------~~r  217 (257)
T 3imf_A          151 -PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMA-----KRTIQSVP-------LGR  217 (257)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCS-----HHHHTTST-------TCS
T ss_pred             -CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHH-----HHHHhcCC-------CCC
Confidence             2366899999999886653        2467788999999887532110  00000     11111111       234


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      +.+.+|+|++++.++.....  -..+.++++.+|...+
T Consensus       218 ~~~pedvA~~v~~L~s~~~~--~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          218 LGTPEEIAGLAYYLCSDEAA--YINGTCMTMDGGQHLH  253 (257)
T ss_dssp             CBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTTTSC
T ss_pred             CcCHHHHHHHHHHHcCchhc--CccCCEEEECCCcccC
Confidence            78999999999999876432  1235599999886543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.92  E-value=4.7e-24  Score=179.13  Aligned_cols=227  Identities=14%  Similarity=0.109  Sum_probs=153.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      ++|++|||||+|+||++++++|+++|   ++|++..|+.++...+.+.++..+.++.+|++|.+++.++++.    ++++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   84 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGG---AKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKV   84 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            36899999999999999999999999   8999999998777776666667788999999999988776653    4689


Q ss_pred             CEEEECCCccCcc-----ccccCchhhhhccccccHHHHHhhhhh----cc----CceEEEeechhhhcccCCCCcccCC
Q 020880           78 DVVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLSSFTE----NK----ENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        78 d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~----~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      |+|||+||.....     ...++++..+++|+.+++ ++++++..    .+    ..++|++||...+.+.         
T Consensus        85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  154 (261)
T 3n74_A           85 DILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVY-LMTSKLIPHFKENGAKGQECVILNVASTGAGRPR---------  154 (261)
T ss_dssp             CEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC---------
T ss_pred             CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC---------
Confidence            9999999986421     122345678899999985 66666543    21    3369999998876432         


Q ss_pred             CCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       .+...|+.+|...+.+.+.+.       .++..++|+.+..+-....... ...... ..+..       ......+++
T Consensus       155 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~-~~~~~-------~~~~~~~~~  224 (261)
T 3n74_A          155 -PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGE-DSEEIR-KKFRD-------SIPMGRLLK  224 (261)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------------CTTSSCCC
T ss_pred             -CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhccc-CcHHHH-HHHhh-------cCCcCCCcC
Confidence             235689999999999877642       3567899999987643211000 000000 00001       112345899


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCCcCH
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR  253 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~  253 (320)
                      ++|+|++++.++.....  ...+.++++.+|..++-
T Consensus       225 ~~dva~~~~~l~s~~~~--~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          225 PDDLAEAAAFLCSPQAS--MITGVALDVDGGRSIGG  258 (261)
T ss_dssp             HHHHHHHHHHHTSGGGT--TCCSCEEEESTTTTC--
T ss_pred             HHHHHHHHHHHcCCccc--CcCCcEEEecCCcccCC
Confidence            99999999999865432  12356999999876654

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.92  E-value=2.5e-23  Score=173.55  Aligned_cols=222  Identities=15%  Similarity=0.137  Sum_probs=147.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      ++|++|||||+|+||++++++|+++|   ++|+++.|+.+..     ..  .+.++.+|++|++++.++++.    ++++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~-----~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   75 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAG---AKVTGFDQAFTQE-----QY--PFATEVMDVADAAQVAQVCQRLLAETERL   75 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCCCSS-----CC--SSEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCchhhh-----cC--CceEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45899999999999999999999999   8999999986531     11  267789999999988877753    4689


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||.....    .+..+++..+++|+.+++ ++++++    ++.+..+||++||...+.+          ..+..
T Consensus        76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~m~~~~~g~iv~isS~~~~~~----------~~~~~  144 (250)
T 2fwm_X           76 DALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAF-NLFQQTMNQFRRQRGGAIVTVASDAAHTP----------RIGMS  144 (250)
T ss_dssp             CEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEECCGGGTSC----------CTTCH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHH-HHHHHHHHHHHhcCCCEEEEECchhhCCC----------CCCCc
Confidence            9999999975432    123456788999999986 777776    4555679999999987643          22467


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhc-CCceEeecCcccCceeHHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSK-GEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~  221 (320)
                      .|+.+|...+.+.+.+       +.++.++||+.+.++........   .......+.. ..... .......+.+.+|+
T Consensus       145 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~p~~~~~~p~dv  220 (250)
T 2fwm_X          145 AYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVS---DDAEEQRIRGFGEQFK-LGIPLGKIARPQEI  220 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------------CHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccC---hhHHHHHHhhhhhccc-ccCCCCCCcCHHHH
Confidence            8999999999987764       46788999999998753211000   0000000000 00000 00011236899999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      |++++.++.....  ...+..+++.+|..
T Consensus       221 A~~v~~l~s~~~~--~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          221 ANTILFLASDLAS--HITLQDIVVDGGST  247 (250)
T ss_dssp             HHHHHHHHSGGGT--TCCSCEEEESTTTT
T ss_pred             HHHHHHHhCcccc--CCCCCEEEECCCcc
Confidence            9999999876432  12355899988754

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.91  E-value=1.1e-23  Score=176.30  Aligned_cols=222  Identities=16%  Similarity=0.130  Sum_probs=154.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh-hhhhhhCCCcceEEEeeCCCcccHHHHHH----HhC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP-QLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFG   75 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~   75 (320)
                      |.+|++|||||+|+||++++++|+++|   ++|+++.|+.+.. .......+..+.++.+|++|++++.++++    .++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAG---ANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            567899999999999999999999999   8999999987511 11112223457788999999998877765    346


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHH----hhhhhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWL----SSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l----~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++|+|||+||.....    ....+++..+++|+.+++ ++.    ..+++.+..+||++||...+.+.          .+
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~  147 (255)
T 2q2v_A           79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVF-HGTRLALPGMRARNWGRIINIASVHGLVGS----------TG  147 (255)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCEEEEEECCGGGTSCC----------TT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCcEEEEEcCchhccCC----------CC
Confidence            899999999976432    123345678899999875 444    44456666799999999877532          23


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCCh---HHH---H----HHHHhcCCceEeecC
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLP---IQW---I----DSVLSKGEKVEFFHD  210 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~---~~~---~----~~~~~~~~~~~~~~~  210 (320)
                      ...|+.+|...+.+.+.+       +.++.++||+.++++...     ...   ...   .    .......       .
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-------~  215 (255)
T 2q2v_A          148 KAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ-----KQIDDRAANGGDPLQAQHDLLAEK-------Q  215 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH-----HHHHHHHHHTCCHHHHHHHHHTTT-------C
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh-----hhcccccccccchHHHHHHHHhcc-------C
Confidence            678999999999987764       245688999999886421     000   000   0    0000111       1


Q ss_pred             cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ....+++++|+|++++.++.....  ...+..|++.+|..
T Consensus       216 p~~~~~~~~dvA~~~~~l~s~~~~--~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          216 PSLAFVTPEHLGELVLFLCSEAGS--QVRGAAWNVDGGWL  253 (255)
T ss_dssp             TTCCCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHHHHhCCccC--CCCCCEEEECCCcc
Confidence            234589999999999999875422  12355899988743

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.91  E-value=7.9e-24  Score=180.22  Aligned_cols=221  Identities=17%  Similarity=0.154  Sum_probs=161.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---C-CcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---P-HSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      .+|+||||||+|+||++++++|+++|   ++|++++|+.+......+.+   + ..+.++.+|++|++++.++++    .
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  116 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAG---ANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA  116 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            36799999999999999999999999   89999999987765554433   2 467889999999998777664    4


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhh-cccCCCCcccCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVY-EGVKSFYKEEDE  144 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy-~~~~~~~~E~~~  144 (320)
                      ++++|+|||+||.....    .+.++++..+++|+.+++ ++++++    ++.+..+||++||...+ ..          
T Consensus       117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~g~iV~isS~~~~~~~----------  185 (293)
T 3rih_A          117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTV-YTVQACLAPLTASGRGRVILTSSITGPVTG----------  185 (293)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHH-HHHHHTHHHHHHHSSCEEEEECCSBTTTBB----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCCEEEEEeChhhccCC----------
Confidence            57899999999986442    233455678999999996 888777    45566799999998753 21          


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      ..+...|+.||...+.+.+.+       +.++.+++|+.|+++.....     ...+... +....++       ..+..
T Consensus       186 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-----~~~~~~~-~~~~~p~-------~r~~~  252 (293)
T 3rih_A          186 YPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM-----GEEYISG-MARSIPM-------GMLGS  252 (293)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT-----CHHHHHH-HHTTSTT-------SSCBC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc-----cHHHHHH-HHhcCCC-------CCCCC
Confidence            124678999999999977753       45678899999998643110     1122222 2223222       23568


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      .+|+|++++.++.....  ...+.++++.+|...
T Consensus       253 p~dvA~~v~fL~s~~a~--~itG~~i~vdGG~~~  284 (293)
T 3rih_A          253 PVDIGHLAAFLATDEAG--YITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHHHHHHHHHHHSGGGT--TCCSCEEEESTTTTC
T ss_pred             HHHHHHHHHHHhCcccc--CCCCCEEEECCCccC
Confidence            99999999999875432  123569999988654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.91  E-value=1.2e-23  Score=178.48  Aligned_cols=228  Identities=16%  Similarity=0.155  Sum_probs=159.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC------------hhh---hhhhCCCcceEEEeeCCCccc
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL------------PQL---LLDALPHSFVFFDVDLKSGSG   66 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~------------~~~---~~~~~~~~~~~~~~Dl~d~~~   66 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++.+|++..            ...   .....+..+.++.+|++|+++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   85 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAG---ADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA   85 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            36899999999999999999999999   899999997432            111   112234578889999999998


Q ss_pred             HHHHHHH----hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcc
Q 020880           67 FDAVALK----FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEG  134 (320)
Q Consensus        67 ~~~~~~~----~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~  134 (320)
                      +.++++.    ++++|++||+||.....    .+.++++..+++|+.+++ ++++++    ++.+..+||++||...+.+
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (281)
T 3s55_A           86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTF-NTIAAVAPGMIKRNYGRIVTVSSMLGHSA  164 (281)
T ss_dssp             HHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGGSC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCCEEEEECChhhcCC
Confidence            8777653    46899999999986532    233455778899999996 777775    3455569999999987753


Q ss_pred             cCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCC-----CC----CCChHHHHHHH
Q 020880          135 VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISP-----VP----KSLPIQWIDSV  198 (320)
Q Consensus       135 ~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~-----~~----~~~~~~~~~~~  198 (320)
                      .          .+...|+.+|...+.+.+.+       +.++.+++|+.|+++.....     ..    ..... .....
T Consensus       165 ~----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~  233 (281)
T 3s55_A          165 N----------FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLK-DVESV  233 (281)
T ss_dssp             C----------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHH-HHHHH
T ss_pred             C----------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchh-HHHHH
Confidence            2          24678999999999987764       34567899999998864210     00    00000 00000


Q ss_pred             HhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          199 LSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       199 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      .      .......+.+.+++|+|++++.++......  ..+.++++.+|...+
T Consensus       234 ~------~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~--itG~~i~vdgG~~~~  279 (281)
T 3s55_A          234 F------ASLHLQYAPFLKPEEVTRAVLFLVDEASSH--ITGTVLPIDAGATAR  279 (281)
T ss_dssp             H------HHHCSSSCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTTGGGG
T ss_pred             H------HhhhccCcCCCCHHHHHHHHHHHcCCcccC--CCCCEEEECCCcccC
Confidence            0      001112256899999999999998764321  235599999886554

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.91  E-value=1.4e-23  Score=177.68  Aligned_cols=219  Identities=16%  Similarity=0.159  Sum_probs=154.6

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC-CCCChhhhhhhC----CCcceEEEeeCCCc----ccHHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDAL----PHSFVFFDVDLKSG----SGFDAVA   71 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r-~~~~~~~~~~~~----~~~~~~~~~Dl~d~----~~~~~~~   71 (320)
                      |++|++|||||+|+||++++++|+++|   ++|++++| +.+....+.+.+    +..+.++.+|++|.    +++.+++
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   85 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQG---FRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDII   85 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHH
Confidence            345789999999999999999999999   89999999 655444433322    45678899999999    8777666


Q ss_pred             H----HhCCCCEEEECCCccCccc----cc-----------cCchhhhhccccccHHHHHhhhhh---ccC------ceE
Q 020880           72 L----KFGQPDVVVNCAALSVPRV----CE-----------NDPDSAMSINVPSSLVNWLSSFTE---NKE------NLL  123 (320)
Q Consensus        72 ~----~~~~~d~Vih~a~~~~~~~----~~-----------~~~~~~~~~n~~~~~~~~l~~~~~---~~~------~~~  123 (320)
                      +    .++++|+|||+||......    ..           .+++..+++|+.+++ ++++++..   .+.      .+|
T Consensus        86 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~~~~~g~i  164 (276)
T 1mxh_A           86 DCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPL-FLIRAFARRQGEGGAWRSRNLSV  164 (276)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHH-HHHHHHHHTC-------CCCEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHH-HHHHHHHHHHhcCCCCCCCCcEE
Confidence            4    3468999999999764321    11           344578899999996 88887765   333      699


Q ss_pred             EEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHH
Q 020880          124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWID  196 (320)
Q Consensus       124 v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  196 (320)
                      |++||...+.+.          .+...|+.+|...+.+.+.+       +.++.+++|+.+.++ ..  .    ......
T Consensus       165 v~isS~~~~~~~----------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~--~----~~~~~~  227 (276)
T 1mxh_A          165 VNLCDAMTDLPL----------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PA--M----PQETQE  227 (276)
T ss_dssp             EEECCGGGGSCC----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SS--S----CHHHHH
T ss_pred             EEECchhhcCCC----------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-cc--C----CHHHHH
Confidence            999999887532          24678999999999877654       346788999999998 21  1    112222


Q ss_pred             HHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          197 SVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ... ...++      .+++.+++|+|++++.++.....  ...+.++++.+|.
T Consensus       228 ~~~-~~~p~------~r~~~~~~dva~~v~~l~s~~~~--~~tG~~~~vdgG~  271 (276)
T 1mxh_A          228 EYR-RKVPL------GQSEASAAQIADAIAFLVSKDAG--YITGTTLKVDGGL  271 (276)
T ss_dssp             HHH-TTCTT------TSCCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTG
T ss_pred             HHH-hcCCC------CCCCCCHHHHHHHHHHHhCcccc--CccCcEEEECCch
Confidence            222 22111      12378999999999999875322  1235589998874

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.91  E-value=4.6e-24  Score=179.20  Aligned_cols=222  Identities=14%  Similarity=0.090  Sum_probs=154.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC-CCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r-~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      .+|+||||||+|+||++++++|+++|   ++|+++.| +.+....+.+.   .+..+.++.+|++|++++.++++.    
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEK---AKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            35799999999999999999999999   89999999 54433333222   245677899999999988776653    


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hcc-CceEEEeechhhhcccCCCCcccCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENK-ENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      ++++|+|||+||.....    .+..+++..+++|+.+++ ++++++.    +.+ ..+||++||...+.+          
T Consensus        83 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~~~~~iv~isS~~~~~~----------  151 (261)
T 1gee_A           83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAF-LGSREAIKYFVENDIKGTVINMSSVHEKIP----------  151 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCCCEEEEECCGGGTSC----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHH-HHHHHHHHHHHhCCCCCEEEEeCCHHhcCC----------
Confidence            45899999999976432    122345678899999985 6666654    334 569999999876542          


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      ..+...|+.+|...+.+.+.+       +.++.++||+.++++.......   ....... +....+       ...+++
T Consensus       152 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~-~~~~~~-------~~~~~~  220 (261)
T 1gee_A          152 WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA---DPEQRAD-VESMIP-------MGYIGE  220 (261)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH---SHHHHHH-HHTTCT-------TSSCBC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhccc---ChhHHHH-HHhcCC-------CCCCcC
Confidence            235679999999998877653       4567899999999875310000   0011111 111111       235789


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ++|+|++++.++.....  ...+.++++.+|..
T Consensus       221 ~~dva~~~~~l~~~~~~--~~~G~~~~v~gg~~  251 (261)
T 1gee_A          221 PEEIAAVAAWLASSEAS--YVTGITLFADGGMT  251 (261)
T ss_dssp             HHHHHHHHHHHHSGGGT--TCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhCcccc--CCCCcEEEEcCCcc
Confidence            99999999999875321  12355899988754

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.91  E-value=1.7e-23  Score=176.31  Aligned_cols=218  Identities=15%  Similarity=0.116  Sum_probs=156.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-Chhhhh---hhCCCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-LPQLLL---DALPHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      +|++|||||+|+||++++++|+++|   ++|++..|+.. ......   ...+..+.++.+|++|+++++++++    .+
T Consensus        28 ~k~vlVTGas~gIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~  104 (269)
T 4dmm_A           28 DRIALVTGASRGIGRAIALELAAAG---AKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW  104 (269)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999   88988888533 232222   2234567889999999998877665    34


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|+|||+||.....    .+.++++..+++|+.+++ ++++++    .+.+..+||++||...+...          .
T Consensus       105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  173 (269)
T 4dmm_A          105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVF-LCSRAAAKIMLKQRSGRIINIASVVGEMGN----------P  173 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEECCHHHHHCC----------T
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCcEEEEECchhhcCCC----------C
Confidence            6899999999986542    223455678999999986 777766    34455699999998876432          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+.+.+       +.++.+++|+.|..+...         ...........+       ...+.+.+
T Consensus       174 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~---------~~~~~~~~~~~p-------~~r~~~~~  237 (269)
T 4dmm_A          174 GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS---------ELAAEKLLEVIP-------LGRYGEAA  237 (269)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC---------HHHHHHHGGGCT-------TSSCBCHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc---------cccHHHHHhcCC-------CCCCCCHH
Confidence            3678999999888876653       356788999999876431         111111212222       23478899


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      |+|++++.++..+... -..+.++++.+|..+
T Consensus       238 dvA~~v~~l~s~~~~~-~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          238 EVAGVVRFLAADPAAA-YITGQVINIDGGLVM  268 (269)
T ss_dssp             HHHHHHHHHHHCGGGG-GCCSCEEEESTTSCC
T ss_pred             HHHHHHHHHhCCcccC-CCcCCEEEECCCeec
Confidence            9999999999863221 123559999988654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.91  E-value=1.7e-23  Score=175.24  Aligned_cols=215  Identities=13%  Similarity=0.071  Sum_probs=152.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~d   78 (320)
                      +|++|||||+|+||++++++|+++|   ++|++++|+.++........  .+.++.+|++|++++.++++.    ++++|
T Consensus        27 ~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD  101 (260)
T 3gem_A           27 SAPILITGASQRVGLHCALRLLEHG---HRVIISYRTEHASVTELRQA--GAVALYGDFSCETGIMAFIDLLKTQTSSLR  101 (260)
T ss_dssp             CCCEEESSTTSHHHHHHHHHHHHTT---CCEEEEESSCCHHHHHHHHH--TCEEEECCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHhc--CCeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            5799999999999999999999999   88999999987654443332  367899999999988777754    36899


Q ss_pred             EEEECCCccCcccc---ccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcchH
Q 020880           79 VVVNCAALSVPRVC---ENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVY  151 (320)
Q Consensus        79 ~Vih~a~~~~~~~~---~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y  151 (320)
                      +|||+||.......   ..+++..+++|+.+++ ++++++.    +.+..+||++||...+.+.          .+...|
T Consensus       102 ~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~~Y  170 (260)
T 3gem_A          102 AVVHNASEWLAETPGEEADNFTRMFSVHMLAPY-LINLHCEPLLTASEVADIVHISDDVTRKGS----------SKHIAY  170 (260)
T ss_dssp             EEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHH-HHHHHHHHHHHTSSSCEEEEECCGGGGTCC----------SSCHHH
T ss_pred             EEEECCCccCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCcEEEEECChhhcCCC----------CCcHhH
Confidence            99999997644322   2334578899999986 7766663    4455699999998876532          246789


Q ss_pred             HHHHHHHHHHHHHHc------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHH
Q 020880          152 GKSKVAAEKFIYEKC------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII  225 (320)
Q Consensus       152 ~~sK~~~e~~~~~~~------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  225 (320)
                      +.+|...+.+.+.+.      .++.+++|+.+..+....   .    .+... .....++       ..+..++|+|+++
T Consensus       171 ~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~---~----~~~~~-~~~~~p~-------~r~~~~edva~~v  235 (260)
T 3gem_A          171 CATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD---A----AYRAN-ALAKSAL-------GIEPGAEVIYQSL  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-----------------------CCS-------CCCCCTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC---H----HHHHH-HHhcCCC-------CCCCCHHHHHHHH
Confidence            999999999777642      345779999997664210   0    11111 1111121       2356799999999


Q ss_pred             HHHHhhhhccccccCceeEecCCCCcC
Q 020880          226 LALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      +.+++...    ..+.++++.+|..++
T Consensus       236 ~~L~~~~~----itG~~i~vdGG~~~~  258 (260)
T 3gem_A          236 RYLLDSTY----VTGTTLTVNGGRHVK  258 (260)
T ss_dssp             HHHHHCSS----CCSCEEEESTTTTTC
T ss_pred             HHHhhCCC----CCCCEEEECCCcccC
Confidence            99985432    235599999987654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.91  E-value=7.7e-24  Score=177.69  Aligned_cols=226  Identities=13%  Similarity=0.116  Sum_probs=153.9

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhhhC----CCcceEEEeeCCCcccHHHHHHH--
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLDAL----PHSFVFFDVDLKSGSGFDAVALK--   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~--   73 (320)
                      |++|++|||||+|+||++++++|+++|   ++|+++.|+++. .....+.+    +..+.++.+|++|++++.++++.  
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   78 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQG---ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAV   78 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcC---CEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999   899999998765 44433322    34677889999999988777653  


Q ss_pred             --hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccC
Q 020880           74 --FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        74 --~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                        ++++|+|||+||.....    ....+++..+++|+.+++ ++++++.    +.+..+||++||...+.+.        
T Consensus        79 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  149 (260)
T 1x1t_A           79 RQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVF-HGTAAALPHMKKQGFGRIINIASAHGLVAS--------  149 (260)
T ss_dssp             HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCEEEEECcHHhCcCC--------
Confidence              46899999999976432    123345678899999986 7666663    4455699999999876532        


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCCh------HHHHHHHHhcCCceEeecC
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHD  210 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~  210 (320)
                        .+...|+.+|...+.+.+.+       +.++.+++|+.+.++...........      ..........       ..
T Consensus       150 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~  220 (260)
T 1x1t_A          150 --ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSE-------KQ  220 (260)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHH-------HC
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhc-------cC
Confidence              24678999999999977754       34577899999988753211000000      0000000000       01


Q ss_pred             cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ....+.+.+|+|++++.++.....  ...+.++++.+|.
T Consensus       221 p~~~~~~p~dva~~~~~l~s~~~~--~~tG~~~~vdgG~  257 (260)
T 1x1t_A          221 PSLQFVTPEQLGGTAVFLASDAAA--QITGTTVSVDGGW  257 (260)
T ss_dssp             TTCCCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTG
T ss_pred             CCCCCcCHHHHHHHHHHHhChhhc--CCCCCEEEECCCc
Confidence            123578999999999999875321  1235589998874

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.91  E-value=9.3e-24  Score=176.82  Aligned_cols=223  Identities=18%  Similarity=0.137  Sum_probs=157.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEe-cCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      ++|++|||||+|+||++++++|+++|   ++|++. .|+.+......+   ..+..+.++.+|++|+++++++++.    
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G---~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENG---YNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCC---CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999   888886 777655444333   2345788899999999998877754    


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++++|+|||+||.....    .+..+++..+++|+.+++ ++++++    ++.+..+||++||...+...          
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------  148 (258)
T 3oid_A           80 FGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALL-FCAQEAAKLMEKNGGGHIVSISSLGSIRYL----------  148 (258)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHTTTCEEEEEEEEGGGTSBC----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCcEEEEECchhhCCCC----------
Confidence            46899999999975432    223345677899999986 777766    44555699999999876432          


Q ss_pred             CCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.||...+.+.+.+.       .++.+++|+.+..+.......   ......... ...+       ...+.++
T Consensus       149 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~-~~~p-------~~r~~~~  217 (258)
T 3oid_A          149 ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN---REDLLEDAR-QNTP-------AGRMVEI  217 (258)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT---HHHHHHHHH-HHCT-------TSSCBCH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc---CHHHHHHHH-hcCC-------CCCCcCH
Confidence            346799999999999887642       356789999998764321110   111121111 1111       2347899


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      +|+|++++.++.....  -..+.++++.+|...
T Consensus       218 ~dva~~v~~L~s~~~~--~itG~~i~vdGG~~~  248 (258)
T 3oid_A          218 KDMVDTVEFLVSSKAD--MIRGQTIIVDGGRSL  248 (258)
T ss_dssp             HHHHHHHHHHTSSTTT--TCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhCcccC--CccCCEEEECCCccC
Confidence            9999999999876432  123569999988543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.91  E-value=9.3e-24  Score=178.74  Aligned_cols=224  Identities=15%  Similarity=0.101  Sum_probs=155.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      ++|++|||||+|+||++++++|+++|   ++|+++.|+++......+.   .+..+.++.+|++|++++.++++    .+
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEG---LRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY   97 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            35799999999999999999999999   8999999987654433332   24567889999999998877665    34


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc------cCceEEEeechhhhcccCCCCcccCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN------KENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~------~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      +++|+|||+||.....    ....+++..+++|+.+++ ++++++...      +..+||++||...+.+.         
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------  167 (277)
T 2rhc_B           98 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVF-RVTKQVLKAGGMLERGTGRIVNIASTGGKQGV---------  167 (277)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHhChhhHhhcCCeEEEEECccccccCC---------
Confidence            6899999999976432    122345678899999986 777776543      55699999998765422         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCC---C---CChHHHHHHHHhcCCceEeecCc
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVP---K---SLPIQWIDSVLSKGEKVEFFHDE  211 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~  211 (320)
                       .+...|+.+|...+.+.+.+       +.++.++||+.+.++.......   .   ......... +...       ..
T Consensus       168 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~p  238 (277)
T 2rhc_B          168 -VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDR-ITAR-------VP  238 (277)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHH-HHHH-------ST
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHH-HHhc-------CC
Confidence             24678999999999987764       3456889999998763210000   0   000000000 1000       12


Q ss_pred             ccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          212 CRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       212 ~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ...+++++|+|++++.++..+..  ...+.++++.+|.
T Consensus       239 ~~r~~~~~dvA~~v~~l~s~~~~--~~tG~~~~vdGG~  274 (277)
T 2rhc_B          239 IGRYVQPSEVAEMVAYLIGPGAA--AVTAQALNVCGGL  274 (277)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTC
T ss_pred             CCCCcCHHHHHHHHHHHhCchhc--CCCCcEEEECCCc
Confidence            34589999999999999876432  1235589998874

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.91  E-value=2.3e-23  Score=173.42  Aligned_cols=218  Identities=18%  Similarity=0.143  Sum_probs=159.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~d   78 (320)
                      +|++|||||+|+||++++++|+++|   ++|++..|+++..+...+.+.....++.+|++|+++++++++    .++++|
T Consensus         9 gk~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   85 (248)
T 3op4_A            9 GKVALVTGASRGIGKAIAELLAERG---AKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVD   85 (248)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            5799999999999999999999999   899999998776666555545567789999999998877765    346899


Q ss_pred             EEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           79 VVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        79 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      ++||+||.....    .+.++++..+++|+.+++ ++++++.    +.+..+||++||...+.+.          .+...
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~~  154 (248)
T 3op4_A           86 ILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIF-RLSKAVLRGMMKKRQGRIINVGSVVGTMGN----------AGQAN  154 (248)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------TTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCCEEEEEcchhhcCCC----------CCChH
Confidence            999999986542    233456778999999986 7777764    3455699999998876432          24678


Q ss_pred             HHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHH
Q 020880          151 YGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK  223 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  223 (320)
                      |+.+|...+.+.+.+       +.++.+++|+.+..+-...     .......... ...+       ...+.+++|+|+
T Consensus       155 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-----~~~~~~~~~~-~~~p-------~~r~~~p~dva~  221 (248)
T 3op4_A          155 YAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA-----LNDEQRTATL-AQVP-------AGRLGDPREIAS  221 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTT-----SCHHHHHHHH-HTCT-------TCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhh-----cCHHHHHHHH-hcCC-------CCCCcCHHHHHH
Confidence            999999988877654       3456789999997664321     1111221111 1222       234789999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCCC
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +++.++.....  ...+.++++.+|.
T Consensus       222 ~v~~L~s~~~~--~itG~~i~vdgG~  245 (248)
T 3op4_A          222 AVAFLASPEAA--YITGETLHVNGGM  245 (248)
T ss_dssp             HHHHHHSGGGT--TCCSCEEEESTTS
T ss_pred             HHHHHcCCccC--CccCcEEEECCCe
Confidence            99999875432  1235599998874

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.91  E-value=1.1e-23  Score=176.74  Aligned_cols=221  Identities=17%  Similarity=0.160  Sum_probs=159.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---C-CcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---P-HSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++.+|+.++.+...+.+   + ..+.++.+|++|+++++++++    .
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAG---ANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999   89999999876655443322   2 467889999999998877664    4


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhh-cccCCCCcccCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVY-EGVKSFYKEEDE  144 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy-~~~~~~~~E~~~  144 (320)
                      ++++|++||+||.....    .+.++++..+++|+.+++ ++++++..    .+..++|++||.... ..          
T Consensus        86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------  154 (262)
T 3pk0_A           86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTF-YAVQACLDALIASGSGRVVLTSSITGPITG----------  154 (262)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHSSCEEEEECCSBTTTBC----------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCcEEEEEechhhccCC----------
Confidence            46899999999976432    223345677899999986 77766654    366799999998753 21          


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      ..+...|+.+|...+.+.+.+       +.++.+++|+.|.++.....     ...+..... ...+.       ..+.+
T Consensus       155 ~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-----~~~~~~~~~-~~~p~-------~r~~~  221 (262)
T 3pk0_A          155 YPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN-----GEEYIASMA-RSIPA-------GALGT  221 (262)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT-----CHHHHHHHH-TTSTT-------SSCBC
T ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc-----CHHHHHHHH-hcCCC-------CCCcC
Confidence            224678999999999987764       45678899999988643111     112222222 22222       23688


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      .+|+|++++.++.....  ...+.++++.+|...
T Consensus       222 p~dva~~v~~L~s~~~~--~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          222 PEDIGHLAAFLATKEAG--YITGQAIAVDGGQVL  253 (262)
T ss_dssp             HHHHHHHHHHHHSGGGT--TCCSCEEEESTTTTC
T ss_pred             HHHHHHHHHHHhCcccc--CCcCCEEEECCCeec
Confidence            99999999999876432  123559999988654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.91  E-value=1e-23  Score=175.34  Aligned_cols=219  Identities=15%  Similarity=0.129  Sum_probs=154.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEe-cCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      +|+||||||+|+||++++++|+++|   ++|+++ .|+++....+.+.   .+..+.++.+|++|++++.++++.    +
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G---~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAG---CKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW   77 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999   888884 7775544433222   235677899999999988877753    4


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|+|||+||.....    .+..+++..+++|+.+++ ++++++.+    .+..+||++||...+.+.          .
T Consensus        78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~  146 (244)
T 1edo_A           78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVF-LCTQAATKIMMKKRKGRIINIASVVGLIGN----------I  146 (244)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------T
T ss_pred             CCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHH-HHHHHHHHHHHhcCCCEEEEECChhhcCCC----------C
Confidence            5799999999976532    222345678899999986 77777654    456799999998765322          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+.+.+       +.++.++||+.++++....     ........ .....+       ...+++++
T Consensus       147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----~~~~~~~~-~~~~~~-------~~~~~~~~  213 (244)
T 1edo_A          147 GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-----LGEDMEKK-ILGTIP-------LGRTGQPE  213 (244)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-----TCHHHHHH-HHTSCT-------TCSCBCHH
T ss_pred             CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh-----cChHHHHH-HhhcCC-------CCCCCCHH
Confidence            3668999999998877654       3467889999998864311     11112221 112211       23478999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+|++++.++..+... ...+.+|++.+|.
T Consensus       214 dva~~~~~l~~~~~~~-~~~G~~~~v~gG~  242 (244)
T 1edo_A          214 NVAGLVEFLALSPAAS-YITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHHHHHHHHCSGGG-GCCSCEEEESTTT
T ss_pred             HHHHHHHHHhCCCccC-CcCCCEEEeCCCc
Confidence            9999999998543221 1235589998874

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.91  E-value=1.5e-23  Score=177.24  Aligned_cols=226  Identities=15%  Similarity=0.084  Sum_probs=160.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++.+|+.+........++..+.++.+|++|++++.++++    .++++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEG---CHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGV  104 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            35799999999999999999999999   899999998777666666556678889999999998877665    34689


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||.....    .+.++++..+++|+.+++ ++++++.    +.+..+||++||...+.+.          .+..
T Consensus       105 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~----------~~~~  173 (277)
T 3gvc_A          105 DKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAW-LCTKHAAPRMIERGGGAIVNLSSLAGQVAV----------GGTG  173 (277)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHTTCEEEEEECCGGGTSCC----------TTBH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCcEEEEEcchhhccCC----------CCch
Confidence            9999999986542    233456778999999986 7766664    3455689999998876432          2467


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCC---CCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISP---VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      .|+.+|...+.+.+.+       +.++.+++|+.|.++.....   ..............         ......+.+.+
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~r~~~pe  244 (277)
T 3gvc_A          174 AYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMI---------ARLQGRMAAPE  244 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHH---------HHHHSSCBCHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhh---------hccccCCCCHH
Confidence            8999999999987753       34678899999987632100   00000000000000         00123478899


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      |+|++++.++.....  ...+.++++.+|...+
T Consensus       245 dvA~~v~~L~s~~a~--~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          245 EMAGIVVFLLSDDAS--MITGTTQIADGGTIAA  275 (277)
T ss_dssp             HHHHHHHHHHSGGGT--TCCSCEEEESTTGGGS
T ss_pred             HHHHHHHHHcCCccC--CccCcEEEECCcchhc
Confidence            999999999876432  1235599999876543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=2.4e-24  Score=181.56  Aligned_cols=228  Identities=16%  Similarity=0.136  Sum_probs=155.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHH----
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      +|++|||||+|+||++++++|+++|   ++|++++|+.++.....+.+     +..+.++.+|++|++++.++++.    
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            7 GKVALVTGAAQGIGRAFAEALLLKG---AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            4699999999999999999999999   89999999865543322221     23577899999999988877654    


Q ss_pred             hCCCCEEEECCCccCccccccCchhhhhccccccH---HHHHhhhhhcc---CceEEEeechhhhcccCCCCcccCCCCC
Q 020880           74 FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSL---VNWLSSFTENK---ENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++++|+|||+||...    ..+++..+++|+.+++   ..+++.+++.+   ..+||++||...+.+.          .+
T Consensus        84 ~g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~  149 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV----------AQ  149 (267)
T ss_dssp             HSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC----------TT
T ss_pred             cCCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC----------CC
Confidence            467999999999753    3467888999998764   24555555543   4699999999887542          23


Q ss_pred             cchHHHHHHHHHHHHHHH---------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          148 VNVYGKSKVAAEKFIYEK---------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~---------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      ...|+.+|...+.+.+.+         +.++.+++|+.+.++.......    .............+. .......++++
T Consensus       150 ~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~  224 (267)
T 2gdz_A          150 QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEK----EENMGQYIEYKDHIK-DMIKYYGILDP  224 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGC----HHHHGGGGGGHHHHH-HHHHHHCCBCH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhcccc----ccccchhhhHHHHHH-HHhccccCCCH
Confidence            568999999999877652         3467889999997653110000    000000000000000 00012347899


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHH
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQM  256 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~  256 (320)
                      +|+|++++.++....    ..+.++++.+++.+++.|+
T Consensus       225 ~dvA~~v~~l~s~~~----~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          225 PLIANGLITLIEDDA----LNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             HHHHHHHHHHHHCTT----CSSCEEEEETTTEEEECCC
T ss_pred             HHHHHHHHHHhcCcC----CCCcEEEecCCCcccccCc
Confidence            999999999998643    2355999999887766553

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.91  E-value=2.1e-23  Score=176.80  Aligned_cols=232  Identities=13%  Similarity=0.105  Sum_probs=160.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC------------Chhhhh---hhCCCcceEEEeeCCCccc
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP------------LPQLLL---DALPHSFVFFDVDLKSGSG   66 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~------------~~~~~~---~~~~~~~~~~~~Dl~d~~~   66 (320)
                      .+|++|||||+|+||.+++++|+++|   ++|+++.|+..            ......   ...+..+.++.+|++|+++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   88 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADG---ADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES   88 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            46899999999999999999999999   88999888732            111111   1224578889999999998


Q ss_pred             HHHHHH----HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhh----cc-CceEEEeechhhhcccCC
Q 020880           67 FDAVAL----KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE----NK-ENLLIHLSTDQVYEGVKS  137 (320)
Q Consensus        67 ~~~~~~----~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~-~~~~v~~Ss~~vy~~~~~  137 (320)
                      +.++++    .++++|++||+||.........+++..+++|+.+++ ++++++..    .+ ..+||++||...+.....
T Consensus        89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  167 (278)
T 3sx2_A           89 LSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVY-HTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS  167 (278)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc
Confidence            877765    346899999999987654445567889999999996 77777643    22 358999999887643211


Q ss_pred             CCcccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC
Q 020880          138 FYKEEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD  210 (320)
Q Consensus       138 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (320)
                            +..+...|+.+|...+.+.+.+.       .++.+++|+.|.++...    ......++.............+.
T Consensus       168 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~----~~~~~~~~~~~~~~~~~~~~~~~  237 (278)
T 3sx2_A          168 ------ADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMIN----NEFTREWLAKMAAATDTPGAMGN  237 (278)
T ss_dssp             ------SSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS----SHHHHHHHHHHHHHCC--CTTSC
T ss_pred             ------CCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccch----hhhHHHHHhhccchhhhhhhhhh
Confidence                  11235689999999999877642       46678999999887532    11111222222211111111121


Q ss_pred             -cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          211 -ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       211 -~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                       ....+++++|+|+++++++.....  ...+.++++.+|.
T Consensus       238 ~~p~~~~~p~dvA~~v~~l~s~~~~--~itG~~i~vdGG~  275 (278)
T 3sx2_A          238 AMPVEVLAPEDVANAVAWLVSDQAR--YITGVTLPVDAGF  275 (278)
T ss_dssp             SSSCSSBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTTT
T ss_pred             hcCcCcCCHHHHHHHHHHHhCcccc--cccCCEEeECCCc
Confidence             125689999999999999876432  1235599998874

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.91  E-value=2.5e-23  Score=176.49  Aligned_cols=223  Identities=14%  Similarity=0.039  Sum_probs=158.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      ++|+||||||+|+||++++++|+++|   ++|+++.|+.+......+.   .+..+.++.+|++|++++.++++.    +
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAG---ADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHT---CEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            46799999999999999999999999   8999999987765443322   245678899999999988877754    3


Q ss_pred             CCCCEEEECCCccCc------cccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVP------RVCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +++|+|||+||....      .....+++..+++|+.+++   ..+++.+++.+.++||++||...+...        +.
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------~~  181 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN--------IP  181 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-----------
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC--------CC
Confidence            579999999997644      2222345678899999953   366777777777799999998865431        12


Q ss_pred             CCcchHHHHHHHHHHHHHHHcC------CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          146 APVNVYGKSKVAAEKFIYEKCS------NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~~------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      .+...|+.+|...|.+++.+..      ++.+++|+.+..+-...     .......... ...+       ...+++++
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~v~~v~Pg~v~t~~~~~-----~~~~~~~~~~-~~~p-------~~~~~~~~  248 (279)
T 3ctm_A          182 QLQAPYNTAKAACTHLAKSLAIEWAPFARVNTISPGYIDTDITDF-----ASKDMKAKWW-QLTP-------LGREGLTQ  248 (279)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECSBSSTTTSS-----CCHHHHHHHH-HHST-------TCSCBCGG
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcccCCEEEEeccCCccccccc-----cChHHHHHHH-HhCC-------ccCCcCHH
Confidence            3467899999999998876421      66889999998764311     1111111111 1111       22478999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      |+|++++.++.....  ...+.++++.+|..
T Consensus       249 dvA~~~~~l~s~~~~--~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          249 ELVGGYLYLASNAST--FTTGSDVVIDGGYT  277 (279)
T ss_dssp             GTHHHHHHHHSGGGT--TCCSCEEEESTTCC
T ss_pred             HHHHHHHHHhCcccc--CccCCEEEECCCee
Confidence            999999999876422  12355899988753

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.91  E-value=4.5e-23  Score=175.32  Aligned_cols=219  Identities=16%  Similarity=0.126  Sum_probs=153.6

Q ss_pred             CcEEEEEcCC--ChhhHHHHHHHhhccCCCceEEEecCCCC---ChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----
Q 020880            3 KKRVLVVGGT--GYLGQHLLQGLSEIEGKPYDVAATHHSTP---LPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         3 ~~~ilItGat--G~IG~~l~~~L~~~g~~v~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      +|++|||||+  |+||+++++.|+++|   ++|++++|+.+   ....+....+ .+.++.+|++|++++.++++.    
T Consensus        21 ~k~vlVTGas~~~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           21 GKRALITGVANERSIAYGIAKSFHREG---AQLAFTYATPKLEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999  999999999999999   89999999864   1222222222 367899999999988777653    


Q ss_pred             hCCCCEEEECCCccCc--------cccccCchhhhhccccccHHHHHhhhhhcc---CceEEEeechhhhcccCCCCccc
Q 020880           74 FGQPDVVVNCAALSVP--------RVCENDPDSAMSINVPSSLVNWLSSFTENK---ENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                      ++++|+|||+||....        ..+..+++..+++|+.+++ ++++++...-   ..+||++||...+.+.       
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~g~iv~isS~~~~~~~-------  168 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLI-ALTRELLPLMEGRNGAIVTLSYYGAEKVV-------  168 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHGGGGTTSCCEEEEEECGGGTSBC-------
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCEEEEEccchhccCC-------
Confidence            4689999999997643        1223345678999999996 8888776542   2599999998776432       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                         .+...|+.+|...+.+.+.+       +.++.+++|+.|.++..... .  ........ +....++       ..+
T Consensus       169 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~--~~~~~~~~-~~~~~p~-------~~~  234 (285)
T 2p91_A          169 ---PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI-T--GFHLLMEH-TTKVNPF-------GKP  234 (285)
T ss_dssp             ---TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C-T--THHHHHHH-HHHHSTT-------SSC
T ss_pred             ---CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc-c--chHHHHHH-HHhcCCC-------CCC
Confidence               23568999999999977654       45678999999998754211 0  11112221 1111121       236


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .+++|+|++++.++.....  ...+.+|++.+|.
T Consensus       235 ~~~~dva~~~~~l~s~~~~--~~tG~~~~vdgg~  266 (285)
T 2p91_A          235 ITIEDVGDTAVFLCSDWAR--AITGEVVHVDNGY  266 (285)
T ss_dssp             CCHHHHHHHHHHHTSGGGT--TCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHcCCccc--CCCCCEEEECCCc
Confidence            7899999999999865322  1235589998874

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.91  E-value=2.1e-23  Score=173.41  Aligned_cols=210  Identities=10%  Similarity=0.092  Sum_probs=153.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-------eEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-------DVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-------~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      +|+||||||+|+||++++++|+++|   +       +|++..|+.+....+...+   +..+.++.+|++|++++.++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G---~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   78 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAA---RHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTT   78 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHT---TTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhc---CcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHH
Confidence            5789999999999999999999999   6       8999999865554443322   4567889999999998887775


Q ss_pred             H----hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCc
Q 020880           73 K----FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYK  140 (320)
Q Consensus        73 ~----~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~  140 (320)
                      .    ++++|+|||+||.....    ....+++..+++|+.+++ ++++++.    +.+..+||++||...+.+.     
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----  152 (244)
T 2bd0_A           79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF-FLTQALFALMERQHSGHIFFITSVAATKAF-----  152 (244)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----
T ss_pred             HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhCCCCEEEEEecchhcCCC-----
Confidence            4    45799999999976432    123345678899999986 7777764    3456699999999887532     


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCccc
Q 020880          141 EEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       141 E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                           .+...|+.+|...|.+++.+       +.++.++||+.++++..... ..             ..        ..
T Consensus       153 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~-------------~~--------~~  205 (244)
T 2bd0_A          153 -----RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-DD-------------EM--------QA  205 (244)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-CS-------------TT--------GG
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc-cc-------------cc--------cc
Confidence                 24678999999999987543       34678899999999854211 00             00        12


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      .+++++|+|++++.++..+...  ..+.++...+++.
T Consensus       206 ~~~~~~dva~~~~~l~~~~~~~--~~g~~~~~~~~~~  240 (244)
T 2bd0_A          206 LMMMPEDIAAPVVQAYLQPSRT--VVEEIILRPTSGD  240 (244)
T ss_dssp             GSBCHHHHHHHHHHHHTSCTTE--EEEEEEEEETTCC
T ss_pred             cCCCHHHHHHHHHHHHhCCccc--cchheEEeccccc
Confidence            4789999999999999764321  1233555555443

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.91  E-value=9.1e-24  Score=177.94  Aligned_cols=229  Identities=14%  Similarity=0.148  Sum_probs=157.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHH---
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVAL---   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~---   72 (320)
                      |++|++|||||+|+||++++++|+++|   ++|++++|+.++.....+.+     +..+.++.+|++|++++.++++   
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   87 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEG---AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   87 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            346899999999999999999999999   89999999876544433222     3467889999999998877765   


Q ss_pred             -HhCCCCEEEECCCccCc-c----ccccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccC
Q 020880           73 -KFGQPDVVVNCAALSVP-R----VCENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        73 -~~~~~d~Vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                       .++++|+|||+||.... .    ....+++..+++|+.+++   ..++..+++.+..+||++||...+.+.        
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  159 (267)
T 1iy8_A           88 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI--------  159 (267)
T ss_dssp             HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC--------
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC--------
Confidence             34689999999997643 1    122345678899999875   134444455566799999999876432        


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCC--C-CCCChHHHHHHHHhcCCceEeecCccc
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISP--V-PKSLPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                        .+...|+.+|...+.+.+.+       +.++.+++|+.+.++.....  . ........... +....+       ..
T Consensus       160 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~p-------~~  229 (267)
T 1iy8_A          160 --GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEE-FIQVNP-------SK  229 (267)
T ss_dssp             --SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHH-HHTTCT-------TC
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHH-HhccCC-------CC
Confidence              24678999999999877653       45788999999987531100  0 00011000001 111111       23


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      .+.+.+|+|++++.++.....  ...+.++++.+|...+
T Consensus       230 r~~~~~dvA~~v~~l~s~~~~--~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          230 RYGEAPEIAAVVAFLLSDDAS--YVNATVVPIDGGQSAA  266 (267)
T ss_dssp             SCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTTTTTB
T ss_pred             CCcCHHHHHHHHHHHcCcccc--CCCCCEEEECCCcccC
Confidence            478999999999999865421  1235589998876543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.91  E-value=1.7e-23  Score=175.60  Aligned_cols=224  Identities=11%  Similarity=0.039  Sum_probs=152.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHHh---
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      +|++|||||+|+||++++++|+++|   ++|++++|++++.....+.+     +..+.++.+|++|++++.++++.+   
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            7 GKLAVVTAGSSGLGFASALELARNG---ARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            5799999999999999999999999   89999999865544433322     226788999999999888777643   


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      .++|+|||+||.....    ....+++..+++|+.+++ ++.+++    ++.+..+||++||...+.+.          .
T Consensus        84 ~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  152 (260)
T 2z1n_A           84 GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAV-WVGRRAAEQMVEKGWGRMVYIGSVTLLRPW----------Q  152 (260)
T ss_dssp             TCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------T
T ss_pred             cCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCcEEEEECchhhcCCC----------C
Confidence            1399999999975432    123345678899999985 555544    45566799999999887532          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCC-----CChHHHHHHHHhcCCceEeecCcccC
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPK-----SLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                      +...|+.+|...+.+.+.+       +.++.++||+.++++........     ..........+...       .....
T Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~p~~r  225 (260)
T 2z1n_A          153 DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASR-------IPMGR  225 (260)
T ss_dssp             TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------C-------CTTSS
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhc-------CCCCC
Confidence            3678999999999877654       34678899999998753210000     00000000000000       11234


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +.+.+|+|++++.++.....  ...+.++++.+|.
T Consensus       226 ~~~~~dva~~v~~l~s~~~~--~~tG~~i~vdGG~  258 (260)
T 2z1n_A          226 VGKPEELASVVAFLASEKAS--FITGAVIPVDGGA  258 (260)
T ss_dssp             CCCHHHHHHHHHHHTSGGGT--TCCSCEEEESTTT
T ss_pred             ccCHHHHHHHHHHHhCcccc--CCCCCEEEeCCCc
Confidence            78999999999999876432  1235589998763

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.91  E-value=3.6e-24  Score=179.01  Aligned_cols=219  Identities=20%  Similarity=0.201  Sum_probs=132.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      ++|++|||||+|+||++++++|+++|   ++|++.+|+.+....+.+.   .+..+.++.+|++|++++.++++.    +
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREG---AAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999   8999999987665544433   245678899999999988777653    4


Q ss_pred             CCCCEEEECCCccCc-------cccccCchhhhhccccccHHHHHhh----hhhccCceEEEeechhhhcccCCCCcccC
Q 020880           75 GQPDVVVNCAALSVP-------RVCENDPDSAMSINVPSSLVNWLSS----FTENKENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~-------~~~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                      +++|+|||+||....       ..+.++++..+++|+.+++ ++.++    +++.+..+||++||...|.          
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~----------  153 (253)
T 3qiv_A           85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGAL-WCTRAVYKKMTKRGGGAIVNQSSTAAWL----------  153 (253)
T ss_dssp             SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHTCEEEEEECC---------------
T ss_pred             CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHhcCCCEEEEECCccccC----------
Confidence            689999999997421       1123345678899999974 44444    4455566999999998873          


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                         +...|+.+|...+.+.+.+.       .++.+++|+.+.++........    .+... +.++.++       ..+.
T Consensus       154 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~-~~~~~~~-------~~~~  218 (253)
T 3qiv_A          154 ---YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPK----EMVDD-IVKGLPL-------SRMG  218 (253)
T ss_dssp             ---------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------------------------------------
T ss_pred             ---CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcH----HHHHH-HhccCCC-------CCCC
Confidence               24579999999998877642       3567899999998754211111    11111 1112222       2356


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      +++|+|++++.++.....  ...+.+|++.+|..+
T Consensus       219 ~~~dva~~~~~l~s~~~~--~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          219 TPDDLVGMCLFLLSDEAS--WITGQIFNVDGGQII  251 (253)
T ss_dssp             -CCHHHHHHHHHHSGGGT--TCCSCEEEC------
T ss_pred             CHHHHHHHHHHHcCcccc--CCCCCEEEECCCeec
Confidence            789999999999876432  123559999988654

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.91  E-value=9.9e-24  Score=177.51  Aligned_cols=222  Identities=16%  Similarity=0.089  Sum_probs=155.6

Q ss_pred             CcEEEEEcCC--ChhhHHHHHHHhhccCCCceEEEecCCCCC---hhhhhhhCCCcceEEEeeCCCcccHHHHHHHh---
Q 020880            3 KKRVLVVGGT--GYLGQHLLQGLSEIEGKPYDVAATHHSTPL---PQLLLDALPHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         3 ~~~ilItGat--G~IG~~l~~~L~~~g~~v~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      +|++|||||+  |+||++++++|+++|   ++|+++.|+...   ...+....+ ...++.+|++|++++.++++.+   
T Consensus         9 ~k~vlVTGas~~~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHREG---AELAFTYQNDKLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTT---CEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCC---CEEEEEcCcHHHHHHHHHHHHhcC-CcEEEEccCCCHHHHHHHHHHHHHH
Confidence            3689999999  999999999999999   899999998621   122222222 3467899999999988777643   


Q ss_pred             -CCCCEEEECCCccCc-----c----ccccCchhhhhccccccHHHHHhhhhhcc--CceEEEeechhhhcccCCCCccc
Q 020880           75 -GQPDVVVNCAALSVP-----R----VCENDPDSAMSINVPSSLVNWLSSFTENK--ENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        75 -~~~d~Vih~a~~~~~-----~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~~--~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                       +++|+|||+||....     +    .+..+++..+++|+.+++ ++++++...-  ..+||++||...+.+.       
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~g~iv~isS~~~~~~~-------  156 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFV-AMAKACRSMLNPGSALLTLSYLGAERAI-------  156 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHH-HHHHHHGGGEEEEEEEEEEECGGGTSBC-------
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHH-HHHHHHHHHhccCCEEEEEcchhhccCC-------
Confidence             578999999997642     1    233456778999999996 8888886641  2499999998876432       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                         .+...|+.+|...+.+.+.+       +.++.+++|+.|.++.....   .....+..... ...++       ..+
T Consensus       157 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~-~~~p~-------~~~  222 (265)
T 1qsg_A          157 ---PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI---KDFRKMLAHCE-AVTPI-------RRT  222 (265)
T ss_dssp             ---TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS---TTHHHHHHHHH-HHSTT-------SSC
T ss_pred             ---CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc---cccHHHHHHHH-hcCCC-------CCC
Confidence               23568999999999987754       34678899999998753211   01112222111 11121       236


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      .+++|+|++++.++.....  ...+.+|++.+|...+
T Consensus       223 ~~~~dva~~v~~l~s~~~~--~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          223 VTIEDVGNSAAFLCSDLSA--GISGEVVHVDGGFSIA  257 (265)
T ss_dssp             CCHHHHHHHHHHHTSGGGT--TCCSCEEEESTTGGGB
T ss_pred             CCHHHHHHHHHHHhCchhc--CccCCEEEECCCcCCC
Confidence            8999999999999875332  1235589999875543

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.91  E-value=3.2e-23  Score=175.81  Aligned_cols=228  Identities=11%  Similarity=0.056  Sum_probs=155.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-------------CChhhhh---hhCCCcceEEEeeCCCcc
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-------------PLPQLLL---DALPHSFVFFDVDLKSGS   65 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-------------~~~~~~~---~~~~~~~~~~~~Dl~d~~   65 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++.+|+.             +..+...   ...+..+.++.+|++|++
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   90 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEG---ADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA   90 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            35799999999999999999999999   8999988842             2222221   223456788999999999


Q ss_pred             cHHHHHHH----hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hcc-CceEEEeechhhh
Q 020880           66 GFDAVALK----FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENK-ENLLIHLSTDQVY  132 (320)
Q Consensus        66 ~~~~~~~~----~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~-~~~~v~~Ss~~vy  132 (320)
                      ++.++++.    ++++|++||+||......    +.++++..+++|+.+++ ++++++.    +.+ ..+||++||...+
T Consensus        91 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~~g~iv~isS~~~~  169 (280)
T 3pgx_A           91 ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTW-RTLRATVPAMIEAGNGGSIVVVSSSAGL  169 (280)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHhcCCCCEEEEEcchhhc
Confidence            88777653    468999999999865432    23345678889999986 7777763    333 4589999998876


Q ss_pred             cccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCce
Q 020880          133 EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKV  205 (320)
Q Consensus       133 ~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (320)
                      .+.          .+...|+.+|...+.+.+.+       +.++.+++|+.|.++...    .......+.........+
T Consensus       170 ~~~----------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~----~~~~~~~~~~~~~~~~~~  235 (280)
T 3pgx_A          170 KAT----------PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIE----PEAMMEIFARHPSFVHSF  235 (280)
T ss_dssp             SCC----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC----HHHHHHHHHHCGGGGGGS
T ss_pred             cCC----------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccc----hhhhhhhhhcCchhhhhh
Confidence            432          23678999999999977754       346678999999887532    000001111100001111


Q ss_pred             EeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          206 EFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       206 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .........+.+++|+|++++.++.....  ...+.++++.+|.
T Consensus       236 ~~~~~~~~r~~~p~dvA~~v~~L~s~~~~--~itG~~i~vdGG~  277 (280)
T 3pgx_A          236 PPMPVQPNGFMTADEVADVVAWLAGDGSG--TLTGTQIPVDKGA  277 (280)
T ss_dssp             CCBTTBCSSCBCHHHHHHHHHHHHSGGGT--TCSSCEEEESTTG
T ss_pred             hhcccCCCCCCCHHHHHHHHHHHhCcccc--CCCCCEEEECCCc
Confidence            11122112489999999999999876432  1235589998764

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.91  E-value=1e-23  Score=177.24  Aligned_cols=219  Identities=13%  Similarity=0.121  Sum_probs=154.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++..|+.++.....+..+..+.++.+|++|+++++++++.    ++++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQG---AIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGI  102 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999   8999999987776666665566788899999999998877653    4689


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||.....    ....+++..+++|+.+++ ++.+++    ++.+..+||++||...+.+.          .+..
T Consensus       103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~----------~~~~  171 (266)
T 3grp_A          103 DILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAAS-TLTRELIHSMMRRRYGRIINITSIVGVVGN----------PGQT  171 (266)
T ss_dssp             CEEEECCCCC-----CCCHHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCC-----------------CHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCcEEEEECCHHHcCCC----------CCch
Confidence            9999999986432    233456788899999975 555444    44556699999998765432          2367


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...+.+.+.+       +.++.+++|+.|..+-...     ....... .+....++       ..+.+.+|+|
T Consensus       172 ~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-----~~~~~~~-~~~~~~p~-------~r~~~~edvA  238 (266)
T 3grp_A          172 NYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK-----LNEKQKE-AIMAMIPM-------KRMGIGEEIA  238 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT-----CCHHHHH-HHHTTCTT-------CSCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc-----cCHHHHH-HHHhcCCC-------CCCcCHHHHH
Confidence            8999999988877654       2456789999997753211     1111221 22222222       3478899999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ++++.++.....  -..+.++++.+|.
T Consensus       239 ~~v~~L~s~~~~--~itG~~i~vdGG~  263 (266)
T 3grp_A          239 FATVYLASDEAA--YLTGQTLHINGGM  263 (266)
T ss_dssp             HHHHHHHSGGGT--TCCSCEEEESTTC
T ss_pred             HHHHHHhCcccc--CccCCEEEECCCe
Confidence            999999876432  1235599998874

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=2.3e-23  Score=173.71  Aligned_cols=199  Identities=15%  Similarity=0.100  Sum_probs=141.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----C-
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----G-   75 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~-   75 (320)
                      |++|+||||||+|+||++++++|+++|.. ++|+++.|+.+....+.+.....+.++.+|++|++++.++++.+    + 
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~-~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNI-RHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTC-CEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCC-cEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            77899999999999999999999999832 47888899876655443322346788999999999888777643    3 


Q ss_pred             -CCCEEEECCCccC-c----cccccCchhhhhccccccHHHHHhhhhhc----------c-----CceEEEeechhhhcc
Q 020880           76 -QPDVVVNCAALSV-P----RVCENDPDSAMSINVPSSLVNWLSSFTEN----------K-----ENLLIHLSTDQVYEG  134 (320)
Q Consensus        76 -~~d~Vih~a~~~~-~----~~~~~~~~~~~~~n~~~~~~~~l~~~~~~----------~-----~~~~v~~Ss~~vy~~  134 (320)
                       ++|+|||+||... .    .....+++..+++|+.+++ ++++++...          +     ..+||++||...+..
T Consensus        80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  158 (250)
T 1yo6_A           80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVV-LLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHH-HHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccC
Confidence             7999999999865 2    1223345678899999986 777776532          4     569999999887653


Q ss_pred             cCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEe
Q 020880          135 VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEF  207 (320)
Q Consensus       135 ~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (320)
                      ...   +.++..+...|+.+|...+.+++.+       +.++.++||+.+..+...                  .     
T Consensus       159 ~~~---~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~------------------~-----  212 (250)
T 1yo6_A          159 DNT---SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG------------------K-----  212 (250)
T ss_dssp             TCC---STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------
T ss_pred             Ccc---cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCC------------------C-----
Confidence            211   1223346778999999999987754       356788999998665321                  0     


Q ss_pred             ecCcccCceeHHHHHHHHHHHHhhh
Q 020880          208 FHDECRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       208 ~~~~~~~~i~v~D~a~~~~~~~~~~  232 (320)
                           ..+++.+|+|+.++.++...
T Consensus       213 -----~~~~~~~~~a~~~~~~~~~~  232 (250)
T 1yo6_A          213 -----NAALTVEQSTAELISSFNKL  232 (250)
T ss_dssp             -----------HHHHHHHHHHHTTC
T ss_pred             -----CCCCCHHHHHHHHHHHHhcc
Confidence                 02578999999999999874

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.91  E-value=1.5e-23  Score=176.44  Aligned_cols=223  Identities=14%  Similarity=0.133  Sum_probs=155.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhh-hh---hhCCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LL---DALPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~-~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      ||+++||||+|+||++++++|+++|   ++|+++.|+.+.... +.   ...+.++.++.+|++|++++.++++.    +
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKG---YSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCC---CEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            6789999999999999999999999   899988777544322 22   22235688899999999998877754    3


Q ss_pred             CCCCEEEECCCcc--Cc----cccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCC
Q 020880           75 GQPDVVVNCAALS--VP----RVCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        75 ~~~d~Vih~a~~~--~~----~~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      +++|+|||+||..  ..    +....+++..+++|+.+++ ++++++    ++.+..++|++||...++..        +
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--------~  154 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVF-HLLKLVVPVMRKQNFGRIINYGFQGADSAP--------G  154 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCTTGGGCC--------C
T ss_pred             CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHH-HHHHHHHHHHHhcCCCeEEEEeechhcccC--------C
Confidence            6899999999942  11    1223345678899999986 777777    56666799999998654321        1


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      ..+...|+.+|...+.+.+.+       +.++.+++|+.|+++...     ...... ........+       ...+.+
T Consensus       155 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-----~~~~~~-~~~~~~~~p-------~~r~~~  221 (264)
T 3i4f_A          155 WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKE-----ATIQEA-RQLKEHNTP-------IGRSGT  221 (264)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGS-----CCHHHH-HHC---------------CCCC
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccch-----hccHHH-HHHHhhcCC-------CCCCcC
Confidence            234678999999999877754       345688999999987542     112111 111111111       234689


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      .+|+|++++.++.....  ...+.++++.+|....
T Consensus       222 ~~dva~~v~~l~s~~~~--~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          222 GEDIARTISFLCEDDSD--MITGTIIEVTGAVDVI  254 (264)
T ss_dssp             HHHHHHHHHHHHSGGGT--TCCSCEEEESCSCCCC
T ss_pred             HHHHHHHHHHHcCcccC--CCCCcEEEEcCceeec
Confidence            99999999999976432  1235699999886543

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.91  E-value=1.7e-23  Score=177.21  Aligned_cols=227  Identities=15%  Similarity=0.069  Sum_probs=161.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHH----HhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVAL----KFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~----~~~   75 (320)
                      +|++|||||+|+||++++++|+++|   ++|++.+|+.+......+.+   +..+.++.+|++|++++.++++    .++
T Consensus         8 gk~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (280)
T 3tox_A            8 GKIAIVTGASSGIGRAAALLFAREG---AKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG   84 (280)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTT---CEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999   89999999976655544433   4567888999999998877765    346


Q ss_pred             CCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|++||+||....     ..+.++++..+++|+.+++ ++++++.    +.+..++|++||...+..         +..
T Consensus        85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------~~~  154 (280)
T 3tox_A           85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAF-LAAKYQVPAIAALGGGSLTFTSSFVGHTA---------GFA  154 (280)
T ss_dssp             CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCEEEEEECCSBTTTB---------CCT
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCCEEEEEcChhhCcC---------CCC
Confidence            89999999997532     2233456788999999986 7777654    344559999999887621         122


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.||...+.+.+.+       +.++.+++||.|..+........... ... ..+....+       ...+.+++
T Consensus       155 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~-~~~~~~~p-------~~r~~~pe  225 (280)
T 3tox_A          155 GVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAP-ETR-GFVEGLHA-------LKRIARPE  225 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCT-HHH-HHHHTTST-------TSSCBCHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCH-HHH-HHHhccCc-------cCCCcCHH
Confidence            4678999999999977764       34567899999988754211111111 111 12222222       23478999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCCCcCH
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR  253 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~  253 (320)
                      |+|++++.++.....  -..+.++++.+|..++.
T Consensus       226 dvA~~v~~L~s~~a~--~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          226 EIAEAALYLASDGAS--FVTGAALLADGGASVTK  257 (280)
T ss_dssp             HHHHHHHHHHSGGGT--TCCSCEEEESTTGGGCC
T ss_pred             HHHHHHHHHhCcccc--CCcCcEEEECCCccccc
Confidence            999999999876432  12356999999876554

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.91  E-value=4.8e-23  Score=171.39  Aligned_cols=220  Identities=15%  Similarity=0.140  Sum_probs=153.9

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC-CCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHH---
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r-~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      |++|+++||||+|+||++++++|+++|   ++|+++.| ++++.....+   ..+..+.++.+|++|++++.++++.   
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQG---ANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVD   78 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999   89999988 5444333322   2245678899999999988777653   


Q ss_pred             -hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCC
Q 020880           74 -FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                       ++++|+|||+||.....    ....+++..+++|+.+++ ++.+++    ++.+..+||++||...+.+.         
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  148 (246)
T 2uvd_A           79 VFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVF-LCTKAVSRFMMRQRHGRIVNIASVVGVTGN---------  148 (246)
T ss_dssp             HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCcEEEEECCHHhcCCC---------
Confidence             46899999999976432    123345678899999975 555544    44566799999998765432         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       .+...|+.+|...+.+.+.+       +.++.+++|+.+..+-.... ...    ...... ...+       ...+++
T Consensus       149 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~----~~~~~~-~~~p-------~~~~~~  214 (246)
T 2uvd_A          149 -PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL-DEN----IKAEML-KLIP-------AAQFGE  214 (246)
T ss_dssp             -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC-CTT----HHHHHH-HTCT-------TCSCBC
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc-CHH----HHHHHH-hcCC-------CCCCcC
Confidence             23668999999999876653       34678899999987643211 111    111111 1111       124789


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .+|+|++++.++.....  ...+.++++.+|.
T Consensus       215 ~~dvA~~~~~l~s~~~~--~~tG~~~~vdgG~  244 (246)
T 2uvd_A          215 AQDIANAVTFFASDQSK--YITGQTLNVDGGM  244 (246)
T ss_dssp             HHHHHHHHHHHHSGGGT--TCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHcCchhc--CCCCCEEEECcCc
Confidence            99999999999865321  1235589998764

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.91  E-value=3.4e-23  Score=174.90  Aligned_cols=219  Identities=18%  Similarity=0.157  Sum_probs=148.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEe-cCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      +|+||||||+|+||++++++|+++|   ++|+.. .|+.+..+.+.+   ..+..+.++.+|++|.+++.++++.    +
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQG---WRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999   888776 555444433332   2345788899999999988877754    3


Q ss_pred             CCCCEEEECCCccCc-c----ccccCchhhhhccccccHHHHHhhhhhc-------cCceEEEeechhhhcccCCCCccc
Q 020880           75 GQPDVVVNCAALSVP-R----VCENDPDSAMSINVPSSLVNWLSSFTEN-------KENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~-------~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                      +++|+|||+||.... .    .+..+++..+++|+.+++ ++++++...       +..+||++||...+....      
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  175 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSI-LCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA------  175 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT------
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC------
Confidence            689999999998643 1    133445678999999986 776666432       345899999988764321      


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                         .+...|+.+|...+.+.+.+       +.++.+++|+.|.++.....    ........ .....       ....+
T Consensus       176 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~-~~~~~-------~~~~~  240 (272)
T 4e3z_A          176 ---TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG----GLPDRARE-MAPSV-------PMQRA  240 (272)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------------CC-------TTSSC
T ss_pred             ---CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc----CChHHHHH-HhhcC-------CcCCC
Confidence               13457999999999977654       34678899999988753210    00011111 11111       22346


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      .+++|+|++++.++.....  ...+.+|++.+|
T Consensus       241 ~~~edvA~~i~~l~s~~~~--~~tG~~i~vdgG  271 (272)
T 4e3z_A          241 GMPEEVADAILYLLSPSAS--YVTGSILNVSGG  271 (272)
T ss_dssp             BCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCCccc--cccCCEEeecCC
Confidence            7899999999999875432  123569999876

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.91  E-value=3.8e-23  Score=173.66  Aligned_cols=216  Identities=15%  Similarity=0.104  Sum_probs=151.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      .+|+||||||+|+||++++++|+++|   ++|+++.|+++.        +..+.++.+|++|++++.++++.    ++++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   75 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEG---SKVIDLSIHDPG--------EAKYDHIECDVTNPDQVKASIDHIFKEYGSI   75 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESSCCC--------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEecCccc--------CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46799999999999999999999999   899999998654        23577899999999988776653    4689


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||.....    .+..+++..+++|+.+++ ++++++.    +.+..+||++||...+.+.          .+..
T Consensus        76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  144 (264)
T 2dtx_A           76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYY-YASKFAIPYMIRSRDPSIVNISSVQASIIT----------KNAS  144 (264)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHH-HHHHHHHHHHTTSSSCEEEEECCGGGTSCC----------TTBH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCcEEEEECCchhccCC----------CCch
Confidence            9999999976432    133456788999999985 6666664    3455699999999887532          2467


Q ss_pred             hHHHHHHHHHHHHHHHc------CCeeEEeecccccCCCCCCCC---CCChH---HHHHHHHhcCCceEeecCcccCcee
Q 020880          150 VYGKSKVAAEKFIYEKC------SNFAILRSSIIYGPQTISPVP---KSLPI---QWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~------~~~~ilR~~~v~G~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      .|+.+|...+.+.+.+.      .++.+++|+.+.++-......   .....   ..... +...       .....+++
T Consensus       145 ~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~p~~~~~~  216 (264)
T 2dtx_A          145 AYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISE-WGHE-------HPMQRIGK  216 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHH-HHHH-------STTSSCBC
T ss_pred             hHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHH-HHhc-------CCCCCCcC
Confidence            89999999999877653      456789999986542100000   00000   00000 0000       11235899


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ++|+|++++.++.....  ...+.++++.+|.
T Consensus       217 p~dvA~~v~~l~s~~~~--~~tG~~i~vdGG~  246 (264)
T 2dtx_A          217 PQEVASAVAFLASREAS--FITGTCLYVDGGL  246 (264)
T ss_dssp             HHHHHHHHHHHHSGGGT--TCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHhCchhc--CCCCcEEEECCCc
Confidence            99999999999876421  1235589998864

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.91  E-value=2.2e-23  Score=179.86  Aligned_cols=216  Identities=16%  Similarity=0.092  Sum_probs=142.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-----hhhhh---hhCCCcceEEEeeCCCcccHHHHHH-
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-----PQLLL---DALPHSFVFFDVDLKSGSGFDAVAL-   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-----~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~-   72 (320)
                      ++|++|||||+|+||++++++|+++|   ++|++..|+...     .+.+.   ...+..+.++.+|++|++++.++++ 
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G---~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAG---HRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            35789999999999999999999999   899988886321     12211   1224568889999999998877775 


Q ss_pred             ---HhCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcc
Q 020880           73 ---KFGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        73 ---~~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                         .++++|+|||+||.....    .+..+++..+++|+.+++ ++++++    ++.+..++|++||...+...      
T Consensus        81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~a~lp~m~~~~~g~iV~isS~~~~~~~------  153 (324)
T 3u9l_A           81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQ-RVNRAALPHMRRQKHGLLIWISSSSSAGGT------  153 (324)
T ss_dssp             HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCC------
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCEEEEEecchhccCC------
Confidence               346899999999976432    123345677899999996 888877    56666799999999876421      


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCC--CCChHHHHHHHHhcCCceEeecC--
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVP--KSLPIQWIDSVLSKGEKVEFFHD--  210 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--  210 (320)
                         ......|+.||...|.+.+.+       +.++.+++||.+.++.......  ..... ...... ..........  
T Consensus       154 ---~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~  228 (324)
T 3u9l_A          154 ---PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHA-RQAEYE-AGPNAGLGEEIK  228 (324)
T ss_dssp             ---CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHH-HHHHHH-HTTTTTHHHHHH
T ss_pred             ---CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHH-HHHhhc-cccccCCHHHHH
Confidence               112568999999999987764       3467889999998664321100  01111 111100 0000000000  


Q ss_pred             -----cccCceeHHHHHHHHHHHHhhh
Q 020880          211 -----ECRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       211 -----~~~~~i~v~D~a~~~~~~~~~~  232 (320)
                           ...+..+++|+|++++.++..+
T Consensus       229 ~~~~~l~~~~~~p~~vA~aiv~~~~~~  255 (324)
T 3u9l_A          229 KAFAAIVPPDADVSLVADAIVRVVGTA  255 (324)
T ss_dssp             HHHHHTSCTTCCTHHHHHHHHHHHTSC
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHhcCC
Confidence                 0112368999999999999875

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.90  E-value=3.6e-23  Score=174.19  Aligned_cols=220  Identities=15%  Similarity=0.114  Sum_probs=154.4

Q ss_pred             CCcEEEEEcCCCh-hhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----CCcceEEEeeCCCcccHHHHHHH---
Q 020880            2 SKKRVLVVGGTGY-LGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         2 ~~~~ilItGatG~-IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      ++|++|||||+|+ ||++++++|+++|   ++|++++|+.+......+.+    ..++.++.+|++|+++++++++.   
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEG---ADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCC---CEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            4689999999985 9999999999999   89999999876655444332    35788999999999998777654   


Q ss_pred             -hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhhc-----cCceEEEeechhhhcccCCCCcccC
Q 020880           74 -FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTEN-----KENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~~-----~~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                       ++++|+|||+||......    ...+++..+++|+.+++ ++++++...     +..+||++||...+.+.        
T Consensus        98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  168 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVM-RATRAALRYFRGVDHGGVIVNNASVLGWRAQ--------  168 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHTSSCCEEEEEECCGGGTCCC--------
T ss_pred             HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC--------
Confidence             368999999999765422    23345678899999986 777776542     44589999998876432        


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                        .+...|+.+|...+.+.+.+       +.++.+++|+.|..+-......    ..... .+...       .....+.
T Consensus       169 --~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~-~~~~~-------~~~~r~~  234 (266)
T 3o38_A          169 --HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS----SELLD-RLASD-------EAFGRAA  234 (266)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC----------------------C-------CTTSSCC
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc----HHHHH-HHHhc-------CCcCCCC
Confidence              34678999999999988754       3456789999997764311100    00111 01011       1234578


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +.+|+|+++++++.....  ...+.++++.+|.
T Consensus       235 ~~~dva~~i~~l~s~~~~--~~tG~~i~vdgG~  265 (266)
T 3o38_A          235 EPWEVAATIAFLASDYSS--YMTGEVVSVSSQR  265 (266)
T ss_dssp             CHHHHHHHHHHHHSGGGT--TCCSCEEEESSCC
T ss_pred             CHHHHHHHHHHHcCcccc--CccCCEEEEcCCc
Confidence            999999999999876432  2235699998864

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.90  E-value=3e-23  Score=174.41  Aligned_cols=224  Identities=16%  Similarity=0.134  Sum_probs=158.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++..|+.++.+...+.   .+..+.++.+|++|++++.++++.    +
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQG---ADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999   8999999987665544332   245788899999999998777653    4


Q ss_pred             CCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +++|++||+||....     ..+.++++..+++|+.+++ ++++++..    .+ .+||++||...+...          
T Consensus        87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----------  154 (264)
T 3ucx_A           87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGAL-RLIQGFTPALEESK-GAVVNVNSMVVRHSQ----------  154 (264)
T ss_dssp             SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHTHHHHHHHT-CEEEEECCGGGGCCC----------
T ss_pred             CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcC-CEEEEECcchhccCC----------
Confidence            689999999987522     1223445678999999996 77777643    23 599999999876432          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCC------CCCChHHHHHHHHhcCCceEeecCcc
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPV------PKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                      .+...|+.+|...+.+.+.+       +.++.+++|+.|+++......      .......+. .....+.       ..
T Consensus       155 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------p~  226 (264)
T 3ucx_A          155 AKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIY-NAAAAGS-------DL  226 (264)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHH-HHHHTTS-------SS
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHH-HHHhccC-------Cc
Confidence            23668999999999977654       356788999999876421000      000000111 1111222       23


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ..+.+++|+|++++.++.....  ...+.++++.+|..
T Consensus       227 ~r~~~p~dvA~~v~~L~s~~~~--~itG~~i~vdGG~~  262 (264)
T 3ucx_A          227 KRLPTEDEVASAILFMASDLAS--GITGQALDVNCGEY  262 (264)
T ss_dssp             SSCCBHHHHHHHHHHHHSGGGT--TCCSCEEEESTTSS
T ss_pred             ccCCCHHHHHHHHHHHcCcccc--CCCCCEEEECCCcc
Confidence            4578999999999999876432  12355999988764

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.90  E-value=5.6e-23  Score=175.06  Aligned_cols=222  Identities=16%  Similarity=0.182  Sum_probs=158.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhh----hhhhCCCcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL----LLDALPHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~----~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++..|+.+....    .....+..+.++.+|++|+++++++++    .
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEG---ANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999   899999998653222    223335578889999999998777665    4


Q ss_pred             hCCCCEEEECCCccCcc-----ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCC
Q 020880           74 FGQPDVVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++++|++||+||.....     .+.++++..+++|+.+++ ++++++...  ...+||++||...+....          
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------  191 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYF-HVTKAALSHLKQGDVIINTASIVAYEGNE----------  191 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHH-HHHHHHHTTCCTTCEEEEECCTHHHHCCT----------
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHhhCCEEEEEechHhcCCCC----------
Confidence            46899999999976432     133456788999999996 888888653  234899999998875432          


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+.+.+       +.++.+++|+.|.++....    ........ .+....       ....+.+.+
T Consensus       192 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~----~~~~~~~~-~~~~~~-------p~~r~~~p~  259 (291)
T 3ijr_A          192 TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS----SFDEKKVS-QFGSNV-------PMQRPGQPY  259 (291)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH----HSCHHHHH-HTTTTS-------TTSSCBCGG
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc----cCCHHHHH-HHHccC-------CCCCCcCHH
Confidence            3678999999999877754       3567889999998763210    00001111 111111       234578999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      |+|++++.++.....  ...+.++++.+|..+
T Consensus       260 dvA~~v~~L~s~~~~--~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          260 ELAPAYVYLASSDSS--YVTGQMIHVNGGVIV  289 (291)
T ss_dssp             GTHHHHHHHHSGGGT--TCCSCEEEESSSCCC
T ss_pred             HHHHHHHHHhCCccC--CCcCCEEEECCCccc
Confidence            999999999876432  123569999887543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.90  E-value=2.6e-23  Score=175.12  Aligned_cols=222  Identities=14%  Similarity=0.117  Sum_probs=158.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++..|+.+..+.....+   +..+.++.+|++|++++.++++    .+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRG---AMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            36799999999999999999999999   89999999876554443322   4467789999999998877665    34


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|+|||+||.....    ...++++..+++|+.+++ ++++++.    +.+..+||++||...+...          .
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  172 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVF-RLSRAVLRPMMKARGGRIVNITSVVGSAGN----------P  172 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------T
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCCEEEEECchhhCCCC----------C
Confidence            6899999999976542    233455678999999996 7777664    3444589999998876432          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+.+.+       +.++.+++|+.|..+-...     ...... ..+....+       ...+.+.+
T Consensus       173 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-----~~~~~~-~~~~~~~p-------~~r~~~pe  239 (270)
T 3ftp_A          173 GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG-----LPQEQQ-TALKTQIP-------LGRLGSPE  239 (270)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH-----SCHHHH-HHHHTTCT-------TCSCBCHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh-----cCHHHH-HHHHhcCC-------CCCCCCHH
Confidence            4678999999998877654       3456789999987653210     011111 11222222       23478999


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      |+|++++.++.....  ...+.++++.+|..+|
T Consensus       240 dvA~~v~~L~s~~~~--~itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          240 DIAHAVAFLASPQAG--YITGTTLHVNGGMFMS  270 (270)
T ss_dssp             HHHHHHHHHHSGGGT--TCCSCEEEESTTSSCC
T ss_pred             HHHHHHHHHhCCCcC--CccCcEEEECCCcccC
Confidence            999999999865332  1235699999886543

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.90  E-value=3.4e-23  Score=174.76  Aligned_cols=222  Identities=16%  Similarity=0.088  Sum_probs=156.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHH---HhC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVAL---KFG   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~---~~~   75 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++.+|++ ......+   ..+..+.++.+|++|.+++.++.+   .++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAG---AHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR  105 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            36899999999999999999999999   8898888763 2222222   224567889999999998876654   336


Q ss_pred             CCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++|+|||+||......    +.++++..+++|+.+++ ++++++    ++.+..+||++||...+.+.          .+
T Consensus       106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~g~IV~isS~~~~~~~----------~~  174 (273)
T 3uf0_A          106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAW-VLSRSFGTAMLAHGSGRIVTIASMLSFQGG----------RN  174 (273)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------SS
T ss_pred             CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCEEEEEcchHhcCCC----------CC
Confidence            8999999999865422    23445678999999996 777766    34555699999999887432          24


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+.+.+       +.++.+++||.|..+.......   ......... ...+       ...+.+++|
T Consensus       175 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~-~~~p-------~~r~~~ped  243 (273)
T 3uf0_A          175 VAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRA---DDERAAEIT-ARIP-------AGRWATPED  243 (273)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT---SHHHHHHHH-HHST-------TSSCBCGGG
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhccc---CHHHHHHHH-hcCC-------CCCCCCHHH
Confidence            678999999999987764       3456789999998764310000   001111111 1111       234788999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      +|++++.++.....  ...+.++++.+|...
T Consensus       244 va~~v~~L~s~~a~--~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          244 MVGPAVFLASDAAS--YVHGQVLAVDGGWLA  272 (273)
T ss_dssp             GHHHHHHHHSGGGT--TCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhCchhc--CCcCCEEEECcCccC
Confidence            99999999876432  123559999987544

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.90  E-value=5.4e-23  Score=173.11  Aligned_cols=230  Identities=14%  Similarity=0.120  Sum_probs=158.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      +|++|||||+|+||++++++|+++|   ++|++.+|+.+......+.+     ...+.++.+|++|++++.++++.++++
T Consensus        10 ~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i   86 (267)
T 3t4x_A           10 GKTALVTGSTAGIGKAIATSLVAEG---ANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV   86 (267)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence            4799999999999999999999999   89999999876554433322     235677899999999999999988899


Q ss_pred             CEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |++||+||...+..    ..++++..+++|+.+++ .+.+++    ++.+..++|++||...+.+.          .+..
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  155 (267)
T 3t4x_A           87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGV-RLTRSYLKKMIERKEGRVIFIASEAAIMPS----------QEMA  155 (267)
T ss_dssp             SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTEEEEEEECCGGGTSCC----------TTCH
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhCCCCEEEEEcchhhccCC----------Ccch
Confidence            99999999865432    22344567899999975 555544    44555699999999877432          3467


Q ss_pred             hHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCC------CCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          150 VYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTI------SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                      .|+.+|...+.+.+.+.       .++..++|+.+..+...      ...............+....+    ......+.
T Consensus       156 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~r~~  231 (267)
T 3t4x_A          156 HYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRP----TSIIQRLI  231 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCT----TCSSCSCB
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCC----cccccCcc
Confidence            89999999999887653       24567999988764210      000000011111111110000    01134589


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      +++|+|++++.++.....  -..+.++++.+|...+
T Consensus       232 ~pedvA~~v~fL~s~~~~--~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          232 RPEEIAHLVTFLSSPLSS--AINGSALRIDGGLVRS  265 (267)
T ss_dssp             CTHHHHHHHHHHHSGGGT--TCCSCEEEESTTCSCS
T ss_pred             CHHHHHHHHHHHcCcccc--CccCCeEEECCCcccc
Confidence            999999999999875332  1235699999987655

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=2.5e-23  Score=178.54  Aligned_cols=224  Identities=9%  Similarity=0.133  Sum_probs=155.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh--------CCCcceEEEeeCCCcccHHHHHHH
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA--------LPHSFVFFDVDLKSGSGFDAVALK   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~~   73 (320)
                      .+|+|+||||+|+||++++++|+++|   ++|+++.|+.+......+.        .+..+.++.+|++|++++.++++.
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELG---SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            46899999999999999999999999   8999999986554433322        234688899999999988877754


Q ss_pred             ----hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCcc
Q 020880           74 ----FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        74 ----~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                          ++++|+|||+||.....    ....+++..+++|+.+++ ++++++..    .+..++|++||...++        
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~--------  164 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF-YMCKAVYSSWMKEHGGSIVNIIVPTKAG--------  164 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHTHHHHCEEEEEECCCCTTC--------
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHhcCCeEEEEEeecccC--------
Confidence                45799999999965322    122345677899999996 88887654    3345899999987322        


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                         ..+...|+.+|...+.+.+.+       +.++.++||+.++|+........ .....+.... ...       ....
T Consensus       165 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~-~~~-------p~~~  232 (303)
T 1yxm_A          165 ---FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGS-WGQSFFEGSF-QKI-------PAKR  232 (303)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGG-GGGGGGTTGG-GGS-------TTSS
T ss_pred             ---CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccc-cchHHHHHHH-hcC-------cccC
Confidence               123568999999999877654       34678999999999842111000 0000010000 011       1234


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      +.+++|+|++++.++.....  ...+..+++.+|...
T Consensus       233 ~~~~~dvA~~i~~l~~~~~~--~~~G~~~~v~gG~~~  267 (303)
T 1yxm_A          233 IGVPEEVSSVVCFLLSPAAS--FITGQSVDVDGGRSL  267 (303)
T ss_dssp             CBCTHHHHHHHHHHHSGGGT--TCCSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHhCcccc--cCCCcEEEECCCeec
Confidence            78999999999999865422  123558999987644

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.90  E-value=5.4e-23  Score=174.18  Aligned_cols=224  Identities=13%  Similarity=0.060  Sum_probs=156.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHH----HhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVAL----KFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----~~~   75 (320)
                      +|++|||||+|+||++++++|+++|   ++|++..|+.+......+.   .+..+.++.+|++|++++.++++    .++
T Consensus        24 ~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           24 PQTAFVTGVSSGIGLAVARTLAARG---IAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999999   8999999987665544332   24568889999999998877665    346


Q ss_pred             CCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhh------ccCceEEEeechhhhcccCCCCcccCCC
Q 020880           76 QPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTE------NKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~------~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++|+|||+||......    ...+++..+++|+.+++ ++++++..      .+..+||++||...+.+.          
T Consensus       101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~----------  169 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVF-RVTREVLRAGGMREAGWGRIVNIASTGGKQGV----------  169 (279)
T ss_dssp             SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC----------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHhchhhHhhcCCcEEEEECChhhccCC----------
Confidence            8999999999865321    22345677889999986 77776643      455699999999876432          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCC-----CCCCCChHHHHHHHHhcCCceEeecCccc
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTIS-----PVPKSLPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                      .+...|+.+|...+.+.+.+       +.++.+++|+.|..+-...     ..............+....+       ..
T Consensus       170 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~  242 (279)
T 3sju_A          170 MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIP-------LG  242 (279)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCT-------TS
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCC-------CC
Confidence            23678999999999877754       2456789999997653110     00000000111111212222       23


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .+.+++|+|++++.++.....  ...+.++++.+|.
T Consensus       243 r~~~pedvA~~v~~L~s~~a~--~itG~~i~vdGG~  276 (279)
T 3sju_A          243 RYSTPEEVAGLVGYLVTDAAA--SITAQALNVCGGL  276 (279)
T ss_dssp             SCBCHHHHHHHHHHHTSSGGG--GCCSCEEEESTTC
T ss_pred             CCCCHHHHHHHHHHHhCcccc--CcCCcEEEECCCc
Confidence            578999999999999876432  1235599998874

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.90  E-value=1.1e-22  Score=171.20  Aligned_cols=222  Identities=16%  Similarity=0.132  Sum_probs=154.7

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----CCcceEEEeeCCCcccHHHHHH----
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDLKSGSGFDAVAL----   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~----   72 (320)
                      |++|++|||||+|+||++++++|+++|   ++|+++.|+.+........+    +..+.++.+|++|++++.++++    
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAG---CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   95 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            346899999999999999999999999   89999999866544433222    4567788999999998877665    


Q ss_pred             HhCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechh-hhcccCCCCcccC
Q 020880           73 KFGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQ-VYEGVKSFYKEED  143 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~-vy~~~~~~~~E~~  143 (320)
                      .++++|+|||+||......    ...+++..+++|+.+++ ++++++    ++.+..+||++||.. .+.+         
T Consensus        96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------  165 (267)
T 1vl8_A           96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTY-YVCREAFSLLRESDNPSIINIGSLTVEEVT---------  165 (267)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHTTCSSCEEEEECCGGGTCCC---------
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCcEEEEECCcchhccC---------
Confidence            3468999999999764321    22334677889999986 776655    455667999999987 3221         


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                       ..+...|+.+|...+.+.+.+       +.++.+++|+.+..+-......  . ........ ...+       ...++
T Consensus       166 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~-~~~~~~~~-~~~p-------~~~~~  233 (267)
T 1vl8_A          166 -MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS--D-PEKLDYML-KRIP-------LGRTG  233 (267)
T ss_dssp             -SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT--C-HHHHHHHH-HTCT-------TSSCB
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccccc--C-hHHHHHHH-hhCC-------CCCCc
Confidence             224678999999999987764       4577899999997653210000  0 01111111 1111       12478


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +.+|+|++++.++.....  ...+..+++.+|.
T Consensus       234 ~p~dvA~~v~~l~s~~~~--~itG~~i~vdGG~  264 (267)
T 1vl8_A          234 VPEDLKGVAVFLASEEAK--YVTGQIIFVDGGW  264 (267)
T ss_dssp             CGGGGHHHHHHHHSGGGT--TCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHcCcccc--CCcCCeEEECCCC
Confidence            999999999999876322  1235588888764

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.90  E-value=9.5e-24  Score=177.93  Aligned_cols=223  Identities=12%  Similarity=0.059  Sum_probs=158.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++.+|+.+......+.   .+..+.++.+|++|++++.++++.    +
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAG---ARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT---CEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            36899999999999999999999999   8999999987665544433   245678899999999998777753    4


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|+|||+||.....    .+.++++..+++|+.+++ ++++++.    +.+..+||++||...+.+.          .
T Consensus       102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~g~iV~isS~~~~~~~----------~  170 (271)
T 4ibo_A          102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAF-MIGREAAKRMIPRGYGKIVNIGSLTSELAR----------A  170 (271)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSBC----------T
T ss_pred             CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCcEEEEEccHHhCCCC----------C
Confidence            6899999999986432    233455678999999986 7755554    3455699999998765432          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+.+.+       +.++..++|+.|..+-.......   ..+. ..+....+       ...+.+.+
T Consensus       171 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~-~~~~~~~p-------~~r~~~pe  239 (271)
T 4ibo_A          171 TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN---PEFD-AWVKARTP-------AKRWGKPQ  239 (271)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC---HHHH-HHHHHHST-------TCSCBCGG
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC---HHHH-HHHHhcCC-------CCCCcCHH
Confidence            4678999999999987764       34567899999987642100000   0111 11111112       23468899


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      |+|++++.++.....  ...+.++++.+|...
T Consensus       240 dva~~v~~L~s~~~~--~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          240 ELVGTAVFLSASASD--YVNGQIIYVDGGMLS  269 (271)
T ss_dssp             GGHHHHHHHHSGGGT--TCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHhCcccc--CCCCcEEEECCCeec
Confidence            999999998876432  123569999987654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.90  E-value=6.7e-23  Score=174.51  Aligned_cols=236  Identities=13%  Similarity=0.072  Sum_probs=160.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC------------hhhh---hhhCCCcceEEEeeCCCccc
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL------------PQLL---LDALPHSFVFFDVDLKSGSG   66 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~------------~~~~---~~~~~~~~~~~~~Dl~d~~~   66 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++++|+...            ....   ....+..+.++.+|++|+++
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   85 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEG---ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA   85 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC---CeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence            35899999999999999999999999   889998887321            1111   12234578889999999998


Q ss_pred             HHHHHH----HhCCCCEEEECCCccCcc--ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccC-C
Q 020880           67 FDAVAL----KFGQPDVVVNCAALSVPR--VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVK-S  137 (320)
Q Consensus        67 ~~~~~~----~~~~~d~Vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~-~  137 (320)
                      +.++++    .++++|+|||+||.....  .+..+++..+++|+.+++ ++++++...  +..++|++||...+.... .
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~  164 (287)
T 3pxx_A           86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVI-NTVHAALPYLTSGASIITTGSVAGLIAAAQP  164 (287)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHH-HHHHHHGGGCCTTCEEEEECCHHHHHHHHCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhH-HHHHHHHHHhhcCcEEEEeccchhccccccc
Confidence            877665    346899999999986543  233456788999999996 888888653  234899999988775432 2


Q ss_pred             CCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcC----Cc--
Q 020880          138 FYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKG----EK--  204 (320)
Q Consensus       138 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~----~~--  204 (320)
                      +..|..+..+...|+.+|...+.+.+.+       +.++.+++|+.|..+....     ..  .. ......    ..  
T Consensus       165 ~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-----~~--~~-~~~~~~~~~~~~~~  236 (287)
T 3pxx_A          165 PGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNS-----AP--MY-RQFRPDLEAPSRAD  236 (287)
T ss_dssp             C-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSS-----HH--HH-HHHCTTSSSCCHHH
T ss_pred             ccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccc-----cc--hh-hhhccccccchhHH
Confidence            3344444445678999999999977654       4567889999998875321     00  00 000000    00  


Q ss_pred             ----eEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          205 ----VEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       205 ----~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                          ..........+.+++|+|++++.++.....  -..+.++++.+|...
T Consensus       237 ~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~--~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          237 ALLAFPAMQAMPTPYVEASDISNAVCFLASDESR--YVTGLQFKVDAGAML  285 (287)
T ss_dssp             HHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTGGG
T ss_pred             HHhhhhhhcccCCCCCCHHHHHhhHheecchhhc--CCCCceEeECchhhh
Confidence                000011114689999999999999865432  123559999988544

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.90  E-value=7.2e-23  Score=172.05  Aligned_cols=219  Identities=16%  Similarity=0.125  Sum_probs=154.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++..|+.+....        ...+.+|++|.+++.++++    .++++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~~~~--------~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   95 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAG---ARVAVADRAVAGIAA--------DLHLPGDLREAAYADGLPGAVAAGLGRL   95 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT---CEEEECSSCCTTSCC--------SEECCCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHh--------hhccCcCCCCHHHHHHHHHHHHHhcCCC
Confidence            36899999999999999999999999   899999998655422        1235789999988776654    34689


Q ss_pred             CEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||......    ..++++..+++|+.+++ ++++++    ++.+..+||++||...+.+.          .+..
T Consensus        96 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~  164 (266)
T 3uxy_A           96 DIVVNNAGVISRGRITETTDADWSLSLGVNVEAPF-RICRAAIPLMAAAGGGAIVNVASCWGLRPG----------PGHA  164 (266)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCSBTTBCC----------TTBH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCcEEEEECCHHhCCCC----------CCCh
Confidence            99999999875422    23445677889999996 777777    55556699999998876432          3467


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCC--CCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPV--PKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      .|+.||...+.+.+.+       +.++.+++|+.|.++......  .......... .+....       ....+.+++|
T Consensus       165 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~-------p~~r~~~ped  236 (266)
T 3uxy_A          165 LYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVA-ELGRTV-------PLGRIAEPED  236 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHH-HHHTTS-------TTSSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHH-HHHhcC-------CCCCCcCHHH
Confidence            8999999999987764       345678999999875321000  0000001111 111121       2345789999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      +|++++.++......  ..+.++++.+|..++
T Consensus       237 vA~~v~~L~s~~~~~--itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          237 IADVVLFLASDAARY--LCGSLVEVNGGKAVA  266 (266)
T ss_dssp             HHHHHHHHHSGGGTT--CCSCEEEESTTCCCC
T ss_pred             HHHHHHHHhCchhcC--CcCCEEEECcCEeCC
Confidence            999999998764321  235599999887653

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.90  E-value=1.1e-22  Score=171.94  Aligned_cols=219  Identities=16%  Similarity=0.114  Sum_probs=153.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC--CcceEEEeeCCCcccHHHHHHH----hC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--HSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      .+|+++||||+|+||++++++|+++|   ++|+++.|+.+......+.+.  .++.++.+|++|++++.++++.    ++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAG---ARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            35799999999999999999999999   899999998765544433321  2577788999999988777653    46


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccC----ceEEEeechhhhcccCCCCcccC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKE----NLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~----~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                      ++|+|||+||.....    ...++++..+++|+.+++ ++++++.    +.+.    .+||++||...+.+..       
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~-------  176 (276)
T 2b4q_A          105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVF-SCIQQLLPLLRRSASAENPARVINIGSVAGISAMG-------  176 (276)
T ss_dssp             CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHH-HHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC-------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC-------
Confidence            899999999976432    223345678899999985 6666553    3333    6999999998875321       


Q ss_pred             CCCCcc-hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhc--CCceEeecCccc
Q 020880          144 EIAPVN-VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSK--GEKVEFFHDECR  213 (320)
Q Consensus       144 ~~~p~~-~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  213 (320)
                         +.. .|+.+|...+.+.+.+       +.++.+++|+.+..+-..     ........ .+..  ..+       ..
T Consensus       177 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~-----~~~~~~~~-~~~~~~~~p-------~~  240 (276)
T 2b4q_A          177 ---EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTR-----HIANDPQA-LEADSASIP-------MG  240 (276)
T ss_dssp             ---CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTH-----HHHHCHHH-HHHHHHTST-------TS
T ss_pred             ---CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchh-----hcchhHHH-HHHhhcCCC-------CC
Confidence               234 7999999999987764       346688999999766321     00000001 1111  111       23


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .+.+.+|+|++++.++.....  ...+.++++.+|.
T Consensus       241 r~~~p~dvA~~v~~l~s~~~~--~~tG~~i~vdGG~  274 (276)
T 2b4q_A          241 RWGRPEEMAALAISLAGTAGA--YMTGNVIPIDGGF  274 (276)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTT
T ss_pred             CcCCHHHHHHHHHHHhCcccc--CCCCCEEEeCCCc
Confidence            478999999999999876421  1235589998774

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.90  E-value=3.8e-23  Score=174.93  Aligned_cols=199  Identities=16%  Similarity=0.119  Sum_probs=147.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhh-ccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSE-IEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~-~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      .+|+||||||+|+||++++++|++ +|   ++|++++|+.+......+.   .+.++.++.+|++|.+++.++++.    
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFS---GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSS---SEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcC---CeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence            478999999999999999999999 89   8999999986554443332   245678899999999988777653    


Q ss_pred             hCCCCEEEECCCccCcccc----ccCchhhhhccccccHHHHHhhhhhcc--CceEEEeechhhhccc------------
Q 020880           74 FGQPDVVVNCAALSVPRVC----ENDPDSAMSINVPSSLVNWLSSFTENK--ENLLIHLSTDQVYEGV------------  135 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~~~l~~~~~~~--~~~~v~~Ss~~vy~~~------------  135 (320)
                      ++++|+|||+||.......    ..+++..+++|+.+++ ++++++...-  ..+||++||...+...            
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~  158 (276)
T 1wma_A           80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTR-DVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFR  158 (276)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHH-HHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred             cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHH-HHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcc
Confidence            3589999999997643221    2345678999999996 8888887652  2499999998876421            


Q ss_pred             CCCCcccC-------------------CCCCcchHHHHHHHHHHHHHHH-----------cCCeeEEeecccccCCCCCC
Q 020880          136 KSFYKEED-------------------EIAPVNVYGKSKVAAEKFIYEK-----------CSNFAILRSSIIYGPQTISP  185 (320)
Q Consensus       136 ~~~~~E~~-------------------~~~p~~~Y~~sK~~~e~~~~~~-----------~~~~~ilR~~~v~G~~~~~~  185 (320)
                      ..+++|++                   +..|.+.|+.+|...|.+++.+           +.++.+++|+.|..+-... 
T Consensus       159 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-  237 (276)
T 1wma_A          159 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-  237 (276)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-
T ss_pred             ccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-
Confidence            11233332                   1234579999999999877643           4567889999987653210 


Q ss_pred             CCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhh
Q 020880          186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  232 (320)
                                                 ..+++.+|+|++++.++..+
T Consensus       238 ---------------------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          238 ---------------------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             ---------------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             ---------------------------cccCChhHhhhhHhhhhcCc
Confidence                                       13588999999999999754

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.90  E-value=8.6e-24  Score=177.14  Aligned_cols=219  Identities=11%  Similarity=0.023  Sum_probs=147.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh-CCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF-GQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~d~Vi   81 (320)
                      ||+||||||+|+||++++++|+++|   ++|++++|++++...         . +.+|++|.++++++++.+ +++|+||
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~~---------~-~~~Dl~~~~~v~~~~~~~~~~id~lv   67 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAG---HQIVGIDIRDAEVIA---------D-LSTAEGRKQAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSSSEEC---------C-TTSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCchhhcc---------c-cccCCCCHHHHHHHHHHhCCCCCEEE
Confidence            5789999999999999999999999   899999998755321         1 578999999999988876 6889999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCC-CCccc--------------
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKS-FYKEE--------------  142 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~-~~~E~--------------  142 (320)
                      |+||....   ...++..+++|+.+++ ++++++.    +.+..+||++||...+..... +..+.              
T Consensus        68 ~~Ag~~~~---~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (257)
T 1fjh_A           68 LCAGLGPQ---TKVLGNVVSVNYFGAT-ELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIV  143 (257)
T ss_dssp             ECCCCCTT---CSSHHHHHHHHTHHHH-HHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHH
T ss_pred             ECCCCCCC---cccHHHHHHHhhHHHH-HHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhh
Confidence            99997642   1247889999999986 7777764    455569999999998832111 11000              


Q ss_pred             ---CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcc
Q 020880          143 ---DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       143 ---~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                         .+..+...|+.||...+.+.+.+       +.++.+++|+.+.++........    ........ .  +   ....
T Consensus       144 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~-~--~---~~~~  213 (257)
T 1fjh_A          144 EHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD----PRYGESIA-K--F---VPPM  213 (257)
T ss_dssp             HTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------------C---CCST
T ss_pred             hcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccc----hhHHHHHH-h--c---cccc
Confidence               12234678999999999987754       45778999999987653211000    00001010 0  0   1112


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ..+++++|+|++++.++..+..  ...+..+++.+|..
T Consensus       214 ~~~~~~~dvA~~~~~l~~~~~~--~~tG~~~~vdgG~~  249 (257)
T 1fjh_A          214 GRRAEPSEMASVIAFLMSPAAS--YVHGAQIVIDGGID  249 (257)
T ss_dssp             TSCCCTHHHHHHHHHHTSGGGT--TCCSCEEEESTTHH
T ss_pred             CCCCCHHHHHHHHHHHhCchhc--CCcCCEEEECCCcc
Confidence            2478999999999999876422  12355899988743

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=1.1e-23  Score=179.98  Aligned_cols=236  Identities=14%  Similarity=0.082  Sum_probs=162.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CC---cceEEEeeCCCcccHHHHHH----
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PH---SFVFFDVDLKSGSGFDAVAL----   72 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dl~d~~~~~~~~~----   72 (320)
                      +|++|||||+|+||++++++|+++|   ++|+++.|+.++.....+.+   +.   .+.++.+|++|++++.++++    
T Consensus        26 ~k~vlVTGas~gIG~aia~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           26 GKSVIITGSSNGIGRSAAVIFAKEG---AQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999   89999999876554433322   22   57889999999998877665    


Q ss_pred             HhCCCCEEEECCCccCccc------cccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCccc
Q 020880           73 KFGQPDVVVNCAALSVPRV------CENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~------~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                      .++++|+|||+||......      ..++++..+++|+.+++ ++++++..    .+ .+||++||...+...       
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~-g~IV~isS~~~~~~~-------  173 (297)
T 1xhl_A          103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI-EMTQKTKEHLIKTK-GEIVNVSSIVAGPQA-------  173 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTT-CEEEEECCGGGSSSC-------
T ss_pred             hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHH-HHHHHHHHHHHhcC-CEEEEEcCchhccCC-------
Confidence            3468999999999754321      22345678999999986 77666643    34 699999999876532       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCCh----HHHHHHHHhcCCceEeecCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLP----IQWIDSVLSKGEKVEFFHDE  211 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  211 (320)
                        ..+...|+.+|...+.+.+.+       +.++.++||+.|.++-..........    ...... +....       .
T Consensus       174 --~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------p  243 (297)
T 1xhl_A          174 --HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGS-RKECI-------P  243 (297)
T ss_dssp             --CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH-CTTTC-------T
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHH-HHhcC-------C
Confidence              023568999999999877653       45788999999987642100000000    001111 11111       1


Q ss_pred             ccCceeHHHHHHHHHHHHhhh-hccccccCceeEecCCCCcCHHHHHHHHHH
Q 020880          212 CRCPVYVRDVVKIILALTNRW-LSEDKQMQLLLNVGGPDRVSRVQMAEVVAE  262 (320)
Q Consensus       212 ~~~~i~v~D~a~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~  262 (320)
                      ...+.+.+|+|++++.++... ..  ...+.++++.+|....+.+.+..+.+
T Consensus       244 ~~r~~~pedvA~~v~~l~s~~~~~--~itG~~i~vdGG~~~~~~~~~~~~~~  293 (297)
T 1xhl_A          244 VGHCGKPEEIANIIVFLADRNLSS--YIIGQSIVADGGSTLVMGMQTHDLMS  293 (297)
T ss_dssp             TSSCBCHHHHHHHHHHHHCHHHHT--TCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred             CCCCcCHHHHHHHHHHHhCCcccC--CccCcEEEECCCccccccccccchhh
Confidence            234789999999999998754 21  12345899998876665555444443

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.90  E-value=4.6e-23  Score=173.02  Aligned_cols=220  Identities=16%  Similarity=0.127  Sum_probs=159.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      .+|+++||||+|+||++++++|+++|   ++|+++.|+++......+.+...+.++.+|++|++++.++++.    ++++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREG---ASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999   8999999997666665555555678899999999988776653    4689


Q ss_pred             CEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhhcc--CceEEEeechhhhcccCCCCcccCCCCCcchH
Q 020880           78 DVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTENK--ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVY  151 (320)
Q Consensus        78 d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~~~--~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y  151 (320)
                      |+|||+||......    ..++++..+++|+.+++ ++++++...-  ..+||++||...++ .          .+...|
T Consensus        82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~g~iv~isS~~~~~-~----------~~~~~Y  149 (263)
T 2a4k_A           82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSF-LVARKAGEVLEEGGSLVLTGSVAGLG-A----------FGLAHY  149 (263)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHH-HHHHHHHHHCCTTCEEEEECCCTTCC-H----------HHHHHH
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHhcCCEEEEEecchhcC-C----------CCcHHH
Confidence            99999999764321    22334677899999986 7877775531  34999999998872 1          125689


Q ss_pred             HHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHH
Q 020880          152 GKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI  224 (320)
Q Consensus       152 ~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  224 (320)
                      +.+|...+.+.+.+       +.++.++||+.+.++....     .......... ...++       ..+.+.+|+|++
T Consensus       150 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~~~~~~~-~~~p~-------~~~~~p~dvA~~  216 (263)
T 2a4k_A          150 AAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG-----LPPWAWEQEV-GASPL-------GRAGRPEEVAQA  216 (263)
T ss_dssp             HHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT-----SCHHHHHHHH-HTSTT-------CSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh-----cCHHHHHHHH-hcCCC-------CCCcCHHHHHHH
Confidence            99999888876653       3567899999998875321     1111222111 22221       246899999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCCCc
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      ++.++.....  ...+..+++.+|...
T Consensus       217 v~~l~s~~~~--~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          217 ALFLLSEESA--YITGQALYVDGGRSI  241 (263)
T ss_dssp             HHHHHSGGGT--TCCSCEEEESTTTTT
T ss_pred             HHHHhCcccc--CCcCCEEEECCCccc
Confidence            9999875422  123558999887544

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.90  E-value=9e-23  Score=170.62  Aligned_cols=214  Identities=12%  Similarity=0.097  Sum_probs=149.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCce-EEEecCCCCC--hhhhhhhC-CCcceEEEeeCCCc-ccHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYD-VAATHHSTPL--PQLLLDAL-PHSFVFFDVDLKSG-SGFDAVAL----   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~-v~~~~r~~~~--~~~~~~~~-~~~~~~~~~Dl~d~-~~~~~~~~----   72 (320)
                      ++|+++||||+|+||++++++|+++|   ++ |+++.|+.+.  ...+.+.. +..+.++.+|++|+ +++.++++    
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G---~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRN---LKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTC---CSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCC---CcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHH
Confidence            46899999999999999999999999   75 8888888642  22232222 23677899999998 77766664    


Q ss_pred             HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhh----cc---CceEEEeechhhhcccCCCCcccCCC
Q 020880           73 KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE----NK---ENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~---~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      .++++|+|||+||...    ..+++..+++|+.+++ ++++++..    .+   ..+||++||...+.+.          
T Consensus        81 ~~g~id~lv~~Ag~~~----~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  145 (254)
T 1sby_A           81 QLKTVDILINGAGILD----DHQIERTIAINFTGLV-NTTTAILDFWDKRKGGPGGIIANICSVTGFNAI----------  145 (254)
T ss_dssp             HHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHH-HHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC----------
T ss_pred             hcCCCCEEEECCccCC----HHHHhhhheeeehhHH-HHHHHHHHHHHHhcCCCCCEEEEECchhhccCC----------
Confidence            3468999999999753    3467889999999986 77777653    21   3489999999887532          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+.+.+       +.++.+++|+.+.++..............+.... ...          .+.++
T Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~----------~~~~~  214 (254)
T 1sby_A          146 HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL-LSH----------PTQTS  214 (254)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH-TTS----------CCEEH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH-hcC----------CCCCH
Confidence            23668999999999977653       4567889999998763211000000000011111 111          23589


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|+|++++.++....     .+.+|++.+|.
T Consensus       215 ~dvA~~i~~~~~~~~-----~G~~~~v~gG~  240 (254)
T 1sby_A          215 EQCGQNFVKAIEANK-----NGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHHHHHHHHCC-----TTCEEEEETTE
T ss_pred             HHHHHHHHHHHHcCC-----CCCEEEEeCCc
Confidence            999999999887432     24489998873

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.90  E-value=4e-23  Score=174.84  Aligned_cols=225  Identities=15%  Similarity=0.174  Sum_probs=158.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh----CCCcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA----LPHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      .+|++|||||+|.||.+++++|+++|   ++|++.+|+.+........    .+..+.++.+|++|+++++++++    .
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHG---CHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999   8999999987654443332    24568889999999998877665    3


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++++|+|||+||.....    .+.++++..+++|+.+++ ++++++.    +.+..+||++||...+...          
T Consensus       103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  171 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTF-NVSRVLYEKFFRDHGGVIVNITATLGNRGQ----------  171 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHTHHHHCEEEEEECCSHHHHTC----------
T ss_pred             cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCCEEEEECchhhCCCC----------
Confidence            46899999999965432    233456778999999996 7777763    3444599999998876432          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+.+.+       +.++.+++|+.|.++........  ......... ...+       ...+.+.
T Consensus       172 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~--~~~~~~~~~-~~~p-------~~r~~~p  241 (277)
T 4fc7_A          172 ALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGG--PQASLSTKV-TASP-------LQRLGNK  241 (277)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSC--CHHHHHHHH-HTST-------TSSCBCH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccC--CHHHHHHHh-ccCC-------CCCCcCH
Confidence            23678999999999977764       34567899999987631000000  001111111 1222       2346889


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      +|+|++++.++.....  -..+.++++.+|..++
T Consensus       242 ~dvA~~v~fL~s~~~~--~itG~~i~vdGG~~~~  273 (277)
T 4fc7_A          242 TEIAHSVLYLASPLAS--YVTGAVLVADGGAWLT  273 (277)
T ss_dssp             HHHHHHHHHHHSGGGT--TCCSCEEEESTTHHHH
T ss_pred             HHHHHHHHHHcCCccC--CcCCCEEEECCCcccC
Confidence            9999999999875332  2235599998875443

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.90  E-value=3.4e-22  Score=166.12  Aligned_cols=217  Identities=14%  Similarity=0.080  Sum_probs=154.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      ++|+++||||+|+||++++++|+++|   ++|+++.|+.++.....+..  .+.++.+|++|++++.++++.    ++++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEG---ARLVACDIEEGPLREAAEAV--GAHPVVMDVADPASVERGFAEALAHLGRL   78 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHTT--TCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHc--CCEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999   89999999876655554443  277889999999988776653    4679


Q ss_pred             CEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||......    ...+++..+++|+.+++ ++++++.    +.+..+||++||...++.           .+..
T Consensus        79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~  146 (245)
T 1uls_A           79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSF-LVAKAASEAMREKNPGSIVLTASRVYLGN-----------LGQA  146 (245)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHH-HHHHHHHHHHTTTCCEEEEEECCGGGGCC-----------TTCH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCEEEEEccchhcCC-----------CCch
Confidence            99999999764321    22345677899999986 7766654    345669999999884432           1356


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...+.+.+.+       +.++.+++|+.+..+-...     .......... ...+.       ..+++.+|+|
T Consensus       147 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~~~~~~~-~~~p~-------~~~~~~~dvA  213 (245)
T 1uls_A          147 NYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-----VPEKVREKAI-AATPL-------GRAGKPLEVA  213 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-----SCHHHHHHHH-HTCTT-------CSCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh-----cCHHHHHHHH-hhCCC-------CCCcCHHHHH
Confidence            8999999999877654       3467889999997764311     1111121111 11111       2368999999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ++++.++.....  ...+..+++.+|..
T Consensus       214 ~~v~~l~s~~~~--~~tG~~~~vdgG~~  239 (245)
T 1uls_A          214 YAALFLLSDESS--FITGQVLFVDGGRT  239 (245)
T ss_dssp             HHHHHHHSGGGT--TCCSCEEEESTTTT
T ss_pred             HHHHHHhCchhc--CCcCCEEEECCCcc
Confidence            999999875422  12355899988753

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.90  E-value=2.5e-22  Score=169.78  Aligned_cols=220  Identities=17%  Similarity=0.082  Sum_probs=154.4

Q ss_pred             CCcEEEEEcCC--ChhhHHHHHHHhhccCCCceEEEecCCCC---ChhhhhhhCCCcceEEEeeCCCcccHHHHHHH---
Q 020880            2 SKKRVLVVGGT--GYLGQHLLQGLSEIEGKPYDVAATHHSTP---LPQLLLDALPHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         2 ~~~~ilItGat--G~IG~~l~~~L~~~g~~v~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      .+|+++||||+  |+||++++++|+++|   ++|++++|+.+   ....+....+ .+.++.+|++|++++.++++.   
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   80 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQG---ATLAFTYLNESLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKK   80 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTT---CEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHHHH
Confidence            36899999999  999999999999999   89999999875   1222222222 367899999999988777653   


Q ss_pred             -hCCCCEEEECCCccCc--------cccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCccc
Q 020880           74 -FGQPDVVVNCAALSVP--------RVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                       ++++|+|||+||....        ..+..+++..+++|+.+++ ++++++...  ...+||++||...+.+.       
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~g~iv~isS~~~~~~~-------  152 (275)
T 2pd4_A           81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLI-ELTNTLKPLLNNGASVLTLSYLGSTKYM-------  152 (275)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHGGGEEEEEEEEEEECGGGTSBC-------
T ss_pred             HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHhccCCEEEEEecchhcCCC-------
Confidence             4579999999997643        2223445678999999996 888887664  12499999998765432       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                         .+...|+.+|...+.+.+.+       +.++.+++|+.|.++..... .  .......... ...++       ..+
T Consensus       153 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~--~~~~~~~~~~-~~~p~-------~~~  218 (275)
T 2pd4_A          153 ---AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI-A--DFRMILKWNE-INAPL-------RKN  218 (275)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS-T--THHHHHHHHH-HHSTT-------SSC
T ss_pred             ---CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc-c--ccHHHHHHHH-hcCCc-------CCC
Confidence               23568999999999977654       45678899999988743211 0  1111222111 11111       235


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .+.+|+|++++.++.....  ...+.++++.++.
T Consensus       219 ~~p~dva~~~~~l~s~~~~--~~tG~~~~vdgg~  250 (275)
T 2pd4_A          219 VSLEEVGNAGMYLLSSLSS--GVSGEVHFVDAGY  250 (275)
T ss_dssp             CCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTG
T ss_pred             CCHHHHHHHHHHHhCcccc--CCCCCEEEECCCc
Confidence            7899999999999865322  1235588888764

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.90  E-value=1.2e-22  Score=173.22  Aligned_cols=223  Identities=16%  Similarity=0.128  Sum_probs=157.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC--hh---hhhhhCCCcceEEEeeCCCcccHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL--PQ---LLLDALPHSFVFFDVDLKSGSGFDAVAL----   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~--~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   72 (320)
                      ++|++|||||+|+||++++++|+++|   ++|++..|+.+.  .+   ......+..+.++.+|++|+++++++++    
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREG---ADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999   889888886331  22   2223345678889999999998877665    


Q ss_pred             HhCCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhhhhccC--ceEEEeechhhhcccCCCCcccCCC
Q 020880           73 KFGQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFTENKE--NLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      .++++|++||+||....     ..+.++++..+++|+.+++ ++++++...-.  .+||++||...+...          
T Consensus       125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~g~Iv~isS~~~~~~~----------  193 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALF-WITQEAIPLLPKGASIITTSSIQAYQPS----------  193 (294)
T ss_dssp             HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHH-HHHHHHGGGCCTTCEEEEECCGGGTSCC----------
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHhhcCCEEEEECChhhccCC----------
Confidence            34789999999997542     1223455788999999996 88888866433  399999999987643          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+.+.+       +.++.+++|+.|.++.........   ..+. .+....       ....+...
T Consensus       194 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~---~~~~-~~~~~~-------p~~r~~~p  262 (294)
T 3r3s_A          194 PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQ---DKIP-QFGQQT-------PMKRAGQP  262 (294)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCG---GGST-TTTTTS-------TTSSCBCG
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCH---HHHH-HHHhcC-------CCCCCcCH
Confidence            23678999999999977654       456788999999875311000000   0000 000111       12347889


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      +|+|++++.++.....  -..+.++++.+|..+
T Consensus       263 ~dvA~~v~~L~s~~~~--~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          263 AELAPVYVYLASQESS--YVTAEVHGVCGGEHL  293 (294)
T ss_dssp             GGGHHHHHHHHSGGGT--TCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHhCcccc--CCCCCEEEECCCccC
Confidence            9999999999876432  123569999988654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.90  E-value=6e-23  Score=170.80  Aligned_cols=221  Identities=13%  Similarity=0.139  Sum_probs=158.9

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQ   76 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~   76 (320)
                      |.+|++|||||+|+||++++++|+++|   ++|++..|+.+........++..+.++.+|++|+++++++++.    +++
T Consensus         4 l~gk~vlVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (247)
T 3rwb_A            4 LAGKTALVTGAAQGIGKAIAARLAADG---ATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGG   80 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            457899999999999999999999999   8999999997776666665566788899999999988777653    468


Q ss_pred             CCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhh----hhhcc-CceEEEeechhhhcccCCCCcccCCCCC
Q 020880           77 PDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSS----FTENK-ENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        77 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~----~~~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +|++||+||.....    .+.++++..+++|+.+++ +++++    +++.+ ..++|++||...+.+.          .+
T Consensus        81 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~  149 (247)
T 3rwb_A           81 IDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTF-IVTRAGTDQMRAAGKAGRVISIASNTFFAGT----------PN  149 (247)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEEECCTHHHHTC----------TT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCCcEEEEECchhhccCC----------CC
Confidence            99999999986432    123345678899999986 77666    44444 4699999998876532          23


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+.+.+       +.++.+++|+.|..+..... .......+.. ..   .       ....+...+|
T Consensus       150 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~-~~---~-------~~~r~~~ped  217 (247)
T 3rwb_A          150 MAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKAS-PHNEAFGFVE-ML---Q-------AMKGKGQPEH  217 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-GGGGGHHHHH-HH---S-------SSCSCBCHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcccccc-ChhHHHHHHh-cc---c-------ccCCCcCHHH
Confidence            678999999999877654       34567899999976532110 0000111111 00   1       1223578999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|+++..++.....  ...+.++++.+|.
T Consensus       218 va~~v~~L~s~~~~--~itG~~i~vdGG~  244 (247)
T 3rwb_A          218 IADVVSFLASDDAR--WITGQTLNVDAGM  244 (247)
T ss_dssp             HHHHHHHHHSGGGT--TCCSCEEEESTTS
T ss_pred             HHHHHHHHhCcccc--CCCCCEEEECCCc
Confidence            99999999876432  1235589998874

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.90  E-value=9.6e-23  Score=168.33  Aligned_cols=192  Identities=14%  Similarity=0.112  Sum_probs=137.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~d   78 (320)
                      +|+||||||+|+||++++++|+++|   ++|+++.|+.+....+.+... ++.++.+|++|++++.++++.    ++++|
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKG---YRVGLMARDEKRLQALAAELE-GALPLPGDVREEGDWARAVAAMEEAFGELS   80 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhh-hceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999   899999998665555544443 577899999999988777653    36899


Q ss_pred             EEEECCCccCccc----cccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchH
Q 020880           79 VVVNCAALSVPRV----CENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVY  151 (320)
Q Consensus        79 ~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y  151 (320)
                      +|||+||......    ...+++..+++|+.+++   ..+++.+++.+.++||++||...+.+.          .+...|
T Consensus        81 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~Y  150 (234)
T 2ehd_A           81 ALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF----------KGGAAY  150 (234)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC----------TTCHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC----------CCCchh
Confidence            9999999754321    22345678899999985   134445556667799999999877532          346789


Q ss_pred             HHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHH
Q 020880          152 GKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI  224 (320)
Q Consensus       152 ~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  224 (320)
                      +.+|...+.+.+.+       +.++.++||+.+..+-...          ..     . .+        .+++.+|+|++
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------~~-----~-~~--------~~~~~~dvA~~  206 (234)
T 2ehd_A          151 NASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN----------TP-----G-QA--------WKLKPEDVAQA  206 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------------------------------CCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc----------cc-----c-cc--------CCCCHHHHHHH
Confidence            99999988876653       3467889999886543210          00     0 00        15789999999


Q ss_pred             HHHHHhhh
Q 020880          225 ILALTNRW  232 (320)
Q Consensus       225 ~~~~~~~~  232 (320)
                      ++.++..+
T Consensus       207 ~~~l~~~~  214 (234)
T 2ehd_A          207 VLFALEMP  214 (234)
T ss_dssp             HHHHHHSC
T ss_pred             HHHHhCCC
Confidence            99998764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=4.1e-23  Score=175.10  Aligned_cols=225  Identities=15%  Similarity=0.145  Sum_probs=156.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CC---cceEEEeeCCCcccHHHHHH---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PH---SFVFFDVDLKSGSGFDAVAL---   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dl~d~~~~~~~~~---   72 (320)
                      ++|++|||||+|+||++++++|+++|   ++|+++.|+.++.....+.+   +.   .+.++.+|++|+++++++++   
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEG---ANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   81 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999   89999999876554433322   22   67889999999998877665   


Q ss_pred             -HhCCCCEEEECCCccCccc--------cccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCC
Q 020880           73 -KFGQPDVVVNCAALSVPRV--------CENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFY  139 (320)
Q Consensus        73 -~~~~~d~Vih~a~~~~~~~--------~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~  139 (320)
                       .++++|+|||+||......        +..+++..+++|+.+++ ++++++..    .+ .+||++||...+...    
T Consensus        82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----  155 (280)
T 1xkq_A           82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI-EMTKKVKPHLVASK-GEIVNVSSIVAGPQA----  155 (280)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHT-CEEEEECCGGGSSSC----
T ss_pred             HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHH-HHHHHHHHHhhcCC-CcEEEecCccccCCC----
Confidence             3468999999999764321        22345678899999986 77777653    33 699999999876532    


Q ss_pred             cccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCC-CCCC---hHHHHHHHHhcCCceEee
Q 020880          140 KEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPV-PKSL---PIQWIDSVLSKGEKVEFF  208 (320)
Q Consensus       140 ~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~  208 (320)
                           ..+...|+.+|...+.+.+.+       +.++.+++|+.+.++...... ....   ....... .....     
T Consensus       156 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----  224 (280)
T 1xkq_A          156 -----QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMAS-HKECI-----  224 (280)
T ss_dssp             -----CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH-CTTTC-----
T ss_pred             -----CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHH-HHcCC-----
Confidence                 124668999999999977764       457789999999887421100 0000   0001111 11111     


Q ss_pred             cCcccCceeHHHHHHHHHHHHhhh-hccccccCceeEecCCCC
Q 020880          209 HDECRCPVYVRDVVKIILALTNRW-LSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       209 ~~~~~~~i~v~D~a~~~~~~~~~~-~~~~~~~~~~~n~~~~~~  250 (320)
                        ....+.+.+|+|++++.++... ..  ...+.++++.+|..
T Consensus       225 --p~~~~~~pedvA~~v~~l~s~~~~~--~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          225 --PIGAAGKPEHIANIILFLADRNLSF--YILGQSIVADGGTS  263 (280)
T ss_dssp             --TTSSCBCHHHHHHHHHHHHCHHHHT--TCCSCEEEESTTGG
T ss_pred             --CCCCCCCHHHHHHHHHHhcCccccc--CccCCeEEECCCcc
Confidence              1234789999999999998654 21  12345899988743

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.90  E-value=3.4e-23  Score=174.21  Aligned_cols=223  Identities=14%  Similarity=0.083  Sum_probs=157.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh----CCCcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA----LPHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++..|+.++.....+.    .+..+.++.+|++|+++++++++    .
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAG---ARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999999   8999999987665443332    34578889999999998877665    3


Q ss_pred             hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhh----cc-CceEEEeechhhhcccCCCCcccCC
Q 020880           74 FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTE----NK-ENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~----~~-~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      ++++|++||+||......    ..++++..+++|+.+++ ++++++..    .+ ..+||++||...+.+.         
T Consensus        96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  165 (266)
T 4egf_A           96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPA-LLASAVGKAMVAAGEGGAIITVASAAALAPL---------  165 (266)
T ss_dssp             HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCeEEEEEcchhhccCC---------
Confidence            468999999999865421    22345678899999986 77766643    22 3499999999887532         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       .+...|+.+|...+.+.+.+       +.++..++|+.|..+........   ...... +....+       ...+.+
T Consensus       166 -~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~-~~~~~p-------~~r~~~  233 (266)
T 4egf_A          166 -PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGD---EAKSAP-MIARIP-------LGRFAV  233 (266)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCS---HHHHHH-HHTTCT-------TSSCBC
T ss_pred             -CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccC---hHHHHH-HHhcCC-------CCCCcC
Confidence             24678999999999877654       34567899999976532100000   011111 112222       234688


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      .+|+|+++++++.....  ...+.++++.+|...
T Consensus       234 p~dva~~v~~L~s~~~~--~itG~~i~vdGG~~~  265 (266)
T 4egf_A          234 PHEVSDAVVWLASDAAS--MINGVDIPVDGGYTM  265 (266)
T ss_dssp             HHHHHHHHHHHHSGGGT--TCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHhCchhc--CccCcEEEECCCccC
Confidence            99999999999876432  123559999887543

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.90  E-value=1e-22  Score=166.91  Aligned_cols=205  Identities=13%  Similarity=0.005  Sum_probs=149.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|++|||||+|+||++++++|+++|   ++|++..|+.+                 +|++|+++++++++.++++|++||
T Consensus         6 ~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~-----------------~D~~~~~~v~~~~~~~g~id~lv~   65 (223)
T 3uce_A            6 KTVYVVLGGTSGIGAELAKQLESEH---TIVHVASRQTG-----------------LDISDEKSVYHYFETIGAFDHLIV   65 (223)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHCSTT---EEEEEESGGGT-----------------CCTTCHHHHHHHHHHHCSEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEecCCcc-----------------cCCCCHHHHHHHHHHhCCCCEEEE
Confidence            5789999999999999999999999   89999988742                 899999999999998889999999


Q ss_pred             CCCccCc-----cccccCchhhhhccccccHHHHHhhhhhcc--CceEEEeechhhhcccCCCCcccCCCCCcchHHHHH
Q 020880           83 CAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFTENK--ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSK  155 (320)
Q Consensus        83 ~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~--~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK  155 (320)
                      +||....     +.+.++++..+++|+.+++ ++++++...-  -.++|++||...+.+.          .+...|+.+|
T Consensus        66 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------~~~~~Y~asK  134 (223)
T 3uce_A           66 TAGSYAPAGKVVDVEVTQAKYAFDTKFWGAV-LAAKHGARYLKQGGSITLTSGMLSRKVV----------ANTYVKAAIN  134 (223)
T ss_dssp             CCCCCCCCSCTTTSCHHHHHHHHHHHHHHHH-HHHHHHGGGEEEEEEEEEECCGGGTSCC----------TTCHHHHHHH
T ss_pred             CCCCCCCCCCcccCCHHHHHhhheeeeeeHH-HHHHHHHhhccCCeEEEEecchhhccCC----------CCchHHHHHH
Confidence            9997632     1223445677899999996 8888876542  2389999999877532          2467899999


Q ss_pred             HHHHHHHHHHc-----CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHh
Q 020880          156 VAAEKFIYEKC-----SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN  230 (320)
Q Consensus       156 ~~~e~~~~~~~-----~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  230 (320)
                      ...+.+.+.+.     .++..++|+.+..+-.... .......+... .....+       ...+.+++|+|++++.++.
T Consensus       135 ~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~-~~~~~~-------~~~~~~~~dvA~~~~~l~~  205 (223)
T 3uce_A          135 AAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGM-NADDRDAMYQR-TQSHLP-------VGKVGEASDIAMAYLFAIQ  205 (223)
T ss_dssp             HHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTS-CHHHHHHHHHH-HHHHST-------TCSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhc-chhhHHHHHHH-HhhcCC-------CCCccCHHHHHHHHHHHcc
Confidence            99999777643     3566799999987643211 10001111111 111112       2347899999999999987


Q ss_pred             hhhccccccCceeEecCCCCc
Q 020880          231 RWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       231 ~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      ...    ..+.++++.+|..+
T Consensus       206 ~~~----~tG~~i~vdgG~~~  222 (223)
T 3uce_A          206 NSY----MTGTVIDVDGGALL  222 (223)
T ss_dssp             CTT----CCSCEEEESTTGGG
T ss_pred             CCC----CCCcEEEecCCeec
Confidence            533    23559999987654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.90  E-value=6.8e-23  Score=177.14  Aligned_cols=233  Identities=15%  Similarity=0.154  Sum_probs=164.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC----------CCChhhhhhh---CCCcceEEEeeCCCcccHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS----------TPLPQLLLDA---LPHSFVFFDVDLKSGSGFDA   69 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~----------~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~   69 (320)
                      +|++|||||+|+||.+++++|+++|   ++|++.+|+          .+......+.   .+..+.++.+|++|++++.+
T Consensus        27 gk~vlVTGas~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           27 GRVVIVTGAGGGIGRAHALAFAAEG---ARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            5799999999999999999999999   899999887          3333333322   24567789999999998777


Q ss_pred             HHH----HhCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhcc----------CceEEEeechhh
Q 020880           70 VAL----KFGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTENK----------ENLLIHLSTDQV  131 (320)
Q Consensus        70 ~~~----~~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~~----------~~~~v~~Ss~~v  131 (320)
                      +++    .++++|+|||+||.....    .+..+++..+++|+.+++ ++++++...-          -.+||++||...
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  182 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHF-ATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG  182 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence            665    346899999999986542    223455678999999986 7777664321          138999999887


Q ss_pred             hcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCc
Q 020880          132 YEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEK  204 (320)
Q Consensus       132 y~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  204 (320)
                      +.+.          .+...|+.||...+.+.+.+       +.++.+++|+ +..+-.......     ...        
T Consensus       183 ~~~~----------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~-----~~~--------  238 (322)
T 3qlj_A          183 LQGS----------VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE-----MMA--------  238 (322)
T ss_dssp             HHCB----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC----------------
T ss_pred             ccCC----------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh-----hhh--------
Confidence            6432          23668999999999987764       3356779998 644322111110     000        


Q ss_pred             eEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCc-----------------CHHHHHHHHHHHhCCC
Q 020880          205 VEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV-----------------SRVQMAEVVAEIRGYS  267 (320)
Q Consensus       205 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~-----------------s~~e~~~~i~~~~~~~  267 (320)
                         .......++..+|+|++++.++.....  ...+.++++.+|...                 ++.|+++.+.+.++.+
T Consensus       239 ---~~~~~~~~~~pedva~~v~~L~s~~~~--~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~  313 (322)
T 3qlj_A          239 ---TQDQDFDAMAPENVSPLVVWLGSAEAR--DVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA  313 (322)
T ss_dssp             --------CCTTCGGGTHHHHHHHTSGGGG--GCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred             ---ccccccCCCCHHHHHHHHHHHhCcccc--CCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence               001123467899999999999865432  123558999887644                 7799999999998855


Q ss_pred             C
Q 020880          268 T  268 (320)
Q Consensus       268 ~  268 (320)
                      .
T Consensus       314 ~  314 (322)
T 3qlj_A          314 R  314 (322)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.90  E-value=8.5e-23  Score=170.64  Aligned_cols=226  Identities=15%  Similarity=0.138  Sum_probs=156.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~d   78 (320)
                      +|++|||||+|+||++++++|+++|.. +.|+...|+.+....+.+.++..+.++.+|++|+++++++++.    ++++|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   80 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKD-TVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKID   80 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSS-CEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCC-eEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCcc
Confidence            589999999999999999999998633 7888889987766666555556788899999999988777653    46899


Q ss_pred             EEEECCCccCc-----cccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           79 VVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        79 ~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      ++||+||...+     ..+.++++..+++|+.+++ ++++++    ++.+ .++|++||...+.+.          .+..
T Consensus        81 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~m~~~~-g~iv~isS~~~~~~~----------~~~~  148 (254)
T 3kzv_A           81 SLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIV-SLVGIALPELKKTN-GNVVFVSSDACNMYF----------SSWG  148 (254)
T ss_dssp             EEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHT-CEEEEECCSCCCCSS----------CCSH
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcC-CeEEEEcCchhccCC----------CCcc
Confidence            99999998543     1223445678999999996 777776    4444 599999998876432          2467


Q ss_pred             hHHHHHHHHHHHHHHH-----cCCeeEEeecccccCCCCCCCCC----CChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          150 VYGKSKVAAEKFIYEK-----CSNFAILRSSIIYGPQTISPVPK----SLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-----~~~~~ilR~~~v~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      .|+.||...+.+.+.+     +.++..++|+.+..+-.......    ......... +....+       ...+.+.+|
T Consensus       149 ~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~r~~~p~d  220 (254)
T 3kzv_A          149 AYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKM-FRGLKE-------NNQLLDSSV  220 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHH-HHHHHT-------TC----CHH
T ss_pred             hHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHH-HHHHHh-------cCCcCCccc
Confidence            9999999999988764     34667899999987754221110    011111111 111111       224688999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +|++++.++....+ .-..+..+++.+++.
T Consensus       221 va~~v~~L~s~~~~-~~itG~~i~vdg~~~  249 (254)
T 3kzv_A          221 PATVYAKLALHGIP-DGVNGQYLSYNDPAL  249 (254)
T ss_dssp             HHHHHHHHHHHCCC-GGGTTCEEETTCGGG
T ss_pred             HHHHHHHHHhhccc-CCCCccEEEecCccc
Confidence            99999999876421 112355888877653

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=6.7e-23  Score=172.76  Aligned_cols=229  Identities=17%  Similarity=0.119  Sum_probs=157.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      ++|++|||||+|+||++++++|+++|   ++|++..|+++....+.+... .+.++.+|++|++++.++++    .++++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSG---ARVVICDKDESGGRALEQELP-GAVFILCDVTQEDDVKTLVSETIRRFGRL   83 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCT-TEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhc-CCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            35799999999999999999999999   899999998766555544443 47789999999998877665    34689


Q ss_pred             CEEEECCCccCcc-----ccccCchhhhhccccccHHHHHhhhhh---ccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLSSFTE---NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||.....     ...++++..+++|+.+++ ++++++..   .+..++|++||...+.+.          .+..
T Consensus        84 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  152 (270)
T 1yde_A           84 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTY-TLTKLALPYLRKSQGNVINISSLVGAIGQ----------AQAV  152 (270)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEECCHHHHHCC----------TTCH
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHCCCEEEEEcCccccCCC----------CCCc
Confidence            9999999975421     122335678899999996 77777753   223599999998754321          1356


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCC-CCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPV-PKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      .|+.+|...+.+.+.+       +.++.++||+.++++...... ........+.... ...+       ...+...+|+
T Consensus       153 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~p-------~~r~~~p~dv  224 (270)
T 1yde_A          153 PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGM-LAQP-------LGRMGQPAEV  224 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHH-HTST-------TSSCBCHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHh-hcCC-------CCCCcCHHHH
Confidence            8999999999987764       457789999999886321000 0000001111111 1111       1236789999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCCCCcCHHHH
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQM  256 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~  256 (320)
                      |++++.++.. .  ....+..+++.+|....+...
T Consensus       225 a~~v~~L~s~-~--~~itG~~i~vdGG~~~~~~~~  256 (270)
T 1yde_A          225 GAAAVFLASE-A--NFCTGIELLVTGGAELGYGCK  256 (270)
T ss_dssp             HHHHHHHHHH-C--TTCCSCEEEESTTTTSCC---
T ss_pred             HHHHHHHccc-C--CCcCCCEEEECCCeecccCcC
Confidence            9999988875 2  122355899999876654433

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.89  E-value=8.4e-23  Score=171.65  Aligned_cols=203  Identities=16%  Similarity=0.132  Sum_probs=145.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~d   78 (320)
                      +|++|||||+|+||++++++|+++|   ++|++++|+.+..+...   ...+.++.+|++|.+++.++++    .++++|
T Consensus        16 ~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   89 (266)
T 3p19_A           16 KKLVVITGASSGIGEAIARRFSEEG---HPLLLLARRVERLKALN---LPNTLCAQVDVTDKYTFDTAITRAEKIYGPAD   89 (266)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCHHHHHTTC---CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHhh---cCCceEEEecCCCHHHHHHHHHHHHHHCCCCC
Confidence            5789999999999999999999999   88999999855443322   2367789999999998877665    346899


Q ss_pred             EEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           79 VVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        79 ~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      +|||+||......    ...+++..+++|+.+++ ++++++    ++.+..+||++||...+...          .+...
T Consensus        90 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~~~~~~~g~IV~isS~~~~~~~----------~~~~~  158 (266)
T 3p19_A           90 AIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLL-NGMQAVLAPMKARNCGTIINISSIAGKKTF----------PDHAA  158 (266)
T ss_dssp             EEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEECCGGGTSCC----------TTCHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCcEEEEEcChhhCCCC----------CCCch
Confidence            9999999864321    22345677899999986 755554    45566799999999877532          23678


Q ss_pred             HHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHH
Q 020880          151 YGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK  223 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  223 (320)
                      |+.+|...+.+.+.+       +.++.+++||.|..+-......    .... ...... ..     ....+++++|+|+
T Consensus       159 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----~~~~-~~~~~~-~~-----~~~r~~~pedvA~  227 (266)
T 3p19_A          159 YCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTS----QQIK-DGYDAW-RV-----DMGGVLAADDVAR  227 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSC----HHHH-HHHHHH-HH-----HTTCCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccc----hhhh-HHHHhh-cc-----cccCCCCHHHHHH
Confidence            999999999877654       3567889999998764321111    1111 111000 00     1234789999999


Q ss_pred             HHHHHHhhhh
Q 020880          224 IILALTNRWL  233 (320)
Q Consensus       224 ~~~~~~~~~~  233 (320)
                      +++.++..+.
T Consensus       228 av~~l~~~~~  237 (266)
T 3p19_A          228 AVLFAYQQPQ  237 (266)
T ss_dssp             HHHHHHHSCT
T ss_pred             HHHHHHcCCC
Confidence            9999998853

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.89  E-value=2.4e-22  Score=168.40  Aligned_cols=224  Identities=18%  Similarity=0.181  Sum_probs=155.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC--hhhhhhh---CCCcceEEEeeCCCcccHHHHHH----H
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL--PQLLLDA---LPHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~--~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      +|++|||||+|+||++++++|+++|   ++|++..|+.+.  .....+.   .+..+.++.+|++|++++.++++    .
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADG---FDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEK   78 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999   899999998665  3333222   24567889999999998877665    3


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh----ccC-ceEEEeechhhhcccCCCCcccCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE----NKE-NLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      ++++|+|||+||.....    .+..+++..+++|+.+++ ++++++..    .+. .+||++||...+.+.         
T Consensus        79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  148 (258)
T 3a28_C           79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVF-FGIQAASRKFDELGVKGKIINAASIAAIQGF---------  148 (258)
T ss_dssp             HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCCEEEEECCGGGTSCC---------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHH-HHHHHHHHHHHhcCCCcEEEEECcchhccCC---------
Confidence            46899999999976432    123345678999999986 77776654    355 699999999876432         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCC-------CCCChHHHHHHHHhcCCceEeecC
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPV-------PKSLPIQWIDSVLSKGEKVEFFHD  210 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~  210 (320)
                       .+...|+.+|...+.+.+.+       +.++.+++|+.+..+-.....       .... ...... +....       
T Consensus       149 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~-------  218 (258)
T 3a28_C          149 -PILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPI-GENFKE-YSSSI-------  218 (258)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCT-THHHHH-HHTTC-------
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCch-HHHHHH-HHhcC-------
Confidence             23668999999999877754       356788999998654210000       0000 000111 11111       


Q ss_pred             cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      ....+.+.+|+|++++.++.....  ...+.++++.+|...
T Consensus       219 p~~r~~~p~dvA~~v~~l~s~~~~--~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          219 ALGRPSVPEDVAGLVSFLASENSN--YVTGQVMLVDGGMLY  257 (258)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESSSSCC
T ss_pred             CCCCccCHHHHHHHHHHHhCcccC--CCCCCEEEECCCEec
Confidence            123478999999999999875421  123558999887543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.89  E-value=8.2e-23  Score=172.26  Aligned_cols=223  Identities=18%  Similarity=0.204  Sum_probs=154.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-Chhhhh---hhCCCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-LPQLLL---DALPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      ++|+++||||+|+||++++++|+++|   ++|++..|+.. ......   ...+.++.++.+|++|+++++++++.    
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAG---MAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD  100 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999   88888875433 222222   22245788899999999988776653    


Q ss_pred             hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++++|+|||+||......    ...+++..+++|+.+++ ++++++.    +.+..+||++||...+.+.          
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  169 (269)
T 3gk3_A          101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMF-NVTKQFIAGMVERRFGRIVNIGSVNGSRGA----------  169 (269)
T ss_dssp             HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------
T ss_pred             cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCEEEEeCChhhccCC----------
Confidence            468999999999864422    23345678899999986 7766654    3455699999998876432          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+.+.+       +.++.+++|+.|..+.....     .........       ........+.+.
T Consensus       170 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-----~~~~~~~~~-------~~~~~~~~~~~p  237 (269)
T 3gk3_A          170 FGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV-----PQDVLEAKI-------LPQIPVGRLGRP  237 (269)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------CCS-------GGGCTTSSCBCH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh-----chhHHHHHh-------hhcCCcCCccCH
Confidence            24678999999998877654       34567899999977643211     000100000       001123457889


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      +|+|++++.++.....  ...+.++++.+|..+|
T Consensus       238 ~dvA~~v~~L~s~~~~--~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          238 DEVAALIAFLCSDDAG--FVTGADLAINGGMHMS  269 (269)
T ss_dssp             HHHHHHHHHHTSTTCT--TCCSCEEEESTTSCCC
T ss_pred             HHHHHHHHHHhCCCcC--CeeCcEEEECCCEeCc
Confidence            9999999999876422  2235699999886553

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.89  E-value=2.2e-22  Score=168.42  Aligned_cols=224  Identities=17%  Similarity=0.084  Sum_probs=152.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHH----HhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVAL----KFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----~~~   75 (320)
                      +|++|||||+|+||++++++|+++|   ++|++..|+++......+.   .+..+.++.+|++|++++.++++    .++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDG---FAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLG   78 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999   8999999986554443322   23467889999999998877765    346


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hcc-CceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENK-ENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|+|||+||.....    ....+++..+++|+.+++ ++++++.    +.+ ..+||++||...+.+.          .
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  147 (256)
T 1geg_A           79 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVI-WGIQAAVEAFKKEGHGGKIINACSQAGHVGN----------P  147 (256)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------T
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCCEEEEECchhhcCCC----------C
Confidence            899999999975432    122345678899999985 6655554    334 4699999998765422          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCC---C---CChHHHHHHHHhcCCceEeecCccc
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVP---K---SLPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                      +...|+.+|...+.+.+.+       +.++.+++|+.+.++.......   .   ....... ..+....       ...
T Consensus       148 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------p~~  219 (256)
T 1geg_A          148 ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGT-AEFAKRI-------TLG  219 (256)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHH-HHHHTTC-------TTC
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHH-HHHHhcC-------CCC
Confidence            3568999999999887764       3467889999998753100000   0   0000000 0011111       123


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      .+.+.+|+|++++.++.....  ...+.++++.+|..
T Consensus       220 r~~~p~dvA~~v~~l~s~~~~--~~tG~~i~vdGG~~  254 (256)
T 1geg_A          220 RLSEPEDVAACVSYLASPDSD--YMTGQSLLIDGGMV  254 (256)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESSSSS
T ss_pred             CCcCHHHHHHHHHHHhCcccc--CCCCCEEEeCCCcc
Confidence            478999999999999875421  12355899988753

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.89  E-value=2.8e-22  Score=167.94  Aligned_cols=223  Identities=14%  Similarity=0.097  Sum_probs=149.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC-CCChhhhh---hhCCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLL---DALPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~-~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      +|++|||||+|+||++++++|+++|   ++|++..++ .+......   ...+..+.++.+|++|++++.++++.    +
T Consensus         8 ~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            8 NRTIVVAGAGRDIGRACAIRFAQEG---ANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            5799999999999999999999999   888888454 33333222   22345688899999999988777653    4


Q ss_pred             CCCCEEEECCCccCcc-----ccccCchhhhhccccccHHHHHhhhhhccC--ceEEEeechhhh-cccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLSSFTENKE--NLLIHLSTDQVY-EGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~--~~~v~~Ss~~vy-~~~~~~~~E~~~~~  146 (320)
                      +++|++||+||.....     .+.++++..+++|+.+++ ++++++...-.  .++|++||...+ ...          .
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~  153 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLF-LTAKTALPKMAKGGAIVTFSSQAGRDGGG----------P  153 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHH-HHHHHHGGGEEEEEEEEEECCHHHHHCCS----------T
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCEEEEEcCHHhccCCC----------C
Confidence            6899999999875221     122334678899999996 88888866432  389999999877 322          2


Q ss_pred             CcchHHHHHHHHHHHHHHH----c--CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK----C--SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~----~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      +...|+.+|...+.+.+.+    +  .++..++|+.|..+-......     ......+....       ....+.+++|
T Consensus       154 ~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~-----~~~~~~~~~~~-------p~~r~~~ped  221 (259)
T 3edm_A          154 GALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK-----PEVRERVAGAT-------SLKREGSSED  221 (259)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------------------CCBCHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC-----hHHHHHHHhcC-------CCCCCcCHHH
Confidence            4678999999999977754    3  345679999887653211100     00001111111       1234788999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCcCH
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR  253 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~  253 (320)
                      +|++++.++.....  ...+.+|++.+|...+.
T Consensus       222 va~~v~~L~s~~~~--~itG~~i~vdGg~~~~~  252 (259)
T 3edm_A          222 VAGLVAFLASDDAA--YVTGACYDINGGVLFSE  252 (259)
T ss_dssp             HHHHHHHHHSGGGT--TCCSCEEEESBCSSBC-
T ss_pred             HHHHHHHHcCcccc--CccCCEEEECCCcCCCC
Confidence            99999999876432  12355999988865543

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.89  E-value=3.7e-23  Score=170.70  Aligned_cols=195  Identities=19%  Similarity=0.123  Sum_probs=142.5

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQ   76 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~   76 (320)
                      |++|++|||||+|+||++++++|+++|   ++|++.+|+.+..+...+..+..+.++.+|++|+++++++++.    +++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   77 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERG---HQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGL   77 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            788999999999999999999999999   8999999997766655554444688899999999988776653    468


Q ss_pred             CCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           77 PDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        77 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      +|++||+||.....    .+.++++..+++|+.+++ .+++++.    +.+. ++|++||...+.+.          .+.
T Consensus        78 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~-~iv~isS~~~~~~~----------~~~  145 (235)
T 3l6e_A           78 PELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTI-LVAQQTVRLIGERGG-VLANVLSSAAQVGK----------ANE  145 (235)
T ss_dssp             CSEEEEECCCC------CCCHHHHHHHHHHHHHHHH-HHHHHHHHHHTTTCE-EEEEECCEECCSSC----------SSH
T ss_pred             CcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCC-EEEEEeCHHhcCCC----------CCC
Confidence            99999999985432    233456788999999986 7777663    3333 99999998765432          235


Q ss_pred             chHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          149 NVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      ..|+.||...+.+.+.+.       .++..++||.|-.+-...          ..     ..+       ...++..+|+
T Consensus       146 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~----------~~-----~~~-------~~~~~~pedv  203 (235)
T 3l6e_A          146 SLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN----------TD-----HVD-------PSGFMTPEDA  203 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------------------CBCHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc----------cC-----CCC-------CcCCCCHHHH
Confidence            689999999999887642       356779999885542110          00     000       1146899999


Q ss_pred             HHHHHHHHhhh
Q 020880          222 VKIILALTNRW  232 (320)
Q Consensus       222 a~~~~~~~~~~  232 (320)
                      |++++.++..+
T Consensus       204 A~~v~~l~~~~  214 (235)
T 3l6e_A          204 AAYMLDALEAR  214 (235)
T ss_dssp             HHHHHHHTCCC
T ss_pred             HHHHHHHHhCC
Confidence            99999999764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.89  E-value=4.2e-22  Score=164.94  Aligned_cols=216  Identities=13%  Similarity=0.153  Sum_probs=151.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~d   78 (320)
                      +|+++||||+|+||++++++|+++|   ++|+++.|++++..   +..  .+.++.+|++| +++.++++    .++++|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G---~~V~~~~r~~~~~~---~~~--~~~~~~~D~~~-~~~~~~~~~~~~~~g~id   72 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARG---YRVAIASRNPEEAA---QSL--GAVPLPTDLEK-DDPKGLVKRALEALGGLH   72 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCHHHH---HHH--TCEEEECCTTT-SCHHHHHHHHHHHHTSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHH---Hhh--CcEEEecCCch-HHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999   89999999865422   222  26778999999 87766554    456899


Q ss_pred             EEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           79 VVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        79 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      +|||+||.....    .+.++++..+++|+.+++ ++++++    ++.+..++|++||...+....        ..+...
T Consensus        73 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------~~~~~~  143 (239)
T 2ekp_A           73 VLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAF-LLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG--------PVPIPA  143 (239)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------TSCCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCcEEEEECchhhccCCC--------CCCCcc
Confidence            999999975432    123345678899999986 666666    345667999999998875431        134678


Q ss_pred             HHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHH
Q 020880          151 YGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK  223 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  223 (320)
                      |+.+|...+.+.+.+       +.++.++||+.+.++.......   ...+... +....+       ...+.+.+|+|+
T Consensus       144 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~-~~~~~p-------~~~~~~~~dvA~  212 (239)
T 2ekp_A          144 YTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQ---NPELYEP-ITARIP-------MGRWARPEEIAR  212 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT---CHHHHHH-HHTTCT-------TSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcccc---CHHHHHH-HHhcCC-------CCCCcCHHHHHH
Confidence            999999999877654       3467889999998764210000   0011111 111111       224789999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCCC
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +++.++.....  ...+..+++.+|.
T Consensus       213 ~~~~l~s~~~~--~~tG~~~~vdgG~  236 (239)
T 2ekp_A          213 VAAVLCGDEAE--YLTGQAVAVDGGF  236 (239)
T ss_dssp             HHHHHTSGGGT--TCCSCEEEESTTT
T ss_pred             HHHHHcCchhc--CCCCCEEEECCCc
Confidence            99999865322  1235588888764

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.89  E-value=2.4e-22  Score=167.41  Aligned_cols=214  Identities=14%  Similarity=0.089  Sum_probs=150.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+||||||+|+||++++++|+++|   ++|++++|+++...    ..+ .+.++ +|+  .++++++++.+.++|+||
T Consensus        18 ~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~----~~~-~~~~~-~D~--~~~~~~~~~~~~~iD~lv   86 (249)
T 1o5i_A           18 RDKGVLVLAASRGIGRAVADVLSQEG---AEVTICARNEELLK----RSG-HRYVV-CDL--RKDLDLLFEKVKEVDILV   86 (249)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHH----HTC-SEEEE-CCT--TTCHHHHHHHSCCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCHHHHH----hhC-CeEEE-eeH--HHHHHHHHHHhcCCCEEE
Confidence            47899999999999999999999999   89999999863222    222 45556 999  567888888776899999


Q ss_pred             ECCCccCccc----cccCchhhhhccccccH---HHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHH
Q 020880           82 NCAALSVPRV----CENDPDSAMSINVPSSL---VNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKS  154 (320)
Q Consensus        82 h~a~~~~~~~----~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~s  154 (320)
                      |+||......    ...+++..+++|+.+++   ..+++.+++.+..+||++||...+.+.          .+...|+.+
T Consensus        87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~Y~~s  156 (249)
T 1o5i_A           87 LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI----------ENLYTSNSA  156 (249)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TTBHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC----------CCCchHHHH
Confidence            9999764321    22345677899999875   134555556666799999999987542          246789999


Q ss_pred             HHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHH
Q 020880          155 KVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA  227 (320)
Q Consensus       155 K~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  227 (320)
                      |...+.+.+.+       +.++.++||+.+.++..... ..    ......+....+       ...+++++|+|++++.
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~----~~~~~~~~~~~p-------~~~~~~~~dvA~~i~~  224 (249)
T 1o5i_A          157 RMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKEL-LS----EEKKKQVESQIP-------MRRMAKPEEIASVVAF  224 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHH-SC----HHHHHHHHTTST-------TSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCccccc-ch----hhHHHHHHhcCC-------CCCCcCHHHHHHHHHH
Confidence            99999877654       34678899999988753100 00    111101111211       2357899999999999


Q ss_pred             HHhhhhccccccCceeEecCCCC
Q 020880          228 LTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       228 ~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ++.....  ...+.+|++.+|..
T Consensus       225 l~s~~~~--~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          225 LCSEKAS--YLTGQTIVVDGGLS  245 (249)
T ss_dssp             HHSGGGT--TCCSCEEEESTTCC
T ss_pred             HcCcccc--CCCCCEEEECCCcc
Confidence            9875322  12355899988753

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.89  E-value=5.2e-22  Score=167.09  Aligned_cols=221  Identities=12%  Similarity=0.026  Sum_probs=155.7

Q ss_pred             CcEEEEEcCCCh--hhHHHHHHHhhccCCCceEEEecCCCCChhh---hhhhCCC-cceEEEeeCCCcccHHHHHHH---
Q 020880            3 KKRVLVVGGTGY--LGQHLLQGLSEIEGKPYDVAATHHSTPLPQL---LLDALPH-SFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         3 ~~~ilItGatG~--IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~---~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      +|++|||||+|+  ||++++++|+++|   ++|++..|+....+.   +....+. .+.++.+|++|+++++++++.   
T Consensus         7 ~k~vlVTGasg~~GIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            7 GRNIVVMGVANKRSIAWGIARSLHEAG---ARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHCC---CEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            579999999999  9999999999999   889999888543322   2233333 688899999999998877754   


Q ss_pred             -hCCCCEEEECCCccCc--------cccccCchhhhhccccccHHHHHhhhhhcc--CceEEEeechhhhcccCCCCccc
Q 020880           74 -FGQPDVVVNCAALSVP--------RVCENDPDSAMSINVPSSLVNWLSSFTENK--ENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~--~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                       ++++|++||+||....        ..+..++...+++|+.+++ ++++++...-  ..+||++||...+.+.       
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~g~iv~isS~~~~~~~-------  155 (266)
T 3oig_A           84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLT-AVVKAARPMMTEGGSIVTLTYLGGELVM-------  155 (266)
T ss_dssp             HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHGGGCTTCEEEEEEECGGGTSCC-------
T ss_pred             HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHH-HHHHHHHhhcCCCceEEEEecccccccC-------
Confidence             3689999999998642        1122344677899999986 8888776542  2389999998876432       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                         .+...|+.||...+.+.+.+       +.++.+++|+.|..+......   .......... ...+       ...+
T Consensus       156 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~-~~~~-------~~~~  221 (266)
T 3oig_A          156 ---PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS---DFNSILKDIE-ERAP-------LRRT  221 (266)
T ss_dssp             ---TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT---THHHHHHHHH-HHST-------TSSC
T ss_pred             ---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc---chHHHHHHHH-hcCC-------CCCC
Confidence               23668999999999977764       245678999999875432111   1111222211 1111       1246


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      .+.+|+|++++.++.....  ...+.++++.+|..
T Consensus       222 ~~p~dva~~v~~l~s~~~~--~~tG~~i~vdGG~~  254 (266)
T 3oig_A          222 TTPEEVGDTAAFLFSDMSR--GITGENLHVDSGFH  254 (266)
T ss_dssp             CCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTGG
T ss_pred             CCHHHHHHHHHHHcCCchh--cCcCCEEEECCCeE
Confidence            8899999999999976432  22356999988754

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.89  E-value=4.3e-22  Score=167.65  Aligned_cols=217  Identities=14%  Similarity=0.092  Sum_probs=153.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEec-CCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~-r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      ++|+||||||+|+||++++++|+++|   ++|+... |+.+......+   ..+.++.++.+|++|++++.++++    .
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G---~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADG---FNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ  101 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            45799999999999999999999999   7886655 44333333222   224578889999999998877665    3


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh-----hccCceEEEeechhhhcccCCCCcccCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT-----ENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~-----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      ++++|+|||+||.....    .+..+++..+++|+.+++ ++++++.     +.+..+||++||...+.+.         
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  171 (267)
T 4iiu_A          102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFY-NVIQPCIMPMIGARQGGRIITLSSVSGVMGN---------  171 (267)
T ss_dssp             HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTSCEEEEEECCHHHHHCC---------
T ss_pred             hCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCcEEEEEcchHhccCC---------
Confidence            46899999999986542    233456778899999986 7777763     4455699999998876432         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       .+...|+.+|...+.+.+.+       +.++.+++|+.|..+....     . ........ ...+.       ..+.+
T Consensus       172 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~-~~~~~~~~-~~~p~-------~~~~~  236 (267)
T 4iiu_A          172 -RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEM-----E-ESALKEAM-SMIPM-------KRMGQ  236 (267)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCC-----C-HHHHHHHH-HTCTT-------CSCBC
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccc-----c-HHHHHHHH-hcCCC-------CCCcC
Confidence             24678999999888766553       3456789999998765421     1 12222222 22222       24688


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ++|+|++++.++.....  ...+.++++.+|
T Consensus       237 ~edva~~~~~L~s~~~~--~itG~~i~vdGG  265 (267)
T 4iiu_A          237 AEEVAGLASYLMSDIAG--YVTRQVISINGG  265 (267)
T ss_dssp             HHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCCccc--CccCCEEEeCCC
Confidence            99999999999876432  123558999876

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.89  E-value=3.1e-22  Score=169.67  Aligned_cols=221  Identities=12%  Similarity=0.057  Sum_probs=157.2

Q ss_pred             CCcEEEEEcCCCh--hhHHHHHHHhhccCCCceEEEecCCC--CChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh---
Q 020880            2 SKKRVLVVGGTGY--LGQHLLQGLSEIEGKPYDVAATHHST--PLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         2 ~~~~ilItGatG~--IG~~l~~~L~~~g~~v~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      ++|+||||||+|+  ||.+++++|+++|   ++|++.+|+.  +..+.+.... ..+.++.+|++|.+++.++++.+   
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREG---AELAFTYVGQFKDRVEKLCAEF-NPAAVLPCDVISDQEIKDLFVELGKV  100 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTT---CEEEEEECTTCHHHHHHHHGGG-CCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcC---CEEEEeeCchHHHHHHHHHHhc-CCceEEEeecCCHHHHHHHHHHHHHH
Confidence            3689999999988  9999999999999   8999999987  2233333333 35788999999999988877643   


Q ss_pred             -CCCCEEEECCCccCcc---------ccccCchhhhhccccccHHHHHhhhhhc---cCceEEEeechhhhcccCCCCcc
Q 020880           75 -GQPDVVVNCAALSVPR---------VCENDPDSAMSINVPSSLVNWLSSFTEN---KENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        75 -~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~n~~~~~~~~l~~~~~~---~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                       +++|+|||+||.....         ....+++..+++|+.+++ ++++++...   +..+||++||.+.+.+.      
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~g~iv~isS~~~~~~~------  173 (280)
T 3nrc_A          101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFA-ALAKEGRSMMKNRNASMVALTYIGAEKAM------  173 (280)
T ss_dssp             CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHH-HHHHHHHHHHTTTTCEEEEEECGGGTSCC------
T ss_pred             cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHH-HHHHHHHHHhhcCCCeEEEEeccccccCC------
Confidence             6899999999986531         233445678899999986 777776542   23599999999876432      


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                          .+...|+.+|...+.+.+.+       +.++.+++|+.|..+......   ........ .....+       ...
T Consensus       174 ----~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~-~~~~~p-------~~~  238 (280)
T 3nrc_A          174 ----PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS---NFKKMLDY-NAMVSP-------LKK  238 (280)
T ss_dssp             ----TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT---THHHHHHH-HHHHST-------TCS
T ss_pred             ----CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc---chHHHHHH-HHhcCC-------CCC
Confidence                24678999999999987754       356788999999876532111   11112211 111112       123


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +...+|+|++++.++.....  ...+.++++.+|..
T Consensus       239 ~~~pedvA~~v~~l~s~~~~--~~tG~~i~vdgG~~  272 (280)
T 3nrc_A          239 NVDIMEVGNTVAFLCSDMAT--GITGEVVHVDAGYH  272 (280)
T ss_dssp             CCCHHHHHHHHHHTTSGGGT--TCCSCEEEESTTGG
T ss_pred             CCCHHHHHHHHHHHhCcccC--CcCCcEEEECCCcc
Confidence            68899999999999876432  12356999988754

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.89  E-value=1.5e-22  Score=168.83  Aligned_cols=204  Identities=9%  Similarity=0.022  Sum_probs=139.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHHh---C
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALKF---G   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~---~   75 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++++|+.++.+...+.+   +..+.++.+|++|++++.++++.+   +
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g   82 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEG---FTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHA   82 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTT---CEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence            36899999999999999999999999   89999999987766554432   457888999999999988877644   5


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++|++||+||.....    .+..+++..+++|+.+++ ++++++    ++.+..+||++||...+.+.          .+
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~  151 (252)
T 3h7a_A           83 PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGF-VSGRESARLMLAHGQGKIFFTGATASLRGG----------SG  151 (252)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEEEEGGGTCCC----------TT
T ss_pred             CceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCcEEEEECCHHHcCCC----------CC
Confidence            899999999986542    223345678899999986 666655    44555699999998876432          23


Q ss_pred             cchHHHHHHHHHHHHHHHc-------CCe-eEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          148 VNVYGKSKVAAEKFIYEKC-------SNF-AILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~~-------~~~-~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      ...|+.||...+.+.+.+.       .++ .+++||.|..+-....     ...... .....       ...+ +...+
T Consensus       152 ~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~-----~~~~~~-~~~~~-------~~~~-~~~pe  217 (252)
T 3h7a_A          152 FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER-----REQMFG-KDALA-------NPDL-LMPPA  217 (252)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------------------CCHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc-----chhhhh-hhhhc-------CCcc-CCCHH
Confidence            6789999999999777643       345 5688888765432110     000000 00000       0122 78999


Q ss_pred             HHHHHHHHHHhhhh
Q 020880          220 DVVKIILALTNRWL  233 (320)
Q Consensus       220 D~a~~~~~~~~~~~  233 (320)
                      |+|++++.++..+.
T Consensus       218 dvA~~~~~l~s~~~  231 (252)
T 3h7a_A          218 AVAGAYWQLYQQPK  231 (252)
T ss_dssp             HHHHHHHHHHHCCG
T ss_pred             HHHHHHHHHHhCch
Confidence            99999999998643

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.89  E-value=1.6e-22  Score=171.37  Aligned_cols=221  Identities=17%  Similarity=0.202  Sum_probs=143.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-CChhhhhh---hCCCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      +|++|||||+|+||++++++|+++|   ++|++++|+. +......+   ..+..+.++.+|++|++++.++++    .+
T Consensus        29 ~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           29 RPVAIVTGGRRGIGLGIARALAASG---FDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCC---CeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999   8899888643 33333222   234578889999999999877765    34


Q ss_pred             CCCCEEEECCCccC--c----cccccCchhhhhccccccHHHHHhhhhh----cc---CceEEEeechhhhcccCCCCcc
Q 020880           75 GQPDVVVNCAALSV--P----RVCENDPDSAMSINVPSSLVNWLSSFTE----NK---ENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        75 ~~~d~Vih~a~~~~--~----~~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~---~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                      +++|+|||+||...  .    ..+.++++..+++|+.+++ ++++++..    .+   ..+||++||...+.+.      
T Consensus       106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------  178 (280)
T 4da9_A          106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTV-FFTQAVLKAMLASDARASRSIINITSVSAVMTS------  178 (280)
T ss_dssp             SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHH-HHHHHHHHHHHHHCCCCCEEEEEECCC------------
T ss_pred             CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC------
Confidence            68999999999732  1    1233456788899999986 66666543    22   3489999998876432      


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                          .+...|+.+|...+.+.+.+.       .++.+++|+.|..+......     .... .....+ ..     ....
T Consensus       179 ----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-----~~~~-~~~~~~-~~-----p~~r  242 (280)
T 4da9_A          179 ----PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS-----GKYD-GLIESG-LV-----PMRR  242 (280)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------------C
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc-----hhHH-HHHhhc-CC-----CcCC
Confidence                235689999999999777642       35678999999876432110     0000 001010 00     1234


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      +.+++|+|++++.++.....  -..+.++++.+|...
T Consensus       243 ~~~pedvA~~v~~L~s~~~~--~itG~~i~vdGG~~~  277 (280)
T 4da9_A          243 WGEPEDIGNIVAGLAGGQFG--FATGSVIQADGGLSI  277 (280)
T ss_dssp             CBCHHHHHHHHHHHHTSTTG--GGTTCEEEESTTCC-
T ss_pred             cCCHHHHHHHHHHHhCcccc--CCCCCEEEECCCccc
Confidence            78899999999999876432  123559999887543

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.89  E-value=1.4e-22  Score=168.72  Aligned_cols=214  Identities=19%  Similarity=0.164  Sum_probs=149.1

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQ   76 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~   76 (320)
                      |++|+||||||+|+||++++++|+++|   ++|+++.|++++...+        ..+.+|++|++++.++++.    +++
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~--------~~~~~D~~~~~~~~~~~~~~~~~~g~   81 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADG---HKVAVTHRGSGAPKGL--------FGVEVDVTDSDAVDRAFTAVEEHQGP   81 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSSCCCTTS--------EEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHHHHHh--------cCeeccCCCHHHHHHHHHHHHHHcCC
Confidence            346899999999999999999999999   8999999987654322        1378999999988777653    468


Q ss_pred             CCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           77 PDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        77 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      +|+|||+||.....    .+.++++..+++|+.+++ ++++++.    +.+..+||++||...+.+.          .+.
T Consensus        82 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~  150 (247)
T 1uzm_A           82 VEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAF-RVAQRASRSMQRNKFGRMIFIGSVSGLWGI----------GNQ  150 (247)
T ss_dssp             CSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCEEEEEECCCCC---------------CC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhCCCCEEEEECCHhhccCC----------CCC
Confidence            99999999976431    233456788999999986 7777664    3556799999998765321          235


Q ss_pred             chHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          149 NVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      ..|+.+|...+.+.+.+       +.++.+++|+.+..+-...     ........ .....       ....+++.+|+
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~~~~~-~~~~~-------p~~~~~~~~dv  217 (247)
T 1uzm_A          151 ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-----LDERIQQG-ALQFI-------PAKRVGTPAEV  217 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-----SCHHHHHH-HGGGC-------TTCSCBCHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh-----cCHHHHHH-HHhcC-------CCCCCcCHHHH
Confidence            68999999999877654       3467889999996542110     00111111 11111       12347899999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      |++++.++.....  ...+.++++.+|...
T Consensus       218 A~~~~~l~s~~~~--~~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          218 AGVVSFLASEDAS--YISGAVIPVDGGMGM  245 (247)
T ss_dssp             HHHHHHHHSGGGT--TCCSCEEEESTTTTC
T ss_pred             HHHHHHHcCcccc--CCcCCEEEECCCccc
Confidence            9999999875322  123558999887543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.89  E-value=1.2e-22  Score=170.02  Aligned_cols=218  Identities=17%  Similarity=0.150  Sum_probs=151.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH---hCCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK---FGQPD   78 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~~d   78 (320)
                      ++|++|||||+|+||++++++|+++|   ++|+++.|+.+   ...+..+..+.++.+|++|++++.++++.   ++++|
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~---~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id   81 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAG---AQVVVLDIRGE---DVVADLGDRARFAAADVTDEAAVASALDLAETMGTLR   81 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHT---CEEEEEESSCH---HHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCchH---HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            36899999999999999999999999   89999998543   23334456788899999999988776653   46899


Q ss_pred             EEEECCCccCcc--------ccccCchhhhhccccccHHHHHhhhhh------------ccCceEEEeechhhhcccCCC
Q 020880           79 VVVNCAALSVPR--------VCENDPDSAMSINVPSSLVNWLSSFTE------------NKENLLIHLSTDQVYEGVKSF  138 (320)
Q Consensus        79 ~Vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~~~l~~~~~------------~~~~~~v~~Ss~~vy~~~~~~  138 (320)
                      ++||+||.....        .+.++++..+++|+.+++ ++++++..            .+..++|++||...+.+..  
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  158 (257)
T 3tl3_A           82 IVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSF-NVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI--  158 (257)
T ss_dssp             EEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHH-HHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH--
T ss_pred             EEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHH-HHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC--
Confidence            999999975321        233456788999999986 77776653            2334899999988764321  


Q ss_pred             CcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCc
Q 020880          139 YKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDE  211 (320)
Q Consensus       139 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (320)
                              +...|+.||...+.+.+.+       +.++.+++|+.|..+-..     ......... .....+.      
T Consensus       159 --------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~-----~~~~~~~~~-~~~~~~~------  218 (257)
T 3tl3_A          159 --------GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLA-----SLPEEARAS-LGKQVPH------  218 (257)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC--------CHHHHHH-HHHTSSS------
T ss_pred             --------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhh-----hccHHHHHH-HHhcCCC------
Confidence                    3568999999999877654       235678999999776431     111122211 1112221      


Q ss_pred             ccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          212 CRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       212 ~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      ...+.+.+|+|++++.++.....    .+.++++.+|..++
T Consensus       219 ~~r~~~p~dva~~v~~l~s~~~i----tG~~i~vdGG~~~~  255 (257)
T 3tl3_A          219 PSRLGNPDEYGALAVHIIENPML----NGEVIRLDGAIRMA  255 (257)
T ss_dssp             SCSCBCHHHHHHHHHHHHHCTTC----CSCEEEESTTC---
T ss_pred             CCCccCHHHHHHHHHHHhcCCCC----CCCEEEECCCccCC
Confidence            12478999999999999976333    35599999886544

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.89  E-value=1.5e-22  Score=170.90  Aligned_cols=229  Identities=14%  Similarity=0.055  Sum_probs=158.3

Q ss_pred             CCcEEEEEcCC--ChhhHHHHHHHhhccCCCceEEEecCCCCChhh---hhhhCCCcceEEEeeCCCcccHHHHHHHh--
Q 020880            2 SKKRVLVVGGT--GYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL---LLDALPHSFVFFDVDLKSGSGFDAVALKF--   74 (320)
Q Consensus         2 ~~~~ilItGat--G~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   74 (320)
                      ..|+||||||+  |+||++++++|+++|   ++|++.+|+......   +.... ..+.++.+|++|++++.++++.+  
T Consensus        13 ~~k~vlITGa~~~~giG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           13 DGKRILLTGLLSNRSIAYGIAKACKREG---AELAFTYVGDRFKDRITEFAAEF-GSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHHHHT-TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHcC---CCEEEEecchhhHHHHHHHHHHc-CCcEEEECCCCCHHHHHHHHHHHHH
Confidence            36899999999  999999999999999   899999888433222   22232 34788999999999988777643  


Q ss_pred             --CCCCEEEECCCccCcc---------ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcc
Q 020880           75 --GQPDVVVNCAALSVPR---------VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        75 --~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                        +++|+|||+||.....         .+..+++..+++|+.+++ ++++++...  ...++|++||...+.+.      
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~g~iv~isS~~~~~~~------  161 (271)
T 3ek2_A           89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFP-ALAKAALPMLSDDASLLTLSYLGAERAI------  161 (271)
T ss_dssp             HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHH-HHHHHHGGGEEEEEEEEEEECGGGTSBC------
T ss_pred             HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHH-HHHHHHHHHhccCceEEEEeccccccCC------
Confidence              6899999999986431         233455678899999996 888887653  12389999998876532      


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                          .+...|+.+|...+.+.+.+       +.++.+++|+.|..+-....   ....... .......+       ...
T Consensus       162 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~-~~~~~~~~-------~~~  226 (271)
T 3ek2_A          162 ----PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI---KSFGKIL-DFVESNSP-------LKR  226 (271)
T ss_dssp             ----TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC---HHHHHHH-HHHHHHST-------TSS
T ss_pred             ----CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc---cchHHHH-HHHHhcCC-------cCC
Confidence                23678999999999977654       35678899999987643210   0001111 11111222       224


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHH
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAE  258 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~  258 (320)
                      +...+|+|++++.++.....  ...+.++++.+|...++.++++
T Consensus       227 ~~~pedva~~i~~l~s~~~~--~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          227 NVTIEQVGNAGAFLLSDLAS--GVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             CCCHHHHHHHHHHHHSGGGT--TCCSEEEEESTTGGGBCCCC--
T ss_pred             CCCHHHHHHHHHHHcCcccC--CeeeeEEEECCCeeeehhhhhh
Confidence            68899999999999876432  2235699999998777666543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.89  E-value=4.9e-22  Score=169.68  Aligned_cols=221  Identities=17%  Similarity=0.079  Sum_probs=156.7

Q ss_pred             CCcEEEEEcCCC--hhhHHHHHHHhhccCCCceEEEecCCCCChhhhh---hhCCCcceEEEeeCCCcccHHHHHHH---
Q 020880            2 SKKRVLVVGGTG--YLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL---DALPHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         2 ~~~~ilItGatG--~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      .+|++|||||+|  +||++++++|+++|   ++|++.+|+.+..+...   ... ..+.++.+|++|+++++++++.   
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQG---AEVALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFKVLAE  104 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            367999999998  99999999999999   89999999864433222   222 3467899999999998877764   


Q ss_pred             -hCCCCEEEECCCccCc--------cccccCchhhhhccccccHHHHHhhhhhcc--CceEEEeechhhhcccCCCCccc
Q 020880           74 -FGQPDVVVNCAALSVP--------RVCENDPDSAMSINVPSSLVNWLSSFTENK--ENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~--~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                       ++++|++||+||....        ..+..+++..+++|+.+++ ++++++...-  ..+||++||...+...       
T Consensus       105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~g~IV~isS~~~~~~~-------  176 (296)
T 3k31_A          105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFT-YIASKAEPLMTNGGSILTLSYYGAEKVV-------  176 (296)
T ss_dssp             HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHGGGCTTCEEEEEEECGGGTSCC-------
T ss_pred             HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHH-HHHHHHHHHhhcCCEEEEEEehhhccCC-------
Confidence             3689999999998642        2233456788999999996 8888876532  2389999998876432       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChH-HHHHHHHhcCCceEeecCcccC
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPI-QWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                         .+...|+.||...+.+.+.+       +.++.+++|+.|..+...     .... ...........++       ..
T Consensus       177 ---~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~-----~~~~~~~~~~~~~~~~p~-------~r  241 (296)
T 3k31_A          177 ---PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASS-----GISDFHYILTWNKYNSPL-------RR  241 (296)
T ss_dssp             ---TTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCC-----SCHHHHHHHHHHHHHSTT-------SS
T ss_pred             ---CCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhh-----cccchHHHHHHHHhcCCC-------CC
Confidence               23668999999999987764       245678999999876532     1111 1111111111221       23


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      +...+|+|++++.++.....  ...+.++++.+|...
T Consensus       242 ~~~pedvA~~v~fL~s~~a~--~itG~~i~vdGG~~~  276 (296)
T 3k31_A          242 NTTLDDVGGAALYLLSDLGR--GTTGETVHVDCGYHV  276 (296)
T ss_dssp             CCCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHcCCccC--CccCCEEEECCCccc
Confidence            67899999999999876432  123559999988543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.89  E-value=6e-23  Score=173.07  Aligned_cols=204  Identities=14%  Similarity=0.090  Sum_probs=143.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~d   78 (320)
                      +|++|||||+|+||++++++|+++|   ++|++.+|+.+......+.++..+.++.+|++|++++.++++    .++++|
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           28 KKIAIVTGAGSGVGRAVAVALAGAG---YGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD  104 (272)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999   899999999777666666556678889999999998877765    346899


Q ss_pred             EEEECCCccCcc-----ccccCchhhhhccccccHHHHHhhhh----hcc--CceEEEeechhhhcccCCCCcccCCCCC
Q 020880           79 VVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLSSFT----ENK--ENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        79 ~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~--~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +|||+||...+.     .+.++++..+++|+.+++ ++++++.    +.+  ..+||++||...+.+.          .+
T Consensus       105 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~----------~~  173 (272)
T 4dyv_A          105 VLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPF-LCTQEAFRVMKAQEPRGGRIINNGSISATSPR----------PY  173 (272)
T ss_dssp             EEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC----------TT
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHH-HHHHHHHHHHHhCCCCCcEEEEECchhhcCCC----------CC
Confidence            999999986431     223445688999999985 6666554    332  3499999998876432          24


Q ss_pred             cchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+.+.+.       .++.+++|+.|..+-....     .... ...        ........+.+++|
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-----~~~~-~~~--------~~~~~~~~~~~ped  239 (272)
T 4dyv_A          174 SAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKM-----KAGV-PQA--------DLSIKVEPVMDVAH  239 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------------------CHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhh-----cccc-hhh--------hhcccccCCCCHHH
Confidence            6789999999999877642       3567799999876532110     0000 000        00011223689999


Q ss_pred             HHHHHHHHHhhhhc
Q 020880          221 VVKIILALTNRWLS  234 (320)
Q Consensus       221 ~a~~~~~~~~~~~~  234 (320)
                      +|++++.++..+..
T Consensus       240 vA~~v~fL~s~~~~  253 (272)
T 4dyv_A          240 VASAVVYMASLPLD  253 (272)
T ss_dssp             HHHHHHHHHHSCTT
T ss_pred             HHHHHHHHhCCCCc
Confidence            99999999987643

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.89  E-value=2e-22  Score=170.94  Aligned_cols=225  Identities=13%  Similarity=0.100  Sum_probs=157.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      +|++|||||+|+||++++++|+++|   ++|++.+|+.+......+.+   +..+.++.+|++|++++.++++.    ++
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           28 SPVALITGAGSGIGRATALALAADG---VTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG  104 (283)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999   89999999876655544432   45678899999999988776653    46


Q ss_pred             CCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|++||+||....     ..+..+++..+++|+.+++ ++++++    ++.+..+||++||...+...        +..
T Consensus       105 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~--------~~~  175 (283)
T 3v8b_A          105 HLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTF-LTLHLTVPYLKQRGGGAIVVVSSINGTRTF--------TTP  175 (283)
T ss_dssp             CCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCSBTTTBC--------CST
T ss_pred             CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCceEEEEcChhhccCC--------CCC
Confidence            89999999997532     2223345678999999996 777776    55556699999998765311        122


Q ss_pred             CcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cc--cCc
Q 020880          147 PVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--EC--RCP  215 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~  215 (320)
                      +...|+.+|...+.+.+.+.       .++.+++||.|..+-...... ..  ...   .  ..+......  ..  ..+
T Consensus       176 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~--~~~---~--~~~~~~~~~~~p~~~~r~  247 (283)
T 3v8b_A          176 GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKL-RH--EEE---T--AIPVEWPKGQVPITDGQP  247 (283)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTB-CC--HHH---H--SCCCBCTTCSCGGGTTCC
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccc-cc--chh---h--hhhhhhhhhcCccccCCC
Confidence            46789999999999887642       346789999998765321110 00  000   0  001111111  11  346


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ...+|+|++++.++.....  -..+.++++.+|.
T Consensus       248 ~~pedvA~~v~fL~s~~a~--~itG~~i~vdGG~  279 (283)
T 3v8b_A          248 GRSEDVAELIRFLVSERAR--HVTGSPVWIDGGQ  279 (283)
T ss_dssp             BCHHHHHHHHHHHTSGGGT--TCCSCEEEESTTH
T ss_pred             CCHHHHHHHHHHHcCcccc--CCcCCEEEECcCc
Confidence            7899999999999876432  1235589998763

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.89  E-value=2.4e-22  Score=168.22  Aligned_cols=221  Identities=17%  Similarity=0.159  Sum_probs=155.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEec-CCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~-r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      .+|+||||||+|+||++++++|+++|   ++|++.+ |+.+.......   ..+..+.++.+|++|.+++.++++.    
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDG---FRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTT---EEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            36899999999999999999999999   8888877 55444443332   2345688899999999988777653    


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++++|+|||+||.....    .+..+++..+++|+.+++ ++++++    ++.+..+||++||...+.+.          
T Consensus        89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  157 (256)
T 3ezl_A           89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLF-NVTKQVIDGMVERGWGRIINISSVNGQKGQ----------  157 (256)
T ss_dssp             TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCCCGGGSC----------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCEEEEEcchhhccCC----------
Confidence            46899999999986532    223445678999999985 665554    45566699999998776432          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+.+.+       +.++.+++|+.+..+....     .......... ...+       ...+.+.
T Consensus       158 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~~~~~~~-~~~~-------~~~~~~~  224 (256)
T 3ezl_A          158 FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-----IRPDVLEKIV-ATIP-------VRRLGSP  224 (256)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-----SCHHHHHHHH-HHST-------TSSCBCH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc-----cCHHHHHHHH-hcCC-------CCCCcCH
Confidence            24679999999999877654       2356789999997653211     1112222222 1111       2346789


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      +|+|+++++++.....  ...+.++++.+|..+
T Consensus       225 ~dva~~~~~l~s~~~~--~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          225 DEIGSIVAWLASEESG--FSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHHHHHHHHHHSGGGT--TCCSCEEEESTTSCC
T ss_pred             HHHHHHHHHHhCCccc--CCcCcEEEECCCEeC
Confidence            9999999999865422  223569999887543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.89  E-value=5.5e-22  Score=165.42  Aligned_cols=213  Identities=16%  Similarity=0.179  Sum_probs=150.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      ++|+|+||||+|+||++++++|+++|   ++|++..|+.++..        .+.++.+|++|+++++++++.    ++++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~--------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i   88 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAG---DKVAITYRSGEPPE--------GFLAVKCDITDTEQVEQAYKEIEETHGPV   88 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSCCCT--------TSEEEECCTTSHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHhhc--------cceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999   89999999865432        266789999999988776653    4679


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||.....    ....+++..+++|+.+++ ++++++.    +.+..+||++||...+.+.          .+..
T Consensus        89 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~  157 (253)
T 2nm0_A           89 EVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTF-RVVKRANRAMLRAKKGRVVLISSVVGLLGS----------AGQA  157 (253)
T ss_dssp             SEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHH-HHHHHHHHHHHHHTCEEEEEECCCCCCCCH----------HHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCEEEEECchhhCCCC----------CCcH
Confidence            9999999976432    234567888999999986 7766554    3456699999998765321          1256


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...+.+.+.+       +.++.+++|+.+..+-... ...    ..... +....+       ...+++.+|+|
T Consensus       158 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~----~~~~~-~~~~~p-------~~~~~~p~dvA  224 (253)
T 2nm0_A          158 NYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV-LTD----EQRAN-IVSQVP-------LGRYARPEEIA  224 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC--------------CHHH-HHTTCT-------TCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-cCH----HHHHH-HHhcCC-------CCCCcCHHHHH
Confidence            8999999999877754       2356789999886653211 000    01111 111111       12478999999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      ++++.++.....  ...+..+++.+|...
T Consensus       225 ~~i~~l~s~~~~--~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          225 ATVRFLASDDAS--YITGAVIPVDGGLGM  251 (253)
T ss_dssp             HHHHHHHSGGGT--TCCSCEEEESTTTTC
T ss_pred             HHHHHHhCcccc--CCcCcEEEECCcccc
Confidence            999999876432  123558999887543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.89  E-value=6e-23  Score=177.05  Aligned_cols=213  Identities=15%  Similarity=0.146  Sum_probs=141.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CC--cceEEEeeCCCcccHHHHHHHh---
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PH--SFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~--~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      +|+||||||+|+||++++++|+++|   ++|++.+|+.++.......+   +.  .+.++.+|++|++++.++++.+   
T Consensus         8 ~k~vlVTGas~gIG~~la~~l~~~G---~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            8 GRTAFVTGGANGVGIGLVRQLLNQG---CKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             TCEEEEETTTSTHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999   89999999977655544332   22  6788999999999888777643   


Q ss_pred             -CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhhc----------cCceEEEeechhhhcccCCCC
Q 020880           75 -GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTEN----------KENLLIHLSTDQVYEGVKSFY  139 (320)
Q Consensus        75 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~~----------~~~~~v~~Ss~~vy~~~~~~~  139 (320)
                       +++|+|||+||......    +..+++..+++|+.+++ ++++++...          +..+||++||...+.+..   
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~---  160 (319)
T 3ioy_A           85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVV-NGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG---  160 (319)
T ss_dssp             TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS---
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC---
Confidence             68899999999764321    22345678999999996 777776543          234799999998875432   


Q ss_pred             cccCCCCCcchHHHHHHHHHHHHHH----H---cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHh--cCCceEeecC
Q 020880          140 KEEDEIAPVNVYGKSKVAAEKFIYE----K---CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLS--KGEKVEFFHD  210 (320)
Q Consensus       140 ~E~~~~~p~~~Y~~sK~~~e~~~~~----~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  210 (320)
                             ....|+.||...+.+.+.    +   +.++.+++|+.|.++-......   ....+.....  ....+.....
T Consensus       161 -------~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  230 (319)
T 3ioy_A          161 -------SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDI---RPDALKGEVKPVDKTAVERLAG  230 (319)
T ss_dssp             -------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC--------------------------------CC
T ss_pred             -------CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccccccc---CchhhcccccchhHHHHHHHHH
Confidence                   356899999966655443    3   4567889999998764321100   0000100000  0000111111


Q ss_pred             cccCceeHHHHHHHHHHHHhhh
Q 020880          211 ECRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~~  232 (320)
                      .....++++|+|+.++.+++++
T Consensus       231 ~~~~~~~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          231 VHEFGMEPDVIGARVIEAMKAN  252 (319)
T ss_dssp             GGGSSBCHHHHHHHHHHHHHTT
T ss_pred             hhhcCCCHHHHHHHHHHHHHcC
Confidence            1222389999999999999873

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.89  E-value=1.1e-22  Score=172.52  Aligned_cols=220  Identities=13%  Similarity=0.115  Sum_probs=158.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh---CCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF---GQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~~d~   79 (320)
                      +|++|||||+|.||++++++|+++|   ++|++.+|+.++...+.+.++..+.++.+|++|.+++.++++.+   +++|+
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~~G---~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~  106 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHADG---LGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRY  106 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCe
Confidence            5789999999999999999999999   89999999987777666666677889999999999988887654   46899


Q ss_pred             EEEC-CCccCcc---------ccccCchhhhhccccccHHHHHhhhhh----------ccCceEEEeechhhhcccCCCC
Q 020880           80 VVNC-AALSVPR---------VCENDPDSAMSINVPSSLVNWLSSFTE----------NKENLLIHLSTDQVYEGVKSFY  139 (320)
Q Consensus        80 Vih~-a~~~~~~---------~~~~~~~~~~~~n~~~~~~~~l~~~~~----------~~~~~~v~~Ss~~vy~~~~~~~  139 (320)
                      +||+ |+.....         ....+++..+++|+.+++ ++++++..          .+..+||++||...+...    
T Consensus       107 lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  181 (281)
T 3ppi_A          107 AVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTY-NVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ----  181 (281)
T ss_dssp             EEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC----
T ss_pred             EEEccCcccccccccccccccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC----
Confidence            9999 4443221         112235788899999986 77776642          233489999999887532    


Q ss_pred             cccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcc
Q 020880          140 KEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       140 ~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                            .+...|+.+|...+.+.+.+       +.++.+++|+.|..+-...     .......... ...+.      .
T Consensus       182 ------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----~~~~~~~~~~-~~~~~------~  243 (281)
T 3ppi_A          182 ------IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES-----VGEEALAKFA-ANIPF------P  243 (281)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-----TCHHHHHHHH-HTCCS------S
T ss_pred             ------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc-----ccHHHHHHHH-hcCCC------C
Confidence                  24678999999998877654       3456789999986542210     1111222222 12211      1


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      ..+++.+|+|++++.++....    ..+.++++.+|..++
T Consensus       244 ~~~~~pedvA~~v~~l~s~~~----~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          244 KRLGTPDEFADAAAFLLTNGY----INGEVMRLDGAQRFT  279 (281)
T ss_dssp             SSCBCHHHHHHHHHHHHHCSS----CCSCEEEESTTCCCC
T ss_pred             CCCCCHHHHHHHHHHHHcCCC----cCCcEEEECCCcccC
Confidence            357899999999999997632    345599999987654

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.89  E-value=4.3e-22  Score=168.01  Aligned_cols=219  Identities=16%  Similarity=0.092  Sum_probs=152.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh-hhh---hhhCCCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP-QLL---LDALPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~-~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      ++|+||||||+|+||++++++|+++|   ++|++..|+.... +.+   ....+..+.++.+|++|++++.++++.    
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMG---LKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            35799999999999999999999999   8999999965432 222   223345788899999999988777754    


Q ss_pred             hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++++|+|||+||......    +.++++..+++|+.+++ ++++++    ++.+..++|++||...+.+.          
T Consensus       105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  173 (271)
T 4iin_A          105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAF-IGCREALKVMSKSRFGSVVNVASIIGERGN----------  173 (271)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHH-HHHHHHHHHHhhcCCCEEEEEechhhcCCC----------
Confidence            368999999999865422    22345678899999986 666655    34455699999998876432          


Q ss_pred             CCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+.+.+.       .++.+++|+.+..+-...     ...... .....       ......+.+.
T Consensus       174 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----~~~~~~-~~~~~-------~~~~~~~~~p  240 (271)
T 4iin_A          174 MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN-----LKDELK-ADYVK-------NIPLNRLGSA  240 (271)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------------CGG-------GCTTCSCBCH
T ss_pred             CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh-----hcHHHH-HHHHh-------cCCcCCCcCH
Confidence            246789999999999877642       356789999987654211     000000 00000       1123457899


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|+|++++.++.....  ...+.++++.+|.
T Consensus       241 ~dvA~~i~~l~s~~~~--~itG~~i~vdGG~  269 (271)
T 4iin_A          241 KEVAEAVAFLLSDHSS--YITGETLKVNGGL  269 (271)
T ss_dssp             HHHHHHHHHHHSGGGT--TCCSCEEEESTTS
T ss_pred             HHHHHHHHHHhCCCcC--CCcCCEEEeCCCe
Confidence            9999999999876432  1235699998874

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.89  E-value=3.7e-22  Score=168.63  Aligned_cols=221  Identities=14%  Similarity=0.057  Sum_probs=157.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      ++|++|||||+|+||++++++|+++|   ++|++.+|+.+..+.+.+.   .+..+.++.+|++|+++++++++.    +
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAG---AQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            36899999999999999999999999   8999999987766554433   245788899999999998777753    4


Q ss_pred             CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhh----cc-CceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTE----NK-ENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~----~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +++|+|||+||......    ..++++..+++|+.+++ ++++++..    .+ ..++|++||...+...        ..
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~--------~~  178 (276)
T 3r1i_A          108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVF-LTAQAAARAMVDQGLGGTIITTASMSGHIIN--------IP  178 (276)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTSCEEEEEECCGGGTSCC--------CS
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCcEEEEECchHhcccC--------CC
Confidence            68999999999875432    22344567789999986 77776643    33 2589999998765422        11


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.||...+.+.+.+       +.++.+++|+.|..+-...     .. ... .......+       ...+...
T Consensus       179 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~-----~~-~~~-~~~~~~~p-------~~r~~~p  244 (276)
T 3r1i_A          179 QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP-----LA-DYH-ALWEPKIP-------LGRMGRP  244 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG-----GG-GGH-HHHGGGST-------TSSCBCG
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc-----ch-HHH-HHHHhcCC-------CCCCcCH
Confidence            24578999999999987764       2456789999998764321     00 111 11111212       2346889


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +|+|++++.++.....  -..+.++++.+|..
T Consensus       245 edvA~~v~fL~s~~~~--~itG~~i~vdGG~~  274 (276)
T 3r1i_A          245 EELTGLYLYLASAASS--YMTGSDIVIDGGYT  274 (276)
T ss_dssp             GGSHHHHHHHHSGGGT--TCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHcCcccc--CccCcEEEECcCcc
Confidence            9999999999876432  12355899988753

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.89  E-value=3.2e-22  Score=169.87  Aligned_cols=226  Identities=14%  Similarity=0.088  Sum_probs=156.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh-hhh---hhhCCCcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP-QLL---LDALPHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~-~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      ++|++|||||+|+||++++++|+++|   ++|+++.|+.+.. +..   ....+..+.++.+|++|.+++.++++    .
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRG---CKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999   8999999986432 222   22234567889999999998877665    3


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++++|+|||+||.....    .+.++++..+++|+.+++ ++++++...  +..+||++||...+...         ..+
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~g~iv~isS~~~~~~~---------~~~  174 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQF-FVAREAYKHLEIGGRLILMGSITGQAKA---------VPK  174 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHSCTTCEEEEECCGGGTCSS---------CSS
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHhcCCeEEEEechhhccCC---------CCC
Confidence            46899999999976432    123455778999999996 888888764  45699999998765321         113


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCC------CCCCCChHHHHHHHHhc-CCceEeecCccc
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTIS------PVPKSLPIQWIDSVLSK-GEKVEFFHDECR  213 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  213 (320)
                      ...|+.+|...+.+.+.+       +.++.+++|+.|.++....      ................. ..+       ..
T Consensus       175 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~  247 (283)
T 1g0o_A          175 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP-------LR  247 (283)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT-------TC
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC-------CC
Confidence            678999999999987754       4577899999998753110      00000001111111100 111       22


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .+.+.+|+|++++.++.....  ...+.++++.+|.
T Consensus       248 r~~~p~dvA~~v~~l~s~~~~--~itG~~i~vdgG~  281 (283)
T 1g0o_A          248 RVGLPIDIARVVCFLASNDGG--WVTGKVIGIDGGA  281 (283)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTC
T ss_pred             CCcCHHHHHHHHHHHhCcccc--CcCCCEEEeCCCc
Confidence            478999999999999876432  1235589998774

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.89  E-value=6.8e-22  Score=164.96  Aligned_cols=217  Identities=14%  Similarity=0.120  Sum_probs=150.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----CCcceEEEeeC--CCcccHHHHHH---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDL--KSGSGFDAVAL---   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl--~d~~~~~~~~~---   72 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++.+|+.+......+.+    ...+.++.+|+  +|.+++.++++   
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYG---ATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            35799999999999999999999999   89999999876655443322    23677899999  88888776665   


Q ss_pred             -HhCCCCEEEECCCccCc--c---ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCccc
Q 020880           73 -KFGQPDVVVNCAALSVP--R---VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        73 -~~~~~d~Vih~a~~~~~--~---~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                       .++++|++||+||....  +   ...++++..+++|+.+++ ++++++    ++.+..+||++||...+.+.       
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-------  159 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATF-MLTQALLPLLLKSDAGSLVFTSSSVGRQGR-------  159 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHTSSSCEEEEECCGGGTSCC-------
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHH-HHHHHHHHHHHHCCCCEEEEECChhhccCC-------
Confidence             34689999999997532  1   222344678999999996 777776    45566699999998876432       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHcC------CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEKCS------NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~~~------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                         .+...|+.+|...+.+.+.+..      ++..+.|+.|..+             +..... ...       ....+.
T Consensus       160 ---~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~-------------~~~~~~-~~~-------~~~~~~  215 (252)
T 3f1l_A          160 ---ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA-------------MRASAF-PTE-------DPQKLK  215 (252)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH-------------HHHHHC-TTC-------CGGGSB
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc-------------hhhhhC-Ccc-------chhccC
Confidence               2367899999999998776532      3455777766432             111111 111       112367


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHH
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ  255 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e  255 (320)
                      ..+|+|+++++++.....  ...+.++++.+|...++.|
T Consensus       216 ~p~dva~~~~~L~s~~~~--~itG~~i~vdgG~~~~~~q  252 (252)
T 3f1l_A          216 TPADIMPLYLWLMGDDSR--RKTGMTFDAQPGRKPGISQ  252 (252)
T ss_dssp             CTGGGHHHHHHHHSGGGT--TCCSCEEESSCC-------
T ss_pred             CHHHHHHHHHHHcCcccc--CCCCCEEEeCCCcCCCCCC
Confidence            899999999999876432  1235699999988776653

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.89  E-value=2.6e-22  Score=168.24  Aligned_cols=205  Identities=13%  Similarity=0.138  Sum_probs=142.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      ++|++|||||+|.||++++++|+++|   ++|++.+|+.+......+.+   +..+.++.+|++|++++.++++    .+
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAG---AKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW   79 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999   89999999876655444332   4567788999999998877665    34


Q ss_pred             CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|++||+||......    +..+++..+++|+.+++ .+.+++    ++.+..+||++||...+...          .
T Consensus        80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~g~IV~isS~~~~~~~----------~  148 (264)
T 3tfo_A           80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVL-WGIGAVLPIMEAQRSGQIINIGSIGALSVV----------P  148 (264)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTCCC----------T
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhCCCeEEEEEcCHHHcccC----------C
Confidence            68999999999864321    23445678899999986 666655    34455699999999877532          2


Q ss_pred             CcchHHHHHHHHHHHHHHHc-----CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          147 PVNVYGKSKVAAEKFIYEKC-----SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~-----~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      +...|+.+|...+.+.+.+.     .++..++||.|..+-......              ...........+.+...+|+
T Consensus       149 ~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~--------------~~~~~~~~~~~~~~~~pedv  214 (264)
T 3tfo_A          149 TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITH--------------EETMAAMDTYRAIALQPADI  214 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-------------------------------------CCCHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccc--------------hhHHHHHHhhhccCCCHHHH
Confidence            36689999999998877642     345679999886653210000              00000000011124789999


Q ss_pred             HHHHHHHHhhhhc
Q 020880          222 VKIILALTNRWLS  234 (320)
Q Consensus       222 a~~~~~~~~~~~~  234 (320)
                      |++++.++..+..
T Consensus       215 A~~v~~l~s~~~~  227 (264)
T 3tfo_A          215 ARAVRQVIEAPQS  227 (264)
T ss_dssp             HHHHHHHHHSCTT
T ss_pred             HHHHHHHhcCCcc
Confidence            9999999988543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.89  E-value=1.9e-22  Score=166.69  Aligned_cols=206  Identities=18%  Similarity=0.106  Sum_probs=147.1

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh------
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF------   74 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~------   74 (320)
                      |++|++|||||+|+||++++++|+++|   ++|+++.|+++...       ....++.+|++|++++.++++.+      
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   70 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNG---YTVLNIDLSANDQA-------DSNILVDGNKNWTEQEQSILEQTASSLQG   70 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCCTTS-------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEecCccccc-------cccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            778999999999999999999999999   89999999876532       23456789999999887776543      


Q ss_pred             CCCCEEEECCCccCcc-----ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           75 GQPDVVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +++|+|||+||.....     ....+++..+++|+.+++ ++++++...  ...++|++||...+.+          ..+
T Consensus        71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~g~iv~isS~~~~~~----------~~~  139 (236)
T 1ooe_A           71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSA-IAAKLATTHLKPGGLLQLTGAAAAMGP----------TPS  139 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHH-HHHHHHHHHEEEEEEEEEECCGGGGSC----------CTT
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHhccCCEEEEECchhhccC----------CCC
Confidence            5899999999975422     223445678899999986 777777653  1249999999987643          234


Q ss_pred             cchHHHHHHHHHHHHHHHc---------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          148 VNVYGKSKVAAEKFIYEKC---------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~~---------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      ...|+.+|...+.+.+.+.         .++.++||+.+.++-             ..... ...       ....++..
T Consensus       140 ~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~-------------~~~~~-~~~-------~~~~~~~~  198 (236)
T 1ooe_A          140 MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-------------NRKWM-PNA-------DHSSWTPL  198 (236)
T ss_dssp             BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-------------HHHHS-TTC-------CGGGCBCH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc-------------hhhcC-CCc-------cccccCCH
Confidence            6789999999999887653         345689999887642             11111 111       12235788


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|+|++++.++..+... ...+..+++.++.
T Consensus       199 ~dvA~~i~~~l~s~~~~-~~~G~~~~v~gg~  228 (236)
T 1ooe_A          199 SFISEHLLKWTTETSSR-PSSGALLKITTEN  228 (236)
T ss_dssp             HHHHHHHHHHHHCGGGC-CCTTCEEEEEEET
T ss_pred             HHHHHHHHHHHcCCCcc-cccccEEEEecCC
Confidence            99999998776443221 2235578777654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=9.2e-23  Score=172.21  Aligned_cols=194  Identities=15%  Similarity=0.092  Sum_probs=144.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+|+||||||+|+||++++++|+++|   ++|++++|+++....+.+.   .+..+.++.+|++|++++.++++.    +
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLK---SKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            46899999999999999999999999   8999999986554443322   245688899999999988777653    4


Q ss_pred             CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|+|||+||......    ...+++..+++|+.+++ ++++++    ++.+..+||++||...+.+.          .
T Consensus       107 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~  175 (272)
T 1yb1_A          107 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF-WTTKAFLPAMTKNNHGHIVTVASAAGHVSV----------P  175 (272)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCEEEEEECCCC-CCCH----------H
T ss_pred             CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCEEEEEechhhcCCC----------C
Confidence            68999999999764321    22345678899999975 655555    44566799999999877532          1


Q ss_pred             CcchHHHHHHHHHHHHHHH----------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          147 PVNVYGKSKVAAEKFIYEK----------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~----------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                      +...|+.+|...|.+++.+          +.++.++||+.+.++...    ..    . .              ....++
T Consensus       176 ~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~----~~----~-~--------------~~~~~~  232 (272)
T 1yb1_A          176 FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK----NP----S-T--------------SLGPTL  232 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT----CT----H-H--------------HHCCCC
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc----cc----c-c--------------cccCCC
Confidence            3568999999999877653          345788999999876421    00    0 0              012468


Q ss_pred             eHHHHHHHHHHHHhhh
Q 020880          217 YVRDVVKIILALTNRW  232 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~  232 (320)
                      +.+|+|++++.++..+
T Consensus       233 ~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          233 EPEEVVNRLMHGILTE  248 (272)
T ss_dssp             CHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHcC
Confidence            9999999999999874

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=1.3e-22  Score=171.96  Aligned_cols=207  Identities=14%  Similarity=0.143  Sum_probs=144.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHH---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      .+|+||||||+|+||++++++|+++|   ++|++++|+.++...+.+.+     +..+.++.+|++|++++.++++.   
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  107 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQG---LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS  107 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            35799999999999999999999999   89999999865544433221     23577889999999988777653   


Q ss_pred             -hCCCCEEEECCCccCccc----cccCchhhhhccccccH---HHHHhhhhhccC--ceEEEeechhhhcccCCCCcccC
Q 020880           74 -FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSL---VNWLSSFTENKE--NLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~---~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                       ++++|+|||+||......    ...+++..+++|+.+++   ..+++.+++.+.  .+||++||...+...        
T Consensus       108 ~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~--------  179 (279)
T 1xg5_A          108 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL--------  179 (279)
T ss_dssp             HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC--------
T ss_pred             hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC--------
Confidence             458999999999764321    22345678899999942   366677777664  699999999887421        


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH---------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK---------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~---------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                      +..+...|+.+|...+.+.+.+         +.++.+++|+.|.++........ ... .+....           ....
T Consensus       180 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-~~~-~~~~~~-----------~~~~  246 (279)
T 1xg5_A          180 PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK-DPE-KAAATY-----------EQMK  246 (279)
T ss_dssp             SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT-CHH-HHHHHH-----------C---
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhccc-Chh-HHhhhc-----------cccc
Confidence            2234668999999999876542         34678899999976531000000 000 010000           1123


Q ss_pred             ceeHHHHHHHHHHHHhhh
Q 020880          215 PVYVRDVVKIILALTNRW  232 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~  232 (320)
                      +++++|+|++++.++..+
T Consensus       247 ~~~~~dvA~~i~~l~~~~  264 (279)
T 1xg5_A          247 CLKPEDVAEAVIYVLSTP  264 (279)
T ss_dssp             CBCHHHHHHHHHHHHHSC
T ss_pred             CCCHHHHHHHHHHHhcCC
Confidence            689999999999999864

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.88  E-value=6.7e-22  Score=163.34  Aligned_cols=211  Identities=15%  Similarity=0.142  Sum_probs=150.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh----hCCCcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD----ALPHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      +||++|||||+|+||++++++|+++|   ++|++..|+.++.....+    ..+..+.++.+|++|++++.++++    .
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDG---YALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLER   77 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHh
Confidence            36899999999999999999999999   899999998766544433    224578889999999998877654    3


Q ss_pred             hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhh---ccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           74 FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTE---NKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~---~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++++|++||+||......    +..+++..+++|+.+++ ++++++..   .+..++|++||...+...          .
T Consensus        78 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~ii~~sS~~~~~~~----------~  146 (235)
T 3l77_A           78 FGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVW-RTLKAFLDSLKRTGGLALVTTSDVSARLI----------P  146 (235)
T ss_dssp             HSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEECCGGGSSCC----------T
T ss_pred             cCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcCCcEEEEecchhcccC----------C
Confidence            468999999999865432    33456788999999996 77777753   223477777776654321          1


Q ss_pred             CcchHHHHHHHHHHHHHHH-----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      ....|+.+|...+.+.+.+     +.++.+++||.+-.+-......                     ......++..+|+
T Consensus       147 ~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~---------------------~~~~~~~~~p~dv  205 (235)
T 3l77_A          147 YGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG---------------------KPKEKGYLKPDEI  205 (235)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC---------------------CCGGGTCBCHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC---------------------cccccCCCCHHHH
Confidence            2568999999999988764     4567889999986543211000                     0011246889999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCCC
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |++++.++..+...  ..+.++...+++
T Consensus       206 a~~v~~l~~~~~~~--~~~~~~~~~~~~  231 (235)
T 3l77_A          206 AEAVRCLLKLPKDV--RVEELMLRSVYQ  231 (235)
T ss_dssp             HHHHHHHHTSCTTC--CCCEEEECCTTS
T ss_pred             HHHHHHHHcCCCCC--ccceEEEeeccc
Confidence            99999999886432  123355554443

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.88  E-value=2.4e-22  Score=170.60  Aligned_cols=223  Identities=14%  Similarity=0.169  Sum_probs=156.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHHh--
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALKF--   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~--   74 (320)
                      .+|++|||||+|.||.+++++|+++|...+.|++..|+.+..+.+.+.+     +..+.++.+|++|+++++++++.+  
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999921128999999876655544332     346788999999999999888743  


Q ss_pred             --CCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccC
Q 020880           75 --GQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        75 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                        +++|+|||+||....     ..+.++++..+++|+.+++ ++++++    ++.+..+||++||...+...        
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~g~IV~isS~~~~~~~--------  182 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALI-NITQAVLPIFQAKNSGDIVNLGSIAGRDAY--------  182 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEECCGGGTSCC--------
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEEECChhhcCCC--------
Confidence              579999999997642     1233456788999999986 777776    44555699999998876432        


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                        .+...|+.+|...+.+.+.+       +.++.+++||.|..+-..... .... .........           ..++
T Consensus       183 --~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-~~~~-~~~~~~~~~-----------~~p~  247 (287)
T 3rku_A          183 --PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRY-RGNE-EQAKNVYKD-----------TTPL  247 (287)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHT-TTCH-HHHHHHHTT-----------SCCE
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccc-cCcH-HHHHHhhcc-----------cCCC
Confidence              23678999999999977764       346778999999765210000 0000 111111111           1245


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ..+|+|++++.++.....  ...+.++.+.+++.
T Consensus       248 ~pedvA~~v~~l~s~~~~--~i~g~~i~v~~g~~  279 (287)
T 3rku_A          248 MADDVADLIVYATSRKQN--TVIADTLIFPTNQA  279 (287)
T ss_dssp             EHHHHHHHHHHHHTSCTT--EEEEEEEEEETTEE
T ss_pred             CHHHHHHHHHHHhCCCCC--eEecceEEeeCCCC
Confidence            899999999999987432  12345788877653

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.88  E-value=5.9e-22  Score=168.85  Aligned_cols=222  Identities=17%  Similarity=0.098  Sum_probs=153.7

Q ss_pred             CCcEEEEEcCCCh--hhHHHHHHHhhccCCCceEEEecCCCCChh---hhhhhCCCcceEEEeeCCCcccHHHHHHH---
Q 020880            2 SKKRVLVVGGTGY--LGQHLLQGLSEIEGKPYDVAATHHSTPLPQ---LLLDALPHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         2 ~~~~ilItGatG~--IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      .+|++|||||+|+  ||+++++.|+++|   ++|++..|++...+   .+.... ..+.++.+|++|.++++++++.   
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAG---AELAFTYQGDALKKRVEPLAEEL-GAFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTT---CEEEEEECSHHHHHHHHHHHHHH-TCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHHH
Confidence            3679999999999  9999999999999   88999988843222   222222 3577899999999998877754   


Q ss_pred             -hCCCCEEEECCCccCc--------cccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCccc
Q 020880           74 -FGQPDVVVNCAALSVP--------RVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                       ++++|++||+||....        .....+++..+++|+.+++ ++++++...  ...+||++||...+...       
T Consensus       106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~m~~~g~Iv~isS~~~~~~~-------  177 (293)
T 3grk_A          106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLT-AVSRRAEKLMADGGSILTLTYYGAEKVM-------  177 (293)
T ss_dssp             HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHTTTCEEEEEEECGGGTSBC-------
T ss_pred             hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHH-HHHHHHHHhccCCCEEEEEeehhhccCC-------
Confidence             4689999999998642        2223455678999999996 888777642  13499999999877532       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                         .+...|+.||...+.+.+.+       +.++.+++|+.|..+-.....   ....... ......++       ..+
T Consensus       178 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~~~~~~-~~~~~~p~-------~r~  243 (293)
T 3grk_A          178 ---PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG---DFRYILK-WNEYNAPL-------RRT  243 (293)
T ss_dssp             ---TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------C---CHHHHHH-HHHHHSTT-------SSC
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhccc---chHHHHH-HHHhcCCC-------CCC
Confidence               23668999999999987764       345678999999876432110   0111111 11111222       236


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      ...+|+|++++.++.....  ...+.++++.+|..+
T Consensus       244 ~~pedvA~~v~~L~s~~~~--~itG~~i~vdGG~~~  277 (293)
T 3grk_A          244 VTIDEVGDVGLYFLSDLSR--SVTGEVHHADSGYHV  277 (293)
T ss_dssp             CCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHHHHcCcccc--CCcceEEEECCCccc
Confidence            7899999999999876432  223569999988543

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.88  E-value=8.8e-22  Score=165.51  Aligned_cols=227  Identities=13%  Similarity=0.092  Sum_probs=155.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh----CCC-cceEEEeeCCCcccHHHHHHH---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA----LPH-SFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~----~~~-~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      .+|++|||||+|.||++++++|+++|   ++|++.+|+.++.....+.    .+. .+.++.+|++|++++.++++.   
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAG---AAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            36899999999999999999999999   8999999987655444332    222 478899999999988776653   


Q ss_pred             -hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCC
Q 020880           74 -FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                       ++++|++||+||.....    .+.++++..+++|+.+++ ++++++.    +.+..+||++||...+.+.         
T Consensus        84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  153 (265)
T 3lf2_A           84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVI-HPVRAFLPQLESRADAAIVCVNSLLASQPE---------  153 (265)
T ss_dssp             HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHH-HHHHHHHHHHTTSTTEEEEEEEEGGGTSCC---------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHH-HHHHHHHHHhhccCCeEEEEECCcccCCCC---------
Confidence             46899999999986442    223445678899999986 7777663    3445589999998876432         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCC-----CCCCChHHHHHHHHhcCCceEeecCcc
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISP-----VPKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                       .+...|+.+|...+.+.+.+       +.++..++|+.|..+.....     ........+. ..+......     ..
T Consensus       154 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----p~  226 (265)
T 3lf2_A          154 -PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWT-AQLARNKQI-----PL  226 (265)
T ss_dssp             -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHH-HHHHHHTTC-----TT
T ss_pred             -CCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHH-HHHhhccCC-----Cc
Confidence             23678999999999977764       34567899999976521000     0000011111 111111001     12


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ..+...+|+|++++.++.....  -..+.++++.+|..
T Consensus       227 ~r~~~pedvA~~v~fL~s~~~~--~itG~~i~vdGG~~  262 (265)
T 3lf2_A          227 GRLGKPIEAARAILFLASPLSA--YTTGSHIDVSGGLS  262 (265)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGT--TCCSEEEEESSSCC
T ss_pred             CCCcCHHHHHHHHHHHhCchhc--CcCCCEEEECCCCc
Confidence            3468899999999999875432  12355899988753

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.88  E-value=1e-21  Score=163.19  Aligned_cols=213  Identities=14%  Similarity=0.116  Sum_probs=152.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhh-ccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSE-IEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPD   78 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~-~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d   78 (320)
                      +||++|||||+|+||++++++|++ .|   +.|+...|+++..       ...+.++.+|++|++++.++++.+  +++|
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g---~~v~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id   72 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKN---HTVINIDIQQSFS-------AENLKFIKADLTKQQDITNVLDIIKNVSFD   72 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTT---EEEEEEESSCCCC-------CTTEEEEECCTTCHHHHHHHHHHTTTCCEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCC---cEEEEeccccccc-------cccceEEecCcCCHHHHHHHHHHHHhCCCC
Confidence            478999999999999999999999 77   8888888876522       134678999999999998888643  3789


Q ss_pred             EEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhccC--ceEEEeechhhhcccCCCCcccCCCCCcchHH
Q 020880           79 VVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTENKE--NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYG  152 (320)
Q Consensus        79 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~  152 (320)
                      ++||+||.....    .+.++++..+++|+.+++ ++++++...-.  .++|++||...+.+.          .+...|+
T Consensus        73 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------~~~~~Y~  141 (244)
T 4e4y_A           73 GIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSI-YFIKGLENNLKVGASIVFNGSDQCFIAK----------PNSFAYT  141 (244)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHH-HHHHHTGGGEEEEEEEEEECCGGGTCCC----------TTBHHHH
T ss_pred             EEEECCccCCCCCcccCCHHHHHHHHHHccHHHH-HHHHHHHHHhccCcEEEEECCHHHccCC----------CCCchhH
Confidence            999999986432    223445678999999996 88888765422  389999999877532          2366899


Q ss_pred             HHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHH----------HHHHHhcCCceEeecCcccCc
Q 020880          153 KSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQW----------IDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       153 ~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~  215 (320)
                      .||...+.+.+.+       +.++.+++|+.|..+...     ......          .........       ....+
T Consensus       142 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------p~~r~  209 (244)
T 4e4y_A          142 LSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYR-----NLIQKYANNVGISFDEAQKQEEKEF-------PLNRI  209 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHH-----HHHHHHHHHHTCCHHHHHHHHHTTS-------TTSSC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhH-----HHHHhhhhhcCCCHHHHHHHHhhcC-------CCCCC
Confidence            9999999987754       356788999999765321     000000          011111111       12357


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .+++|+|++++.++.....  ...+.++++.+|.
T Consensus       210 ~~p~dvA~~v~~l~s~~~~--~itG~~i~vdGG~  241 (244)
T 4e4y_A          210 AQPQEIAELVIFLLSDKSK--FMTGGLIPIDGGY  241 (244)
T ss_dssp             BCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHhcCccc--cccCCeEeECCCc
Confidence            8999999999999976432  1235589998874

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.88  E-value=9.2e-22  Score=163.70  Aligned_cols=214  Identities=16%  Similarity=0.146  Sum_probs=148.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----CCCCE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----GQPDV   79 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~~d~   79 (320)
                      |+++||||+|+||++++++|+++|   ++|++..|+.+....+.+.++..+.++.+|++|++++.++++.+    +++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQG---HKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            579999999999999999999999   89999999876655555544456788999999999999888743    57999


Q ss_pred             EEECCCccC-c----cccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           80 VVNCAALSV-P----RVCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        80 Vih~a~~~~-~----~~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      +||+||... .    ..+..+++..+++|+.+++ ++++++.    +.+..+||++||...+.+.          .+...
T Consensus        78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~~  146 (248)
T 3asu_A           78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLV-YMTRAVLPGMVERNHGHIINIGSTAGSWPY----------AGGNV  146 (248)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEECCGGGTSCC----------TTCHH
T ss_pred             EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCceEEEEccchhccCC----------CCCch
Confidence            999999753 1    1223445678999999986 6666664    4555699999999876432          23678


Q ss_pred             HHHHHHHHHHHHHHH-------cCCeeEEeeccccc-CCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          151 YGKSKVAAEKFIYEK-------CSNFAILRSSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      |+.+|...+.+.+.+       +.++.+++|+.|.| +-........  .......      .     ....++..+|+|
T Consensus       147 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~--~~~~~~~------~-----~~~~~~~p~dvA  213 (248)
T 3asu_A          147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGD--DGKAEKT------Y-----QNTVALTPEDVS  213 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----------------------------------CCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCc--hHHHHHH------H-----hccCCCCHHHHH
Confidence            999999999987764       34678899999985 3211000000  0000000      0     011247899999


Q ss_pred             HHHHHHHhhhhccccccCceeEecC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGG  247 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~  247 (320)
                      ++++.++..+.   ...+..+.+.+
T Consensus       214 ~~v~~l~s~~~---~~~g~~i~v~~  235 (248)
T 3asu_A          214 EAVWWVSTLPA---HVNINTLEMMP  235 (248)
T ss_dssp             HHHHHHHHSCT---TCCCCEEEECC
T ss_pred             HHHHHHhcCCc---cceeeEEEEcc
Confidence            99999987632   22233555543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.88  E-value=4.3e-22  Score=170.39  Aligned_cols=207  Identities=14%  Similarity=0.080  Sum_probs=144.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      +|+||||||+|+||++++++|+++|   ++|++.+|+.+......+.+   +..+.++.+|++|.+++.++++.    ++
T Consensus        31 gk~vlVTGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           31 GRAAVVTGGASGIGLATATEFARRG---ARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999   89999999876655544332   45688899999999998777653    46


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hcc-CceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENK-ENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|+|||+||.....    .+..+++..+++|+.+++ ++++++.    +.+ ..+||++||...+.+.          .
T Consensus       108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  176 (301)
T 3tjr_A          108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSI-HAVEAFLPRLLEQGTGGHIAFTASFAGLVPN----------A  176 (301)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHCSCEEEEEECCGGGTSCC----------T
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHH-HHHHHHHHHHHhcCCCcEEEEeCchhhcCCC----------C
Confidence            899999999986432    223345678999999986 7777763    333 4599999999876432          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHH----HHhcCCceEeec--Cccc
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDS----VLSKGEKVEFFH--DECR  213 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~  213 (320)
                      +...|+.||...+.+.+.+       +.++.+++||.|..+-..         .....    ......+...++  ....
T Consensus       177 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (301)
T 3tjr_A          177 GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVS---------NSERIRGADYGMSATPEGAFGPLPTQD  247 (301)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHH---------HHHHHC---------------------
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccc---------ccccccchhhccccChhhhcccccccc
Confidence            4678999999999877654       345678999988654210         00000    000011111111  1234


Q ss_pred             CceeHHHHHHHHHHHHhhh
Q 020880          214 CPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~  232 (320)
                      .+++++|+|++++.+++.+
T Consensus       248 ~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          248 ESVSADDVARLTADAILAN  266 (301)
T ss_dssp             -CCCHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHhcC
Confidence            6899999999999999873

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.88  E-value=1e-21  Score=165.83  Aligned_cols=222  Identities=14%  Similarity=0.096  Sum_probs=155.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHHh---C
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALKF---G   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~---~   75 (320)
                      .+|++|||||+|.||.+++++|+++|   ++|++.+|+.+........+   +..+.++.+|++|.+++.++++.+   +
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAG---AHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999   89999999987765544432   467888999999999888777543   5


Q ss_pred             CCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++|++||+||......    ..++++..+++|+.+++ ++++++    ++.+..+||++||...+.+          ..+
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~g~Iv~isS~~~~~~----------~~~  177 (275)
T 4imr_A          109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTV-DMLQSALPKMVARKWGRVVSIGSINQLRP----------KSV  177 (275)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCcEEEEECCHHhCCC----------CCC
Confidence            8999999999754321    23345677899999986 777776    3445569999999987652          234


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.||...+.+.+.+       +.++.+++||.|..+..... .... ............+       ...+...+|
T Consensus       178 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~-~~~~~~~~~~~~p-------~~r~~~ped  248 (275)
T 4imr_A          178 VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADR-RAQD-PEGWDEYVRTLNW-------MGRAGRPEE  248 (275)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHH-HHHC-HHHHHHHHHHHST-------TCSCBCGGG
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccc-cccC-hHHHHHHHhhcCc-------cCCCcCHHH
Confidence            567999999999977764       33567799999865421000 0000 0011111110001       123578999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +|++++.++.....  -..+.++++.+|
T Consensus       249 vA~~v~fL~s~~a~--~itG~~i~vdGG  274 (275)
T 4imr_A          249 MVGAALFLASEACS--FMTGETIFLTGG  274 (275)
T ss_dssp             GHHHHHHHHSGGGT--TCCSCEEEESSC
T ss_pred             HHHHHHHHcCcccC--CCCCCEEEeCCC
Confidence            99999999876432  123558888775

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.88  E-value=1.2e-21  Score=165.13  Aligned_cols=226  Identities=13%  Similarity=0.100  Sum_probs=154.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhh---hhCCCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLL---DALPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++..++... .+...   ...+..+.++.+|++|++++.++++.    
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLG---AKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999   888887765432 22222   23356788899999999988777653    


Q ss_pred             hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhhccC--ceEEEeechhhhcccCCCCcccCCCCC
Q 020880           74 FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTENKE--NLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++++|++||+||......    +.++++..+++|+.+++ ++++++...-.  .++|++||.....         .+..+
T Consensus        94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~g~iv~isS~~~~~---------~~~~~  163 (270)
T 3is3_A           94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQF-FVAREAYRHLTEGGRIVLTSSNTSKD---------FSVPK  163 (270)
T ss_dssp             HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHCCTTCEEEEECCTTTTT---------CCCTT
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHhcCCeEEEEeCchhcc---------CCCCC
Confidence            468999999999865422    33456788999999996 88887765432  3999999976321         11234


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCC------CCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISP------VPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                      ...|+.+|...+.+.+.+       +.++..++||.|..+.....      ..................+       ...
T Consensus       164 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r  236 (270)
T 3is3_A          164 HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP-------LHR  236 (270)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHST-------TCS
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCC-------CCC
Confidence            678999999999977754       35678899999987642100      0000001111111111111       234


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +.+.+|+|++++.++.....  -..+.++++.+|.
T Consensus       237 ~~~p~dvA~~v~~L~s~~~~--~itG~~i~vdGG~  269 (270)
T 3is3_A          237 NGWPQDVANVVGFLVSKEGE--WVNGKVLTLDGGA  269 (270)
T ss_dssp             CBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTTC
T ss_pred             CCCHHHHHHHHHHHcCCccC--CccCcEEEeCCCC
Confidence            68899999999999865432  1235589998864

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.88  E-value=1.9e-21  Score=166.24  Aligned_cols=226  Identities=15%  Similarity=0.084  Sum_probs=155.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC------------Chhhh---hhhCCCcceEEEeeCCCccc
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP------------LPQLL---LDALPHSFVFFDVDLKSGSG   66 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~------------~~~~~---~~~~~~~~~~~~~Dl~d~~~   66 (320)
                      .+|++|||||+|.||.+++++|+++|   ++|++++|+++            .....   ....+..+.++.+|++|+++
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREG---ADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA  103 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            36899999999999999999999999   89998888732            11111   12234678889999999998


Q ss_pred             HHHHHH----HhCCCCEEEECCCccCccc-----cccCchhhhhccccccHHHHHhhhhh----c-cCceEEEeechhhh
Q 020880           67 FDAVAL----KFGQPDVVVNCAALSVPRV-----CENDPDSAMSINVPSSLVNWLSSFTE----N-KENLLIHLSTDQVY  132 (320)
Q Consensus        67 ~~~~~~----~~~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~~~l~~~~~----~-~~~~~v~~Ss~~vy  132 (320)
                      +.++++    .++++|++||+||......     +.++++..+++|+.+++ ++++++..    . +..+||++||...+
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~~g~Iv~isS~~~~  182 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAW-ITARVAIPHIMAGKRGGSIVFTSSIGGL  182 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence            877765    4468999999999764422     33455788999999986 77776543    2 24599999999876


Q ss_pred             cccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCC---------CCCCChHHHHH
Q 020880          133 EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISP---------VPKSLPIQWID  196 (320)
Q Consensus       133 ~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~---------~~~~~~~~~~~  196 (320)
                      .+.          .+...|+.+|...+.+.+.+       +.++..++||.|..+.....         ...........
T Consensus       183 ~~~----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (299)
T 3t7c_A          183 RGA----------ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQV  252 (299)
T ss_dssp             SCC----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHH
T ss_pred             cCC----------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHH
Confidence            432          23678999999999877764       34567899999987753210         00000000000


Q ss_pred             H-HHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          197 S-VLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       197 ~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      . ......        ...+...+|+|++++.++.....  -..+.++++.+|..+
T Consensus       253 ~~~~~~~~--------p~r~~~pedvA~~v~fL~s~~a~--~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          253 ASRQMHVL--------PIPYVEPADISNAILFLVSDDAR--YITGVSLPVDGGALL  298 (299)
T ss_dssp             HHHHHSSS--------SCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTGGG
T ss_pred             Hhhhhccc--------CcCCCCHHHHHHHHHHHhCcccc--cCcCCEEeeCCCccc
Confidence            0 000000        13478999999999999876432  123559999887543

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.88  E-value=1.2e-21  Score=164.94  Aligned_cols=217  Identities=16%  Similarity=0.133  Sum_probs=151.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      .+|+||||||+|+||++++++|+++|   ++|+++.|+.+...       ....++.+|++|++++.++++.    ++++
T Consensus        13 ~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (269)
T 3vtz_A           13 TDKVAIVTGGSSGIGLAVVDALVRYG---AKVVSVSLDEKSDV-------NVSDHFKIDVTNEEEVKEAVEKTTKKYGRI   82 (269)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCC--CT-------TSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCchhcc-------CceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999   89999999865432       2456789999999988777653    4689


Q ss_pred             CEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |+|||+||......    ..++++..+++|+.+++ ++++++.    +.+..+||++||...+...          .+..
T Consensus        83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  151 (269)
T 3vtz_A           83 DILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSY-LMAKYTIPVMLAIGHGSIINIASVQSYAAT----------KNAA  151 (269)
T ss_dssp             CEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSBC----------TTCH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCCEEEEECchhhccCC----------CCCh
Confidence            99999999865422    22334567889999986 7776654    3455699999999987643          2367


Q ss_pred             hHHHHHHHHHHHHHHH------cCCeeEEeecccccCCCCCC------CCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          150 VYGKSKVAAEKFIYEK------CSNFAILRSSIIYGPQTISP------VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~------~~~~~ilR~~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      .|+.||...+.+.+.+      +.++.+++||.|.++.....      .........+.. .....       ....+.+
T Consensus       152 ~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------p~~r~~~  223 (269)
T 3vtz_A          152 AYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEE-WGRQH-------PMGRIGR  223 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHH-HHHHS-------TTSSCBC
T ss_pred             hHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHH-HHhcC-------CCCCCcC
Confidence            8999999999987764      23456799999977531000      000000011111 11111       2345789


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ++|+|++++.++.....  ...+.++++.+|.
T Consensus       224 pedvA~~v~~L~s~~~~--~itG~~i~vdGG~  253 (269)
T 3vtz_A          224 PEEVAEVVAFLASDRSS--FITGACLTVDGGL  253 (269)
T ss_dssp             HHHHHHHHHHHHSGGGT--TCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHhCCccC--CCcCcEEEECCCc
Confidence            99999999999876432  1235699999874

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.88  E-value=3.1e-22  Score=164.84  Aligned_cols=194  Identities=13%  Similarity=0.087  Sum_probs=142.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhC-CCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFG-QPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~~d~Vi   81 (320)
                      ||+||||||+|+||++++++|+++|   ++|++.+|++++.....+.++..+.++.+|++|.+++.++++.+. .+|+||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv   77 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEG---KATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVV   77 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEE
Confidence            5789999999999999999999999   889999999877777766666778899999999999999988552 349999


Q ss_pred             ECCCccCccc----cccCchhhhhccccccHHHHHhhhhhc----cCceEEEeechhhhcccCCCCcccCCCCCcchHHH
Q 020880           82 NCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTEN----KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGK  153 (320)
Q Consensus        82 h~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~  153 (320)
                      |+||......    ..++++..+++|+.+++ ++++++...    +. ++|++||...+.+.          .+...|+.
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~-~iv~isS~~~~~~~----------~~~~~Y~a  145 (230)
T 3guy_A           78 HSAGSGYFGLLQEQDPEQIQTLIENNLSSAI-NVLRELVKRYKDQPV-NVVMIMSTAAQQPK----------AQESTYCA  145 (230)
T ss_dssp             ECCCCCCCSCGGGSCHHHHHHHHHHHHHHHH-HHHHHHHHHHTTSCC-EEEEECCGGGTSCC----------TTCHHHHH
T ss_pred             EeCCcCCCCccccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCC-eEEEEeecccCCCC----------CCCchhHH
Confidence            9999764322    22345678899999986 777776542    33 89999999877532          24678999


Q ss_pred             HHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHH
Q 020880          154 SKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL  226 (320)
Q Consensus       154 sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  226 (320)
                      +|...+.+.+.+       +.++..++||.+..+-..             . .....       ....+.+.+|+|++++
T Consensus       146 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-------------~-~~~~~-------~~~~~~~~~dvA~~i~  204 (230)
T 3guy_A          146 VKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWE-------------T-SGKSL-------DTSSFMSAEDAALMIH  204 (230)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------------------------------------CCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHH-------------h-cCCCC-------CcccCCCHHHHHHHHH
Confidence            999999987764       345677999988654211             0 00000       1234789999999999


Q ss_pred             HHHhhh
Q 020880          227 ALTNRW  232 (320)
Q Consensus       227 ~~~~~~  232 (320)
                      .++.++
T Consensus       205 ~l~~~~  210 (230)
T 3guy_A          205 GALANI  210 (230)
T ss_dssp             HHCCEE
T ss_pred             HHHhCc
Confidence            998764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.88  E-value=1.1e-21  Score=166.17  Aligned_cols=228  Identities=14%  Similarity=0.085  Sum_probs=153.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-------------CChhhhh---hhCCCcceEEEeeCCCcc
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-------------PLPQLLL---DALPHSFVFFDVDLKSGS   65 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-------------~~~~~~~---~~~~~~~~~~~~Dl~d~~   65 (320)
                      .+|++|||||+|.||.+++++|+++|   ++|++.+|+.             +......   ...+..+.++.+|++|++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEG---ADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD   86 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcC---CEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            35799999999999999999999999   8899888842             1122211   223456888999999999


Q ss_pred             cHHHHHHH----hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hcc-CceEEEeechhhh
Q 020880           66 GFDAVALK----FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENK-ENLLIHLSTDQVY  132 (320)
Q Consensus        66 ~~~~~~~~----~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~-~~~~v~~Ss~~vy  132 (320)
                      ++.++++.    ++++|++||+||.....    .+.++++..+++|+.+++ ++++++.    +.+ ..+||++||...+
T Consensus        87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~~g~iv~isS~~~~  165 (277)
T 3tsc_A           87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTW-NTVMAGAPRIIEGGRGGSIILISSAAGM  165 (277)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHH-HHHHHHHHHHHhcCCCCEEEEEccHhhC
Confidence            98777654    46899999999986542    233456778999999986 7766643    333 3489999999876


Q ss_pred             cccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCce
Q 020880          133 EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKV  205 (320)
Q Consensus       133 ~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (320)
                      ...          .+...|+.||...+.+.+.+       +.++..++|+.|..+-..    ..................
T Consensus       166 ~~~----------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~----~~~~~~~~~~~~~~~~~~  231 (277)
T 3tsc_A          166 KMQ----------PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGS----GDMVTAVGQAMETNPQLS  231 (277)
T ss_dssp             SCC----------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGS----HHHHHHHHHHHHTCGGGT
T ss_pred             CCC----------CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCccc----chhhhhhhhcccccHHHH
Confidence            532          23668999999999987754       345678999999776421    000000111100001000


Q ss_pred             EeecC-cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          206 EFFHD-ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       206 ~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ..... ....+.+.+|+|++++.++.....  ...+.++++.+|.
T Consensus       232 ~~~~~~~p~r~~~pedvA~~v~~L~s~~~~--~itG~~i~vdGG~  274 (277)
T 3tsc_A          232 HVLTPFLPDWVAEPEDIADTVCWLASDESR--KVTAAQIPVDQGS  274 (277)
T ss_dssp             TTTCCSSSCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTG
T ss_pred             HHhhhccCCCCCCHHHHHHHHHHHhCcccc--CCcCCEEeeCCCc
Confidence            00011 112378999999999999876432  1235589998874

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.88  E-value=4.5e-22  Score=167.05  Aligned_cols=196  Identities=15%  Similarity=0.159  Sum_probs=141.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      .+|+||||||+|+||++++++|+++|   ++|++++|+.++.....+.   .+..+.++.+|++|++++.++++.    +
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLG---ARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            35899999999999999999999999   8999999987665544332   245688899999999998877654    4


Q ss_pred             CCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +++|+|||+||....     ..+..+++..+++|+.+++ ++++++.    +.+..+||++||...+.+          .
T Consensus       105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~  173 (262)
T 3rkr_A          105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPY-LLLRAFAPAMIAAKRGHIINISSLAGKNP----------V  173 (262)
T ss_dssp             SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCCEEEEECSSCSSCC----------C
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhCCCceEEEEechhhcCC----------C
Confidence            689999999997322     1223345678899999986 7777653    355569999999887643          2


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+.+.+       +.++.+++||.|..+-...         ..     ...       ....++..
T Consensus       174 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---------~~-----~~~-------~~~~~~~p  232 (262)
T 3rkr_A          174 ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG---------LS-----AKK-------SALGAIEP  232 (262)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------CCCH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc---------cc-----ccc-------ccccCCCH
Confidence            34678999999999877654       3567889999886543210         00     000       11236799


Q ss_pred             HHHHHHHHHHHhhh
Q 020880          219 RDVVKIILALTNRW  232 (320)
Q Consensus       219 ~D~a~~~~~~~~~~  232 (320)
                      +|+|++++.++...
T Consensus       233 ~dvA~~v~~l~s~~  246 (262)
T 3rkr_A          233 DDIADVVALLATQA  246 (262)
T ss_dssp             HHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHhcCc
Confidence            99999999998764

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.88  E-value=3.9e-21  Score=161.89  Aligned_cols=219  Identities=15%  Similarity=0.110  Sum_probs=153.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-Chhhhh---hhCCCcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-LPQLLL---DALPHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      .+|++|||||+|+||++++++|+++|   ++|++..++.. ..+...   ...+..+.++.+|++|+++++++++    .
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEG---AAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35799999999999999999999999   88888866542 232222   2235577889999999998877665    4


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++++|++||+||.....    .+.++++..+++|+.+++ .+++++...  +..++|++||......         +..+
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~m~~~g~iv~isS~~~~~~---------~~~~  176 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPF-VAIRSASRHLGDGGRIITIGSNLAELV---------PWPG  176 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHCCTTCEEEEECCGGGTCC---------CSTT
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHhcCCEEEEEeChhhccC---------CCCC
Confidence            46899999999986432    233455778899999996 788777653  2349999998654321         1234


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+.+.+       +.++.+++|+.|..+.....  .... ..+   . ...+.       ..+...+|
T Consensus       177 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~--~~~~-~~~---~-~~~~~-------~r~~~ped  242 (271)
T 3v2g_A          177 ISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD--GDHA-EAQ---R-ERIAT-------GSYGEPQD  242 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSS--CSSH-HHH---H-HTCTT-------SSCBCHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccccc--chhH-HHH---H-hcCCC-------CCCCCHHH
Confidence            678999999999977654       35678899999988754211  1111 111   1 11121       23678999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|++++.++.....  -..+.++++.+|.
T Consensus       243 vA~~v~fL~s~~~~--~itG~~i~vdGG~  269 (271)
T 3v2g_A          243 IAGLVAWLAGPQGK--FVTGASLTIDGGA  269 (271)
T ss_dssp             HHHHHHHHHSGGGT--TCCSCEEEESTTT
T ss_pred             HHHHHHHHhCcccC--CccCCEEEeCcCc
Confidence            99999999865322  1235589998764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.88  E-value=1.8e-21  Score=168.31  Aligned_cols=219  Identities=16%  Similarity=0.128  Sum_probs=154.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEec-CCCCChhhhhh----hCCCcceEEEeeCCCcc-----------
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLD----ALPHSFVFFDVDLKSGS-----------   65 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~-r~~~~~~~~~~----~~~~~~~~~~~Dl~d~~-----------   65 (320)
                      .+|++|||||+|+||.++++.|+++|   ++|++++ |+.+......+    ..+..+.++.+|++|++           
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G---~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------C
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccc
Confidence            35799999999999999999999999   8999998 87655444333    22456888999999999           


Q ss_pred             ------cHHHHHH----HhCCCCEEEECCCccCccc----c--------------ccCchhhhhccccccHHHHHhhhh-
Q 020880           66 ------GFDAVAL----KFGQPDVVVNCAALSVPRV----C--------------ENDPDSAMSINVPSSLVNWLSSFT-  116 (320)
Q Consensus        66 ------~~~~~~~----~~~~~d~Vih~a~~~~~~~----~--------------~~~~~~~~~~n~~~~~~~~l~~~~-  116 (320)
                            ++.++++    .++++|+|||+||......    .              ..+++..+++|+.+++ .+++++. 
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~  200 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPY-FLIKAFAH  200 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHH-HHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence                  7777665    3468999999999764321    1              2334577899999986 7766664 


Q ss_pred             ---hcc------CceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccC
Q 020880          117 ---ENK------ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGP  180 (320)
Q Consensus       117 ---~~~------~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~  180 (320)
                         +.+      ..+||++||...+.+.          .+...|+.+|...+.+.+.+       +.++.+++|+.|..+
T Consensus       201 ~m~~~~~~~~~~~g~IV~isS~~~~~~~----------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~  270 (328)
T 2qhx_A          201 RVAGTPAKHRGTNYSIINMVDAMTNQPL----------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV  270 (328)
T ss_dssp             HHHHSCGGGSCSCEEEEEECCTTTTSCC----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred             HHHhcCCcCCCCCcEEEEECchhhccCC----------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCC
Confidence               333      4699999999876432          24678999999999977764       346778999999876


Q ss_pred             CCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      . ..     . ........ ...++.      ..+...+|+|++++.++.....  ...+.++++.+|..
T Consensus       271 ~-~~-----~-~~~~~~~~-~~~p~~------~r~~~pedvA~~v~~l~s~~~~--~itG~~i~vdGG~~  324 (328)
T 2qhx_A          271 D-DM-----P-PAVWEGHR-SKVPLY------QRDSSAAEVSDVVIFLCSSKAK--YITGTCVKVDGGYS  324 (328)
T ss_dssp             C-CS-----C-HHHHHHHH-TTCTTT------TSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTGG
T ss_pred             c-cc-----c-HHHHHHHH-hhCCCC------CCCCCHHHHHHHHHHHhCcccc--CccCcEEEECCCcc
Confidence            5 11     1 12222222 222211      0367899999999999865321  12355899988754

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.88  E-value=3.9e-21  Score=163.46  Aligned_cols=227  Identities=13%  Similarity=0.075  Sum_probs=154.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC----------------Chhhhh---hhCCCcceEEEeeCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP----------------LPQLLL---DALPHSFVFFDVDLK   62 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~----------------~~~~~~---~~~~~~~~~~~~Dl~   62 (320)
                      .+|++|||||+|.||.+++++|+++|   ++|++++|+++                ......   ...+..+.++.+|++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   86 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEG---ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR   86 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence            36899999999999999999999999   89999888732                111111   122456888999999


Q ss_pred             CcccHHHHHH----HhCCCCEEEECCCccCccc-----cccCchhhhhccccccHHHHHhhhhh----cc-CceEEEeec
Q 020880           63 SGSGFDAVAL----KFGQPDVVVNCAALSVPRV-----CENDPDSAMSINVPSSLVNWLSSFTE----NK-ENLLIHLST  128 (320)
Q Consensus        63 d~~~~~~~~~----~~~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~~~l~~~~~----~~-~~~~v~~Ss  128 (320)
                      |++++.++++    .++++|++||+||......     +.++++..+++|+.+++ ++++++..    .+ ..+||++||
T Consensus        87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~~g~iv~isS  165 (286)
T 3uve_A           87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVW-KTVKAGVPHMIAGGRGGSIILTSS  165 (286)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhCCCCcEEEEECc
Confidence            9999877765    3468999999999864422     33455678999999986 77776643    22 348999999


Q ss_pred             hhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCC---------CCCCChH
Q 020880          129 DQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISP---------VPKSLPI  192 (320)
Q Consensus       129 ~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~---------~~~~~~~  192 (320)
                      ...+.+.          .+...|+.+|...+.+.+.+       +.++.+++||.|..+.....         ...... 
T Consensus       166 ~~~~~~~----------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-  234 (286)
T 3uve_A          166 VGGLKAY----------PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGP-  234 (286)
T ss_dssp             GGGTSCC----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCH-
T ss_pred             hhhccCC----------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccch-
Confidence            9876432          23668999999999977764       24567899999987643210         000000 


Q ss_pred             HHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          193 QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      ..+..........      ...+.+.+|+|++++.++.....  -..+.++++.+|..+
T Consensus       235 ~~~~~~~~~~~~~------p~r~~~p~dvA~~v~fL~s~~a~--~itG~~i~vdGG~~l  285 (286)
T 3uve_A          235 DDMAPICQMFHTL------PIPWVEPIDISNAVLFFASDEAR--YITGVTLPIDAGSCL  285 (286)
T ss_dssp             HHHHHHHHTTCSS------SCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTGGG
T ss_pred             hhHHHHHHhhhcc------CCCcCCHHHHHHHHHHHcCcccc--CCcCCEEeECCcccc
Confidence            0000100001111      13578999999999999875432  123559999887543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.88  E-value=4.2e-21  Score=161.68  Aligned_cols=196  Identities=14%  Similarity=0.118  Sum_probs=143.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh--CCCcceEEEeeCCCcccHHHHHHHh----
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA--LPHSFVFFDVDLKSGSGFDAVALKF----   74 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (320)
                      +++|+||||||+|+||++++++|+++|...++|++++|+.+....+.+.  ...++.++.+|++|.+++.++++.+    
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            3578999999999999999999999983224788899987665433221  1346888999999999988877643    


Q ss_pred             C--CCCEEEECCCccC-c----cccccCchhhhhccccccHHHHHhhhhhc----------c-----CceEEEeechhhh
Q 020880           75 G--QPDVVVNCAALSV-P----RVCENDPDSAMSINVPSSLVNWLSSFTEN----------K-----ENLLIHLSTDQVY  132 (320)
Q Consensus        75 ~--~~d~Vih~a~~~~-~----~~~~~~~~~~~~~n~~~~~~~~l~~~~~~----------~-----~~~~v~~Ss~~vy  132 (320)
                      +  ++|+|||+||... .    .....+++..+++|+.+++ ++++++...          +     ..+||++||...+
T Consensus        99 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  177 (267)
T 1sny_A           99 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPI-MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  177 (267)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             CCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHH-HHHHHHHHHHhhcccccccccccCCCceEEEEeccccc
Confidence            3  6999999999765 1    1223345678899999986 777776542          2     3589999999887


Q ss_pred             cccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCce
Q 020880          133 EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKV  205 (320)
Q Consensus       133 ~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (320)
                      ....       +..+...|+.+|...+.+++.+       +.++.++||+.|..+-..    .                 
T Consensus       178 ~~~~-------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~-----------------  229 (267)
T 1sny_A          178 IQGN-------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG----S-----------------  229 (267)
T ss_dssp             STTC-------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC----T-----------------
T ss_pred             ccCC-------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCC----C-----------------
Confidence            5421       1124668999999999987654       456788999998654321    0                 


Q ss_pred             EeecCcccCceeHHHHHHHHHHHHhhh
Q 020880          206 EFFHDECRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       206 ~~~~~~~~~~i~v~D~a~~~~~~~~~~  232 (320)
                             ..++..+|+|+.++.++...
T Consensus       230 -------~~~~~~~~~a~~~~~~~~~~  249 (267)
T 1sny_A          230 -------SAPLDVPTSTGQIVQTISKL  249 (267)
T ss_dssp             -------TCSBCHHHHHHHHHHHHHHC
T ss_pred             -------CCCCCHHHHHHHHHHHHHhc
Confidence                   02477899999999999864

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.88  E-value=1.3e-21  Score=168.65  Aligned_cols=226  Identities=12%  Similarity=0.086  Sum_probs=153.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC------------hhhh---hhhCCCcceEEEeeCCCccc
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL------------PQLL---LDALPHSFVFFDVDLKSGSG   66 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~------------~~~~---~~~~~~~~~~~~~Dl~d~~~   66 (320)
                      .+|++|||||+|+||+++++.|+++|   ++|++++|+...            ....   ....+..+.++.+|++|+++
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G---~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  121 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDG---ADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS  121 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            35799999999999999999999999   888888775221            1111   12234568889999999998


Q ss_pred             HHHHHHH----hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh----cc-CceEEEeechhhhc
Q 020880           67 FDAVALK----FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE----NK-ENLLIHLSTDQVYE  133 (320)
Q Consensus        67 ~~~~~~~----~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~-~~~~v~~Ss~~vy~  133 (320)
                      +.++++.    ++++|+|||+||.....    .+.++++..+++|+.+++ ++++++..    .+ ..+||++||...+.
T Consensus       122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~~g~Iv~isS~~~~~  200 (317)
T 3oec_A          122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAW-HACRAVLPSMIERGQGGSVIFVSSTVGLR  200 (317)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence            8777653    46899999999986542    233455678899999986 77776632    32 34899999988764


Q ss_pred             ccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCC---------CCCCCChHHHHHH
Q 020880          134 GVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTIS---------PVPKSLPIQWIDS  197 (320)
Q Consensus       134 ~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~~~  197 (320)
                      ..          .+...|+.||...+.+.+.+       +.++.+++|+.|.++....         ....... .....
T Consensus       201 ~~----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~  269 (317)
T 3oec_A          201 GA----------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTR-EDAAE  269 (317)
T ss_dssp             CC----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCH-HHHHH
T ss_pred             CC----------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccch-hHHHH
Confidence            32          23678999999999977764       3456789999998763210         0000000 00011


Q ss_pred             HHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          198 VLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ......      .....|++++|+|+++++++.....  ...+.++++.+|..
T Consensus       270 ~~~~~~------~~p~~~~~pedvA~av~fL~s~~a~--~itG~~i~vdGG~~  314 (317)
T 3oec_A          270 LFSQLT------LLPIPWVEPEDVSNAVAWLASDEAR--YIHGAAIPVDGGQL  314 (317)
T ss_dssp             HHTTTC------SSSSSSBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTTGG
T ss_pred             HHhhhc------cCCCCCCCHHHHHHHHHHHcCCccc--CCCCCEEEECcchh
Confidence            110110      1114688999999999999865432  12355999988753

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.88  E-value=2.2e-21  Score=165.08  Aligned_cols=219  Identities=16%  Similarity=0.170  Sum_probs=152.9

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-CChhhhhh----hCCCcceEEEeeCCC----cccHHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLD----ALPHSFVFFDVDLKS----GSGFDAVA   71 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-~~~~~~~~----~~~~~~~~~~~Dl~d----~~~~~~~~   71 (320)
                      |.+|++|||||+|+||++++++|+++|   ++|++++|+. +....+.+    ..+..+.++.+|++|    ++++.+++
T Consensus        21 l~~k~~lVTGas~gIG~aia~~L~~~G---~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~   97 (288)
T 2x9g_A           21 MEAPAAVVTGAAKRIGRAIAVKLHQTG---YRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII   97 (288)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHHT---CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence            446899999999999999999999999   8999999987 54433332    234567889999999    88777666


Q ss_pred             H----HhCCCCEEEECCCccCcc--------------ccccCchhhhhccccccHHHHHhhhhh----cc------CceE
Q 020880           72 L----KFGQPDVVVNCAALSVPR--------------VCENDPDSAMSINVPSSLVNWLSSFTE----NK------ENLL  123 (320)
Q Consensus        72 ~----~~~~~d~Vih~a~~~~~~--------------~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~------~~~~  123 (320)
                      +    .++++|+|||+||.....              ....+++..+++|+.+++ .+++++..    .+      ..+|
T Consensus        98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~~~~~~g~i  176 (288)
T 2x9g_A           98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPF-LLTMSFAQRQKGTNPNCTSSNLSI  176 (288)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHH-HHHHHHHHHC--------CCCEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHhhcCCCCCCCCeEE
Confidence            5    346899999999976432              122234567889999986 77666643    22      3589


Q ss_pred             EEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHH
Q 020880          124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWID  196 (320)
Q Consensus       124 v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  196 (320)
                      |++||...+.+.          .+...|+.+|...+.+.+.+       +.++.+++|+.|.++. . .    .. ....
T Consensus       177 v~isS~~~~~~~----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~----~~-~~~~  239 (288)
T 2x9g_A          177 VNLCDAMVDQPC----------MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M----GE-EEKD  239 (288)
T ss_dssp             EEECCTTTTSCC----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S----CH-HHHH
T ss_pred             EEEecccccCCC----------CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c----Ch-HHHH
Confidence            999999876532          24678999999998877654       3466789999998875 2 1    11 1122


Q ss_pred             HHHhcCCceEeecCcccCc-eeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          197 SVLSKGEKVEFFHDECRCP-VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ... ...++       ..+ ...+|+|++++.++.....  ...+.++++.+|..
T Consensus       240 ~~~-~~~p~-------~r~~~~pedvA~~v~~l~s~~~~--~itG~~i~vdGG~~  284 (288)
T 2x9g_A          240 KWR-RKVPL-------GRREASAEQIADAVIFLVSGSAQ--YITGSIIKVDGGLS  284 (288)
T ss_dssp             HHH-HTCTT-------TSSCCCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTGG
T ss_pred             HHH-hhCCC-------CCCCCCHHHHHHHHHHHhCcccc--CccCCEEEECcchh
Confidence            211 11111       124 7899999999999875322  12355888887743

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.88  E-value=9.3e-22  Score=164.04  Aligned_cols=204  Identities=14%  Similarity=0.115  Sum_probs=149.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----CCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----GQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~~d   78 (320)
                      +|+||||||+|+||++++++|+++|   ++|++++|+.++..         -..+.+|++|.+++.++++.+    +++|
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~~---------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD   89 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKS---WNTISIDFRENPNA---------DHSFTIKDSGEEEIKSVIEKINSKSIKVD   89 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCTTS---------SEEEECSCSSHHHHHHHHHHHHTTTCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCccccc---------ccceEEEeCCHHHHHHHHHHHHHHcCCCC
Confidence            5799999999999999999999999   89999999876532         124788999999988877654    5789


Q ss_pred             EEEECCCccCcc-----ccccCchhhhhccccccHHHHHhhhhhcc--CceEEEeechhhhcccCCCCcccCCCCCcchH
Q 020880           79 VVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLSSFTENK--ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVY  151 (320)
Q Consensus        79 ~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~~~~~~~--~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y  151 (320)
                      +|||+||.....     ....+++..+++|+.+++ ++++++...-  -.+||++||...+.+.          .+...|
T Consensus        90 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~Y  158 (251)
T 3orf_A           90 TFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAF-ASAHIGAKLLNQGGLFVLTGASAALNRT----------SGMIAY  158 (251)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHH-HHHHHHHHHEEEEEEEEEECCGGGGSCC----------TTBHHH
T ss_pred             EEEECCccCCCCCcccccCHHHHHHHHHHHhHHHH-HHHHHHHHhhccCCEEEEEechhhccCC----------CCCchh
Confidence            999999975332     223455678899999996 8888876532  2389999999876432          346789


Q ss_pred             HHHHHHHHHHHHHHcC---------CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          152 GKSKVAAEKFIYEKCS---------NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       152 ~~sK~~~e~~~~~~~~---------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      +.+|...+.+.+.+..         ++.+++|+.|..+.             ..... ...       ....+++.+|+|
T Consensus       159 ~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~-------------~~~~~-~~~-------~~~~~~~~~dva  217 (251)
T 3orf_A          159 GATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT-------------NRKYM-SDA-------NFDDWTPLSEVA  217 (251)
T ss_dssp             HHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH-------------HHHHC-TTS-------CGGGSBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc-------------hhhhc-ccc-------cccccCCHHHHH
Confidence            9999999998887543         34678888885532             11111 111       234578999999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      ++++.++..+.. ....+.++++.+++..
T Consensus       218 ~~i~~l~~~~~~-~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          218 EKLFEWSTNSDS-RPTNGSLVKFETKSKV  245 (251)
T ss_dssp             HHHHHHHHCGGG-CCCTTCEEEEEEETTE
T ss_pred             HHHHHHhcCccc-cCCcceEEEEecCCcc
Confidence            999999987221 1223558888776543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.88  E-value=7.4e-22  Score=165.73  Aligned_cols=223  Identities=15%  Similarity=0.082  Sum_probs=150.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      ++|+++||||+|+||++++++|+++|   ++|+++.|+.+......+.   .+..+.++.+|++|++++.++++    .+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEG---TAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999   8999999986555443332   23467889999999998776665    44


Q ss_pred             CCCCEEEECCCcc-Cc----cccccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALS-VP----RVCENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~-~~----~~~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +++|+|||+||.. ..    .....+++..+++|+.+++ ++++++..    .+..+||++||...+.+.          
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  151 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAF-HVLKAVSRQMITQNYGRIVNTASMAGVKGP----------  151 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCHHHHSCC----------
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhcCCcEEEEEcchhhccCC----------
Confidence            6899999999975 22    1123345678899999986 77776643    345699999998876532          


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCC---------CC-CCChHH-HHHHHHhcCCceEe
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISP---------VP-KSLPIQ-WIDSVLSKGEKVEF  207 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~---------~~-~~~~~~-~~~~~~~~~~~~~~  207 (320)
                      .+...|+.+|...+.+.+.+       +.++.+++|+.+..+-....         .. ...... ... .+....+   
T Consensus       152 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p---  227 (262)
T 1zem_A          152 PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQ-QMIGSVP---  227 (262)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHH-HHHHTST---
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHH-HHHhcCC---
Confidence            23568999999998877654       34678899998854421000         00 000000 111 1111111   


Q ss_pred             ecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          208 FHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       208 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                          ...+...+|+|++++.++.....  ...+.++.+.+|
T Consensus       228 ----~~r~~~p~dvA~~v~~l~s~~~~--~itG~~i~vdGG  262 (262)
T 1zem_A          228 ----MRRYGDINEIPGVVAFLLGDDSS--FMTGVNLPIAGG  262 (262)
T ss_dssp             ----TSSCBCGGGSHHHHHHHHSGGGT--TCCSCEEEESCC
T ss_pred             ----CCCCcCHHHHHHHHHHHcCchhc--CcCCcEEecCCC
Confidence                12367899999999999875322  123447777654

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.87  E-value=1.8e-21  Score=161.84  Aligned_cols=204  Identities=14%  Similarity=0.121  Sum_probs=145.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      ++|++|||||+|+||++++++|+++|   ++|+++.|+.+....+.+.   .+..+.++.+|++|++++.++++.    +
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEG---AAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999   8999999986655443332   244678899999999988777653    4


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|+|||+||.....    .+..+++..+++|+.+++ ++++++.    +.+ .+||++||...+.+.          .
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----------~  150 (247)
T 2jah_A           83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLM-YMTRAALPHLLRSK-GTVVQMSSIAGRVNV----------R  150 (247)
T ss_dssp             SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHT-CEEEEECCGGGTCCC----------T
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHCC-CEEEEEccHHhcCCC----------C
Confidence            6899999999976432    122345677899999986 7777664    344 699999998876432          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+.+.+       +.++.+++|+.+..+-.... ..   . ........   .  +  +...++..+
T Consensus       151 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~---~-~~~~~~~~---~--~--~~~~~~~pe  218 (247)
T 2jah_A          151 NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHI-TH---T-ATKEMYEQ---R--I--SQIRKLQAQ  218 (247)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGC-CC---H-HHHHHHHH---H--T--TTSCCBCHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcc-cc---h-hhHHHHHh---c--c--cccCCCCHH
Confidence            3668999999998876653       45788999999987642111 00   0 11111110   0  0  111258999


Q ss_pred             HHHHHHHHHHhhh
Q 020880          220 DVVKIILALTNRW  232 (320)
Q Consensus       220 D~a~~~~~~~~~~  232 (320)
                      |+|++++.++..+
T Consensus       219 dvA~~v~~l~s~~  231 (247)
T 2jah_A          219 DIAEAVRYAVTAP  231 (247)
T ss_dssp             HHHHHHHHHHHSC
T ss_pred             HHHHHHHHHhCCC
Confidence            9999999998763

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.87  E-value=1.2e-21  Score=164.99  Aligned_cols=202  Identities=15%  Similarity=0.170  Sum_probs=141.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC--CcceEEEeeCCCcccHHHHHHHh----CCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--HSFVFFDVDLKSGSGFDAVALKF----GQP   77 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~----~~~   77 (320)
                      |++|||||+|+||++++++|+++|   ++|+++.|+.++...+.+.+.  ..+.++.+|++|++++.++++.+    +++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   98 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAG---WSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATL   98 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999   899999998766555444332  36778999999999998888643    568


Q ss_pred             CEEEECCCccCc--c---ccccCchhhhhccccccHHHHHhhh----hhccCc-eEEEeechhhhcccCCCCcccCCCCC
Q 020880           78 DVVVNCAALSVP--R---VCENDPDSAMSINVPSSLVNWLSSF----TENKEN-LLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        78 d~Vih~a~~~~~--~---~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~-~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      |+|||+||....  +   ....+++..+++|+.+++ ++.+++    ++.+.. +||++||...+.+.          .+
T Consensus        99 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~----------~~  167 (272)
T 2nwq_A           99 RGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLL-YSTRLLLPRLIAHGAGASIVNLGSVAGKWPY----------PG  167 (272)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHCTTCEEEEECCGGGTSCC----------TT
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCcEEEEeCCchhccCC----------CC
Confidence            999999997542  1   123345678899999985 555544    455666 99999999876432          23


Q ss_pred             cchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+.+.+.       .++.+++|+.+..+-........  ........           ....++..+|
T Consensus       168 ~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~--~~~~~~~~-----------~~~~~~~ped  234 (272)
T 2nwq_A          168 SHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGD--QARYDKTY-----------AGAHPIQPED  234 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------------------------CCCCBCHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccc--hHHHHHhh-----------ccCCCCCHHH
Confidence            5689999999999888753       45678999999776421000000  00000000           0112478999


Q ss_pred             HHHHHHHHHhhh
Q 020880          221 VVKIILALTNRW  232 (320)
Q Consensus       221 ~a~~~~~~~~~~  232 (320)
                      +|++++.++..+
T Consensus       235 vA~~v~~l~s~~  246 (272)
T 2nwq_A          235 IAETIFWIMNQP  246 (272)
T ss_dssp             HHHHHHHHHTSC
T ss_pred             HHHHHHHHhCCC
Confidence            999999998753

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.87  E-value=2.6e-21  Score=161.76  Aligned_cols=221  Identities=14%  Similarity=0.106  Sum_probs=153.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEe-cCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHHh---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      .+|+++||||+|.||++++++|+++|   ++|+.+ .|+.+.......   ..+..+.++.+|++|.++++.+++.+   
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDG---ALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999   788775 555444433332   22456778899999999887776543   


Q ss_pred             -------CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcc
Q 020880           75 -------GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        75 -------~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                             +.+|++||+||......    ...+.+..+++|+.+++ ++++++...  +..++|++||...+.+.      
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~iv~isS~~~~~~~------  155 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPF-FIIQQALSRLRDNSRIINISSAATRISL------  155 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHTTTEEEEEEEEEECCGGGTSCC------
T ss_pred             hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHH-HHHHHHHHhhCCCCEEEEeCChhhccCC------
Confidence                   13899999999864422    22334567889999996 888887654  33489999999876532      


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                          .+...|+.+|...+.+.+.+       +.++..++|+.+..+-.......    ...........+       ...
T Consensus       156 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~-------~~~  220 (255)
T 3icc_A          156 ----PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSD----PMMKQYATTISA-------FNR  220 (255)
T ss_dssp             ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTS----HHHHHHHHHTST-------TSS
T ss_pred             ----CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhccc----HHHHHhhhccCC-------cCC
Confidence                23678999999999977654       34677899999977653221111    111111212222       234


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +.+++|+|++++.++.....  -..+.++++.+|.
T Consensus       221 ~~~~~dva~~~~~l~s~~~~--~~tG~~i~vdgG~  253 (255)
T 3icc_A          221 LGEVEDIADTAAFLASPDSR--WVTGQLIDVSGGS  253 (255)
T ss_dssp             CBCHHHHHHHHHHHHSGGGT--TCCSCEEEESSST
T ss_pred             CCCHHHHHHHHHHHhCcccC--CccCCEEEecCCe
Confidence            68899999999998865432  1235699998874

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.87  E-value=2e-21  Score=164.74  Aligned_cols=227  Identities=14%  Similarity=0.045  Sum_probs=155.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      .+|++|||||+|.||.+++++|+++|   ++|++..|+.+....+....+..+.++.+|++|++++.++++    .++++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEG---ARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKI   80 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999   899999999777766666666678889999999998777665    34789


Q ss_pred             CEEEECCCccCcccc---------ccCchhhhhccccccHHHHHhhhhhc---cCceEEEeechhhhcccCCCCcccCCC
Q 020880           78 DVVVNCAALSVPRVC---------ENDPDSAMSINVPSSLVNWLSSFTEN---KENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        78 d~Vih~a~~~~~~~~---------~~~~~~~~~~n~~~~~~~~l~~~~~~---~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      |++||+||.......         .+.++..+++|+.+++ ++++++...   +..++|++||...+.+.          
T Consensus        81 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  149 (281)
T 3zv4_A           81 DTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYI-HAVKACLPALVSSRGSVVFTISNAGFYPN----------  149 (281)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEECCGGGTSSS----------
T ss_pred             CEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHH-HHHHHHHHHHHhcCCeEEEEecchhccCC----------
Confidence            999999997543111         1124567889999986 777776432   12499999998876432          


Q ss_pred             CCcchHHHHHHHHHHHHHHH----c--CCeeEEeecccccCCCCCCCCC---CChHH-HHHHHHhcCCceEeecCcccCc
Q 020880          146 APVNVYGKSKVAAEKFIYEK----C--SNFAILRSSIIYGPQTISPVPK---SLPIQ-WIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~----~--~~~~ilR~~~v~G~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                      .+...|+.||...+.+.+.+    +  .++..++||.|..+-.......   ..... .....+....+       ...+
T Consensus       150 ~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~  222 (281)
T 3zv4_A          150 GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLP-------IGRM  222 (281)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCT-------TSSC
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCC-------CCCC
Confidence            23568999999999977764    3  3456799999876532110000   00000 01111111112       2346


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ...+|+|++++.++..+.+. -..+.++++.+|..
T Consensus       223 ~~pedvA~~v~fL~s~~~~~-~itG~~i~vdGG~~  256 (281)
T 3zv4_A          223 PALEEYTGAYVFFATRGDSL-PATGALLNYDGGMG  256 (281)
T ss_dssp             CCGGGGSHHHHHHHSTTTST-TCSSCEEEESSSGG
T ss_pred             CCHHHHHHHHHHhhcccccc-cccCcEEEECCCCc
Confidence            88999999999998733211 12355999988743

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.87  E-value=2.3e-22  Score=167.17  Aligned_cols=205  Identities=15%  Similarity=0.117  Sum_probs=130.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCccc---HHHHHHHhCCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG---FDAVALKFGQPD   78 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~~~d   78 (320)
                      ++|++|||||+|+||++++++|++ |   +.|+++.|+++....+.+  ...+.++.+|+++.++   +.+.++.++++|
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g---~~v~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-D---HIVYALGRNPEHLAALAE--IEGVEPIESDIVKEVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-T---SEEEEEESCHHHHHHHHT--STTEEEEECCHHHHHHTSSSCGGGTTCSCCS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-C---CeEEEEeCCHHHHHHHHh--hcCCcceecccchHHHHHHHHHHHHhcCCCC
Confidence            468999999999999999999987 7   789999998766555444  2457788999988733   333444556899


Q ss_pred             EEEECCCccCccc----cccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           79 VVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        79 ~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      +|||+||......    +..+++..+++|+.+++ ++++++.    +.+ .++|++||...+.+.          .+...
T Consensus        78 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~~~~~~~~-g~iv~isS~~~~~~~----------~~~~~  145 (245)
T 3e9n_A           78 TLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPA-ELSRQLLPALRAAS-GCVIYINSGAGNGPH----------PGNTI  145 (245)
T ss_dssp             EEEECC----------CHHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHT-CEEEEEC--------------------CHH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHhhcC-CeEEEEcCcccccCC----------CCchH
Confidence            9999999865422    22345677899999985 6666553    333 589999999887643          23678


Q ss_pred             HHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHH
Q 020880          151 YGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK  223 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  223 (320)
                      |+.+|...+.+.+.+       +.++.+++||.+.++-...         +...   .+..+     ....+++++|+|+
T Consensus       146 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---------~~~~---~~~~~-----~~~~~~~p~dvA~  208 (245)
T 3e9n_A          146 YAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG---------LMDS---QGTNF-----RPEIYIEPKEIAN  208 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------CCGGGSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh---------hhhh---hhccc-----ccccCCCHHHHHH
Confidence            999999999987764       3567889999998764311         0000   00000     1234789999999


Q ss_pred             HHHHHHhhhhccccccCceeEec
Q 020880          224 IILALTNRWLSEDKQMQLLLNVG  246 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~  246 (320)
                      +++.++..+..     +.++|+.
T Consensus       209 ~i~~l~~~~~~-----~~~~~i~  226 (245)
T 3e9n_A          209 AIRFVIDAGET-----TQITNVD  226 (245)
T ss_dssp             HHHHHHTSCTT-----EEEEEEE
T ss_pred             HHHHHHcCCCc-----cceeeeE
Confidence            99999987543     2367764

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.87  E-value=8.7e-21  Score=159.44  Aligned_cols=218  Identities=15%  Similarity=0.100  Sum_probs=147.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-Chhhhh---hhCCCcceEEEeeCCCcccHHHHHHH----h
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-LPQLLL---DALPHSFVFFDVDLKSGSGFDAVALK----F   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~----~   74 (320)
                      +|++|||||+|+||++++++|+++|   ++|++..++.. ..+.+.   ...+..+.++.+|++|+++++++++.    +
T Consensus        27 ~k~~lVTGas~GIG~aia~~la~~G---~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           27 NKVAIVTGASRGIGAAIAARLASDG---FTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHT---CEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999   88887755433 333322   22345678899999999988777653    4


Q ss_pred             CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           75 GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      +++|++||+||......    ...+++..+++|+.+++ ++++++...  ...++|++||...+...          .+.
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~  172 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTF-NTLREAAQRLRVGGRIINMSTSQVGLLH----------PSY  172 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHH-HHHHHHHHHEEEEEEEEEECCTHHHHCC----------TTC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCeEEEEeChhhccCC----------CCc
Confidence            68999999999865422    22334677889999996 777776542  12489999998876432          236


Q ss_pred             chHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          149 NVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      ..|+.||...+.+.+.+       +.++..++||.|..+-........    .. ..+....+       ...+...+|+
T Consensus       173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~----~~-~~~~~~~p-------~~r~~~pedv  240 (267)
T 3u5t_A          173 GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDE----VR-DRFAKLAP-------LERLGTPQDI  240 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---------------CH-HHHHTSST-------TCSCBCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHH----HH-HHHHhcCC-------CCCCcCHHHH
Confidence            68999999999988764       245678999998765321100000    01 11112222       2346889999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCC
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      |++++.++.....  ...+.++++.+|
T Consensus       241 A~~v~~L~s~~~~--~itG~~i~vdGG  265 (267)
T 3u5t_A          241 AGAVAFLAGPDGA--WVNGQVLRANGG  265 (267)
T ss_dssp             HHHHHHHHSTTTT--TCCSEEEEESSS
T ss_pred             HHHHHHHhCcccc--CccCCEEEeCCC
Confidence            9999999865322  123558888776

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.87  E-value=1.6e-21  Score=165.24  Aligned_cols=204  Identities=14%  Similarity=0.113  Sum_probs=142.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----CCcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      .+|++|||||+|+||.+++++|+++|   ++|++.+|+.+......+.+    ...+.++.+|++|++++.++++.    
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEG---YSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35799999999999999999999999   89999999876655444332    23347899999999988777654    


Q ss_pred             hCCCCEEEECCCccCcc-----ccccCchhhhhccccccHHHHHhhhh----hcc--CceEEEeechhhhcccCCCCccc
Q 020880           74 FGQPDVVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLSSFT----ENK--ENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~--~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                      ++++|+|||+||.....     .+.++++..+++|+.+++ ++.+++.    +.+  ..+||++||...+...       
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-------  180 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAF-LCTQHAFRMMKAQTPRGGRIINNGSISAQTPR-------  180 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC-------
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC-------
Confidence            46899999999975431     223455678999999985 6655553    332  3599999998876432       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC-cccC
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRC  214 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  214 (320)
                         .+...|+.+|...+.+.+.+.       .++.+++|+.|..+-...          +   . . ........ ....
T Consensus       181 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----------~---~-~-~~~~~~~~~~~~~  242 (281)
T 4dry_A          181 ---PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTAR----------M---S-T-GVLQANGEVAAEP  242 (281)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC---------------------C-EEECTTSCEEECC
T ss_pred             ---CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhh----------h---c-c-hhhhhhhcccccC
Confidence               346789999999999877643       356779999886543210          0   0 0 00000000 1224


Q ss_pred             ceeHHHHHHHHHHHHhhhhc
Q 020880          215 PVYVRDVVKIILALTNRWLS  234 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~  234 (320)
                      ++..+|+|++++.++..+..
T Consensus       243 ~~~pedvA~~v~fL~s~~~~  262 (281)
T 4dry_A          243 TIPIEHIAEAVVYMASLPLS  262 (281)
T ss_dssp             CBCHHHHHHHHHHHHHSCTT
T ss_pred             CCCHHHHHHHHHHHhCCCcc
Confidence            78999999999999987543

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.87  E-value=9.6e-21  Score=159.45  Aligned_cols=222  Identities=11%  Similarity=0.055  Sum_probs=156.0

Q ss_pred             CCcEEEEEcCC--ChhhHHHHHHHhhccCCCceEEEecCCCCCh-hhhh----hhCCCcceEEEeeCCCcccHHHHHHH-
Q 020880            2 SKKRVLVVGGT--GYLGQHLLQGLSEIEGKPYDVAATHHSTPLP-QLLL----DALPHSFVFFDVDLKSGSGFDAVALK-   73 (320)
Q Consensus         2 ~~~~ilItGat--G~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~-~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~~-   73 (320)
                      ++|+++||||+  |.||.+++++|+++|   ++|+++.|+.... ....    ...+..+.++.+|++|+++++++++. 
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G---~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMG---AAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTS---CEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCC---CeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            46899999999  999999999999999   8999998886654 2222    22356788899999999998777654 


Q ss_pred             ---hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCccc
Q 020880           74 ---FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        74 ---~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                         ++++|+|||+||......    +..+++..+++|+.+++ ++++++    ++.+..++|++||...+...       
T Consensus        96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  167 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTF-HCAKAVGHHFKERGTGSLVITASMSGHIAN-------  167 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEECCGGGTSCC-------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHH-HHHHHHHHHHHHcCCceEEEEccccccccC-------
Confidence               468999999999865422    23445678999999986 777776    44555699999998765432       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHc------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEKC------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~~------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                       ...+...|+.+|...+.+.+.+.      .++..+.|+.+..+-..     ...... ...+....+       ...+.
T Consensus       168 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~-----~~~~~~-~~~~~~~~~-------~~r~~  233 (267)
T 3gdg_A          168 -FPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSD-----FVPKET-QQLWHSMIP-------MGRDG  233 (267)
T ss_dssp             -SSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGG-----GSCHHH-HHHHHTTST-------TSSCE
T ss_pred             -CCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhh-----hCCHHH-HHHHHhcCC-------CCCCc
Confidence             11246789999999999887643      24556888888654321     111111 122222222       23578


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +.+|+|++++.++.....  ...+.++++.+|..
T Consensus       234 ~~~dva~~~~~l~s~~~~--~itG~~i~vdgG~~  265 (267)
T 3gdg_A          234 LAKELKGAYVYFASDAST--YTTGADLLIDGGYT  265 (267)
T ss_dssp             ETHHHHHHHHHHHSTTCT--TCCSCEEEESTTGG
T ss_pred             CHHHHHhHhheeecCccc--cccCCEEEECCcee
Confidence            899999999999865321  22355899988743

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.86  E-value=4e-21  Score=160.51  Aligned_cols=219  Identities=12%  Similarity=0.052  Sum_probs=145.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh--hCCCcceEEEeeCCCcccHHHHH----HHhCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD--ALPHSFVFFDVDLKSGSGFDAVA----LKFGQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~----~~~~~   76 (320)
                      ||++|||||+|+||++++++|+++|   ++|++++|+.++.....+  ..+..+..+     |++++++++    +.+++
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~   72 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAG---HTVACHDESFKQKDELEAFAETYPQLKPM-----SEQEPAELIEAVTSAYGQ   72 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTT---CEEEECCGGGGSHHHHHHHHHHCTTSEEC-----CCCSHHHHHHHHHHHHSC
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHhcCCcEEEE-----CHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999   899999998766544322  112233322     555555444    34568


Q ss_pred             CCEEEECCCcc-Ccc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           77 PDVVVNCAALS-VPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        77 ~d~Vih~a~~~-~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      +|+|||+||.. ...    .+..+++..+++|+.+++ ++++++.    +.+..+||++||...+...          .+
T Consensus        73 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~  141 (254)
T 1zmt_A           73 VDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPF-ALVNAVASQMKKRKSGHIIFITSATPFGPW----------KE  141 (254)
T ss_dssp             CCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEECCSTTTSCC----------TT
T ss_pred             CCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCcEEEEECCcccccCC----------CC
Confidence            99999999976 321    122345678899999986 7666663    4455699999998876432          23


Q ss_pred             cchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCC---hHHHHHHHHhcCCceEeecCcccCcee
Q 020880          148 VNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSL---PIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      ...|+.+|...+.+.+.+       +.++.+++|+.|+|+..........   ......... ...       ....+.+
T Consensus       142 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~-~~~-------p~~~~~~  213 (254)
T 1zmt_A          142 LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVK-KVT-------ALQRLGT  213 (254)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHH-HHS-------SSSSCBC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHh-ccC-------CCCCCcC
Confidence            668999999999877654       4578899999999886432110000   000111110 111       1123688


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      .+|+|++++.++.....  ...+.++++.+|..
T Consensus       214 p~dvA~~v~~l~s~~~~--~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          214 QKELGELVAFLASGSCD--YLTGQVFWLAGGFP  244 (254)
T ss_dssp             HHHHHHHHHHHHTTSCG--GGTTCEEEESTTCC
T ss_pred             HHHHHHHHHHHhCcccC--CccCCEEEECCCch
Confidence            99999999999875321  12355899988743

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.86  E-value=2.5e-21  Score=161.26  Aligned_cols=195  Identities=18%  Similarity=0.214  Sum_probs=140.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----C-CcceEEEeeCCCcccHHHHHHH---
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----P-HSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~-~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      +|++|||||+|.||.+++++|+++|   ++|++.+|+.++.+...+.+     . ..+.++.+|++|++++.++++.   
T Consensus         7 ~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            7 KGLAIITGASQGIGAVIAAGLATDG---YRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHHT---CEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999   89999999876655444322     1 4677899999999988776653   


Q ss_pred             -hCCCCEEEECCCccCcc---ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 -FGQPDVVVNCAALSVPR---VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                       ++++|++||+||.....   .+.++++..+++|+.+++ .+++++    ++.+..++|++||...+.+          .
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~  152 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQY-GILKTVTEIMKVQKNGYIFNVASRAAKYG----------F  152 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred             hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCeEEEEEccHHhcCC----------C
Confidence             46899999999986432   222345678899999986 777766    4455569999999876532          1


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .+...|+.+|...+.+.+.+       +.++..++||.|..+-             ... .  ....     ....+++.
T Consensus       153 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~-------------~~~-~--~~~~-----~~~~~~~p  211 (250)
T 3nyw_A          153 ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM-------------AKK-A--GTPF-----KDEEMIQP  211 (250)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH-------------HHH-T--TCCS-----CGGGSBCH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch-------------hhh-c--CCCc-----ccccCCCH
Confidence            23668999999999877764       3456779999885431             111 1  1111     12347899


Q ss_pred             HHHHHHHHHHHhhh
Q 020880          219 RDVVKIILALTNRW  232 (320)
Q Consensus       219 ~D~a~~~~~~~~~~  232 (320)
                      +|+|++++.++..+
T Consensus       212 ~dva~~v~~l~s~~  225 (250)
T 3nyw_A          212 DDLLNTIRCLLNLS  225 (250)
T ss_dssp             HHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHcCC
Confidence            99999999999864

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.86  E-value=3.7e-21  Score=159.44  Aligned_cols=203  Identities=16%  Similarity=0.091  Sum_probs=145.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh------CC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF------GQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~------~~   76 (320)
                      +|++|||||+|+||++++++|+++|   ++|+++.|+++...       ....++.+|++|++++.++++.+      ++
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~   76 (241)
T 1dhr_A            7 ARRVLVYGGRGALGSRCVQAFRARN---WWVASIDVVENEEA-------SASVIVKMTDSFTEQADQVTAEVGKLLGDQK   76 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSCCTTS-------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeCChhhcc-------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999999   89999999875532       13456789999999888777643      58


Q ss_pred             CCEEEECCCccCcc-----ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           77 PDVVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        77 ~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      +|+|||+||.....     ....+++..+++|+.+++ ++++++...  ...+||++||...+.+.          .+..
T Consensus        77 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~-~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  145 (241)
T 1dhr_A           77 VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTST-ISSHLATKHLKEGGLLTLAGAKAALDGT----------PGMI  145 (241)
T ss_dssp             EEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHH-HHHHHHHHHEEEEEEEEEECCGGGGSCC----------TTBH
T ss_pred             CCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHhhccCCEEEEECCHHHccCC----------CCch
Confidence            99999999976422     122345677889999986 777777543  12499999999877532          2467


Q ss_pred             hHHHHHHHHHHHHHHHcC---------CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          150 VYGKSKVAAEKFIYEKCS---------NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~~---------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      .|+.+|...+.+.+.+..         ++.+++|+.+-.+-             ..... ...       ....++..+|
T Consensus       146 ~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~-------------~~~~~-~~~-------~~~~~~~~~~  204 (241)
T 1dhr_A          146 GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM-------------NRKSM-PEA-------DFSSWTPLEF  204 (241)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH-------------HHHHS-TTS-------CGGGSEEHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc-------------ccccC-cch-------hhccCCCHHH
Confidence            899999999998887532         45678998774331             11111 111       1223578899


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|++++.++.....  ...+..+.+.++.
T Consensus       205 vA~~v~~l~~~~~~--~~~G~~~~v~g~~  231 (241)
T 1dhr_A          205 LVETFHDWITGNKR--PNSGSLIQVVTTD  231 (241)
T ss_dssp             HHHHHHHHHTTTTC--CCTTCEEEEEEET
T ss_pred             HHHHHHHHhcCCCc--CccceEEEEeCCC
Confidence            99999999865322  1235578776654

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.86  E-value=1.3e-20  Score=160.46  Aligned_cols=219  Identities=16%  Similarity=0.150  Sum_probs=153.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEec-CCCCChhhhhh----hCCCcceEEEeeCCCcc-----------
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLD----ALPHSFVFFDVDLKSGS-----------   65 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~-r~~~~~~~~~~----~~~~~~~~~~~Dl~d~~-----------   65 (320)
                      .+|++|||||+|.||.+++++|+++|   ++|++++ |+.+......+    ..+..+.++.+|++|++           
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA   84 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence            46799999999999999999999999   8999999 87655443332    22456888999999999           


Q ss_pred             ------cHHHHHH----HhCCCCEEEECCCccCccc----c--------------ccCchhhhhccccccHHHHHhhhh-
Q 020880           66 ------GFDAVAL----KFGQPDVVVNCAALSVPRV----C--------------ENDPDSAMSINVPSSLVNWLSSFT-  116 (320)
Q Consensus        66 ------~~~~~~~----~~~~~d~Vih~a~~~~~~~----~--------------~~~~~~~~~~n~~~~~~~~l~~~~-  116 (320)
                            ++.++++    .++++|++||+||......    .              ..+++..+++|+.+++ .+++++. 
T Consensus        85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~  163 (291)
T 1e7w_A           85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPY-FLIKAFAH  163 (291)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHH-HHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHH-HHHHHHHH
Confidence                  8777665    3468999999999764321    1              2334577899999986 7766664 


Q ss_pred             ---hcc------CceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccC
Q 020880          117 ---ENK------ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGP  180 (320)
Q Consensus       117 ---~~~------~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~  180 (320)
                         +.+      ..+||++||...+.+.          .+...|+.+|...+.+.+.+       +.++..++|+.+..+
T Consensus       164 ~m~~~~~~~~~~~g~Iv~isS~~~~~~~----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~  233 (291)
T 1e7w_A          164 RVAGTPAKHRGTNYSIINMVDAMTNQPL----------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV  233 (291)
T ss_dssp             HHHTSCGGGSCSCEEEEEECCTTTTSCC----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG
T ss_pred             HHHhcCCCCCCCCcEEEEEechhhcCCC----------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCC
Confidence               333      4699999999876532          24678999999999977754       345678999988554


Q ss_pred             CCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      - .  .    ....... +....++.      ..+...+|+|++++.++.....  ...+.++++.+|..
T Consensus       234 ~-~--~----~~~~~~~-~~~~~p~~------~r~~~pedvA~~v~~l~s~~~~--~itG~~i~vdGG~~  287 (291)
T 1e7w_A          234 D-D--M----PPAVWEG-HRSKVPLY------QRDSSAAEVSDVVIFLCSSKAK--YITGTCVKVDGGYS  287 (291)
T ss_dssp             G-G--S----CHHHHHH-HHTTCTTT------TSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTGG
T ss_pred             c-c--C----CHHHHHH-HHhhCCCC------CCCCCHHHHHHHHHHHhCCccc--CccCcEEEECCCcc
Confidence            3 1  1    1122222 21222211      0367899999999999875321  12355888887744

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.85  E-value=4.8e-21  Score=160.67  Aligned_cols=222  Identities=14%  Similarity=0.118  Sum_probs=146.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC---hhhhhh---hCCCcceEEEeeCCCcccHHHHHHH---
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL---PQLLLD---ALPHSFVFFDVDLKSGSGFDAVALK---   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~---~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~---   73 (320)
                      +|++|||||+|.||++++++|+++|   ++|++..|....   .+.+.+   ..+..+.++.+|++|++++.++++.   
T Consensus        11 ~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   87 (262)
T 3ksu_A           11 NKVIVIAGGIKNLGALTAKTFALES---VNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK   87 (262)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHTTSS---CEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999   889888775332   222222   2245678899999999998877753   


Q ss_pred             -hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCC
Q 020880           74 -FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                       ++++|++||+||......    +..+++..+++|+.+++ .+++++...  +..++|++||...+....          
T Consensus        88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~m~~~g~iv~isS~~~~~~~~----------  156 (262)
T 3ksu_A           88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAY-FFIKQAAKHMNPNGHIITIATSLLAAYTG----------  156 (262)
T ss_dssp             HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHH-HHHHHHHTTEEEEEEEEEECCCHHHHHHC----------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHhhcCCCEEEEEechhhccCCC----------
Confidence             468999999999765422    23345677889999996 888887653  334899999988765432          


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+.+.+       +.++..++||.|..+-.......    ... ......       .....+...+
T Consensus       157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~----~~~-~~~~~~-------~~~~r~~~pe  224 (262)
T 3ksu_A          157 FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETK----EST-AFHKSQ-------AMGNQLTKIE  224 (262)
T ss_dssp             CCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------------------CCCCSCCGG
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCch----HHH-HHHHhc-------CcccCCCCHH
Confidence            2567999999999987764       34567899998854321000000    000 000000       1123468899


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCCCcCH
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR  253 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~  253 (320)
                      |+|++++.++.. ..  ...+.++++.+|.....
T Consensus       225 dvA~~v~~L~s~-~~--~itG~~i~vdGg~~~~~  255 (262)
T 3ksu_A          225 DIAPIIKFLTTD-GW--WINGQTIFANGGYTTRE  255 (262)
T ss_dssp             GTHHHHHHHHTT-TT--TCCSCEEEESTTCCCC-
T ss_pred             HHHHHHHHHcCC-CC--CccCCEEEECCCccCCC
Confidence            999999999875 21  23356999988765443

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.85  E-value=5.9e-20  Score=155.94  Aligned_cols=199  Identities=15%  Similarity=0.072  Sum_probs=142.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh-------hh---hhhCCCcceEEEeeCCCcccHHHHH
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-------LL---LDALPHSFVFFDVDLKSGSGFDAVA   71 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~-------~~---~~~~~~~~~~~~~Dl~d~~~~~~~~   71 (320)
                      .+|++|||||+|.||++++++|+++|   ++|++++|+.++.+       ..   ....+..+.++.+|++|++++.+++
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   84 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADG---ANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV   84 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTT---CEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            46899999999999999999999999   89999999876422       11   1222457888999999999887766


Q ss_pred             HH----hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhh----ccCceEEEeechhhhcccCCCC
Q 020880           72 LK----FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTE----NKENLLIHLSTDQVYEGVKSFY  139 (320)
Q Consensus        72 ~~----~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~  139 (320)
                      +.    ++++|++||+||......    +.++++..+++|+.+++ ++++++..    .+..+||++||...+...    
T Consensus        85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----  159 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTY-AVSQSCIPHMKGRDNPHILTLSPPIRLEPK----  159 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHH-HHHHHHGGGTTTSSSCEEEECCCCCCCSGG----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCcEEEEECChhhccCC----
Confidence            53    468999999999865422    22344677889999986 77776643    355699999998765432    


Q ss_pred             cccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcc
Q 020880          140 KEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       140 ~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                           ..+...|+.||...+.+.+.+       +.++..++|+.+...            .+.........+       .
T Consensus       160 -----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t------------~~~~~~~~~~~~-------~  215 (285)
T 3sc4_A          160 -----WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT------------AAVQNLLGGDEA-------M  215 (285)
T ss_dssp             -----GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC------------HHHHHHHTSCCC-------C
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc------------HHHHhhcccccc-------c
Confidence                 023578999999999987764       345677888743221            122222222221       2


Q ss_pred             cCceeHHHHHHHHHHHHhhh
Q 020880          213 RCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~  232 (320)
                      ..+...+|+|++++.++...
T Consensus       216 ~r~~~pedvA~~~~~l~s~~  235 (285)
T 3sc4_A          216 ARSRKPEVYADAAYVVLNKP  235 (285)
T ss_dssp             TTCBCTHHHHHHHHHHHTSC
T ss_pred             cCCCCHHHHHHHHHHHhCCc
Confidence            24678999999999999764

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.85  E-value=1.9e-20  Score=159.23  Aligned_cols=196  Identities=13%  Similarity=0.075  Sum_probs=140.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---C-CcceEEEeeCCCcccHHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---P-HSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      .+|+||||||+|+||++++++|+++|   ++|++++|++++...+.+..   + ..+.++.+|++|.+++.++++.    
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMG---AHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999   89999999876554433221   2 3578899999999988777653    


Q ss_pred             hCCCCEEEEC-CCccCccc---cccCchhhhhccccccHHHHHhhhhhc---cCceEEEeechhhhcccCCCCcccCCCC
Q 020880           74 FGQPDVVVNC-AALSVPRV---CENDPDSAMSINVPSSLVNWLSSFTEN---KENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        74 ~~~~d~Vih~-a~~~~~~~---~~~~~~~~~~~n~~~~~~~~l~~~~~~---~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++++|+|||+ |+......   +..+.+..+++|+.+++ ++++++...   +..+||++||...+.+.          .
T Consensus       104 ~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  172 (286)
T 1xu9_A          104 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYV-VLTVAALPMLKQSNGSIVVVSSLAGKVAY----------P  172 (286)
T ss_dssp             HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEEEGGGTSCC----------T
T ss_pred             cCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHH-HHHHHHHHHHHHCCCEEEEECCcccccCC----------C
Confidence            4689999999 56543221   22334677899999986 777766432   23599999999876432          2


Q ss_pred             CcchHHHHHHHHHHHHHHH---------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          147 PVNVYGKSKVAAEKFIYEK---------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~---------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      +...|+.||...+.+.+.+         +.++.+++||.+..+.             ..... .+       .....+++
T Consensus       173 ~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~-------------~~~~~-~~-------~~~~~~~~  231 (286)
T 1xu9_A          173 MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-------------AMKAV-SG-------IVHMQAAP  231 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH-------------HHHHS-CG-------GGGGGCBC
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh-------------HHHhc-cc-------cccCCCCC
Confidence            4678999999999877543         3456789998885431             11111 11       11234689


Q ss_pred             HHHHHHHHHHHHhhh
Q 020880          218 VRDVVKIILALTNRW  232 (320)
Q Consensus       218 v~D~a~~~~~~~~~~  232 (320)
                      .+|+|+.++.++...
T Consensus       232 ~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          232 KEECALEIIKGGALR  246 (286)
T ss_dssp             HHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhcC
Confidence            999999999998763

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.85  E-value=7.3e-20  Score=149.49  Aligned_cols=216  Identities=14%  Similarity=0.101  Sum_probs=153.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ++|++|||||++-||.++++.|.++|   .+|+..+|+.+..+.   .....+..+.+|++|+++++++++.++++|++|
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~G---a~Vv~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLV   83 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELG---AEVVALGLDADGVHA---PRHPRIRREELDITDSQRLQRLFEALPRLDVLV   83 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTTSTTS---CCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHhh---hhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            37899999999999999999999999   899999998766543   223567889999999999999999999999999


Q ss_pred             ECCCccCc--cccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHH
Q 020880           82 NCAALSVP--RVCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSK  155 (320)
Q Consensus        82 h~a~~~~~--~~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK  155 (320)
                      |+||...+  ..+.++++..+++|+.+++ .+.+++    ++.+ .+||++||........          ....|+.||
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~-~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~----------~~~~Y~asK  151 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAM-LASQLARPLLAQRG-GSILNIASMYSTFGSA----------DRPAYSASK  151 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHC-EEEEEECCGGGTSCCS----------SCHHHHHHH
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHHcC-CeEEEEeeccccCCCC----------CCHHHHHHH
Confidence            99998654  2233456788999999986 555444    3333 4999999988654322          356899999


Q ss_pred             HHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHH
Q 020880          156 VAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       156 ~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  228 (320)
                      .....+.+.+.       .++-.+.|+.|--|-.......   ........ +..|+.       -+...+|+|.+++.+
T Consensus       152 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~---~~~~~~~~-~~~Plg-------R~g~peeiA~~v~fL  220 (242)
T 4b79_A          152 GAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKAD---VEATRRIM-QRTPLA-------RWGEAPEVASAAAFL  220 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCC---HHHHHHHH-HTCTTC-------SCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCC---HHHHHHHH-hcCCCC-------CCcCHHHHHHHHHHH
Confidence            99999777642       3456799998865432111110   11222222 233332       256799999999999


Q ss_pred             HhhhhccccccCceeEecCC
Q 020880          229 TNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       229 ~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +....+  --.+.++.+.+|
T Consensus       221 aSd~a~--~iTG~~l~VDGG  238 (242)
T 4b79_A          221 CGPGAS--FVTGAVLAVDGG  238 (242)
T ss_dssp             TSGGGT--TCCSCEEEESTT
T ss_pred             hCchhc--CccCceEEECcc
Confidence            865432  123458888776

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.85  E-value=1.9e-20  Score=155.76  Aligned_cols=196  Identities=15%  Similarity=0.176  Sum_probs=140.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----CCcceEEEeeC--CCcccHHHHHH---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDL--KSGSGFDAVAL---   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl--~d~~~~~~~~~---   72 (320)
                      .+|+++||||+|+||++++++|+++|   ++|++++|+.+......+.+    .....++.+|+  +|.+++.++++   
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHG---ASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            46899999999999999999999999   89999999876655443322    24566777887  88888776665   


Q ss_pred             -HhCCCCEEEECCCccCcc-----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCccc
Q 020880           73 -KFGQPDVVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        73 -~~~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                       .++++|+|||+||...+.     .+..+++..+++|+.+++ ++++++    ++.+..++|++||...+.+.       
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------  161 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATF-MLTRALLPLLKRSEDASIAFTSSSVGRKGR-------  161 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHTTSSSEEEEEECCGGGTSCC-------
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHH-HHHHHHHHHHHhCCCCeEEEEcchhhcCCC-------
Confidence             346899999999975321     123455678899999996 777776    45556699999998876432       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHc--------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEKC--------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                         .+...|+.+|...+.+.+.+.        .++..++||.+-.+             +........        ....
T Consensus       162 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~-------------~~~~~~~~~--------~~~~  217 (247)
T 3i1j_A          162 ---ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG-------------MRAQAYPDE--------NPLN  217 (247)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH-------------HHHHHSTTS--------CGGG
T ss_pred             ---CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc-------------cchhccccc--------CccC
Confidence               246789999999999776542        23456788776432             111111111        1123


Q ss_pred             ceeHHHHHHHHHHHHhhh
Q 020880          215 PVYVRDVVKIILALTNRW  232 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~  232 (320)
                      +...+|+|++++.++...
T Consensus       218 ~~~p~dva~~~~~l~s~~  235 (247)
T 3i1j_A          218 NPAPEDIMPVYLYLMGPD  235 (247)
T ss_dssp             SCCGGGGTHHHHHHHSGG
T ss_pred             CCCHHHHHHHHHHHhCch
Confidence            577999999999998754

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.84  E-value=6.7e-20  Score=159.29  Aligned_cols=198  Identities=13%  Similarity=0.094  Sum_probs=142.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh----------hhhhhCCCcceEEEeeCCCcccHHHHH
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ----------LLLDALPHSFVFFDVDLKSGSGFDAVA   71 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~----------~~~~~~~~~~~~~~~Dl~d~~~~~~~~   71 (320)
                      .+|+||||||+|.||.+++++|+++|   ++|+++.|+.++..          ......+..+.++.+|++|++++.+++
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~G---a~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~  120 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDG---ANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV  120 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCC---CEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            36799999999999999999999999   89999999876522          122233456788999999999887777


Q ss_pred             HH----hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCC
Q 020880           72 LK----FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFY  139 (320)
Q Consensus        72 ~~----~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~  139 (320)
                      +.    ++++|+|||+||.....    ...++++..+++|+.+++ ++++++    ++.+..+||++||...+...    
T Consensus       121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~----  195 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTY-LASKACIPYLKKSKVAHILNISPPLNLNPV----  195 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHH-HHHHHHHHHHTTCSSCEEEEECCCCCCCGG----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHCCCCEEEEECCHHHcCCC----
Confidence            54    46899999999986432    222345678999999996 777776    45556699999998866431    


Q ss_pred             cccCCCCCcchHHHHHHHHHHHHHHH------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCccc
Q 020880          140 KEEDEIAPVNVYGKSKVAAEKFIYEK------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       140 ~E~~~~~p~~~Y~~sK~~~e~~~~~~------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                          +..+...|+.+|...+.+.+.+      +.++..+.|+.+....            +.. .+....+       ..
T Consensus       196 ----~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~------------~~~-~~~~~~~-------~~  251 (346)
T 3kvo_A          196 ----WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA------------AMD-MLGGPGI-------ES  251 (346)
T ss_dssp             ----GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH------------HHH-HHCC--C-------GG
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH------------HHH-hhccccc-------cc
Confidence                1224678999999999877654      2345678887543321            111 1211111       22


Q ss_pred             CceeHHHHHHHHHHHHhh
Q 020880          214 CPVYVRDVVKIILALTNR  231 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~  231 (320)
                      .+...+|+|++++.++..
T Consensus       252 r~~~pedvA~~v~~L~s~  269 (346)
T 3kvo_A          252 QCRKVDIIADAAYSIFQK  269 (346)
T ss_dssp             GCBCTHHHHHHHHHHHTS
T ss_pred             cCCCHHHHHHHHHHHHhc
Confidence            367899999999999976

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.84  E-value=1.1e-19  Score=149.44  Aligned_cols=210  Identities=13%  Similarity=0.134  Sum_probs=149.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHH----HHhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVA----LKFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----~~~~~~d   78 (320)
                      .|+||||||++-||.++++.|+++|   ++|+..+|+++......+. ..++.++.+|++|++++++++    +.++++|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~G---a~V~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD   77 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAG---DKVCFIDIDEKRSADFAKE-RPNLFYFHGDVADPLTLKKFVEYAMEKLQRID   77 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHTT-CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHh-cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999   8999999987666655554 346778999999999877765    4568999


Q ss_pred             EEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           79 VVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        79 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      ++||+||.....    .+.++++..+++|+.+++ .+.+++.    +.+ .++|++||...+.+..          ....
T Consensus        78 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~-~~~~~~~~~m~~~~-G~IInisS~~~~~~~~----------~~~~  145 (247)
T 3ged_A           78 VLVNNACRGSKGILSSLLYEEFDYILSVGLKAPY-ELSRLCRDELIKNK-GRIINIASTRAFQSEP----------DSEA  145 (247)
T ss_dssp             EEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTT-CEEEEECCGGGTSCCT----------TCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHhhcC-CcEEEEeecccccCCC----------CCHH
Confidence            999999976542    233456788999999986 5555543    333 4999999988764322          2568


Q ss_pred             HHHHHHHHHHHHHHH----cC--CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHH
Q 020880          151 YGKSKVAAEKFIYEK----CS--NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI  224 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~----~~--~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  224 (320)
                      |+.||.....+.+.+    +.  ++-.+.||.+--+..     ..+....    . ...|+       .-+...+|+|++
T Consensus       146 Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~-----~~~~~~~----~-~~~Pl-------~R~g~pediA~~  208 (247)
T 3ged_A          146 YASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQ-----QEFTQED----C-AAIPA-------GKVGTPKDISNM  208 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC--------CCHHH----H-HTSTT-------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCc-----HHHHHHH----H-hcCCC-------CCCcCHHHHHHH
Confidence            999999999876654    33  445688888744322     1111111    1 12222       125679999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCC
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ++.++....    -.+.++.+.+|-
T Consensus       209 v~fL~s~~~----iTG~~i~VDGG~  229 (247)
T 3ged_A          209 VLFLCQQDF----ITGETIIVDGGM  229 (247)
T ss_dssp             HHHHHHCSS----CCSCEEEESTTG
T ss_pred             HHHHHhCCC----CCCCeEEECcCH
Confidence            999986432    235589998874

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.84  E-value=4.1e-20  Score=154.93  Aligned_cols=209  Identities=16%  Similarity=0.082  Sum_probs=140.2

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      |++|++|||||+|+||++++++|+++|   ++|++..|+.+......+.+   +..+.++.+|++|++++.++++.    
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAG---ATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDRE   79 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            567899999999999999999999999   89999999866554433322   34678899999999998877754    


Q ss_pred             -hCCCCEEEECCC--cc------Cc---cccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCC
Q 020880           74 -FGQPDVVVNCAA--LS------VP---RVCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKS  137 (320)
Q Consensus        74 -~~~~d~Vih~a~--~~------~~---~~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~  137 (320)
                       ++++|++||+||  ..      ..   .....+++..+++|+.+++ .+.+++    .+.+..+||++||...+..   
T Consensus        80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  155 (260)
T 2qq5_A           80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHY-FCSVYGARLMVPAGQGLIVVISSPGSLQY---  155 (260)
T ss_dssp             HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHH-HHHHHHHHHHGGGTCCEEEEECCGGGTSC---
T ss_pred             cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHH-HHHHHHHHHHhhcCCcEEEEEcChhhcCC---
Confidence             568999999994  22      11   1222345677889998875 544444    3555569999999987642   


Q ss_pred             CCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC
Q 020880          138 FYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD  210 (320)
Q Consensus       138 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (320)
                              .+...|+.+|...+.+.+.+       +.++.+++||.|..+-..........  .......   ...   .
T Consensus       156 --------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~---~~~---~  219 (260)
T 2qq5_A          156 --------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEV--LQDPVLK---QFK---S  219 (260)
T ss_dssp             --------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------------
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccc--cchhHHH---HHH---h
Confidence                    23568999999999987654       45778899999976642110000000  0000000   000   0


Q ss_pred             cccCceeHHHHHHHHHHHHhhh
Q 020880          211 ECRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~~  232 (320)
                      ....+...+|+|++++.++...
T Consensus       220 ~~~~~~~pe~va~~v~~l~s~~  241 (260)
T 2qq5_A          220 AFSSAETTELSGKCVVALATDP  241 (260)
T ss_dssp             --CHHHHHHHHHHHHHHHHTCT
T ss_pred             hhccCCCHHHHHHHHHHHhcCc
Confidence            0011357899999999998753

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.83  E-value=2.3e-19  Score=148.17  Aligned_cols=223  Identities=11%  Similarity=0.057  Sum_probs=154.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHH----HHh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVA----LKF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~----~~~   74 (320)
                      .+|++|||||++-||.++++.|.++|   .+|+...|+++..+...+.   .+.++.++.+|++|++++++++    +.+
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~G---a~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALND---SIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999   8999999987766554443   3567888999999999987766    456


Q ss_pred             CCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +++|++||+||....     +.+.++++..+++|+.+++ .+.+++    ++.+-.+||++||...+.+.          
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~-~~~~~~~p~m~~~~~G~IVnisS~~g~~~~----------  151 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAF-YSSRAVIPIMLKQGKGVIVNTASIAGIRGG----------  151 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTCSS----------
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCcEEEEEechhhcCCC----------
Confidence            899999999996532     2233456788999999986 554444    44555699999998865432          


Q ss_pred             CCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .....|+.+|.....+.+.+.       .++-.+.||.|--+-........  ............+.       .-+...
T Consensus       152 ~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~--~~~~~~~~~~~~~~-------~R~g~p  222 (254)
T 4fn4_A          152 FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPS--ELGMRTLTKLMSLS-------SRLAEP  222 (254)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCC--HHHHHHHHHHHTTC-------CCCBCH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCc--HHHHHHHHhcCCCC-------CCCcCH
Confidence            135689999999998777642       35567999988544221111111  11111111111111       124678


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|+|.+++.++....+  -..+.++.+.+|-
T Consensus       223 ediA~~v~fLaSd~a~--~iTG~~i~VDGG~  251 (254)
T 4fn4_A          223 EDIANVIVFLASDEAS--FVNGDAVVVDGGL  251 (254)
T ss_dssp             HHHHHHHHHHHSGGGT--TCCSCEEEESTTG
T ss_pred             HHHHHHHHHHhCchhc--CCcCCEEEeCCCc
Confidence            9999999999865432  1235588888763

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.83  E-value=1e-19  Score=153.66  Aligned_cols=199  Identities=15%  Similarity=0.103  Sum_probs=140.2

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhh-------hh---hhCCCcceEEEeeCCCcccHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-------LL---DALPHSFVFFDVDLKSGSGFDAV   70 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~-------~~---~~~~~~~~~~~~Dl~d~~~~~~~   70 (320)
                      |++|+++||||+|.||++++++|+++|   ++|++.+|+.++.+.       ..   ...+..+.++.+|++|++++.++
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDG---ANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            357899999999999999999999999   899999998764221       11   11245678899999999988777


Q ss_pred             HHH----hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCC
Q 020880           71 ALK----FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSF  138 (320)
Q Consensus        71 ~~~----~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~  138 (320)
                      ++.    ++++|++||+||......    ...+.+..+++|+.+++ .+.+++    ++.+..++|++||...+....  
T Consensus        81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~--  157 (274)
T 3e03_A           81 VAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSF-VCAQACLPHLLQAPNPHILTLAPPPSLNPAW--  157 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHH-HHHHHHHHHHTTSSSCEEEECCCCCCCCHHH--
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHH-HHHHHHHHHHHhcCCceEEEECChHhcCCCC--
Confidence            654    468999999999864422    22344677889999986 666665    345556999999987654310  


Q ss_pred             CcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCc
Q 020880          139 YKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDE  211 (320)
Q Consensus       139 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (320)
                            ..+...|+.||...+.+.+.+       +.++..++|+.+....-            . ... .+.       .
T Consensus       158 ------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~------------~-~~~-~~~-------~  210 (274)
T 3e03_A          158 ------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA------------I-NML-PGV-------D  210 (274)
T ss_dssp             ------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC---------------------CC-------C
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch------------h-hhc-ccc-------c
Confidence                  112567999999999977754       34567799985433221            0 111 011       1


Q ss_pred             ccCceeHHHHHHHHHHHHhhh
Q 020880          212 CRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       212 ~~~~i~v~D~a~~~~~~~~~~  232 (320)
                      ...+...+|+|++++.++...
T Consensus       211 ~~~~~~pedvA~~v~~l~s~~  231 (274)
T 3e03_A          211 AAACRRPEIMADAAHAVLTRE  231 (274)
T ss_dssp             GGGSBCTHHHHHHHHHHHTSC
T ss_pred             ccccCCHHHHHHHHHHHhCcc
Confidence            123678999999999998763

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.83  E-value=2.2e-19  Score=149.77  Aligned_cols=224  Identities=17%  Similarity=0.074  Sum_probs=155.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~d   78 (320)
                      +|.+|||||++-||.++++.|.++|   .+|++..|+.+..+...+.++.....+.+|++|+++++++++    .++++|
T Consensus        29 gKvalVTGas~GIG~aiA~~la~~G---a~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD  105 (273)
T 4fgs_A           29 AKIAVITGATSGIGLAAAKRFVAEG---ARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID  105 (273)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999   899999999888777777777778889999999998877664    557899


Q ss_pred             EEEECCCccCc----cccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCCcchHH
Q 020880           79 VVVNCAALSVP----RVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYG  152 (320)
Q Consensus        79 ~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~  152 (320)
                      ++||+||....    +.+.++++..+++|+.+++ .+.+++...  .-.++|++||.....+..          ....|+
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~-~~~~~~~p~m~~~G~IInisS~~~~~~~~----------~~~~Y~  174 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVL-FTVQKALPLLARGSSVVLTGSTAGSTGTP----------AFSVYA  174 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHH-HHHHHHTTTEEEEEEEEEECCGGGGSCCT----------TCHHHH
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHH-HHHHHHHHHHhhCCeEEEEeehhhccCCC----------CchHHH
Confidence            99999997643    2234566788999999986 666665431  123899999987654322          256899


Q ss_pred             HHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCC-ChHHHHHHHHhcCCceEeecCcccCceeHHHHHHH
Q 020880          153 KSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKS-LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI  224 (320)
Q Consensus       153 ~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  224 (320)
                      .+|.....+.+.+.       .++-.+.||.+--+......... .....+...+....|+.       -+...+|+|.+
T Consensus       175 asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg-------R~g~peeiA~~  247 (273)
T 4fgs_A          175 ASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG-------RVGRAEEVAAA  247 (273)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS-------SCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC-------CCcCHHHHHHH
Confidence            99999999777642       24556889888654321110000 00011111121222221       25679999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCC
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ++.++....+  --.+.++.+.+|.
T Consensus       248 v~FLaSd~a~--~iTG~~i~VDGG~  270 (273)
T 4fgs_A          248 ALFLASDDSS--FVTGAELFVDGGS  270 (273)
T ss_dssp             HHHHHSGGGT--TCCSCEEEESTTT
T ss_pred             HHHHhCchhc--CccCCeEeECcCh
Confidence            9999865432  1234588888764

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.82  E-value=2.2e-19  Score=149.06  Aligned_cols=216  Identities=11%  Similarity=0.051  Sum_probs=141.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEe-c--CCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-H--HSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~-~--r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~   75 (320)
                      +|++|||||+|+||++++++|+++|   ++|+++ .  |+.+......+.+ ..     .|+.|.+++.++++    .++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~~~~r~~~~~~~~~~~~-~~-----~~~~~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDG---YTVVCHDASFADAAERQRFESEN-PG-----TIALAEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTT---CEEEECCGGGGSHHHHHHHHHHS-TT-----EEECCCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC---CEEEEecCCcCCHHHHHHHHHHh-CC-----CcccCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999   899998 6  8866555544443 11     23335555555444    446


Q ss_pred             CCCEEEECCCccCc---c----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCCCCcccCC
Q 020880           76 QPDVVVNCAALSVP---R----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        76 ~~d~Vih~a~~~~~---~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      ++|+|||+||....   .    ...++++..+++|+.+++ ++++++.    +.+..+||++||...+.+.         
T Consensus        72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------  141 (244)
T 1zmo_A           72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPI-LLLQSAIAPLRAAGGASVIFITSSVGKKPL---------  141 (244)
T ss_dssp             CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCEEEEEECCGGGTSCC---------
T ss_pred             CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCcEEEEECChhhCCCC---------
Confidence            89999999997643   1    122345678899999986 7666664    4555699999999877532         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCCh-HHHHHHHHhcCCceEeecCcccCce
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLP-IQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                       .+...|+.+|...+.+.+.+       +.++.+++|+.+-.+-...  ..... ............+       ...+.
T Consensus       142 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~~p-------~~r~~  211 (244)
T 1zmo_A          142 -AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFP--TSDWENNPELRERVDRDVP-------LGRLG  211 (244)
T ss_dssp             -TTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBC--HHHHHHCHHHHHHHHHHCT-------TCSCB
T ss_pred             -CCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc--cccccchHHHHHHHhcCCC-------CCCCc
Confidence             23568999999999987764       3456789999886543100  00000 0111111110111       12367


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ..+|+|++++.++.....  ...+..+.+.+|.
T Consensus       212 ~pe~vA~~v~~l~s~~~~--~~tG~~i~vdgG~  242 (244)
T 1zmo_A          212 RPDEMGALITFLASRRAA--PIVGQFFAFTGGY  242 (244)
T ss_dssp             CHHHHHHHHHHHHTTTTG--GGTTCEEEESTTC
T ss_pred             CHHHHHHHHHHHcCcccc--CccCCEEEeCCCC
Confidence            899999999999875322  1234588887763

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.82  E-value=1.7e-19  Score=163.58  Aligned_cols=199  Identities=14%  Similarity=0.062  Sum_probs=143.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCC---hhhh---hhhCCCcceEEEeeCCCcccHHHHHHHh-
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPL---PQLL---LDALPHSFVFFDVDLKSGSGFDAVALKF-   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~---~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   74 (320)
                      +++||||||+|+||.++++.|+++|   + .|++++|+...   ...+   +...+..+.++.+|++|++++.++++.+ 
T Consensus       226 ~~~vLITGgtGgIG~~la~~La~~G---~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~  302 (486)
T 2fr1_A          226 TGTVLVTGGTGGVGGQIARWLARRG---APHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG  302 (486)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHT---CSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcC---CCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence            5799999999999999999999999   6 48888998642   2222   2233456888999999999999988753 


Q ss_pred             --CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           75 --GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        75 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                        +.+|+|||+||.....    .+..+.+..++.|+.++. ++.+++.+.+.++||++||...+-...          ..
T Consensus       303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~-~L~~~~~~~~~~~~V~~SS~a~~~g~~----------g~  371 (486)
T 2fr1_A          303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGAR-NLHELTRELDLTAFVLFSSFASAFGAP----------GL  371 (486)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHH-HHHHHHTTSCCSEEEEEEEHHHHTCCT----------TC
T ss_pred             hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHH-HHHHHhCcCCCCEEEEEcChHhcCCCC----------CC
Confidence              3469999999986432    122344577889999996 999999988888999999976543221          25


Q ss_pred             chHHHHHHHHHHHHHH---HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHH
Q 020880          149 NVYGKSKVAAEKFIYE---KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII  225 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  225 (320)
                      ..|+.+|...+.+.+.   .+.++++++|+.+.+++-.   ..     .....+         ......+++.+|+++++
T Consensus       372 ~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~---~~-----~~~~~~---------~~~g~~~i~~e~~a~~l  434 (486)
T 2fr1_A          372 GGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMA---EG-----PVADRF---------RRHGVIEMPPETACRAL  434 (486)
T ss_dssp             TTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC--------------------C---------TTTTEECBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCccc---ch-----hHHHHH---------HhcCCCCCCHHHHHHHH
Confidence            6899999999987654   3678999999999876421   00     000001         01122469999999999


Q ss_pred             HHHHhhh
Q 020880          226 LALTNRW  232 (320)
Q Consensus       226 ~~~~~~~  232 (320)
                      ..++...
T Consensus       435 ~~~l~~~  441 (486)
T 2fr1_A          435 QNALDRA  441 (486)
T ss_dssp             HHHHHTT
T ss_pred             HHHHhCC
Confidence            9999864

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.82  E-value=7.1e-20  Score=154.22  Aligned_cols=224  Identities=16%  Similarity=0.127  Sum_probs=149.9

Q ss_pred             CcEEEEEcC--CChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hC
Q 020880            3 KKRVLVVGG--TGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FG   75 (320)
Q Consensus         3 ~~~ilItGa--tG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~   75 (320)
                      +|+++||||  +|+||++++++|+++|   ++|++.+|+.++ .+.+.+..+..+.++.+|++|+++++++++.    ++
T Consensus         7 ~k~vlVTGa~~s~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            7 GKRILVSGIITDSSIAFHIARVAQEQG---AQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTT---CEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCCCchHHHHHHHHHHCC---CEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            579999999  9999999999999999   899999998654 2444444555678899999999988777753    45


Q ss_pred             ---CCCEEEECCCccCc---------cccccCchhhhhccccccHHHHHhhhhhcc--CceEEEeechhhhcccCCCCcc
Q 020880           76 ---QPDVVVNCAALSVP---------RVCENDPDSAMSINVPSSLVNWLSSFTENK--ENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        76 ---~~d~Vih~a~~~~~---------~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~--~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                         ++|+|||+||....         ..+..+++..+++|+.+++ ++++++...-  ..+||++||...++        
T Consensus        84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~g~iv~iss~~~~~--------  154 (269)
T 2h7i_A           84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA-SMAKALLPIMNPGGSIVGMDFDPSRA--------  154 (269)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHGGGEEEEEEEEEEECCCSSC--------
T ss_pred             CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHH-HHHHHHHHhhccCCeEEEEcCccccc--------
Confidence               79999999997641         1122345677899999986 8888776431  14899999876532        


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHH------HHHHHhcCCceEee
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQW------IDSVLSKGEKVEFF  208 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~  208 (320)
                         ..+...|+.+|...+.+.+.+       +.++.+++|+.+..+-.............      +...+....++   
T Consensus       155 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---  228 (269)
T 2h7i_A          155 ---MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI---  228 (269)
T ss_dssp             ---CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT---
T ss_pred             ---cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCc---
Confidence               123568999999999877654       35678899998854310000000000000      00001011111   


Q ss_pred             cCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          209 HDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       209 ~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                         .+.+...+|+|++++.++.....  ...+.++++.+|.
T Consensus       229 ---~rr~~~p~dvA~~v~~L~s~~~~--~itG~~i~vdGG~  264 (269)
T 2h7i_A          229 ---GWNMKDATPVAKTVCALLSDWLP--ATTGDIIYADGGA  264 (269)
T ss_dssp             ---CCCTTCCHHHHHHHHHHHSSSCT--TCCSEEEEESTTG
T ss_pred             ---ccCCCCHHHHHHHHHHHhCchhc--cCcceEEEecCCe
Confidence               11357789999999999865321  1235588888764

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.82  E-value=1.2e-19  Score=156.18  Aligned_cols=198  Identities=13%  Similarity=0.113  Sum_probs=138.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh----CCCcceEEEeeCCCc-ccHHHHHH----H
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA----LPHSFVFFDVDLKSG-SGFDAVAL----K   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~d~-~~~~~~~~----~   73 (320)
                      +|+||||||+|+||.+++++|+++|   ++|++.+|+.++.....+.    .+.++.++.+|++|+ ++++.+++    .
T Consensus        12 ~k~vlITGas~GIG~~~a~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           12 RRCAVVTGGNKGIGFEICKQLSSNG---IMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CcEEEEecCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            5789999999999999999999999   8999999997665443332    234688899999998 77766664    3


Q ss_pred             hCCCCEEEECCCccCcc----------------------------------ccccCchhhhhccccccHHHHHhhh----
Q 020880           74 FGQPDVVVNCAALSVPR----------------------------------VCENDPDSAMSINVPSSLVNWLSSF----  115 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----------------------------------~~~~~~~~~~~~n~~~~~~~~l~~~----  115 (320)
                      ++++|+|||+||.....                                  .....++..+++|+.+++ .+++++    
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~l  167 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVK-SVTEVLIPLL  167 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHH-HHHHHHHHHH
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHH-HHHHHhhHhh
Confidence            46899999999986421                                  112234566899999985 666665    


Q ss_pred             hhccCceEEEeechhhhcccCC---------------------------------CCcccCCCCCcchHHHHHHHHHHHH
Q 020880          116 TENKENLLIHLSTDQVYEGVKS---------------------------------FYKEEDEIAPVNVYGKSKVAAEKFI  162 (320)
Q Consensus       116 ~~~~~~~~v~~Ss~~vy~~~~~---------------------------------~~~E~~~~~p~~~Y~~sK~~~e~~~  162 (320)
                      ++.+..+||++||...+.....                                 ...+...+.+...|+.||...+.+.
T Consensus       168 ~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~  247 (311)
T 3o26_A          168 QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT  247 (311)
T ss_dssp             TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred             ccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence            4455569999999876532210                                 0111112234578999999999988


Q ss_pred             HHHc-----CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhh
Q 020880          163 YEKC-----SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       163 ~~~~-----~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  232 (320)
                      +.+.     .++..++||.|..+-..                  +          ......++.++.++.++..+
T Consensus       248 ~~la~e~~~i~v~~v~PG~v~T~~~~------------------~----------~~~~~~~~~a~~~~~~~~~~  294 (311)
T 3o26_A          248 RVLANKIPKFQVNCVCPGLVKTEMNY------------------G----------IGNYTAEEGAEHVVRIALFP  294 (311)
T ss_dssp             HHHHHHCTTSEEEEECCCSBCSGGGT------------------T----------CCSBCHHHHHHHHHHHHTCC
T ss_pred             HHHHhhcCCceEEEecCCceecCCcC------------------C----------CCCCCHHHHHHHHHHHHhCC
Confidence            7753     24566888887543210                  0          01246788999998888764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.82  E-value=1.9e-19  Score=154.91  Aligned_cols=207  Identities=16%  Similarity=0.138  Sum_probs=140.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC---------CCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH---------STPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      .+|+++||||+|+||+++++.|+++|   ++|++.+|         +.++.....+.+........+|+.|.+++.++++
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~G---a~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERG---ALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   84 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHH
Confidence            46899999999999999999999999   88888644         4433333322221111124689999987766543


Q ss_pred             ----HhCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhh-hcccCCCC
Q 020880           73 ----KFGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQV-YEGVKSFY  139 (320)
Q Consensus        73 ----~~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~v-y~~~~~~~  139 (320)
                          .++++|+|||+||.....    .+..+++..+++|+.+++ ++++++    ++.+..+||++||... ++.     
T Consensus        85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~~~m~~~~~grIV~vsS~~~~~~~-----  158 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSF-QVTRAAWDHMKKQNYGRIIMTASASGIYGN-----  158 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCCEEEEECChhhccCC-----
Confidence                456899999999976442    123445678999999986 666665    4455569999999754 442     


Q ss_pred             cccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcc
Q 020880          140 KEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       140 ~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                            .+...|+.||...+.+.+.+       +.++.+++|+.+ .+-.    ......                  ..
T Consensus       159 ------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~----~~~~~~------------------~~  209 (319)
T 1gz6_A          159 ------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT----ETVMPE------------------DL  209 (319)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT----GGGSCH------------------HH
T ss_pred             ------CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc----cccCCh------------------hh
Confidence                  13668999999999987764       345678999876 2210    000000                  01


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ..++..+|+|.+++.++..+.   ...+.+|++.+|.
T Consensus       210 ~~~~~p~dvA~~~~~l~s~~~---~~tG~~~~v~GG~  243 (319)
T 1gz6_A          210 VEALKPEYVAPLVLWLCHESC---EENGGLFEVGAGW  243 (319)
T ss_dssp             HHHSCGGGTHHHHHHHTSTTC---CCCSCEEEEETTE
T ss_pred             hccCCHHHHHHHHHHHhCchh---hcCCCEEEECCCe
Confidence            124678999999999886531   2235688887763

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.81  E-value=1.4e-19  Score=149.53  Aligned_cols=219  Identities=14%  Similarity=0.087  Sum_probs=151.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHH----HhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVAL----KFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----~~~   75 (320)
                      +|+++||||++-||.++++.|.++|   .+|+..+|+++..++..+.   .+.++..+.+|++|+++++++++    .++
T Consensus         9 gKvalVTGas~GIG~aia~~la~~G---a~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (255)
T 4g81_D            9 GKTALVTGSARGLGFAYAEGLAAAG---ARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI   85 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTT---CEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            6899999999999999999999999   8999999987665544332   24567788999999999877664    457


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hh-ccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TE-NKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~-~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|++||+||.....    .+.++++..+++|+.+++ .+.+++    .+ .+-.+||++||...+....          
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~-~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~----------  154 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAF-LVSRSAAKRMIARNSGGKIINIGSLTSQAARP----------  154 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT----------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHccCCCEEEEEeehhhcCCCC----------
Confidence            899999999986542    234466788999999986 555544    22 2345999999998764332          


Q ss_pred             CcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      ....|+.+|.....+.+.+.       .++-.+.||.|.-+-.......    ......+....|+.       -+...+
T Consensus       155 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~----~~~~~~~~~~~Pl~-------R~g~pe  223 (255)
T 4g81_D          155 TVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED----KQFDSWVKSSTPSQ-------RWGRPE  223 (255)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC----HHHHHHHHHHSTTC-------SCBCGG
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC----HHHHHHHHhCCCCC-------CCcCHH
Confidence            25689999999998777642       3456789988854421100000    01111121222221       256789


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      |+|.+++.++....+  --.+.++.+.+|
T Consensus       224 diA~~v~fL~S~~a~--~iTG~~i~VDGG  250 (255)
T 4g81_D          224 ELIGTAIFLSSKASD--YINGQIIYVDGG  250 (255)
T ss_dssp             GGHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred             HHHHHHHHHhCchhC--CCcCCEEEECCC
Confidence            999999998865322  123458888776

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.81  E-value=3.4e-18  Score=141.87  Aligned_cols=223  Identities=15%  Similarity=0.109  Sum_probs=150.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhh--hhCCCcceEEEeeCCCcccHHHHH----HHhCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL--DALPHSFVFFDVDLKSGSGFDAVA----LKFGQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~----~~~~~   76 (320)
                      +|++|||||++-||.++++.|.++|   .+|+...|+.+......  ...+.+..++.+|++|++++++++    +.+++
T Consensus         7 gKvalVTGas~GIG~aia~~la~~G---a~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~   83 (258)
T 4gkb_A            7 DKVVIVTGGASGIGGAISMRLAEER---AIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGR   83 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999   89999999877643221  222457888999999999876655    45689


Q ss_pred             CCEEEECCCccCcc---ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           77 PDVVVNCAALSVPR---VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        77 ~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      +|++||+||.....   ...++++..+++|+.+++ .+.+++    ++.+ .++|++||...+.+..          ...
T Consensus        84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~-~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~----------~~~  151 (258)
T 4gkb_A           84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYY-AMAHYCVPHLKATR-GAIVNISSKTAVTGQG----------NTS  151 (258)
T ss_dssp             CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHT-CEEEEECCTHHHHCCS----------SCH
T ss_pred             CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcC-CeEEEEeehhhccCCC----------Cch
Confidence            99999999975432   223456778899999986 555544    3333 4999999988764322          256


Q ss_pred             hHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCC-CChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          150 VYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPK-SLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      .|+.+|...+.+.+.+       +.++-.+.||.|--+-....... ........... ...|+      .+-+...+|+
T Consensus       152 ~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~-~~~pl------g~R~g~peei  224 (258)
T 4gkb_A          152 GYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIA-AKVPL------GRRFTTPDEI  224 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHH-TTCTT------TTSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHH-hcCCC------CCCCcCHHHH
Confidence            8999999999977654       34567799998865432110000 00001111111 12221      0235779999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCCC
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |.+++.++....+  --.+.++.+.+|-
T Consensus       225 A~~v~fLaS~~a~--~iTG~~i~VDGG~  250 (258)
T 4gkb_A          225 ADTAVFLLSPRAS--HTTGEWLFVDGGY  250 (258)
T ss_dssp             HHHHHHHHSGGGT--TCCSCEEEESTTT
T ss_pred             HHHHHHHhCchhc--CccCCeEEECCCc
Confidence            9999998865432  1235589998874

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.81  E-value=1.9e-19  Score=150.75  Aligned_cols=209  Identities=14%  Similarity=0.089  Sum_probs=141.1

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhh---ccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSE---IEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~---~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      |.+|++|||||+|+||++++++|++   +|   ++|++.+|+.+......+.+     +..+.++.+|++|++++.++++
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~   80 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPG---SVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLS   80 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTT---CEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCC---CeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHH
Confidence            4578999999999999999999999   89   89999999876555443332     3457889999999999888776


Q ss_pred             Hh------CCCC--EEEECCCccCc--c-----ccccCchhhhhccccccHHHHHhhhhh----c--cCceEEEeechhh
Q 020880           73 KF------GQPD--VVVNCAALSVP--R-----VCENDPDSAMSINVPSSLVNWLSSFTE----N--KENLLIHLSTDQV  131 (320)
Q Consensus        73 ~~------~~~d--~Vih~a~~~~~--~-----~~~~~~~~~~~~n~~~~~~~~l~~~~~----~--~~~~~v~~Ss~~v  131 (320)
                      .+      +++|  +|||+||....  .     .+..+++..+++|+.+++ ++++++..    .  +..+||++||...
T Consensus        81 ~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
T 1oaa_A           81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSML-CLTSGTLNAFQDSPGLSKTVVNISSLCA  159 (259)
T ss_dssp             HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHH-HHHHHHHHTSCCCTTCEEEEEEECCGGG
T ss_pred             HHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHhhccCCCceEEEEcCchh
Confidence            44      3578  99999997532  1     223456778999999986 77777743    2  3358999999988


Q ss_pred             hcccCCCCcccCCCCCcchHHHHHHHHHHHHHHHcC-----CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceE
Q 020880          132 YEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCS-----NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVE  206 (320)
Q Consensus       132 y~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~-----~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (320)
                      +.+.          .+...|+.+|...+.+.+.+..     ++..++|+.+-.+-.............. ..+....   
T Consensus       160 ~~~~----------~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~---  225 (259)
T 1oaa_A          160 LQPY----------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELR-SKLQKLK---  225 (259)
T ss_dssp             TSCC----------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHH-HHHHHHH---
T ss_pred             cCCC----------CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHH-HHHHHhh---
Confidence            7432          2467899999999998877532     3345667665322100000000000000 0000000   


Q ss_pred             eecCcccCceeHHHHHHHHHHHHhh
Q 020880          207 FFHDECRCPVYVRDVVKIILALTNR  231 (320)
Q Consensus       207 ~~~~~~~~~i~v~D~a~~~~~~~~~  231 (320)
                          ....+...+|+|++++.++..
T Consensus       226 ----p~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          226 ----SDGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             ----HTTCSBCHHHHHHHHHHHHHH
T ss_pred             ----hcCCcCCHHHHHHHHHHHHhh
Confidence                023468999999999998874

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.81  E-value=7.2e-21  Score=164.53  Aligned_cols=173  Identities=13%  Similarity=0.151  Sum_probs=121.8

Q ss_pred             CC-CcEEEEEcCCChhhHHHHHHHhhccC----CCceEEEecCCCC--ChhhhhhhC-CCcceEEEeeCCCcccHHHHHH
Q 020880            1 MS-KKRVLVVGGTGYLGQHLLQGLSEIEG----KPYDVAATHHSTP--LPQLLLDAL-PHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         1 m~-~~~ilItGatG~IG~~l~~~L~~~g~----~v~~v~~~~r~~~--~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      |+ .|||+||||+||||++++..|+++|+    .+.+|+++++.+.  +.......+ ...+.++ +|+.+.+++.+.++
T Consensus         1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~   79 (327)
T 1y7t_A            1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFK   79 (327)
T ss_dssp             CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhC
Confidence            54 46899999999999999999999883    1127888887641  111111111 1112333 68877666666665


Q ss_pred             HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-Cc-eEEEeechhhhcccCCCCc-ccC-CCCCc
Q 020880           73 KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-EN-LLIHLSTDQVYEGVKSFYK-EED-EIAPV  148 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy~~~~~~~~-E~~-~~~p~  148 (320)
                         ++|+|||+||....+  ..++...++.|+.++. ++++++++.+ .+ +++++|+..-.   ..++. |.. ...|.
T Consensus        80 ---~~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~-~l~~a~~~~~~~~~~vvv~snp~~~---~~~~~~~~~~~~~p~  150 (327)
T 1y7t_A           80 ---DADYALLVGAAPRKA--GMERRDLLQVNGKIFT-EQGRALAEVAKKDVKVLVVGNPANT---NALIAYKNAPGLNPR  150 (327)
T ss_dssp             ---TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHH-HHHHHHHHHSCTTCEEEECSSSHHH---HHHHHHHTCTTSCGG
T ss_pred             ---CCCEEEECCCcCCCC--CCCHHHHHHHHHHHHH-HHHHHHHhhcCCCeEEEEeCCchhh---hHHHHHHHcCCCChh
Confidence               899999999986433  3467889999999995 9999999875 54 78888775410   00111 222 35577


Q ss_pred             chHHHHHHHHHHHHHH----HcCCeeEEeecccccCCCC
Q 020880          149 NVYGKSKVAAEKFIYE----KCSNFAILRSSIIYGPQTI  183 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~----~~~~~~ilR~~~v~G~~~~  183 (320)
                      .+|+.+|...|++...    ++.+.+++|+++|||++..
T Consensus       151 ~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          151 NFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS  189 (327)
T ss_dssp             GEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             heeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence            7899999999996654    4678899999999999763

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.80  E-value=2.3e-19  Score=155.09  Aligned_cols=165  Identities=19%  Similarity=0.227  Sum_probs=122.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh---hhhhh------CCCcceEEEeeCCCcccHHHHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ---LLLDA------LPHSFVFFDVDLKSGSGFDAVALK   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~---~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~   73 (320)
                      +|+||||||+|+||++++++|+++|   ++|+.+.|+.....   .....      .+.++.++.+|++|.+++.++++.
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G---~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   78 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDP---SQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARER   78 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCT---TCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHH
Confidence            5789999999999999999999999   66666666543322   22211      124678899999999999998875


Q ss_pred             h--CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccC
Q 020880           74 F--GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        74 ~--~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                      +  +++|+|||+||.....    ....+++..+++|+.+++ ++++++    ++.+..+||++||...+...        
T Consensus        79 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~p~m~~~~~g~IV~isS~~~~~~~--------  149 (327)
T 1jtv_A           79 VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV-RMLQAFLPDMKRRGSGRVLVTGSVGGLMGL--------  149 (327)
T ss_dssp             CTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEEEEGGGTSCC--------
T ss_pred             HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCEEEEECCcccccCC--------
Confidence            3  3699999999975432    122345678999999996 777775    44556799999998876432        


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCC
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQ  181 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~  181 (320)
                        .....|+.||...+.+.+.+       +.++.+++|+.|..+-
T Consensus       150 --~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          150 --PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             --CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence              23568999999999977754       3467889999997654

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.80  E-value=2.3e-18  Score=156.71  Aligned_cols=217  Identities=14%  Similarity=0.108  Sum_probs=153.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCC---hhhhh---hhCCCcceEEEeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPL---PQLLL---DALPHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~---~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      +++||||||+|+||.+++++|.++|   + .|+++.|+...   ...+.   ...+..+.++.+|++|.+++.++++. +
T Consensus       259 ~~~vLITGgtGgIG~~lA~~La~~G---~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~-~  334 (511)
T 2z5l_A          259 SGTVLITGGMGAIGRRLARRLAAEG---AERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA-Y  334 (511)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTT---CSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH-S
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC---CcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc-C
Confidence            5799999999999999999999999   6 58888887532   22222   22345688899999999999999886 4


Q ss_pred             CCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhhhhc-cCceEEEeechhh-hcccCCCCcccCCCCCcc
Q 020880           76 QPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTDQV-YEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~~v-y~~~~~~~~E~~~~~p~~  149 (320)
                      .+|+|||+||......    .....+..+++|+.++. ++.+++... +.++||++||... +|.           .+..
T Consensus       335 ~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~-~L~~~~~~~~~~~~~V~~SS~a~~~g~-----------~g~~  402 (511)
T 2z5l_A          335 PPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAE-LLHQLTADIKGLDAFVLFSSVTGTWGN-----------AGQG  402 (511)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHH-HHHHHTSSCTTCCCEEEEEEGGGTTCC-----------TTBH
T ss_pred             CCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHH-HHHHHHhhccCCCEEEEEeCHHhcCCC-----------CCCH
Confidence            7999999999865421    12234567789999996 999988876 7789999999854 442           1356


Q ss_pred             hHHHHHHHHHHHHHHH---cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHH
Q 020880          150 VYGKSKVAAEKFIYEK---CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL  226 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  226 (320)
                      .|+.+|...|.+.+..   +.++++++|+.+-+.+-    ......   ......          ...+++.+|+++++.
T Consensus       403 ~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm----~~~~~~---~~~~~~----------g~~~l~~e~~a~~l~  465 (511)
T 2z5l_A          403 AYAAANAALDALAERRRAAGLPATSVAWGLWGGGGM----AAGAGE---ESLSRR----------GLRAMDPDAAVDALL  465 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTC----CCCHHH---HHHHHH----------TBCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCCcc----cccccH---HHHHhc----------CCCCCCHHHHHHHHH
Confidence            8999999999988754   56889999998843221    111111   111111          123689999999999


Q ss_pred             HHHhhhhccccccCceeEecCCCCcCHHHHHHHHHH
Q 020880          227 ALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAE  262 (320)
Q Consensus       227 ~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~  262 (320)
                      .++..+..       .+.+.   .+.+..+...+..
T Consensus       466 ~al~~~~~-------~v~v~---~~d~~~~~~~~~~  491 (511)
T 2z5l_A          466 GAMGRNDV-------CVTVV---DVDWERFAPATNA  491 (511)
T ss_dssp             HHHHHTCS-------EEEEC---CBCHHHHHHHHHH
T ss_pred             HHHhCCCC-------EEEEE---eCCHHHHHhhhcc
Confidence            99987421       23333   2567666665543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.80  E-value=9.4e-19  Score=157.25  Aligned_cols=217  Identities=15%  Similarity=0.119  Sum_probs=148.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC--hhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----C
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL--PQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----G   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~   75 (320)
                      .++++|||||+|.||.++++.|.++|   .+|+++.|+...  ........  ...++.+|++|.+++.++++.+    +
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~G---a~Vvl~~r~~~~~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDG---ATVVAIDVDGAAEDLKRVADKV--GGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEECGGGHHHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCC---CEEEEEeCCccHHHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999   889888886432  12222222  3567899999999988777543    4


Q ss_pred             C-CCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc----cCceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 Q-PDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN----KENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~-~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      + +|+|||+||.....    .+.++++..+++|+.+++ ++.+++...    +..+||++||...+...          .
T Consensus       287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~-~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~----------~  355 (454)
T 3u0b_A          287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQ-RLTEGLVGNGTIGEGGRVIGLSSMAGIAGN----------R  355 (454)
T ss_dssp             TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHTTSSCTTCEEEEECCHHHHHCC----------T
T ss_pred             CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHH-HHHHHHHHhhhhcCCCEEEEEeChHhCCCC----------C
Confidence            4 99999999986542    223345678899999996 888887654    55699999998876432          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      +...|+.+|...+.+.+.+       +.++.+++|+.+..+-.... ..     ..........       ....+...+
T Consensus       356 g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~-----~~~~~~~~~~-------~l~r~g~pe  422 (454)
T 3u0b_A          356 GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI-PL-----ATREVGRRLN-------SLFQGGQPV  422 (454)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------------CHHHHHSB-------TTSSCBCHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc-ch-----hhHHHHHhhc-------cccCCCCHH
Confidence            3678999999877766543       35678899999976532110 00     0000010111       122356799


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+|+++.+++.....  ...+.++++.++.
T Consensus       423 dvA~~v~fL~s~~a~--~itG~~i~vdGG~  450 (454)
T 3u0b_A          423 DVAELIAYFASPASN--AVTGNTIRVCGQA  450 (454)
T ss_dssp             HHHHHHHHHHCGGGT--TCCSCEEEESSSB
T ss_pred             HHHHHHHHHhCCccC--CCCCcEEEECCcc
Confidence            999999999875432  2235589888764

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.78  E-value=1.6e-17  Score=141.90  Aligned_cols=220  Identities=14%  Similarity=0.061  Sum_probs=140.6

Q ss_pred             CCcEEEEEcCC--ChhhHHHHHHHhhccCCCceEEEecCC-----------CCChhhhhhhCCC-----cceEEEee---
Q 020880            2 SKKRVLVVGGT--GYLGQHLLQGLSEIEGKPYDVAATHHS-----------TPLPQLLLDALPH-----SFVFFDVD---   60 (320)
Q Consensus         2 ~~~~ilItGat--G~IG~~l~~~L~~~g~~v~~v~~~~r~-----------~~~~~~~~~~~~~-----~~~~~~~D---   60 (320)
                      .+|++|||||+  |+||.+++++|+++|   ++|++.+|+           .++.+.. ..+..     ....+.+|   
T Consensus         7 ~~k~~lVTGas~~~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            7 RGKRAFIAGIADDNGYGWAVAKSLAAAG---AEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTC
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCC---CeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceec
Confidence            35799999999  999999999999999   888887653           2222221 11110     01233333   


Q ss_pred             -----C----CC--------cccHHHHHH----HhCCCCEEEECCCccC---c---cccccCchhhhhccccccHHHHHh
Q 020880           61 -----L----KS--------GSGFDAVAL----KFGQPDVVVNCAALSV---P---RVCENDPDSAMSINVPSSLVNWLS  113 (320)
Q Consensus        61 -----l----~d--------~~~~~~~~~----~~~~~d~Vih~a~~~~---~---~~~~~~~~~~~~~n~~~~~~~~l~  113 (320)
                           +    +|        +++++++++    .++++|++||+||...   .   ..+..+++..+++|+.+++ ++++
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~  161 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFV-SLLS  161 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH-HHHH
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHH-HHHH
Confidence                 2    22        556655554    4568999999998642   1   1223445678999999996 8888


Q ss_pred             hhhhc--cCceEEEeechhhhcccCCCCcccCCCCCc-chHHHHHHHHHHHHHH--------HcCCeeEEeecccccCCC
Q 020880          114 SFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPV-NVYGKSKVAAEKFIYE--------KCSNFAILRSSIIYGPQT  182 (320)
Q Consensus       114 ~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~-~~Y~~sK~~~e~~~~~--------~~~~~~ilR~~~v~G~~~  182 (320)
                      ++...  ...++|++||...+....          +. ..|+.+|...+.+.+.        .+.++.+++|+.+..+..
T Consensus       162 ~~~~~m~~~g~iv~isS~~~~~~~~----------~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~  231 (297)
T 1d7o_A          162 HFLPIMNPGGASISLTYIASERIIP----------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAA  231 (297)
T ss_dssp             HHGGGEEEEEEEEEEECGGGTSCCT----------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCS
T ss_pred             HHHHHhccCceEEEEeccccccCCC----------CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchh
Confidence            87653  114899999987654321          23 4799999999986653        356778899999988754


Q ss_pred             CCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ...   .....+..... ...++       ..+...+|+|++++.++.....  ...+.++++.+|.
T Consensus       232 ~~~---~~~~~~~~~~~-~~~p~-------~r~~~pedvA~~v~~l~s~~~~--~itG~~i~vdgG~  285 (297)
T 1d7o_A          232 KAI---GFIDTMIEYSY-NNAPI-------QKTLTADEVGNAAAFLVSPLAS--AITGATIYVDNGL  285 (297)
T ss_dssp             SCC---SHHHHHHHHHH-HHSSS-------CCCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTTG
T ss_pred             hhc---cccHHHHHHhh-ccCCC-------CCCCCHHHHHHHHHHHhCcccc--CCCCCEEEECCCc
Confidence            211   11112222111 11121       2357899999999998865321  1235589998874

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.78  E-value=2.1e-17  Score=137.83  Aligned_cols=220  Identities=13%  Similarity=0.004  Sum_probs=146.2

Q ss_pred             CCcEEEEEcCCC--hhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh---hC-CCcceEEEeeCCCcccHHHHH----
Q 020880            2 SKKRVLVVGGTG--YLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD---AL-PHSFVFFDVDLKSGSGFDAVA----   71 (320)
Q Consensus         2 ~~~~ilItGatG--~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~---~~-~~~~~~~~~Dl~d~~~~~~~~----   71 (320)
                      .+|+++||||+|  -||.++++.|.++|   .+|++..|+++..+...+   .. +..+.++.+|++|++++.+++    
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~G---a~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLG---AKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            378999999987  79999999999999   899999998766544433   22 346788999999999877665    


Q ss_pred             HHhCCCCEEEECCCccCccc-----cc---cCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcc
Q 020880           72 LKFGQPDVVVNCAALSVPRV-----CE---NDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        72 ~~~~~~d~Vih~a~~~~~~~-----~~---~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                      +.++++|++||+||......     .+   +++...+++|+.+.+ .+..++...  +-.+||++||.......      
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~-~~~~~~~~~~~~~G~IVnisS~~~~~~~------  154 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLT-IVAHEAKKLMPEGGSIVATTYLGGEFAV------  154 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHTTCTTCEEEEEEECGGGTSCC------
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHH-HHHHHHHHHhccCCEEEEEeccccccCc------
Confidence            45689999999999754321     11   123345677887764 444444321  12389999998765322      


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                          .....|+.+|...+.+.+.+.       .++-.+.||.+--+.....   ......... +....|+.       -
T Consensus       155 ----~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~---~~~~~~~~~-~~~~~Pl~-------R  219 (256)
T 4fs3_A          155 ----QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGV---GGFNTILKE-IKERAPLK-------R  219 (256)
T ss_dssp             ----TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC---TTHHHHHHH-HHHHSTTS-------S
T ss_pred             ----ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhc---cCCHHHHHH-HHhcCCCC-------C
Confidence                236689999999998776642       3566799988754432111   011122222 22222322       2


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +...+|+|++++.++....+  --.+.++.+.+|
T Consensus       220 ~g~peevA~~v~fL~Sd~a~--~iTG~~i~VDGG  251 (256)
T 4fs3_A          220 NVDQVEVGKTAAYLLSDLSS--GVTGENIHVDSG  251 (256)
T ss_dssp             CCCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCchhc--CccCCEEEECcC
Confidence            56799999999999865322  123458888776

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.77  E-value=3.9e-18  Score=139.56  Aligned_cols=218  Identities=16%  Similarity=0.117  Sum_probs=150.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      +|+++||||++-||.++++.|.++|   .+|+...|+... ........+.+...+.+|++|+++++++++. +++|++|
T Consensus         9 GKvalVTGas~GIG~aiA~~la~~G---a~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~-g~iDiLV   84 (247)
T 4hp8_A            9 GRKALVTGANTGLGQAIAVGLAAAG---AEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTD-AGFDILV   84 (247)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTT-TCCCEEE
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHcC---CEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHh-CCCCEEE
Confidence            6899999999999999999999999   899999987542 2233344456788899999999998877654 5899999


Q ss_pred             ECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhcc-CceEEEeechhhhcccCCCCcccCCCCCcchHH
Q 020880           82 NCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENK-ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYG  152 (320)
Q Consensus        82 h~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~  152 (320)
                      |+||.....    .+.++++..+++|+.+++ .+.+++    .+.+ -.+||++||...+....          ....|+
T Consensus        85 NNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f-~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~----------~~~~Y~  153 (247)
T 4hp8_A           85 NNAGIIRRADSVEFSELDWDEVMDVNLKALF-FTTQAFAKELLAKGRSGKVVNIASLLSFQGGI----------RVPSYT  153 (247)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEEECCGGGTSCCS----------SCHHHH
T ss_pred             ECCCCCCCCCcccccHHHHHHHHHHHhHHHH-HHHHHHHHHHHHhCCCcEEEEEechhhCCCCC----------CChHHH
Confidence            999986542    234567788999999986 555543    3333 35999999988754322          256899


Q ss_pred             HHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHH
Q 020880          153 KSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII  225 (320)
Q Consensus       153 ~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  225 (320)
                      .||.....+.+.+.       .++-.+.||.|--|........    ......+....|+.       -+-..+|+|.++
T Consensus       154 asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~----~~~~~~~~~~~Plg-------R~g~peeiA~~v  222 (247)
T 4hp8_A          154 AAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRAD----AARNKAILERIPAG-------RWGHSEDIAGAA  222 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS----HHHHHHHHTTCTTS-------SCBCTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccC----HHHHHHHHhCCCCC-------CCcCHHHHHHHH
Confidence            99999999777643       3456688988854321000000    01111222232322       256789999999


Q ss_pred             HHHHhhhhccccccCceeEecCC
Q 020880          226 LALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +.++....+  ---+.++.+.+|
T Consensus       223 ~fLaSd~a~--~iTG~~i~VDGG  243 (247)
T 4hp8_A          223 VFLSSAAAD--YVHGAILNVDGG  243 (247)
T ss_dssp             HHHTSGGGT--TCCSCEEEESTT
T ss_pred             HHHhCchhc--CCcCCeEEECcc
Confidence            998865432  123458888776

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.75  E-value=1.1e-16  Score=133.11  Aligned_cols=217  Identities=17%  Similarity=0.181  Sum_probs=142.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~d   78 (320)
                      +|++|||||++-||.++++.|.++|   ++|+...|+.+...       ....++.+|++|++++..+++    +++++|
T Consensus        11 GK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   80 (261)
T 4h15_A           11 GKRALITAGTKGAGAATVSLFLELG---AQVLTTARARPEGL-------PEELFVEADLTTKEGCAIVAEATRQRLGGVD   80 (261)
T ss_dssp             TCEEEESCCSSHHHHHHHHHHHHTT---CEEEEEESSCCTTS-------CTTTEEECCTTSHHHHHHHHHHHHHHTSSCS
T ss_pred             CCEEEEeccCcHHHHHHHHHHHHcC---CEEEEEECCchhCC-------CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999   89999999754321       123458999999998776654    567899


Q ss_pred             EEEECCCccCc------cccccCchhhhhccccccHHHHHhh----hhhccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           79 VVVNCAALSVP------RVCENDPDSAMSINVPSSLVNWLSS----FTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        79 ~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      ++||+||....      +.+.++++..+++|+.+++ .+.++    +++.+-.++|++||....-+.         +...
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~-~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~---------~~~~  150 (261)
T 4h15_A           81 VIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAV-RLDRQLVPDMVARGSGVVVHVTSIQRVLPL---------PEST  150 (261)
T ss_dssp             EEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------TTTC
T ss_pred             EEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHH-HHHHhhchhhhhcCCceEEEEEehhhccCC---------CCcc
Confidence            99999996532      1223456788999999985 55444    445555699999998765321         1125


Q ss_pred             chHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCC---------CCCCCChHHHHHHHHhcCCceEeecCcc
Q 020880          149 NVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTIS---------PVPKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                      ..|+.||...+.+.+.+.       .++..+.||.|--+....         ..........+.. .....|+       
T Consensus       151 ~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Pl-------  222 (261)
T 4h15_A          151 TAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMD-GLGGIPL-------  222 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHH-HTTCCTT-------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHH-HhcCCCC-------
Confidence            679999999998777642       355678888774321000         0000000000000 0011111       


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .-+...+|+|+++++++.....  --.+.++.+.+|-
T Consensus       223 gR~g~peevA~~v~fLaS~~a~--~itG~~i~VDGG~  257 (261)
T 4h15_A          223 GRPAKPEEVANLIAFLASDRAA--SITGAEYTIDGGT  257 (261)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTC
T ss_pred             CCCcCHHHHHHHHHHHhCchhc--CccCcEEEECCcC
Confidence            2367899999999998865322  1235588888764

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.73  E-value=4.7e-17  Score=147.05  Aligned_cols=200  Identities=13%  Similarity=0.102  Sum_probs=145.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCC---Chhhhh---hhCCCcceEEEeeCCCcccHHHHHHHh-
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTP---LPQLLL---DALPHSFVFFDVDLKSGSGFDAVALKF-   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~---~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   74 (320)
                      ++++|||||+|.||.++++.|.++|   . .|++..|+..   ....+.   ...+..+.++.+|++|.+++.++++.+ 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~G---a~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~  315 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQG---AAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELP  315 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTT---CSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCC
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCC---CcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            3799999999999999999999999   5 7888888632   222222   233567889999999999999998754 


Q ss_pred             --CCCCEEEECCCcc-Ccc----ccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           75 --GQPDVVVNCAALS-VPR----VCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        75 --~~~d~Vih~a~~~-~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                        +.+|+|||+||.. ...    ....+.+..+++|+.++. ++.+.+...+..+||++||...+-..          ..
T Consensus       316 ~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~-~L~~~~~~~~~~~iV~~SS~a~~~g~----------~g  384 (496)
T 3mje_A          316 EDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAAR-HLHELTADLDLDAFVLFSSGAAVWGS----------GG  384 (496)
T ss_dssp             TTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHH-HHHHHHTTSCCSEEEEEEEHHHHTTC----------TT
T ss_pred             HhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHH-HHHHHhhccCCCEEEEEeChHhcCCC----------CC
Confidence              2589999999986 221    122334678899999996 99999998888899999997765322          23


Q ss_pred             cchHHHHHHHHHHHHHHH---cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK---CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI  224 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  224 (320)
                      ...|+.+|...+.+.+..   +.++.++.|+.+.+.+....  .    .........+  +        ..+..++.+++
T Consensus       385 ~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~--~----~~~~~l~~~g--~--------~~l~pe~~~~~  448 (496)
T 3mje_A          385 QPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATD--P----EVHDRLVRQG--V--------LAMEPEHALGA  448 (496)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC------------CHHHHHTT--E--------EEECHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCccccC--h----HHHHHHHhcC--C--------CCCCHHHHHHH
Confidence            668999999999887654   67889999998876543110  0    0011111111  1        13678999999


Q ss_pred             HHHHHhhh
Q 020880          225 ILALTNRW  232 (320)
Q Consensus       225 ~~~~~~~~  232 (320)
                      +..++..+
T Consensus       449 l~~~l~~~  456 (496)
T 3mje_A          449 LDQMLEND  456 (496)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHcCC
Confidence            99999874

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.72  E-value=3.1e-17  Score=152.99  Aligned_cols=208  Identities=14%  Similarity=0.085  Sum_probs=132.7

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC---------CCCChhhhhhhCCCcceEEEeeCCCcccHHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH---------STPLPQLLLDALPHSFVFFDVDLKSGSGFDAVA   71 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   71 (320)
                      |.+|+++||||+|.||.+++++|+++|   ++|++.+|         +.+......+.+......+.+|++|.+++.+++
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~G---a~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~   93 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERG---AKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVI   93 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHH
Confidence            357899999999999999999999999   89998887         444444433322111112468999998877766


Q ss_pred             H----HhCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCC
Q 020880           72 L----KFGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFY  139 (320)
Q Consensus        72 ~----~~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~  139 (320)
                      +    .++++|++||+||.....    .+.++++..+++|+.+++ ++++++    ++.+..+||++||.+.+...    
T Consensus        94 ~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~-~l~~~~~p~m~~~~~g~IV~isS~a~~~~~----  168 (613)
T 3oml_A           94 ETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSF-KCTQAAFPYMKKQNYGRIIMTSSNSGIYGN----  168 (613)
T ss_dssp             C----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHTTTCEEEEEECCHHHHHCC----
T ss_pred             HHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCEEEEECCHHHcCCC----
Confidence            4    345799999999986442    233456788999999986 777766    55555699999998765322    


Q ss_pred             cccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcc
Q 020880          140 KEEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       140 ~E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                            .+...|+.||...+.+.+.+.       .++..+.|+.+- +.    .......                  ..
T Consensus       169 ------~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t-~~----~~~~~~~------------------~~  219 (613)
T 3oml_A          169 ------FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS-RM----TEGILPD------------------IL  219 (613)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------CCCCCH------------------HH
T ss_pred             ------CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC-hh----hhhccch------------------hh
Confidence                  236689999999999877643       345668887531 10    0000000                  11


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ...+..+|+|.+++.++... .  ...+.++++.+|
T Consensus       220 ~~~~~pedvA~~v~~L~s~~-~--~~tG~~i~vdGG  252 (613)
T 3oml_A          220 FNELKPKLIAPVVAYLCHES-C--EDNGSYIESAAG  252 (613)
T ss_dssp             HTTCCGGGTHHHHHHTTSTT-C--CCCSCEEEEETT
T ss_pred             hhcCCHHHHHHHHHHhcCCC-c--CCCceEEEECCC
Confidence            23457899999999988764 1  123446666554

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.71  E-value=1.7e-16  Score=144.98  Aligned_cols=199  Identities=11%  Similarity=0.021  Sum_probs=141.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCce-EEEe-cCCC-------------CChhhhhh---hCCCcceEEEeeCCCc
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYD-VAAT-HHST-------------PLPQLLLD---ALPHSFVFFDVDLKSG   64 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~-v~~~-~r~~-------------~~~~~~~~---~~~~~~~~~~~Dl~d~   64 (320)
                      .+++|||||+|.||.++++.|.++|   .. |++. .|+.             +....+..   ..+..+.++.+|++|.
T Consensus       251 ~~~vLITGgsgGIG~~lA~~La~~G---~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          251 DGTVLVTGAEEPAAAEAARRLARDG---AGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA  327 (525)
T ss_dssp             TSEEEESSTTSHHHHHHHHHHHHHT---CCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcC---CCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH
Confidence            5799999999999999999999999   55 6666 7874             22223222   2245788899999999


Q ss_pred             ccHHHHHHHh---CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhcc-----CceEEEeechhhh
Q 020880           65 SGFDAVALKF---GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTENK-----ENLLIHLSTDQVY  132 (320)
Q Consensus        65 ~~~~~~~~~~---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-----~~~~v~~Ss~~vy  132 (320)
                      +++.++++.+   +.+|+|||+||.....    .+..+.+..+++|+.+++ ++.+++....     ..+||++||.+.+
T Consensus       328 ~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~-~L~~~~~~~~~~~~~~~~iV~~SS~a~~  406 (525)
T 3qp9_A          328 EAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAAL-HLDRLLREAAAAGGRPPVLVLFSSVAAI  406 (525)
T ss_dssp             HHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHH-HHHHHHHHTC----CCCEEEEEEEGGGT
T ss_pred             HHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHH-HHHHHhccccccCCCCCEEEEECCHHHc
Confidence            9999998754   4689999999986542    122344677899999996 8888887655     6799999998765


Q ss_pred             cccCCCCcccCCCCCcchHHHHHHHHHHHHHHH---cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec
Q 020880          133 EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK---CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH  209 (320)
Q Consensus       133 ~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (320)
                      -...          ....|+.+|...+.+.++.   +.++.++.|+.+ +.+-   .....    ....+... .     
T Consensus       407 ~g~~----------g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~-~tgm---~~~~~----~~~~~~~~-g-----  462 (525)
T 3qp9_A          407 WGGA----------GQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW-EGSR---VTEGA----TGERLRRL-G-----  462 (525)
T ss_dssp             TCCT----------TCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB-TTSG---GGSSH----HHHHHHHT-T-----
T ss_pred             CCCC----------CCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc-cccc---ccchh----hHHHHHhc-C-----
Confidence            4322          3678999999999987664   346788999988 3221   00111    11111111 1     


Q ss_pred             CcccCceeHHHHHHHHHHHHhhh
Q 020880          210 DECRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       210 ~~~~~~i~v~D~a~~~~~~~~~~  232 (320)
                         ...+..+++++++..++..+
T Consensus       463 ---~~~l~pee~a~~l~~~l~~~  482 (525)
T 3qp9_A          463 ---LRPLAPATALTALDTALGHG  482 (525)
T ss_dssp             ---BCCBCHHHHHHHHHHHHHHT
T ss_pred             ---CCCCCHHHHHHHHHHHHhCC
Confidence               12478999999999999874

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.69  E-value=8.4e-16  Score=132.22  Aligned_cols=222  Identities=18%  Similarity=0.063  Sum_probs=136.3

Q ss_pred             CcEEEEEcC--CChhhHHHHHHHhhccCCCceEEEecCCC-----------CChhhhhhhCC-C----cceEEEee----
Q 020880            3 KKRVLVVGG--TGYLGQHLLQGLSEIEGKPYDVAATHHST-----------PLPQLLLDALP-H----SFVFFDVD----   60 (320)
Q Consensus         3 ~~~ilItGa--tG~IG~~l~~~L~~~g~~v~~v~~~~r~~-----------~~~~~~~~~~~-~----~~~~~~~D----   60 (320)
                      +|+++||||  +|.||.+++++|+++|   ++|++..|++           ...... .... .    ...++.+|    
T Consensus         9 gk~~lVTGa~~s~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            9 GQTAFVAGVADSHGYGWAIAKHLASAG---ARVALGTWPPVLGLFQKSLQSGRLDED-RKLPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHTTT---CEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTTSCBCCCSCEEECCTTCS
T ss_pred             CCEEEEeCCCCCCChHHHHHHHHHHCC---CEEEEEecccccchhhhhhhhhhhhhh-hhhhcccccccccccccccccc
Confidence            478999999  8999999999999999   8898887642           111111 1111 0    12344444    


Q ss_pred             --------CCC--------cccHHHHHH----HhCCCCEEEECCCccC---c---cccccCchhhhhccccccHHHHHhh
Q 020880           61 --------LKS--------GSGFDAVAL----KFGQPDVVVNCAALSV---P---RVCENDPDSAMSINVPSSLVNWLSS  114 (320)
Q Consensus        61 --------l~d--------~~~~~~~~~----~~~~~d~Vih~a~~~~---~---~~~~~~~~~~~~~n~~~~~~~~l~~  114 (320)
                              ++|        +++++++++    .++++|++||+||...   .   .....+++..+++|+.+++ +++++
T Consensus        85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~-~l~~~  163 (315)
T 2o2s_A           85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFV-SLLQH  163 (315)
T ss_dssp             STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH-HHHHH
T ss_pred             ccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHH-HHHHH
Confidence                    332        556665554    4568999999999642   1   1223345678899999996 88888


Q ss_pred             hhhc--cCceEEEeechhhhcccCCCCcccCCCCCc-chHHHHHHHHHHHHHHH--------cCCeeEEeecccccCCCC
Q 020880          115 FTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPV-NVYGKSKVAAEKFIYEK--------CSNFAILRSSIIYGPQTI  183 (320)
Q Consensus       115 ~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~-~~Y~~sK~~~e~~~~~~--------~~~~~ilR~~~v~G~~~~  183 (320)
                      +...  .-.+||++||...+....          .. ..|+.+|...+.+.+.+        +.++..++||.|..+-..
T Consensus       164 ~~~~m~~~g~Iv~isS~~~~~~~~----------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~  233 (315)
T 2o2s_A          164 FGPIMNEGGSAVTLSYLAAERVVP----------GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAAS  233 (315)
T ss_dssp             HSTTEEEEEEEEEEEEGGGTSCCT----------TCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHH
T ss_pred             HHHHHhcCCEEEEEecccccccCC----------CccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhh
Confidence            7543  114899999988754321          12 47999999999866532        456678999988543110


Q ss_pred             CCC---CCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          184 SPV---PKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       184 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ...   ...+...... ......++       ..+...+|+|+++++++.....  ...+..+.+.+|.
T Consensus       234 ~~~~~~~~~~~~~~~~-~~~~~~p~-------~r~~~pedvA~~v~~L~s~~~~--~itG~~i~vdGG~  292 (315)
T 2o2s_A          234 AIGKSGEKSFIDYAID-YSYNNAPL-------RRDLHSDDVGGAALFLLSPLAR--AVSGVTLYVDNGL  292 (315)
T ss_dssp             HTTCSSSSCHHHHHHH-HHHHHSSS-------CCCCCHHHHHHHHHHHTSGGGT--TCCSCEEEESTTG
T ss_pred             hccccccchhHHHHHH-HHhccCCC-------CCCCCHHHHHHHHHHHhCchhc--cCcCCEEEECCCe
Confidence            000   0001011111 11111111       1256899999999999875322  1235588888764

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.65  E-value=1.5e-15  Score=131.00  Aligned_cols=224  Identities=15%  Similarity=0.052  Sum_probs=119.8

Q ss_pred             CcEEEEEcC--CChhhHHHHHHHhhccCCCceEEEecCCC-----------CChhh-----------hhhhCCC------
Q 020880            3 KKRVLVVGG--TGYLGQHLLQGLSEIEGKPYDVAATHHST-----------PLPQL-----------LLDALPH------   52 (320)
Q Consensus         3 ~~~ilItGa--tG~IG~~l~~~L~~~g~~v~~v~~~~r~~-----------~~~~~-----------~~~~~~~------   52 (320)
                      +|++|||||  +|.||.++++.|+++|   ++|++..|++           ++...           ..+.+..      
T Consensus         9 ~k~~lVTGa~~s~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            9 GKTAFVAGVADSNGYGWAICKLLRAAG---ARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             TCEEEEECCCCTTSHHHHHHHHHHHTT---CEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHCC---CEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            478999999  8999999999999999   8888887531           11111           0011100      


Q ss_pred             cceEEEee------------CCC--------cccHHHHHH----HhCCCCEEEECCCccC---c---cccccCchhhhhc
Q 020880           53 SFVFFDVD------------LKS--------GSGFDAVAL----KFGQPDVVVNCAALSV---P---RVCENDPDSAMSI  102 (320)
Q Consensus        53 ~~~~~~~D------------l~d--------~~~~~~~~~----~~~~~d~Vih~a~~~~---~---~~~~~~~~~~~~~  102 (320)
                      ...++.+|            ++|        ++++.++++    .++++|++||+||...   .   .....+++..+++
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v  165 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS  165 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence            02334443            333        345555544    4568999999998642   1   1223345678899


Q ss_pred             cccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCCc-chHHHHHHHHHHHHHH--------HcCCeeE
Q 020880          103 NVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPV-NVYGKSKVAAEKFIYE--------KCSNFAI  171 (320)
Q Consensus       103 n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~-~~Y~~sK~~~e~~~~~--------~~~~~~i  171 (320)
                      |+.+++ ++++++...  .-.+||++||...+....          .. ..|+.+|...+.+.+.        .+.++.+
T Consensus       166 N~~g~~-~l~~~~~~~m~~~g~Iv~isS~~~~~~~~----------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~  234 (319)
T 2ptg_A          166 SSYSFV-SLLQHFLPLMKEGGSALALSYIASEKVIP----------GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNC  234 (319)
T ss_dssp             HTHHHH-HHHHHHGGGEEEEEEEEEEEECC----------------------------THHHHHHHHHHHHHHHCCEEEE
T ss_pred             hhHHHH-HHHHHHHHHHhcCceEEEEeccccccccC----------ccchhhHHHHHHHHHHHHHHHHHhccccCeeEEE
Confidence            999996 787777653  114999999987653221          12 4799999988886653        3567788


Q ss_pred             EeecccccCCCCCCCCCCChHHHHHH---HHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          172 LRSSIIYGPQTISPVPKSLPIQWIDS---VLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       172 lR~~~v~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ++|+.|..+-........ ...+...   .+....+       ...+...+|+|++++.++.....  ...+.++.+.+|
T Consensus       235 v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~p-------~~r~~~peevA~~v~~L~s~~~~--~itG~~i~vdGG  304 (319)
T 2ptg_A          235 ISAGPLKSRAASAIGKAG-DKTFIDLAIDYSEANAP-------LQKELESDDVGRAALFLLSPLAR--AVTGATLYVDNG  304 (319)
T ss_dssp             EEECCCC---------------------------------------CCCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred             EeeCCccChhhhhccccc-chhhHHHHHHHHhccCC-------CCCCCCHHHHHHHHHHHhCcccC--CccCCEEEECCC
Confidence            999998654321000000 0000000   0000011       12357899999999999875322  223558888887


Q ss_pred             CC
Q 020880          249 DR  250 (320)
Q Consensus       249 ~~  250 (320)
                      ..
T Consensus       305 ~~  306 (319)
T 2ptg_A          305 LH  306 (319)
T ss_dssp             CT
T ss_pred             ce
Confidence            53

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.62  E-value=1.6e-14  Score=124.86  Aligned_cols=163  Identities=13%  Similarity=0.058  Sum_probs=111.7

Q ss_pred             CcEEEEEcCCC--hhhHHHHHHHhhccCCCceEEEecCCC---------CChhhh---hhh---CCCcceEEEeeCCCc-
Q 020880            3 KKRVLVVGGTG--YLGQHLLQGLSEIEGKPYDVAATHHST---------PLPQLL---LDA---LPHSFVFFDVDLKSG-   64 (320)
Q Consensus         3 ~~~ilItGatG--~IG~~l~~~L~~~g~~v~~v~~~~r~~---------~~~~~~---~~~---~~~~~~~~~~Dl~d~-   64 (320)
                      +|+++||||++  -||.+++++|+++|   ++|++.+|++         ++....   ...   ......++.+|+++. 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G---~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   78 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRN---VKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDT   78 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSS
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCC---CEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccc
Confidence            58999999875  99999999999999   8888665443         111111   111   012356788888887 


Q ss_pred             -c------------------cHHHHHH----HhCCCCEEEECCCccC---cc---ccccCchhhhhccccccHHHHHhhh
Q 020880           65 -S------------------GFDAVAL----KFGQPDVVVNCAALSV---PR---VCENDPDSAMSINVPSSLVNWLSSF  115 (320)
Q Consensus        65 -~------------------~~~~~~~----~~~~~d~Vih~a~~~~---~~---~~~~~~~~~~~~n~~~~~~~~l~~~  115 (320)
                       +                  ++.++++    .++++|++||+||...   ..   .+..+++..+++|+.+++ .+.+++
T Consensus        79 ~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~  157 (329)
T 3lt0_A           79 ANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLI-SLCKYF  157 (329)
T ss_dssp             GGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH-HHHHHH
T ss_pred             hhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHH-HHHHHH
Confidence             6                  6665554    4568999999999642   11   223345678999999986 776666


Q ss_pred             hhccC--ceEEEeechhhhcccCCCCcccCCCCCcc-hHHHHHHHHHHHHHH--------HcCCeeEEeeccccc
Q 020880          116 TENKE--NLLIHLSTDQVYEGVKSFYKEEDEIAPVN-VYGKSKVAAEKFIYE--------KCSNFAILRSSIIYG  179 (320)
Q Consensus       116 ~~~~~--~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~-~Y~~sK~~~e~~~~~--------~~~~~~ilR~~~v~G  179 (320)
                      ...=.  .+||++||...+.+..          ... .|+.||...+.+.+.        .+.++..+.||.|--
T Consensus       158 ~p~m~~~g~Iv~isS~~~~~~~~----------~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T  222 (329)
T 3lt0_A          158 VNIMKPQSSIISLTYHASQKVVP----------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCCT----------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             HHHHhhCCeEEEEeCccccCCCC----------cchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeec
Confidence            43211  4899999988654321          233 899999999986653        345677899998854

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.56  E-value=7.7e-14  Score=129.62  Aligned_cols=207  Identities=15%  Similarity=0.138  Sum_probs=134.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-ChhhhhhhCCCcceEEEeeC-CCccc-HHHHHHHhCCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-LPQLLLDALPHSFVFFDVDL-KSGSG-FDAVALKFGQPD   78 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~Dl-~d~~~-~~~~~~~~~~~d   78 (320)
                      ++|.++||||++-||.++++.|.++|   ++|++..|... .........+..+..+.+|+ .+.+. ++++.+.++++|
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~G---a~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iD  397 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYG---AKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTID  397 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCC---CEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCC
Confidence            35799999999999999999999999   88888776432 11122222234455567787 55443 445556678999


Q ss_pred             EEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcch
Q 020880           79 VVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNV  150 (320)
Q Consensus        79 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~  150 (320)
                      ++||+||.....    .+.++++..+++|+.+++ .+.+++    ++.+-.+||++||.+.+-..          .....
T Consensus       398 iLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~-~~~~~~~p~m~~~~~G~IVnisS~ag~~~~----------~~~~~  466 (604)
T 2et6_A          398 ILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTF-NLSRLAWPYFVEKQFGRIINITSTSGIYGN----------FGQAN  466 (604)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCEEEEEECCHHHHSCC----------TTBHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCCEEEEECChhhccCC----------CCChh
Confidence            999999976432    223456788999999986 555554    34444599999998764322          13568


Q ss_pred             HHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHH
Q 020880          151 YGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK  223 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  223 (320)
                      |+.||.....+.+.+.       .++..+.|+.  . ..  . ..    ....     .        ...+....+|+|.
T Consensus       467 Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~--~-T~--m-~~----~~~~-----~--------~~~~~~~pe~vA~  523 (604)
T 2et6_A          467 YSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA--E-TA--M-TL----SIMR-----E--------QDKNLYHADQVAP  523 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC--C-CC--C---------------------------CCSSCGGGTHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC--C-Cc--c-cc----ccCc-----h--------hhccCCCHHHHHH
Confidence            9999999998776542       3456688862  1 11  0 00    0000     0        0112457899999


Q ss_pred             HHHHHHhhhhccccccCceeEecCC
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ++++++.....   ..+.++.+.+|
T Consensus       524 ~v~~L~s~~~~---itG~~~~vdGG  545 (604)
T 2et6_A          524 LLVYLGTDDVP---VTGETFEIGGG  545 (604)
T ss_dssp             HHHHTTSTTCC---CCSCEEEEETT
T ss_pred             HHHHHhCCccC---CCCcEEEECCC
Confidence            99988765322   33557777665

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.53  E-value=2.4e-14  Score=139.98  Aligned_cols=200  Identities=16%  Similarity=0.165  Sum_probs=132.7

Q ss_pred             CCcEEEEEcCCCh-hhHHHHHHHhhccCCCceEEEe-cCCCCChhhhhhhC-------CCcceEEEeeCCCcccHHHHHH
Q 020880            2 SKKRVLVVGGTGY-LGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDAL-------PHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         2 ~~~~ilItGatG~-IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      ++|++|||||+|. ||.++++.|+++|   ++|+++ .|+.+......+.+       +..+.++.+|++|.+++.++++
T Consensus       475 ~GKvALVTGASgGGIGrAIAr~LA~~G---A~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          475 KDKYVLITGAGKGSIGAEVLQGLLQGG---AKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CSCCEEECSCSSSSTHHHHHHHHHHHT---CEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHHCc---CEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            4578999999999 9999999999999   888887 56655544333222       3457789999999999988876


Q ss_pred             H---------hC-CCCEEEECCCccCcc--cc-----ccCchhhhhccccccHHHHHhhhhh------ccCceEEEeech
Q 020880           73 K---------FG-QPDVVVNCAALSVPR--VC-----ENDPDSAMSINVPSSLVNWLSSFTE------NKENLLIHLSTD  129 (320)
Q Consensus        73 ~---------~~-~~d~Vih~a~~~~~~--~~-----~~~~~~~~~~n~~~~~~~~l~~~~~------~~~~~~v~~Ss~  129 (320)
                      .         ++ ++|+|||+||.....  ..     .++.+..+++|+.+++ .++++++.      .+..+||++||.
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~-~Ltqaa~~lp~M~krggGrIVnISSi  630 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMM-GCVKKQKSARGIETRPAQVILPMSPN  630 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHH-HHHHHHHHHHTCTTSCEEECCCCCSC
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHH-HHHHHHHhChHHHhCCCCEEEEEECh
Confidence            4         33 699999999976432  11     2334678899999986 77766622      222489999997


Q ss_pred             hhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHH-HcC------CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcC
Q 020880          130 QVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCS------NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKG  202 (320)
Q Consensus       130 ~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~-~~~------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  202 (320)
                      +...+            ....|+.||...+.+..+ ...      ++..+.||.+-|..-... ..     ...... ..
T Consensus       631 AG~~G------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~-~e-----~~~~~l-~~  691 (1688)
T 2pff_A          631 HGTFG------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA-NN-----IIAEGI-EK  691 (1688)
T ss_dssp             TTTSS------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCT-TT-----TCSTTT-SS
T ss_pred             HhccC------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCC-ch-----HHHHHH-Hh
Confidence            65432            245899999999998433 222      234577887764321000 00     000000 01


Q ss_pred             CceEeecCcccCceeHHHHHHHHHHHHhhh
Q 020880          203 EKVEFFHDECRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       203 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  232 (320)
                      .++        .+...+|+|++++.++...
T Consensus       692 ipl--------R~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          692 MGV--------RTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             SSC--------CCCCCCTTHHHHHHHTSTT
T ss_pred             CCC--------CCCCHHHHHHHHHHHhCCC
Confidence            111        2347889999999888654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.51  E-value=5.8e-14  Score=141.32  Aligned_cols=200  Identities=15%  Similarity=0.138  Sum_probs=135.1

Q ss_pred             CCcEEEEEcCCCh-hhHHHHHHHhhccCCCceEEEe-cCCCCChhhhhhh----C---CCcceEEEeeCCCcccHHHHHH
Q 020880            2 SKKRVLVVGGTGY-LGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDA----L---PHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         2 ~~~~ilItGatG~-IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~~~~~~----~---~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      ++|++|||||+|. ||.++++.|+++|   ++|+++ .|+.+......+.    +   +..+.++.+|++|.+++.++++
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~~G---A~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQGG---AKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHHTT---CEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCC---CEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            4689999999999 9999999999999   888887 5665444332221    1   3467889999999999888876


Q ss_pred             H---------hC-CCCEEEECCCccCcc--cc-----ccCchhhhhccccccHHHHHhhhhh------ccCceEEEeech
Q 020880           73 K---------FG-QPDVVVNCAALSVPR--VC-----ENDPDSAMSINVPSSLVNWLSSFTE------NKENLLIHLSTD  129 (320)
Q Consensus        73 ~---------~~-~~d~Vih~a~~~~~~--~~-----~~~~~~~~~~n~~~~~~~~l~~~~~------~~~~~~v~~Ss~  129 (320)
                      .         ++ ++|+|||+||.....  ..     .++.+..+++|+.+++ .++++++.      .+..+||++||.
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~-~l~~a~~~lp~m~~~~~G~IVnISS~  829 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMM-GCVKKQKSARGIETRPAQVILPMSPN  829 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHH-HHHHHHHHTTTCCSCCEEEEEEECSC
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhCCCCEEEEEcCh
Confidence            4         33 699999999986432  11     2334678899999986 77766522      222489999998


Q ss_pred             hhhcccCCCCcccCCCCCcchHHHHHHHHHHH-HHHHc------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcC
Q 020880          130 QVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKF-IYEKC------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKG  202 (320)
Q Consensus       130 ~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~-~~~~~------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  202 (320)
                      ..+.+            ....|+.||...+.+ .+.+.      .++..+.||.+-|..-... . ......    .. .
T Consensus       830 ag~~g------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~-~-~~~~~~----~~-~  890 (1887)
T 2uv8_A          830 HGTFG------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA-N-NIIAEG----IE-K  890 (1887)
T ss_dssp             TTCSS------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC------C-CTTHHH----HH-T
T ss_pred             HhccC------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccccccccc-c-hhHHHH----HH-h
Confidence            75432            245899999999998 44332      2345689998875321100 0 011111    11 1


Q ss_pred             CceEeecCcccCceeHHHHHHHHHHHHhhh
Q 020880          203 EKVEFFHDECRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       203 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  232 (320)
                      .++        .+...+|+|++++.++...
T Consensus       891 ~pl--------r~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          891 MGV--------RTFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             TSC--------CCEEHHHHHHHHHGGGSHH
T ss_pred             cCC--------CCCCHHHHHHHHHHHhCCC
Confidence            111        2458999999999988664

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.49  E-value=3.3e-13  Score=129.13  Aligned_cols=200  Identities=16%  Similarity=0.100  Sum_probs=140.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHh-hccCCCc-eEEEecCC---CCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHHh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLS-EIEGKPY-DVAATHHS---TPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~-~~g~~v~-~v~~~~r~---~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      .+++|||||+|-||..+++.|. ++|   . .|+...|+   .+....+.+   ..+..+.++.+|++|.+++.++++.+
T Consensus       530 ~~~~lItGg~~GlG~aiA~~la~~~G---a~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          530 AGTVLVTGGTGALGAEVARHLVIERG---VRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             TSEEEEETTTSHHHHHHHHHHHHTSS---CCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             ccceeeccCCCCcHHHHHHHHHHHcC---CcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            5789999999999999999999 789   6 58888998   333433333   23557888999999999999988754


Q ss_pred             C---CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           75 G---QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        75 ~---~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      .   .+|+|||+||.....    .+.++++..+++|+.+++ ++.+++. ... +||++||.+.+-...          .
T Consensus       607 ~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~-~l~~~~~-~~l-~iV~~SS~ag~~g~~----------g  673 (795)
T 3slk_A          607 PDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGAR-NLLELID-PDV-ALVLFSSVSGVLGSG----------G  673 (795)
T ss_dssp             CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHH-HHHHHSC-TTS-EEEEEEETHHHHTCS----------S
T ss_pred             HHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHH-HHHHHHh-hCC-EEEEEccHHhcCCCC----------C
Confidence            2   589999999986432    223445678999999996 8888883 344 899999987653322          3


Q ss_pred             cchHHHHHHHHHHHHHHH---cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK---CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI  224 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  224 (320)
                      ...|+.+|...+.+.++.   +.+...+.||.+-.++-.    .... ......+...         ....+..+++..+
T Consensus       674 ~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~----~~~~-~~~~~~~~~~---------g~~~l~~~e~~~~  739 (795)
T 3slk_A          674 QGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMA----STLR-EAEQDRLARS---------GLLPISTEEGLSQ  739 (795)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCCHH----HHHH-HHHHHHHHHT---------TBCCCCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcchhh----cccc-HHHHHHHHhc---------CCCCCCHHHHHHH
Confidence            678999999888877654   678888999887543310    0000 0011111111         1124677888888


Q ss_pred             HHHHHhhh
Q 020880          225 ILALTNRW  232 (320)
Q Consensus       225 ~~~~~~~~  232 (320)
                      +..++..+
T Consensus       740 ~~~~l~~~  747 (795)
T 3slk_A          740 FDAACGGA  747 (795)
T ss_dssp             HHHHHTSS
T ss_pred             HHHHHhCC
Confidence            88887763

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.48  E-value=1.3e-13  Score=138.50  Aligned_cols=200  Identities=17%  Similarity=0.121  Sum_probs=133.1

Q ss_pred             CCcEEEEEcCCCh-hhHHHHHHHhhccCCCceEEEec-CCCCChhhhh----hhC---CCcceEEEeeCCCcccHHHHHH
Q 020880            2 SKKRVLVVGGTGY-LGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLL----DAL---PHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         2 ~~~~ilItGatG~-IG~~l~~~L~~~g~~v~~v~~~~-r~~~~~~~~~----~~~---~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      .+|++|||||+|. ||.++++.|+++|   ++|+++. |+.+......    ..+   +..+.++.+|++|.+++.++++
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~~G---A~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLSGG---AKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHHTT---CEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCC---CEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            4589999999999 9999999999999   8888885 5444332211    221   3467889999999999988886


Q ss_pred             H-------hC-CCCEEEECCCccCcc--cc-----ccCchhhhhccccccHHHHHhhhh------hccCceEEEeechhh
Q 020880           73 K-------FG-QPDVVVNCAALSVPR--VC-----ENDPDSAMSINVPSSLVNWLSSFT------ENKENLLIHLSTDQV  131 (320)
Q Consensus        73 ~-------~~-~~d~Vih~a~~~~~~--~~-----~~~~~~~~~~n~~~~~~~~l~~~~------~~~~~~~v~~Ss~~v  131 (320)
                      .       ++ ++|+|||+||.....  ..     .++++..+++|+.+++ ++++.++      +.+..+||++||.+.
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~-~l~~a~~~lp~M~~~~~G~IVnISS~ag  806 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLL-GAIKTQKKERGYETRPAQVILPLSPNHG  806 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHH-HHHHHHHHHHTCCSCCEEECCEECSCSS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHH-HHHHHHHHhHHHHhCCCCEEEEEcchhh
Confidence            4       44 689999999976432  11     1335678899999885 6655421      222348999999865


Q ss_pred             hcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-----c--CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCc
Q 020880          132 YEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-----C--SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEK  204 (320)
Q Consensus       132 y~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-----~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  204 (320)
                      +.+            ....|+.+|...+.+.+.+     +  .++..+.||.+-|..-    ...  .......+. ..+
T Consensus       807 ~~g------------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m----~~~--~~~~~~~~~-~~p  867 (1878)
T 2uv9_A          807 TFG------------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGL----MSA--NNLVAEGVE-KLG  867 (1878)
T ss_dssp             SSS------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTS----CSH--HHHTHHHHH-TTT
T ss_pred             ccC------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcc----ccc--chhhHHHHH-hcC
Confidence            422            1457999999999886542     2  2445688888763211    000  011111121 111


Q ss_pred             eEeecCcccCceeHHHHHHHHHHHHhhh
Q 020880          205 VEFFHDECRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       205 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~  232 (320)
                      +        .+...+|+|++++.++...
T Consensus       868 l--------r~~sPeEVA~avlfLaSd~  887 (1878)
T 2uv9_A          868 V--------RTFSQQEMAFNLLGLMAPA  887 (1878)
T ss_dssp             C--------CCBCHHHHHHHHHHHHSHH
T ss_pred             C--------CCCCHHHHHHHHHHHhCCc
Confidence            1        2358999999999888653

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.47  E-value=7.9e-13  Score=114.66  Aligned_cols=165  Identities=14%  Similarity=0.061  Sum_probs=111.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhh-ccCCCceEEEecCCCCChh---------------hhhhhCCCcceEEEeeCCCccc
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSE-IEGKPYDVAATHHSTPLPQ---------------LLLDALPHSFVFFDVDLKSGSG   66 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~-~g~~v~~v~~~~r~~~~~~---------------~~~~~~~~~~~~~~~Dl~d~~~   66 (320)
                      .|++|||||++-||.++++.|.+ .|   .+|++..|+.+...               ......+.....+.+|++|+++
T Consensus        47 gKvaLVTGas~GIG~AiA~~LA~g~G---A~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           47 PKRVLVIGASTGYGLAARITAAFGCG---ADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred             CCEEEEeCcchHHHHHHHHHHHHhcC---CEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            58899999999999999999999 99   88988888755422               1223334567778999999998


Q ss_pred             HHHHHH----HhCCCCEEEECCCccC---------------c-----------------------cccccCchhhhhccc
Q 020880           67 FDAVAL----KFGQPDVVVNCAALSV---------------P-----------------------RVCENDPDSAMSINV  104 (320)
Q Consensus        67 ~~~~~~----~~~~~d~Vih~a~~~~---------------~-----------------------~~~~~~~~~~~~~n~  104 (320)
                      +.++++    .++++|++||+||...               +                       +.+.++++..+++|.
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~  203 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG  203 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence            776664    4578999999998631               0                       112234456677777


Q ss_pred             cccHHHHHhhhhh-----ccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH--------cCCeeE
Q 020880          105 PSSLVNWLSSFTE-----NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK--------CSNFAI  171 (320)
Q Consensus       105 ~~~~~~~l~~~~~-----~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~--------~~~~~i  171 (320)
                      .+.+..+++++..     .+ .++|.+||....-..        +......|+.+|...+.+.+.+        +.++-+
T Consensus       204 ~~~~~~~~~~~~~~~m~~~g-G~IVniSSi~~~~~~--------p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNa  274 (405)
T 3zu3_A          204 GEDWQMWIDALLDAGVLAEG-AQTTAFTYLGEKITH--------DIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARV  274 (405)
T ss_dssp             SHHHHHHHHHHHHHTCEEEE-EEEEEEECCCCGGGT--------TTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEE
T ss_pred             hhHHHHHHHHHHHHhhhhCC-cEEEEEeCchhhCcC--------CCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEE
Confidence            6553123333321     22 389999998654221        1111268999999999977653        234556


Q ss_pred             Eeeccccc
Q 020880          172 LRSSIIYG  179 (320)
Q Consensus       172 lR~~~v~G  179 (320)
                      +.|+.+--
T Consensus       275 VaPG~i~T  282 (405)
T 3zu3_A          275 SVLKAVVS  282 (405)
T ss_dssp             EECCCCCC
T ss_pred             EEeCCCcC
Confidence            77777643

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.46  E-value=5.2e-13  Score=116.82  Aligned_cols=167  Identities=15%  Similarity=0.068  Sum_probs=112.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhh-ccCCCceEEEecCCCCChh---------------hhhhhCCCcceEEEeeCCCccc
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSE-IEGKPYDVAATHHSTPLPQ---------------LLLDALPHSFVFFDVDLKSGSG   66 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~-~g~~v~~v~~~~r~~~~~~---------------~~~~~~~~~~~~~~~Dl~d~~~   66 (320)
                      .|++|||||++-||.++++.|.+ .|   .+|++..|+.+...               ......+.....+.+|++|+++
T Consensus        61 gKvaLVTGASsGIG~AiA~~LA~~~G---A~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           61 PKKVLVIGASSGYGLASRITAAFGFG---ADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAA  137 (422)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred             CCEEEEECCChHHHHHHHHHHHHhCC---CEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHH
Confidence            57999999999999999999999 99   89998888765432               2223334567779999999998


Q ss_pred             HHHHHH----Hh-CCCCEEEECCCcc-------------Cc-c------------------------ccccCchhhhhcc
Q 020880           67 FDAVAL----KF-GQPDVVVNCAALS-------------VP-R------------------------VCENDPDSAMSIN  103 (320)
Q Consensus        67 ~~~~~~----~~-~~~d~Vih~a~~~-------------~~-~------------------------~~~~~~~~~~~~n  103 (320)
                      +.++++    .+ +++|++||+||..             .. +                        .+.++++..+++|
T Consensus       138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn  217 (422)
T 3s8m_A          138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM  217 (422)
T ss_dssp             HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence            776654    56 7899999999862             10 0                        1122334556666


Q ss_pred             ccccHHHHHhhhhhc----cCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEE
Q 020880          104 VPSSLVNWLSSFTEN----KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAIL  172 (320)
Q Consensus       104 ~~~~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~il  172 (320)
                      ..+.+..+++++...    +-.++|.+||....-...        ......|+.||...+.+.+.+       +.++.++
T Consensus       218 ~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p--------~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaV  289 (422)
T 3s8m_A          218 GGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWP--------IYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVA  289 (422)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHH--------HHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred             chhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCC--------CccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEE
Confidence            554321333433221    123899999986542110        001258999999999977764       3456778


Q ss_pred             eecccccC
Q 020880          173 RSSIIYGP  180 (320)
Q Consensus       173 R~~~v~G~  180 (320)
                      .|+.|--+
T Consensus       290 aPG~i~T~  297 (422)
T 3s8m_A          290 VLKSVVTQ  297 (422)
T ss_dssp             EECCCCCT
T ss_pred             EcCCCcCh
Confidence            99888544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.45  E-value=4.8e-13  Score=124.31  Aligned_cols=225  Identities=15%  Similarity=0.161  Sum_probs=143.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC---------CChhhhhhhCC-CcceEEEeeCCCcccHHH--
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST---------PLPQLLLDALP-HSFVFFDVDLKSGSGFDA--   69 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~---------~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~--   69 (320)
                      .+|.++||||++-||.++++.|.++|   ++|++..|+.         +..+...+.+. ..-. ..+|+.|.+++++  
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~G---a~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v   82 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLG---AKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIV   82 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcC---CEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHH
Confidence            35789999999999999999999999   8888887654         33333222211 0112 3468888766444  


Q ss_pred             --HHHHhCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCC
Q 020880           70 --VALKFGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFY  139 (320)
Q Consensus        70 --~~~~~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~  139 (320)
                        +.+.++++|++||+||.....    .+.++++..+++|+.+++ .+.+++    ++.+-.+||++||....-...   
T Consensus        83 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~-~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~---  158 (604)
T 2et6_A           83 ETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAF-AVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF---  158 (604)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCCEEEEECCHHHcCCCC---
Confidence              445668899999999975432    233456788999999986 555544    344445999999987543221   


Q ss_pred             cccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcc
Q 020880          140 KEEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       140 ~E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                             ....|+.||.....+.+.+.       .++..+.|+ +   ..          .+... .   .+     ...
T Consensus       159 -------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~---~T----------~m~~~-~---~~-----~~~  208 (604)
T 2et6_A          159 -------GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-A---RS----------RMTES-I---MP-----PPM  208 (604)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-C---CC----------HHHHT-T---SC-----HHH
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-C---cC----------ccccc-c---CC-----hhh
Confidence                   25689999999998777643       345567774 2   11          01100 0   00     001


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCC------------------CCcCHHHHHHHHHHHhCCC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP------------------DRVSRVQMAEVVAEIRGYS  267 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~------------------~~~s~~e~~~~i~~~~~~~  267 (320)
                      ......+|+|.+++.++... .  ...+.++.+.+|                  ...+..++.+...+.....
T Consensus       209 ~~~~~pe~vA~~v~~L~s~~-~--~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  278 (604)
T 2et6_A          209 LEKLGPEKVAPLVLYLSSAE-N--ELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDYD  278 (604)
T ss_dssp             HTTCSHHHHHHHHHHHTSSS-C--CCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCCC
T ss_pred             hccCCHHHHHHHHHHHhCCc-c--cCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhchh
Confidence            12357899999999988653 1  122445655543                  3467788888777765443

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.36  E-value=1.5e-11  Score=108.50  Aligned_cols=166  Identities=15%  Similarity=0.056  Sum_probs=109.3

Q ss_pred             CcEEEEEcCCChhhHH--HHHHHhhccCCCceEEEecCCCCCh------------hh---hhhhCCCcceEEEeeCCCcc
Q 020880            3 KKRVLVVGGTGYLGQH--LLQGLSEIEGKPYDVAATHHSTPLP------------QL---LLDALPHSFVFFDVDLKSGS   65 (320)
Q Consensus         3 ~~~ilItGatG~IG~~--l~~~L~~~g~~v~~v~~~~r~~~~~------------~~---~~~~~~~~~~~~~~Dl~d~~   65 (320)
                      +|++|||||++-||.+  ++..|.++|   ++|++..|+....            ..   .....+..+..+.+|++|++
T Consensus        60 gK~aLVTGassGIG~A~aia~ala~~G---a~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~  136 (418)
T 4eue_A           60 PKKVLIVGASSGFGLATRISVAFGGPE---AHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNE  136 (418)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHSSSC---CEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHHhCC---CEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHH
Confidence            6899999999999999  999999999   8998888875432            11   22333456778999999999


Q ss_pred             cHHHHHHH----hCCCCEEEECCCcc-------------Cc-c------------------------ccccCchhhhhcc
Q 020880           66 GFDAVALK----FGQPDVVVNCAALS-------------VP-R------------------------VCENDPDSAMSIN  103 (320)
Q Consensus        66 ~~~~~~~~----~~~~d~Vih~a~~~-------------~~-~------------------------~~~~~~~~~~~~n  103 (320)
                      +++++++.    ++++|++||+||..             .. +                        ...++.+..+++|
T Consensus       137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            88776653    46899999999863             00 0                        0112233455555


Q ss_pred             ccccHHHHHhhhhhc----cCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH--------cCCeeE
Q 020880          104 VPSSLVNWLSSFTEN----KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK--------CSNFAI  171 (320)
Q Consensus       104 ~~~~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~--------~~~~~i  171 (320)
                      ..+.+..++.++...    +-.++|.+||....-..        +......|+.+|...+.+.+.+        +.++.+
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~--------p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~  288 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY--------KIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFV  288 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT--------TTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEE
T ss_pred             hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC--------CccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEE
Confidence            554321333333221    12389999997643221        1111268999999999866543        345667


Q ss_pred             Eeeccccc
Q 020880          172 LRSSIIYG  179 (320)
Q Consensus       172 lR~~~v~G  179 (320)
                      +.|+.|--
T Consensus       289 V~PG~v~T  296 (418)
T 4eue_A          289 SVNKALVT  296 (418)
T ss_dssp             EECCCCCC
T ss_pred             EECCcCcC
Confidence            88887753

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.32  E-value=2.6e-12  Score=93.58  Aligned_cols=100  Identities=18%  Similarity=0.174  Sum_probs=77.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|+|+|+|+ |++|+++++.|++.|.  ++|++..|++++...+.   ...+.++.+|+.+.+.+.++++   ++|+|||
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~--~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~   75 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSN--YSVTVADHDLAALAVLN---RMGVATKQVDAKDEAGLAKALG---GFDAVIS   75 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSS--EEEEEEESCHHHHHHHH---TTTCEEEECCTTCHHHHHHHTT---TCSEEEE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCC--ceEEEEeCCHHHHHHHH---hCCCcEEEecCCCHHHHHHHHc---CCCEEEE
Confidence            579999999 9999999999999984  67899999876555443   2456778999999888877765   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      +++...                  . .++++++.+.+++++...++..
T Consensus        76 ~~~~~~------------------~-~~~~~~~~~~g~~~~~~~~~~~  104 (118)
T 3ic5_A           76 AAPFFL------------------T-PIIAKAAKAAGAHYFDLTEDVA  104 (118)
T ss_dssp             CSCGGG------------------H-HHHHHHHHHTTCEEECCCSCHH
T ss_pred             CCCchh------------------h-HHHHHHHHHhCCCEEEecCcHH
Confidence            985310                  1 3788889999986655544444

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.24  E-value=6.3e-11  Score=125.23  Aligned_cols=161  Identities=16%  Similarity=0.064  Sum_probs=112.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCce-EEEecCCCCChh---hhhh---hCCCcceEEEeeCCCcccHHHHHHH--
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYD-VAATHHSTPLPQ---LLLD---ALPHSFVFFDVDLKSGSGFDAVALK--   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~-v~~~~r~~~~~~---~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~--   73 (320)
                      +++++||||+|-||..+++.|.++|   .+ |+...|+..+..   ...+   ..+..+.++.+|++|.+++.++++.  
T Consensus      1884 ~k~~lITGgs~GIG~aia~~la~~G---a~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1884 HKSYVITGGLGGFGLQLAQWLRLRG---AQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTT---CCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHCC---CCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999   65 778888865432   2221   2245677888999999998877754  


Q ss_pred             -hCCCCEEEECCCccCc----cccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCC
Q 020880           74 -FGQPDVVVNCAALSVP----RVCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        74 -~~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                       ++.+|+|||+||....    ..+.++++..+++|+.+++ ++.+++...  ...+||++||.+..-...          
T Consensus      1961 ~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~-~l~~~~~~~~~~~g~iV~iSS~ag~~g~~---------- 2029 (2512)
T 2vz8_A         1961 QLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTA-NLDRVTREACPELDYFVIFSSVSCGRGNA---------- 2029 (2512)
T ss_dssp             HHSCEEEEEECCCC----------------CTTTTHHHHH-HHHHHHHHHCTTCCEEEEECCHHHHTTCT----------
T ss_pred             hcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCEEEEecchhhcCCCC----------
Confidence             4579999999997532    2234566788999999996 776665432  235999999987653221          


Q ss_pred             CcchHHHHHHHHHHHHHH---HcCCeeEEeeccc
Q 020880          147 PVNVYGKSKVAAEKFIYE---KCSNFAILRSSII  177 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~---~~~~~~ilR~~~v  177 (320)
                      ....|+.+|...+.+.+.   .+.+...+..+.+
T Consensus      2030 g~~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2030 GQANYGFANSAMERICEKRRHDGLPGLAVQWGAI 2063 (2512)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCB
T ss_pred             CcHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCc
Confidence            256899999999998873   3566666666554

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.14  E-value=7.1e-12  Score=106.10  Aligned_cols=108  Identities=13%  Similarity=0.099  Sum_probs=78.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC--CcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--HSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      .+++++||||+|.||++++..|++.|   .+|+...|+.++.+.+.+.+.  ..+.++.+|++|++++.++++   ++|+
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G---~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~Dv  191 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEG---AEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK---GAHF  191 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT---TCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH---hCCE
Confidence            46899999999999999999999999   789999998666554443321  135568899999888877776   7899


Q ss_pred             EEECCCccCcc-----ccc-cCchhhhhccccccH----HHHHhhh
Q 020880           80 VVNCAALSVPR-----VCE-NDPDSAMSINVPSSL----VNWLSSF  115 (320)
Q Consensus        80 Vih~a~~~~~~-----~~~-~~~~~~~~~n~~~~~----~~~l~~~  115 (320)
                      |||+|+.....     ... ......+++|+.+..    ..+++.+
T Consensus       192 lVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~~i~~t~ll~~a  237 (287)
T 1lu9_A          192 VFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKG  237 (287)
T ss_dssp             EEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSCSBTTSCTTCEE
T ss_pred             EEECCCccccCCChhHcCchHHHHHHHHhhhhhhHHhhcchHHhhc
Confidence            99999753211     111 233456778877763    3566666

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.14  E-value=2.3e-11  Score=104.67  Aligned_cols=168  Identities=11%  Similarity=0.094  Sum_probs=103.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccC----CCceEEEecCC----CCChhhhhhhCCCc-ceEEEeeCCCcccHHHHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEG----KPYDVAATHHS----TPLPQLLLDALPHS-FVFFDVDLKSGSGFDAVALK   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~----~v~~v~~~~r~----~~~~~~~~~~~~~~-~~~~~~Dl~d~~~~~~~~~~   73 (320)
                      .|||+||||+||||++++..|+.+|.    .+.+|.+++++    +++.......+... .. +..|+....++.++++ 
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~-~~~~i~~~~~~~~al~-   82 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFP-LLAGMTAHADPMTAFK-   82 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCT-TEEEEEEESSHHHHTT-
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccc-ccCcEEEecCcHHHhC-
Confidence            47999999999999999999998873    01278887776    32222211111111 11 1246655556666665 


Q ss_pred             hCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-Cc-eEEEeechhh---hcccCCCCcccC-CCCC
Q 020880           74 FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-EN-LLIHLSTDQV---YEGVKSFYKEED-EIAP  147 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~-~~v~~Ss~~v---y~~~~~~~~E~~-~~~p  147 (320)
                        ++|+|||+||....  ...+....+..|+..+. ++++++.+.+ .+ ++|++|+..-   |--.     +.. -..+
T Consensus        83 --~aD~Vi~~ag~~~~--~g~~r~dl~~~N~~i~~-~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~-----~~~~~~p~  152 (329)
T 1b8p_A           83 --DADVALLVGARPRG--PGMERKDLLEANAQIFT-VQGKAIDAVASRNIKVLVVGNPANTNAYIAM-----KSAPSLPA  152 (329)
T ss_dssp             --TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHH-HHHHHHHHHSCTTCEEEECSSSHHHHHHHHH-----HTCTTSCG
T ss_pred             --CCCEEEEeCCCCCC--CCCCHHHHHHHHHHHHH-HHHHHHHHhcCCCeEEEEccCchHHHHHHHH-----HHcCCCCH
Confidence              89999999996532  22345678889999885 9999999874 55 8999987321   1000     001 0112


Q ss_pred             cchHHHHHHHHHH----HHHHHcCCeeEEeecccccCCC
Q 020880          148 VNVYGKSKVAAEK----FIYEKCSNFAILRSSIIYGPQT  182 (320)
Q Consensus       148 ~~~Y~~sK~~~e~----~~~~~~~~~~ilR~~~v~G~~~  182 (320)
                      ...++.++....+    +.+..+.+...++...|+|.+.
T Consensus       153 ~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg  191 (329)
T 1b8p_A          153 KNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHS  191 (329)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSS
T ss_pred             HHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccC
Confidence            2245555554444    3344566666677667788653

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.99  E-value=1.9e-09  Score=114.23  Aligned_cols=230  Identities=13%  Similarity=0.080  Sum_probs=137.2

Q ss_pred             CCCcEEEEEcCCCh-hhHHHHHHHhhccCCCceEEEecCCCCC-----hhhhhhhC---CCcceEEEeeCCCcccHHHHH
Q 020880            1 MSKKRVLVVGGTGY-LGQHLLQGLSEIEGKPYDVAATHHSTPL-----PQLLLDAL---PHSFVFFDVDLKSGSGFDAVA   71 (320)
Q Consensus         1 m~~~~ilItGatG~-IG~~l~~~L~~~g~~v~~v~~~~r~~~~-----~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~   71 (320)
                      |.+|++|||||++- ||.++++.|+++|   .+|++..|+.+.     ...+.+.+   +..+..+.+|++|++++++++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~G---A~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGG---ATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTT---CEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCC---CEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH
Confidence            35789999999999 9999999999999   899999998766     33333332   345677899999999988876


Q ss_pred             H--------HhCCCCEEEECCCc----cCc-----cccccCchhh----hhccccccHHHHHhhhh----hccCc---eE
Q 020880           72 L--------KFGQPDVVVNCAAL----SVP-----RVCENDPDSA----MSINVPSSLVNWLSSFT----ENKEN---LL  123 (320)
Q Consensus        72 ~--------~~~~~d~Vih~a~~----~~~-----~~~~~~~~~~----~~~n~~~~~~~~l~~~~----~~~~~---~~  123 (320)
                      +        .++++|++||+||.    ...     .....++...    +++|+.+++ .++..+.    +.+..   .+
T Consensus      2211 ~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~-~l~~~~~~~m~~~~~g~~~~i 2289 (3089)
T 3zen_D         2211 EWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQ-RLISGLSKIGAERDIASRLHV 2289 (3089)
T ss_dssp             HHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCCCCEEE
T ss_pred             HHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCceeEE
Confidence            5        34569999999997    111     1122233333    677877764 5554443    22221   22


Q ss_pred             EEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHHcCC--------eeEEeecccccCCCCCCCCCCChHHHH
Q 020880          124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSN--------FAILRSSIIYGPQTISPVPKSLPIQWI  195 (320)
Q Consensus       124 v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~--------~~ilR~~~v~G~~~~~~~~~~~~~~~~  195 (320)
                      |..+|. ..+..          .....|+.||...+.+.+.+..+        +..+.||.+-+......  ....    
T Consensus      2290 i~~~ss-~~g~~----------g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~--~~~~---- 2352 (3089)
T 3zen_D         2290 VLPGSP-NRGMF----------GGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQ--NDAI---- 2352 (3089)
T ss_dssp             EEEECS-STTSC----------SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTT--TTTT----
T ss_pred             EEECCc-ccccC----------CCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCccccc--chhH----
Confidence            222221 11110          12347999999999877765433        24577777754321110  0001    


Q ss_pred             HHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhcc---ccccCceeEecCCC---CcCHHHHHHHHHH
Q 020880          196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE---DKQMQLLLNVGGPD---RVSRVQMAEVVAE  262 (320)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~---~~~~~~~~n~~~~~---~~s~~e~~~~i~~  262 (320)
                      ...... ...        .....+|+|.+++.++......   ++  .-...+.+|-   ...+.++...+.+
T Consensus      2353 ~~~~~~-~~~--------r~~~PeEIA~avlfLaS~~a~~~~~~~--p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D         2353 VSAVEE-AGV--------TTYTTDEMAAMLLDLCTVETKVAAAGA--PVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp             HHHHGG-GSC--------BCEEHHHHHHHHHHTTSHHHHHHHHHS--CEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred             HHHHHh-cCC--------CCCCHHHHHHHHHHHhChhhhhHhcCC--eEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence            111111 111        1237899999999988653221   11  1123343543   3688888886643

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.99  E-value=1.1e-09  Score=94.02  Aligned_cols=116  Identities=12%  Similarity=0.031  Sum_probs=77.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh--hhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ--LLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      +|||+||||+||+|+.++..|+++|.. .+|++++++++...  .+.... .... +.+ +.+..++.++++   ++|+|
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~-~ev~l~Di~~~~~~~~dL~~~~-~~~~-v~~-~~~t~d~~~al~---gaDvV   80 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLV-SVLHLYDVVNAPGVTADISHMD-TGAV-VRG-FLGQQQLEAALT---GMDLI   80 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTE-EEEEEEESSSHHHHHHHHHTSC-SSCE-EEE-EESHHHHHHHHT---TCSEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCC-CEEEEEeCCCcHhHHHHhhccc-ccce-EEE-EeCCCCHHHHcC---CCCEE
Confidence            579999999999999999999887732 56777776654111  111111 1111 222 222334555565   99999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      ||+|+....+  .......+..|+.++. ++++++.+.+.+.+|+++|
T Consensus        81 i~~ag~~~~~--g~~r~dl~~~N~~~~~-~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           81 IVPAGVPRKP--GMTRDDLFKINAGIVK-TLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             EECCCCCCCS--SCCCSHHHHHHHHHHH-HHHHHHHHHCTTSEEEECC
T ss_pred             EEcCCcCCCC--CCCHHHHHHHHHHHHH-HHHHHHHhhCCCeEEEEEC
Confidence            9999964322  2244677889999885 9999999988777777776

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.97  E-value=1.1e-10  Score=99.83  Aligned_cols=112  Identities=15%  Similarity=0.066  Sum_probs=74.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC--CCCChhh----hhhh--C-CCcceEEEeeCCCcc-cHHHHHHH
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH--STPLPQL----LLDA--L-PHSFVFFDVDLKSGS-GFDAVALK   73 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r--~~~~~~~----~~~~--~-~~~~~~~~~Dl~d~~-~~~~~~~~   73 (320)
                      |||+||||+||||++++..|+.+|.. .++.++++  ++++.+.    +...  . +..+     ++.+.+ ++.+.++ 
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~-~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~-----~i~~~~d~l~~al~-   73 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFM-KDLVLIGREHSINKLEGLREDIYDALAGTRSDA-----NIYVESDENLRIID-   73 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTC-CEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCC-----EEEEEETTCGGGGT-
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCC-CEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCe-----EEEeCCcchHHHhC-
Confidence            48999999999999999999988743 45776766  3222211    1111  1 1122     222211 2334455 


Q ss_pred             hCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           74 FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                        ++|+|||+||....+  .......+..|+.++. ++++++++.+ +.+|+++|
T Consensus        74 --gaD~Vi~~Ag~~~~~--g~~r~dl~~~N~~i~~-~i~~~i~~~~-~~~vlv~S  122 (313)
T 1hye_A           74 --ESDVVIITSGVPRKE--GMSRMDLAKTNAKIVG-KYAKKIAEIC-DTKIFVIT  122 (313)
T ss_dssp             --TCSEEEECCSCCCCT--TCCHHHHHHHHHHHHH-HHHHHHHHHC-CCEEEECS
T ss_pred             --CCCEEEECCCCCCCC--CCcHHHHHHHHHHHHH-HHHHHHHHhC-CeEEEEec
Confidence              899999999964322  2345677899999985 9999999988 77777776

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.94  E-value=9.1e-10  Score=97.51  Aligned_cols=82  Identities=17%  Similarity=0.176  Sum_probs=65.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC----CcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP----HSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      |++|+|+|| |+||+.+++.|++.|....+|.+.+|+.++...+.+.++    ..+..+.+|++|.+++.++++.. ++|
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-~~D   78 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-KPQ   78 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-CCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-CCC
Confidence            479999998 999999999999987410178889999877766655442    25788899999999999999854 699


Q ss_pred             EEEECCCc
Q 020880           79 VVVNCAAL   86 (320)
Q Consensus        79 ~Vih~a~~   86 (320)
                      +|||+++.
T Consensus        79 vVin~ag~   86 (405)
T 4ina_A           79 IVLNIALP   86 (405)
T ss_dssp             EEEECSCG
T ss_pred             EEEECCCc
Confidence            99999975

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.85  E-value=9.8e-10  Score=93.39  Aligned_cols=111  Identities=15%  Similarity=0.060  Sum_probs=74.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC--CCCChhhhhhh------CCCcceEEEeeCCCcccHHHHHHHhC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH--STPLPQLLLDA------LPHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r--~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      |||+||||+|++|++++..|+.+|.. .++.++++  .+++.+.....      +...+. +..+  +.    +.++   
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~-~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~-v~~~--~~----~a~~---   69 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIA-DEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTR-VRQG--GY----EDTA---   69 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCC-SEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCE-EEEC--CG----GGGT---
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCC-CEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcE-EEeC--CH----HHhC---
Confidence            58999999999999999999988743 46777777  43222111111      112223 2222  22    2244   


Q ss_pred             CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      ++|+|||+|+....+  .......+..|+..+. ++++++.+.+.+.+|+++|
T Consensus        70 ~aDvVi~~ag~~~~~--g~~r~dl~~~N~~i~~-~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           70 GSDVVVITAGIPRQP--GQTRIDLAGDNAPIME-DIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHH-HHHHHHHTTCSCCEEEECC
T ss_pred             CCCEEEEcCCCCCCC--CCCHHHHHHHHHHHHH-HHHHHHHHHCCCcEEEEeC
Confidence            899999999964322  2244577889999984 9999999988777777776

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.83  E-value=4.3e-09  Score=94.24  Aligned_cols=108  Identities=17%  Similarity=0.227  Sum_probs=76.6

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |++|+|+|+| +|++|+++++.|++.|   ++|++..|+.++...+.+.++ .+..+.+|++|.+++.++++   ++|+|
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G---~~V~v~~R~~~~a~~la~~~~-~~~~~~~Dv~d~~~l~~~l~---~~DvV   72 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSG---IKVTVACRTLESAKKLSAGVQ-HSTPISLDVNDDAALDAEVA---KHDLV   72 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTT---CEEEEEESSHHHHHHTTTTCT-TEEEEECCTTCHHHHHHHHT---TSSEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCc---CEEEEEECCHHHHHHHHHhcC-CceEEEeecCCHHHHHHHHc---CCcEE
Confidence            7889999998 8999999999999999   789999998766555544332 35678899999888877776   89999


Q ss_pred             EECCCccCccccccCchhhhh--cccc-------ccHHHHHhhhhhccC
Q 020880           81 VNCAALSVPRVCENDPDSAMS--INVP-------SSLVNWLSSFTENKE  120 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~--~n~~-------~~~~~~l~~~~~~~~  120 (320)
                      |||++......   -....++  .|+.       .+ .+++++|++.|+
T Consensus        73 In~a~~~~~~~---i~~a~l~~g~~vvd~~~~~~~~-~~l~~aA~~aGv  117 (450)
T 1ff9_A           73 ISLIPYTFHAT---VIKSAIRQKKHVVTTSYVSPAM-MELDQAAKDAGI  117 (450)
T ss_dssp             EECCC--CHHH---HHHHHHHHTCEEEESSCCCHHH-HHTHHHHHHTTC
T ss_pred             EECCccccchH---HHHHHHhCCCeEEEeecccHHH-HHHHHHHHHCCC
Confidence            99998642210   0111111  2222       23 488899999987

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.83  E-value=3.8e-09  Score=79.41  Aligned_cols=104  Identities=10%  Similarity=0.033  Sum_probs=71.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |++|+|+|+ |.+|+.+++.|.+.|   ++|++..|+++....+..   .....+.+|.++++.+.++  .+.++|+||+
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g---~~v~~~d~~~~~~~~~~~---~~~~~~~~d~~~~~~l~~~--~~~~~d~vi~   76 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMG---HEVLAVDINEEKVNAYAS---YATHAVIANATEENELLSL--GIRNFEYVIV   76 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTT---CCCEEEESCHHHHHTTTT---TCSEEEECCTTCHHHHHTT--TGGGCSEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHH---hCCEEEEeCCCCHHHHHhc--CCCCCCEEEE
Confidence            568999997 999999999999999   778888887544433222   2345678899887655543  1237999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      +++..            .+.|     ..+...+++.+.+++|..++...+
T Consensus        77 ~~~~~------------~~~~-----~~~~~~~~~~~~~~ii~~~~~~~~  109 (144)
T 2hmt_A           77 AIGAN------------IQAS-----TLTTLLLKELDIPNIWVKAQNYYH  109 (144)
T ss_dssp             CCCSC------------HHHH-----HHHHHHHHHTTCSEEEEECCSHHH
T ss_pred             CCCCc------------hHHH-----HHHHHHHHHcCCCeEEEEeCCHHH
Confidence            97631            0112     145566666777677776665544

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.76  E-value=1.5e-08  Score=88.64  Aligned_cols=93  Identities=15%  Similarity=0.180  Sum_probs=71.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|||+|.|| |++|+.+++.|.+.    ++|...+|+.+..+..    ......+..|+.|.+++.++++   ++|+||+
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~~----~~v~~~~~~~~~~~~~----~~~~~~~~~d~~d~~~l~~~~~---~~DvVi~   83 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKDE----FDVYIGDVNNENLEKV----KEFATPLKVDASNFDKLVEVMK---EFELVIG   83 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTTT----SEEEEEESCHHHHHHH----TTTSEEEECCTTCHHHHHHHHT---TCSEEEE
T ss_pred             ccEEEEECC-CHHHHHHHHHHhcC----CCeEEEEcCHHHHHHH----hccCCcEEEecCCHHHHHHHHh---CCCEEEE
Confidence            578999998 99999999988654    6888888876555443    2345668899999999888887   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEee
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS  127 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~S  127 (320)
                      +++....                   ..++++|.+.|+ ++|=+|
T Consensus        84 ~~p~~~~-------------------~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           84 ALPGFLG-------------------FKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             CCCGGGH-------------------HHHHHHHHHHTC-EEEECC
T ss_pred             ecCCccc-------------------chHHHHHHhcCc-ceEeee
Confidence            9864310                   267888888887 666655

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.74  E-value=1.7e-08  Score=75.70  Aligned_cols=74  Identities=20%  Similarity=0.213  Sum_probs=59.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |++|+|+|+ |.+|+++++.|.++|   ++|++..++++....+.+   ..+.++.+|.++++.+.++-  ..++|+||.
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g---~~V~~id~~~~~~~~~~~---~~~~~~~gd~~~~~~l~~~~--~~~~d~vi~   76 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAG---KKVLAVDKSKEKIELLED---EGFDAVIADPTDESFYRSLD--LEGVSAVLI   76 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTT---CCEEEEESCHHHHHHHHH---TTCEEEECCTTCHHHHHHSC--CTTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEECCHHHHHHHHH---CCCcEEECCCCCHHHHHhCC--cccCCEEEE
Confidence            578999997 999999999999999   889999998766555443   24677899999988776541  237999998


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +.+
T Consensus        77 ~~~   79 (141)
T 3llv_A           77 TGS   79 (141)
T ss_dssp             CCS
T ss_pred             ecC
Confidence            765

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.70  E-value=2.9e-08  Score=74.13  Aligned_cols=76  Identities=13%  Similarity=0.184  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+|+|+|+ |++|+.+++.|.+.|   ++|++..|+++....+....  ++.++.+|..+++.+.+.  .+.++|+||
T Consensus         3 ~~m~i~IiG~-G~iG~~~a~~L~~~g---~~v~~~d~~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~--~~~~~d~vi   74 (140)
T 1lss_A            3 HGMYIIIAGI-GRVGYTLAKSLSEKG---HDIVLIDIDKDICKKASAEI--DALVINGDCTKIKTLEDA--GIEDADMYI   74 (140)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHC--SSEEEESCTTSHHHHHHT--TTTTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCHHHHHHHHHhc--CcEEEEcCCCCHHHHHHc--CcccCCEEE
Confidence            3578999996 999999999999999   88999988766555444332  355678898887655432  123899999


Q ss_pred             ECCC
Q 020880           82 NCAA   85 (320)
Q Consensus        82 h~a~   85 (320)
                      ++..
T Consensus        75 ~~~~   78 (140)
T 1lss_A           75 AVTG   78 (140)
T ss_dssp             ECCS
T ss_pred             EeeC
Confidence            9964

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.67  E-value=4.2e-08  Score=88.07  Aligned_cols=110  Identities=17%  Similarity=0.226  Sum_probs=75.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      ++++|+|+|| |++|+.++..|++. |   ++|++..|+.++...+.+.  .++..+.+|+.|.+++.++++   ++|+|
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g---~~V~v~~R~~~ka~~la~~--~~~~~~~~D~~d~~~l~~~l~---~~DvV   92 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDD---INVTVACRTLANAQALAKP--SGSKAISLDVTDDSALDKVLA---DNDVV   92 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTT---EEEEEEESSHHHHHHHHGG--GTCEEEECCTTCHHHHHHHHH---TSSEE
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCC---CeEEEEECCHHHHHHHHHh--cCCcEEEEecCCHHHHHHHHc---CCCEE
Confidence            4689999997 99999999999998 6   7899999987766665543  245667889999888887777   89999


Q ss_pred             EECCCccCccc-c---ccCchhhhhcccccc-HHHHHhhhhhccC
Q 020880           81 VNCAALSVPRV-C---ENDPDSAMSINVPSS-LVNWLSSFTENKE  120 (320)
Q Consensus        81 ih~a~~~~~~~-~---~~~~~~~~~~n~~~~-~~~~l~~~~~~~~  120 (320)
                      ||+++...... .   .......+..+.... ...+++.+++.|+
T Consensus        93 In~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv  137 (467)
T 2axq_A           93 ISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGI  137 (467)
T ss_dssp             EECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTC
T ss_pred             EECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCC
Confidence            99998642110 0   000011122222111 1377888888886

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.64  E-value=3.7e-08  Score=74.98  Aligned_cols=78  Identities=13%  Similarity=0.069  Sum_probs=60.7

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-CChhhhhhhCCCcceEEEeeCCCcccHHHH-HHHhCCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLDALPHSFVFFDVDLKSGSGFDAV-ALKFGQPD   78 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~~d   78 (320)
                      |..++|+|+|+ |.+|+++++.|.+.|   ++|+++.+++ +..+.+....+.++.++.+|.+|++.+.++ ++   ++|
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g---~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~---~ad   73 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRG---QNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGID---RCR   73 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTT---CCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTT---TCS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCC---CCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChh---hCC
Confidence            77889999995 999999999999999   8899898874 333333333344678899999998877665 33   899


Q ss_pred             EEEECCC
Q 020880           79 VVVNCAA   85 (320)
Q Consensus        79 ~Vih~a~   85 (320)
                      .||-+.+
T Consensus        74 ~vi~~~~   80 (153)
T 1id1_A           74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEecC
Confidence            9998764

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.52  E-value=2.6e-07  Score=74.09  Aligned_cols=77  Identities=19%  Similarity=0.367  Sum_probs=56.8

Q ss_pred             CCCcEEEEEcC----------------CChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCc
Q 020880            1 MSKKRVLVVGG----------------TGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG   64 (320)
Q Consensus         1 m~~~~ilItGa----------------tG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~   64 (320)
                      |.+|+||||||                ||.||.++++.|.++|   ++|+++.++....      .+..+  -..|+.+.
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~G---a~V~l~~~~~~l~------~~~g~--~~~dv~~~   74 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG---ANVTLVSGPVSLP------TPPFV--KRVDVMTA   74 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT---CEEEEEECSCCCC------CCTTE--EEEECCSH
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCC---CEEEEEECCcccc------cCCCC--eEEccCcH
Confidence            45789999999                7999999999999999   8888877764211      11222  35678776


Q ss_pred             ccHH-HHHHHhCCCCEEEECCCccC
Q 020880           65 SGFD-AVALKFGQPDVVVNCAALSV   88 (320)
Q Consensus        65 ~~~~-~~~~~~~~~d~Vih~a~~~~   88 (320)
                      +++. .+.+.++++|++||+||...
T Consensus        75 ~~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           75 LEMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHHHHHhcCCCCEEEECCcccC
Confidence            6543 33445668999999999764

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.51  E-value=2.2e-07  Score=74.66  Aligned_cols=79  Identities=18%  Similarity=0.234  Sum_probs=55.0

Q ss_pred             CCcEEEEEcC----------------CChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcc
Q 020880            2 SKKRVLVVGG----------------TGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS   65 (320)
Q Consensus         2 ~~~~ilItGa----------------tG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~   65 (320)
                      .+|+||||||                ||.+|.++++.|+++|   ++|+++.|+.+....    .+..+.  ..|+...+
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~G---a~V~lv~~~~~~~~~----~~~~~~--~~~v~s~~   72 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAG---YEVCLITTKRALKPE----PHPNLS--IREITNTK   72 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTT---CEEEEEECTTSCCCC----CCTTEE--EEECCSHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCC---CEEEEEeCCcccccc----CCCCeE--EEEHhHHH
Confidence            3689999999                9999999999999999   899999887532110    012332  33554544


Q ss_pred             cH-HHHHHHhCCCCEEEECCCccCc
Q 020880           66 GF-DAVALKFGQPDVVVNCAALSVP   89 (320)
Q Consensus        66 ~~-~~~~~~~~~~d~Vih~a~~~~~   89 (320)
                      .+ ..+.+.++++|++||+||....
T Consensus        73 em~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           73 DLLIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             HHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred             HHHHHHHHhcCCCCEEEEcCccccc
Confidence            33 3333445689999999997643

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=98.48  E-value=2.3e-07  Score=80.00  Aligned_cols=99  Identities=22%  Similarity=0.211  Sum_probs=63.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhcc-----CCCceEEEecCCCCChhhhhhhCCC-----cceEEEeeCCCcccHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIE-----GKPYDVAATHHSTPLPQLLLDALPH-----SFVFFDVDLKSGSGFDAV   70 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g-----~~v~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dl~d~~~~~~~   70 (320)
                      |+|+||+|.||||++|+.|++.|++++     +  ++++.+.++.+..+.+....+.     .+.+  .|+ ++    +.
T Consensus         7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~--~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~--~~~-~~----~~   77 (352)
T 2nqt_A            7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGR--LRIGALTAATSAGSTLGEHHPHLTPLAHRVV--EPT-EA----AV   77 (352)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTS--EEEEEEEESSCTTSBGGGTCTTCGGGTTCBC--EEC-CH----HH
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCcc--EEEEEEECCCcCCCchhhhcccccccceeee--ccC-CH----HH
Confidence            567899999999999999999999877     4  6777776443322222111110     1111  122 21    22


Q ss_pred             HHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        71 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      +.   ++|+||.|.+...                  + ..+++.+ +.|+ ++|-.|+..-.
T Consensus        78 ~~---~~DvVf~alg~~~------------------s-~~~~~~~-~~G~-~vIDlSa~~R~  115 (352)
T 2nqt_A           78 LG---GHDAVFLALPHGH------------------S-AVLAQQL-SPET-LIIDCGADFRL  115 (352)
T ss_dssp             HT---TCSEEEECCTTSC------------------C-HHHHHHS-CTTS-EEEECSSTTTC
T ss_pred             hc---CCCEEEECCCCcc------------------h-HHHHHHH-hCCC-EEEEECCCccC
Confidence            33   8999999886531                  1 3677777 7786 89999987643

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.40  E-value=9.1e-08  Score=81.98  Aligned_cols=119  Identities=14%  Similarity=0.110  Sum_probs=75.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCC----CceEEEecCCCC--ChhhhhhhCCC-cceEEEeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGK----PYDVAATHHSTP--LPQLLLDALPH-SFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~----v~~v~~~~r~~~--~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      .+||+||||+|+||++++..|+..|.-    ...+.++++.+.  +.+.....+.. ...+. .++.......+.++   
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~~---   78 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATDKEEIAFK---   78 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEESCHHHHTT---
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcCCcHHHhC---
Confidence            368999999999999999999887631    122888877542  22111111100 00111 12222222333444   


Q ss_pred             CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc--eEEEeec
Q 020880           76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN--LLIHLST  128 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~--~~v~~Ss  128 (320)
                      ++|+|||+||....  ...+....++.|+... .++++++.+.+.+  +++.+|.
T Consensus        79 daDvVvitAg~prk--pG~tR~dll~~N~~i~-~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           79 DLDVAILVGSMPRR--DGMERKDLLKANVKIF-KCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             TCSEEEECCSCCCC--TTCCTTTTHHHHHHHH-HHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCCEEEEeCCCCCC--CCCCHHHHHHHHHHHH-HHHHHHHHHhCCCCeEEEEcCC
Confidence            99999999986422  2345677888999887 4999999988764  5777776

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.38  E-value=1.1e-06  Score=66.78  Aligned_cols=75  Identities=16%  Similarity=0.088  Sum_probs=55.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++|+|+|+ |.+|+.+++.|.+.|   ++|++..|+++....+...  .+...+.+|..+++.+.+.  ...++|+||.
T Consensus        19 ~~~v~IiG~-G~iG~~la~~L~~~g---~~V~vid~~~~~~~~~~~~--~g~~~~~~d~~~~~~l~~~--~~~~ad~Vi~   90 (155)
T 2g1u_A           19 SKYIVIFGC-GRLGSLIANLASSSG---HSVVVVDKNEYAFHRLNSE--FSGFTVVGDAAEFETLKEC--GMEKADMVFA   90 (155)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCGGGGGGSCTT--CCSEEEESCTTSHHHHHTT--TGGGCSEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCHHHHHHHHhc--CCCcEEEecCCCHHHHHHc--CcccCCEEEE
Confidence            579999995 999999999999999   8899999987665443311  2355677888876655433  1237999998


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +.+
T Consensus        91 ~~~   93 (155)
T 2g1u_A           91 FTN   93 (155)
T ss_dssp             CSS
T ss_pred             EeC
Confidence            865

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.38  E-value=1.1e-06  Score=74.85  Aligned_cols=114  Identities=17%  Similarity=0.119  Sum_probs=73.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCC---cccHHHHHHHhCCCCEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS---GSGFDAVALKFGQPDVV   80 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~~~~~~~~~~~~d~V   80 (320)
                      |||.|+||+|++|+.++..|+.+|.. .+|.+.++++  .......+.....  ..++..   ..+++++++   ++|+|
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~-~ev~L~Di~~--~~~~a~dL~~~~~--~~~l~~~~~t~d~~~a~~---~aDvV   72 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLV-SRLTLYDIAH--TPGVAADLSHIET--RATVKGYLGPEQLPDCLK---GCDVV   72 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTC-SEEEEEESSS--HHHHHHHHTTSSS--SCEEEEEESGGGHHHHHT---TCSEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCC-cEEEEEeCCc--cHHHHHHHhccCc--CceEEEecCCCCHHHHhC---CCCEE
Confidence            58999999999999999999988742 5788888876  2221111111110  112211   123555565   99999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      |++||....+  .......+..|+.... .+++.+.+.... ++|++|.
T Consensus        73 vi~ag~~~~~--g~~r~dl~~~n~~i~~-~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           73 VIPAGVPRKP--GMTRDDLFNTNATIVA-TLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             EECCSCCCCT--TCCGGGGHHHHHHHHH-HHHHHHHHHCTTSEEEECSS
T ss_pred             EECCCcCCCC--CCcHHHHHHHHHHHHH-HHHHHHHhhCCCeEEEEECC
Confidence            9999875322  2334566778877763 788887776543 7787765

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.35  E-value=6.6e-07  Score=71.03  Aligned_cols=101  Identities=23%  Similarity=0.153  Sum_probs=70.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +++|+|+||+|-||..+++.+...|   .+|++..|++++.+... .++  .. ...|..+.+..+.+.+..  .++|+|
T Consensus        39 g~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~~~~~~~~~-~~g--~~-~~~d~~~~~~~~~~~~~~~~~~~D~v  111 (198)
T 1pqw_A           39 GERVLIHSATGGVGMAAVSIAKMIG---ARIYTTAGSDAKREMLS-RLG--VE-YVGDSRSVDFADEILELTDGYGVDVV  111 (198)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHT---CEEEEEESSHHHHHHHH-TTC--CS-EEEETTCSTHHHHHHHHTTTCCEEEE
T ss_pred             CCEEEEeeCCChHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHH-HcC--CC-EEeeCCcHHHHHHHHHHhCCCCCeEE
Confidence            5799999999999999999999999   88999988765443332 222  22 235887766555544433  258999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhh
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV  131 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~v  131 (320)
                      |+++|.   .        .        +...++.++..|  ++|.+++...
T Consensus       112 i~~~g~---~--------~--------~~~~~~~l~~~G--~~v~~g~~~~  141 (198)
T 1pqw_A          112 LNSLAG---E--------A--------IQRGVQILAPGG--RFIELGKKDV  141 (198)
T ss_dssp             EECCCT---H--------H--------HHHHHHTEEEEE--EEEECSCGGG
T ss_pred             EECCch---H--------H--------HHHHHHHhccCC--EEEEEcCCCC
Confidence            999862   1        0        135666666666  8999887653

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.29  E-value=1.8e-06  Score=74.41  Aligned_cols=82  Identities=17%  Similarity=-0.040  Sum_probs=63.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHh-hccCCCceEEEecCCCCChh---------------hhhhhCCCcceEEEeeCCCccc
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLS-EIEGKPYDVAATHHSTPLPQ---------------LLLDALPHSFVFFDVDLKSGSG   66 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~-~~g~~v~~v~~~~r~~~~~~---------------~~~~~~~~~~~~~~~Dl~d~~~   66 (320)
                      .|++|||||+.-||.+.+..|. ..|   ..|+++.+..+...               +..+..+.....+.+|++|++.
T Consensus        50 pK~vLVtGaSsGiGlA~AialAf~~G---A~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           50 PKNVLVLGCSNGYGLASRITAAFGYG---AATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHhhCC---CCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            5899999999999999999887 567   67888777654322               1223335567789999999999


Q ss_pred             HHHHHHH----hCCCCEEEECCCcc
Q 020880           67 FDAVALK----FGQPDVVVNCAALS   87 (320)
Q Consensus        67 ~~~~~~~----~~~~d~Vih~a~~~   87 (320)
                      +.++++.    ++++|++||.+|..
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccc
Confidence            8777754    47899999999865

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.26  E-value=6.8e-07  Score=70.02  Aligned_cols=75  Identities=15%  Similarity=0.141  Sum_probs=56.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      +++|+|.| .|.+|+.+++.|.+. |   ++|++..+++++...+.+   .++..+.+|.++++.+.++ ..+.++|.||
T Consensus        39 ~~~v~IiG-~G~~G~~~a~~L~~~~g---~~V~vid~~~~~~~~~~~---~g~~~~~gd~~~~~~l~~~-~~~~~ad~vi  110 (183)
T 3c85_A           39 HAQVLILG-MGRIGTGAYDELRARYG---KISLGIEIREEAAQQHRS---EGRNVISGDATDPDFWERI-LDTGHVKLVL  110 (183)
T ss_dssp             TCSEEEEC-CSHHHHHHHHHHHHHHC---SCEEEEESCHHHHHHHHH---TTCCEEECCTTCHHHHHTB-CSCCCCCEEE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhccC---CeEEEEECCHHHHHHHHH---CCCCEEEcCCCCHHHHHhc-cCCCCCCEEE
Confidence            46899999 699999999999999 9   889999998766555433   2456688899887755443 0123899999


Q ss_pred             ECCC
Q 020880           82 NCAA   85 (320)
Q Consensus        82 h~a~   85 (320)
                      .+.+
T Consensus       111 ~~~~  114 (183)
T 3c85_A          111 LAMP  114 (183)
T ss_dssp             ECCS
T ss_pred             EeCC
Confidence            8754

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.19  E-value=5.2e-07  Score=77.44  Aligned_cols=120  Identities=10%  Similarity=0.118  Sum_probs=72.5

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |+++||.|+|++|+||+.++..|+..|.. .+|.+.+..+++.+.....+... .+-..++.-..+..+.++   ++|+|
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~-~evvLiDi~~~k~~g~a~DL~~~-~~~~~~i~~t~d~~~al~---dADvV   80 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLT-PNLCLYDPFAVGLEGVAEEIRHC-GFEGLNLTFTSDIKEALT---DAKYI   80 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCC-SCEEEECSCHHHHHHHHHHHHHH-CCTTCCCEEESCHHHHHT---TEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCC-CEEEEEeCCchhHHHHHHhhhhC-cCCCCceEEcCCHHHHhC---CCCEE
Confidence            56789999999999999999999988843 47888888765443311111000 000011111123444555   89999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCce--EEEeec
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL--LIHLST  128 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~--~v~~Ss  128 (320)
                      |.+||....  ........+..|+... ..+.+.+.+...+-  ++.+|.
T Consensus        81 vitaG~p~k--pG~~R~dLl~~N~~I~-~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           81 VSSGGAPRK--EGMTREDLLKGNAEIA-AQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             EECCC---------CHHHHHHHHHHHH-HHHHHHHHHHCTTCCEEEECSS
T ss_pred             EEccCCCCC--CCCCHHHHHHHHHHHH-HHHHHHHHHhccCcEEEEEecC
Confidence            999986422  2234566778887665 37888887765433  566665

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.16  E-value=7.3e-07  Score=74.22  Aligned_cols=35  Identities=23%  Similarity=0.377  Sum_probs=28.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhh-ccCCCceEEEecCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSE-IEGKPYDVAATHHS   39 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~-~g~~v~~v~~~~r~   39 (320)
                      .+|||.|+|++|.+|+.+++.+.+ .+   +++++..+.
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~---~elva~~d~   39 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEG---VQLGAALER   39 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTT---EECCCEECC
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCC---CEEEEEEec
Confidence            357999999999999999999875 45   777755444

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=98.13  E-value=2.9e-06  Score=73.53  Aligned_cols=101  Identities=19%  Similarity=0.220  Sum_probs=61.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcce-EEEeeCCCcccHHHHHHHhCCCCE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFV-FFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |+++||.|.||||+||+.+++.|.+..+  ++++.+.+..+...+....++ .+. .+..|+.-.+  .+.++   ++|+
T Consensus        14 M~~~kV~IiGAtG~iG~~llr~L~~~p~--~elvai~~~~~~g~~~~~~~~-~~~~~v~~dl~~~~--~~~~~---~vDv   85 (359)
T 1xyg_A           14 EKDIRIGLLGASGYTGAEIVRLLANHPH--FQVTLMTADRKAGQSMESVFP-HLRAQKLPTLVSVK--DADFS---TVDA   85 (359)
T ss_dssp             -CCEEEEEECCSSHHHHHHHHHHHTCSS--EEEEEEBCSTTTTSCHHHHCG-GGTTSCCCCCBCGG--GCCGG---GCSE
T ss_pred             ccCcEEEEECcCCHHHHHHHHHHHcCCC--cEEEEEeCchhcCCCHHHhCc-hhcCcccccceecc--hhHhc---CCCE
Confidence            3457999999999999999999988753  688887765443332222211 000 0012332211  22233   7999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      ||.|++....                   ...+..+ +.|+ ++|-.|+..
T Consensus        86 Vf~atp~~~s-------------------~~~a~~~-~aG~-~VId~sa~~  115 (359)
T 1xyg_A           86 VFCCLPHGTT-------------------QEIIKEL-PTAL-KIVDLSADF  115 (359)
T ss_dssp             EEECCCTTTH-------------------HHHHHTS-CTTC-EEEECSSTT
T ss_pred             EEEcCCchhH-------------------HHHHHHH-hCCC-EEEECCccc
Confidence            9999864311                   2666677 7777 788888864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.12  E-value=3.9e-06  Score=72.27  Aligned_cols=100  Identities=15%  Similarity=0.041  Sum_probs=70.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +++||||||+|-||..+++.+...|   .+|++.+|++++.+.. ..++.  . ...|..+.+++.+.+...  +++|+|
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~~~~~~~~-~~~g~--~-~~~d~~~~~~~~~~~~~~~~~~~d~v  218 (333)
T 1v3u_A          146 GETVLVSAAAGAVGSVVGQIAKLKG---CKVVGAAGSDEKIAYL-KQIGF--D-AAFNYKTVNSLEEALKKASPDGYDCY  218 (333)
T ss_dssp             SCEEEEESTTBHHHHHHHHHHHHTT---CEEEEEESSHHHHHHH-HHTTC--S-EEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHHHHH-HhcCC--c-EEEecCCHHHHHHHHHHHhCCCCeEE
Confidence            5799999999999999999999999   8999999876555444 33332  2 346888745555555432  368999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      |+++|..           .        +...++.++..|  +++.++...
T Consensus       219 i~~~g~~-----------~--------~~~~~~~l~~~G--~~v~~g~~~  247 (333)
T 1v3u_A          219 FDNVGGE-----------F--------LNTVLSQMKDFG--KIAICGAIS  247 (333)
T ss_dssp             EESSCHH-----------H--------HHHHHTTEEEEE--EEEECCCCC
T ss_pred             EECCChH-----------H--------HHHHHHHHhcCC--EEEEEeccc
Confidence            9999731           0        125556666655  888887654

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=98.11  E-value=3.8e-06  Score=72.23  Aligned_cols=97  Identities=20%  Similarity=0.082  Sum_probs=59.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|||+|.||||+||+.+++.|+++++.+++++.+....+..... . +.. ......|+ +++.    +.   ++|+||-
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~-~-~~g-~~i~~~~~-~~~~----~~---~~DvV~~   74 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRM-G-FAE-SSLRVGDV-DSFD----FS---SVGLAFF   74 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEE-E-ETT-EEEECEEG-GGCC----GG---GCSEEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCcc-c-cCC-cceEEecC-CHHH----hc---CCCEEEE
Confidence            47899999999999999999998776556766554321111100 0 111 11111222 2222    23   7999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      |.+...                  + ..++..+.+.|+ ++|-+|+..
T Consensus        75 a~g~~~------------------s-~~~a~~~~~aG~-kvId~Sa~~  102 (340)
T 2hjs_A           75 AAAAEV------------------S-RAHAERARAAGC-SVIDLSGAL  102 (340)
T ss_dssp             CSCHHH------------------H-HHHHHHHHHTTC-EEEETTCTT
T ss_pred             cCCcHH------------------H-HHHHHHHHHCCC-EEEEeCCCC
Confidence            876320                  1 266777777888 578888765

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=98.11  E-value=2.7e-06  Score=73.29  Aligned_cols=100  Identities=18%  Similarity=0.213  Sum_probs=60.7

Q ss_pred             CC-CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceE-EEeeCCCcccHHHHHHHhCCCC
Q 020880            1 MS-KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVF-FDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         1 m~-~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      |+ |+||.|.||||+||+.+++.|.+..+  ++++.+.+..+...+.....+ .+.- ....+.+.   .+ +   .++|
T Consensus         1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~--~elv~v~s~~~~g~~~~~~~~-~~~g~~~~~~~~~---~~-~---~~vD   70 (345)
T 2ozp_A            1 MTGKKTLSIVGASGYAGGEFLRLALSHPY--LEVKQVTSRRFAGEPVHFVHP-NLRGRTNLKFVPP---EK-L---EPAD   70 (345)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHTCTT--EEEEEEBCSTTTTSBGGGTCG-GGTTTCCCBCBCG---GG-C---CCCS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHcCCC--cEEEEEECchhhCchhHHhCc-hhcCcccccccch---hH-h---cCCC
Confidence            54 68999999999999999999987653  688877765443322222111 0000 01112222   12 2   3899


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      +||.|++...                  . ..++..+.+.|+ ++|-.|+..
T Consensus        71 vV~~a~g~~~------------------s-~~~a~~~~~aG~-~VId~Sa~~  102 (345)
T 2ozp_A           71 ILVLALPHGV------------------F-AREFDRYSALAP-VLVDLSADF  102 (345)
T ss_dssp             EEEECCCTTH------------------H-HHTHHHHHTTCS-EEEECSSTT
T ss_pred             EEEEcCCcHH------------------H-HHHHHHHHHCCC-EEEEcCccc
Confidence            9999976431                  0 256666667787 688888864

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.09  E-value=2.7e-06  Score=68.61  Aligned_cols=74  Identities=18%  Similarity=0.209  Sum_probs=58.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|+|+|+ |.+|+++++.|.++|   ++|++..++++..+.+.+..  +..++.+|.++++.+.++-  +.++|+||-+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g---~~v~vid~~~~~~~~l~~~~--~~~~i~gd~~~~~~l~~a~--i~~ad~vi~~   72 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRK---YGVVIINKDRELCEEFAKKL--KATIIHGDGSHKEILRDAE--VSKNDVVVIL   72 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTT---CCEEEEESCHHHHHHHHHHS--SSEEEESCTTSHHHHHHHT--CCTTCEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCHHHHHHHHHHc--CCeEEEcCCCCHHHHHhcC--cccCCEEEEe
Confidence            57999995 999999999999999   78999999877666554432  4667999999988776542  2489999976


Q ss_pred             CC
Q 020880           84 AA   85 (320)
Q Consensus        84 a~   85 (320)
                      .+
T Consensus        73 ~~   74 (218)
T 3l4b_C           73 TP   74 (218)
T ss_dssp             CS
T ss_pred             cC
Confidence            53

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.08  E-value=8.9e-06  Score=71.00  Aligned_cols=103  Identities=15%  Similarity=0.226  Sum_probs=69.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++|+|+|+ |-||+.+++.|...|   .+|++.+|++++.+...+.++..   +..|..+.+++.+.+.   ++|+||+
T Consensus       166 ~~~V~ViGa-G~iG~~~a~~l~~~G---a~V~~~d~~~~~~~~~~~~~g~~---~~~~~~~~~~l~~~~~---~~DvVi~  235 (369)
T 2eez_A          166 PASVVILGG-GTVGTNAAKIALGMG---AQVTILDVNHKRLQYLDDVFGGR---VITLTATEANIKKSVQ---HADLLIG  235 (369)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTTTS---EEEEECCHHHHHHHHH---HCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHHhcCce---EEEecCCHHHHHHHHh---CCCEEEE
Confidence            579999998 999999999999999   89999999876555444333322   5667777777877776   7899999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      +++.....    .+      .+. + ...++.++..+  .+|.+|+.
T Consensus       236 ~~g~~~~~----~~------~li-~-~~~l~~mk~gg--~iV~v~~~  268 (369)
T 2eez_A          236 AVLVPGAK----AP------KLV-T-RDMLSLMKEGA--VIVDVAVD  268 (369)
T ss_dssp             CCC-----------------CCS-C-HHHHTTSCTTC--EEEECC--
T ss_pred             CCCCCccc----cc------hhH-H-HHHHHhhcCCC--EEEEEecC
Confidence            98753210    01      110 1 25566665433  78888864

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.05  E-value=7.4e-06  Score=70.36  Aligned_cols=99  Identities=11%  Similarity=0.071  Sum_probs=69.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +++|||+||+|-||..+++.+...|   .+|+++.|++++.+...+ ++.  . ...|..+.+..+.+.+..  .++|+|
T Consensus       141 g~~vlV~Ga~ggiG~~~~~~a~~~G---~~V~~~~~~~~~~~~~~~-~g~--~-~~~~~~~~~~~~~~~~~~~~~~~D~v  213 (327)
T 1qor_A          141 DEQFLFHAAAGGVGLIACQWAKALG---AKLIGTVGTAQKAQSALK-AGA--W-QVINYREEDLVERLKEITGGKKVRVV  213 (327)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHT---CEEEEEESSHHHHHHHHH-HTC--S-EEEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHH-cCC--C-EEEECCCccHHHHHHHHhCCCCceEE
Confidence            5799999999999999999999999   889999988655444333 222  2 345777766555554433  268999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      |+++|.   ..                +...++.++..|  ++|.+++.
T Consensus       214 i~~~g~---~~----------------~~~~~~~l~~~G--~iv~~g~~  241 (327)
T 1qor_A          214 YDSVGR---DT----------------WERSLDCLQRRG--LMVSFGNS  241 (327)
T ss_dssp             EECSCG---GG----------------HHHHHHTEEEEE--EEEECCCT
T ss_pred             EECCch---HH----------------HHHHHHHhcCCC--EEEEEecC
Confidence            999972   10                135666666666  88888764

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.04  E-value=9.1e-06  Score=70.40  Aligned_cols=100  Identities=16%  Similarity=0.170  Sum_probs=69.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +++|||+||+|-||..+++.+...|   .+|+++.|++++.+.. ..++.  . ...|+.+.+++.+.+...  +++|+|
T Consensus       170 g~~vlV~Ga~ggiG~~~~~~a~~~G---a~V~~~~~~~~~~~~~-~~~g~--~-~~~d~~~~~~~~~~~~~~~~~~~D~v  242 (347)
T 2hcy_A          170 GHWVAISGAAGGLGSLAVQYAKAMG---YRVLGIDGGEGKEELF-RSIGG--E-VFIDFTKEKDIVGAVLKATDGGAHGV  242 (347)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECSTTHHHHH-HHTTC--C-EEEETTTCSCHHHHHHHHHTSCEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CcEEEEcCCHHHHHHH-HHcCC--c-eEEecCccHhHHHHHHHHhCCCCCEE
Confidence            5789999999999999999999999   8999999887665433 33332  2 345887656665555432  268999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      |+++|..         .         ++...++.++..|  ++|.+++.
T Consensus       243 i~~~g~~---------~---------~~~~~~~~l~~~G--~iv~~g~~  271 (347)
T 2hcy_A          243 INVSVSE---------A---------AIEASTRYVRANG--TTVLVGMP  271 (347)
T ss_dssp             EECSSCH---------H---------HHHHHTTSEEEEE--EEEECCCC
T ss_pred             EECCCcH---------H---------HHHHHHHHHhcCC--EEEEEeCC
Confidence            9998731         0         0125555565555  88888764

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.03  E-value=1.7e-06  Score=69.42  Aligned_cols=73  Identities=21%  Similarity=0.243  Sum_probs=50.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|+|+||+|.+|+++++.|++.|   ++|++..|++++.+.+.+..+..+.  ..|+. .+++.++++   ++|+||++
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~---~~D~Vi~~   71 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSRREEKAEAKAAEYRRIAG--DASIT-GMKNEDAAE---ACDIAVLT   71 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSHHHHHHHHHHHHHHHS--SCCEE-EEEHHHHHH---HCSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhccccc--cCCCC-hhhHHHHHh---cCCEEEEe
Confidence            479999999999999999999999   8899999986655444332110000  01222 234556666   78999998


Q ss_pred             CC
Q 020880           84 AA   85 (320)
Q Consensus        84 a~   85 (320)
                      ..
T Consensus        72 ~~   73 (212)
T 1jay_A           72 IP   73 (212)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.01  E-value=1.1e-05  Score=69.37  Aligned_cols=99  Identities=13%  Similarity=0.088  Sum_probs=69.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +++|+|+||+|-||..+++.+...|   .+|++++|++++.+...+ ++.  . ...|..+.+..+.+.+..  .++|+|
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~a~~~G---~~Vi~~~~~~~~~~~~~~-~g~--~-~~~d~~~~~~~~~i~~~~~~~~~d~v  218 (333)
T 1wly_A          146 GDYVLIHAAAGGMGHIMVPWARHLG---ATVIGTVSTEEKAETARK-LGC--H-HTINYSTQDFAEVVREITGGKGVDVV  218 (333)
T ss_dssp             TCEEEETTTTSTTHHHHHHHHHHTT---CEEEEEESSHHHHHHHHH-HTC--S-EEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHH-cCC--C-EEEECCCHHHHHHHHHHhCCCCCeEE
Confidence            5789999999999999999999999   899999998655444332 222  2 345777765544444332  268999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      |+++|..  .                 +...++.++..|  ++|.+++.
T Consensus       219 i~~~g~~--~-----------------~~~~~~~l~~~G--~iv~~g~~  246 (333)
T 1wly_A          219 YDSIGKD--T-----------------LQKSLDCLRPRG--MCAAYGHA  246 (333)
T ss_dssp             EECSCTT--T-----------------HHHHHHTEEEEE--EEEECCCT
T ss_pred             EECCcHH--H-----------------HHHHHHhhccCC--EEEEEecC
Confidence            9999741  0                 135566666666  78888754

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.00  E-value=7.5e-06  Score=61.01  Aligned_cols=74  Identities=12%  Similarity=0.049  Sum_probs=58.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +++|+|.|+ |.+|+.+++.|.+.|   ++|++..++++..+.+.+   .++.++.+|.++++.+.++-  ..++|.||-
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g---~~v~vid~~~~~~~~~~~---~g~~~i~gd~~~~~~l~~a~--i~~ad~vi~   77 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASD---IPLVVIETSRTRVDELRE---RGVRAVLGNAANEEIMQLAH--LECAKWLIL   77 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTT---CCEEEEESCHHHHHHHHH---TTCEEEESCTTSHHHHHHTT--GGGCSEEEE
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHH---cCCCEEECCCCCHHHHHhcC--cccCCEEEE
Confidence            468999995 999999999999999   899999999776655544   35677899999988766541  137899997


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +.+
T Consensus        78 ~~~   80 (140)
T 3fwz_A           78 TIP   80 (140)
T ss_dssp             CCS
T ss_pred             ECC
Confidence            754

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.97  E-value=1.1e-05  Score=70.07  Aligned_cols=100  Identities=17%  Similarity=0.060  Sum_probs=69.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhC-CCCEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFG-QPDVVV   81 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~~d~Vi   81 (320)
                      ++|||+||+|-||..+++.+...|   . +|+++++++++.+...+.++.  . ...|..+.+..+.+.+... ++|+||
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~G---a~~Vi~~~~~~~~~~~~~~~~g~--~-~~~d~~~~~~~~~~~~~~~~~~d~vi  235 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLG---CSRVVGICGTHEKCILLTSELGF--D-AAINYKKDNVAEQLRESCPAGVDVYF  235 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTT---CSEEEEEESCHHHHHHHHHTSCC--S-EEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCC---CCeEEEEeCCHHHHHHHHHHcCC--c-eEEecCchHHHHHHHHhcCCCCCEEE
Confidence            799999999999999999999999   7 899999886555444433432  2 3467777544333333222 589999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      +++|..           .        +...++.++..|  ++|.++...
T Consensus       236 ~~~G~~-----------~--------~~~~~~~l~~~G--~iv~~G~~~  263 (357)
T 2zb4_A          236 DNVGGN-----------I--------SDTVISQMNENS--HIILCGQIS  263 (357)
T ss_dssp             ESCCHH-----------H--------HHHHHHTEEEEE--EEEECCCGG
T ss_pred             ECCCHH-----------H--------HHHHHHHhccCc--EEEEECCcc
Confidence            999721           0        135566666666  888887654

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.93  E-value=2.2e-05  Score=65.07  Aligned_cols=75  Identities=12%  Similarity=0.195  Sum_probs=46.1

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEe-cCCCCChh--hhhhhCCCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQ--LLLDALPHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~--~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      |+|+||.|.||+|.+|+.+++.+.+...  +++++. +|+.+...  ...+..+  +.  . ++.-.+++.+++.   ++
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~--~eLv~~~d~~~~~~~G~d~gel~g--~~--~-gv~v~~dl~~ll~---~~   74 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPD--ATLVGALDRTGSPQLGQDAGAFLG--KQ--T-GVALTDDIERVCA---EA   74 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTT--EEEEEEBCCTTCTTTTSBTTTTTT--CC--C-SCBCBCCHHHHHH---HC
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCC--CEEEEEEEecCcccccccHHHHhC--CC--C-CceecCCHHHHhc---CC
Confidence            7789999999999999999999986543  788774 55433211  0000000  00  0 2222345666666   68


Q ss_pred             CEEEECCC
Q 020880           78 DVVVNCAA   85 (320)
Q Consensus        78 d~Vih~a~   85 (320)
                      |+||+++.
T Consensus        75 DVVIDfT~   82 (272)
T 4f3y_A           75 DYLIDFTL   82 (272)
T ss_dssp             SEEEECSC
T ss_pred             CEEEEcCC
Confidence            99998863

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.93  E-value=1.4e-05  Score=68.94  Aligned_cols=103  Identities=15%  Similarity=0.079  Sum_probs=72.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh-CCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF-GQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~d~Vi   81 (320)
                      +++|||+||+|-||..+++.+...|   .+|+++.|++++.+.....++.  . ...|..+.+..+.+.+.. +++|+||
T Consensus       150 g~~vlI~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~~~~g~--~-~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (336)
T 4b7c_A          150 GETVVISGAAGAVGSVAGQIARLKG---CRVVGIAGGAEKCRFLVEELGF--D-GAIDYKNEDLAAGLKRECPKGIDVFF  223 (336)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHTTCC--S-EEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHcCC--C-EEEECCCHHHHHHHHHhcCCCceEEE
Confidence            5799999999999999999999999   8999999987665554344432  2 345777755444443322 3699999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      +++|..           .        +...++.++..|  ++|.++....+
T Consensus       224 ~~~g~~-----------~--------~~~~~~~l~~~G--~iv~~G~~~~~  253 (336)
T 4b7c_A          224 DNVGGE-----------I--------LDTVLTRIAFKA--RIVLCGAISQY  253 (336)
T ss_dssp             ESSCHH-----------H--------HHHHHTTEEEEE--EEEECCCGGGG
T ss_pred             ECCCcc-----------h--------HHHHHHHHhhCC--EEEEEeecccc
Confidence            998731           0        135666666666  89988876543

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.93  E-value=1.9e-05  Score=68.62  Aligned_cols=99  Identities=13%  Similarity=0.028  Sum_probs=69.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +++|||+||+|-||..+++.+...|   .+|++++|++++.+.. ..++.  . ...|..+.+..+.+.+..  .++|+|
T Consensus       163 g~~vlV~Ga~ggiG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~-~~~g~--~-~~~~~~~~~~~~~~~~~~~~~~~d~v  235 (354)
T 2j8z_A          163 GDYVLIHAGLSGVGTAAIQLTRMAG---AIPLVTAGSQKKLQMA-EKLGA--A-AGFNYKKEDFSEATLKFTKGAGVNLI  235 (354)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHH-HHHTC--S-EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHH-HHcCC--c-EEEecCChHHHHHHHHHhcCCCceEE
Confidence            5789999999999999999999999   8999999986655444 33322  2 346777766555544433  268999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      |+++|..  .                 +...++.++..|  +++.++..
T Consensus       236 i~~~G~~--~-----------------~~~~~~~l~~~G--~iv~~G~~  263 (354)
T 2j8z_A          236 LDCIGGS--Y-----------------WEKNVNCLALDG--RWVLYGLM  263 (354)
T ss_dssp             EESSCGG--G-----------------HHHHHHHEEEEE--EEEECCCT
T ss_pred             EECCCch--H-----------------HHHHHHhccCCC--EEEEEecc
Confidence            9999731  0                 125566666655  78887753

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.86  E-value=3.7e-05  Score=66.39  Aligned_cols=99  Identities=14%  Similarity=-0.008  Sum_probs=68.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +++|||+||+|-||..+++.+...|   .+|+++.|++++.+...+ ++.  . ...|..+.+..+.+.+..  .++|+|
T Consensus       167 g~~vlV~Gasg~iG~~~~~~a~~~G---~~Vi~~~~~~~~~~~~~~-~ga--~-~~~d~~~~~~~~~~~~~~~~~~~d~v  239 (343)
T 2eih_A          167 GDDVLVMAAGSGVSVAAIQIAKLFG---ARVIATAGSEDKLRRAKA-LGA--D-ETVNYTHPDWPKEVRRLTGGKGADKV  239 (343)
T ss_dssp             TCEEEECSTTSTTHHHHHHHHHHTT---CEEEEEESSHHHHHHHHH-HTC--S-EEEETTSTTHHHHHHHHTTTTCEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHh-cCC--C-EEEcCCcccHHHHHHHHhCCCCceEE
Confidence            5789999999999999999999999   889999998665544432 221  2 235777654333333222  268999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      |+++| .. .                 +...++.++..|  ++|.+++.
T Consensus       240 i~~~g-~~-~-----------------~~~~~~~l~~~G--~~v~~g~~  267 (343)
T 2eih_A          240 VDHTG-AL-Y-----------------FEGVIKATANGG--RIAIAGAS  267 (343)
T ss_dssp             EESSC-SS-S-----------------HHHHHHHEEEEE--EEEESSCC
T ss_pred             EECCC-HH-H-----------------HHHHHHhhccCC--EEEEEecC
Confidence            99998 21 0                 135666676666  88888764

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.86  E-value=4.9e-05  Score=64.39  Aligned_cols=79  Identities=6%  Similarity=0.059  Sum_probs=56.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCC---CCChhhhhhhCC--CcceEEEeeCCCcccHHHHHHHhC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHS---TPLPQLLLDALP--HSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~---~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      .+++++|+|+ |-+|+.++..|.+.|   . +|+...|+   .++++.+.+.+.  ..+.....++.+.+.+.+.+.   
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~G---a~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~---  225 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDG---VKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA---  225 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTT---CSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCC---CCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc---
Confidence            3689999996 899999999999999   6 79989998   445544443321  112334456666555666665   


Q ss_pred             CCCEEEECCCcc
Q 020880           76 QPDVVVNCAALS   87 (320)
Q Consensus        76 ~~d~Vih~a~~~   87 (320)
                      ++|+|||+....
T Consensus       226 ~aDiIINaTp~G  237 (315)
T 3tnl_A          226 ESVIFTNATGVG  237 (315)
T ss_dssp             TCSEEEECSSTT
T ss_pred             CCCEEEECccCC
Confidence            899999998643

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.85  E-value=1.6e-05  Score=64.80  Aligned_cols=72  Identities=14%  Similarity=0.092  Sum_probs=56.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++|+|.|+ |.+|+.+++.|.+.|   + |+++.++++....+.    .++.++.+|.+|++.+.++-  +.++|.||.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g---~-v~vid~~~~~~~~~~----~~~~~i~gd~~~~~~l~~a~--i~~ad~vi~   77 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSE---V-FVLAEDENVRKKVLR----SGANFVHGDPTRVSDLEKAN--VRGARAVIV   77 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSE---E-EEEESCGGGHHHHHH----TTCEEEESCTTCHHHHHHTT--CTTCSEEEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCC---e-EEEEECCHHHHHHHh----cCCeEEEcCCCCHHHHHhcC--cchhcEEEE
Confidence            468999996 999999999999999   8 999988876554443    34778999999988776541  238999997


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +.+
T Consensus        78 ~~~   80 (234)
T 2aef_A           78 DLE   80 (234)
T ss_dssp             CCS
T ss_pred             cCC
Confidence            753

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.85  E-value=3.2e-05  Score=66.79  Aligned_cols=99  Identities=15%  Similarity=0.170  Sum_probs=59.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC-CCCChhhhhhhCCCc---------ceEEEeeCCCcccHHHHH
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHS---------FVFFDVDLKSGSGFDAVA   71 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r-~~~~~~~~~~~~~~~---------~~~~~~Dl~d~~~~~~~~   71 (320)
                      +|+||.|.||||++|+.+++.|.+...  +++..+.. +.+....+.+.++..         ......|+ |++.    +
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~--~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~----~   75 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPY--LELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYED----H   75 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSS--EEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGGG----G
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCC--cEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-CHHH----h
Confidence            467999999999999999999887643  78877752 212222222111110         11111232 3322    2


Q ss_pred             HHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        72 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      +   ++|+||-|.+...                  + ..++..+.+.|+ ++|-.|+..
T Consensus        76 ~---~vDvVf~atp~~~------------------s-~~~a~~~~~aG~-~VId~s~~~  111 (350)
T 2ep5_A           76 K---DVDVVLSALPNEL------------------A-ESIELELVKNGK-IVVSNASPF  111 (350)
T ss_dssp             T---TCSEEEECCCHHH------------------H-HHHHHHHHHTTC-EEEECSSTT
T ss_pred             c---CCCEEEECCChHH------------------H-HHHHHHHHHCCC-EEEECCccc
Confidence            3   8999998765320                  0 366777778887 577777764

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.80  E-value=3.4e-05  Score=66.73  Aligned_cols=101  Identities=16%  Similarity=0.056  Sum_probs=69.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +++|||+||+|-||..+++.+...|   .+|++..|++++.+...+.++.  . ...|..+.+++.+.+...  +++|+|
T Consensus       156 g~~vlI~Ga~g~iG~~~~~~a~~~G---~~V~~~~~~~~~~~~~~~~~g~--~-~~~d~~~~~~~~~~~~~~~~~~~d~v  229 (345)
T 2j3h_A          156 GETVYVSAASGAVGQLVGQLAKMMG---CYVVGSAGSKEKVDLLKTKFGF--D-DAFNYKEESDLTAALKRCFPNGIDIY  229 (345)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHTSCC--S-EEEETTSCSCSHHHHHHHCTTCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHcCC--c-eEEecCCHHHHHHHHHHHhCCCCcEE
Confidence            5789999999999999999999999   8899999886655544433432  2 345777654554444432  368999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      |+++|..           .        +...++.++..|  +++.++...
T Consensus       230 i~~~g~~-----------~--------~~~~~~~l~~~G--~~v~~G~~~  258 (345)
T 2j3h_A          230 FENVGGK-----------M--------LDAVLVNMNMHG--RIAVCGMIS  258 (345)
T ss_dssp             EESSCHH-----------H--------HHHHHTTEEEEE--EEEECCCGG
T ss_pred             EECCCHH-----------H--------HHHHHHHHhcCC--EEEEEcccc
Confidence            9998731           0        135566666665  788877543

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.78  E-value=4.3e-05  Score=65.48  Aligned_cols=99  Identities=14%  Similarity=0.061  Sum_probs=69.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhC--CCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFG--QPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~--~~d~V   80 (320)
                      +++|||+||+|-||...++.+...|   .+|+++++++++.+...+ ++.  . ...|..+.+..+.+.+..+  ++|+|
T Consensus       141 g~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~~-~Ga--~-~~~~~~~~~~~~~~~~~~~~~g~Dvv  213 (325)
T 3jyn_A          141 GEIILFHAAAGGVGSLACQWAKALG---AKLIGTVSSPEKAAHAKA-LGA--W-ETIDYSHEDVAKRVLELTDGKKCPVV  213 (325)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESSHHHHHHHHH-HTC--S-EEEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHH-cCC--C-EEEeCCCccHHHHHHHHhCCCCceEE
Confidence            5799999999999999999999999   899999988665544433 322  1 3456666554444444332  69999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      |+++|..                   ++...++.++..|  ++|.++..
T Consensus       214 id~~g~~-------------------~~~~~~~~l~~~G--~iv~~g~~  241 (325)
T 3jyn_A          214 YDGVGQD-------------------TWLTSLDSVAPRG--LVVSFGNA  241 (325)
T ss_dssp             EESSCGG-------------------GHHHHHTTEEEEE--EEEECCCT
T ss_pred             EECCChH-------------------HHHHHHHHhcCCC--EEEEEecC
Confidence            9998731                   0135566666666  88888754

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.77  E-value=4e-05  Score=66.38  Aligned_cols=99  Identities=19%  Similarity=0.240  Sum_probs=58.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC-ChhhhhhhCCCc-----------ceEEEeeCCCcccHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP-LPQLLLDALPHS-----------FVFFDVDLKSGSGFDAV   70 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~-~~~~~~~~~~~~-----------~~~~~~Dl~d~~~~~~~   70 (320)
                      |+||.|.||||+||+.+++.|.+...  ++|+++.++.. ..+.+...++..           +.+  .+. |++.   +
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~--~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~---~   79 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPM--FELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVV--IPT-DPKH---E   79 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSS--EEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBC--EES-CTTS---G
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCC--CEEEEEEcccccccccHHHhcccccccccccCceeeEE--EeC-CHHH---H
Confidence            47999999999999999999987643  78887765322 222222211110           111  111 3332   2


Q ss_pred             HHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhh
Q 020880           71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV  131 (320)
Q Consensus        71 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~v  131 (320)
                      .+  .++|+||-+.+...                  . ..++..+.+.|+ ++|-.|+..-
T Consensus        80 ~~--~~~DvV~~atp~~~------------------~-~~~a~~~~~aG~-~VId~s~~~R  118 (354)
T 1ys4_A           80 EF--EDVDIVFSALPSDL------------------A-KKFEPEFAKEGK-LIFSNASAYR  118 (354)
T ss_dssp             GG--TTCCEEEECCCHHH------------------H-HHHHHHHHHTTC-EEEECCSTTT
T ss_pred             hc--CCCCEEEECCCchH------------------H-HHHHHHHHHCCC-EEEECCchhc
Confidence            22  17999998875320                  0 255666667777 6887787643

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.76  E-value=4.7e-05  Score=66.00  Aligned_cols=98  Identities=16%  Similarity=0.110  Sum_probs=68.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhC--CCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFG--QPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~--~~d~V   80 (320)
                      +++|+|+||+|-||..+++.+...|   .+|++++|++++.+. ...++.  . ...|..+.+..+++.+..+  ++|+|
T Consensus       171 g~~vlV~GasggiG~~~~~~a~~~G---a~Vi~~~~~~~~~~~-~~~~ga--~-~~~d~~~~~~~~~~~~~~~~~~~D~v  243 (351)
T 1yb5_A          171 GESVLVHGASGGVGLAACQIARAYG---LKILGTAGTEEGQKI-VLQNGA--H-EVFNHREVNYIDKIKKYVGEKGIDII  243 (351)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHHH-HHHTTC--S-EEEETTSTTHHHHHHHHHCTTCEEEE
T ss_pred             cCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCChhHHHH-HHHcCC--C-EEEeCCCchHHHHHHHHcCCCCcEEE
Confidence            5789999999999999999999999   889999988665543 333332  2 3457777655544444332  69999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      |+++|..           .        +...++.++..|  ++|.++.
T Consensus       244 i~~~G~~-----------~--------~~~~~~~l~~~G--~iv~~g~  270 (351)
T 1yb5_A          244 IEMLANV-----------N--------LSKDLSLLSHGG--RVIVVGS  270 (351)
T ss_dssp             EESCHHH-----------H--------HHHHHHHEEEEE--EEEECCC
T ss_pred             EECCChH-----------H--------HHHHHHhccCCC--EEEEEec
Confidence            9998731           0        124556666666  7888774

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.74  E-value=2.2e-05  Score=58.68  Aligned_cols=71  Identities=15%  Similarity=0.277  Sum_probs=52.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++|+|.|+ |.+|+.+++.|.+.|   ++|....|++++...+.+.++  ..     ....+++.+.+.   ++|+||.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g---~~v~v~~r~~~~~~~~a~~~~--~~-----~~~~~~~~~~~~---~~Divi~   86 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQ---YKVTVAGRNIDHVRAFAEKYE--YE-----YVLINDIDSLIK---NNDVIIT   86 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTT---CEEEEEESCHHHHHHHHHHHT--CE-----EEECSCHHHHHH---TCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEcCCHHHHHHHHHHhC--Cc-----eEeecCHHHHhc---CCCEEEE
Confidence            579999995 999999999999988   778889998777666555443  11     112234556666   8999999


Q ss_pred             CCCcc
Q 020880           83 CAALS   87 (320)
Q Consensus        83 ~a~~~   87 (320)
                      +.+..
T Consensus        87 at~~~   91 (144)
T 3oj0_A           87 ATSSK   91 (144)
T ss_dssp             CSCCS
T ss_pred             eCCCC
Confidence            87643

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.72  E-value=6.4e-05  Score=64.65  Aligned_cols=99  Identities=11%  Similarity=0.077  Sum_probs=68.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +++|||+||+|-||...++.+...|   .+|+++++++++.+.. ..++..   ...|..+.+..+.+.+..  .++|+|
T Consensus       149 g~~vlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~-~~~ga~---~~~~~~~~~~~~~~~~~~~~~g~D~v  221 (334)
T 3qwb_A          149 GDYVLLFAAAGGVGLILNQLLKMKG---AHTIAVASTDEKLKIA-KEYGAE---YLINASKEDILRQVLKFTNGKGVDAS  221 (334)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSHHHHHHH-HHTTCS---EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHH-HHcCCc---EEEeCCCchHHHHHHHHhCCCCceEE
Confidence            5789999999999999999999999   8999999976655433 334322   345666655444444332  269999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      |+++|..                   ++...++.++..|  ++|.++..
T Consensus       222 id~~g~~-------------------~~~~~~~~l~~~G--~iv~~G~~  249 (334)
T 3qwb_A          222 FDSVGKD-------------------TFEISLAALKRKG--VFVSFGNA  249 (334)
T ss_dssp             EECCGGG-------------------GHHHHHHHEEEEE--EEEECCCT
T ss_pred             EECCChH-------------------HHHHHHHHhccCC--EEEEEcCC
Confidence            9998731                   0135666666666  88888754

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.71  E-value=8.8e-05  Score=63.95  Aligned_cols=99  Identities=13%  Similarity=0.122  Sum_probs=68.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +++|||+||+|-||...++.+...|   .+|+++++++++.+...+ ++..   ...|..+.+..+.+.+..  .++|+|
T Consensus       145 g~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~~-lga~---~~~~~~~~~~~~~~~~~~~~~g~Dvv  217 (340)
T 3gms_A          145 NDVLLVNACGSAIGHLFAQLSQILN---FRLIAVTRNNKHTEELLR-LGAA---YVIDTSTAPLYETVMELTNGIGADAA  217 (340)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESSSTTHHHHHH-HTCS---EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHh-CCCc---EEEeCCcccHHHHHHHHhCCCCCcEE
Confidence            5799999999999999999999999   899999998877655444 3222   344666655444444332  269999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      |+++|...          .         ...++.++..|  ++|.++..
T Consensus       218 id~~g~~~----------~---------~~~~~~l~~~G--~iv~~G~~  245 (340)
T 3gms_A          218 IDSIGGPD----------G---------NELAFSLRPNG--HFLTIGLL  245 (340)
T ss_dssp             EESSCHHH----------H---------HHHHHTEEEEE--EEEECCCT
T ss_pred             EECCCChh----------H---------HHHHHHhcCCC--EEEEEeec
Confidence            99987420          0         13445555555  78888754

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.68  E-value=0.0001  Score=63.73  Aligned_cols=99  Identities=14%  Similarity=0.064  Sum_probs=58.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ++||.|.||||++|+.|++.|.+.++...++..+..+.+......  +.. .....-++. ++.    ++   ++|+||-
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~--~~~-~~~~~~~~~-~~~----~~---~~Dvvf~   70 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK--FKD-QDITIEETT-ETA----FE---GVDIALF   70 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE--ETT-EEEEEEECC-TTT----TT---TCSEEEE
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce--ecC-CCceEeeCC-HHH----hc---CCCEEEE
Confidence            578999999999999999988887643345554433322211111  111 111112222 121    23   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      |++...                  + ...+..+.+.|+ ++|=.|+..-+
T Consensus        71 a~~~~~------------------s-~~~a~~~~~~G~-~vIDlSa~~R~  100 (366)
T 3pwk_A           71 SAGSST------------------S-AKYAPYAVKAGV-VVVDNTSYFRQ  100 (366)
T ss_dssp             CSCHHH------------------H-HHHHHHHHHTTC-EEEECSSTTTT
T ss_pred             CCChHh------------------H-HHHHHHHHHCCC-EEEEcCCcccc
Confidence            876321                  0 256666667787 78888887533

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.68  E-value=2.5e-05  Score=65.26  Aligned_cols=75  Identities=24%  Similarity=0.289  Sum_probs=54.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCC---CcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALP---HSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~---~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      ..++++|+|+ |-+|+.++..|.+.|   . +|+...|+.++.+.+.+.+.   ..+.....++   +++.+.+.   ++
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G---~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~---~~  195 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHG---VQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIA---AA  195 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTT---CSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHH---HS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCC---CCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHh---cC
Confidence            3689999997 899999999999999   6 69999999877766554432   1223233333   34555665   68


Q ss_pred             CEEEECCCc
Q 020880           78 DVVVNCAAL   86 (320)
Q Consensus        78 d~Vih~a~~   86 (320)
                      |+|||+...
T Consensus       196 DiVInaTp~  204 (283)
T 3jyo_A          196 DGVVNATPM  204 (283)
T ss_dssp             SEEEECSST
T ss_pred             CEEEECCCC
Confidence            999999864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.67  E-value=0.00013  Score=62.99  Aligned_cols=97  Identities=18%  Similarity=0.233  Sum_probs=63.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH-hC--CCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK-FG--QPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~--~~d~   79 (320)
                      +++|||+||+|-||...++.+...|   .+|+++++++++.+...+ ++..   ...|..  +++.+.+.. .+  ++|+
T Consensus       160 g~~VlV~Gasg~iG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~~-~ga~---~v~~~~--~~~~~~v~~~~~~~g~Dv  230 (342)
T 4eye_A          160 GETVLVLGAAGGIGTAAIQIAKGMG---AKVIAVVNRTAATEFVKS-VGAD---IVLPLE--EGWAKAVREATGGAGVDM  230 (342)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHH-HTCS---EEEESS--TTHHHHHHHHTTTSCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHh-cCCc---EEecCc--hhHHHHHHHHhCCCCceE
Confidence            5789999999999999999999999   899999998776554433 3221   223444  233333332 22  6999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      ||+++|...                   +...++.++..|  +++.++..
T Consensus       231 vid~~g~~~-------------------~~~~~~~l~~~G--~iv~~G~~  259 (342)
T 4eye_A          231 VVDPIGGPA-------------------FDDAVRTLASEG--RLLVVGFA  259 (342)
T ss_dssp             EEESCC--C-------------------HHHHHHTEEEEE--EEEEC---
T ss_pred             EEECCchhH-------------------HHHHHHhhcCCC--EEEEEEcc
Confidence            999987410                   135666666666  78887754

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.67  E-value=8.2e-05  Score=63.60  Aligned_cols=98  Identities=21%  Similarity=0.229  Sum_probs=60.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC---CChhhhhhhC---CC--cceEEEeeCCCcccHHHHHHHh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST---PLPQLLLDAL---PH--SFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~---~~~~~~~~~~---~~--~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      |+||.|.||||++|+.|++.|.+..+  +++..+..++   +..+.+.+.+   ..  ...+.  ++.+.+.   +.+  
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~--~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~--~~~~~~~---~~~--   74 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPH--MNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQ--PMSDISE---FSP--   74 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTT--EEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEE--EESSGGG---TCT--
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCC--CcEEEEEecCchhhcCCchHHhCccccCccceeEe--ccCCHHH---Hhc--
Confidence            68999999999999999998887432  7887775554   3333332221   11  12221  1102221   213  


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                       ++|+||-|.+...   +                ..++..+.+.|+ ++|=.|+..
T Consensus        75 -~~Dvvf~a~p~~~---s----------------~~~~~~~~~~g~-~vIDlSa~f  109 (337)
T 3dr3_A           75 -GVDVVFLATAHEV---S----------------HDLAPQFLEAGC-VVFDLSGAF  109 (337)
T ss_dssp             -TCSEEEECSCHHH---H----------------HHHHHHHHHTTC-EEEECSSTT
T ss_pred             -CCCEEEECCChHH---H----------------HHHHHHHHHCCC-EEEEcCCcc
Confidence             8999998865320   0                256666677787 788888864

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.66  E-value=4.5e-05  Score=63.54  Aligned_cols=74  Identities=18%  Similarity=0.282  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+++++|+|+ |-+|+.++..|++.|   .+|+...|+.++.+.+.+.++....   .+..+.+.+.+     +++|+||
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G---~~V~v~~R~~~~~~~la~~~~~~~~---~~~~~~~~~~~-----~~~DivV  185 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLD---CAVTITNRTVSRAEELAKLFAHTGS---IQALSMDELEG-----HEFDLII  185 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSHHHHHHHHHHTGGGSS---EEECCSGGGTT-----CCCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcC---CEEEEEECCHHHHHHHHHHhhccCC---eeEecHHHhcc-----CCCCEEE
Confidence            4689999998 679999999999999   7899999987766666554422101   12233333322     3899999


Q ss_pred             ECCCcc
Q 020880           82 NCAALS   87 (320)
Q Consensus        82 h~a~~~   87 (320)
                      ++++..
T Consensus       186 n~t~~~  191 (271)
T 1nyt_A          186 NATSSG  191 (271)
T ss_dssp             ECCSCG
T ss_pred             ECCCCC
Confidence            999864

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.66  E-value=3.4e-05  Score=70.45  Aligned_cols=105  Identities=16%  Similarity=0.156  Sum_probs=66.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +++++|||| |-+|++++..|.+.|   .+|+...|+.++...+.+.++..+    .++.|.+   +..  ...+|++||
T Consensus       364 ~k~vlV~Ga-GGig~aia~~L~~~G---~~V~i~~R~~~~a~~la~~~~~~~----~~~~dl~---~~~--~~~~DilVN  430 (523)
T 2o7s_A          364 SKTVVVIGA-GGAGKALAYGAKEKG---AKVVIANRTYERALELAEAIGGKA----LSLTDLD---NYH--PEDGMVLAN  430 (523)
T ss_dssp             --CEEEECC-SHHHHHHHHHHHHHC---C-CEEEESSHHHHHHHHHHTTC-C----EETTTTT---TC----CCSEEEEE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHcCCce----eeHHHhh---hcc--ccCceEEEE
Confidence            568999998 799999999999999   788888998777766665543221    1232221   111  125899999


Q ss_pred             CCCccCcc------c---cccCchhhhhccccccHHHHHhhhhhccC
Q 020880           83 CAALSVPR------V---CENDPDSAMSINVPSSLVNWLSSFTENKE  120 (320)
Q Consensus        83 ~a~~~~~~------~---~~~~~~~~~~~n~~~~~~~~l~~~~~~~~  120 (320)
                      +++....+      .   ........+++|+.+....+++.+++.|+
T Consensus       431 ~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~T~ll~~a~~~G~  477 (523)
T 2o7s_A          431 TTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGA  477 (523)
T ss_dssp             CSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSSCHHHHHHHTTTC
T ss_pred             CCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCccCHHHHHHHHCCC
Confidence            99864211      1   11223456677776643367777777775

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.66  E-value=9.8e-05  Score=62.94  Aligned_cols=111  Identities=12%  Similarity=0.085  Sum_probs=70.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhh----hhhhC---CCcceEEEeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL----LLDAL---PHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~----~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      ++||.|+|+ |.+|+.++..|+..|.. .+|.+.++++++.+.    +....   +..+.....|   .+    .++   
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~-~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~----a~~---   72 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGIT-DELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE----DCK---   72 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCC-SEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG----GGT---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCC-ceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH----HhC---
Confidence            479999995 99999999999998832 389999887655443    22211   1233322222   11    233   


Q ss_pred             CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      ++|+||.+||....  ........+..|+... ..+.+.+.+...+ .++.+|.
T Consensus        73 ~aDvVvi~ag~p~k--pG~~R~dL~~~N~~Iv-~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           73 DADIVCICAGANQK--PGETRLELVEKNLKIF-KGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             TCSEEEECCSCCCC--TTCCHHHHHHHHHHHH-HHHHHHHHHTTCCSEEEECSS
T ss_pred             CCCEEEEecccCCC--CCccHHHHHHHHHHHH-HHHHHHHHHhcCCeEEEEcCC
Confidence            89999999986322  2234556677786655 3777777665433 5666665

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.66  E-value=7e-05  Score=65.17  Aligned_cols=100  Identities=20%  Similarity=0.131  Sum_probs=68.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +++|||+||+|-||..+++.+...|   .+|+++++++++.+... .++.  . ...|..+.+ +.+.+...  .++|+|
T Consensus       164 g~~VlV~Ga~G~iG~~~~q~a~~~G---a~Vi~~~~~~~~~~~~~-~~Ga--~-~~~~~~~~~-~~~~~~~~~~~g~D~v  235 (362)
T 2c0c_A          164 GKKVLVTAAAGGTGQFAMQLSKKAK---CHVIGTCSSDEKSAFLK-SLGC--D-RPINYKTEP-VGTVLKQEYPEGVDVV  235 (362)
T ss_dssp             TCEEEETTTTBTTHHHHHHHHHHTT---CEEEEEESSHHHHHHHH-HTTC--S-EEEETTTSC-HHHHHHHHCTTCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHH-HcCC--c-EEEecCChh-HHHHHHHhcCCCCCEE
Confidence            5689999999999999999999999   88999998865544433 3332  2 234665543 33333322  268999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhh
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV  131 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~v  131 (320)
                      |+++|..           .        +...++.++..|  ++|.+++...
T Consensus       236 id~~g~~-----------~--------~~~~~~~l~~~G--~iv~~g~~~~  265 (362)
T 2c0c_A          236 YESVGGA-----------M--------FDLAVDALATKG--RLIVIGFISG  265 (362)
T ss_dssp             EECSCTH-----------H--------HHHHHHHEEEEE--EEEECCCGGG
T ss_pred             EECCCHH-----------H--------HHHHHHHHhcCC--EEEEEeCCCC
Confidence            9998731           0        135666666666  8999887653

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.65  E-value=8.7e-05  Score=63.66  Aligned_cols=99  Identities=15%  Similarity=0.113  Sum_probs=59.2

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |+|+||.|.||||+||+.+++.|.++++..++++.+....+...... -.+..+.+  .|+ +++.    +.   ++|+|
T Consensus         1 ~~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~-~~~~~i~~--~~~-~~~~----~~---~vDvV   69 (336)
T 2r00_A            1 SQQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR-FNGKTVRV--QNV-EEFD----WS---QVHIA   69 (336)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE-ETTEEEEE--EEG-GGCC----GG---GCSEE
T ss_pred             CCccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee-ecCceeEE--ecC-ChHH----hc---CCCEE
Confidence            45789999999999999999999887421167776653222111110 00111221  222 2222    23   79999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      |-|.+...                  + ...+..+.+.|+ ++|-.|+.+
T Consensus        70 f~a~g~~~------------------s-~~~a~~~~~~G~-~vId~s~~~   99 (336)
T 2r00_A           70 LFSAGGEL------------------S-AKWAPIAAEAGV-VVIDNTSHF   99 (336)
T ss_dssp             EECSCHHH------------------H-HHHHHHHHHTTC-EEEECSSTT
T ss_pred             EECCCchH------------------H-HHHHHHHHHcCC-EEEEcCCcc
Confidence            99876421                  0 256666677787 788888874

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.65  E-value=3.2e-05  Score=65.89  Aligned_cols=112  Identities=13%  Similarity=0.077  Sum_probs=62.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC------CCcceEEEeeCCCcccHHHHHHHhC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL------PHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      .++||.|+|+ |.+|+.++..|+..|.. .++.+.++++++.+.....+      ...+.....   +.+    .++   
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~-~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~~----a~~---   75 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIA-QEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EYS----DAK---   75 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCC-SEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CGG----GGT---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCC-CeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cHH----Hhc---
Confidence            3679999996 99999999999998842 37888888765444221111      112232221   221    233   


Q ss_pred             CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      ++|+||.+||....  ..+.....++.|+.-. ..+.+.+.+...+ .++.+|.
T Consensus        76 ~aDiVvi~ag~~~k--pG~tR~dL~~~N~~I~-~~i~~~i~~~~p~a~ilvvtN  126 (326)
T 3vku_A           76 DADLVVITAGAPQK--PGETRLDLVNKNLKIL-KSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             TCSEEEECCCCC------------------CH-HHHHHHHHTTTCCSEEEECSS
T ss_pred             CCCEEEECCCCCCC--CCchHHHHHHHHHHHH-HHHHHHHHhcCCceEEEEccC
Confidence            89999999986422  2234566777787665 3777777765533 5666664

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.64  E-value=9.4e-05  Score=64.14  Aligned_cols=100  Identities=17%  Similarity=0.130  Sum_probs=68.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh-CCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF-GQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~d~Vi   81 (320)
                      +++|||+||+|-||..+++.+...|   .+|+++++++++.+...+ ++..   ...|..+.+..+.+.+.. .++|+||
T Consensus       168 g~~VlV~Gg~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~~-lGa~---~~~~~~~~~~~~~~~~~~~~g~Dvvi  240 (353)
T 4dup_A          168 GESVLIHGGTSGIGTTAIQLARAFG---AEVYATAGSTGKCEACER-LGAK---RGINYRSEDFAAVIKAETGQGVDIIL  240 (353)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHH-HTCS---EEEETTTSCHHHHHHHHHSSCEEEEE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHh-cCCC---EEEeCCchHHHHHHHHHhCCCceEEE
Confidence            5799999999999999999999999   899999998766554433 2221   335666655433333221 3799999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      +++|..           .        +...++.++..|  +++.+++..
T Consensus       241 d~~g~~-----------~--------~~~~~~~l~~~G--~iv~~g~~~  268 (353)
T 4dup_A          241 DMIGAA-----------Y--------FERNIASLAKDG--CLSIIAFLG  268 (353)
T ss_dssp             ESCCGG-----------G--------HHHHHHTEEEEE--EEEECCCTT
T ss_pred             ECCCHH-----------H--------HHHHHHHhccCC--EEEEEEecC
Confidence            998731           0        135566666665  788877543

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.62  E-value=3.8e-05  Score=65.25  Aligned_cols=111  Identities=16%  Similarity=0.189  Sum_probs=63.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC-------CcceEEEeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-------HSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      +|||.|+|| |.+|+.++..|...|+  ++|.+.++++++.+.....+.       ...+....  +|   + +.++   
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~--~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~---   69 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKEL--GDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-ADTA---   69 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-GGGT---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--CeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CC---H-HHHC---
Confidence            478999998 9999999999999884  378888888765543222111       11111110  22   2 1233   


Q ss_pred             CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      ++|+||.+++....+  ..........|+... ..+.+.+.+.....+|...|
T Consensus        70 ~aD~Vi~a~g~p~~~--g~~r~dl~~~n~~i~-~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           70 NSDVIVVTSGAPRKP--GMSREDLIKVNADIT-RACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             TCSEEEECCCC----------CHHHHHHHHHH-HHHHHHHGGGCTTCEEEECC
T ss_pred             CCCEEEEcCCCCCCC--CCCHHHHHHHHHHHH-HHHHHHHHhhCCCeEEEEcC
Confidence            899999999864221  112234445555444 36777777665444444333

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.62  E-value=0.00012  Score=63.33  Aligned_cols=98  Identities=12%  Similarity=0.091  Sum_probs=58.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCC-----------cceEEEeeCCCcccHHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH-----------SFVFFDVDLKSGSGFDAVA   71 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~-----------~~~~~~~Dl~d~~~~~~~~   71 (320)
                      ++||.|.||||++|+.|++.|.+.-+  .++..+..+.+..+.+.+.++-           ...+  -+ .+++.    +
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~--~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v--~~-~~~~~----~   77 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNHPY--IKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEI--KP-TDPKL----M   77 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSS--EEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBC--EE-CCGGG----C
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCC--ceEEEEECchhcCCChhHhcccccccccccccccceE--Ee-CCHHH----h
Confidence            35899999999999999997765432  6776665444433333222110           1111  11 12221    2


Q ss_pred             HHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        72 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                         .++|+||-|.+....                   ..++..+.+.|+ ++|=.|+..-.
T Consensus        78 ---~~vDvvf~a~p~~~s-------------------~~~a~~~~~~G~-~vIDlSa~~R~  115 (359)
T 4dpk_A           78 ---DDVDIIFSPLPQGAA-------------------GPVEEQFAKEGF-PVISNSPDHRF  115 (359)
T ss_dssp             ---TTCCEEEECCCTTTH-------------------HHHHHHHHHTTC-EEEECSSTTTT
T ss_pred             ---cCCCEEEECCChHHH-------------------HHHHHHHHHCCC-EEEEcCCCccC
Confidence               389999998764211                   255666667787 78888887543

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.62  E-value=0.00012  Score=63.33  Aligned_cols=98  Identities=12%  Similarity=0.091  Sum_probs=58.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCC-----------cceEEEeeCCCcccHHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH-----------SFVFFDVDLKSGSGFDAVA   71 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~-----------~~~~~~~Dl~d~~~~~~~~   71 (320)
                      ++||.|.||||++|+.|++.|.+.-+  .++..+..+.+..+.+.+.++-           ...+  -+ .+++.    +
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~--~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v--~~-~~~~~----~   77 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNHPY--IKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEI--KP-TDPKL----M   77 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSS--EEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBC--EE-CCGGG----C
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCC--ceEEEEECchhcCCChhHhcccccccccccccccceE--Ee-CCHHH----h
Confidence            35899999999999999997765432  6776665444433333222110           1111  11 12221    2


Q ss_pred             HHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        72 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                         .++|+||-|.+....                   ..++..+.+.|+ ++|=.|+..-.
T Consensus        78 ---~~vDvvf~a~p~~~s-------------------~~~a~~~~~~G~-~vIDlSa~~R~  115 (359)
T 4dpl_A           78 ---DDVDIIFSPLPQGAA-------------------GPVEEQFAKEGF-PVISNSPDHRF  115 (359)
T ss_dssp             ---TTCCEEEECCCTTTH-------------------HHHHHHHHHTTC-EEEECSSTTTT
T ss_pred             ---cCCCEEEECCChHHH-------------------HHHHHHHHHCCC-EEEEcCCCccC
Confidence               389999998764211                   255666667787 78888887543

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.57  E-value=0.00021  Score=62.32  Aligned_cols=97  Identities=18%  Similarity=0.179  Sum_probs=67.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ..+|||+|+ |-||..+++.+...|   .+|+++.+++++.+...+.++..   ...|..+.+.+.++.   +++|+||+
T Consensus       188 g~~VlV~Ga-G~vG~~~~q~a~~~G---a~Vi~~~~~~~~~~~~~~~lGa~---~v~~~~~~~~~~~~~---~~~D~vid  257 (366)
T 1yqd_A          188 GKHIGIVGL-GGLGHVAVKFAKAFG---SKVTVISTSPSKKEEALKNFGAD---SFLVSRDQEQMQAAA---GTLDGIID  257 (366)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCGGGHHHHHHTSCCS---EEEETTCHHHHHHTT---TCEEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHhcCCc---eEEeccCHHHHHHhh---CCCCEEEE
Confidence            578999996 999999999999999   88999998876665544344322   234666654443332   47999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      ++|....                  +...++.++..|  ++|.+++.
T Consensus       258 ~~g~~~~------------------~~~~~~~l~~~G--~iv~~g~~  284 (366)
T 1yqd_A          258 TVSAVHP------------------LLPLFGLLKSHG--KLILVGAP  284 (366)
T ss_dssp             CCSSCCC------------------SHHHHHHEEEEE--EEEECCCC
T ss_pred             CCCcHHH------------------HHHHHHHHhcCC--EEEEEccC
Confidence            9874210                  125566666665  88888764

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.57  E-value=0.00018  Score=62.21  Aligned_cols=98  Identities=12%  Similarity=0.096  Sum_probs=66.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVVV   81 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~Vi   81 (320)
                      ++|+|+||+|-||...++.+...|   .+|+++++++++.+...+ ++..   ...|..+.+..+.+.+..  .++|+||
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~G---a~Vi~~~~~~~~~~~~~~-~Ga~---~~~~~~~~~~~~~v~~~~~~~g~D~vi  238 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEG---FRPIVTVRRDEQIALLKD-IGAA---HVLNEKAPDFEATLREVMKAEQPRIFL  238 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESCGGGHHHHHH-HTCS---EEEETTSTTHHHHHHHHHHHHCCCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHH-cCCC---EEEECCcHHHHHHHHHHhcCCCCcEEE
Confidence            689999999999999999999999   899999998776554433 3321   234665544333332211  2799999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      +++|...                   ....++.++..|  ++|.+++.
T Consensus       239 d~~g~~~-------------------~~~~~~~l~~~G--~iv~~G~~  265 (349)
T 3pi7_A          239 DAVTGPL-------------------ASAIFNAMPKRA--RWIIYGRL  265 (349)
T ss_dssp             ESSCHHH-------------------HHHHHHHSCTTC--EEEECCCS
T ss_pred             ECCCChh-------------------HHHHHhhhcCCC--EEEEEecc
Confidence            9987310                   025556666666  88888754

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.57  E-value=0.00064  Score=55.33  Aligned_cols=75  Identities=17%  Similarity=0.196  Sum_probs=53.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      |||.|.|++|-+|+.+++.+.+. +   +++.+.....+....+...   ... +..|++.++...+.+...  .+.++|
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~---~elva~~d~~~dl~~~~~~---~~D-vvIDfT~p~a~~~~~~~a~~~g~~~V   73 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADD---LTLSAELDAGDPLSLLTDG---NTE-VVIDFTHPDVVMGNLEFLIDNGIHAV   73 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTT---CEEEEEECTTCCTHHHHHT---TCC-EEEECSCTTTHHHHHHHHHHTTCEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC---CEEEEEEccCCCHHHHhcc---CCc-EEEEccChHHHHHHHHHHHHcCCCEE
Confidence            48999999999999999998865 6   7887666554444443331   122 788999999876554321  378888


Q ss_pred             EECCC
Q 020880           81 VNCAA   85 (320)
Q Consensus        81 ih~a~   85 (320)
                      +-..|
T Consensus        74 igTTG   78 (245)
T 1p9l_A           74 VGTTG   78 (245)
T ss_dssp             ECCCC
T ss_pred             EcCCC
Confidence            86554

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=97.57  E-value=0.00014  Score=63.22  Aligned_cols=101  Identities=25%  Similarity=0.244  Sum_probs=58.7

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEec-CCCCChhhhhhhCC-----------CcceEEEeeCCCcccHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLDALP-----------HSFVFFDVDLKSGSGFD   68 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~-r~~~~~~~~~~~~~-----------~~~~~~~~Dl~d~~~~~   68 (320)
                      |+|+||.|.||||++|+.|++.|.+.-+  .++..+. .+.+..+...+.++           ....  .-|+...+.  
T Consensus        17 M~~~kVaIvGAtG~vG~ell~lL~~hp~--~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~--v~~~~~~~~--   90 (381)
T 3hsk_A           17 MSVKKAGVLGATGSVGQRFILLLSKHPE--FEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIV--VQECKPEGN--   90 (381)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCSS--EEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCB--CEESSSCTT--
T ss_pred             CCccEEEEECCCChHHHHHHHHHHcCCC--ceEEEeeccccccCCCHHHhcccccccccccccccce--EEeCchhhh--
Confidence            6778999999999999999997776532  6775543 22222222221110           0111  112222111  


Q ss_pred             HHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        69 ~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                        ++   ++|+||-|.+...   +                ..++..+.+.|+ ++|=.|+..-+
T Consensus        91 --~~---~~Dvvf~alp~~~---s----------------~~~~~~~~~~G~-~VIDlSa~fR~  129 (381)
T 3hsk_A           91 --FL---ECDVVFSGLDADV---A----------------GDIEKSFVEAGL-AVVSNAKNYRR  129 (381)
T ss_dssp             --GG---GCSEEEECCCHHH---H----------------HHHHHHHHHTTC-EEEECCSTTTT
T ss_pred             --cc---cCCEEEECCChhH---H----------------HHHHHHHHhCCC-EEEEcCCcccC
Confidence              23   7999998875320   0                256666677787 78888887654

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.54  E-value=4e-05  Score=65.30  Aligned_cols=112  Identities=18%  Similarity=0.179  Sum_probs=69.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhC-------CCcceEEEeeCCCcccHHHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDAL-------PHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      |.++||.|+|| |.+|+.++..|...|   + +|.+.++++++.+.....+       ..... +.+. .|.    +.++
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~---~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~-v~~t-~d~----~a~~   74 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKE---LGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAK-FTGA-NDY----AAIE   74 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTT---CCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCC-EEEE-SSG----GGGT
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCC---CCeEEEEeCCchhHHHHHHHHhchhhhcCCCCE-EEEe-CCH----HHHC
Confidence            67789999997 999999999999998   5 8999999887653221111       11122 2211 122    2343


Q ss_pred             HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           73 KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                         ++|+||.+||....+  .......+..|+... ..+.+.+.+.... .+|.+|.
T Consensus        75 ---~aDiVIiaag~p~k~--G~~R~dl~~~N~~i~-~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           75 ---GADVVIVTAGVPRKP--GMSRDDLLGINLKVM-EQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             ---TCSEEEECCSCCCC-------CHHHHHHHHHH-HHHHHHHHHHCTTCEEEECCS
T ss_pred             ---CCCEEEEccCcCCCC--CCCHHHHHHhhHHHH-HHHHHHHHHHCCCeEEEecCC
Confidence               899999999864221  223455666676554 3677777665432 6666665

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.53  E-value=7.9e-05  Score=63.44  Aligned_cols=112  Identities=20%  Similarity=0.190  Sum_probs=72.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhC-------CCcceEEEeeCCCcccHHHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDAL-------PHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      |.++||.|+| +|.+|+.++..|...|   . +|.+.++++++.+.....+       +.... +.+. .|.+    .++
T Consensus         3 m~~~kI~iiG-aG~vG~~~a~~l~~~~---~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~-v~~t-~d~~----a~~   72 (321)
T 3p7m_A            3 MARKKITLVG-AGNIGGTLAHLALIKQ---LGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFK-VRGT-NDYK----DLE   72 (321)
T ss_dssp             CCCCEEEEEC-CSHHHHHHHHHHHHTT---CCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCC-EEEE-SCGG----GGT
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCC---CceEEEEeCChHHHHHHHHHHHhhhhhcCCCcE-EEEc-CCHH----HHC
Confidence            6778999999 5999999999999988   5 8999999887654222111       11222 2221 1222    344


Q ss_pred             HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           73 KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                         ++|+||.+||....  ........+..|+... ..+++.+.+.... .+|.+|.
T Consensus        73 ---~aDvVIi~ag~p~k--~G~~R~dl~~~N~~i~-~~i~~~i~~~~p~a~vivvtN  123 (321)
T 3p7m_A           73 ---NSDVVIVTAGVPRK--PGMSRDDLLGINIKVM-QTVGEGIKHNCPNAFVICITN  123 (321)
T ss_dssp             ---TCSEEEECCSCCCC--TTCCHHHHHHHHHHHH-HHHHHHHHHHCTTCEEEECCS
T ss_pred             ---CCCEEEEcCCcCCC--CCCCHHHHHHHhHHHH-HHHHHHHHHHCCCcEEEEecC
Confidence               89999999986422  1234456677776655 3777777665533 6666654

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.53  E-value=0.00015  Score=54.92  Aligned_cols=72  Identities=21%  Similarity=0.284  Sum_probs=52.6

Q ss_pred             CChhhHHHHHHHhhccCCCceEEEecCCCCCh------hhhhhhCCCcceEEEeeCCCc--ccHHHHHHH----hCCCCE
Q 020880           12 TGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP------QLLLDALPHSFVFFDVDLKSG--SGFDAVALK----FGQPDV   79 (320)
Q Consensus        12 tG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~----~~~~d~   79 (320)
                      +|.++...++.|.+.|   ++|+...|++...      .......+.....+.+|++++  +++.++++.    +++ |+
T Consensus        25 s~~p~~a~a~~La~~G---a~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dV  100 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAG---VDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DV  100 (157)
T ss_dssp             EBCCCHHHHHHHHHTT---CCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CE
T ss_pred             cCCCCHHHHHHHHHcC---CCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CE
Confidence            4789999999999999   8888877765432      223333444566678899999  887776643    455 99


Q ss_pred             EEECCCcc
Q 020880           80 VVNCAALS   87 (320)
Q Consensus        80 Vih~a~~~   87 (320)
                      +|||||..
T Consensus       101 LVnnAgg~  108 (157)
T 3gxh_A          101 LVHCLANY  108 (157)
T ss_dssp             EEECSBSH
T ss_pred             EEECCCCC
Confidence            99999853

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.51  E-value=0.00019  Score=61.82  Aligned_cols=99  Identities=17%  Similarity=0.088  Sum_probs=66.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +++|||+|| |-||..+++.+...|   .+|+++.|++++.+... .++.  . ...|..+.+..+.+.+..+++|+||+
T Consensus       165 g~~VlV~Ga-G~vG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~-~lGa--~-~~~d~~~~~~~~~~~~~~~~~d~vid  236 (339)
T 1rjw_A          165 GEWVAIYGI-GGLGHVAVQYAKAMG---LNVVAVDIGDEKLELAK-ELGA--D-LVVNPLKEDAAKFMKEKVGGVHAAVV  236 (339)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTT---CEEEEECSCHHHHHHHH-HTTC--S-EEECTTTSCHHHHHHHHHSSEEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHH-HCCC--C-EEecCCCccHHHHHHHHhCCCCEEEE
Confidence            578999999 669999999999999   89999999866554433 3332  2 23577664433333222248999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      ++|..         . .        +...++.++..|  ++|.+++.
T Consensus       237 ~~g~~---------~-~--------~~~~~~~l~~~G--~~v~~g~~  263 (339)
T 1rjw_A          237 TAVSK---------P-A--------FQSAYNSIRRGG--ACVLVGLP  263 (339)
T ss_dssp             SSCCH---------H-H--------HHHHHHHEEEEE--EEEECCCC
T ss_pred             CCCCH---------H-H--------HHHHHHHhhcCC--EEEEeccc
Confidence            98731         0 0        135666666666  78887753

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.48  E-value=0.00037  Score=58.62  Aligned_cols=84  Identities=23%  Similarity=0.255  Sum_probs=56.2

Q ss_pred             CcE-EEEE-cCC-----------------ChhhHHHHHHHhhccCCCceEEEecCCCCChhhh--------hhh------
Q 020880            3 KKR-VLVV-GGT-----------------GYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL--------LDA------   49 (320)
Q Consensus         3 ~~~-ilIt-Gat-----------------G~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~--------~~~------   49 (320)
                      +++ |||| |+|                 |-.|.++++.++.+|   ++|+.+.|+.+.....        .+.      
T Consensus        36 gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~G---a~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           36 GRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAG---YGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             TCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTT---CEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             CCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCC---CEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            456 9999 666                 999999999999999   8888888864321110        010      


Q ss_pred             CCCcceEEEeeCCCcccHHHHHH----------------------------------HhCCCCEEEECCCccCc
Q 020880           50 LPHSFVFFDVDLKSGSGFDAVAL----------------------------------KFGQPDVVVNCAALSVP   89 (320)
Q Consensus        50 ~~~~~~~~~~Dl~d~~~~~~~~~----------------------------------~~~~~d~Vih~a~~~~~   89 (320)
                      -+.+...+..|+...+.+.+++.                                  .+++.|++|++|+....
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf  186 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDF  186 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhc
Confidence            01233356777777666555542                                  23478999999998653

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.48  E-value=0.0003  Score=59.51  Aligned_cols=78  Identities=12%  Similarity=0.135  Sum_probs=52.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCC---CCChhhhhhhCCC--cceEEEeeCCCcccHHHHHHHhCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHS---TPLPQLLLDALPH--SFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~---~~~~~~~~~~~~~--~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      +++++|+|+ |-+|+.++..|.+.|   . +|+...|+   .++++.+.+.+..  .......++.+.+.+.+.+.   +
T Consensus       148 gk~~lVlGA-GGaaraia~~L~~~G---~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~---~  220 (312)
T 3t4e_A          148 GKTMVLLGA-GGAATAIGAQAAIEG---IKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA---S  220 (312)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTT---CSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---H
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHcC---CCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc---C
Confidence            689999996 889999999999999   5 78999998   4445544443211  12223345555322344455   6


Q ss_pred             CCEEEECCCcc
Q 020880           77 PDVVVNCAALS   87 (320)
Q Consensus        77 ~d~Vih~a~~~   87 (320)
                      +|+|||+....
T Consensus       221 ~DiIINaTp~G  231 (312)
T 3t4e_A          221 ADILTNGTKVG  231 (312)
T ss_dssp             CSEEEECSSTT
T ss_pred             ceEEEECCcCC
Confidence            89999987654

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.46  E-value=0.00047  Score=58.35  Aligned_cols=114  Identities=14%  Similarity=0.107  Sum_probs=69.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |||.|+||+|.||+.++..|..+ +.. .++.+++..+ +......   ....... +.+=.++ + ..+.++   ++|+
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~-~el~L~Di~~-~~~G~a~Dl~~~~~~~~-v~~~~~~-~-~~~~~~---~aDi   72 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSG-SELSLYDIAP-VTPGVAVDLSHIPTAVK-IKGFSGE-D-ATPALE---GADV   72 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTT-EEEEEECSST-THHHHHHHHHTSCSSEE-EEEECSS-C-CHHHHT---TCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCC-ceEEEEecCC-CchhHHHHhhCCCCCce-EEEecCC-C-cHHHhC---CCCE
Confidence            58999999999999999988776 432 5788888876 3222111   1111112 1110110 1 123444   8999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      ||-+||....  ......+.++.|+... ..+.+.+.+...+ .++.+|.
T Consensus        73 vii~ag~~rk--pG~~R~dll~~N~~I~-~~i~~~i~~~~p~a~vlvvtN  119 (312)
T 3hhp_A           73 VLISAGVARK--PGMDRSDLFNVNAGIV-KNLVQQVAKTCPKACIGIITN  119 (312)
T ss_dssp             EEECCSCSCC--TTCCHHHHHHHHHHHH-HHHHHHHHHHCTTSEEEECSS
T ss_pred             EEEeCCCCCC--CCCCHHHHHHHHHHHH-HHHHHHHHHHCCCcEEEEecC
Confidence            9999986432  2345677788887665 3777777665432 5666665

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.45  E-value=0.00026  Score=61.17  Aligned_cols=77  Identities=14%  Similarity=0.110  Sum_probs=55.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~   79 (320)
                      +++|||+||+|-||..+++.+... |   .+|++..+++++.+... .++.  . ...|..+.+..+++.+..  +++|+
T Consensus       171 g~~vlV~Gagg~iG~~~~~~a~~~~G---a~Vi~~~~~~~~~~~~~-~~g~--~-~~~~~~~~~~~~~~~~~~~~~~~d~  243 (347)
T 1jvb_A          171 TKTLLVVGAGGGLGTMAVQIAKAVSG---ATIIGVDVREEAVEAAK-RAGA--D-YVINASMQDPLAEIRRITESKGVDA  243 (347)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTC---CEEEEEESSHHHHHHHH-HHTC--S-EEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CCEEEEECCCccHHHHHHHHHHHcCC---CeEEEEcCCHHHHHHHH-HhCC--C-EEecCCCccHHHHHHHHhcCCCceE
Confidence            578999999999999999999998 9   88999988865544432 2221  1 345777755443333332  36899


Q ss_pred             EEECCCc
Q 020880           80 VVNCAAL   86 (320)
Q Consensus        80 Vih~a~~   86 (320)
                      ||+++|.
T Consensus       244 vi~~~g~  250 (347)
T 1jvb_A          244 VIDLNNS  250 (347)
T ss_dssp             EEESCCC
T ss_pred             EEECCCC
Confidence            9999873

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.40  E-value=0.00016  Score=60.96  Aligned_cols=75  Identities=15%  Similarity=0.174  Sum_probs=53.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      ..++|+|+|+ |-+|+.++..|++.|   . +|+...|+.++.+.+.+.++....    +..+.+++.+.+   .++|+|
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G---~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~~~~~---~~aDiv  208 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTA---AERIDMANRTVEKAERLVREGDERRS----AYFSLAEAETRL---AEYDII  208 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTT---CSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHHHHTG---GGCSEE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCC---CCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHHHhhh---ccCCEE
Confidence            3689999996 779999999999999   6 899999998777776665432110    111112233333   379999


Q ss_pred             EECCCcc
Q 020880           81 VNCAALS   87 (320)
Q Consensus        81 ih~a~~~   87 (320)
                      |++.+..
T Consensus       209 In~t~~~  215 (297)
T 2egg_A          209 INTTSVG  215 (297)
T ss_dssp             EECSCTT
T ss_pred             EECCCCC
Confidence            9998764

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.39  E-value=0.00048  Score=60.11  Aligned_cols=75  Identities=13%  Similarity=0.154  Sum_probs=54.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ..++|+|+|+ |-||+.+++.+...|   .+|++..|++++.+...+.++..+   ..+..+.+++.+.+.   ++|+||
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~G---a~V~~~d~~~~~l~~~~~~~g~~~---~~~~~~~~~l~~~l~---~aDvVi  236 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMG---ATVTVLDINIDKLRQLDAEFCGRI---HTRYSSAYELEGAVK---RADLVI  236 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTTTSS---EEEECCHHHHHHHHH---HCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHhcCCee---EeccCCHHHHHHHHc---CCCEEE
Confidence            3579999997 999999999999999   889999998765544444333322   223344455666666   789999


Q ss_pred             ECCCc
Q 020880           82 NCAAL   86 (320)
Q Consensus        82 h~a~~   86 (320)
                      .+++.
T Consensus       237 ~~~~~  241 (377)
T 2vhw_A          237 GAVLV  241 (377)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            98764

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.39  E-value=0.0004  Score=57.61  Aligned_cols=73  Identities=18%  Similarity=0.215  Sum_probs=51.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+++++|+|+ |-+|+.++..|.+.|.  .+|+...|+.++.+.+.+.+.. ......++.+   +..     .++|+||
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~--~~v~i~~R~~~~a~~la~~~~~-~~~~~~~~~~---l~~-----~~~DivI  186 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGP--SELVIANRDMAKALALRNELDH-SRLRISRYEA---LEG-----QSFDIVV  186 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCC--SEEEEECSCHHHHHHHHHHHCC-TTEEEECSGG---GTT-----CCCSEEE
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCC--CEEEEEeCCHHHHHHHHHHhcc-CCeeEeeHHH---hcc-----cCCCEEE
Confidence            3689999996 7899999999999993  2899999998777776665432 1111222222   221     2899999


Q ss_pred             ECCCc
Q 020880           82 NCAAL   86 (320)
Q Consensus        82 h~a~~   86 (320)
                      ++...
T Consensus       187 naTp~  191 (272)
T 3pwz_A          187 NATSA  191 (272)
T ss_dssp             ECSSG
T ss_pred             ECCCC
Confidence            98754

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.36  E-value=0.00015  Score=58.42  Aligned_cols=68  Identities=18%  Similarity=0.185  Sum_probs=48.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEE-ecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAA-THHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |+||+|.|.| +|.+|+.+++.|.+.|   ++|.. ..|++++.+.+.+.++.  ... .  .+    .+.++   ++|+
T Consensus        21 m~mmkI~IIG-~G~mG~~la~~l~~~g---~~V~~v~~r~~~~~~~l~~~~g~--~~~-~--~~----~~~~~---~aDv   84 (220)
T 4huj_A           21 QSMTTYAIIG-AGAIGSALAERFTAAQ---IPAIIANSRGPASLSSVTDRFGA--SVK-A--VE----LKDAL---QADV   84 (220)
T ss_dssp             GGSCCEEEEE-CHHHHHHHHHHHHHTT---CCEEEECTTCGGGGHHHHHHHTT--TEE-E--CC----HHHHT---TSSE
T ss_pred             hcCCEEEEEC-CCHHHHHHHHHHHhCC---CEEEEEECCCHHHHHHHHHHhCC--Ccc-c--Ch----HHHHh---cCCE
Confidence            5578999999 8999999999999999   78888 88887777665554321  111 1  11    22343   7999


Q ss_pred             EEECC
Q 020880           80 VVNCA   84 (320)
Q Consensus        80 Vih~a   84 (320)
                      ||-+.
T Consensus        85 Vilav   89 (220)
T 4huj_A           85 VILAV   89 (220)
T ss_dssp             EEEES
T ss_pred             EEEeC
Confidence            99775

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.35  E-value=0.00023  Score=63.81  Aligned_cols=74  Identities=14%  Similarity=0.232  Sum_probs=61.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .|||+|.| .|-+|++|++.|.++|   ++|+...++++....+.+.+  .+..+.+|-++++.++++=-  .++|.+|-
T Consensus         3 ~M~iiI~G-~G~vG~~la~~L~~~~---~~v~vId~d~~~~~~~~~~~--~~~~i~Gd~~~~~~L~~Agi--~~ad~~ia   74 (461)
T 4g65_A            3 AMKIIILG-AGQVGGTLAENLVGEN---NDITIVDKDGDRLRELQDKY--DLRVVNGHASHPDVLHEAGA--QDADMLVA   74 (461)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHTCSTT---EEEEEEESCHHHHHHHHHHS--SCEEEESCTTCHHHHHHHTT--TTCSEEEE
T ss_pred             cCEEEEEC-CCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHhc--CcEEEEEcCCCHHHHHhcCC--CcCCEEEE
Confidence            58999999 5999999999999999   89999999987777766655  46779999999998876522  48999985


Q ss_pred             CC
Q 020880           83 CA   84 (320)
Q Consensus        83 ~a   84 (320)
                      +.
T Consensus        75 ~t   76 (461)
T 4g65_A           75 VT   76 (461)
T ss_dssp             CC
T ss_pred             Ec
Confidence            53

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.35  E-value=0.00024  Score=60.13  Aligned_cols=94  Identities=19%  Similarity=0.173  Sum_probs=61.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCC-cccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS-GSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~d~Vi   81 (320)
                      +++|+|+||+|-+|..+++.+...|   .+|+++++++++.+... .++.  . ...|..+ .+ +.+   .+.++|+||
T Consensus       126 g~~vlV~Ga~G~vG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~-~~ga--~-~~~~~~~~~~-~~~---~~~~~d~vi  194 (302)
T 1iz0_A          126 GEKVLVQAAAGALGTAAVQVARAMG---LRVLAAASRPEKLALPL-ALGA--E-EAATYAEVPE-RAK---AWGGLDLVL  194 (302)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSGGGSHHHH-HTTC--S-EEEEGGGHHH-HHH---HTTSEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHH-hcCC--C-EEEECCcchh-HHH---HhcCceEEE
Confidence            5789999999999999999999999   88999999876655443 3332  2 2345544 22 222   224899999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      + +|..  .                 +...++.++..|  +++.++..
T Consensus       195 d-~g~~--~-----------------~~~~~~~l~~~G--~~v~~g~~  220 (302)
T 1iz0_A          195 E-VRGK--E-----------------VEESLGLLAHGG--RLVYIGAA  220 (302)
T ss_dssp             E-CSCT--T-----------------HHHHHTTEEEEE--EEEEC---
T ss_pred             E-CCHH--H-----------------HHHHHHhhccCC--EEEEEeCC
Confidence            9 7631  0                 135566666666  78887654

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.34  E-value=0.00049  Score=59.61  Aligned_cols=98  Identities=17%  Similarity=0.105  Sum_probs=54.9

Q ss_pred             CcEEEEEcCCChhhHHHHHH-HhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQG-LSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~-L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      |+||.|.||||++|+.|++. |.+.++.+.+++.+..++ ..... ..+.+ ......|..+++   + ++   ++|+||
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v-~~~~g-~~i~~~~~~~~~---~-~~---~~DvVf   70 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAA-PSFGG-TTGTLQDAFDLE---A-LK---ALDIIV   70 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBC-CGGGT-CCCBCEETTCHH---H-HH---TCSEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCc-cccCC-CceEEEecCChH---H-hc---CCCEEE
Confidence            47899999999999999995 444443334565554432 21111 10100 111223443433   2 34   899999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeech
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTD  129 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~  129 (320)
                      -|.+...                  + ..++..+.+.|++ .+|=.||.
T Consensus        71 ~a~g~~~------------------s-~~~a~~~~~~G~k~vVID~ss~  100 (367)
T 1t4b_A           71 TCQGGDY------------------T-NEIYPKLRESGWQGYWIDAASS  100 (367)
T ss_dssp             ECSCHHH------------------H-HHHHHHHHHTTCCCEEEECSST
T ss_pred             ECCCchh------------------H-HHHHHHHHHCCCCEEEEcCChh
Confidence            9876320                  0 2566667777874 34444544

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.33  E-value=0.00018  Score=61.32  Aligned_cols=111  Identities=12%  Similarity=0.082  Sum_probs=63.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCC------cceEEEeeCCCcccHHHHHHHhCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH------SFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~------~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      ++||.|+|+ |.+|+.++-.|+..|.. -+|.+.+.++++.+.....+.+      .+. +..  .+.+    .++   +
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~-~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~-i~~--~~~~----a~~---~   74 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTA-NELVLIDVFKEKAIGEAMDINHGLPFMGQMS-LYA--GDYS----DVK---D   74 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCS-SEEEEECCC---CCHHHHHHTTSCCCTTCEE-EC----CGG----GGT---T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCC-CEEEEEeCChHHHHHHHHHHHHhHHhcCCeE-EEE--CCHH----HhC---C
Confidence            468999997 99999999999988832 3899999887654432222111      222 111  2222    233   8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      +|+||.+++...-+  ..........|+... ..+++.+.+.... .+|..|.
T Consensus        75 aDvVii~~g~p~k~--g~~r~dl~~~n~~i~-~~i~~~i~~~~p~a~viv~tN  124 (318)
T 1y6j_A           75 CDVIVVTAGANRKP--GETRLDLAKKNVMIA-KEVTQNIMKYYNHGVILVVSN  124 (318)
T ss_dssp             CSEEEECCCC--------CHHHHHHHHHHHH-HHHHHHHHHHCCSCEEEECSS
T ss_pred             CCEEEEcCCCCCCC--CcCHHHHHHhhHHHH-HHHHHHHHHhCCCcEEEEecC
Confidence            99999999863211  123345566666554 3677777665433 4555443

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=97.31  E-value=0.00084  Score=54.56  Aligned_cols=36  Identities=17%  Similarity=0.339  Sum_probs=28.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEE-ecCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAA-THHST   40 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~-~~r~~   40 (320)
                      |+|+||.|.|+ |.+|+.+++.+.+++   .++++ .+|+.
T Consensus         1 M~MmkI~ViGa-GrMG~~i~~~l~~~~---~eLva~~d~~~   37 (243)
T 3qy9_A            1 MASMKILLIGY-GAMNQRVARLAEEKG---HEIVGVIENTP   37 (243)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEECSSC
T ss_pred             CCceEEEEECc-CHHHHHHHHHHHhCC---CEEEEEEecCc
Confidence            77899999999 999999999999887   45554 45543

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.30  E-value=0.0004  Score=60.02  Aligned_cols=99  Identities=18%  Similarity=0.075  Sum_probs=64.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~   79 (320)
                      +.+|||+|| |-||..+++.+...|   . +|+++.+++++.+... .++.  . ...|..+.+..+.+.+..  .++|+
T Consensus       168 g~~VlV~Ga-G~vG~~~~q~a~~~G---a~~Vi~~~~~~~~~~~~~-~~Ga--~-~~~~~~~~~~~~~v~~~~~g~g~D~  239 (348)
T 2d8a_A          168 GKSVLITGA-GPLGLLGIAVAKASG---AYPVIVSEPSDFRRELAK-KVGA--D-YVINPFEEDVVKEVMDITDGNGVDV  239 (348)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTT---CCSEEEECSCHHHHHHHH-HHTC--S-EEECTTTSCHHHHHHHHTTTSCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC---CCEEEEECCCHHHHHHHH-HhCC--C-EEECCCCcCHHHHHHHHcCCCCCCE
Confidence            468999999 999999999999999   7 8999998865544332 2221  2 234665544333333222  26899


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      ||++++..         . .        +...++.++..|  ++|.+++.
T Consensus       240 vid~~g~~---------~-~--------~~~~~~~l~~~G--~iv~~g~~  269 (348)
T 2d8a_A          240 FLEFSGAP---------K-A--------LEQGLQAVTPAG--RVSLLGLY  269 (348)
T ss_dssp             EEECSCCH---------H-H--------HHHHHHHEEEEE--EEEECCCC
T ss_pred             EEECCCCH---------H-H--------HHHHHHHHhcCC--EEEEEccC
Confidence            99998731         0 0        135566666666  88888763

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.29  E-value=0.00033  Score=57.48  Aligned_cols=105  Identities=21%  Similarity=0.185  Sum_probs=64.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-------------------CChhhhhhhC---CCc--ceEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-------------------PLPQLLLDAL---PHS--FVFFD   58 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-------------------~~~~~~~~~~---~~~--~~~~~   58 (320)
                      .++|+|.| .|-+|+++++.|...|.  -+++..+++.                   .+.+...+.+   .+.  +..+.
T Consensus        31 ~~~VlVvG-~Gg~G~~va~~La~~Gv--~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           31 DSRVLIVG-LGGLGCAASQYLASAGV--GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTC--SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             CCeEEEEe-eCHHHHHHHHHHHHcCC--CeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            46899999 58899999999999993  3777777775                   3333332221   122  33334


Q ss_pred             eeCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        59 ~Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      .++++ +.+.+.++   ++|+||.+...         ++.    +     ..+.+.|.+.++ .+|+.+....+|
T Consensus       108 ~~~~~-~~~~~~~~---~~DvVi~~~d~---------~~~----~-----~~l~~~~~~~~~-p~i~~~~~g~~g  159 (249)
T 1jw9_B          108 ALLDD-AELAALIA---EHDLVLDCTDN---------VAV----R-----NQLNAGCFAAKV-PLVSGAAIRMEG  159 (249)
T ss_dssp             SCCCH-HHHHHHHH---TSSEEEECCSS---------HHH----H-----HHHHHHHHHHTC-CEEEEEEEBTEE
T ss_pred             ccCCH-hHHHHHHh---CCCEEEEeCCC---------HHH----H-----HHHHHHHHHcCC-CEEEeeeccceE
Confidence            44543 34555555   89999988531         111    0     256666777776 677765544333

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.27  E-value=0.00029  Score=56.42  Aligned_cols=66  Identities=14%  Similarity=0.179  Sum_probs=46.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ++|+|.|+| +|.+|+.+++.|.+.|   ++|.+..|++++.+.+.+.   ++...        ++.++++   ++|+||
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g---~~V~~~~r~~~~~~~~~~~---g~~~~--------~~~~~~~---~~DvVi   88 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSG---FKVVVGSRNPKRTARLFPS---AAQVT--------FQEEAVS---SPEVIF   88 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTT---CCEEEEESSHHHHHHHSBT---TSEEE--------EHHHHTT---SCSEEE
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHc---CCcee--------cHHHHHh---CCCEEE
Confidence            357899999 8999999999999999   7888888886555443321   23321        2444444   899999


Q ss_pred             ECCC
Q 020880           82 NCAA   85 (320)
Q Consensus        82 h~a~   85 (320)
                      .+..
T Consensus        89 ~av~   92 (215)
T 2vns_A           89 VAVF   92 (215)
T ss_dssp             ECSC
T ss_pred             ECCC
Confidence            8764

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.26  E-value=0.00012  Score=62.40  Aligned_cols=112  Identities=15%  Similarity=0.144  Sum_probs=66.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhh----hh---CCCcceEEEeeCCCcccHHHHHHHh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL----DA---LPHSFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~----~~---~~~~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      +++||.|+|| |.+|+.++..|+.+|.. .+|.+.+.++++.+...    ..   .+..+. +..|  +.+    .++  
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~-~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~-v~~~--~~~----a~~--   73 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIV-DELVIIDLDTEKVRGDVMDLKHATPYSPTTVR-VKAG--EYS----DCH--   73 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSC-SEEEEECSCHHHHHHHHHHHHHHGGGSSSCCE-EEEC--CGG----GGT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCC-CEEEEEeCChhHhhhhhhhHHhhhhhcCCCeE-EEeC--CHH----HhC--
Confidence            4569999998 99999999999988742 47888887754333211    11   112223 2232  222    244  


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                       ++|+||.+++...-+  .......+..|+... ..+.+.+.+.... .+|.+|.
T Consensus        74 -~aDvVvi~ag~~~~~--g~~r~dl~~~n~~i~-~~i~~~i~~~~p~a~viv~tN  124 (317)
T 3d0o_A           74 -DADLVVICAGAAQKP--GETRLDLVSKNLKIF-KSIVGEVMASKFDGIFLVATN  124 (317)
T ss_dssp             -TCSEEEECCCCCCCT--TCCHHHHHHHHHHHH-HHHHHHHHHTTCCSEEEECSS
T ss_pred             -CCCEEEECCCCCCCC--CCcHHHHHHHHHHHH-HHHHHHHHHhCCCcEEEEecC
Confidence             899999999864221  123344556665544 3666666655433 5555544

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.26  E-value=0.0003  Score=60.21  Aligned_cols=119  Identities=16%  Similarity=0.146  Sum_probs=64.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceE--EEeeCCCcccHHHHHHHhCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVF--FDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      +|||.|+|| |.+|+.++..|...|+  .+|.+.+++++..+.....+......  ....+.-..++++.++   ++|+|
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~--~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~---~aDiV   82 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALREL--ADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALT---GADCV   82 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHT---TCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhC---CCCEE
Confidence            368999997 9999999999999993  28999999876655421111000000  0011100123444455   89999


Q ss_pred             EECCCccCccccc---cCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           81 VNCAALSVPRVCE---NDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        81 ih~a~~~~~~~~~---~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      |-+++.......+   .........|+... ..+.+.+.+.... .+|..|.
T Consensus        83 i~a~g~p~~~g~~~~~~~r~dl~~~n~~i~-~~i~~~i~~~~p~a~vi~~tN  133 (331)
T 1pzg_A           83 IVTAGLTKVPGKPDSEWSRNDLLPFNSKII-REIGQNIKKYCPKTFIIVVTN  133 (331)
T ss_dssp             EECCSCSSCTTCCGGGCCGGGGHHHHHHHH-HHHHHHHHHHCTTCEEEECCS
T ss_pred             EEccCCCCCCCcccCCCCHHHHHHHHHHHH-HHHHHHHHHHCCCcEEEEEcC
Confidence            9999753211100   02233344444433 3666666655433 3444433

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.22  E-value=0.00028  Score=60.45  Aligned_cols=117  Identities=15%  Similarity=0.124  Sum_probs=69.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccC----CCceEEEecCCCCCh--hh----hhh-hCCCcceEEEeeCCCcccHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEG----KPYDVAATHHSTPLP--QL----LLD-ALPHSFVFFDVDLKSGSGFDA   69 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~----~v~~v~~~~r~~~~~--~~----~~~-~~~~~~~~~~~Dl~d~~~~~~   69 (320)
                      |+..||.|+||+|.||+.|+-.|.....    ...++.+++..+...  +.    +.. ..+.....+..   +  ...+
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~---~--~~~~   96 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT---A--DPRV   96 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE---S--CHHH
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc---C--ChHH
Confidence            4455999999999999999987765431    113677777654321  11    111 11111111111   1  1233


Q ss_pred             HHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-C-ceEEEeec
Q 020880           70 VALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-E-NLLIHLST  128 (320)
Q Consensus        70 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~-~~~v~~Ss  128 (320)
                      .++   ++|+||-+||...-  ..+...+.++.|..-. ..+.+.+.+.. . -+++.+|.
T Consensus        97 a~~---~advVvi~aG~prk--pGmtR~DLl~~Na~I~-~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           97 AFD---GVAIAIMCGAFPRK--AGMERKDLLEMNARIF-KEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             HTT---TCSEEEECCCCCCC--TTCCHHHHHHHHHHHH-HHHHHHHHHHSCTTCEEEECSS
T ss_pred             HhC---CCCEEEECCCCCCC--CCCCHHHHHHHhHHHH-HHHHHHHHhhccCceEEEEeCC
Confidence            444   99999999997532  2345678888887665 36777776543 1 25666765

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.21  E-value=0.00037  Score=58.11  Aligned_cols=71  Identities=15%  Similarity=0.260  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCC--cceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPH--SFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      ..++++|+|+ |-+|+.++..|.+.|   . +|+...|+.++.+.+.+.+..  .+..  .++.+   +   .   .++|
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G---~~~v~v~~R~~~~a~~la~~~~~~~~~~~--~~~~~---l---~---~~aD  189 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQ---PASITVTNRTFAKAEQLAELVAAYGEVKA--QAFEQ---L---K---QSYD  189 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTC---CSEEEEEESSHHHHHHHHHHHGGGSCEEE--EEGGG---C---C---SCEE
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcC---CCeEEEEECCHHHHHHHHHHhhccCCeeE--eeHHH---h---c---CCCC
Confidence            3689999996 789999999999999   5 888999988777666554432  1222  22222   1   1   2789


Q ss_pred             EEEECCCcc
Q 020880           79 VVVNCAALS   87 (320)
Q Consensus        79 ~Vih~a~~~   87 (320)
                      +||++....
T Consensus       190 iIInaTp~g  198 (281)
T 3o8q_A          190 VIINSTSAS  198 (281)
T ss_dssp             EEEECSCCC
T ss_pred             EEEEcCcCC
Confidence            999987653

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.21  E-value=0.00025  Score=62.58  Aligned_cols=74  Identities=18%  Similarity=0.188  Sum_probs=58.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +++|+|.| .|-+|+.+++.|.+.|   ++|+++.++++....+..   .++.++.+|.++++.+.++  .+.++|+||-
T Consensus         4 ~~~viIiG-~Gr~G~~va~~L~~~g---~~vvvId~d~~~v~~~~~---~g~~vi~GDat~~~~L~~a--gi~~A~~viv   74 (413)
T 3l9w_A            4 GMRVIIAG-FGRFGQITGRLLLSSG---VKMVVLDHDPDHIETLRK---FGMKVFYGDATRMDLLESA--GAAKAEVLIN   74 (413)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTT---CCEEEEECCHHHHHHHHH---TTCCCEESCTTCHHHHHHT--TTTTCSEEEE
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHh---CCCeEEEcCCCCHHHHHhc--CCCccCEEEE
Confidence            46799999 4999999999999999   889999999776655543   2466799999999877665  1238899997


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +..
T Consensus        75 ~~~   77 (413)
T 3l9w_A           75 AID   77 (413)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            754

>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O

Probab=97.18  E-value=0.0032  Score=53.82  Aligned_cols=35  Identities=20%  Similarity=0.286  Sum_probs=28.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH   38 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r   38 (320)
                      ||++||.|.|+ |.||+.+++.|.+...  ++|+++.-
T Consensus         1 mm~ikVgI~G~-GrIGr~l~R~l~~~p~--vevvaI~d   35 (337)
T 3e5r_O            1 MGKIKIGINGF-GRIGRLVARVALQSED--VELVAVND   35 (337)
T ss_dssp             -CCEEEEEECC-SHHHHHHHHHHHTCSS--EEEEEEEC
T ss_pred             CCceEEEEECc-CHHHHHHHHHHhCCCC--eEEEEEEC
Confidence            65579999999 9999999999987632  78877654

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.18  E-value=0.00058  Score=58.87  Aligned_cols=96  Identities=20%  Similarity=0.057  Sum_probs=62.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +++|||+||+|-||...++.+...|   .+|+++ +++++.+.. ..++  ...  .| .+.+....+.+..  .++|+|
T Consensus       151 g~~VlV~Ga~g~iG~~~~q~a~~~G---a~Vi~~-~~~~~~~~~-~~lG--a~~--i~-~~~~~~~~~~~~~~~~g~D~v  220 (343)
T 3gaz_A          151 GQTVLIQGGGGGVGHVAIQIALARG---ARVFAT-ARGSDLEYV-RDLG--ATP--ID-ASREPEDYAAEHTAGQGFDLV  220 (343)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEE-ECHHHHHHH-HHHT--SEE--EE-TTSCHHHHHHHHHTTSCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCC---CEEEEE-eCHHHHHHH-HHcC--CCE--ec-cCCCHHHHHHHHhcCCCceEE
Confidence            5789999999999999999999999   888888 665544333 3333  222  45 4433223332222  269999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      |+++|..           .        +...++.++..|  ++|.++..
T Consensus       221 id~~g~~-----------~--------~~~~~~~l~~~G--~iv~~g~~  248 (343)
T 3gaz_A          221 YDTLGGP-----------V--------LDASFSAVKRFG--HVVSCLGW  248 (343)
T ss_dssp             EESSCTH-----------H--------HHHHHHHEEEEE--EEEESCCC
T ss_pred             EECCCcH-----------H--------HHHHHHHHhcCC--eEEEEccc
Confidence            9998721           0        135566666666  78877654

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.15  E-value=0.0017  Score=54.89  Aligned_cols=111  Identities=15%  Similarity=0.153  Sum_probs=68.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-------CCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-------PHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      |||.|+|+ |.+|+.++..|+..|.- .+|.+.++++++.+.....+       ..... +.+. .+.+    .++   +
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~-~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~-v~~~-~~~~----a~~---~   69 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVA-KEVVMVDIKDGMPQGKALDMRESSPIHGFDTR-VTGT-NDYG----PTE---D   69 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCS-SEEEEECSSTTHHHHHHHHHHHHHHHHTCCCE-EEEE-SSSG----GGT---T
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCC-CEEEEEeCchHHHHHHHHHHhccccccCCCcE-EEEC-CCHH----HhC---C
Confidence            58999996 99999999999988831 38999999887654221111       11222 2221 2222    233   8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      +|+||-+||....+  ..+....+..|+.-. ..+.+.+.+.... .++.+|.
T Consensus        70 aDvVii~ag~~~kp--G~~R~dl~~~N~~i~-~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           70 SDVCIITAGLPRSP--GMSRDDLLAKNTEIV-GGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             CSEEEECCCC---------CHHHHHHHHHHH-HHHHHHHHTTCTTCEEEECCS
T ss_pred             CCEEEECCCCCCCC--CCCHHHHHHhhHHHH-HHHHHHHHHhCCCcEEEecCC
Confidence            99999999864222  234566777787655 3777777665432 5666665

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.14  E-value=0.0011  Score=56.26  Aligned_cols=110  Identities=17%  Similarity=0.155  Sum_probs=68.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCC--CChhhhhhhC-------CCcceEEEeeCCCcccHHHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHST--PLPQLLLDAL-------PHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~--~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      ++||.|+|+ |.+|+.++..|...|   + +|++.++++  ++.+.....+       ..... +.+. .|.+    .++
T Consensus         8 ~~kv~ViGa-G~vG~~ia~~l~~~g---~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~-i~~t-~d~~----a~~   77 (315)
T 3tl2_A            8 RKKVSVIGA-GFTGATTAFLLAQKE---LADVVLVDIPQLENPTKGKALDMLEASPVQGFDAN-IIGT-SDYA----DTA   77 (315)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT---CCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCC-EEEE-SCGG----GGT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC---CCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCE-EEEc-CCHH----HhC
Confidence            469999996 999999999999999   6 899988873  3322211111       01111 1211 1222    233


Q ss_pred             HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           73 KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                         ++|+||-+||....+  .......+..|+... ..+.+.+.+.... .++.+|.
T Consensus        78 ---~aDvVIiaag~p~kp--g~~R~dl~~~N~~i~-~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           78 ---DSDVVVITAGIARKP--GMSRDDLVATNSKIM-KSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             ---TCSEEEECCSCCCCT--TCCHHHHHHHHHHHH-HHHHHHHHHHCTTCEEEECCS
T ss_pred             ---CCCEEEEeCCCCCCC--CCCHHHHHHHHHHHH-HHHHHHHHHhCCCeEEEECCC
Confidence               899999999864322  234567777787655 3777777665433 5666665

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.12  E-value=0.001  Score=57.62  Aligned_cols=97  Identities=18%  Similarity=0.101  Sum_probs=64.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ..+|||+|+ |-||...++.+...|   .+|+++.+++++.+...+.++..   ...|..+.+.+.++.   +++|+||+
T Consensus       181 g~~VlV~Ga-G~vG~~a~qlak~~G---a~Vi~~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~~~---~g~D~vid  250 (357)
T 2cf5_A          181 GLRGGILGL-GGVGHMGVKIAKAMG---HHVTVISSSNKKREEALQDLGAD---DYVIGSDQAKMSELA---DSLDYVID  250 (357)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHT---CEEEEEESSTTHHHHHHTTSCCS---CEEETTCHHHHHHST---TTEEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEeCChHHHHHHHHHcCCc---eeeccccHHHHHHhc---CCCCEEEE
Confidence            468999995 999999999999899   88999999877655544344322   123555543333322   37999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      ++|....                  +...++.++..|  +++.++..
T Consensus       251 ~~g~~~~------------------~~~~~~~l~~~G--~iv~~G~~  277 (357)
T 2cf5_A          251 TVPVHHA------------------LEPYLSLLKLDG--KLILMGVI  277 (357)
T ss_dssp             CCCSCCC------------------SHHHHTTEEEEE--EEEECSCC
T ss_pred             CCCChHH------------------HHHHHHHhccCC--EEEEeCCC
Confidence            9874210                  125555666655  78887653

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.11  E-value=0.00083  Score=58.08  Aligned_cols=70  Identities=14%  Similarity=0.200  Sum_probs=50.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+|.|.| .|.+|+.++..|++.|   ++|.+..|++++.+.+.+.   ++       ....++.++++....+|+||
T Consensus        21 ~~mkIgiIG-lG~mG~~~A~~L~~~G---~~V~v~dr~~~~~~~l~~~---g~-------~~~~s~~e~~~~a~~~DvVi   86 (358)
T 4e21_A           21 QSMQIGMIG-LGRMGADMVRRLRKGG---HECVVYDLNVNAVQALERE---GI-------AGARSIEEFCAKLVKPRVVW   86 (358)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHTT---TC-------BCCSSHHHHHHHSCSSCEEE
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHC---CC-------EEeCCHHHHHhcCCCCCEEE
Confidence            368999999 8999999999999999   8999999987766655442   11       12234566666434559999


Q ss_pred             ECCC
Q 020880           82 NCAA   85 (320)
Q Consensus        82 h~a~   85 (320)
                      -+..
T Consensus        87 ~~vp   90 (358)
T 4e21_A           87 LMVP   90 (358)
T ss_dssp             ECSC
T ss_pred             EeCC
Confidence            8753

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=97.10  E-value=0.001  Score=57.00  Aligned_cols=99  Identities=16%  Similarity=0.054  Sum_probs=58.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ++||.|.||||++|+.|++.|.++.+...++..+....+..+.+.  +.. .....-++.. +.    ++   ++|+||-
T Consensus         1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~--~~~-~~~~~~~~~~-~~----~~---~~Dvvf~   69 (344)
T 3tz6_A            1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA--FRG-QEIEVEDAET-AD----PS---GLDIALF   69 (344)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE--ETT-EEEEEEETTT-SC----CT---TCSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee--ecC-CceEEEeCCH-HH----hc---cCCEEEE
Confidence            368999999999999999988876433255665543322221111  111 1112223322 22    22   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      |++...   +                ...+..+.+.|+ ++|=.|+..-+
T Consensus        70 a~~~~~---s----------------~~~a~~~~~~G~-~vID~Sa~~R~   99 (344)
T 3tz6_A           70 SAGSAM---S----------------KVQAPRFAAAGV-TVIDNSSAWRK   99 (344)
T ss_dssp             CSCHHH---H----------------HHHHHHHHHTTC-EEEECSSTTTT
T ss_pred             CCChHH---H----------------HHHHHHHHhCCC-EEEECCCcccc
Confidence            876321   0                256666667787 78888886533

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.07  E-value=0.0012  Score=56.36  Aligned_cols=113  Identities=13%  Similarity=0.040  Sum_probs=72.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh------CCCcceEEEeeCCCcccHHHHHHHhC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA------LPHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      .++||.|+|+ |.+|+.++..|+.+|.. .++.+.+++.++++.....      +......+..  .|.+    .++   
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~-~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~----~~~---   86 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLA-DELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS----VTA---   86 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCC-SEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG----GGT---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCC-ceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH----HhC---
Confidence            4679999997 99999999999998832 3888888876544432211      1111121211  2322    233   


Q ss_pred             CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      ++|+||.+||....  ..+...+.++.|..-. ..+.+.+.+.... .++.+|.
T Consensus        87 ~aDiVvi~aG~~~k--pG~tR~dL~~~N~~I~-~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           87 NSKLVIITAGARQQ--EGESRLNLVQRNVNIF-KFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             TEEEEEECCSCCCC--TTCCGGGGHHHHHHHH-HHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCEEEEccCCCCC--CCccHHHHHHHHHHHH-HHHHHHHHHHCCCeEEEEecC
Confidence            89999999986432  2345667788887665 3777777766432 6666665

>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*

Probab=97.07  E-value=0.0028  Score=56.65  Aligned_cols=75  Identities=15%  Similarity=0.132  Sum_probs=49.3

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEe-------eCCCcccHHHHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV-------DLKSGSGFDAVALK   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~   73 (320)
                      |+|+||||+| .|.+|..+++.+.+.|   ++++++....+........ .+  +.+..       +..|.+.+.++++.
T Consensus         4 m~~~kiLI~g-~g~~a~~i~~aa~~~G---~~~v~v~~~~~~~~~~~~~-ad--~~~~i~~~~~~~~~~d~~~l~~~~~~   76 (446)
T 3ouz_A            4 MEIKSILIAN-RGEIALRALRTIKEMG---KKAICVYSEADKDALYLKY-AD--ASICIGKARSSESYLNIPAIIAAAEI   76 (446)
T ss_dssp             TCCCEEEECC-CHHHHHHHHHHHHHTT---CEEEEEEEGGGTTCTHHHH-SS--EEEEEECCTTTTGGGCHHHHHHHHHH
T ss_pred             cccceEEEEC-CCHHHHHHHHHHHHcC---CEEEEEEcCcccccchHhh-CC--EEEEcCCCCccccccCHHHHHHHHHH
Confidence            7789999999 6889999999999999   7877775432211111111 11  11222       56666677777765


Q ss_pred             hCCCCEEEEC
Q 020880           74 FGQPDVVVNC   83 (320)
Q Consensus        74 ~~~~d~Vih~   83 (320)
                      . ++|+|+-.
T Consensus        77 ~-~~d~i~p~   85 (446)
T 3ouz_A           77 A-EADAIFPG   85 (446)
T ss_dssp             H-TCSEEECC
T ss_pred             h-CcCEEEEC
Confidence            4 89988754

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.07  E-value=0.00047  Score=61.73  Aligned_cols=41  Identities=22%  Similarity=0.103  Sum_probs=34.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL   46 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~   46 (320)
                      +++|||+||+|-||...++.+...|   .+|+++.+++++.+..
T Consensus       221 g~~VlV~GasG~iG~~a~qla~~~G---a~vi~~~~~~~~~~~~  261 (447)
T 4a0s_A          221 GDIVLIWGASGGLGSYAIQFVKNGG---GIPVAVVSSAQKEAAV  261 (447)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHH
Confidence            5789999999999999999999999   8888888876554443

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.06  E-value=0.0013  Score=56.16  Aligned_cols=95  Identities=18%  Similarity=0.071  Sum_probs=60.9

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEEEE
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVVVN   82 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~Vih   82 (320)
                      +|||+||+|-||...++.+...|   .+|+++++++++.+...+ ++.  . ...|..+.+  .+..+..  .++|+||+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~~~~~~~~~~~-lGa--~-~~i~~~~~~--~~~~~~~~~~~~d~vid  222 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRG---YTVEASTGKAAEHDYLRV-LGA--K-EVLAREDVM--AERIRPLDKQRWAAAVD  222 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCTTCHHHHHH-TTC--S-EEEECC-----------CCSCCEEEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHH-cCC--c-EEEecCCcH--HHHHHHhcCCcccEEEE
Confidence            79999999999999999999999   789999998776655433 432  1 223554432  1122211  26899999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      ++|..  .                 +...++.++..|  +++.++..
T Consensus       223 ~~g~~--~-----------------~~~~~~~l~~~G--~~v~~G~~  248 (328)
T 1xa0_A          223 PVGGR--T-----------------LATVLSRMRYGG--AVAVSGLT  248 (328)
T ss_dssp             CSTTT--T-----------------HHHHHHTEEEEE--EEEECSCC
T ss_pred             CCcHH--H-----------------HHHHHHhhccCC--EEEEEeec
Confidence            98731  0                 125566666666  78877643

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.05  E-value=0.00023  Score=59.71  Aligned_cols=111  Identities=14%  Similarity=0.018  Sum_probs=70.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhh----hhhh---CCCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL----LLDA---LPHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~----~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      |||.|+|| |.+|+.++..|..+|+. .+|.+.+++++..+.    +...   ++.... +.+. +|.+    .++   +
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~-~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~-i~~t-~d~~----a~~---~   69 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDV-DEIALVDIAEDLAVGEAMDLAHAAAGIDKYPK-IVGG-ADYS----LLK---G   69 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCC-SEEEEECSSHHHHHHHHHHHHHHHHTTTCCCE-EEEE-SCGG----GGT---T
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCC-CeEEEEECChHHHHHHHHHHHhhhhhcCCCCE-EEEe-CCHH----HhC---C
Confidence            58999998 99999999999998831 289999998765431    1111   122222 2221 1222    344   8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      +|+||.+||....  ........+..|+.-. ..+.+.+.+.... .+|.+|.
T Consensus        70 aDiVViaag~~~k--pG~~R~dl~~~N~~i~-~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           70 SEIIVVTAGLARK--PGMTRLDLAHKNAGII-KDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             CSEEEECCCCCCC--SSCCHHHHHHHHHHHH-HHHHHHHHTTSTTCEEEECSS
T ss_pred             CCEEEECCCCCCC--CCCcHHHHHHHHHHHH-HHHHHHHHhhCCCeEEEEeCC
Confidence            9999999986422  1234556677776554 3777777776532 5666665

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=97.05  E-value=0.00077  Score=57.62  Aligned_cols=95  Identities=19%  Similarity=0.141  Sum_probs=54.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |||.|.||||++|+.+++.|.++++.+.++..+.........+. -.+..+.  ..+. +++.       + ++|+||-|
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~-~~g~~i~--v~~~-~~~~-------~-~~DvV~~a   68 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLA-FRGEEIP--VEPL-PEGP-------L-PVDLVLAS   68 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEE-ETTEEEE--EEEC-CSSC-------C-CCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEE-EcCceEE--EEeC-Chhh-------c-CCCEEEEC
Confidence            47999999999999999999988766544443321111100000 0001111  1122 2221       2 68999998


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      .+....                   ...+..+.+.|+ ++|-.|+..
T Consensus        69 ~g~~~s-------------------~~~a~~~~~~G~-~vId~s~~~   95 (331)
T 2yv3_A           69 AGGGIS-------------------RAKALVWAEGGA-LVVDNSSAW   95 (331)
T ss_dssp             SHHHHH-------------------HHHHHHHHHTTC-EEEECSSSS
T ss_pred             CCccch-------------------HHHHHHHHHCCC-EEEECCCcc
Confidence            764210                   245555566777 788888874

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.05  E-value=0.0011  Score=57.57  Aligned_cols=73  Identities=19%  Similarity=0.354  Sum_probs=50.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC---CChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST---PLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      +++|||+|| |-||..+++.+...|   .+|+++.+++   ++.+. ...++  ...+  | .+ +..+.+.+.-.++|+
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~G---a~Vi~~~~~~~~~~~~~~-~~~~g--a~~v--~-~~-~~~~~~~~~~~~~d~  249 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYG---LEVWMANRREPTEVEQTV-IEETK--TNYY--N-SS-NGYDKLKDSVGKFDV  249 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHT---CEEEEEESSCCCHHHHHH-HHHHT--CEEE--E-CT-TCSHHHHHHHCCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCccchHHHHH-HHHhC--Ccee--c-hH-HHHHHHHHhCCCCCE
Confidence            689999999 999999999999999   8999999987   44432 22332  2333  6 55 333333221147999


Q ss_pred             EEECCCc
Q 020880           80 VVNCAAL   86 (320)
Q Consensus        80 Vih~a~~   86 (320)
                      ||+++|.
T Consensus       250 vid~~g~  256 (366)
T 2cdc_A          250 IIDATGA  256 (366)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*

Probab=97.04  E-value=0.0053  Score=52.62  Aligned_cols=34  Identities=21%  Similarity=0.239  Sum_probs=27.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH   38 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r   38 (320)
                      +|+||.|.|+ |+||+.+++.|.+...  ++|+++.-
T Consensus        16 ~~ikVgI~G~-G~iGr~llR~l~~~p~--veivaind   49 (354)
T 3cps_A           16 FQGTLGINGF-GRIGRLVLRACMERND--ITVVAIND   49 (354)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHTCSS--CEEEEEEC
T ss_pred             cceEEEEECC-CHHHHHHHHHHHcCCC--eEEEEecC
Confidence            4679999999 9999999999987633  78877664

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.03  E-value=0.00059  Score=59.21  Aligned_cols=74  Identities=11%  Similarity=0.193  Sum_probs=53.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++|+|+|+ |-+|+.+++.|...|   .+|++..|++++.+.+.+.....+.   ....+.+.+.+.+.   ++|+||+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~G---a~V~v~dr~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~DvVI~  236 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLG---AQVQIFDINVERLSYLETLFGSRVE---LLYSNSAEIETAVA---EADLLIG  236 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHGGGSE---EEECCHHHHHHHHH---TCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHhhCceeE---eeeCCHHHHHHHHc---CCCEEEE
Confidence            479999998 999999999999999   7899999987665554433222221   12223344555555   8999999


Q ss_pred             CCCc
Q 020880           83 CAAL   86 (320)
Q Consensus        83 ~a~~   86 (320)
                      +++.
T Consensus       237 ~~~~  240 (361)
T 1pjc_A          237 AVLV  240 (361)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9875

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.03  E-value=0.00061  Score=57.12  Aligned_cols=65  Identities=23%  Similarity=0.293  Sum_probs=47.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||+|.|.|+||.+|+.+++.|.+.|   ++|++..|+++..+.+.+ .+  +.     ..+.   .+.++   ++|+||-
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g---~~V~~~~r~~~~~~~~~~-~g--~~-----~~~~---~~~~~---~aDvVi~   73 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSA---HHLAAIEIAPEGRDRLQG-MG--IP-----LTDG---DGWID---EADVVVL   73 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSS---SEEEEECCSHHHHHHHHH-TT--CC-----CCCS---SGGGG---TCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHh-cC--CC-----cCCH---HHHhc---CCCEEEE
Confidence            4799999999999999999999999   889988888665554433 21  21     1222   22344   7999998


Q ss_pred             CC
Q 020880           83 CA   84 (320)
Q Consensus        83 ~a   84 (320)
                      +.
T Consensus        74 av   75 (286)
T 3c24_A           74 AL   75 (286)
T ss_dssp             CS
T ss_pred             cC
Confidence            75

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.03  E-value=0.00049  Score=57.22  Aligned_cols=74  Identities=16%  Similarity=0.235  Sum_probs=50.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+++++|+|+ |-+|+.++..|++.|   .+|+...|+.++.+.+.+.++........|+   +.+.   +  +++|+||
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G---~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~---~~~~---~--~~~DivI  185 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQ---QNIVLANRTFSKTKELAERFQPYGNIQAVSM---DSIP---L--QTYDLVI  185 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTT---CEEEEEESSHHHHHHHHHHHGGGSCEEEEEG---GGCC---C--SCCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHccccCCeEEeeH---HHhc---c--CCCCEEE
Confidence            3689999997 779999999999999   7899999997776666544321001112233   1111   1  2799999


Q ss_pred             ECCCcc
Q 020880           82 NCAALS   87 (320)
Q Consensus        82 h~a~~~   87 (320)
                      ++++..
T Consensus       186 n~t~~~  191 (272)
T 1p77_A          186 NATSAG  191 (272)
T ss_dssp             ECCCC-
T ss_pred             ECCCCC
Confidence            998864

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.03  E-value=0.0017  Score=56.35  Aligned_cols=101  Identities=13%  Similarity=0.117  Sum_probs=64.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCce-EEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh---CCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYD-VAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF---GQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~~d   78 (320)
                      +.+|||+|+ |-+|...++.+...|   .+ |+++.+++++.+...+. ...+..+..|-.+.+++.+.+...   .++|
T Consensus       180 g~~VlV~Ga-G~vG~~aiqlak~~G---a~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~D  254 (363)
T 3m6i_A          180 GDPVLICGA-GPIGLITMLCAKAAG---ACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPA  254 (363)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTT---CCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC---CCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCCCC
Confidence            568999998 999999999999999   65 88888876665544433 322222333433344444444332   2699


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      +||.++|..          ..        +...++.++..|  +++.++.
T Consensus       255 vvid~~g~~----------~~--------~~~~~~~l~~~G--~iv~~G~  284 (363)
T 3m6i_A          255 VALECTGVE----------SS--------IAAAIWAVKFGG--KVFVIGV  284 (363)
T ss_dssp             EEEECSCCH----------HH--------HHHHHHHSCTTC--EEEECCC
T ss_pred             EEEECCCCh----------HH--------HHHHHHHhcCCC--EEEEEcc
Confidence            999998731          00        135566666666  8888764

>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1

Probab=97.03  E-value=0.0019  Score=55.19  Aligned_cols=35  Identities=26%  Similarity=0.289  Sum_probs=27.2

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH   38 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r   38 (320)
                      |||.||.|.|+ |.||+.+++.|.+...  .+|+++.-
T Consensus         1 mM~ikVgI~G~-G~iGr~~~R~l~~~~~--vevvaI~d   35 (335)
T 1u8f_O            1 MGKVKVGVNGF-GRIGRLVTRAAFNSGK--VDIVAIND   35 (335)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHHCS--SEEEEEEC
T ss_pred             CCceEEEEEcc-CHHHHHHHHHHHcCCC--cEEEEecC
Confidence            66679999996 9999999999987643  78777654

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.03  E-value=0.0019  Score=55.83  Aligned_cols=98  Identities=13%  Similarity=0.170  Sum_probs=63.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCC-cccHHHHHHHh-----CC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS-GSGFDAVALKF-----GQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~-----~~   76 (320)
                      +.+|||+|+ |-||...++.+...|   .+|+++.+++++.+.. ..++..   ...|..+ .+...++.+..     .+
T Consensus       169 g~~VlV~Ga-G~vG~~a~qla~~~G---a~Vi~~~~~~~~~~~~-~~lGa~---~~~~~~~~~~~~~~i~~~~~~~~g~g  240 (352)
T 1e3j_A          169 GTTVLVIGA-GPIGLVSVLAAKAYG---AFVVCTARSPRRLEVA-KNCGAD---VTLVVDPAKEEESSIIERIRSAIGDL  240 (352)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHHHHHHH-HHTTCS---EEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC---CEEEEEcCCHHHHHHH-HHhCCC---EEEcCcccccHHHHHHHHhccccCCC
Confidence            578999997 999999999998899   7888888876554433 333322   2345554 44344433322     26


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      +|+||+++|..         . .        +...++.++..|  ++|.++.
T Consensus       241 ~D~vid~~g~~---------~-~--------~~~~~~~l~~~G--~iv~~G~  272 (352)
T 1e3j_A          241 PNVTIDCSGNE---------K-C--------ITIGINITRTGG--TLMLVGM  272 (352)
T ss_dssp             CSEEEECSCCH---------H-H--------HHHHHHHSCTTC--EEEECSC
T ss_pred             CCEEEECCCCH---------H-H--------HHHHHHHHhcCC--EEEEEec
Confidence            99999998731         0 0        125566666666  8888764

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=97.02  E-value=0.0017  Score=55.67  Aligned_cols=98  Identities=19%  Similarity=0.202  Sum_probs=57.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |.||.|.||||++|+.|++.|.+...  .++..+....+..+...+.++ .+. ....+.+. +..++.+   ++|+||-
T Consensus        13 ~~~V~IvGAtG~vG~ellrlL~~hP~--~el~~l~S~~~aG~~~~~~~p-~~~-~~l~~~~~-~~~~~~~---~~Dvvf~   84 (351)
T 1vkn_A           13 MIRAGIIGATGYTGLELVRLLKNHPE--AKITYLSSRTYAGKKLEEIFP-STL-ENSILSEF-DPEKVSK---NCDVLFT   84 (351)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTT--EEEEEEECSTTTTSBHHHHCG-GGC-CCCBCBCC-CHHHHHH---HCSEEEE
T ss_pred             eeEEEEECCCCHHHHHHHHHHHcCCC--cEEEEEeCcccccCChHHhCh-hhc-cCceEEeC-CHHHhhc---CCCEEEE
Confidence            56999999999999999999987643  677766544333333332221 111 11112221 1223334   7899998


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      +++...   +                ..++..+  .|+ ++|=.||..
T Consensus        85 alp~~~---s----------------~~~~~~~--~g~-~VIDlSsdf  110 (351)
T 1vkn_A           85 ALPAGA---S----------------YDLVREL--KGV-KIIDLGADF  110 (351)
T ss_dssp             CCSTTH---H----------------HHHHTTC--CSC-EEEESSSTT
T ss_pred             CCCcHH---H----------------HHHHHHh--CCC-EEEECChhh
Confidence            865320   0                2455555  465 788888754

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.01  E-value=0.00047  Score=59.28  Aligned_cols=70  Identities=14%  Similarity=0.104  Sum_probs=56.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      ++++|.|+ |-+|+.+++.|.++|   + |++..++++..+ +.+   .++.++.+|.+|++.+.++-  +.++|.|+-+
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g---~-v~vid~~~~~~~-~~~---~~~~~i~gd~~~~~~L~~a~--i~~a~~vi~~  184 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSE---V-FVLAEDENVRKK-VLR---SGANFVHGDPTRVSDLEKAN--VRGARAVIVD  184 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSC---E-EEEESCGGGHHH-HHH---TTCEEEESCTTSHHHHHHTC--STTEEEEEEC
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCC---c-EEEEeCChhhhh-HHh---CCcEEEEeCCCCHHHHHhcC--hhhccEEEEc
Confidence            48999995 999999999999999   8 888888876665 332   35788999999998876651  2378999876


Q ss_pred             C
Q 020880           84 A   84 (320)
Q Consensus        84 a   84 (320)
                      .
T Consensus       185 ~  185 (336)
T 1lnq_A          185 L  185 (336)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.01  E-value=0.0021  Score=53.74  Aligned_cols=111  Identities=12%  Similarity=-0.030  Sum_probs=71.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh-------CCCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA-------LPHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      |||.|+|| |.||+.++-.|+.++.. -++.+.+..+++.+.....       .+........  .|.+.    ++   +
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~-~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~~----~~---~   69 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDV-DEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL----LK---G   69 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCC-SEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGGG----GT---T
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCC-CEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHHH----hC---C
Confidence            68999995 99999999999988753 5788888875443321111       1112221211  12221    33   8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      +|+||-.||...-  ...+..+.++.|..-. ..+.+.+.+...+ .++.+|.
T Consensus        70 aDvVvitAG~prk--pGmtR~dLl~~Na~I~-~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           70 SEIIVVTAGLARK--PGMTRLDLAHKNAGII-KDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             CSEEEECCCCCCC--SSSCHHHHHHHHHHHH-HHHHHHHHTTSTTCEEEECSS
T ss_pred             CCEEEEecCCCCC--CCCchHHHHHHHHHHH-HHHHHHHHhcCCceEEEEecC
Confidence            9999999996532  2346778888898765 4788888776644 4555555

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.01  E-value=0.00042  Score=58.83  Aligned_cols=44  Identities=16%  Similarity=0.176  Sum_probs=35.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD   48 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~   48 (320)
                      |+||+|.|.| .|.+|+.++..|.+.|   ++|++..|+++..+.+.+
T Consensus         1 ~~~m~i~iiG-~G~~G~~~a~~l~~~g---~~V~~~~r~~~~~~~~~~   44 (316)
T 2ew2_A            1 SNAMKIAIAG-AGAMGSRLGIMLHQGG---NDVTLIDQWPAHIEAIRK   44 (316)
T ss_dssp             ---CEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHH
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHhCC---CcEEEEECCHHHHHHHHh
Confidence            5678999999 5999999999999999   889999998766555443

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.01  E-value=0.0015  Score=56.75  Aligned_cols=97  Identities=19%  Similarity=0.103  Sum_probs=64.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH-hC--CCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK-FG--QPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~--~~d~   79 (320)
                      +.+|||+| +|-||...++.+...|   .+|+++++++++.+.. ..++.  . ...| .+.+++.+.+.. .+  ++|+
T Consensus       190 g~~VlV~G-~G~vG~~a~qla~~~G---a~Vi~~~~~~~~~~~~-~~lGa--~-~vi~-~~~~~~~~~v~~~~~g~g~D~  260 (363)
T 3uog_A          190 GDRVVVQG-TGGVALFGLQIAKATG---AEVIVTSSSREKLDRA-FALGA--D-HGIN-RLEEDWVERVYALTGDRGADH  260 (363)
T ss_dssp             TCEEEEES-SBHHHHHHHHHHHHTT---CEEEEEESCHHHHHHH-HHHTC--S-EEEE-TTTSCHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcC---CEEEEEecCchhHHHH-HHcCC--C-EEEc-CCcccHHHHHHHHhCCCCceE
Confidence            57899999 8999999999999999   8999999886655443 33332  2 2345 443334333322 22  7999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      ||+++|..  .                 +...++.++..|  +++.++..
T Consensus       261 vid~~g~~--~-----------------~~~~~~~l~~~G--~iv~~G~~  289 (363)
T 3uog_A          261 ILEIAGGA--G-----------------LGQSLKAVAPDG--RISVIGVL  289 (363)
T ss_dssp             EEEETTSS--C-----------------HHHHHHHEEEEE--EEEEECCC
T ss_pred             EEECCChH--H-----------------HHHHHHHhhcCC--EEEEEecC
Confidence            99998721  0                 135666666666  78888754

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.98  E-value=0.0014  Score=56.88  Aligned_cols=74  Identities=15%  Similarity=0.114  Sum_probs=52.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +.+|||+|+ |-||...++.+...|   .+|+++.+++++.+...+ ++.  . ...|..+..++.+.+.  +++|+||.
T Consensus       180 g~~VlV~Ga-G~vG~~~~qlak~~G---a~Vi~~~~~~~~~~~~~~-lGa--~-~v~~~~~~~~~~~~~~--~~~D~vid  249 (360)
T 1piw_A          180 GKKVGIVGL-GGIGSMGTLISKAMG---AETYVISRSSRKREDAMK-MGA--D-HYIATLEEGDWGEKYF--DTFDLIVV  249 (360)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHT---CEEEEEESSSTTHHHHHH-HTC--S-EEEEGGGTSCHHHHSC--SCEEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHH-cCC--C-EEEcCcCchHHHHHhh--cCCCEEEE
Confidence            568999999 999999999999899   889999998877655433 331  1 2345544412222222  37999999


Q ss_pred             CCCc
Q 020880           83 CAAL   86 (320)
Q Consensus        83 ~a~~   86 (320)
                      +++.
T Consensus       250 ~~g~  253 (360)
T 1piw_A          250 CASS  253 (360)
T ss_dssp             CCSC
T ss_pred             CCCC
Confidence            9874

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.98  E-value=0.00073  Score=56.68  Aligned_cols=76  Identities=9%  Similarity=0.195  Sum_probs=49.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCc---ceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      .+++++|||++ -+|+.++..|++.|    +|+...|+.++.+.+.+.+...   ...+.+|+.+.      .+.++++|
T Consensus       127 ~~k~vlV~GaG-giG~aia~~L~~~G----~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~------~~~~~~~D  195 (287)
T 1nvt_A          127 KDKNIVIYGAG-GAARAVAFELAKDN----NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL------DVDLDGVD  195 (287)
T ss_dssp             CSCEEEEECCS-HHHHHHHHHHTSSS----EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT------TCCCTTCC
T ss_pred             CCCEEEEECch-HHHHHHHHHHHHCC----CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH------HHhhCCCC
Confidence            46899999975 99999999999998    4677788766555554332110   00012344431      12224899


Q ss_pred             EEEECCCccC
Q 020880           79 VVVNCAALSV   88 (320)
Q Consensus        79 ~Vih~a~~~~   88 (320)
                      +|||+++...
T Consensus       196 ilVn~ag~~~  205 (287)
T 1nvt_A          196 IIINATPIGM  205 (287)
T ss_dssp             EEEECSCTTC
T ss_pred             EEEECCCCCC
Confidence            9999998754

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.96  E-value=0.0017  Score=55.84  Aligned_cols=98  Identities=16%  Similarity=0.109  Sum_probs=65.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +.+|||+|+ |-||...++.+...|   .+|+++.+++++.+.. ..++..   ...|..+.+..+.+.+..+++|+||.
T Consensus       167 g~~VlV~Ga-G~vG~~a~qla~~~G---a~Vi~~~~~~~~~~~~-~~lGa~---~~i~~~~~~~~~~~~~~~g~~d~vid  238 (340)
T 3s2e_A          167 GQWVVISGI-GGLGHVAVQYARAMG---LRVAAVDIDDAKLNLA-RRLGAE---VAVNARDTDPAAWLQKEIGGAHGVLV  238 (340)
T ss_dssp             TSEEEEECC-STTHHHHHHHHHHTT---CEEEEEESCHHHHHHH-HHTTCS---EEEETTTSCHHHHHHHHHSSEEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEeCCHHHHHHH-HHcCCC---EEEeCCCcCHHHHHHHhCCCCCEEEE
Confidence            568999997 889999999999999   8999998887655443 333322   23566665544444443357899999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      +++..         . .        +...++.++..|  +++.++.
T Consensus       239 ~~g~~---------~-~--------~~~~~~~l~~~G--~iv~~G~  264 (340)
T 3s2e_A          239 TAVSP---------K-A--------FSQAIGMVRRGG--TIALNGL  264 (340)
T ss_dssp             SSCCH---------H-H--------HHHHHHHEEEEE--EEEECSC
T ss_pred             eCCCH---------H-H--------HHHHHHHhccCC--EEEEeCC
Confidence            87621         0 0        135566666666  7887764

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.94  E-value=0.0024  Score=55.32  Aligned_cols=96  Identities=14%  Similarity=0.206  Sum_probs=63.1

Q ss_pred             cEEEEEcCCChhhHHH-HHHH-hhccCCCce-EEEecCCCC---ChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            4 KRVLVVGGTGYLGQHL-LQGL-SEIEGKPYD-VAATHHSTP---LPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         4 ~~ilItGatG~IG~~l-~~~L-~~~g~~v~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      .+|||+|| |-||... ++.+ ...|   .+ |++++++++   +.+.. ..++  ...+  |..+.+. .++.+.-+++
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~G---a~~Vi~~~~~~~~~~~~~~~-~~lG--a~~v--~~~~~~~-~~i~~~~gg~  243 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKG---YENLYCLGRRDRPDPTIDII-EELD--ATYV--DSRQTPV-EDVPDVYEQM  243 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTC---CCEEEEEECCCSSCHHHHHH-HHTT--CEEE--ETTTSCG-GGHHHHSCCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcC---CcEEEEEeCCcccHHHHHHH-HHcC--Cccc--CCCccCH-HHHHHhCCCC
Confidence            79999999 9999999 9888 7888   66 999999876   54443 3343  3333  7665432 2222211368


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      |+||+++|..         . .        +...++.++..|  +++.++..
T Consensus       244 Dvvid~~g~~---------~-~--------~~~~~~~l~~~G--~iv~~g~~  275 (357)
T 2b5w_A          244 DFIYEATGFP---------K-H--------AIQSVQALAPNG--VGALLGVP  275 (357)
T ss_dssp             EEEEECSCCH---------H-H--------HHHHHHHEEEEE--EEEECCCC
T ss_pred             CEEEECCCCh---------H-H--------HHHHHHHHhcCC--EEEEEeCC
Confidence            9999998731         0 0        135566666666  78887754

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.93  E-value=0.0008  Score=60.12  Aligned_cols=43  Identities=26%  Similarity=0.315  Sum_probs=36.3

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD   48 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~   48 (320)
                      |+ |||.|.| +|++|..++..|.+.|   ++|++.+|++++.+.+.+
T Consensus         1 M~-mkI~VIG-~G~vG~~lA~~La~~G---~~V~~~D~~~~~v~~l~~   43 (450)
T 3gg2_A            1 MS-LDIAVVG-IGYVGLVSATCFAELG---ANVRCIDTDRNKIEQLNS   43 (450)
T ss_dssp             -C-CEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHH
T ss_pred             CC-CEEEEEC-cCHHHHHHHHHHHhcC---CEEEEEECCHHHHHHHHc
Confidence            54 6899999 6999999999999999   899999999777665544

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.93  E-value=0.0013  Score=56.94  Aligned_cols=77  Identities=16%  Similarity=0.073  Sum_probs=49.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEE------eeCC-CcccHHHHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD------VDLK-SGSGFDAVALK   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~------~Dl~-d~~~~~~~~~~   73 (320)
                      |++|+|.|.| .|.+|+.++..|.+.|   ++|.+..|+++..+.+.+..+  +.+..      ..+. ...++.+++. 
T Consensus         2 m~~mki~iiG-~G~~G~~~a~~L~~~g---~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-   74 (359)
T 1bg6_A            2 IESKTYAVLG-LGNGGHAFAAYLALKG---QSVLAWDIDAQRIKEIQDRGA--IIAEGPGLAGTAHPDLLTSDIGLAVK-   74 (359)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHTS--EEEESSSCCEEECCSEEESCHHHHHT-
T ss_pred             CCcCeEEEEC-CCHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHhcCC--eEEeccccccccccceecCCHHHHHh-
Confidence            4467999999 5999999999999999   789999998766555544321  11100      0110 1123445454 


Q ss_pred             hCCCCEEEECCCc
Q 020880           74 FGQPDVVVNCAAL   86 (320)
Q Consensus        74 ~~~~d~Vih~a~~   86 (320)
                        ++|+||-+...
T Consensus        75 --~~D~vi~~v~~   85 (359)
T 1bg6_A           75 --DADVILIVVPA   85 (359)
T ss_dssp             --TCSEEEECSCG
T ss_pred             --cCCEEEEeCCc
Confidence              89999988653

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.91  E-value=0.0008  Score=57.32  Aligned_cols=72  Identities=17%  Similarity=0.166  Sum_probs=47.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-------CCcceEEEeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-------PHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      ++||.|+|| |.+|+.++..|...|+  .+|.+.++++++.+.....+       .....+...  +|   + +.++   
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~--~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~al~---   71 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNL--GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NT---Y-DDLA---   71 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CC---G-GGGT---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHhC---
Confidence            579999997 9999999999999983  27888888876554322211       111111110  22   2 2233   


Q ss_pred             CCCEEEECCCc
Q 020880           76 QPDVVVNCAAL   86 (320)
Q Consensus        76 ~~d~Vih~a~~   86 (320)
                      ++|+||-+++.
T Consensus        72 ~aD~Vi~a~g~   82 (322)
T 1t2d_A           72 GADVVIVTAGF   82 (322)
T ss_dssp             TCSEEEECCSC
T ss_pred             CCCEEEEeCCC
Confidence            89999999975

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.91  E-value=0.0011  Score=59.41  Aligned_cols=100  Identities=12%  Similarity=0.047  Sum_probs=63.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcc-------------cH--
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS-------------GF--   67 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~-------------~~--   67 (320)
                      +.+|+|+||+|-||...++.+...|   .+|+++++++++.+.. ..++.  . ...|..+.+             .+  
T Consensus       229 g~~VlV~GasG~vG~~avqlak~~G---a~vi~~~~~~~~~~~~-~~lGa--~-~vi~~~~~d~~~~~~~~~~~~~~~~~  301 (456)
T 3krt_A          229 GDNVLIWGASGGLGSYATQFALAGG---ANPICVVSSPQKAEIC-RAMGA--E-AIIDRNAEGYRFWKDENTQDPKEWKR  301 (456)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHH-HHHTC--C-EEEETTTTTCCSEEETTEECHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcC---CeEEEEECCHHHHHHH-HhhCC--c-EEEecCcCcccccccccccchHHHHH
Confidence            4689999999999999999999999   8888888876554443 33332  1 223433321             11  


Q ss_pred             --HHHHHHh--CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           68 --DAVALKF--GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        68 --~~~~~~~--~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                        +.+.+..  .++|+||+++|..           .        +...++.++..|  ++|.+++..
T Consensus       302 ~~~~i~~~t~g~g~Dvvid~~G~~-----------~--------~~~~~~~l~~~G--~iv~~G~~~  347 (456)
T 3krt_A          302 FGKRIRELTGGEDIDIVFEHPGRE-----------T--------FGASVFVTRKGG--TITTCASTS  347 (456)
T ss_dssp             HHHHHHHHHTSCCEEEEEECSCHH-----------H--------HHHHHHHEEEEE--EEEESCCTT
T ss_pred             HHHHHHHHhCCCCCcEEEEcCCch-----------h--------HHHHHHHhhCCc--EEEEEecCC
Confidence              2222222  2799999998731           0        135566666666  788887643

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.91  E-value=0.01  Score=51.74  Aligned_cols=68  Identities=15%  Similarity=0.230  Sum_probs=50.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||+|+|+|+ |..|..+++.|.+.|   ++++.+...+......   ..+  .++..|..|.+.+.++++   ++|.|+.
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G---~~v~~~~~~~~~~~~~---~~~--~~~~~~~~d~~~l~~~~~---~~d~v~~   68 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMG---FYVIVLDPTPRSPAGQ---VAD--EQIVAGFFDSERIEDLVK---GSDVTTY   68 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESSTTCTTGG---GSS--EEEECCTTCHHHHHHHHH---TCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCCCCchhh---hCc--eEEECCCCCHHHHHHHHh---cCCEEEe
Confidence            479999995 899999999999999   7888777654332111   111  246778889888877774   8999885

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.90  E-value=0.0015  Score=56.20  Aligned_cols=96  Identities=13%  Similarity=0.032  Sum_probs=62.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~   79 (320)
                      +.+|||+|| |-+|..+++.+...|   . +|+++++++++.+...+ +   .. ...|..+.+ +.+.+...  .++|+
T Consensus       165 g~~VlV~Ga-G~vG~~~~q~a~~~G---a~~Vi~~~~~~~~~~~~~~-l---a~-~v~~~~~~~-~~~~~~~~~~~g~D~  234 (343)
T 2dq4_A          165 GKSVLITGA-GPIGLMAAMVVRASG---AGPILVSDPNPYRLAFARP-Y---AD-RLVNPLEED-LLEVVRRVTGSGVEV  234 (343)
T ss_dssp             TSCEEEECC-SHHHHHHHHHHHHTT---CCSEEEECSCHHHHGGGTT-T---CS-EEECTTTSC-HHHHHHHHHSSCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC---CCEEEEECCCHHHHHHHHH-h---HH-hccCcCccC-HHHHHHHhcCCCCCE
Confidence            468999999 999999999999899   7 89999988654433322 2   11 234655533 33333221  37999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      ||+++|..         . .        +...++.++..|  ++|.++.
T Consensus       235 vid~~g~~---------~-~--------~~~~~~~l~~~G--~iv~~g~  263 (343)
T 2dq4_A          235 LLEFSGNE---------A-A--------IHQGLMALIPGG--EARILGI  263 (343)
T ss_dssp             EEECSCCH---------H-H--------HHHHHHHEEEEE--EEEECCC
T ss_pred             EEECCCCH---------H-H--------HHHHHHHHhcCC--EEEEEec
Confidence            99998731         0 0        135666666666  7888775

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.90  E-value=0.0028  Score=55.27  Aligned_cols=75  Identities=24%  Similarity=0.285  Sum_probs=51.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +.+|||+||+|-||...++.+...|   .+|++..+ +++.+ +...++..   ...|..+.+..++ +....++|+||+
T Consensus       184 g~~VlV~Ga~G~vG~~~~qla~~~G---a~Vi~~~~-~~~~~-~~~~lGa~---~v~~~~~~~~~~~-~~~~~g~D~vid  254 (375)
T 2vn8_A          184 GKRVLILGASGGVGTFAIQVMKAWD---AHVTAVCS-QDASE-LVRKLGAD---DVIDYKSGSVEEQ-LKSLKPFDFILD  254 (375)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC-GGGHH-HHHHTTCS---EEEETTSSCHHHH-HHTSCCBSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEeC-hHHHH-HHHHcCCC---EEEECCchHHHHH-HhhcCCCCEEEE
Confidence            4689999999999999999999999   78888774 33333 33444322   2346666543333 333347999999


Q ss_pred             CCCc
Q 020880           83 CAAL   86 (320)
Q Consensus        83 ~a~~   86 (320)
                      ++|.
T Consensus       255 ~~g~  258 (375)
T 2vn8_A          255 NVGG  258 (375)
T ss_dssp             SSCT
T ss_pred             CCCC
Confidence            9873

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.90  E-value=0.0014  Score=57.77  Aligned_cols=71  Identities=24%  Similarity=0.224  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      .+++|+|.|+ |-+|+.+++.|...|   . +|++..|+.++...+...++.  .     ..+.+++.+.+.   ++|+|
T Consensus       166 ~g~~VlIiGa-G~iG~~~a~~l~~~G---~~~V~v~~r~~~ra~~la~~~g~--~-----~~~~~~l~~~l~---~aDvV  231 (404)
T 1gpj_A          166 HDKTVLVVGA-GEMGKTVAKSLVDRG---VRAVLVANRTYERAVELARDLGG--E-----AVRFDELVDHLA---RSDVV  231 (404)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHC---CSEEEEECSSHHHHHHHHHHHTC--E-----ECCGGGHHHHHH---TCSEE
T ss_pred             cCCEEEEECh-HHHHHHHHHHHHHCC---CCEEEEEeCCHHHHHHHHHHcCC--c-----eecHHhHHHHhc---CCCEE
Confidence            3689999996 999999999999999   6 899999987655444443321  1     112234556665   89999


Q ss_pred             EECCCc
Q 020880           81 VNCAAL   86 (320)
Q Consensus        81 ih~a~~   86 (320)
                      |.+.+.
T Consensus       232 i~at~~  237 (404)
T 1gpj_A          232 VSATAA  237 (404)
T ss_dssp             EECCSS
T ss_pred             EEccCC
Confidence            999754

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.86  E-value=0.0021  Score=56.00  Aligned_cols=96  Identities=19%  Similarity=0.132  Sum_probs=63.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +.+|||+|+ |-||...++.+...|   .+|+++.+++++.+...+ ++.  . ...|..+.+.+.++.   .++|+||+
T Consensus       195 g~~VlV~Ga-G~vG~~aiqlak~~G---a~Vi~~~~~~~~~~~a~~-lGa--~-~vi~~~~~~~~~~~~---~g~Dvvid  263 (369)
T 1uuf_A          195 GKKVGVVGI-GGLGHMGIKLAHAMG---AHVVAFTTSEAKREAAKA-LGA--D-EVVNSRNADEMAAHL---KSFDFILN  263 (369)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHH-HTC--S-EEEETTCHHHHHTTT---TCEEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHH-cCC--c-EEeccccHHHHHHhh---cCCCEEEE
Confidence            468999997 779999999998899   789999988766554433 332  1 234555544333222   37999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      ++|...                  ++...++.++..|  ++|.++..
T Consensus       264 ~~g~~~------------------~~~~~~~~l~~~G--~iv~~G~~  290 (369)
T 1uuf_A          264 TVAAPH------------------NLDDFTTLLKRDG--TMTLVGAP  290 (369)
T ss_dssp             CCSSCC------------------CHHHHHTTEEEEE--EEEECCCC
T ss_pred             CCCCHH------------------HHHHHHHHhccCC--EEEEeccC
Confidence            987421                  0124556666666  78877653

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.86  E-value=0.0052  Score=52.21  Aligned_cols=111  Identities=13%  Similarity=0.023  Sum_probs=69.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhh----hh--CCCcceEE-EeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL----DA--LPHSFVFF-DVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~----~~--~~~~~~~~-~~Dl~d~~~~~~~~~~~~   75 (320)
                      ++||.|+|+ |.+|+.++..|+.+|.- .+|.+.++++++.+...    ..  +....... ..|+.+       ++   
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~-~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-------~~---   88 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLA-DEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-------SA---   88 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCC-SEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-------CS---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCC-CeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-------hC---
Confidence            579999998 99999999999999832 38888888765443321    11  11111212 223221       33   


Q ss_pred             CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      ++|+||-+||....+  .+...+.+..|+.-. ..+.+.+.+.... .++.+|.
T Consensus        89 daDiVIitaG~p~kp--G~tR~dll~~N~~I~-k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           89 GSKLVVITAGARQQE--GESRLNLVQRNVNIF-KFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             SCSEEEECCSCCCCS--SCCTTGGGHHHHHHH-HHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCEEEEeCCCCCCC--CCCHHHHHHhhHHHH-HHHHHHHHhhCCCceEEeCCC
Confidence            899999999874322  234566777776554 3666777665432 5666665

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.85  E-value=0.0013  Score=55.19  Aligned_cols=66  Identities=17%  Similarity=0.167  Sum_probs=49.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||+|.|.| +|.+|+.++..|.+.|   ++|++..|++++.+.+.+.   ++.       -..+..++++   ++|+||-
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G---~~V~~~dr~~~~~~~~~~~---g~~-------~~~~~~~~~~---~advvi~   63 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAG---FDVTVWNRNPAKCAPLVAL---GAR-------QASSPAEVCA---ACDITIA   63 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHT---CCEEEECSSGGGGHHHHHH---TCE-------ECSCHHHHHH---HCSEEEE
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCC---CeEEEEcCCHHHHHHHHHC---CCe-------ecCCHHHHHH---cCCEEEE
Confidence            46899998 8999999999999999   7899999998877665543   121       1123556666   6899998


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +..
T Consensus        64 ~v~   66 (287)
T 3pdu_A           64 MLA   66 (287)
T ss_dssp             CCS
T ss_pred             EcC
Confidence            753

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=96.85  E-value=0.0027  Score=54.94  Aligned_cols=99  Identities=16%  Similarity=0.066  Sum_probs=55.0

Q ss_pred             CcEEEEEcCCChhhHHHHH-HHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQ-GLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~-~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      +++|.|.||||++|+.|++ .|.++.+...++..+..+ +......+ +.+. ....-++.+++   . ++   ++|+||
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~-~~~~-~~~v~~~~~~~---~-~~---~vDvvf   73 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPS-FAKN-ETTLKDATSID---D-LK---KCDVII   73 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCT-TCCS-CCBCEETTCHH---H-HH---TCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHH-cCCC-ceEEEeCCChh---H-hc---CCCEEE
Confidence            5799999999999999999 555544211455544333 22211111 1111 11112333322   2 34   899999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeechh
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTDQ  130 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~~  130 (320)
                      -|++...   +                ..++..+.+.|++ ++|=.||..
T Consensus        74 ~a~~~~~---s----------------~~~~~~~~~~G~k~~VID~ss~f  104 (377)
T 3uw3_A           74 TCQGGDY---T----------------NDVFPKLRAAGWNGYWIDAASSL  104 (377)
T ss_dssp             ECSCHHH---H----------------HHHHHHHHHTTCCSEEEECSSTT
T ss_pred             ECCChHH---H----------------HHHHHHHHHCCCCEEEEeCCccc
Confidence            9876421   0                2566666677874 666666653

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.83  E-value=0.0019  Score=54.73  Aligned_cols=66  Identities=12%  Similarity=0.099  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .||+|.|.| .|.+|+.++..|.+.|   ++|++..|++++.+.+.+.   ++..       ..+..++++   ++|+||
T Consensus        20 ~m~~I~iIG-~G~mG~~~A~~l~~~G---~~V~~~dr~~~~~~~l~~~---g~~~-------~~~~~~~~~---~aDvvi   82 (310)
T 3doj_A           20 HMMEVGFLG-LGIMGKAMSMNLLKNG---FKVTVWNRTLSKCDELVEH---GASV-------CESPAEVIK---KCKYTI   82 (310)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSGGGGHHHHHT---TCEE-------CSSHHHHHH---HCSEEE
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHC---CCeE-------cCCHHHHHH---hCCEEE
Confidence            478999998 7999999999999999   8999999998777665542   1211       224556666   689999


Q ss_pred             ECC
Q 020880           82 NCA   84 (320)
Q Consensus        82 h~a   84 (320)
                      -+.
T Consensus        83 ~~v   85 (310)
T 3doj_A           83 AML   85 (310)
T ss_dssp             ECC
T ss_pred             EEc
Confidence            775

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.82  E-value=0.0014  Score=54.73  Aligned_cols=71  Identities=20%  Similarity=0.246  Sum_probs=50.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |++|+|.|.| +|-+|+.++..|++.|+...+|++..|++++...+.+.++  +..       ..+..++++   ++|+|
T Consensus         1 M~~~~I~iIG-~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~g--i~~-------~~~~~~~~~---~aDvV   67 (280)
T 3tri_A            1 MNTSNITFIG-GGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCG--VHT-------TQDNRQGAL---NADVV   67 (280)
T ss_dssp             -CCSCEEEES-CSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTC--CEE-------ESCHHHHHS---SCSEE
T ss_pred             CCCCEEEEEc-ccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcC--CEE-------eCChHHHHh---cCCeE
Confidence            7788999999 5999999999999999321289999999877766665432  221       112334454   88999


Q ss_pred             EECC
Q 020880           81 VNCA   84 (320)
Q Consensus        81 ih~a   84 (320)
                      |-+.
T Consensus        68 ilav   71 (280)
T 3tri_A           68 VLAV   71 (280)
T ss_dssp             EECS
T ss_pred             EEEe
Confidence            9875

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=96.81  E-value=0.0033  Score=55.80  Aligned_cols=97  Identities=16%  Similarity=0.182  Sum_probs=61.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccC-CCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCc---ccHHHHHHHhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEG-KPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG---SGFDAVALKFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~-~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~~~~d   78 (320)
                      ++||+|.| .|-||+.++..|.++.. ...+|+..+...... .+.+..  ++.+...++++.   +.+.++++   +.|
T Consensus        13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-~~~~~~--g~~~~~~~Vdadnv~~~l~aLl~---~~D   85 (480)
T 2ph5_A           13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-DVAQQY--GVSFKLQQITPQNYLEVIGSTLE---END   85 (480)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-CHHHHH--TCEEEECCCCTTTHHHHTGGGCC---TTC
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh-hHHhhc--CCceeEEeccchhHHHHHHHHhc---CCC
Confidence            46899999 89999999999988753 112677776654432 222222  245566666554   22334444   459


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEe
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHL  126 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~  126 (320)
                      +|||++-...                  . ..++++|.+.|+ .+|=+
T Consensus        86 vVIN~s~~~~------------------~-l~Im~acleaGv-~YlDT  113 (480)
T 2ph5_A           86 FLIDVSIGIS------------------S-LALIILCNQKGA-LYINA  113 (480)
T ss_dssp             EEEECCSSSC------------------H-HHHHHHHHHHTC-EEEES
T ss_pred             EEEECCcccc------------------C-HHHHHHHHHcCC-CEEEC
Confidence            9999653210                  1 389999999997 44433

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=96.80  E-value=0.0025  Score=55.10  Aligned_cols=98  Identities=17%  Similarity=0.096  Sum_probs=53.2

Q ss_pred             cEEEEEcCCChhhHHHHH-HHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQ-GLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~-~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |+|.|.||||++|+.|++ .|.++.+...++..+..+. ......+ +.+. ....-|..+++   . ++   ++|+||-
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~-~~~~-~~~~~~~~~~~---~-~~---~~Dvvf~   70 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPN-FGKD-AGMLHDAFDIE---S-LK---QLDAVIT   70 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCC-SSSC-CCBCEETTCHH---H-HT---TCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHH-hCCC-ceEEEecCChh---H-hc---cCCEEEE
Confidence            579999999999999999 5555442114555443322 2211111 1111 11112333322   1 33   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeechh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTDQ  130 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~~  130 (320)
                      |.+...   +                ..++..+.+.|++ ++|=.||..
T Consensus        71 a~~~~~---s----------------~~~~~~~~~~G~k~~VID~ss~f  100 (370)
T 3pzr_A           71 CQGGSY---T----------------EKVYPALRQAGWKGYWIDAASTL  100 (370)
T ss_dssp             CSCHHH---H----------------HHHHHHHHHTTCCCEEEECSSTT
T ss_pred             CCChHH---H----------------HHHHHHHHHCCCCEEEEeCCchh
Confidence            876421   0                2556666677874 566666543

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.79  E-value=0.0012  Score=55.97  Aligned_cols=109  Identities=15%  Similarity=0.130  Sum_probs=64.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhc--cCCCceEEEecCCCCChhhhhhhCC-------CcceEEEeeCCCcccHHHHHHHh
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEI--EGKPYDVAATHHSTPLPQLLLDALP-------HSFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~--g~~v~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      |||.|+|+ |.+|+.++..|..+  |   ++|.+.++++++.+.....+.       .... +.. -+|.   .+ ++  
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g---~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~-i~~-t~d~---~~-l~--   68 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLA---RELVLLDVVEGIPQGKALDMYESGPVGLFDTK-VTG-SNDY---AD-TA--   68 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCC---SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCE-EEE-ESCG---GG-GT--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCC---CEEEEEeCChhHHHHHHHhHHhhhhcccCCcE-EEE-CCCH---HH-HC--
Confidence            58999997 99999999999875  5   789999998776554321110       1111 111 0232   22 33  


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                       ++|+||-+++....  ........+..|+... ..+++.+.+.... .+|.+|.
T Consensus        69 -~aDvViiav~~p~~--~g~~r~dl~~~n~~i~-~~i~~~i~~~~~~~~viv~tN  119 (310)
T 1guz_A           69 -NSDIVIITAGLPRK--PGMTREDLLMKNAGIV-KEVTDNIMKHSKNPIIIVVSN  119 (310)
T ss_dssp             -TCSEEEECCSCCCC--TTCCHHHHHHHHHHHH-HHHHHHHHHHCSSCEEEECCS
T ss_pred             -CCCEEEEeCCCCCC--CCCCHHHHHHHHHHHH-HHHHHHHHHhCCCcEEEEEcC
Confidence             89999999874321  1122344555565443 3666666554322 5555544

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.77  E-value=0.00059  Score=58.06  Aligned_cols=111  Identities=14%  Similarity=0.110  Sum_probs=65.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhh----hhhCC---CcceEEEeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL----LDALP---HSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~----~~~~~---~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      ++||.|+|+ |.+|+.++..|+..|.. .+|++.+++++..+..    .+...   ....+. .  .+.+    .++   
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~-~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~--~~~~----al~---   73 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIA-DEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-H--GDYD----DCR---   73 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCC-SEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-E--CCGG----GTT---
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCC-CEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-c--CcHH----HhC---
Confidence            469999998 99999999999887732 4899999886533321    11111   123322 2  1221    233   


Q ss_pred             CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      ++|+||-+++....+.  ......+..|..-. ..+++.+.+.... .++.+|.
T Consensus        74 ~aDvViia~~~~~~~g--~~r~dl~~~n~~i~-~~i~~~i~~~~p~a~~iv~tN  124 (316)
T 1ldn_A           74 DADLVVICAGANQKPG--ETRLDLVDKNIAIF-RSIVESVMASGFQGLFLVATN  124 (316)
T ss_dssp             TCSEEEECCSCCCCTT--TCSGGGHHHHHHHH-HHHHHHHHHHTCCSEEEECSS
T ss_pred             CCCEEEEcCCCCCCCC--CCHHHHHHcChHHH-HHHHHHHHHHCCCCEEEEeCC
Confidence            8999999998753221  12234455554433 3666666665432 4555544

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.76  E-value=0.0025  Score=53.83  Aligned_cols=110  Identities=15%  Similarity=0.102  Sum_probs=59.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC------CcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP------HSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      |||.|+|| |.+|+.++..|...|+. .+|.+.++++++.+.....+.      .... +..  .+.+    .++   ++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~-~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~-i~~--~~~~----a~~---~a   68 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSC-SELVLVDRDEDRAQAEAEDIAHAAPVSHGTR-VWH--GGHS----ELA---DA   68 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCC-SEEEEECSSHHHHHHHHHHHTTSCCTTSCCE-EEE--ECGG----GGT---TC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCC-CEEEEEeCCHHHHHHHHHhhhhhhhhcCCeE-EEE--CCHH----HhC---CC
Confidence            58999997 99999999999999831 289999988654432222111      1122 222  1222    233   89


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      |+||.+++....+  .......+..|+... ..+++.+.+.... .+|.+|.
T Consensus        69 DvVIi~~~~~~~~--g~~r~dl~~~n~~i~-~~i~~~i~~~~p~~~vi~~tN  117 (304)
T 2v6b_A           69 QVVILTAGANQKP--GESRLDLLEKNADIF-RELVPQITRAAPDAVLLVTSN  117 (304)
T ss_dssp             SEEEECC--------------CHHHHHHHH-HHHHHHHHHHCSSSEEEECSS
T ss_pred             CEEEEcCCCCCCC--CCcHHHHHHhHHHHH-HHHHHHHHHhCCCeEEEEecC
Confidence            9999999753211  112234455555443 3666666554332 4555443

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.75  E-value=0.0033  Score=54.13  Aligned_cols=75  Identities=15%  Similarity=0.060  Sum_probs=52.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +.+|||+||+|-||...++.+...|   .+|+++++++++.+...+ ++..   ...|..+  ++.+.+...  .++|+|
T Consensus       151 g~~VlV~gg~G~vG~~a~qla~~~G---a~Vi~~~~~~~~~~~~~~-lGa~---~vi~~~~--~~~~~~~~~~~~g~Dvv  221 (346)
T 3fbg_A          151 GKTLLIINGAGGVGSIATQIAKAYG---LRVITTASRNETIEWTKK-MGAD---IVLNHKE--SLLNQFKTQGIELVDYV  221 (346)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTT---CEEEEECCSHHHHHHHHH-HTCS---EEECTTS--CHHHHHHHHTCCCEEEE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHh-cCCc---EEEECCc--cHHHHHHHhCCCCccEE
Confidence            5789999999999999999999999   899999987665544433 3321   2234433  233333322  268999


Q ss_pred             EECCCc
Q 020880           81 VNCAAL   86 (320)
Q Consensus        81 ih~a~~   86 (320)
                      |+++|.
T Consensus       222 ~d~~g~  227 (346)
T 3fbg_A          222 FCTFNT  227 (346)
T ss_dssp             EESSCH
T ss_pred             EECCCc
Confidence            999873

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.74  E-value=0.0035  Score=55.49  Aligned_cols=68  Identities=16%  Similarity=0.161  Sum_probs=52.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+++|+|+| .|.+|+.+++.+.+.|   ++|++++..+........     -.++..|..|.+.+.++++   ++|+|+
T Consensus        34 ~~~~IlIlG-~G~lg~~~~~aa~~lG---~~v~v~d~~~~~p~~~~a-----d~~~~~~~~d~~~l~~~a~---~~D~V~  101 (419)
T 4e4t_A           34 PGAWLGMVG-GGQLGRMFCFAAQSMG---YRVAVLDPDPASPAGAVA-----DRHLRAAYDDEAALAELAG---LCEAVS  101 (419)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCTTCHHHHHS-----SEEECCCTTCHHHHHHHHH---HCSEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEECCCCcCchhhhC-----CEEEECCcCCHHHHHHHHh---cCCEEE
Confidence            357999999 5899999999999999   888888766544322221     1346789999998888886   799988

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.74  E-value=0.0058  Score=53.19  Aligned_cols=99  Identities=15%  Similarity=0.113  Sum_probs=64.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCC-cccHHHHHHHh--CCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKS-GSGFDAVALKF--GQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~--~~~d   78 (320)
                      +.+|||+|+ |-||...++.+...|   . +|+++.+++++.+... .++.  . ...|..+ .+++.+.+...  +++|
T Consensus       193 g~~VlV~Ga-G~vG~~a~qla~~~G---a~~Vi~~~~~~~~~~~~~-~lGa--~-~vi~~~~~~~~~~~~~~~~~~~g~D  264 (374)
T 1cdo_A          193 GSTCAVFGL-GAVGLAAVMGCHSAG---AKRIIAVDLNPDKFEKAK-VFGA--T-DFVNPNDHSEPISQVLSKMTNGGVD  264 (374)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTT---CSEEEEECSCGGGHHHHH-HTTC--C-EEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC---CCEEEEEcCCHHHHHHHH-HhCC--c-eEEeccccchhHHHHHHHHhCCCCC
Confidence            468999995 999999999999899   6 7888888876655433 3332  2 2345543 12344433322  3799


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeech
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTD  129 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~  129 (320)
                      +||+++|..          ..        +...++.++.. |  ++|.++..
T Consensus       265 ~vid~~g~~----------~~--------~~~~~~~l~~~~G--~iv~~G~~  296 (374)
T 1cdo_A          265 FSLECVGNV----------GV--------MRNALESCLKGWG--VSVLVGWT  296 (374)
T ss_dssp             EEEECSCCH----------HH--------HHHHHHTBCTTTC--EEEECSCC
T ss_pred             EEEECCCCH----------HH--------HHHHHHHhhcCCc--EEEEEcCC
Confidence            999998731          00        12556666666 5  78887653

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.73  E-value=0.0041  Score=54.29  Aligned_cols=67  Identities=18%  Similarity=0.339  Sum_probs=51.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      +++|+|+| .|.+|+.+++.+.+.|   ++|++++..+........     -.++..|..|.+.+.++++   ++|+|.
T Consensus        12 ~~~IlIlG-~G~lg~~la~aa~~lG---~~viv~d~~~~~p~~~~a-----d~~~~~~~~d~~~l~~~~~---~~dvi~   78 (377)
T 3orq_A           12 GATIGIIG-GGQLGKMMAQSAQKMG---YKVVVLDPSEDCPCRYVA-----HEFIQAKYDDEKALNQLGQ---KCDVIT   78 (377)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESCTTCTTGGGS-----SEEEECCTTCHHHHHHHHH---HCSEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEECCCCChhhhhC-----CEEEECCCCCHHHHHHHHH---hCCcce
Confidence            67999999 6899999999999999   888888776543221111     1357789999998888887   688874

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.73  E-value=0.003  Score=54.83  Aligned_cols=99  Identities=15%  Similarity=0.205  Sum_probs=60.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh---hhhhhhCCCcceEEEeeCCC--cccHHHHHHHh----
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP---QLLLDALPHSFVFFDVDLKS--GSGFDAVALKF----   74 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~----   74 (320)
                      .+|||+||+|-+|...++.+...|   .+|++++++.++.   ..+...++..   ...|..+  .+++.+.+...    
T Consensus       169 ~~VlV~Ga~G~vG~~aiqlak~~G---a~vi~~~~~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~~~~i~~~t~~~  242 (364)
T 1gu7_A          169 DWFIQNGGTSAVGKYASQIGKLLN---FNSISVIRDRPNLDEVVASLKELGAT---QVITEDQNNSREFGPTIKEWIKQS  242 (364)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHT---CEEEEEECCCTTHHHHHHHHHHHTCS---EEEEHHHHHCGGGHHHHHHHHHHH
T ss_pred             cEEEECCCCcHHHHHHHHHHHHCC---CEEEEEecCccccHHHHHHHHhcCCe---EEEecCccchHHHHHHHHHHhhcc
Confidence            789999999999999999998899   8888888776651   1222333321   1223332  02222222211    


Q ss_pred             -CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           75 -GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        75 -~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                       .++|+||+++|...                  . ...++.++..|  +++.++..
T Consensus       243 ~~g~Dvvid~~G~~~------------------~-~~~~~~l~~~G--~~v~~g~~  277 (364)
T 1gu7_A          243 GGEAKLALNCVGGKS------------------S-TGIARKLNNNG--LMLTYGGM  277 (364)
T ss_dssp             TCCEEEEEESSCHHH------------------H-HHHHHTSCTTC--EEEECCCC
T ss_pred             CCCceEEEECCCchh------------------H-HHHHHHhccCC--EEEEecCC
Confidence             37999999987310                  0 13455555555  78887653

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.73  E-value=0.0024  Score=57.29  Aligned_cols=42  Identities=19%  Similarity=0.304  Sum_probs=36.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhc-cCCCc-eEEEecCCCC----Chhhhh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEI-EGKPY-DVAATHHSTP----LPQLLL   47 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~-g~~v~-~v~~~~r~~~----~~~~~~   47 (320)
                      .+|||.|.| +|++|..++..|.+. |   + +|++.+|+++    +.+.+.
T Consensus        17 ~~mkIaVIG-lG~mG~~lA~~la~~~G---~~~V~~~D~~~~~~~~kv~~l~   64 (478)
T 3g79_A           17 PIKKIGVLG-MGYVGIPAAVLFADAPC---FEKVLGFQRNSKSSGYKIEMLN   64 (478)
T ss_dssp             SCCEEEEEC-CSTTHHHHHHHHHHSTT---CCEEEEECCCCTTTTTHHHHHT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHhCC---CCeEEEEECChhHhHHHHHHHH
Confidence            468999999 799999999999999 9   8 9999999988    555443

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.73  E-value=0.002  Score=53.54  Aligned_cols=35  Identities=23%  Similarity=0.441  Sum_probs=28.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      ++||.|.|++|-+|+.+++.+.+...  +++.+..-.
T Consensus        21 ~irV~V~Ga~GrMGr~i~~~v~~~~~--~eLvg~vd~   55 (288)
T 3ijp_A           21 SMRLTVVGANGRMGRELITAIQRRKD--VELCAVLVR   55 (288)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTCSS--EEEEEEBCC
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCC--CEEEEEEec
Confidence            46999999999999999999886532  787766443

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.72  E-value=0.0024  Score=53.47  Aligned_cols=64  Identities=14%  Similarity=0.099  Sum_probs=49.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|.|.| +|.+|+.++..|.+.|   ++|++..|++++.+.+.+.   ++.       -..++.++++   ++|+||-+
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G---~~V~~~dr~~~~~~~~~~~---g~~-------~~~~~~~~~~---~aDvvi~~   64 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAG---CSVTIWNRSPEKAEELAAL---GAE-------RAATPCEVVE---SCPVTFAM   64 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSGGGGHHHHHT---TCE-------ECSSHHHHHH---HCSEEEEC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCC---CeEEEEcCCHHHHHHHHHC---CCe-------ecCCHHHHHh---cCCEEEEE
Confidence            6899999 7999999999999999   8899999998777665542   221       1224556666   68999977


Q ss_pred             C
Q 020880           84 A   84 (320)
Q Consensus        84 a   84 (320)
                      .
T Consensus        65 v   65 (287)
T 3pef_A           65 L   65 (287)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.72  E-value=0.0034  Score=52.17  Aligned_cols=66  Identities=18%  Similarity=0.329  Sum_probs=48.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .++++|+|+ |-.|+.++..|.+.|   . +|+...|+.++++.+.+.+    ..+        .+.++.+ + ++|+||
T Consensus       122 ~k~vlvlGa-GGaaraia~~L~~~G---~~~v~v~nRt~~ka~~La~~~----~~~--------~~~~l~~-l-~~DivI  183 (282)
T 3fbt_A          122 NNICVVLGS-GGAARAVLQYLKDNF---AKDIYVVTRNPEKTSEIYGEF----KVI--------SYDELSN-L-KGDVII  183 (282)
T ss_dssp             TSEEEEECS-STTHHHHHHHHHHTT---CSEEEEEESCHHHHHHHCTTS----EEE--------EHHHHTT-C-CCSEEE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcC---CCEEEEEeCCHHHHHHHHHhc----Ccc--------cHHHHHh-c-cCCEEE
Confidence            679999995 788999999999999   6 8898999977766665432    211        1222222 3 789999


Q ss_pred             ECCCc
Q 020880           82 NCAAL   86 (320)
Q Consensus        82 h~a~~   86 (320)
                      |+...
T Consensus       184 naTp~  188 (282)
T 3fbt_A          184 NCTPK  188 (282)
T ss_dssp             ECSST
T ss_pred             ECCcc
Confidence            99854

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.71  E-value=0.0039  Score=51.08  Aligned_cols=105  Identities=18%  Similarity=0.177  Sum_probs=60.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC-------------------CChhhhhhh---CCCcce--EEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-------------------PLPQLLLDA---LPHSFV--FFD   58 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~-------------------~~~~~~~~~---~~~~~~--~~~   58 (320)
                      .++|+|.|+ |-+|+++++.|...|.  -++...+++.                   .+++.+.+.   ..+.+.  .+.
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gv--g~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGV--GTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTC--SEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCC--CeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            569999996 5599999999999994  3555554431                   122222111   122333  222


Q ss_pred             eeCCCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        59 ~Dl~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      .+++ .+.+.++++   ++|+||.+...         ++.         ...+-++|.+.++ .+|+.+....+|
T Consensus       105 ~~~~-~~~~~~~~~---~~DvVi~~~d~---------~~~---------r~~l~~~~~~~~~-p~i~~~~~g~~G  156 (251)
T 1zud_1          105 QRLT-GEALKDAVA---RADVVLDCTDN---------MAT---------RQEINAACVALNT-PLITASAVGFGG  156 (251)
T ss_dssp             SCCC-HHHHHHHHH---HCSEEEECCSS---------HHH---------HHHHHHHHHHTTC-CEEEEEEEBTEE
T ss_pred             ccCC-HHHHHHHHh---cCCEEEECCCC---------HHH---------HHHHHHHHHHhCC-CEEEEeccccce
Confidence            2333 244555665   78999987531         111         0255666666666 688877655444

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.71  E-value=0.0025  Score=52.02  Aligned_cols=37  Identities=19%  Similarity=0.393  Sum_probs=32.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL   42 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~   42 (320)
                      .+|+|.|.| +|.+|+.+++.|.+.|   ++|++..|++++
T Consensus        18 ~~~kIgiIG-~G~mG~alA~~L~~~G---~~V~~~~r~~~~   54 (245)
T 3dtt_A           18 QGMKIAVLG-TGTVGRTMAGALADLG---HEVTIGTRDPKA   54 (245)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESCHHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCC---CEEEEEeCChhh
Confidence            468999998 8999999999999999   889999998654

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.70  E-value=0.0026  Score=52.36  Aligned_cols=67  Identities=13%  Similarity=0.237  Sum_probs=49.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||+|.|.| +|.+|+.++..|.+.|   ++|.+..|++++...+.+.++  +.       -..++.++++   ++|+||-
T Consensus         3 ~m~i~iiG-~G~mG~~~a~~l~~~g---~~v~~~~~~~~~~~~~~~~~g--~~-------~~~~~~~~~~---~~D~Vi~   66 (259)
T 2ahr_A            3 AMKIGIIG-VGKMASAIIKGLKQTP---HELIISGSSLERSKEIAEQLA--LP-------YAMSHQDLID---QVDLVIL   66 (259)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHTTSS---CEEEEECSSHHHHHHHHHHHT--CC-------BCSSHHHHHH---TCSEEEE
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCC---CeEEEECCCHHHHHHHHHHcC--CE-------eeCCHHHHHh---cCCEEEE
Confidence            57999999 7999999999999999   788888888766655544322  11       1223555666   7999998


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +..
T Consensus        67 ~v~   69 (259)
T 2ahr_A           67 GIK   69 (259)
T ss_dssp             CSC
T ss_pred             EeC
Confidence            763

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.70  E-value=0.0091  Score=49.84  Aligned_cols=62  Identities=18%  Similarity=0.118  Sum_probs=47.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+|.|.| .|-||+.+++.|...|   ++|++..|+..+...        ..       ..+++.++++   ++|+|+
T Consensus       121 ~g~tvGIIG-lG~IG~~vA~~l~~~G---~~V~~~dr~~~~~~~--------~~-------~~~~l~ell~---~aDiV~  178 (290)
T 3gvx_A          121 YGKALGILG-YGGIGRRVAHLAKAFG---MRVIAYTRSSVDQNV--------DV-------ISESPADLFR---QSDFVL  178 (290)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHHT---CEEEEECSSCCCTTC--------SE-------ECSSHHHHHH---HCSEEE
T ss_pred             ecchheeec-cCchhHHHHHHHHhhC---cEEEEEecccccccc--------cc-------ccCChHHHhh---ccCeEE
Confidence            368999999 8999999999999999   899999988654321        11       1235667777   789998


Q ss_pred             ECCC
Q 020880           82 NCAA   85 (320)
Q Consensus        82 h~a~   85 (320)
                      .+..
T Consensus       179 l~~P  182 (290)
T 3gvx_A          179 IAIP  182 (290)
T ss_dssp             ECCC
T ss_pred             EEee
Confidence            8764

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.69  E-value=0.0067  Score=52.86  Aligned_cols=98  Identities=14%  Similarity=0.099  Sum_probs=63.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCC-cccHHHHHHHh--CCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKS-GSGFDAVALKF--GQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~--~~~d   78 (320)
                      +.+|||+|+ |-||...++.+...|   . +|+++.+++++.+.. ..++.  . ...|..+ .+++.+.+...  +++|
T Consensus       196 g~~VlV~Ga-G~vG~~aiqlak~~G---a~~Vi~~~~~~~~~~~a-~~lGa--~-~vi~~~~~~~~~~~~v~~~~~~g~D  267 (376)
T 1e3i_A          196 GSTCAVFGL-GCVGLSAIIGCKIAG---ASRIIAIDINGEKFPKA-KALGA--T-DCLNPRELDKPVQDVITELTAGGVD  267 (376)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTT---CSEEEEECSCGGGHHHH-HHTTC--S-EEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC---CCeEEEEcCCHHHHHHH-HHhCC--c-EEEccccccchHHHHHHHHhCCCcc
Confidence            468999995 999999999998889   6 788888887665544 33332  2 2345543 12343333321  3799


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeec
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLST  128 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss  128 (320)
                      +||+++|..          ..        +...++.++.. |  ++|.++.
T Consensus       268 vvid~~G~~----------~~--------~~~~~~~l~~~~G--~iv~~G~  298 (376)
T 1e3i_A          268 YSLDCAGTA----------QT--------LKAAVDCTVLGWG--SCTVVGA  298 (376)
T ss_dssp             EEEESSCCH----------HH--------HHHHHHTBCTTTC--EEEECCC
T ss_pred             EEEECCCCH----------HH--------HHHHHHHhhcCCC--EEEEECC
Confidence            999998731          00        12556666666 5  8888775

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.69  E-value=0.0007  Score=57.80  Aligned_cols=95  Identities=15%  Similarity=0.097  Sum_probs=62.7

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEECC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCA   84 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a   84 (320)
                      +|||+||+|-+|...++.+...|   .+|+++++++++.+...+ ++..   ...|..+.+.+.++..  +++|+||.++
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~G---a~Vi~~~~~~~~~~~~~~-lGa~---~vi~~~~~~~~~~~~~--~~~d~v~d~~  219 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKLG---YQVAAVSGRESTHGYLKS-LGAN---RILSRDEFAESRPLEK--QLWAGAIDTV  219 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCGGGHHHHHH-HTCS---EEEEGGGSSCCCSSCC--CCEEEEEESS
T ss_pred             eEEEECCCcHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHh-cCCC---EEEecCCHHHHHhhcC--CCccEEEECC
Confidence            49999999999999999999999   889999988776554433 3322   1224433332222111  3789999987


Q ss_pred             CccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           85 ALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      |..           .        +...++.++..|  +++.++..
T Consensus       220 g~~-----------~--------~~~~~~~l~~~G--~iv~~G~~  243 (324)
T 3nx4_A          220 GDK-----------V--------LAKVLAQMNYGG--CVAACGLA  243 (324)
T ss_dssp             CHH-----------H--------HHHHHHTEEEEE--EEEECCCT
T ss_pred             CcH-----------H--------HHHHHHHHhcCC--EEEEEecC
Confidence            621           1        135666666666  78888754

>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...

Probab=96.68  E-value=0.01  Score=52.99  Aligned_cols=73  Identities=11%  Similarity=0.057  Sum_probs=48.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEe-------eCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV-------DLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~   75 (320)
                      ||+|||+|+ |.+|..+++.+.+.|   ++++++....+....... +.+  .++..       |..|.+.+.++++.. 
T Consensus         2 ~k~ilI~g~-g~~~~~~~~a~~~~G---~~vv~v~~~~~~~~~~~~-~ad--~~~~~~p~~~~~~~~d~~~l~~~~~~~-   73 (449)
T 2w70_A            2 LDKIVIANR-GEIALRILRACKELG---IKTVAVHSSADRDLKHVL-LAD--ETVCIGPAPSVKSYLNIPAIISAAEIT-   73 (449)
T ss_dssp             CSEEEECCC-HHHHHHHHHHHHHHT---CEEEEEEEGGGTTCHHHH-HSS--EEEEEECSSGGGTTTCHHHHHHHHHHH-
T ss_pred             CceEEEeCC-cHHHHHHHHHHHHcC---CeEEEEeccccccCchhh-hCC--EEEEcCCCCccccccCHHHHHHHHHHc-
Confidence            689999995 899999999999999   787776543221111111 111  12333       667777777777654 


Q ss_pred             CCCEEEEC
Q 020880           76 QPDVVVNC   83 (320)
Q Consensus        76 ~~d~Vih~   83 (320)
                      ++|.|+-.
T Consensus        74 ~~d~v~~~   81 (449)
T 2w70_A           74 GAVAIHPG   81 (449)
T ss_dssp             TCCEEECC
T ss_pred             CCCEEEEC
Confidence            89998854

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.68  E-value=0.002  Score=54.85  Aligned_cols=65  Identities=20%  Similarity=0.286  Sum_probs=49.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|+|.|.| .|.+|+.+++.|.+.|   ++|++..|++++.+.+.+.   ++..       ..++.++++   ++|+||-
T Consensus        31 ~~~I~iIG-~G~mG~~~a~~l~~~G---~~V~~~dr~~~~~~~l~~~---g~~~-------~~~~~e~~~---~aDvVi~   93 (320)
T 4dll_A           31 ARKITFLG-TGSMGLPMARRLCEAG---YALQVWNRTPARAASLAAL---GATI-------HEQARAAAR---DADIVVS   93 (320)
T ss_dssp             CSEEEEEC-CTTTHHHHHHHHHHTT---CEEEEECSCHHHHHHHHTT---TCEE-------ESSHHHHHT---TCSEEEE
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHhCC---CeEEEEcCCHHHHHHHHHC---CCEe-------eCCHHHHHh---cCCEEEE
Confidence            57999998 6999999999999999   8899999987766655442   2221       123455665   7899997


Q ss_pred             CC
Q 020880           83 CA   84 (320)
Q Consensus        83 ~a   84 (320)
                      +.
T Consensus        94 ~v   95 (320)
T 4dll_A           94 ML   95 (320)
T ss_dssp             CC
T ss_pred             EC
Confidence            75

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.67  E-value=0.0065  Score=52.87  Aligned_cols=99  Identities=10%  Similarity=0.096  Sum_probs=63.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCC-cccHHHHHHHh--CCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKS-GSGFDAVALKF--GQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~--~~~d   78 (320)
                      +.+|||+|+ |-||...++.+...|   . +|+++.+++++.+... .++.  . ...|..+ .+++.+.+...  +++|
T Consensus       191 g~~VlV~Ga-G~vG~~avqla~~~G---a~~Vi~~~~~~~~~~~~~-~lGa--~-~vi~~~~~~~~~~~~v~~~~~~g~D  262 (373)
T 2fzw_A          191 GSVCAVFGL-GGVGLAVIMGCKVAG---ASRIIGVDINKDKFARAK-EFGA--T-ECINPQDFSKPIQEVLIEMTDGGVD  262 (373)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHT---CSEEEEECSCGGGHHHHH-HHTC--S-EEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC---CCeEEEEcCCHHHHHHHH-HcCC--c-eEeccccccccHHHHHHHHhCCCCC
Confidence            468999995 999999999998889   6 7888888876655443 2322  1 2345543 13344444332  3699


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeech
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTD  129 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~  129 (320)
                      +||+++|..          ..        +...++.++.. |  ++|.++..
T Consensus       263 ~vid~~g~~----------~~--------~~~~~~~l~~~~G--~iv~~G~~  294 (373)
T 2fzw_A          263 YSFECIGNV----------KV--------MRAALEACHKGWG--VSVVVGVA  294 (373)
T ss_dssp             EEEECSCCH----------HH--------HHHHHHTBCTTTC--EEEECSCC
T ss_pred             EEEECCCcH----------HH--------HHHHHHhhccCCc--EEEEEecC
Confidence            999998731          00        12556666666 5  78887643

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.66  E-value=0.0041  Score=53.57  Aligned_cols=90  Identities=18%  Similarity=0.149  Sum_probs=62.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +.+|||+|+ |-||...++.+...|   .+|+++.+++++.+...+ ++...  +.   .+.+.+.+      ++|+||+
T Consensus       177 g~~VlV~Ga-G~vG~~a~qla~~~G---a~Vi~~~~~~~~~~~~~~-lGa~~--v~---~~~~~~~~------~~D~vid  240 (348)
T 3two_A          177 GTKVGVAGF-GGLGSMAVKYAVAMG---AEVSVFARNEHKKQDALS-MGVKH--FY---TDPKQCKE------ELDFIIS  240 (348)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHTT---CEEEEECSSSTTHHHHHH-TTCSE--EE---SSGGGCCS------CEEEEEE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHh-cCCCe--ec---CCHHHHhc------CCCEEEE
Confidence            578999997 999999999999999   899999998877665443 43221  22   34443322      7899999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      ++|...                  ++...++.++..|  +++.++.
T Consensus       241 ~~g~~~------------------~~~~~~~~l~~~G--~iv~~G~  266 (348)
T 3two_A          241 TIPTHY------------------DLKDYLKLLTYNG--DLALVGL  266 (348)
T ss_dssp             CCCSCC------------------CHHHHHTTEEEEE--EEEECCC
T ss_pred             CCCcHH------------------HHHHHHHHHhcCC--EEEEECC
Confidence            987421                  0135666666666  7888764

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.65  E-value=0.004  Score=52.40  Aligned_cols=42  Identities=17%  Similarity=0.238  Sum_probs=37.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD   48 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~   48 (320)
                      |+||-+.| .|-+|+.+++.|++.|   |+|++..|++++.+.+.+
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~G---~~v~v~dr~~~~~~~l~~   44 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKAG---YLLNVFDLVQSAVDGLVA   44 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTT---CEEEEECSSHHHHHHHHH
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhCC---CeEEEEcCCHHHHHHHHH
Confidence            68999999 8999999999999999   899999999887776655

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.65  E-value=0.0032  Score=56.10  Aligned_cols=41  Identities=24%  Similarity=0.306  Sum_probs=34.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD   48 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~   48 (320)
                      |+|.|.| +|++|..++..|.+.|   ++|++..|++++.+.+..
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G---~~V~~~d~~~~~~~~l~~   41 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARG---HEVIGVDVSSTKIDLINQ   41 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTT---CEEEEECSCHHHHHHHHT
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHhC
Confidence            4799999 7999999999999999   889999998776655543

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.65  E-value=0.0013  Score=56.29  Aligned_cols=111  Identities=15%  Similarity=0.156  Sum_probs=62.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-------CCcceEEEeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-------PHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      ++||.|+|| |.+|+.++..|...|+  .+|++.+++++..+.....+       ..... +... +|   + +.++   
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~--~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~-i~~t-~d---~-~al~---   81 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDL--GDVYMFDIIEGVPQGKALDLNHCMALIGSPAK-IFGE-NN---Y-EYLQ---   81 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECSSTTHHHHHHHHHHHHHHHHTCCCC-EEEE-SC---G-GGGT---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHHHHhHhhccCCCCE-EEEC-CC---H-HHHC---
Confidence            468999997 9999999999999993  28999999877655321111       01111 1110 22   2 1233   


Q ss_pred             CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      ++|+||-+++...-+  ..........|+.-. ..+.+.+.+.... .+|.+|.
T Consensus        82 ~aD~VI~avg~p~k~--g~tr~dl~~~n~~i~-~~i~~~i~~~~p~a~viv~tN  132 (328)
T 2hjr_A           82 NSDVVIITAGVPRKP--NMTRSDLLTVNAKIV-GSVAENVGKYCPNAFVICITN  132 (328)
T ss_dssp             TCSEEEECCSCCCCT--TCCSGGGHHHHHHHH-HHHHHHHHHHCTTCEEEECCS
T ss_pred             CCCEEEEcCCCCCCC--CCchhhHHhhhHHHH-HHHHHHHHHHCCCeEEEEecC
Confidence            899999998753211  111223334444333 2555555543322 4555554

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.64  E-value=0.0036  Score=52.71  Aligned_cols=35  Identities=23%  Similarity=0.439  Sum_probs=31.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      +++|.|.||+|.+|+.++..|.+.|   ++|.+..|++
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G---~~V~~~~~~~   55 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASG---YPISILDRED   55 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTT---CCEEEECTTC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCC---CeEEEEECCc
Confidence            4689999999999999999999999   7888887764

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.63  E-value=0.0078  Score=52.38  Aligned_cols=98  Identities=13%  Similarity=0.101  Sum_probs=63.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCC-cccHHHHHHHh--CCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKS-GSGFDAVALKF--GQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~--~~~d   78 (320)
                      ..+|||+|+ |-||...++.+...|   . +|+++.+++++.+.. ..++.  . ...|..+ .+++.+.+...  +++|
T Consensus       192 g~~VlV~Ga-G~vG~~a~qla~~~G---a~~Vi~~~~~~~~~~~~-~~lGa--~-~vi~~~~~~~~~~~~~~~~~~~g~D  263 (374)
T 2jhf_A          192 GSTCAVFGL-GGVGLSVIMGCKAAG---AARIIGVDINKDKFAKA-KEVGA--T-ECVNPQDYKKPIQEVLTEMSNGGVD  263 (374)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTT---CSEEEEECSCGGGHHHH-HHTTC--S-EEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC---CCeEEEEcCCHHHHHHH-HHhCC--c-eEecccccchhHHHHHHHHhCCCCc
Confidence            468999995 999999999999899   6 788888887665544 33332  2 2345543 13344444332  3699


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeec
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLST  128 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss  128 (320)
                      +||+++|..          ..        +...++.++.. |  ++|.++.
T Consensus       264 ~vid~~g~~----------~~--------~~~~~~~l~~~~G--~iv~~G~  294 (374)
T 2jhf_A          264 FSFEVIGRL----------DT--------MVTALSCCQEAYG--VSVIVGV  294 (374)
T ss_dssp             EEEECSCCH----------HH--------HHHHHHHBCTTTC--EEEECSC
T ss_pred             EEEECCCCH----------HH--------HHHHHHHhhcCCc--EEEEecc
Confidence            999998731          00        12556666666 5  7887764

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.62  E-value=0.0009  Score=56.88  Aligned_cols=110  Identities=11%  Similarity=0.045  Sum_probs=64.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC------CCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL------PHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      +||.|+|| |.+|+.++-.|+..+.- .++.+.++++++.+.....+      ...+. +..|  +.+    .++   ++
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~-~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~-v~~~--~~~----a~~---~a   73 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIA-EEFVIVDVVKDRTKGDALDLEDAQAFTAPKK-IYSG--EYS----DCK---DA   73 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCC-SEEEEECSSHHHHHHHHHHHHGGGGGSCCCE-EEEC--CGG----GGT---TC
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCC-CEEEEEeCCchHHHHHHHHHHHHHHhcCCeE-EEEC--CHH----HhC---CC
Confidence            69999998 99999999999988742 47888888755444322111      12233 2222  222    243   89


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      |+||.+++...-+  .......+..|+... ..+.+.+.+.... .+|.+|.
T Consensus        74 DvVii~ag~~~~~--g~~R~dl~~~n~~i~-~~i~~~i~~~~p~a~iiv~tN  122 (318)
T 1ez4_A           74 DLVVITAGAPQKP--GESRLDLVNKNLNIL-SSIVKPVVDSGFDGIFLVAAN  122 (318)
T ss_dssp             SEEEECCCC------------CHHHHHHHH-HHHHHHHHHTTCCSEEEECSS
T ss_pred             CEEEECCCCCCCC--CCCHHHHHHHHHHHH-HHHHHHHHHhCCCeEEEEeCC
Confidence            9999999864221  122334555665544 3667766665432 5666655

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.62  E-value=0.0012  Score=56.22  Aligned_cols=111  Identities=13%  Similarity=0.053  Sum_probs=66.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC------CCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL------PHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      ++||.|+|| |.+|+.++-.|+..+.- .++.+.++++++.+.....+      ...+. +..|  +.+    .++   +
T Consensus         9 ~~KI~IiGa-G~vG~~la~~l~~~~~~-~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~-i~~~--~~~----a~~---~   76 (326)
T 2zqz_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIA-QEIGIVDIFKDKTKGDAIDLSNALPFTSPKK-IYSA--EYS----DAK---D   76 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCC-SEEEEECSCHHHHHHHHHHHHTTGGGSCCCE-EEEC--CGG----GGG---G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCC-CEEEEEeCCchHhHHHHHHHHHHHHhcCCeE-EEEC--CHH----HhC---C
Confidence            579999998 99999999999888742 47888888765443322211      12223 2222  222    244   8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      +|+||..++...-+  .......+..|+... ..+.+.+.+.... .+|.+|.
T Consensus        77 aDvVii~ag~~~k~--g~~R~dl~~~n~~i~-~~i~~~i~~~~p~a~iiv~tN  126 (326)
T 2zqz_A           77 ADLVVITAGAPQKP--GETRLDLVNKNLKIL-KSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             CSEEEECCCCC-------CHHHHHHHHHHHH-HHHHHHHHHHTCCSEEEECSS
T ss_pred             CCEEEEcCCCCCCC--CCCHHHHHHHHHHHH-HHHHHHHHHHCCCeEEEEeCC
Confidence            99999999864221  123345566666554 3666666655432 5666655

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.60  E-value=0.0046  Score=53.99  Aligned_cols=100  Identities=14%  Similarity=0.092  Sum_probs=63.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCC--CcccHHHHHHHh-C--CC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK--SGSGFDAVALKF-G--QP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~--d~~~~~~~~~~~-~--~~   77 (320)
                      +.+|||+| +|-+|...++.+...|.  .+|+++.+++++.+... .++.  . ...|..  +.+++.+.+... +  ++
T Consensus       196 g~~VlV~G-aG~vG~~aiqlak~~Ga--~~Vi~~~~~~~~~~~~~-~lGa--~-~vi~~~~~~~~~~~~~v~~~~~g~g~  268 (380)
T 1vj0_A          196 GKTVVIQG-AGPLGLFGVVIARSLGA--ENVIVIAGSPNRLKLAE-EIGA--D-LTLNRRETSVEERRKAIMDITHGRGA  268 (380)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTB--SEEEEEESCHHHHHHHH-HTTC--S-EEEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHcCC--ceEEEEcCCHHHHHHHH-HcCC--c-EEEeccccCcchHHHHHHHHhCCCCC
Confidence            46899999 89999999999988882  28999998866554433 3332  2 223544  122333333322 2  68


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      |+||+++|...          .        +...++.++..|  ++|.++..
T Consensus       269 Dvvid~~g~~~----------~--------~~~~~~~l~~~G--~iv~~G~~  300 (380)
T 1vj0_A          269 DFILEATGDSR----------A--------LLEGSELLRRGG--FYSVAGVA  300 (380)
T ss_dssp             EEEEECSSCTT----------H--------HHHHHHHEEEEE--EEEECCCC
T ss_pred             cEEEECCCCHH----------H--------HHHHHHHHhcCC--EEEEEecC
Confidence            99999987310          0        135566666666  78887654

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.59  E-value=0.00079  Score=56.35  Aligned_cols=43  Identities=23%  Similarity=0.203  Sum_probs=36.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhh
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL   47 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~   47 (320)
                      |++++|.|.| +|.+|+.++..|...|   ++|++.+|+++..+...
T Consensus         2 m~~~kV~VIG-aG~mG~~iA~~la~~G---~~V~l~d~~~~~~~~~~   44 (283)
T 4e12_A            2 TGITNVTVLG-TGVLGSQIAFQTAFHG---FAVTAYDINTDALDAAK   44 (283)
T ss_dssp             CSCCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSHHHHHHHH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCC---CeEEEEeCCHHHHHHHH
Confidence            3468999998 5999999999999999   89999999876655443

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.58  E-value=0.0048  Score=54.35  Aligned_cols=71  Identities=20%  Similarity=0.252  Sum_probs=51.9

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |++++|+|+| .|.+|..+++.+.+.|   ++|++++ .+........   +....+.+|..|.+.+.++++   .+|+|
T Consensus        22 m~~~~I~ilG-gG~lg~~l~~aa~~lG---~~v~~~d-~~~~p~~~~a---d~~~~~~~~~~d~~~l~~~a~---~~d~i   90 (403)
T 3k5i_A           22 WNSRKVGVLG-GGQLGRMLVESANRLN---IQVNVLD-ADNSPAKQIS---AHDGHVTGSFKEREAVRQLAK---TCDVV   90 (403)
T ss_dssp             CSCCEEEEEC-CSHHHHHHHHHHHHHT---CEEEEEE-STTCTTGGGC---CSSCCEESCTTCHHHHHHHHT---TCSEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEE-CCCCcHHHhc---cccceeecCCCCHHHHHHHHH---hCCEE
Confidence            3467999999 5899999999999999   8888887 4433222111   112347789999888888876   78987


Q ss_pred             EE
Q 020880           81 VN   82 (320)
Q Consensus        81 ih   82 (320)
                      +-
T Consensus        91 ~~   92 (403)
T 3k5i_A           91 TA   92 (403)
T ss_dssp             EE
T ss_pred             EE
Confidence            63

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=96.58  E-value=0.0055  Score=51.39  Aligned_cols=65  Identities=17%  Similarity=0.214  Sum_probs=46.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ||+|.|.| +|.+|+.++..|.+.|   ++|++.. ++++...+.+.   ++.       -..+..++++   ++|+||-
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g---~~V~~~~-~~~~~~~~~~~---g~~-------~~~~~~~~~~---~~D~vi~   64 (295)
T 1yb4_A            3 AMKLGFIG-LGIMGSPMAINLARAG---HQLHVTT-IGPVADELLSL---GAV-------NVETARQVTE---FADIIFI   64 (295)
T ss_dssp             -CEEEECC-CSTTHHHHHHHHHHTT---CEEEECC-SSCCCHHHHTT---TCB-------CCSSHHHHHH---TCSEEEE
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhCC---CEEEEEc-CHHHHHHHHHc---CCc-------ccCCHHHHHh---cCCEEEE
Confidence            57999999 7999999999999999   7888777 66665554432   111       1233555665   7899998


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +..
T Consensus        65 ~vp   67 (295)
T 1yb4_A           65 MVP   67 (295)
T ss_dssp             CCS
T ss_pred             ECC
Confidence            763

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.58  E-value=0.0085  Score=52.13  Aligned_cols=98  Identities=17%  Similarity=0.114  Sum_probs=63.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCC-cccHHHHHHHh--CCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKS-GSGFDAVALKF--GQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~--~~~d   78 (320)
                      +.+|||+|+ |-||...++.+...|   . +|+++.+++++.+... .++.  . ...|..+ .+++.+.+...  +++|
T Consensus       192 g~~VlV~Ga-G~vG~~aiqlak~~G---a~~Vi~~~~~~~~~~~a~-~lGa--~-~vi~~~~~~~~~~~~i~~~t~gg~D  263 (373)
T 1p0f_A          192 GSTCAVFGL-GGVGFSAIVGCKAAG---ASRIIGVGTHKDKFPKAI-ELGA--T-ECLNPKDYDKPIYEVICEKTNGGVD  263 (373)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHT---CSEEEEECSCGGGHHHHH-HTTC--S-EEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC---CCeEEEECCCHHHHHHHH-HcCC--c-EEEecccccchHHHHHHHHhCCCCC
Confidence            468999995 999999999988889   6 7888888876654433 3332  2 2345443 12344433322  3799


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeec
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLST  128 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss  128 (320)
                      +||.++|..          ..        +...++.++.. |  ++|.++.
T Consensus       264 vvid~~g~~----------~~--------~~~~~~~l~~~~G--~iv~~G~  294 (373)
T 1p0f_A          264 YAVECAGRI----------ET--------MMNALQSTYCGSG--VTVVLGL  294 (373)
T ss_dssp             EEEECSCCH----------HH--------HHHHHHTBCTTTC--EEEECCC
T ss_pred             EEEECCCCH----------HH--------HHHHHHHHhcCCC--EEEEEcc
Confidence            999998731          00        12556666665 5  7887764

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.58  E-value=0.0022  Score=53.98  Aligned_cols=65  Identities=20%  Similarity=0.269  Sum_probs=47.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|.|.| +|.+|+.++..|.+.|   ++|.+..|++++.+.+.+.   ++..       ..++.++++   ++|+||-+
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g---~~V~~~~~~~~~~~~~~~~---g~~~-------~~~~~~~~~---~~D~vi~~   68 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAG---YSLVVSDRNPEAIADVIAA---GAET-------ASTAKAIAE---QCDVIITM   68 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHT---TCEE-------CSSHHHHHH---HCSEEEEC
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHC---CCee-------cCCHHHHHh---CCCEEEEE
Confidence            6899999 7999999999999999   7898888887665554432   2221       123445565   68999988


Q ss_pred             CC
Q 020880           84 AA   85 (320)
Q Consensus        84 a~   85 (320)
                      ..
T Consensus        69 v~   70 (299)
T 1vpd_A           69 LP   70 (299)
T ss_dssp             CS
T ss_pred             CC
Confidence            64

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=96.57  E-value=0.0033  Score=56.50  Aligned_cols=75  Identities=12%  Similarity=0.237  Sum_probs=50.3

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |.||+|.|.| .|.+|+.++..|.+.|   ++|.+..|++++.+.+.+.......     +.-..++.++++.+.++|+|
T Consensus         2 ~~~~kIgiIG-lG~MG~~lA~~L~~~G---~~V~v~dr~~~~~~~l~~~g~~g~~-----i~~~~s~~e~v~~l~~aDvV   72 (484)
T 4gwg_A            2 NAQADIALIG-LAVMGQNLILNMNDHG---FVVCAFNRTVSKVDDFLANEAKGTK-----VVGAQSLKEMVSKLKKPRRI   72 (484)
T ss_dssp             -CCBSEEEEC-CSHHHHHHHHHHHHTT---CCEEEECSSTHHHHHHHHTTTTTSS-----CEECSSHHHHHHTBCSSCEE
T ss_pred             CCCCEEEEEC-hhHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHhcccCCCc-----eeccCCHHHHHhhccCCCEE
Confidence            5678999999 7999999999999999   8899999998777666543111111     10012344555533357777


Q ss_pred             EECC
Q 020880           81 VNCA   84 (320)
Q Consensus        81 ih~a   84 (320)
                      |-+.
T Consensus        73 il~V   76 (484)
T 4gwg_A           73 ILLV   76 (484)
T ss_dssp             EECS
T ss_pred             EEec
Confidence            7654

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.56  E-value=0.0023  Score=53.89  Aligned_cols=67  Identities=15%  Similarity=0.133  Sum_probs=47.5

Q ss_pred             CC-CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            1 MS-KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         1 m~-~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |+ +|+|.|.| +|.+|+.++..|.+.|   ++|++..|++++...+.+.   ++..       ..+..++++   ++|+
T Consensus         1 M~~~~~i~iiG-~G~~G~~~a~~l~~~g---~~V~~~~~~~~~~~~~~~~---g~~~-------~~~~~~~~~---~~D~   63 (301)
T 3cky_A            1 MEKSIKIGFIG-LGAMGKPMAINLLKEG---VTVYAFDLMEANVAAVVAQ---GAQA-------CENNQKVAA---ASDI   63 (301)
T ss_dssp             ---CCEEEEEC-CCTTHHHHHHHHHHTT---CEEEEECSSHHHHHHHHTT---TCEE-------CSSHHHHHH---HCSE
T ss_pred             CCCCCEEEEEC-ccHHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHC---CCee-------cCCHHHHHh---CCCE
Confidence            44 57999999 7999999999999999   7898888886655544332   2221       123445565   6899


Q ss_pred             EEECC
Q 020880           80 VVNCA   84 (320)
Q Consensus        80 Vih~a   84 (320)
                      ||-+.
T Consensus        64 vi~~v   68 (301)
T 3cky_A           64 IFTSL   68 (301)
T ss_dssp             EEECC
T ss_pred             EEEEC
Confidence            99876

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.54  E-value=0.013  Score=51.03  Aligned_cols=76  Identities=18%  Similarity=0.043  Sum_probs=51.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh-CCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF-GQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~d~Vi   81 (320)
                      +.+|||+||+|-+|...++.+...|   .+|++.. ++++. .+...++.  . ...|..+.+..+.+.+.. +++|+||
T Consensus       165 g~~VlV~Ga~G~vG~~a~qla~~~G---a~Vi~~~-~~~~~-~~~~~lGa--~-~vi~~~~~~~~~~v~~~t~g~~d~v~  236 (371)
T 3gqv_A          165 PVYVLVYGGSTATATVTMQMLRLSG---YIPIATC-SPHNF-DLAKSRGA--E-EVFDYRAPNLAQTIRTYTKNNLRYAL  236 (371)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEE-CGGGH-HHHHHTTC--S-EEEETTSTTHHHHHHHHTTTCCCEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCC---CEEEEEe-CHHHH-HHHHHcCC--c-EEEECCCchHHHHHHHHccCCccEEE
Confidence            4689999999999999999999999   7888776 44443 34444442  2 344666654333333222 3699999


Q ss_pred             ECCCc
Q 020880           82 NCAAL   86 (320)
Q Consensus        82 h~a~~   86 (320)
                      .+.|.
T Consensus       237 d~~g~  241 (371)
T 3gqv_A          237 DCITN  241 (371)
T ss_dssp             ESSCS
T ss_pred             ECCCc
Confidence            99873

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.53  E-value=0.0013  Score=54.53  Aligned_cols=68  Identities=12%  Similarity=0.091  Sum_probs=47.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      +++++|+|+ |-+|+.++..|.+.|   . +|+...|+.++...+...    +..+     ..+++.+++.   ++|+||
T Consensus       117 ~k~vlvlGa-Gg~g~aia~~L~~~G---~~~v~v~~R~~~~a~~la~~----~~~~-----~~~~~~~~~~---~aDiVI  180 (277)
T 3don_A          117 DAYILILGA-GGASKGIANELYKIV---RPTLTVANRTMSRFNNWSLN----INKI-----NLSHAESHLD---EFDIII  180 (277)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHTTC---CSCCEEECSCGGGGTTCCSC----CEEE-----CHHHHHHTGG---GCSEEE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCC---CCEEEEEeCCHHHHHHHHHh----cccc-----cHhhHHHHhc---CCCEEE
Confidence            578999996 889999999999999   6 788889987766544331    2111     1222333333   799999


Q ss_pred             ECCCc
Q 020880           82 NCAAL   86 (320)
Q Consensus        82 h~a~~   86 (320)
                      ++...
T Consensus       181 naTp~  185 (277)
T 3don_A          181 NTTPA  185 (277)
T ss_dssp             ECCC-
T ss_pred             ECccC
Confidence            98754

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=96.51  E-value=0.002  Score=52.68  Aligned_cols=66  Identities=14%  Similarity=0.250  Sum_probs=48.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc----eEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY----DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~----~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      +|||.|.| +|.+|+.+++.|++.|   +    +|.+..|++++.+.+.+.++  +.     .  ..+..++++   ++|
T Consensus         2 ~~~i~iIG-~G~mG~~~a~~l~~~g---~~~~~~V~~~~r~~~~~~~~~~~~g--~~-----~--~~~~~e~~~---~aD   65 (247)
T 3gt0_A            2 DKQIGFIG-CGNMGMAMIGGMINKN---IVSSNQIICSDLNTANLKNASEKYG--LT-----T--TTDNNEVAK---NAD   65 (247)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTT---SSCGGGEEEECSCHHHHHHHHHHHC--CE-----E--CSCHHHHHH---HCS
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHhCC---CCCCCeEEEEeCCHHHHHHHHHHhC--CE-----E--eCChHHHHH---hCC
Confidence            47899999 8999999999999999   5    89999998776666544322  21     1  123445565   689


Q ss_pred             EEEECC
Q 020880           79 VVVNCA   84 (320)
Q Consensus        79 ~Vih~a   84 (320)
                      +||-+.
T Consensus        66 vVilav   71 (247)
T 3gt0_A           66 ILILSI   71 (247)
T ss_dssp             EEEECS
T ss_pred             EEEEEe
Confidence            999876

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.50  E-value=0.0021  Score=55.32  Aligned_cols=97  Identities=14%  Similarity=0.145  Sum_probs=61.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhc--cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCC-cccHHHHHHHhCCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEI--EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS-GSGFDAVALKFGQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~--g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~d~   79 (320)
                      +.+|||+|| |-||...++.+...  |   .+|+++.+++++.+...+ ++.  . ...|..+ .+.+.++... .++|+
T Consensus       171 g~~VlV~Ga-G~vG~~aiqlak~~~~G---a~Vi~~~~~~~~~~~~~~-lGa--~-~vi~~~~~~~~~~~~~~g-~g~D~  241 (344)
T 2h6e_A          171 EPVVIVNGI-GGLAVYTIQILKALMKN---ITIVGISRSKKHRDFALE-LGA--D-YVSEMKDAESLINKLTDG-LGASI  241 (344)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHCTT---CEEEEECSCHHHHHHHHH-HTC--S-EEECHHHHHHHHHHHHTT-CCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHhcCC---CEEEEEeCCHHHHHHHHH-hCC--C-EEeccccchHHHHHhhcC-CCccE
Confidence            468999999 99999999999888  9   789999988665544332 321  1 1234333 2223232221 26899


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      ||+++|..          ..        +...++.++..|  +++.++.
T Consensus       242 vid~~g~~----------~~--------~~~~~~~l~~~G--~iv~~g~  270 (344)
T 2h6e_A          242 AIDLVGTE----------ET--------TYNLGKLLAQEG--AIILVGM  270 (344)
T ss_dssp             EEESSCCH----------HH--------HHHHHHHEEEEE--EEEECCC
T ss_pred             EEECCCCh----------HH--------HHHHHHHhhcCC--EEEEeCC
Confidence            99998731          00        135566666666  7887765

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=96.49  E-value=0.0025  Score=57.44  Aligned_cols=74  Identities=19%  Similarity=0.269  Sum_probs=49.6

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC-CcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |++|+|.|.| .|-+|+.++..|.+.|   ++|.+..|++++.+.+.+..+ .++.  .     ..++.++++.+.++|+
T Consensus        13 ~~~~~IgvIG-lG~MG~~lA~~La~~G---~~V~v~~r~~~~~~~l~~~~~~~gi~--~-----~~s~~e~v~~l~~aDv   81 (480)
T 2zyd_A           13 MSKQQIGVVG-MAVMGRNLALNIESRG---YTVSIFNRSREKTEEVIAENPGKKLV--P-----YYTVKEFVESLETPRR   81 (480)
T ss_dssp             --CBSEEEEC-CSHHHHHHHHHHHTTT---CCEEEECSSHHHHHHHHHHSTTSCEE--E-----CSSHHHHHHTBCSSCE
T ss_pred             cCCCeEEEEc-cHHHHHHHHHHHHhCC---CeEEEEeCCHHHHHHHHhhCCCCCeE--E-----eCCHHHHHhCCCCCCE
Confidence            7789999999 7999999999999999   789999998777666554321 0111  1     1234455552223788


Q ss_pred             EEECCC
Q 020880           80 VVNCAA   85 (320)
Q Consensus        80 Vih~a~   85 (320)
                      ||-+.-
T Consensus        82 Vil~Vp   87 (480)
T 2zyd_A           82 ILLMVK   87 (480)
T ss_dssp             EEECSC
T ss_pred             EEEECC
Confidence            776653

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.48  E-value=0.0019  Score=54.98  Aligned_cols=41  Identities=22%  Similarity=0.387  Sum_probs=34.7

Q ss_pred             CC-CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhh
Q 020880            1 MS-KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQL   45 (320)
Q Consensus         1 m~-~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~   45 (320)
                      |. +|||.|.|+ |.+|+.++..|...|   + +|++.+++++..+.
T Consensus         1 M~~~~kI~VIGa-G~~G~~ia~~la~~g---~~~V~l~D~~~~~~~~   43 (317)
T 2ewd_A            1 MIERRKIAVIGS-GQIGGNIAYIVGKDN---LADVVLFDIAEGIPQG   43 (317)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHT---CCEEEEECSSSSHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCC---CceEEEEeCCchHHHH
Confidence            54 368999997 999999999999999   5 89999998766554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	320
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-35
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-28
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-27
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	4e-26
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-23
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	8e-23
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-22
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-22
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-20
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	1e-19
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-19
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	8e-19
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	6e-18
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	8e-18
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	2e-17
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-17
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	5e-14
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	5e-12
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	3e-11
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	6e-10
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	1e-09
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-08
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-06
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-06
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	8e-06
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	8e-06
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	1e-05
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-05
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	3e-05
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	4e-05
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	5e-05
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-05
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	6e-05
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	7e-05
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	1e-04
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-04
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	2e-04
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	4e-04
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	4e-04
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	7e-04
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	7e-04
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	8e-04
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	0.001
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	0.001
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	0.001
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	0.002
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.002
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	0.003
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	0.003
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	0.003
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	0.003
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	0.004
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	0.004
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	0.004

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (322), Expect = 2e-35
 Identities = 66/327 (20%), Positives = 124/327 (37%), Gaps = 38/327 (11%)

Query: 3   KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
           +KR+L+ GG G++G HL   L       ++V    +           + H     + +L 
Sbjct: 1   RKRILITGGAGFVGSHLTDKLMM---DGHEVTVVDN---FFTGRKRNVEHWIGHENFELI 54

Query: 63  SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
           +    D V   + + D + + A+ + P     +P   +  N   +L N L          
Sbjct: 55  NH---DVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL-NMLGLAKRVGAR- 109

Query: 123 LIHLSTDQVYEGVKSFYKEEDE------IAPVNVYGKSKVAAEKFIYEKCS----NFAIL 172
           L+  ST +VY   +   + ED       I P   Y + K  AE   Y           + 
Sbjct: 110 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 169

Query: 173 RSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTN 230
           R    +GP+      + +   +I   L +GE +  +    + R   YV D+V  ++AL N
Sbjct: 170 RIFNTFGPRMHMNDGRVVSN-FILQAL-QGEPLTVYGSGSQTRAFQYVSDLVNGLVALMN 227

Query: 231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADIS 290
             +S        +N+G P+  + ++ A+++  + G  + +        +      P    
Sbjct: 228 SNVSSP------VNLGNPEEHTILEFAQLIKNLVGSGSEIQF------LSEAQDDPQKRK 275

Query: 291 MDITKLVQTLNIDP-VTYKDGVKLTLA 316
            DI K    L  +P V  ++G+   + 
Sbjct: 276 PDIKKAKLMLGWEPVVPLEEGLNKAIH 302

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  108 bits (270), Expect = 7e-28
 Identities = 65/330 (19%), Positives = 121/330 (36%), Gaps = 40/330 (12%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-------STPLPQLLLDALPHS--FV 55
           R+LV GG G++G H ++ L       Y              +    +  L  +       
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLA---GAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLR 58

Query: 56  FFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSF 115
           F   D++       +A +    D +V+ AA S               NV  +    L   
Sbjct: 59  FVHGDIRD---AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQ-TLLQCA 114

Query: 116 TENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCS----NFA 170
            +     ++H+ST+QVY  + S  + E   + P + Y  SK  ++            +  
Sbjct: 115 VDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVR 174

Query: 171 ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVK-IILA 227
           I R    YGP      P+ L   ++ ++L  G  +  + D    R  V+  D  + I L 
Sbjct: 175 ITRCCNNYGPYQH---PEKLIPLFVTNLL-DGGTLPLYGDGANVREWVHTDDHCRGIALV 230

Query: 228 LTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPA 287
           L      E      + ++GG   ++  ++  ++ +  G   S ++ V+            
Sbjct: 231 LAGGRAGE------IYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGH-----DL 279

Query: 288 DISMDITKLVQTLNIDP-VTYKDGVKLTLA 316
             S+D  K+ + L   P V++ DG+  T+ 
Sbjct: 280 RYSLDGGKIERELGYRPQVSFADGLARTVR 309

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  106 bits (266), Expect = 4e-27
 Identities = 62/343 (18%), Positives = 130/343 (37%), Gaps = 43/343 (12%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHS--FVFFDVDL 61
           ++L+ GG G++G  +++ +  I+     V      T    L  L  +  S  + F   D+
Sbjct: 2   KILITGGAGFIGSAVVRHI--IKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADI 59

Query: 62  KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV------PSSLVNWLSSF 115
              +    +  +  QPD V++ AA S        P + +  N+            + S+ 
Sbjct: 60  CDSAEITRI-FEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSAL 118

Query: 116 TENKENL--LIHLSTDQVYEGVKSFYKEEDEI-----------APVNVYGKSKVAAEKFI 162
            E+K+N     H+STD+VY  +    + E+ +           AP + Y  SK +++  +
Sbjct: 119 GEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLV 178

Query: 163 YEKCSNF----AILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPV 216
                 +     +   S  YGP      P+ L    I + L +G+ +  +    + R  +
Sbjct: 179 RAWRRTYGLPTIVTNCSNNYGPYHF---PEKLIPLVILNAL-EGKPLPIYGKGDQIRDWL 234

Query: 217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSA 276
           YV D  + +  +     + +       N+GG +    + +   + ++             
Sbjct: 235 YVEDHARALHMVVTEGKAGE-----TYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYRE 289

Query: 277 --SSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLA 316
             + V          ++D  K+ + L   P  T++ G++ T+ 
Sbjct: 290 QITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVE 332

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  104 bits (259), Expect = 4e-26
 Identities = 66/352 (18%), Positives = 125/352 (35%), Gaps = 41/352 (11%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDV------AATHHSTPLPQLLLDALPHS--FV 55
           K  L+ G TG  G +L + L E   K Y+V      A++ ++  +  +  D    +  F 
Sbjct: 2   KVALITGVTGQDGSYLAEFLLE---KGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFH 58

Query: 56  FFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSS--LVNWLS 113
               DL   S    + L+  QPD V N  A+S   V    P+    ++   +  L+  + 
Sbjct: 59  LHYGDLSDTSNLTRI-LREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIR 117

Query: 114 SFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF--- 169
                K+      ST ++Y  V+    KE     P + Y  +K+ A         ++   
Sbjct: 118 FLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 177

Query: 170 -AILRSSIIYGP-QTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC-RCPVYVRDVVKIIL 226
                      P +  + V + +     +        +   + +  R   + +D VK+  
Sbjct: 178 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 237

Query: 227 ALTNRWLSED---------------KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLI 271
            +  +   ED               +     L +      + V+   +V  + G+    +
Sbjct: 238 MMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGV 297

Query: 272 KPVSAS-SVDRGVQSPADIS---MDITKLVQTLNIDP-VTYKDGVKLTLAAE 318
           KP     +VD     PA++     D TK  + L   P +T ++ V   +A +
Sbjct: 298 KPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAND 349

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 95.4 bits (236), Expect = 4e-23
 Identities = 62/337 (18%), Positives = 113/337 (33%), Gaps = 36/337 (10%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH----SFVFFDVD 60
           RVLV GG+GY+G H    L +     +DV    +     + +L  +         F + D
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQ---NGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGD 58

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
           +++ +    +       D V++ A L         P      NV  +L   +S+      
Sbjct: 59  IRNEALMTEILHDH-AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTL-RLISAMRAANV 116

Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIA--PVNVYGKSKVAAEKFIYEKC-----SNFAILR 173
              I  S+  VY         E      P + YGKSK+  E+ + +        + A+LR
Sbjct: 117 KNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLR 176

Query: 174 SSIIYGP-------QTISPVPKSLPIQWIDSVLSKGEKVEFF--HDECRCPVYVRDVVKI 224
                G        +    +P +L        + + + +  F           VRD + +
Sbjct: 177 YFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV 236

Query: 225 ILALTNRWLSEDKQMQL----LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD 280
           +       ++ +K        + N+G     S + +    ++  G      KPV+     
Sbjct: 237 MDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACG------KPVNYHFAP 290

Query: 281 RGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLA 316
           R          D +K  + LN     T  +  + T  
Sbjct: 291 RREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWH 327

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 94.7 bits (234), Expect = 8e-23
 Identities = 62/344 (18%), Positives = 111/344 (32%), Gaps = 42/344 (12%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAA----THHSTPLPQLLLDALPHSFVFFDV 59
           K VLV GG GY+G H +  L E     YD       ++ +      L     H   F++V
Sbjct: 2   KIVLVTGGAGYIGSHTVVELIE---NGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEV 58

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
           DL    G + V  ++ + D V++ A L         P      N+  ++V        N 
Sbjct: 59  DLCDRKGLEKVFKEY-KIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNV 117

Query: 120 ENLLIHLSTDQVYEGVKSF----YKEEDEIAPVNVYGKSKVAAEKFIYEKCS------NF 169
              +   S     +  +        EE  + P N YG +K A E  + +  +       F
Sbjct: 118 SKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKF 177

Query: 170 AILRSSIIYGP-------QTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRD 220
           AILR     G        +    +P +L        + + EK+  F D  + R    +RD
Sbjct: 178 AILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRD 237

Query: 221 VVKIILALTNRWLSEDKQMQ--------LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIK 272
            + ++        +                 N+G     +  ++     +  G       
Sbjct: 238 YIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASG------I 291

Query: 273 PVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTL 315
            +      R      +++    +  + L     +  +D  K   
Sbjct: 292 DLPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLW 335

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.7 bits (234), Expect = 1e-22
 Identities = 50/344 (14%), Positives = 107/344 (31%), Gaps = 32/344 (9%)

Query: 3   KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAA---------THHSTPLPQLLLDALPHS 53
           +   L+ G TG  G +L + L E   K Y+V           T     L +     +  +
Sbjct: 1   RNVALITGITGQDGSYLAEFLLE---KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN 57

Query: 54  FVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSL--VNW 111
                 DL   +    +  +    ++    A   V     +  +    ++   +L  ++ 
Sbjct: 58  MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKI-SFDLAEYTADVDGVGTLRLLDA 116

Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF- 169
           + +            ST ++Y  V+    KE     P + YG +K+ A   +      + 
Sbjct: 117 VKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYN 176

Query: 170 ---AILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKI 224
                        P+  +        + +  +     +     +    R   + +D V+ 
Sbjct: 177 LFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEA 236

Query: 225 ILALTNRWLSEDK--QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASS---- 278
           +  +      ED       + +V      S + + + +         + +          
Sbjct: 237 MWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVT 296

Query: 279 VDRGVQSPADI---SMDITKLVQTLNIDP-VTYKDGVKLTLAAE 318
           VD     P ++     D TK  Q LN  P V + + V+  + A+
Sbjct: 297 VDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHAD 340

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 93.1 bits (230), Expect = 3e-22
 Identities = 54/334 (16%), Positives = 102/334 (30%), Gaps = 39/334 (11%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAA--THHSTPLPQLLLDALPHSFVFFDVDL 61
           K ++V GG G++G + +  +         V              L   L         D+
Sbjct: 3   KNIIVTGGAGFIGSNFVHYVYN-NHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDI 61

Query: 62  KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVN----------- 110
                 + V     + D +V+ AA S      NDP   +  N   +              
Sbjct: 62  AD---AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRF 118

Query: 111 WLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF- 169
              S  E   +L +        EG    +  E    P + Y  +K A++  +     +F 
Sbjct: 119 HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFG 178

Query: 170 ---AILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKI 224
               I   S  YGP           I  I      G K + + +    R  ++  D    
Sbjct: 179 VKATISNCSNNYGPYQHIEKFIPRQITNI----LAGIKPKLYGEGKNVRDWIHTNDHSTG 234

Query: 225 ILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQ 284
           + A+  +    +  +            +  ++ E++ E  G        V+  +      
Sbjct: 235 VWAILTKGRMGETYLIGADG-----EKNNKEVLELILEKMGQPKDAYDHVTDRAGH---- 285

Query: 285 SPADISMDITKLVQTLNIDP--VTYKDGVKLTLA 316
                ++D +KL   L   P    + +G++ T+ 
Sbjct: 286 -DLRYAIDASKLRDELGWTPQFTDFSEGLEETIQ 318

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 88.1 bits (217), Expect = 2e-20
 Identities = 62/326 (19%), Positives = 111/326 (34%), Gaps = 15/326 (4%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPY--DVAATHHSTPLPQLLLDALPHSFVFFD 58
              K  L+ G  G++G +LL+ L +++ K    D  AT H   L ++        +  F 
Sbjct: 14  AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK 73

Query: 59  VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
                    D         D V++ AAL       NDP ++ + N+   L N L +  + 
Sbjct: 74  FIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFL-NMLIAARDA 132

Query: 119 KENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFI--YEKCSNF--AILR 173
           K     + ++   Y         E+    P++ Y  +K   E +   + +C  F    LR
Sbjct: 133 KVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLR 192

Query: 174 SSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNR 231
              ++G +       +  I    S + +G+ V    D    R   Y+ + V+   A    
Sbjct: 193 YFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ---ANLLA 249

Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM 291
             +       + N+    R S  Q+   + +       +         D           
Sbjct: 250 ATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLA-ENGVSYHREPVYRDFREGDVRHSLA 308

Query: 292 DITKLVQTLNIDP-VTYKDGVKLTLA 316
           DI+K  + L   P      GV L + 
Sbjct: 309 DISKAAKLLGYAPKYDVSAGVALAMP 334

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 84.9 bits (208), Expect = 1e-19
 Identities = 56/311 (18%), Positives = 112/311 (36%), Gaps = 37/311 (11%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
           ++L+ G  G LG+ + + L     K  +V                        D+D+ + 
Sbjct: 3   KILITGANGQLGREIQKQLKG---KNVEV------------------IPTDVQDLDITNV 41

Query: 65  SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
              +       +P+VV+NCAA +    CE   D A  IN         ++++   E + I
Sbjct: 42  LAVNKF-FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQI 100

Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
                   E  K    E DE+ P + YGK+K+  E F+      + I+R++ +YG     
Sbjct: 101 STDYVFDGE-AKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNN- 158

Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
                  ++ + ++    ++++  HD+   P    D+ ++           D++     +
Sbjct: 159 ------FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARV------VLKVIDEKNYGTFH 206

Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
                  S    A  +  + G     + P +     R  + P    +    L  T     
Sbjct: 207 CTCKGICSWYDFAVEIFRLTGIDVK-VTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDIT 265

Query: 305 VTYKDGVKLTL 315
             +K+ +K  +
Sbjct: 266 REWKESLKEYI 276

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 84.9 bits (209), Expect = 2e-19
 Identities = 51/338 (15%), Positives = 112/338 (33%), Gaps = 52/338 (15%)

Query: 2   SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
           +K+RV + G  G +G  + + L +   +               L+L          +++L
Sbjct: 1   AKQRVFIAGHRGMVGSAIRRQLEQ---RGDVE-----------LVLRTRD------ELNL 40

Query: 62  KSGSGFDAVALKFGQPDVVVNCA-ALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
                         + D V   A  +         P   +  N+     N + +  +N  
Sbjct: 41  LDSRAVHDF-FASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIES-NIIHAAHQNDV 98

Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEI------APVNVYGKSKVAAEKFIYEKCS----NFA 170
           N L+ L +  +Y  +      E E+           Y  +K+A  K           ++ 
Sbjct: 99  NKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYR 158

Query: 171 ILRSSIIYGP-----QTISPVPKSLPIQWIDSVLSKGEKVEFF------HDECRCPVYVR 219
            +  + +YGP      + S V  +L  ++ ++   K   V  +       +         
Sbjct: 159 SVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAA 218

Query: 220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSV 279
             + ++      WL   + M   +NVG     +  ++A+ +A++ GY    +   ++   
Sbjct: 219 ASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYK-GRVVFDASKPD 277

Query: 280 DRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLA 316
                      +D+T+L   L     ++ + G+  T  
Sbjct: 278 G-----TPRKLLDVTRL-HQLGWYHEISLEAGLASTYQ 309

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.6 bits (205), Expect = 8e-19
 Identities = 60/342 (17%), Positives = 110/342 (32%), Gaps = 35/342 (10%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-------PHS 53
           M++K VLV GG GY+G H +  L E    P  +   H++      L ++L         S
Sbjct: 1   MAEK-VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRS 59

Query: 54  FVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLS 113
             F ++D+        +  K+     V++ A L         P     +N+  ++     
Sbjct: 60  VEFEEMDILDQGALQRLFKKY-SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEI 118

Query: 114 SFTEN-KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCS----- 167
                 K  +    +T           +        N YGKSK   E+ I + C      
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178

Query: 168 NFAILRSSIIYGP-------QTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYV 218
           N  +LR     G        +    +P +L        + + E +  F +  +      V
Sbjct: 179 NAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238

Query: 219 RDVVKIILALTNRWLSEDKQM----QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPV 274
           RD + ++        +  K        + N+G     S +QM + + +  G      K +
Sbjct: 239 RDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASG------KKI 292

Query: 275 SASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTL 315
               V R     A    + +   + L     +      +   
Sbjct: 293 PYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLW 334

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 80.8 bits (198), Expect = 6e-18
 Identities = 45/327 (13%), Positives = 102/327 (31%), Gaps = 25/327 (7%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           +  LV G TG  G +L + L E   + + + A   S    +L    +     + D D+  
Sbjct: 1   RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60

Query: 64  GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
                   +K    +V    A   V         + +   +   + + L +  +      
Sbjct: 61  ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGL--GVTHLLEAIRQFSPETR 118

Query: 124 IHLSTDQVYEGVKS--FYKEEDEIAPVNVYGKSKVAAEKFIY----EKCSNFAILRSSII 177
            + ++     G+       E     P + YG +K+               + +       
Sbjct: 119 FYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNH 178

Query: 178 YGPQT-ISPVPKSLPIQWIDSVLSKGEKVEFFHDEC-RCPVYVRDVVKIILALTNRWLSE 235
             P   I  V + +        L K +++   + +  R   +  D V+ +  +  +  ++
Sbjct: 179 ESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKAD 238

Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI---SMD 292
           D        V      +   M ++  E  G             +D     PA++     +
Sbjct: 239 DY------VVATGVTTTVRDMCQIAFEHVGLDYRDFLK-----IDPAFFRPAEVDVLLGN 287

Query: 293 ITKLVQTLNIDP-VTYKDGVKLTLAAE 318
             K  + L   P  +  + +++ + A+
Sbjct: 288 PAKAQRVLGWKPRTSLDELIRMMVEAD 314

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 80.0 bits (195), Expect = 8e-18
 Identities = 62/316 (19%), Positives = 118/316 (37%), Gaps = 30/316 (9%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
            +L+ G TG +G  L + L+        +A   HS                 F  D  + 
Sbjct: 2   NILLFGKTGQVGWELQRSLAP---VGNLIALDVHSK---------------EFCGDFSNP 43

Query: 65  SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
            G     ++  +PDV+VN AA +     E++P+ A  +N  S       +  E    ++ 
Sbjct: 44  KGVAET-VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIA-KAANETGAWVVH 101

Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
           + +           ++E D  +P+NVYGK+K+A EK + + C    I R+S +Y  +  +
Sbjct: 102 YSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNN 161

Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
                   + +  +  + + +   +D+   P     +           L++ +   L   
Sbjct: 162 F------AKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHL 215

Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSL----IKPVSASSVDRGVQSPADISMDITKLVQTL 300
           V G         A V  E R    +L    +  V  S+       P +  ++  K  +  
Sbjct: 216 VAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNF 275

Query: 301 NIDPVTYKDGVKLTLA 316
           ++    ++ GVK  L 
Sbjct: 276 DLILPQWELGVKRMLT 291

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 79.7 bits (195), Expect = 2e-17
 Identities = 51/336 (15%), Positives = 98/336 (29%), Gaps = 38/336 (11%)

Query: 3   KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDV---------AATHHSTPLPQLLLDALPHS 53
           +K  L+ G TG  G +L + L     K Y+V           T     +     +     
Sbjct: 1   RKIALITGITGQDGSYLTEFLLG---KGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKAL 57

Query: 54  FVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLS 113
                 DL   S      +   +PD V N AA S   V    PD    +    +L    +
Sbjct: 58  MKLHYADLTDASSLRRW-IDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEA 116

Query: 114 ----SFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF 169
               +    +        + +++        E     P + Y  SK AA  +       +
Sbjct: 117 VRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 176

Query: 170 ----AILRSSIIYGP-QTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC-RCPVYVRDVVK 223
                         P +  + V + +        +    K+   + +  R   +  D V+
Sbjct: 177 GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE 236

Query: 224 IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGV 283
            +       L ++K              +             +    +       +D+  
Sbjct: 237 AM----WLMLQQEK-------PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRY 285

Query: 284 QSPADI---SMDITKLVQTLNIDP-VTYKDGVKLTL 315
             PA++     D +K  + L   P V ++  VK+ +
Sbjct: 286 FRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMV 321

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 79.6 bits (195), Expect = 2e-17
 Identities = 59/333 (17%), Positives = 110/333 (33%), Gaps = 39/333 (11%)

Query: 1   MSKK-RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
            S+  ++ + G  G++  H+ + L     + + V A+          +        F  V
Sbjct: 12  PSENLKISITGAGGFIASHIARRLKH---EGHYVIASDW---KKNEHMTEDMFCDEFHLV 65

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
           DL+     +         D V N AA            S +  N      N + +   N 
Sbjct: 66  DLRV---MENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING 122

Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEI--------APVNVYGKSKVAAEKFIYEKCS---- 167
                + S+  +Y   K        +         P + +G  K+A E+           
Sbjct: 123 IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGI 182

Query: 168 NFAILRSSIIYGP-QTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKI 224
              I R   IYGP  T     +  P  +     +  ++ E + D  + R   ++ + V+ 
Sbjct: 183 ECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG 242

Query: 225 ILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQ 284
           +L LT     E       +N+G  + VS  +MAE+V         +        V     
Sbjct: 243 VLRLTKSDFREP------VNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRG--- 293

Query: 285 SPADISMDITKLVQTLNIDP-VTYKDGVKLTLA 316
                + D   + + L   P +  K+G+++T  
Sbjct: 294 ----RNSDNNLIKEKLGWAPNMRLKEGLRITYF 322

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 69.4 bits (168), Expect = 5e-14
 Identities = 52/343 (15%), Positives = 113/343 (32%), Gaps = 44/343 (12%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHS--FVFFDVDL 61
           ++L+ GG G+LG +L         +  D+    + S       L  L     F F   D+
Sbjct: 2   KLLITGGCGFLGSNLASFALS---QGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDI 58

Query: 62  KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
           ++ +    +  K+  PD   + A         ++P     INV  +L    +    N   
Sbjct: 59  RNKNDVTRLITKY-MPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNC 117

Query: 122 LLIHLSTDQVYE-----------------GVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE 164
            +I+ ST++VY                     + Y E  ++   + YG SK AA++++ +
Sbjct: 118 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 177

Query: 165 KCSNFAILRSSIIYGPQTI--------SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV 216
               F +      +                      + ++      +      +  +   
Sbjct: 178 YARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 237

Query: 217 YV---RDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP 273
            +     +     AL N  +S+ +     +     + +S +++ +++ +           
Sbjct: 238 VLHAEDMISLYFTALAN--VSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTN- 294

Query: 274 VSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTL 315
                +            DI K+   ++  P V+ KDGV+   
Sbjct: 295 -----LPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMY 332

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 63.3 bits (152), Expect = 5e-12
 Identities = 51/342 (14%), Positives = 95/342 (27%), Gaps = 40/342 (11%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP----LPQLLLDALPHSFVFFDV 59
             VLV G  G++  H+++ L E     Y V  T  S      L +      P  F    V
Sbjct: 12  SLVLVTGANGFVASHVVEQLLE---HGYKVRGTARSASKLANLQKRWDAKYPGRFETAVV 68

Query: 60  -DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVP------------- 105
            D+     +D V         + +  + S        P    ++N               
Sbjct: 69  EDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFV 128

Query: 106 --SSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI- 162
             SS V+ L      +   L   S +           E D    + VY  SK  AE    
Sbjct: 129 LTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAW 188

Query: 163 -----YEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY 217
                 +       +  +   G              W+ S+ +            +  V 
Sbjct: 189 KFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVS 248

Query: 218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSAS 277
             D+  + L        E ++       G         +     ++        K   A 
Sbjct: 249 AVDIGLLHLGCLVLPQIERRR-----VYGTAGTFDWNTVLATFRKLYPS-----KTFPAD 298

Query: 278 SVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLAAE 318
             D+G       +    +++++L      + ++ +K  + +E
Sbjct: 299 FPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSE 340

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 61.0 bits (146), Expect = 3e-11
 Identities = 41/297 (13%), Positives = 92/297 (30%), Gaps = 36/297 (12%)

Query: 2   SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDV-AATHHSTPLPQLLLDALPHSFVFFDVD 60
           S+ R+L++G TGY+G+H+ +   +     +        ST         L  SF     +
Sbjct: 2   SRSRILLIGATGYIGRHVAKASLD---LGHPTFLLVRESTASSNSEKAQLLESFKASGAN 58

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
           +  GS  D  +L     +V V  + +   ++            V +    + S F  +  
Sbjct: 59  IVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGND-- 116

Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
                                   + P     + K    + I  +   +  + S+   G 
Sbjct: 117 ------------------VDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAG- 157

Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
                  +SL    + +       +    +     V   D+    +   +   + +K + 
Sbjct: 158 ----YFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLY 213

Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQS---PADISMDIT 294
                   + +S  ++  +  +    +      V    V + +     PA+IS+ I+
Sbjct: 214 ---LRLPANTLSLNELVALWEKKIDKTLE-KAYVPEEEVLKLIADTPFPANISIAIS 266

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 57.1 bits (136), Expect = 6e-10
 Identities = 33/263 (12%), Positives = 74/263 (28%), Gaps = 25/263 (9%)

Query: 3   KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
           K RVL+VGGTGY+G+ ++          +          +  +    +   F      L 
Sbjct: 3   KSRVLIVGGTGYIGKRIVNASIS---LGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI 59

Query: 63  SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
             S  D   L      V V  +AL+   +  +  +              + +  E     
Sbjct: 60  EASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLK----------LVEAIKEAGNIK 109

Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
               S   +          E  + P ++    K    + I      +  + S++  G   
Sbjct: 110 RFLPSEFGMDP-----DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGY-- 162

Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
                    +            +    +     V   DV    +   +   + +K    +
Sbjct: 163 --FAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKT---M 217

Query: 243 LNVGGPDRVSRVQMAEVVAEIRG 265
                 + +S+ ++ ++   +  
Sbjct: 218 YIRPPMNILSQKEVIQIWERLSE 240

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 55.6 bits (132), Expect = 1e-09
 Identities = 26/265 (9%), Positives = 63/265 (23%), Gaps = 21/265 (7%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
             VLV G +G  GQ + + L E     +       S    + +                 
Sbjct: 4   PTVLVTGASGRTGQIVYKKLKE-GSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSI 62

Query: 64  GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
              F  +         V        P               P  +         +   + 
Sbjct: 63  NPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA 122

Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
                  V     +                 K  AE+++ +  + + I+R+  +      
Sbjct: 123 GVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDK--- 179

Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
                       + ++ K +++          V   DV ++ +      L  ++      
Sbjct: 180 -------EGGVRELLVGKDDELLQTD---TKTVPRADVAEVCIQA----LLFEEAKNKAF 225

Query: 244 NVGGPD---RVSRVQMAEVVAEIRG 265
           ++G               + +++  
Sbjct: 226 DLGSKPEGTSTPTKDFKALFSQVTS 250

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 52.9 bits (125), Expect = 2e-08
 Identities = 62/378 (16%), Positives = 106/378 (28%), Gaps = 73/378 (19%)

Query: 2   SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDV--------------------AATHHSTP 41
           S  RVLV GG GY+G H ++ L  +    + V                            
Sbjct: 1   SHMRVLVCGGAGYIGSHFVRAL--LRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQ 58

Query: 42  LPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMS 101
                             D+++    + V  + G  D VV+  A         DP     
Sbjct: 59  SDGPKPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYD 118

Query: 102 INVPSSLVNWLSSFTENKENLLIHLS-------TDQVYEGVKSFYKEEDEIAPVNVYGKS 154
            NV   L    +      + ++   S       T               + +P + YG+S
Sbjct: 119 NNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGES 178

Query: 155 KVAAEKFIYEKCSNFAI----LRSSIIYG------------------PQTISPVPKSLPI 192
           K+ AE+ I +    + I    LR     G                  P  +  V   +  
Sbjct: 179 KLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAP 238

Query: 193 Q---WIDSVLSKGEKVEFFHDEC--------RCPVYVRDVVKIILALTNRWLSEDKQMQL 241
                I    S  +++  F  +         R  V+V D+    +   +         + 
Sbjct: 239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKS 298

Query: 242 ----LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
               + N+G     S  ++ EV  +  G       P+      R    PA +     K  
Sbjct: 299 KYFSVFNLGTSRGYSVREVIEVARKTTG------HPIPVRECGRREGDPAYLVAASDKAR 352

Query: 298 QTLNIDP-VTYKDGVKLT 314
           + L   P     + +  T
Sbjct: 353 EVLGWKPKYDTLEAIMET 370

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (109), Expect = 1e-06
 Identities = 23/228 (10%), Positives = 55/228 (24%), Gaps = 40/228 (17%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
           M+ K++ + G TG  G   L    +     Y+V      +                  V 
Sbjct: 1   MAVKKIAIFGATGQTGLTTLAQAVQ---AGYEVTVLVRDSS------RLPSEGPRPAHVV 51

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
           +        V       D V+               D + +  +     N +++   +  
Sbjct: 52  VGDVLQAADVDKTVAGQDAVIVLLG--------TRNDLSPTTVMSEGARNIVAAMKAHGV 103

Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
           + ++  ++  +       +        +       +   K + E    +  +        
Sbjct: 104 DKVVACTSAFLL------WDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVM------- 150

Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
                     P    D  L+    V          +   D+   +L  
Sbjct: 151 ----------PPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRC 188

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (108), Expect = 1e-06
 Identities = 36/245 (14%), Positives = 70/245 (28%), Gaps = 34/245 (13%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
           M  K V ++G +G  G+ LL+ + E +G    V                  +  V     
Sbjct: 12  MQNKSVFILGASGETGRVLLKEILE-QGLFSKVTLIGRRKLTFDEEAYKNVNQEVVD--- 67

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
                 F+ +                      +   +  + ++    L +   +     +
Sbjct: 68  ------FEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCK 121

Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVA-AEKFIYEKCSNFAILRSSIIYG 179
           +  +  S                      +Y + K     K    K   +++ R  ++  
Sbjct: 122 HFNLLSSKGADKS-------------SNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLC 168

Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
            +  S   + L ++     L                V V  VV+ +L    R    DKQM
Sbjct: 169 DRQESRPGEWL-VRKFFGSLPDSWAS-------GHSVPVVTVVRAMLNNVVR--PRDKQM 218

Query: 240 QLLLN 244
           +LL N
Sbjct: 219 ELLEN 223

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 44.1 bits (104), Expect = 8e-06
 Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 12/110 (10%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDALPHSFVFFDVDLK 62
           K  ++ GG   +G+ + +  +  EG   D+A       P  +  +  L    +    D+ 
Sbjct: 6   KLAVITGGANGIGRAIAERFAV-EG--ADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS 62

Query: 63  SGSG----FDAVALKFGQPDVVVNCAALSVP----RVCENDPDSAMSINV 104
                      V   FG+ D++VN A +        +          INV
Sbjct: 63  QPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINV 112

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 44.1 bits (103), Expect = 8e-06
 Identities = 21/117 (17%), Positives = 38/117 (32%), Gaps = 12/117 (10%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
           MS   V+V G    +G  L+Q L + +     + AT         L            + 
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVK-DKNIRHIIATARDVEKATELKSIKDSRVHVLPLT 59

Query: 61  LKSGSGFDAVALK----FGQP--DVVVNCAALSVPRVCENDPDSA-----MSINVPS 106
           +      D    K     G     +++N A + +      +P+ A     + +N  S
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTS 116

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 43.7 bits (103), Expect = 1e-05
 Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           K VLV GG   +G+ + Q  +  EG    VA         ++  +A+  +F   D++ + 
Sbjct: 6   KGVLVTGGARGIGRAIAQAFAR-EG--ALVALCDLRPEGKEVA-EAIGGAFFQVDLEDER 61

Query: 64  G--SGFDAVALKFGQPDVVVNCAALSVP----RVCENDPDSAMSINV 104
                 +  A   G+ DV+VN AA++ P     V   +    + +N+
Sbjct: 62  ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNL 108

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 42.2 bits (98), Expect = 2e-05
 Identities = 12/105 (11%), Positives = 30/105 (28%), Gaps = 6/105 (5%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH-SFVFFDV 59
           +  K+ +V+ GTG +G      L+    +                 ++     +    + 
Sbjct: 21  VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAET 80

Query: 60  DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV 104
                    + A        V    A+ +  + +    +  SI +
Sbjct: 81  A-----DDASRAEAVKGAHFVFTAGAIGLELLPQAAWQNESSIEI 120

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 42.1 bits (97), Expect = 3e-05
 Identities = 36/230 (15%), Positives = 66/230 (28%), Gaps = 38/230 (16%)

Query: 2   SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
           + KRVL+ G TG  G+HLL  +   E     V A      L +      P   +   +  
Sbjct: 1   TPKRVLLAGATGLTGEHLLDRILS-EPTLAKVIAPARK-ALAEHPRLDNPVGPLAELLPQ 58

Query: 62  KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
             GS            D    C   ++      +   A+  ++P ++             
Sbjct: 59  LDGS-----------IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYL 107

Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
           ++  L  D       +  K E E              +    +      I R S+++GP+
Sbjct: 108 VVSALGADAKSSIFYNRVKGELE--------------QALQEQGWPQLTIARPSLLFGPR 153

Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
                   +    I  +L                +   D+ + +  L   
Sbjct: 154 E-EFRLAEILAAPIARILPGKYH----------GIEACDLARALWRLALE 192

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.9 bits (98), Expect = 4e-05
 Identities = 25/105 (23%), Positives = 38/105 (36%), Gaps = 8/105 (7%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
            R LV G    +G+  ++ L    G    V A   +      L    P       VDL  
Sbjct: 6   LRALVTGAGKGIGRDTVKALHA-SG--AKVVAVTRTNSDLVSLAKECP-GIEPVCVDLGD 61

Query: 64  GSGFDAVALKFGQPDVVVNCAALSVP----RVCENDPDSAMSINV 104
               +      G  D++VN AAL +      V +   D + S+N+
Sbjct: 62  WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNL 106

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 41.9 bits (98), Expect = 5e-05
 Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 11/116 (9%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP----LPQLLLDALPHSFVFFDV 59
           +  LV GG+  LG  + QGL+E  G    V     +        Q L +      + F  
Sbjct: 6   RVALVTGGSRGLGFGIAQGLAE-AG--CSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 60  DLKSGSG----FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNW 111
           D+ +        +AV  KFG+ D VVN A ++     E  P       +  +L   
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGT 118

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 5/99 (5%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           K VL+ G    +G+  L+  ++ EG    + A        +   +A+    V  DV   +
Sbjct: 6   KAVLITGAAHGIGRATLELFAK-EG--ARLVACDIEEGPLREAAEAVGAHPVVMDVADPA 62

Query: 64  G--SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAM 100
               GF       G+ D VV+ A ++        P    
Sbjct: 63  SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDW 101

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 41.5 bits (97), Expect = 6e-05
 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           K  LV GG   +G  +++ L   EG    VA +  +    Q L   L    +F   D+ S
Sbjct: 7   KVALVTGGASGVGLEVVKLLLG-EG--AKVAFSDINEAAGQQLAAELGERSMFVRHDVSS 63

Query: 64  GSG----FDAVALKFGQPDVVVNCAALSVP-RVCENDPD 97
            +       AV  + G  +V+VN A + +P  +     +
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLE 102

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 41.2 bits (96), Expect = 7e-05
 Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 7/98 (7%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           K  LV GG   +G   ++ +   EG    V          + +   L  +  +  +D+  
Sbjct: 7   KVALVSGGARGMGASHVRAMVA-EG--AKVVFGDILDEEGKAMAAELADAARYVHLDVTQ 63

Query: 64  GSG----FDAVALKFGQPDVVVNCAALSVPRVCENDPD 97
            +      D     FG   V+VN A +      E+   
Sbjct: 64  PAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYAL 101

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 41.2 bits (95), Expect = 1e-04
 Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 4/104 (3%)

Query: 3   KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDV-AATHHSTPLPQLLLDALPHSFVFFDVDL 61
           KK + VVG TG  G  L++  +      + V A  H    L    L A+P+  +F    L
Sbjct: 3   KKTIAVVGATGRQGASLIRVAAA---VGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLL 59

Query: 62  KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVP 105
            +    D +        +     A     + ++  D+A      
Sbjct: 60  NNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTI 103

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 25/161 (15%), Positives = 53/161 (32%), Gaps = 14/161 (8%)

Query: 1   MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
           +  K VLV+  +  +G+ +   LS+ EG   +V     +    + LL    H +V  D+ 
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQ-EG--AEVTICARN----EELLKRSGHRYVVCDLR 54

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
                  D +  K  + D++V  A        +   +      +      +L+     + 
Sbjct: 55  ----KDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAID---SLFLNMIKIVRN 107

Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKF 161
            L              + +     I  +     +++A   F
Sbjct: 108 YLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGF 148

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 40.2 bits (92), Expect = 2e-04
 Identities = 47/332 (14%), Positives = 103/332 (31%), Gaps = 31/332 (9%)

Query: 3   KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFDVD 60
            KRV V G TG+ G  L   L         V     + P    L +    +        D
Sbjct: 8   GKRVFVTGHTGFKGGWLSLWLQT---MGATVKGYSLTAPTVPSLFETARVADGMQSEIGD 64

Query: 61  LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
           ++        +++  QP++V + AA  + R+  ++P    S NV  ++    +       
Sbjct: 65  IRD-QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGV 123

Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEI--APVNVYGKSKVAAEKFIYEKC------------ 166
             ++++++D+ Y+  +  +   +       + Y  SK  AE                   
Sbjct: 124 KAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQH 183

Query: 167 -SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII 225
            +  A +R+  + G          +    + +       +       R   +V + +   
Sbjct: 184 GTAVATVRAGNVIGGGDW--ALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGY 241

Query: 226 LALTNRWLSEDKQM--QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGV 283
           L L  +  ++  +            D      + E + +  G   S     +A   +   
Sbjct: 242 LLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHE--- 298

Query: 284 QSPADISMDITKLVQTLNIDP-VTYKDGVKLT 314
                + +D +K    L   P       ++  
Sbjct: 299 --AHYLKLDCSKAKMQLGWHPRWNLNTTLEYI 328

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 40.3 bits (92), Expect = 2e-04
 Identities = 46/337 (13%), Positives = 103/337 (30%), Gaps = 33/337 (9%)

Query: 5   RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAA-THHSTPLPQLLLDALPHSFVFFDVDLKS 63
           RVL++G  G++G HL + L  +    Y+V      S  + + L       F F + D+  
Sbjct: 2   RVLILGVNGFIGNHLTERL--LREDHYEVYGLDIGSDAISRFLNHP---HFHFVEGDISI 56

Query: 64  GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLV------NWLSSFTE 117
            S +    +K  + DVV+   A++ P     +P     ++   +L        +      
Sbjct: 57  HSEWIEYHVK--KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 114

Query: 118 NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
              + +  + +D+ ++   S         P  +Y  SK   ++ I+       +  +   
Sbjct: 115 PSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFR 174

Query: 178 YGP---------QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
                                   Q I +++           + +            L  
Sbjct: 175 PFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYR 234

Query: 229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIK---------PVSASSV 279
                      +++      +  S  ++ E++                       S+S  
Sbjct: 235 IIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYY 294

Query: 280 DRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTL 315
            +G Q        I    + L+ +P +  ++ +  TL
Sbjct: 295 GKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETL 331

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 39.2 bits (91), Expect = 4e-04
 Identities = 23/114 (20%), Positives = 37/114 (32%), Gaps = 16/114 (14%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           + VL+ GG   LG+ L+      EG    VA    S      L      + +    D++S
Sbjct: 6   EAVLITGGASGLGRALVDRFVA-EG--AKVAVLDKSAERLAELETDHGDNVLGIVGDVRS 62

Query: 64  GSG----FDAVALKFGQPDVVVNCAALSVP---------RVCENDPDSAMSINV 104
                        +FG+ D ++  A +               +   D    INV
Sbjct: 63  LEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINV 116

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 4/97 (4%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           +RVLV G    +G+  +Q L    G    V A   +      L+   P       VDL  
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHA-TG--ARVVAVSRTQADLDSLVRECP-GIEPVCVDLGD 63

Query: 64  GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAM 100
               +      G  D++VN AA+++ +        A 
Sbjct: 64  WEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAF 100

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 38.1 bits (88), Expect = 7e-04
 Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 10/101 (9%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP---HSFVFFDVD 60
           K  ++ G    +G+ +    +   G    V  +  +      ++D +            D
Sbjct: 12  KCAIITGAGAGIGKEIAITFAT-AG--ASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 61  LKSGSGFDA----VALKFGQPDVVVNCAALSVPRVCENDPD 97
           + S     A       K G+ D++VN A    P+  +    
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMA 109

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 38.1 bits (88), Expect = 7e-04
 Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 9/100 (9%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFDVDL 61
           K  ++ GGT  +G  +     E EG    V  T   + + +    ++  P    FF  D 
Sbjct: 7   KVAIITGGTLGIGLAIATKFVE-EG--AKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS 63

Query: 62  KSGSG----FDAVALKFGQPDVVVNCAALSVPRVCENDPD 97
               G    FDA    FG    +VN A ++V +  E    
Sbjct: 64  SDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTT 103

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 38.1 bits (88), Expect = 8e-04
 Identities = 24/113 (21%), Positives = 38/113 (33%), Gaps = 15/113 (13%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP---HSFVFFDVD 60
              LV GG+  +G  +++ L+   G    V     +       L               D
Sbjct: 9   CTALVTGGSRGIGYGIVEELAS-LG--ASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65

Query: 61  LKSGSG----FDAVALKFGQP-DVVVNCAALSVPR----VCENDPDSAMSINV 104
           L S S      + VA  F    +++VN A + + +        D    MSIN 
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINF 118

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 18/101 (17%), Positives = 29/101 (28%), Gaps = 7/101 (6%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           K V++ GG   LG    +      G    V                L  +  +  +D+  
Sbjct: 6   KTVIITGGARGLGAEAARQAVA-AG--ARVVLADVLDEEGAATARELGDAARYQHLDVTI 62

Query: 64  GSG----FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAM 100
                        +FG  D +VN A +S     E +     
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERF 103

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 37.8 bits (87), Expect = 0.001
 Identities = 21/101 (20%), Positives = 35/101 (34%), Gaps = 7/101 (6%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
           K +LV G    +G+  L   +  EG    + A      L    + AL    +    D+  
Sbjct: 6   KTILVTGAASGIGRAALDLFAR-EG--ASLVAVDREERLLAEAVAALEAEAIAVVADVSD 62

Query: 64  GSG----FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAM 100
                  F     +FG+   V + A ++   +  N P  A 
Sbjct: 63  PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAW 103

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (86), Expect = 0.001
 Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 16/114 (14%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFD 58
           +  LV G +G +G  + + L + +G    V     +    + L         P + + + 
Sbjct: 11  RLALVTGASGGIGAAVARALVQ-QG--LKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67

Query: 59  VDLKSGSG----FDAVALKFGQPDVVVNCAALSVP----RVCENDPDSAMSINV 104
            DL +       F A+  +    D+ +N A L+ P        +      ++NV
Sbjct: 68  CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNV 121

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 29/170 (17%), Positives = 58/170 (34%), Gaps = 16/170 (9%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL------PHSFVFF 57
           K  ++ G +  +G+      +  EG    V  T       +     +        +    
Sbjct: 6   KVAIITGSSNGIGRATAVLFAR-EG--AKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62

Query: 58  DVDLKSGSG----FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSL--VNW 111
             D+ + +G          KFG+ D++VN A  ++P   ++   +A SI    +   +N 
Sbjct: 63  VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPD-SQSKTGTAQSIESYDATLNLNL 121

Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKF 161
            S     K+ +    ST      + S             Y  +K A +++
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQY 171

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.9 bits (83), Expect = 0.002
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)

Query: 4  KRVLVVGGTGYLGQHLLQGLSEIEGKPYDV 33
           RV+V+GG GY G      LS+   K Y+V
Sbjct: 2  SRVMVIGGDGYCGWATALHLSK---KNYEV 28

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 20/106 (18%), Positives = 34/106 (32%), Gaps = 11/106 (10%)

Query: 6   VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG- 64
            +V     + G      LSE  G  + VA    S      L +A   ++       +   
Sbjct: 3   AIVTNVKHFGGMGSALRLSE-AG--HTVACHDESFKQKDEL-EAFAETYPQLKPMSEQEP 58

Query: 65  -SGFDAVALKFGQPDVVVNCAALSVP-----RVCENDPDSAMSINV 104
               +AV   +GQ DV+V+    +       +    D   A+    
Sbjct: 59  AELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQ 104

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 36.1 bits (83), Expect = 0.003
 Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 13/96 (13%)

Query: 4  KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL------PHSFVFF 57
          K V++ G +  +G+      ++ EG   +V  T  S+   +     +             
Sbjct: 6  KTVIITGSSNGIGRTTAILFAQ-EG--ANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62

Query: 58 DVDLKSGSG----FDAVALKFGQPDVVVNCAALSVP 89
            D+ +  G     ++   +FG+ DV+VN A  ++P
Sbjct: 63 VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIP 98

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 0.003
 Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 16/110 (14%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFD 58
           K  LV G    +G+   + L   +G    VA    +         AL     P   +F  
Sbjct: 4   KVALVTGAAQGIGRAFAEALLL-KG--AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 60

Query: 59  VDLKSGSG----FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV 104
            D+         F  V   FG+ D++VN A        E + +  + IN+
Sbjct: 61  CDVADQQQLRDTFRKVVDHFGRLDILVNNAG----VNNEKNWEKTLQINL 106

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 20/117 (17%), Positives = 38/117 (32%), Gaps = 19/117 (16%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL------PHSFVFF 57
           K V++ G +  +G+      ++ EG    V  T  +    +     +             
Sbjct: 5   KSVIITGSSNGIGRSAAVIFAK-EG--AQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61

Query: 58  DVDLKSGSG----FDAVALKFGQPDVVVNCAALSVPRVCEN------DPDSAMSINV 104
             D+   SG     +    KFG+ D++VN A  ++     N             +N 
Sbjct: 62  VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNF 118

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 20/113 (17%), Positives = 36/113 (31%), Gaps = 15/113 (13%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH-----SFVFFD 58
           K VLV GGT  +G  +++  +   G    +     +       L          +    D
Sbjct: 9   KTVLVTGGTKGIGHAIVEEFAG-FG--AVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 65

Query: 59  VDLKSG--SGFDAVALKF-GQPDVVVNCAALSVP----RVCENDPDSAMSINV 104
             L+         V+  F G+ D+++N                D    +S N+
Sbjct: 66  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNL 118

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 36.2 bits (81), Expect = 0.004
 Identities = 42/318 (13%), Positives = 83/318 (26%), Gaps = 22/318 (6%)

Query: 6   VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS-- 63
           ++V GG G++G ++++ L++ +G    +   +       + L  L  +      D     
Sbjct: 2   IIVTGGAGFIGSNIVKALND-KGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI 60

Query: 64  ----GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
                 G        G            +           +   +   +    +S     
Sbjct: 61  MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY 120

Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
                     + YE   + Y     +    V      A  + +  +  N    R      
Sbjct: 121 GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS 180

Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
             +++    +         L +G       +  R  VYV DV  + L      +S    +
Sbjct: 181 MASVAFHLNTQLNNGESPKLFEG-----SENFKRDFVYVGDVADVNLWFLENGVSGIFNL 235

Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
                       S   +A+              P          +  A    D+T L   
Sbjct: 236 G------TGRAESFQAVADATLAYHKKGQIEYIPFPD---KLKGRYQAFTQADLTNLRAA 286

Query: 300 LNIDP-VTYKDGVKLTLA 316
               P  T  +GV   +A
Sbjct: 287 GYDKPFKTVAEGVTEYMA 304

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 35.8 bits (82), Expect = 0.004
 Identities = 20/120 (16%), Positives = 36/120 (30%), Gaps = 15/120 (12%)

Query: 4   KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFDVDL 61
           K  ++ GG G +G+   +      G    V     +    Q + + +  P    F   D+
Sbjct: 7   KVAIITGGAGGIGETTAKLFVR-YG--AKVVIADIADDHGQKVCNNIGSPDVISFVHCDV 63

Query: 62  KSGSG----FDAVALKFGQPDVVVNCAALSVPR------VCENDPDSAMSINVPSSLVNW 111
                     D    K G+ D++     +              D    M INV  + +  
Sbjct: 64  TKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVA 123

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	320
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	100.0
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.97
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.97
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.97
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.97
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.96
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.95
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.93
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.86
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.86
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.85
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.85
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.85
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.85
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.84
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.84
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.84
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.83
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.83
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.83
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.83
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.83
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.82
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.82
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.82
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.82
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.82
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.82
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.82
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.82
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.82
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.82
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.81
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.81
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.81
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.8
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.8
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.8
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.79
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.78
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.78
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.78
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.78
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.77
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.77
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.77
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.77
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.77
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.77
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.76
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.75
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.75
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.74
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.74
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.73
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.73
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.73
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.71
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.71
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.68
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.67
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.66
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.63
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.63
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.62
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.62
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.6
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.56
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.55
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.51
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.48
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.48
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.44
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.35
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.32
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.39
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.36
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.3
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.19
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.18
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.16
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.08
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.01
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.98
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.93
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.92
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.87
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.86
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.85
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.81
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.8
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.8
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.79
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.79
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.79
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.79
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.78
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.76
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.74
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.7
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.69
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.67
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.67
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.65
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.63
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.61
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.61
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.6
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.58
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.55
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.53
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.52
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.5
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.48
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.44
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.44
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.44
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.41
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.35
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.34
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.33
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.32
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.3
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.23
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.2
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.18
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.18
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.18
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.16
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.14
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.13
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.12
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.11
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.1
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.1
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.03
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.03
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.02
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.02
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.01
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.01
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.0
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.98
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.97
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.96
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.81
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.81
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.79
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.78
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	96.69
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.63
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.63
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.59
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.57
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.57
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.38
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.37
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	96.32
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.27
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.25
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.23
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.23
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.19
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.14
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.07
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.06
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.05
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.85
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.8
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.8
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.77
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.63
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.58
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.56
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.51
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.51
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.45
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.33
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.2
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	95.15
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.14
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.13
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	95.09
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.03
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.97
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	94.9
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.88
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.81
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.8
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.74
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	94.6
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	94.53
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.48
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.42
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.35
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.33
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	94.32
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.12
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.1
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	94.09
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	94.01
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	93.99
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	93.99
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	93.95
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.93
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.83
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	93.69
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.69
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.66
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.58
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.56
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	93.55
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.52
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	93.48
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.18
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.14
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.12
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	93.0
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.0
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.88
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.73
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.59
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.55
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.48
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	92.37
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.35
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.15
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	92.06
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.04
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	91.99
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	91.96
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	91.79
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.73
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.54
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	91.41
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	91.39
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	91.03
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.97
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.96
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	90.94
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.62
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.6
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	90.42
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.32
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	89.87
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	89.73
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	89.34
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	89.25
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	88.97
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.96
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	88.93
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	88.85
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	88.78
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	88.77
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	88.76
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	88.74
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.41
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	88.33
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	88.21
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	87.88
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	87.67
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	87.63
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	87.57
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	87.41
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.14
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.04
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	86.15
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	85.37
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	85.34
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.02
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	84.98
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	84.9
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	84.88
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	84.36
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	84.14
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	84.07
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	83.44
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	82.77
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	82.28
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	81.99
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	81.94
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	81.54
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	81.52
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	81.39
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	80.77
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	80.76
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	80.17

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.2e-51  Score=360.89  Aligned_cols=304  Identities=18%  Similarity=0.105  Sum_probs=234.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-----hhhhh---hhCCCcceEEEeeCCCcccHHHHHHHh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-----PQLLL---DALPHSFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-----~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      .|+|||||||||||++|+++|+++|   ++|++++|..+.     ...+.   .....+++++++|++|.+++.++++..
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKG---YEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCc---CEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc
Confidence            3789999999999999999999999   899999996432     11111   112357889999999999999999876


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc---eEEEeechhhhcccC-CCCcccCCCCCcch
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN---LLIHLSTDQVYEGVK-SFYKEEDEIAPVNV  150 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~---~~v~~Ss~~vy~~~~-~~~~E~~~~~p~~~  150 (320)
                       ++|+|||+|+..+...+..+|...+++|+.++. +++++|++.+++   +|||+||++|||... .+++|+++.+|.++
T Consensus        78 -~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~-nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~  155 (357)
T d1db3a_          78 -QPDEVYNLGAMSHVAVSFESPEYTADVDAMGTL-RLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSP  155 (357)
T ss_dssp             -CCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHH-HHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSH
T ss_pred             -CCCEEEEeecccccchhhhCHHHHHHHHHHHHH-HHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCCh
Confidence             899999999998877778899999999999996 999999987653   799999999998654 48999999999999


Q ss_pred             HHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHH
Q 020880          151 YGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKI  224 (320)
Q Consensus       151 Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~  224 (320)
                      |+.+|..+|++++.+    +.+++++||++||||+.........+..++......+......|+  ..++|+|++|+|++
T Consensus       156 Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a  235 (357)
T d1db3a_         156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKM  235 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHH
Confidence            999999999988764    678999999999999764332222334445555544444555554  68999999999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCcc----------cc---------------
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSAS----------SV---------------  279 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~----------~~---------------  279 (320)
                      +++++++.      .+++||+++|+.+|++|+++.+.+.+|...+........          ..               
T Consensus       236 ~~~~~~~~------~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (357)
T d1db3a_         236 QWMMLQQE------QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPR  309 (357)
T ss_dssp             HHHTTSSS------SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGG
T ss_pred             HHHHHhCC------CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccc
Confidence            99998763      234899999999999999999999998543321100000          00               


Q ss_pred             CCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHHHhh
Q 020880          280 DRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLAA  317 (320)
Q Consensus       280 ~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~  317 (320)
                      ..++.......+|++|++++|||+| ++++|+|++++++
T Consensus       310 ~~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~  348 (357)
T d1db3a_         310 YFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAN  348 (357)
T ss_dssp             GCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred             cCCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHH
Confidence            0011123445679999999999999 8999999999764

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=7.4e-51  Score=351.28  Aligned_cols=298  Identities=21%  Similarity=0.258  Sum_probs=241.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCC---ceEEEecCCCC--Chhhhhh-hCCCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKP---YDVAATHHSTP--LPQLLLD-ALPHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v---~~v~~~~r~~~--~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      |||||||||||||++|+++|+++|++|   .+|+...+...  ....+.. ....+++++.+|+.+.........   .+
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~   77 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR---GV   77 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT---TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcccc---cc
Confidence            579999999999999999999999765   23444443221  1111111 123578899999999887665444   89


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHH
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKV  156 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~  156 (320)
                      |.|+|+|+.........++...+++|+.++. +++++|.+.++++|||+||+++||.... +++|+++..|.++|+.+|.
T Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~-~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~  156 (322)
T d1r6da_          78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQ-TLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKA  156 (322)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHH-HHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHH
T ss_pred             ceEEeecccccccccccchHHHhhhhHHHHH-HHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHH
Confidence            9999999987777677788899999999996 9999999999999999999999997655 8999999999999999999


Q ss_pred             HHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHh
Q 020880          157 AAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTN  230 (320)
Q Consensus       157 ~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~  230 (320)
                      .+|.+++.+    +.+++++||++||||++.   ...++..++.++. .++++.++++  +.|+|+|++|+|+++..+++
T Consensus       157 ~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~---~~~~i~~~i~~~~-~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~  232 (322)
T d1r6da_         157 GSDLVARAYHRTYGLDVRITRCCNNYGPYQH---PEKLIPLFVTNLL-DGGTLPLYGDGANVREWVHTDDHCRGIALVLA  232 (322)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEEECTTCC---TTSHHHHHHHHHH-TTCCEEEETTSCCEEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeeeEECcCCC---cCcHHHHHHHHHH-cCCCcEEecCCCeEEccEEHHHHHHHHHHHHh
Confidence            999988764    568999999999999864   2345556666555 6778888765  68999999999999999999


Q ss_pred             hhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHH
Q 020880          231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKD  309 (320)
Q Consensus       231 ~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~  309 (320)
                      ++..     +++||+++++.+|+.|+++.+.+.+|.+.+.+....     ..........+|++|+++.|||+| ++++|
T Consensus       233 ~~~~-----~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~~k~~~~lg~~p~~~~ee  302 (322)
T d1r6da_         233 GGRA-----GEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVA-----DRKGHDLRYSLDGGKIERELGYRPQVSFAD  302 (322)
T ss_dssp             HCCT-----TCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEEC-----CCTTCCCBCCBCCHHHHHHHCCCCCSCHHH
T ss_pred             CCCC-----CCeeEEeecccchhHHHHHHHHHHhCCCccceeecC-----CCCCCCceeeeCHHHHHHHHCCCCCCCHHH
Confidence            8544     349999999999999999999999998765432221     222344567899999999999999 89999


Q ss_pred             HHHHHHhhhc
Q 020880          310 GVKLTLAAEA  319 (320)
Q Consensus       310 ~l~~~i~~~~  319 (320)
                      +|+++++|++
T Consensus       303 gI~~~i~w~~  312 (322)
T d1r6da_         303 GLARTVRWYR  312 (322)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999986

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.5e-50  Score=346.82  Aligned_cols=303  Identities=19%  Similarity=0.191  Sum_probs=240.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh---hh-hhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP---QL-LLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~---~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |||||||||||||++|++.|+++|   ++|++++|.....   .. .......+++++++|++|.+.+.++++.. ++|+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g---~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-~~d~   76 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-AIDT   76 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-TCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-CCCE
Confidence            579999999999999999999999   8898887633221   11 11112357899999999999999998865 8999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCccc-CCCCCcchHHHHHHH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEE-DEIAPVNVYGKSKVA  157 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~-~~~~p~~~Y~~sK~~  157 (320)
                      |||+||..+.+.+..+|...+++|+.++. +++++|++.+++++|++||.++|+.... +..|. ....|.++|+.+|..
T Consensus        77 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~-nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~  155 (338)
T d1udca_          77 VIHFAGLKAVGESVQKPLEYYDNNVNGTL-RLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLM  155 (338)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHHHHHH-HHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHH
T ss_pred             EEECCCccchhhHHhCHHHHHHhHHHHHH-HHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhh
Confidence            99999987777777789999999999996 9999999999999999999999986654 44444 456799999999999


Q ss_pred             HHHHHHHH-----cCCeeEEeecccccCCCCCC-------CCCCChHHHHHHHHhcCCceEeecC--------cccCcee
Q 020880          158 AEKFIYEK-----CSNFAILRSSIIYGPQTISP-------VPKSLPIQWIDSVLSKGEKVEFFHD--------ECRCPVY  217 (320)
Q Consensus       158 ~e~~~~~~-----~~~~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~  217 (320)
                      +|.++.++     +.+++++||+++|||+....       ....++..++..+...+.++.+.|+        +.|+|+|
T Consensus       156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~  235 (338)
T d1udca_         156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH  235 (338)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEE
T ss_pred             hhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEE
Confidence            99988753     35678999999999975321       1223444455555555667777653        4789999


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHH
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV  297 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  297 (320)
                      ++|++.++..+........  .+++||+++++.+|+.|+++.+.+.+|.+.++.. .     +..........+|++|++
T Consensus       236 v~D~~~~~~~~~~~~~~~~--~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~-~-----~~~~~~~~~~~~d~~k~~  307 (338)
T d1udca_         236 VMDLADGHVVAMEKLANKP--GVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHF-A-----PRREGDLPAYWADASKAD  307 (338)
T ss_dssp             HHHHHHHHHHHHHHHTTCC--EEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEE-E-----CCCTTCCSBCCBCCHHHH
T ss_pred             Eeehhhhcccccccccccc--CcceeeecCCCCCcHHHHHHHHHHHHCCCCceEE-C-----CCCCCCCCEeeECHHHHH
Confidence            9999999988887654332  3569999999999999999999999997765431 1     122223455678999999


Q ss_pred             hhcCCCc-cCHHHHHHHHHhhhc
Q 020880          298 QTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       298 ~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      ++|||+| ++++|+|+++++|++
T Consensus       308 ~~lgwkp~~~l~egi~~ti~w~~  330 (338)
T d1udca_         308 RELNWRVTRTLDEMAQDTWHWQS  330 (338)
T ss_dssp             HHHCCCCCCCHHHHHHHHHHHHH
T ss_pred             HHHCCCcCCCHHHHHHHHHHHHH
Confidence            9999999 999999999999986

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=5.8e-50  Score=350.46  Aligned_cols=302  Identities=19%  Similarity=0.283  Sum_probs=236.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceE-EEecCCCCC-hhhhhhhC--CCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDV-AATHHSTPL-PQLLLDAL--PHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v-~~~~r~~~~-~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |||||||||||||++|+++|+++|   ++| .++.+.... .......+  ..+++++.+|++|++.+..+++.. ++|+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g---~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-~~d~   76 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNT---QDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-QPDA   76 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHC---SCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-CCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCC---CCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-CCCE
Confidence            589999999999999999999999   554 444432211 11111111  357899999999999999988876 8999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc---------CceEEEeechhhhcccCC-----------CC
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK---------ENLLIHLSTDQVYEGVKS-----------FY  139 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~---------~~~~v~~Ss~~vy~~~~~-----------~~  139 (320)
                      ||||||..++..+..+|...+++|+.++. +++++|++.+         +++|||+||.++||....           ..
T Consensus        77 VihlAa~~~~~~~~~~p~~~~~~N~~gt~-nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~  155 (361)
T d1kewa_          77 VMHLAAESHVDRSITGPAAFIETNIVGTY-ALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLF  155 (361)
T ss_dssp             EEECCSCCCHHHHHHCTHHHHHHHTHHHH-HHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCB
T ss_pred             EEECccccchhhHHhCHHHHHHHHHHHHH-HHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCc
Confidence            99999998777777889999999999996 9999998754         458999999999985432           13


Q ss_pred             cccCCCCCcchHHHHHHHHHHHHHH----HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--ccc
Q 020880          140 KEEDEIAPVNVYGKSKVAAEKFIYE----KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECR  213 (320)
Q Consensus       140 ~E~~~~~p~~~Y~~sK~~~e~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  213 (320)
                      .|.++.+|.++|+.+|.++|.+++.    ++.+++++||++||||++.   ...++..++.++. .++++.++|+  +.|
T Consensus       156 ~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~---~~~~i~~~i~~~~-~g~~~~v~g~g~~~r  231 (361)
T d1kewa_         156 TETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHF---PEKLIPLVILNAL-EGKPLPIYGKGDQIR  231 (361)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCC---TTSHHHHHHHHHH-HTCCEEEETTSCCEE
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCC---cCcHHHHHHHHHH-cCCCcEEeCCCCeEE
Confidence            4667788999999999999998876    4678999999999999864   2345566666665 5778887764  689


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCcccc--CCccccCCCCCCCCcccc
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP--VSASSVDRGVQSPADISM  291 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  291 (320)
                      +|+|++|+|++++.++++...     +++||+++++.+|+.|+++.+.+.++...+....  .........+.....+.+
T Consensus       232 ~~i~v~D~a~ai~~~~~~~~~-----~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (361)
T d1kewa_         232 DWLYVEDHARALHMVVTEGKA-----GETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAI  306 (361)
T ss_dssp             EEEEHHHHHHHHHHHHHHCCT-----TCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCB
T ss_pred             eCEEHHHHHHHHHHHHhcCCC-----CCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeee
Confidence            999999999999999998543     3499999999999999999999887654322111  111111222334566789


Q ss_pred             ChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          292 DITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       292 d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      |++|++++|||+| ++++|+|+++++|++
T Consensus       307 d~~k~~~~lgw~P~~~l~e~i~~ti~w~~  335 (361)
T d1kewa_         307 DAGKISRELGWKPLETFESGIRKTVEWYL  335 (361)
T ss_dssp             CCHHHHHHHCCCCSCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Confidence            9999999999999 999999999999974

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-50  Score=345.72  Aligned_cols=292  Identities=21%  Similarity=0.307  Sum_probs=228.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|||||||||||||++|+++|+++|   ++|++++|............   .....+|+.+.+.+..++.   ++|+|||
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g---~~V~~~d~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~---~~d~Vih   71 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDG---HEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEPLYI---EVDQIYH   71 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSCCCC---CCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCCcCCHHHHHHh---cCCCceEEEehHHHHHHHc---CCCEEEE
Confidence            5899999999999999999999999   88998877433322222211   1112334444433333333   8999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCccc-----CCCCCcchHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEE-----DEIAPVNVYGKSKV  156 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~-----~~~~p~~~Y~~sK~  156 (320)
                      ||+..+.+.+..++...+++|+.++. +++++|++.++ |+||+||.+|||.... +++|+     ++..|.++|+.+|.
T Consensus        72 lAa~~~~~~~~~~~~~~~~~Nv~g~~-~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~  149 (312)
T d2b69a1          72 LASPASPPNYMYNPIKTLKTNTIGTL-NMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKR  149 (312)
T ss_dssp             CCSCCSHHHHTTCHHHHHHHHHHHHH-HHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHH
T ss_pred             CcccCCchhHHhCHHHHHHHHHHHHH-HHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHH
Confidence            99988776667789999999999995 99999999987 8999999999996533 55544     56789999999999


Q ss_pred             HHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHh
Q 020880          157 AAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTN  230 (320)
Q Consensus       157 ~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~  230 (320)
                      ++|.+++.+    +.+++++||++||||++... ...++..++.++. .++++.++++  +.++|+|++|+|++++.+++
T Consensus       150 ~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~~~i~~~i~~~~-~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~  227 (312)
T d2b69a1         150 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN-DGRVVSNFILQAL-QGEPLTVYGSGSQTRAFQYVSDLVNGLVALMN  227 (312)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTT-CCCHHHHHHHHHH-HTCCEEEESSSCCEEECEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCC-CccHHHHHHHHHH-cCCCeEEeCCCCeeEccEEHHHHHHHHHHHHh
Confidence            999988654    67899999999999987543 2345556666655 5788888765  58999999999999999987


Q ss_pred             hhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHH
Q 020880          231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKD  309 (320)
Q Consensus       231 ~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~  309 (320)
                      ...      .++||+++++..++.++++.+.+.++.+.++...      +..........+|++|++++|||+| +++++
T Consensus       228 ~~~------~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~  295 (312)
T d2b69a1         228 SNV------SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFL------SEAQDDPQKRKPDIKKAKLMLGWEPVVPLEE  295 (312)
T ss_dssp             SSC------CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEE------CCCTTCCCCCCBCCHHHHHHHCCCCCSCHHH
T ss_pred             hcc------CCceEecCCcccchhhHHHHHHHHhCCCCceEEC------CCCCCCCCeeeECHHHHHHHHCCCCCCCHHH
Confidence            632      3489999999999999999999999987654321      1222345567889999999999999 89999


Q ss_pred             HHHHHHhhhc
Q 020880          310 GVKLTLAAEA  319 (320)
Q Consensus       310 ~l~~~i~~~~  319 (320)
                      +|+++++|++
T Consensus       296 ~I~~~i~w~~  305 (312)
T d2b69a1         296 GLNKAIHYFR  305 (312)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999985

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.6e-49  Score=344.28  Aligned_cols=306  Identities=19%  Similarity=0.177  Sum_probs=244.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhh----hhhhC----CCcceEEEeeCCCcccHHHHHHH
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL----LLDAL----PHSFVFFDVDLKSGSGFDAVALK   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~----~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~   73 (320)
                      ++|+|||||||||||++|+++|+++|   ++|++++|.......    .....    ...++++.+|+.|...+..... 
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g---~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-   90 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLD---QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-   90 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCc---CEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc-
Confidence            46799999999999999999999999   889998874432111    11111    2467889999999887665554 


Q ss_pred             hCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHH
Q 020880           74 FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYG  152 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~  152 (320)
                        .++.|+|+++......+..++...+++|+.++. +++++|.+.++++|||+||.++||.... +++|+++.+|.+.|+
T Consensus        91 --~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~-~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~  167 (341)
T d1sb8a_          91 --GVDYVLHQAALGSVPRSINDPITSNATNIDGFL-NMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYA  167 (341)
T ss_dssp             --TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHH-HHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHH
T ss_pred             --cccccccccccccccccccCccchhheeehhHH-HHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcch
Confidence              899999999987766677889999999999996 9999999999999999999999997655 899999999999999


Q ss_pred             HHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCC-CChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHH
Q 020880          153 KSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPK-SLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKII  225 (320)
Q Consensus       153 ~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~  225 (320)
                      .+|..+|++++.+    +.+++++||++|||++....... .++..++..++ .|+++.++|+  +.|+|+|++|+|+++
T Consensus       168 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~-~g~~i~~~g~g~~~r~~i~v~D~~~a~  246 (341)
T d1sb8a_         168 VTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMI-QGDDVYINGDGETSRDFCYIENTVQAN  246 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHH-HTCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHH-cCCceEEcCCCCEEEEEEEEeccchhh
Confidence            9999999988765    46899999999999987544333 34444555544 5778888765  689999999999999


Q ss_pred             HHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-
Q 020880          226 LALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-  304 (320)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-  304 (320)
                      ..++.....   ..+.+||+++++..|+.|+++.|.+.++.+.......+ ..............+|++|+++.|||+| 
T Consensus       247 ~~~~~~~~~---~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~k~~~~LGw~p~  322 (341)
T d1sb8a_         247 LLAATAGLD---ARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREP-VYRDFREGDVRHSLADISKAAKLLGYAPK  322 (341)
T ss_dssp             HHHHTCCGG---GCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCC-EEECCCTTCCSBCCBCCHHHHHHTCCCCC
T ss_pred             hhhhhcccc---ccceeeeecccccchHHHHHHHHHHHhccccccccccc-cccCCCCCCcCeeeeCHHHHHHHHCCCcC
Confidence            999877532   23559999999999999999999999986643221111 1112223344566789999999999999 


Q ss_pred             cCHHHHHHHHHhhhc
Q 020880          305 VTYKDGVKLTLAAEA  319 (320)
Q Consensus       305 ~~~~~~l~~~i~~~~  319 (320)
                      ++++++|+++++|+.
T Consensus       323 ~sl~~gi~~ti~wy~  337 (341)
T d1sb8a_         323 YDVSAGVALAMPWYI  337 (341)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHH
Confidence            999999999999975

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=2.4e-47  Score=332.43  Aligned_cols=297  Identities=20%  Similarity=0.241  Sum_probs=235.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC--ChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP--LPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      ||||||||||||||++|+++|+++|++ +.|+++++...  ...........+++++.+|++|.+.+..++.   +++.|
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~-v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~---~~~~v   77 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPD-VHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA---KADAI   77 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT---TCSEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCC-eEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh---hhhhh
Confidence            789999999999999999999999955 34554443211  1111122234688999999999999888876   89999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhccc-------------CCCCcccCCCCC
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV-------------KSFYKEEDEIAP  147 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~-------------~~~~~E~~~~~p  147 (320)
                      +|+|+......+..+|...+++|+.++. ++++++.+.+. ++|++||+.+||..             ...++|+++..|
T Consensus        78 ~~~a~~~~~~~~~~~~~~~~~~N~~g~~-nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p  155 (346)
T d1oc2a_          78 VHYAAESHNDNSLNDPSPFIHTNFIGTY-TLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNP  155 (346)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHH-HHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCC
T ss_pred             hhhhhcccccchhhCcccceeeehHhHH-hhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCCCCC
Confidence            9999988777777789999999999996 99999999986 89999999999842             124677888899


Q ss_pred             cchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHH
Q 020880          148 VNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDV  221 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~  221 (320)
                      .+.|+.+|.++|.+++.+    +.+++++||++||||+..   ....+..++.... .+.++.++++  +.|+|+|++|+
T Consensus       156 ~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~---~~~~~~~~i~~~~-~~~~~~i~~~g~~~r~~i~v~D~  231 (346)
T d1oc2a_         156 SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQH---IEKFIPRQITNIL-AGIKPKLYGEGKNVRDWIHTNDH  231 (346)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCC---TTSHHHHHHHHHH-HTCCCEEETTSCCEEECEEHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCC---ccchhHHHHHHHH-cCCceeEeCCCCccccccchhhH
Confidence            999999999999988654    578999999999999763   2334444555444 5666777654  68999999999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcC
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN  301 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg  301 (320)
                      |++++.++.++..+     +.||+++++..++.++++.+.+.++.+...+...+     ........+.+|++|++++||
T Consensus       232 a~a~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~~k~~~~LG  301 (346)
T d1oc2a_         232 STGVWAILTKGRMG-----ETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVT-----DRAGHDLRYAIDASKLRDELG  301 (346)
T ss_dssp             HHHHHHHHHHCCTT-----CEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEEC-----CCTTCCCBCCBCCHHHHHHHC
T ss_pred             HHHHHHHHhhcccC-----ccccccccccccchHHHHHHHHHhCCCCcceEECC-----CCCCCCceeeeCHHHHHHHHC
Confidence            99999998885443     48999999999999999999999998654432222     122234456789999999999


Q ss_pred             CCc-c-CHHHHHHHHHhhhc
Q 020880          302 IDP-V-TYKDGVKLTLAAEA  319 (320)
Q Consensus       302 ~~~-~-~~~~~l~~~i~~~~  319 (320)
                      |+| . +++++|+++++|++
T Consensus       302 w~P~~t~l~e~i~~ti~w~~  321 (346)
T d1oc2a_         302 WTPQFTDFSEGLEETIQWYT  321 (346)
T ss_dssp             CCCSCCCHHHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHHHHH
Confidence            999 5 69999999999876

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2e-47  Score=333.01  Aligned_cols=305  Identities=21%  Similarity=0.259  Sum_probs=238.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh-h---hhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP-Q---LLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~-~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |.|||||||||||++|+++|+++|   ++|+++++..... .   ........+++++.+|++|.+.+..++... ++|+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g---~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-~~d~   77 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENG---YDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-KIDS   77 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-CCCE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCc---CeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-CCCE
Confidence            569999999999999999999999   7888876543221 1   111122467889999999999999988875 8999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-----CCCcccCCCCCcchHHHH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-----SFYKEEDEIAPVNVYGKS  154 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-----~~~~E~~~~~p~~~Y~~s  154 (320)
                      |||||+...+.....++.....+|+.++. +++++|++.+++++|++||.++||...     .+++|+.+..|.++|+.+
T Consensus        78 VihlAa~~~~~~~~~~~~~~~~~N~~~t~-~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~s  156 (347)
T d1z45a2          78 VIHFAGLKAVGESTQIPLRYYHNNILGTV-VLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHT  156 (347)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHHHHHH-HHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHH
T ss_pred             EEEccccccccccccCcccccccchhhhH-HHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhH
Confidence            99999988776677788999999999996 999999999999999999999999653     258888999999999999


Q ss_pred             HHHHHHHHHHH------cCCeeEEeecccccCCCCCC-------CCCCChHHHHHHHHhcCCceEeecC--------ccc
Q 020880          155 KVAAEKFIYEK------CSNFAILRSSIIYGPQTISP-------VPKSLPIQWIDSVLSKGEKVEFFHD--------ECR  213 (320)
Q Consensus       155 K~~~e~~~~~~------~~~~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~  213 (320)
                      |.++|++++.+      +.+++++||+++||+.....       ....++..++..+...+.++.++|+        ..+
T Consensus       157 K~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~  236 (347)
T d1z45a2         157 KYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIR  236 (347)
T ss_dssp             HHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEE
T ss_pred             HHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceee
Confidence            99999988765      34689999999999865321       1122333344444445666776654        357


Q ss_pred             CceeHHHHHHHHHHHHhhhhccc--cccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCcccc
Q 020880          214 CPVYVRDVVKIILALTNRWLSED--KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM  291 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~--~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (320)
                      |++++.|++++++.+++.....+  ...+++||+++++++|+.|+++.+.+.+|.+.+....      ...........+
T Consensus       237 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~  310 (347)
T d1z45a2         237 DYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVT------GRRAGDVLNLTA  310 (347)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------------CCCCCB
T ss_pred             eeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeC------CCCCCCCCEeeE
Confidence            88999999999999887755433  2245799999999999999999999999987654211      112233455678


Q ss_pred             ChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          292 DITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       292 d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      |++|++++|||+| ++++|+|+++++|++
T Consensus       311 d~sk~~~~lGw~p~~~lee~i~~ti~w~~  339 (347)
T d1z45a2         311 KPDRAKRELKWQTELQVEDSCKDLWKWTT  339 (347)
T ss_dssp             CCHHHHHHTCCCCCCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Confidence            9999999999999 899999999999986

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=3.8e-47  Score=327.85  Aligned_cols=302  Identities=15%  Similarity=0.078  Sum_probs=239.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh-hhhhhC--CCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-LLLDAL--PHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~-~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |+|||||||||||++|+++|+++|   ++|++++|..+... ..++.+  .++++++.+|++|.+.+.+.+... .++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g---~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~~~   76 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKG---YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-QPQEV   76 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-CCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-ccccc
Confidence            689999999999999999999999   89999998754421 112212  356889999999999998888775 88999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAA  158 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~  158 (320)
                      +|+|+.........++...++.|+.++. +++++|++.+++ +|++.||..+||.... +.+|+++..|.++|+.+|.++
T Consensus        77 ~~~a~~~~~~~~~~~~~~~~~~n~~g~~-~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~  155 (321)
T d1rpna_          77 YNLAAQSFVGASWNQPVTTGVVDGLGVT-HLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYG  155 (321)
T ss_dssp             EECCSCCCHHHHTTSHHHHHHHHTHHHH-HHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHH
T ss_pred             ccccccccccccccchHHHHhhhhhchH-HHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHH
Confidence            9999887777777788999999999996 999999998854 7888899999986655 788999999999999999999


Q ss_pred             HHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec--CcccCceeHHHHHHHHHHHHhhh
Q 020880          159 EKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRDVVKIILALTNRW  232 (320)
Q Consensus       159 e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~a~~~~~~~~~~  232 (320)
                      |++++.+    +.+++++||+++|||..........+..++.+....+.+....|  ++.|+|+|++|+|+++.++++++
T Consensus       156 E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~  235 (321)
T d1rpna_         156 HWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD  235 (321)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcC
Confidence            9988764    57899999999999975322212223344444444444544454  46899999999999999999875


Q ss_pred             hccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHH
Q 020880          233 LSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGV  311 (320)
Q Consensus       233 ~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l  311 (320)
                      .      .+.||+++++..|+.++++.+.+.++.+.+.........  .++.....+..|++|++++|||+| ++++|+|
T Consensus       236 ~------~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~i  307 (321)
T d1rpna_         236 K------ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAF--FRPAEVDVLLGNPAKAQRVLGWKPRTSLDELI  307 (321)
T ss_dssp             S------CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGG--CCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHH
T ss_pred             C------cCCceecccccceehhhhHHHHHHhCCCccceeecCCCC--CCCCccCCccCCHHHHHHHHCCCcCCCHHHHH
Confidence            3      247999999999999999999999987654322222111  122344567789999999999999 8999999


Q ss_pred             HHHHhhh
Q 020880          312 KLTLAAE  318 (320)
Q Consensus       312 ~~~i~~~  318 (320)
                      +++++|+
T Consensus       308 ~~tv~~~  314 (321)
T d1rpna_         308 RMMVEAD  314 (321)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999984

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-47  Score=329.18  Aligned_cols=305  Identities=19%  Similarity=0.193  Sum_probs=240.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC------CCCh----hhhhhhCCCcceEEEeeCCCcccHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS------TPLP----QLLLDALPHSFVFFDVDLKSGSGFDAV   70 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~------~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~   70 (320)
                      |+ |||||||||||||++|+++|+++|   ++|++++|.      ....    .........++.++.+|++|.+.+.++
T Consensus         1 M~-kKILITG~tGfIGs~lv~~Ll~~g---~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~   76 (346)
T d1ek6a_           1 MA-EKVLVTGGAGYIGSHTVLELLEAG---YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRL   76 (346)
T ss_dssp             CC-SEEEEETTTSHHHHHHHHHHHHTT---CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHH
T ss_pred             CC-CeEEEECCCcHHHHHHHHHHHHCc---CEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccc
Confidence            55 789999999999999999999999   778877542      1111    111111246789999999999999988


Q ss_pred             HHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCC--CcccCCCCCc
Q 020880           71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSF--YKEEDEIAPV  148 (320)
Q Consensus        71 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~--~~E~~~~~p~  148 (320)
                      +... ++++|+|+||..++..+..+|...++.|+.++. ++++++++.++++|||+||+.+|+.....  ..+.....|.
T Consensus        77 ~~~~-~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~-~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~  154 (346)
T d1ek6a_          77 FKKY-SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTI-QLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCT  154 (346)
T ss_dssp             HHHC-CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHH-HHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             cccc-ccccccccccccCcHhhHhCHHHHHHhhhcccc-cccchhhhcCcccccccccceeeeccccccccccccccccC
Confidence            8764 788999999998877777889999999999996 99999999999999999999999976653  3333446678


Q ss_pred             chHHHHHHHHHHHHHHH-----cCCeeEEeecccccCCCCCC-------CCCCChHHHHHHHHhcCCceEeecC------
Q 020880          149 NVYGKSKVAAEKFIYEK-----CSNFAILRSSIIYGPQTISP-------VPKSLPIQWIDSVLSKGEKVEFFHD------  210 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~-----~~~~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------  210 (320)
                      ++|+.+|..+|+.++++     +.+++++||+.+||+.....       ....+...++..+..++.++.++|+      
T Consensus       155 ~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~  234 (346)
T d1ek6a_         155 NPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTED  234 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSS
T ss_pred             ChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCC
Confidence            89999999999988764     45789999999999975421       1222333445555666777776542      


Q ss_pred             --cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCc
Q 020880          211 --ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPAD  288 (320)
Q Consensus       211 --~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (320)
                        +.|+|+|++|+|+++..++.......  .+++||+++++.+|+.|+++.+.+.+|.+.++. ..     +..+.....
T Consensus       235 g~~~Rdfi~v~D~a~~~~~~~~~~~~~~--~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~-~~-----~~~~~e~~~  306 (346)
T d1ek6a_         235 GTGVRDYIHVVDLAKGHIAALRKLKEQC--GCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYK-VV-----ARREGDVAA  306 (346)
T ss_dssp             SSCEECEEEHHHHHHHHHHHHHHHTTTC--CEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEE-EE-----CCCTTCCSE
T ss_pred             CCeeEeEEEEEeccchhhhhcccccccc--CceEEEeCCCCcccHHHHHHHHHHHhCCCCCeE-EC-----CCCCCCCCE
Confidence              46899999999999998877654332  356999999999999999999999999876543 21     122334456


Q ss_pred             cccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          289 ISMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       289 ~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      ..+|++|++++|||+| ++++|+|+++++|++
T Consensus       307 ~~~d~~k~~~~lgw~p~~slee~I~~~i~w~~  338 (346)
T d1ek6a_         307 CYANPSLAQEELGWTAALGLDRMCEDLWRWQK  338 (346)
T ss_dssp             ECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred             eeECHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence            7789999999999999 899999999999986

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=8.3e-47  Score=331.16  Aligned_cols=294  Identities=19%  Similarity=0.192  Sum_probs=230.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|||||||||||||++|+++|+++|   ++|++++|.+.......   ....++..+|+.+.+.+.++++   ++|+|||
T Consensus        15 nMKILVTGgsGfIGs~lv~~L~~~g---~~V~~~d~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~---~~d~Vih   85 (363)
T d2c5aa1          15 NLKISITGAGGFIASHIARRLKHEG---HYVIASDWKKNEHMTED---MFCDEFHLVDLRVMENCLKVTE---GVDHVFN   85 (363)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCSSSCGG---GTCSEEEECCTTSHHHHHHHHT---TCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEeCCCccchhhh---cccCcEEEeechhHHHHHHHhh---cCCeEee
Confidence            5889999999999999999999999   78888877544321111   1345678889998887766665   8999999


Q ss_pred             CCCccCccc-cccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC--------CCcccCCCCCcchHHH
Q 020880           83 CAALSVPRV-CENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS--------FYKEEDEIAPVNVYGK  153 (320)
Q Consensus        83 ~a~~~~~~~-~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~--------~~~E~~~~~p~~~Y~~  153 (320)
                      +|+...... ...++......|+.++. +++++|++.++++||++||.++|+....        ..+|.++..|.++|+.
T Consensus        86 ~a~~~~~~~~~~~~~~~~~~~n~~gt~-~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~  164 (363)
T d2c5aa1          86 LAADMGGMGFIQSNHSVIMYNNTMISF-NMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGL  164 (363)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHH-HHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHH
T ss_pred             cccccccccccccccccccccccchhh-HHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHH
Confidence            998765532 24567888899999995 9999999999999999999999995433        2345567889999999


Q ss_pred             HHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCC-ChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHH
Q 020880          154 SKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKS-LPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIIL  226 (320)
Q Consensus       154 sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~  226 (320)
                      +|.++|++++.+    +.+++++||+++||+++....... ..............+...+++  +.|+|+|++|+++++.
T Consensus       165 sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~  244 (363)
T d2c5aa1         165 EKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVL  244 (363)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHH
Confidence            999999988754    668999999999999875433222 222333333445666666654  6899999999999999


Q ss_pred             HHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-c
Q 020880          227 ALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-V  305 (320)
Q Consensus       227 ~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~  305 (320)
                      +++++.      .+++||++++..+|+.|+++.+.+.++.+.++. ..+.      ........+|++|++++|||+| +
T Consensus       245 ~~~~~~------~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~-~~~~------~~~~~~~~~d~ska~~~LGw~p~~  311 (363)
T d2c5aa1         245 RLTKSD------FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIH-HIPG------PEGVRGRNSDNNLIKEKLGWAPNM  311 (363)
T ss_dssp             HHHHSS------CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEE-EECC------CCCCSBCEECCHHHHHHHSCCCCC
T ss_pred             HHHhCC------CCCeEEEecCCcccHHHHHHHHHHHhCCCCceE-eCCC------CCCccccccCHHHHHHHhCCCCCC
Confidence            998763      234899999999999999999999999876543 2221      1234446689999999999999 9


Q ss_pred             CHHHHHHHHHhhhc
Q 020880          306 TYKDGVKLTLAAEA  319 (320)
Q Consensus       306 ~~~~~l~~~i~~~~  319 (320)
                      +++|+|+++++|++
T Consensus       312 sleegi~~ti~w~~  325 (363)
T d2c5aa1         312 RLKEGLRITYFWIK  325 (363)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH
Confidence            99999999999985

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-47  Score=329.36  Aligned_cols=303  Identities=16%  Similarity=0.061  Sum_probs=233.7

Q ss_pred             cEE-EEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh-----hhhhh----hCCCcceEEEeeCCCcccHHHHHHH
Q 020880            4 KRV-LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP-----QLLLD----ALPHSFVFFDVDLKSGSGFDAVALK   73 (320)
Q Consensus         4 ~~i-lItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~-----~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~   73 (320)
                      ||| ||||||||||+||+++|+++|   ++|++++|..+..     ..+..    ....+++++.+|++|++.+..++..
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g---~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   77 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKG---YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE   77 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCc---CEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhh
Confidence            578 999999999999999999999   8999999965421     11111    1135688999999999999999887


Q ss_pred             hCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccC---ceEEEeechhhhcccCC-CCcccCCCCCcc
Q 020880           74 FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE---NLLIHLSTDQVYEGVKS-FYKEEDEIAPVN  149 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~  149 (320)
                      . ++++|+|+|+......+..++...+++|+.++. ++++++++.++   ++|||+||.+|||.... +++|+++.+|.+
T Consensus        78 ~-~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~-~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~  155 (347)
T d1t2aa_          78 V-KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTL-RLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRS  155 (347)
T ss_dssp             H-CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHH-HHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCS
T ss_pred             c-ccceeeeeeeccccchhhccchhhhhhHHHHHH-HHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCC
Confidence            6 899999999987766666778888999999996 99999998765   38999999999996544 899999999999


Q ss_pred             hHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHH
Q 020880          150 VYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVK  223 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~  223 (320)
                      +|+.+|.++|++++.+    +.+++++||+++|||+.............+......+.++...|+  +.|+|+|++|+|+
T Consensus       156 ~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~  235 (347)
T d1t2aa_         156 PYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE  235 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHH
Confidence            9999999999988764    678899999999999754222111122223333335566666654  6899999999999


Q ss_pred             HHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccc---------------cCCCCCCCCc
Q 020880          224 IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASS---------------VDRGVQSPAD  288 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~  288 (320)
                      ++..++++...      +.|+++.+...++.+....+...++.............               ....+.....
T Consensus       236 a~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~  309 (347)
T d1t2aa_         236 AMWLMLQNDEP------EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDF  309 (347)
T ss_dssp             HHHHHHHSSSC------CCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCB
T ss_pred             HHHHHhhcCCC------ccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCE
Confidence            99999988532      36889888999999999999999987643211111000               0011223345


Q ss_pred             cccChHHHHhhcCCCc-cCHHHHHHHHHhh
Q 020880          289 ISMDITKLVQTLNIDP-VTYKDGVKLTLAA  317 (320)
Q Consensus       289 ~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~  317 (320)
                      +.+|++|++++|||+| ++++|+|+++|++
T Consensus       310 ~~~d~skak~~Lgw~P~~sl~e~i~~~I~~  339 (347)
T d1t2aa_         310 LQGDCTKAKQKLNWKPRVAFDELVREMVHA  339 (347)
T ss_dssp             CCBCCHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred             eeECHHHHHHHHCCCcCCCHHHHHHHHHHH
Confidence            6789999999999999 8999999999865

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.5e-46  Score=324.59  Aligned_cols=305  Identities=19%  Similarity=0.285  Sum_probs=234.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |||||||||||||++|+++|+++|+  ++|+++++.......+.+  .++++++++|+++.+.+.+.+..  ++|+|||+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~--~~V~~ld~~~~~~~~~~~--~~~~~~i~~Di~~~~~~~~~~~~--~~d~Vih~   74 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDH--YEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVK--KCDVVLPL   74 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTT--CEEEEEESCCGGGGGGTT--CTTEEEEECCTTTCSHHHHHHHH--HCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCCcchhhhcc--CCCeEEEECccCChHHHHHHHHh--CCCccccc
Confidence            5799999999999999999999996  689998887655444443  35789999999998776654432  79999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcc-------cCCCCCcchHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKE-------EDEIAPVNVYGKSK  155 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E-------~~~~~p~~~Y~~sK  155 (320)
                      |+......+..++...++.|+.++. +++++|.+.++ +++++||..+|+.... ..+|       +....|.+.|+.+|
T Consensus        75 a~~~~~~~~~~~~~~~~~~nv~gt~-~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK  152 (342)
T d2blla1          75 VAIATPIEYTRNPLRVFELDFEENL-RIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK  152 (342)
T ss_dssp             BCCCCHHHHHHSHHHHHHHHTHHHH-HHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHH
T ss_pred             cccccccccccCCcccccccccccc-ccccccccccc-cccccccccccccccccccccccccccccccCCCcchhhhcc
Confidence            9998776677788899999999996 99999999988 7789999999986544 3333       23346778999999


Q ss_pred             HHHHHHHHHH----cCCeeEEeecccccCCCCCCCC-----CCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHH
Q 020880          156 VAAEKFIYEK----CSNFAILRSSIIYGPQTISPVP-----KSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKI  224 (320)
Q Consensus       156 ~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~  224 (320)
                      .++|++++.+    +.+++++||+.+||+.......     ......++.+++ .|+++.++++  ..|+|+|++|+|++
T Consensus       153 ~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~g~~~r~~i~v~D~~~a  231 (342)
T d2blla1         153 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLV-EGSPIKLIDGGKQKRCFTDIRDGIEA  231 (342)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHH-HTCCEEEGGGSCCEEECEEHHHHHHH
T ss_pred             cchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHH-hCCCccccCCCCeeeeecccccccce
Confidence            9999988765    5789999999999997543221     112334455544 5778888764  68999999999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCCC-cCHHHHHHHHHHHhCCCCCccccCCccc---------cCCCCCCCCccccChH
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPDR-VSRVQMAEVVAEIRGYSTSLIKPVSASS---------VDRGVQSPADISMDIT  294 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~~-~s~~e~~~~i~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~d~~  294 (320)
                      +..+++++..  ...+++||+++++. +|+.|+++.+.+.++.........+...         ............+|++
T Consensus       232 ~~~~~~~~~~--~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  309 (342)
T d2blla1         232 LYRIIENAGN--RCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIR  309 (342)
T ss_dssp             HHHHHHCGGG--TTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCH
T ss_pred             eeeehhhccc--cCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccCHH
Confidence            9999988532  22366999987765 8999999999999987764432221111         0111112345568999


Q ss_pred             HHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          295 KLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       295 k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      |++++|||+| ++++|+|+++++|++
T Consensus       310 k~~~~lgw~P~~sleegl~~ti~~y~  335 (342)
T d2blla1         310 NAHRCLDWEPKIDMQETIDETLDFFL  335 (342)
T ss_dssp             HHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence            9999999999 899999999999985

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.1e-46  Score=323.15  Aligned_cols=303  Identities=16%  Similarity=0.080  Sum_probs=234.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-----hhhhhhh----CCCcceEEEeeCCCcccHHHHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-----PQLLLDA----LPHSFVFFDVDLKSGSGFDAVALK   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-----~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~   73 (320)
                      +|++||||||||||+||+++|+++|   ++|++++|..+.     ...+...    ....++++.+|+++.+.+...++.
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~   77 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKG---YEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDV   77 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCc---CEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhh
Confidence            5899999999999999999999999   899999996432     1111110    124577899999999999888876


Q ss_pred             hCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-----CceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           74 FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-----ENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-----~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      . ++|+|||+|+......+..+|...+..|+.++. ++++++++..     ..++++.||+++|+....+++|+++..|.
T Consensus        78 ~-~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~  155 (339)
T d1n7ha_          78 I-KPDEVYNLAAQSHVAVSFEIPDYTADVVATGAL-RLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPR  155 (339)
T ss_dssp             H-CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHH-HHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCC
T ss_pred             h-ccchhhhccccccccccccCccccccccccccc-hhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCc
Confidence            5 899999999987776666788999999999996 8888887533     34788999999999888899999999999


Q ss_pred             chHHHHHHHHHHHHHH----HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHH
Q 020880          149 NVYGKSKVAAEKFIYE----KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVV  222 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a  222 (320)
                      +.|+.+|..+|.++..    ++.+++++||++||||..........+...+......+.+..+.|+  +.|+|+|++|+|
T Consensus       156 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a  235 (339)
T d1n7ha_         156 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYV  235 (339)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHH
Confidence            9999999999997755    4678999999999999754222112222233333334445555554  689999999999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI  302 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~  302 (320)
                      +++.++++++..      ..+++..+...+..++++.+.+.++...........  ....+.....+..|++|++++|||
T Consensus       236 ~~~~~~~~~~~~------~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~d~~Kak~~LGw  307 (339)
T d1n7ha_         236 EAMWLMLQQEKP------DDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQ--RYFRPAEVDNLQGDASKAKEVLGW  307 (339)
T ss_dssp             HHHHHHHTSSSC------CEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECG--GGSCSSCCCBCCBCCHHHHHHHCC
T ss_pred             HHHHHHHhcCCC------CccccccccccccchhhhhhhhhhhcccCceeeecc--CCCCCCCCCeeeECHHHHHHHHCC
Confidence            999999998533      256777788899999999999999976543222111  112223445667899999999999


Q ss_pred             Cc-cCHHHHHHHHHhhh
Q 020880          303 DP-VTYKDGVKLTLAAE  318 (320)
Q Consensus       303 ~~-~~~~~~l~~~i~~~  318 (320)
                      +| ++++++|+++++|.
T Consensus       308 ~P~~~le~gi~~ti~~~  324 (339)
T d1n7ha_         308 KPQVGFEKLVKMMVDED  324 (339)
T ss_dssp             CCCSCHHHHHHHHHHHH
T ss_pred             CcCCCHHHHHHHHHHHH
Confidence            99 89999999999986

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=1.5e-44  Score=305.72  Aligned_cols=278  Identities=21%  Similarity=0.313  Sum_probs=235.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |||||||||||||++|+++|+++|   ++|++++|++                  .|+.|.+.++++++.. ++|+|||+
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g---~~Vi~~~r~~------------------~D~~d~~~~~~~l~~~-~~d~vih~   59 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKN---VEVIPTDVQD------------------LDITNVLAVNKFFNEK-KPNVVINC   59 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSS---EEEEEECTTT------------------CCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC---CEEEEeechh------------------ccCCCHHHHHHHHHHc-CCCEEEee
Confidence            679999999999999999999999   8999998862                  4889999999999876 89999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFI  162 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~e~~~  162 (320)
                      |+......+...+......|+.... .+++.+...+. +++++||..+|+.... +.+|.++..|.+.|+.+|...|.++
T Consensus        60 a~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~  137 (281)
T d1vl0a_          60 AAHTAVDKCEEQYDLAYKINAIGPK-NLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFV  137 (281)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHH-HHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ccccccccccccchhhccccccccc-ccccccccccc-cccccccceeeeccccccccccccccchhhhhhhhhHHHHHH
Confidence            9988777777788888888888774 77777776665 8889999999986654 8899999999999999999999999


Q ss_pred             HHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCce
Q 020880          163 YEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL  242 (320)
Q Consensus       163 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  242 (320)
                      ++.+.+++++||+++||++..      +...++ ..+..+....+.+++.++++|++|+++++..++++..      .++
T Consensus       138 ~~~~~~~~i~R~~~vyG~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~------~g~  204 (281)
T d1vl0a_         138 KALNPKYYIVRTAWLYGDGNN------FVKTMI-NLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN------YGT  204 (281)
T ss_dssp             HHHCSSEEEEEECSEESSSSC------HHHHHH-HHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTC------CEE
T ss_pred             HHhCCCccccceeEEeCCCcc------cccchh-hhhccCCceeecCCceeccchhhhhhhhhhhhhhhcc------cCc
Confidence            999999999999999999753      233334 3444677888888999999999999999999998843      248


Q ss_pred             eEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCccCHHHHHHHHHhhhc
Q 020880          243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAEA  319 (320)
Q Consensus       243 ~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~i~~~~  319 (320)
                      ||+++++.+|+.|+++.+.+.+|.+..+. +++...++....++.+..+|++|++++|||+|.+++|+|+++++++|
T Consensus       205 ~~~~~~~~~s~~e~~~~i~~~~g~~~~i~-~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~~~~~~l~~~l~~l~  280 (281)
T d1vl0a_         205 FHCTCKGICSWYDFAVEIFRLTGIDVKVT-PCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLLQ  280 (281)
T ss_dssp             EECCCBSCEEHHHHHHHHHHHHCCCCEEE-EECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHHT
T ss_pred             eeEeCCCccchHHHHHHHHHHhCCCceEE-eccHHHcCCcCCCccccccCHHHHHHHhCCCCCCHHHHHHHHHHHhc
Confidence            99999999999999999999999987654 34433333334455666789999999999999999999999999987

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=6.1e-45  Score=321.41  Aligned_cols=307  Identities=20%  Similarity=0.201  Sum_probs=236.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhh-ccCCCceEEEecC---CCC------Chhh---hhhh--------CCCcceEEEeeC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSE-IEGKPYDVAATHH---STP------LPQL---LLDA--------LPHSFVFFDVDL   61 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~-~g~~v~~v~~~~r---~~~------~~~~---~~~~--------~~~~~~~~~~Dl   61 (320)
                      .|||||||||||||++|+++|++ .|   ++|+++++   +..      ....   ....        ......++.+|+
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~---~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di   78 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTN---HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDV   78 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCC---CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCT
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCC---CEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcc
Confidence            47999999999999999999997 46   78888753   111      1111   1110        124577899999


Q ss_pred             CCcccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-----
Q 020880           62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-----  136 (320)
Q Consensus        62 ~d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-----  136 (320)
                      +|.+.+.++++....+|+|||+|+.........++...++.|+.++. ++++++++.++++++++||..+|+...     
T Consensus        79 ~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~-~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  157 (383)
T d1gy8a_          79 RNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGIL-RLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVS  157 (383)
T ss_dssp             TCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHH-HHHHHHHHTTCCEEEEEEEGGGTBSCCC----
T ss_pred             cCHHHhhhhhhccceeehhhccccccccccccccccccccccccccc-ccchhhhccCCccccccccccccccccccccc
Confidence            99999999998776789999999988776666778888999999996 999999999999999999999998542     


Q ss_pred             ---CCCcccCCCCCcchHHHHHHHHHHHHHHH----cCCeeEEeecccccCCCCCCCC------CCChHHHHHHHH----
Q 020880          137 ---SFYKEEDEIAPVNVYGKSKVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVP------KSLPIQWIDSVL----  199 (320)
Q Consensus       137 ---~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~------~~~~~~~~~~~~----  199 (320)
                         .++.|+++.+|.++|+.+|...|++++.+    +.+++++||+++|||++.....      ..++..++..++    
T Consensus       158 ~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~  237 (383)
T d1gy8a_         158 TNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIA  237 (383)
T ss_dssp             -CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHS
T ss_pred             ccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcc
Confidence               25778888999999999999999988764    6789999999999998753321      122222222222    


Q ss_pred             -----------hcCCceEeec--------CcccCceeHHHHHHHHHHHHhhhhccc----cccCceeEecCCCCcCHHHH
Q 020880          200 -----------SKGEKVEFFH--------DECRCPVYVRDVVKIILALTNRWLSED----KQMQLLLNVGGPDRVSRVQM  256 (320)
Q Consensus       200 -----------~~~~~~~~~~--------~~~~~~i~v~D~a~~~~~~~~~~~~~~----~~~~~~~n~~~~~~~s~~e~  256 (320)
                                 ..+.++.+.|        .+.|+|+|++|+|++++.+++.....+    ...+++||+++++.+|+.|+
T Consensus       238 ~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el  317 (383)
T d1gy8a_         238 PDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREV  317 (383)
T ss_dssp             CC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHH
T ss_pred             ccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHH
Confidence                       2244555554        357899999999999999998754322    22456999999999999999


Q ss_pred             HHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHH-Hhhhc
Q 020880          257 AEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLT-LAAEA  319 (320)
Q Consensus       257 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~-i~~~~  319 (320)
                      ++.+.+.++.+.++...      ...........+|++|++++|||+| ++++|+|+++ +.|.+
T Consensus       318 ~~~i~~~~~~~~~~~~~------~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~  376 (383)
T d1gy8a_         318 IEVARKTTGHPIPVREC------GRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQR  376 (383)
T ss_dssp             HHHHHHHHCCCCCEEEE------CCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCceEEC------CCCCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHH
Confidence            99999999987654322      1222344567789999999999999 8999999987 57764

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-43  Score=304.50  Aligned_cols=289  Identities=17%  Similarity=0.190  Sum_probs=224.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ++|||||||||||||++|+++|+++|   +.|+.+.+..                 ..|+.|.+.+.++++.. .+|.|+
T Consensus         1 ~kkkIlITG~tGfiG~~l~~~L~~~g---~~vi~~~~~~-----------------~~~~~~~~~~~~~~~~~-~~d~v~   59 (315)
T d1e6ua_           1 AKQRVFIAGHRGMVGSAIRRQLEQRG---DVELVLRTRD-----------------ELNLLDSRAVHDFFASE-RIDQVY   59 (315)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCT---TEEEECCCTT-----------------TCCTTCHHHHHHHHHHH-CCSEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCc---CEEEEecCch-----------------hccccCHHHHHHHHhhc-CCCEEE
Confidence            47899999999999999999999999   6666654432                 35888999998888764 899999


Q ss_pred             ECCCccCcc-ccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCC-----CCcchHHHH
Q 020880           82 NCAALSVPR-VCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEI-----APVNVYGKS  154 (320)
Q Consensus        82 h~a~~~~~~-~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~-----~p~~~Y~~s  154 (320)
                      |+|+..... ....++...++.|+.++. +++++|.+.++++|||+||.++||.... +++|+.+.     .|.++|+.+
T Consensus        60 ~~a~~~~~~~~~~~~~~~~~~~Nv~gt~-~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~s  138 (315)
T d1e6ua_          60 LAAAKVGGIVANNTYPADFIYQNMMIES-NIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIA  138 (315)
T ss_dssp             ECCCCCCCHHHHHHCHHHHHHHHHHHHH-HHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHH
T ss_pred             EcchhccccccchhhHHHHHHHHHHHHH-HHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHH
Confidence            999876442 234466777899999996 9999999999999999999999997654 77877543     245689999


Q ss_pred             HHHHHHHHHHH----cCCeeEEeecccccCCCCCCCCCCChH-----HHHHHHHhcCCceEeecC--cccCceeHHHHHH
Q 020880          155 KVAAEKFIYEK----CSNFAILRSSIIYGPQTISPVPKSLPI-----QWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVK  223 (320)
Q Consensus       155 K~~~e~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~  223 (320)
                      |.++|++++.+    +.+++++||++||||++..........     .........+..+.+.++  ..++|+|++|+++
T Consensus       139 K~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~  218 (315)
T d1e6ua_         139 KIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAA  218 (315)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHH
Confidence            99999988754    568999999999999875433222221     112233446777888765  5799999999999


Q ss_pred             HHHHHHhhhhcc----ccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhh
Q 020880          224 IILALTNRWLSE----DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT  299 (320)
Q Consensus       224 ~~~~~~~~~~~~----~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  299 (320)
                      ++..++.+....    .......+|++.+...++.++++.+.+.++.+..+....      ..+.......+|++|++ +
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~------~~~~~~~~~~~d~sk~k-~  291 (315)
T d1e6ua_         219 ASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDA------SKPDGTPRKLLDVTRLH-Q  291 (315)
T ss_dssp             HHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEET------TSCCCCSBCCBCCHHHH-H
T ss_pred             HHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECC------CCCCCCceeccCHHHHH-H
Confidence            999999775432    223456899999999999999999999999876543211      11223344678999996 5


Q ss_pred             cCCCc-cCHHHHHHHHHhhhc
Q 020880          300 LNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       300 lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      |||+| ++++|+|+++++|++
T Consensus       292 Lg~~p~~~l~e~i~~ti~w~~  312 (315)
T d1e6ua_         292 LGWYHEISLEAGLASTYQWFL  312 (315)
T ss_dssp             TTCCCCCCHHHHHHHHHHHHH
T ss_pred             cCCCCCCCHHHHHHHHHHHHH
Confidence            99999 899999999999975

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=1.8e-43  Score=306.62  Aligned_cols=302  Identities=18%  Similarity=0.249  Sum_probs=231.6

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC--Chhhhhh-hCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP--LPQLLLD-ALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~--~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ||||||||||||+||+++|+++|   ++|+++++-..  ....+.. ....+++++.+|++|.+.+.++++.. ++|+||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g---~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-~~d~Vi   77 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQG---IDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-MPDSCF   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-CCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCc---CEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-CCceEE
Confidence            79999999999999999999999   78888754322  1111111 12357899999999999999999876 789999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccC-C-----------------CCcccC
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-S-----------------FYKEED  143 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-~-----------------~~~E~~  143 (320)
                      |+|+.........++...+++|+.|+. +++++|.+.+++++|+.||..+++... .                 ...+.+
T Consensus        78 h~aa~~~~~~~~~~~~~~~~~Nv~gt~-nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (338)
T d1orra_          78 HLAGQVAMTTSIDNPCMDFEINVGGTL-NLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDEST  156 (338)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHH-HHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTS
T ss_pred             eecccccccccccChHHHHHHHHHHHH-HHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCC
Confidence            999998776666788999999999996 999999999987777766655544321 1                 123445


Q ss_pred             CCCCcchHHHHHHHHHHHHHH----HcCCeeEEeecccccCCCCCCCCCCChHHHHHHHH----hcCCceEeecC--ccc
Q 020880          144 EIAPVNVYGKSKVAAEKFIYE----KCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVL----SKGEKVEFFHD--ECR  213 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~  213 (320)
                      +..|.+.|+.+|...|.++..    ++....++|++.+||+..........+..++...+    ..++++.++|+  ..|
T Consensus       157 ~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  236 (338)
T d1orra_         157 QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR  236 (338)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred             ccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeE
Confidence            667889999999999997655    45678899999999887654444444444444433    24677888775  589


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecC--CCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCcccc
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG--PDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM  291 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~--~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (320)
                      +|+|++|++++++.++++...   ..+++||+..  +..+++.|+++.+.+..+.+.++...      +........+.+
T Consensus       237 ~~~~v~D~~~~~~~~l~~~~~---~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~  307 (338)
T d1orra_         237 DVLHAEDMISLYFTALANVSK---IRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNL------PVRESDQRVFVA  307 (338)
T ss_dssp             ECEEHHHHHHHHHHHHHTHHH---HTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEE------CCCSSCCSEECB
T ss_pred             eeecccchhhHHHHHHhcccc---ccCccccccccccccccHHHHHHHHHHHHCCCceeEeC------CCCCCCcCeeeE
Confidence            999999999999999987532   2345889854  45689999999999999987654321      122234455678


Q ss_pred             ChHHHHhhcCCCc-cCHHHHHHHHHhhhcC
Q 020880          292 DITKLVQTLNIDP-VTYKDGVKLTLAAEAT  320 (320)
Q Consensus       292 d~~k~~~~lg~~~-~~~~~~l~~~i~~~~~  320 (320)
                      |++|++++|||+| ++++|+|+++++|+|+
T Consensus       308 d~~k~~~~Lg~~p~~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         308 DIKKITNAIDWSPKVSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             CCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence            9999999999999 8999999999999874

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.7e-43  Score=311.04  Aligned_cols=306  Identities=19%  Similarity=0.137  Sum_probs=221.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC-------------C---CCChhh----hhhhCCCcceEEEeeCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-------------S---TPLPQL----LLDALPHSFVFFDVDLK   62 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r-------------~---~~~~~~----~~~~~~~~~~~~~~Dl~   62 (320)
                      +|||||||||||||++|+++|+++|   ++|++++.             +   ......    +......+++++.+|++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g---~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~   77 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKN---YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   77 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCC
Confidence            5899999999999999999999999   78887641             1   111111    11112467899999999


Q ss_pred             CcccHHHHHHHhCCCCEEEECCCccCccccccC---chhhhhccccccHHHHHhhhhhccCc-eEEEeechhhhcccCCC
Q 020880           63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCEND---PDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTDQVYEGVKSF  138 (320)
Q Consensus        63 d~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~---~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~  138 (320)
                      |.+.+.++++.. ++|+|||+||......+..+   +...++.|+.++. +++++|++.+++ ++++.||..+|+....+
T Consensus        78 d~~~l~~~~~~~-~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~-nll~~~~~~~~~~~~i~~ss~~~~~~~~~~  155 (393)
T d1i24a_          78 DFEFLAESFKSF-EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTL-NVLFAIKEFGEECHLVKLGTMGEYGTPNID  155 (393)
T ss_dssp             SHHHHHHHHHHH-CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHH-HHHHHHHHHCTTCEEEEECCGGGGCCCSSC
T ss_pred             CHHHHHHHHHhh-cchheecccccccccccccccccccccccccccccc-HHHHHHHHhccccceeeccccccccccccc
Confidence            999999999876 89999999998766554444   4467889999996 999999998865 67888888888754432


Q ss_pred             Cc--------------ccCCCCCcchHHHHHHHHHHHHHH----HcCCeeEEeecccccCCCCCCC--------------
Q 020880          139 YK--------------EEDEIAPVNVYGKSKVAAEKFIYE----KCSNFAILRSSIIYGPQTISPV--------------  186 (320)
Q Consensus       139 ~~--------------E~~~~~p~~~Y~~sK~~~e~~~~~----~~~~~~ilR~~~v~G~~~~~~~--------------  186 (320)
                      ..              |..+..|.++|+.+|..+|.+++.    ++.+++++||++||||+.....              
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  235 (393)
T d1i24a_         156 IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAV  235 (393)
T ss_dssp             BCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTT
T ss_pred             cccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccc
Confidence            22              223567889999999999998764    4678999999999999753210              


Q ss_pred             CCCChHHHHHHHHhcCCceEeecC--cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHh
Q 020880          187 PKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIR  264 (320)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~  264 (320)
                      ....+..++.+ ...++++.++|+  +.|+|+|++|+|++++.++++....+.  ...+| .+++.+|+.|+++.+.+..
T Consensus       236 ~~~~i~~~~~~-~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~--~~~~~-~~~~~~si~el~~~i~~~~  311 (393)
T d1i24a_         236 FGTALNRFCVQ-AAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGE--FRVFN-QFTEQFSVNELASLVTKAG  311 (393)
T ss_dssp             TCCHHHHHHHH-HHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTC--EEEEE-ECSEEEEHHHHHHHHHHHH
T ss_pred             cccchhhhhHH-hhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccce--eeeec-CCCCeeEHHHHHHHHHHHH
Confidence            11223334443 446888998875  589999999999999999988654432  11233 3456799999999998876


Q ss_pred             CCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          265 GYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      +......... ....+........+..|++|+++ |||+| ++++++++++++|++
T Consensus       312 ~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~k~~~-LGw~P~~~~~~~i~~~~~~~~  365 (393)
T d1i24a_         312 SKLGLDVKKM-TVPNPRVEAEEHYYNAKHTKLME-LGLEPHYLSDSLLDSLLNFAV  365 (393)
T ss_dssp             HTTTCCCCEE-EECCSSCSCSSCCCCBCCCHHHH-TTCCCCCCCHHHHHHHHHHHH
T ss_pred             HhhCCCccee-eccCCCCCCCccEecCCHHHHHH-cCCccccCHHHHHHHHHHHHH
Confidence            5432211111 01112223345566789999975 89999 999999999999863

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=2.3e-42  Score=302.00  Aligned_cols=305  Identities=17%  Similarity=0.202  Sum_probs=233.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh--CCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA--LPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      +|||||||||||||++|+++|+++|   ++|+++.|+.+....+...  ..++++++.+|++|++.+.++++.. .+|+|
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g---~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-~~~~v   83 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-QPEIV   83 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-CCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc-hhhhh
Confidence            6899999999999999999999999   8999999987765544433  2457999999999999999888865 89999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeechhhhcccCC--CCcccCCCCCcchHHHHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTDQVYEGVKS--FYKEEDEIAPVNVYGKSKVA  157 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~--~~~E~~~~~p~~~Y~~sK~~  157 (320)
                      +|+|+......+..+|...+.+|+.++. ++++++.+.+.. .+++.||..++.....  +.+|+++..|.++|+.+|..
T Consensus        84 ~~~aa~~~~~~~~~~~~~~~~~Nv~g~~-n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~  162 (356)
T d1rkxa_          84 FHMAAQPLVRLSYSEPVETYSTNVMGTV-YLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGC  162 (356)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHH-HHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHH
T ss_pred             hhhhccccccccccCCccccccccccch-hhhhhhhccccccccccccccccccccccccccccccccCCCCcccccccc
Confidence            9999988776667788999999999996 999999987654 5555555555544333  67788888999999999999


Q ss_pred             HHHHHHHH-------------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEee-cCcccCceeHHHHHH
Q 020880          158 AEKFIYEK-------------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFF-HDECRCPVYVRDVVK  223 (320)
Q Consensus       158 ~e~~~~~~-------------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~  223 (320)
                      .|..+..+             +..++++||+++|||++..  ...++..++.. ...+.++... +++.++++|++|+|+
T Consensus       163 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~--~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~v~D~~~  239 (356)
T d1rkxa_         163 AELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA--LDRIVPDILRA-FEQSQPVIIRNPHAIRPWQHVLEPLS  239 (356)
T ss_dssp             HHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC--SSCHHHHHHHH-HHTTCCEECSCTTCEECCEETHHHHH
T ss_pred             chhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcch--hhHHHHHHHHH-HhCCCceEEeeccccccccccccccc
Confidence            99877643             3467899999999998632  23344444444 4344444332 346899999999999


Q ss_pred             HHHHHHhhhhccccccCceeEe--cCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcC
Q 020880          224 IILALTNRWLSEDKQMQLLLNV--GGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN  301 (320)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~n~--~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg  301 (320)
                      ++..++.+....+.......+.  ..+..+++.++++.+.+.++....+....     ...+.....+.+|++|++++||
T Consensus       240 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~d~skak~~LG  314 (356)
T d1rkxa_         240 GYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDG-----NAHPHEAHYLKLDCSKAKMQLG  314 (356)
T ss_dssp             HHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC------------CCCCCCBCCHHHHHHHC
T ss_pred             hhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcC-----CCCCCCcCeeeEcHHHHHHHHC
Confidence            9999998876554433333333  34467899999999999999876543211     1122234556789999999999


Q ss_pred             CCc-cCHHHHHHHHHhhhcC
Q 020880          302 IDP-VTYKDGVKLTLAAEAT  320 (320)
Q Consensus       302 ~~~-~~~~~~l~~~i~~~~~  320 (320)
                      |+| ++++++|+++++|+++
T Consensus       315 w~P~~~l~egi~~ti~wyk~  334 (356)
T d1rkxa_         315 WHPRWNLNTTLEYIVGWHKN  334 (356)
T ss_dssp             CCCCCCHHHHHHHHHHHHHH
T ss_pred             CCcCCCHHHHHHHHHHHHHH
Confidence            999 9999999999998763

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=100.00  E-value=4.1e-41  Score=286.59  Aligned_cols=289  Identities=23%  Similarity=0.319  Sum_probs=229.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |||||||||||||++|+++|+++|   +.|....|+..               +.+|++|.+.++++++.. ++|+||||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g---~~v~~~~~~~~---------------~~~Dl~~~~~~~~~i~~~-~~D~Vih~   61 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVG---NLIALDVHSKE---------------FCGDFSNPKGVAETVRKL-RPDVIVNA   61 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTS---EEEEECTTCSS---------------SCCCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC---CEEEEECCCcc---------------ccCcCCCHHHHHHHHHHc-CCCEEEEe
Confidence            579999999999999999999998   55544433321               468999999999999876 89999999


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCC-CCcccCCCCCcchHHHHHHHHHHHH
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFI  162 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~E~~~~~p~~~Y~~sK~~~e~~~  162 (320)
                      ||...+..+..++...+..|+.++. +++++|++.++ +++++||+++|+.... +++|+++..|.+.|+.+|..+|.++
T Consensus        62 Aa~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~  139 (298)
T d1n2sa_          62 AAHTAVDKAESEPELAQLLNATSVE-AIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKAL  139 (298)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHH-HHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             cccccccccccCccccccccccccc-cchhhhhcccc-ccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhH
Confidence            9988877778889999999999995 99999998887 7999999998876554 8999999999999999999999999


Q ss_pred             HHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCce
Q 020880          163 YEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL  242 (320)
Q Consensus       163 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  242 (320)
                      +.+..+..++|++..|+....      .....+...+..+.++...++..++++|+.|+++++..++...... ...+++
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~-~~~~~~  212 (298)
T d1n2sa_         140 QDNCPKHLIFRTSWVYAGKGN------NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNK-PEVAGL  212 (298)
T ss_dssp             HHHCSSEEEEEECSEECSSSC------CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHC-GGGCEE
T ss_pred             HhhhcccccccccceeeccCC------ccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhcc-cccccc
Confidence            998888888887777654321      1223444556677888888888999999999999999888754332 234679


Q ss_pred             eEecCCCCcCHHHHHHHHHHHhCCCCC---c--cccCCccccCCCCCCCCccccChHHHHhhcCCCccCHHHHHHHHHhh
Q 020880          243 LNVGGPDRVSRVQMAEVVAEIRGYSTS---L--IKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAA  317 (320)
Q Consensus       243 ~n~~~~~~~s~~e~~~~i~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~i~~  317 (320)
                      ||+++++.++..++++.+.+..+....   .  +.+++...+.....++.+..+|++|+++.|||+|++++++|++++++
T Consensus       213 ~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~~~~~~~~gl~~~i~~  292 (298)
T d1n2sa_         213 YHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTE  292 (298)
T ss_dssp             EECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCCBHHHHHHHHHHH
T ss_pred             ccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHHHCCCCCcHHHHHHHHHHH
Confidence            999999999999999999877654321   1  11222222222334456668999999999999999999999999998


Q ss_pred             hcC
Q 020880          318 EAT  320 (320)
Q Consensus       318 ~~~  320 (320)
                      +.+
T Consensus       293 ~~~  295 (298)
T d1n2sa_         293 MFT  295 (298)
T ss_dssp             HHS
T ss_pred             HHh
Confidence            864

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=5.3e-41  Score=291.54  Aligned_cols=297  Identities=16%  Similarity=0.096  Sum_probs=214.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh-----CCCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA-----LPHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      +|+|||||||||||++|+++|+++|   ++|++++|+.++...+...     ......++.+|+.|.+.+.+++.   ++
T Consensus        11 gk~VlVTG~sGfIGs~l~~~Ll~~G---~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~   84 (342)
T d1y1pa1          11 GSLVLVTGANGFVASHVVEQLLEHG---YKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK---GA   84 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT---TC
T ss_pred             cCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc---cc
Confidence            6899999999999999999999999   8999999986554433221     12334457789999999888776   89


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCceEEEeechhhhcccCC-----C-------------
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTDQVYEGVKS-----F-------------  138 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~~vy~~~~~-----~-------------  138 (320)
                      |+|+|+|+....   ..++...++.|+.++. +++++|.+. +++++||+||.++++....     .             
T Consensus        85 ~~v~~~a~~~~~---~~~~~~~~~~nv~gt~-~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~  160 (342)
T d1y1pa1          85 AGVAHIASVVSF---SNKYDEVVTPAIGGTL-NALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDK  160 (342)
T ss_dssp             SEEEECCCCCSC---CSCHHHHHHHHHHHHH-HHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHH
T ss_pred             hhhhhhcccccc---cccccccccchhhhHH-HHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccc
Confidence            999999997643   2456778889999996 999999886 6899999999876432111     1             


Q ss_pred             ---CcccCCCCCcchHHHHHHHHHHHHHHH----cC--CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec
Q 020880          139 ---YKEEDEIAPVNVYGKSKVAAEKFIYEK----CS--NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH  209 (320)
Q Consensus       139 ---~~E~~~~~p~~~Y~~sK~~~e~~~~~~----~~--~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (320)
                         ..|+++.+|.++|+.+|..+|++++.+    +.  +++++||+.+|||...+.........++..++.........+
T Consensus       161 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~  240 (342)
T d1y1pa1         161 AKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALAL  240 (342)
T ss_dssp             HHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHT
T ss_pred             cccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCC
Confidence               235556678889999999999977655    33  457899999999975443344445566666554333334445


Q ss_pred             CcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCcc
Q 020880          210 DECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI  289 (320)
Q Consensus       210 ~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (320)
                      ++.++|+|++|+|++++.+++++...+     .||+++++.+|++|+++.|.+.++.... ....+..   .......+.
T Consensus       241 ~~~~~~v~v~Dva~~~i~~l~~~~~~g-----~~~~~~~~~~t~~eia~~i~k~~p~~~~-~~~~~~~---~~~~~~~~~  311 (342)
T d1y1pa1         241 MPPQYYVSAVDIGLLHLGCLVLPQIER-----RRVYGTAGTFDWNTVLATFRKLYPSKTF-PADFPDQ---GQDLSKFDT  311 (342)
T ss_dssp             CCSEEEEEHHHHHHHHHHHHHCTTCCS-----CEEEECCEEECHHHHHHHHHHHCTTSCC-CCCCCCC---CCCCCEECC
T ss_pred             ccceeeeeHHHHHHHHHHhhcCccccc-----eEEEEcCCceEHHHHHHHHHHHcCCCcC-CccCCcc---Ccccccccc
Confidence            678899999999999999999865443     4778888999999999999998743221 1111110   000011111


Q ss_pred             ccChHHHHhhcCCCc-cCHHHHHHHHHhhhc
Q 020880          290 SMDITKLVQTLNIDP-VTYKDGVKLTLAAEA  319 (320)
Q Consensus       290 ~~d~~k~~~~lg~~~-~~~~~~l~~~i~~~~  319 (320)
                      .. +.+..+.|||++ ++++|+|++++++..
T Consensus       312 ~~-s~~~~k~lg~~~~~~lee~i~d~I~s~~  341 (342)
T d1y1pa1         312 AP-SLEILKSLGRPGWRSIEESIKDLVGSET  341 (342)
T ss_dssp             HH-HHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred             hH-HHHHHHHcCCCCCcCHHHHHHHHHHhCc
Confidence            22 234446699999 899999999998753

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.6e-37  Score=261.42  Aligned_cols=294  Identities=21%  Similarity=0.228  Sum_probs=191.8

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHH-HHHH--HhCCCCEEEE
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFD-AVAL--KFGQPDVVVN   82 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~--~~~~~d~Vih   82 (320)
                      |||||||||||++|+++|+++|+  ++|+++.+-.... ........    ...|..+.+.+. ....  .+..+++|+|
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~--~~V~~~d~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   74 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGI--TDILVVDNLKDGT-KFVNLVDL----NIADYMDKEDFLIQIMAGEEFGDVEAIFH   74 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTC--CCEEEEECCSSGG-GGHHHHTS----CCSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCC--CeEEEEECCCCcc-hhhccccc----chhhhccchHHHHHHhhhhcccchhhhhh
Confidence            89999999999999999999994  3677764332211 11110001    122222222222 2221  1246899999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhccc-CCCCcccCCCCCcchHHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKF  161 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~-~~~~~E~~~~~p~~~Y~~sK~~~e~~  161 (320)
                      +|+.....  ..+.+.....|+.++. +++++++..++ ++|+.||..+|+.. ....+|+.+..|.+.|+.+|..+|.+
T Consensus        75 ~aa~~~~~--~~~~~~~~~~~~~~~~-~~l~~~~~~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~  150 (307)
T d1eq2a_          75 EGACSSTT--EWDGKYMMDNNYQYSK-ELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEY  150 (307)
T ss_dssp             CCSCCCTT--CCCHHHHHHHTHHHHH-HHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred             hccccccc--cccccccccccccccc-ccccccccccc-cccccccccccccccccccccccccccccccccccchhhhh
Confidence            99875443  3355677788888885 99999999998 56777777666544 44667777788999999999999999


Q ss_pred             HHHH----cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceE-eecC--cccCceeHHHHHHHHHHHHhhhhc
Q 020880          162 IYEK----CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVE-FFHD--ECRCPVYVRDVVKIILALTNRWLS  234 (320)
Q Consensus       162 ~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~i~v~D~a~~~~~~~~~~~~  234 (320)
                      ++.+    +.+++++||+++|||..............+...+..++... ..|+  ..++|+|++|+++++..++.+.. 
T Consensus       151 ~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~-  229 (307)
T d1eq2a_         151 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-  229 (307)
T ss_dssp             HHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-
T ss_pred             ccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc-
Confidence            8876    45789999999999987533222333333334444555443 3344  47899999999999999998742 


Q ss_pred             cccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCccccCCccccCCCCCCCCccccChHHHHhhcCCCc-cCHHHHHHH
Q 020880          235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP-VTYKDGVKL  313 (320)
Q Consensus       235 ~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~-~~~~~~l~~  313 (320)
                           ...||+++++.+|++|+++.+.+..+.......+.+.   ............|++|+++++||+| ++++|+|++
T Consensus       230 -----~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~---~~~~~~~~~~~~d~~k~~~~~~~~p~~sl~egi~~  301 (307)
T d1eq2a_         230 -----SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPD---KLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTE  301 (307)
T ss_dssp             -----CEEEEESCSCCBCHHHHHHHC------------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHH
T ss_pred             -----ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCc---cCCCCCceeeecCHHHHHHHHCCCCCCCHHHHHHH
Confidence                 3489999999999999999998876543211111111   0111123334569999999999999 999999999


Q ss_pred             HHhhhc
Q 020880          314 TLAAEA  319 (320)
Q Consensus       314 ~i~~~~  319 (320)
                      +++|++
T Consensus       302 ~i~w~~  307 (307)
T d1eq2a_         302 YMAWLN  307 (307)
T ss_dssp             HHHHTC
T ss_pred             HHHhCC
Confidence            999974

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.5e-31  Score=213.41  Aligned_cols=202  Identities=11%  Similarity=0.044  Sum_probs=156.7

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |.||||+||||||+||++++++|+++|   ++|+++.|++++....   ...+++++.+|++|++++.++++   ++|+|
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g---~~V~~~~R~~~~~~~~---~~~~~~~~~gD~~d~~~l~~al~---~~d~v   71 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVRDSSRLPSE---GPRPAHVVVGDVLQAADVDKTVA---GQDAV   71 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCGGGSCSS---SCCCSEEEESCTTSHHHHHHHHT---TCSEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEEcChhhcccc---cccccccccccccchhhHHHHhc---CCCEE
Confidence            899999999999999999999999999   8999999986654322   23578899999999999988887   89999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK  160 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  160 (320)
                      ||++|.....       ....++..++ .++++++++++++|+|++||..++++...      .......|...|..+|+
T Consensus        72 i~~~g~~~~~-------~~~~~~~~~~-~~l~~aa~~~~v~r~i~~ss~~~~~~~~~------~~~~~~~~~~~~~~~e~  137 (205)
T d1hdoa_          72 IVLLGTRNDL-------SPTTVMSEGA-RNIVAAMKAHGVDKVVACTSAFLLWDPTK------VPPRLQAVTDDHIRMHK  137 (205)
T ss_dssp             EECCCCTTCC-------SCCCHHHHHH-HHHHHHHHHHTCCEEEEECCGGGTSCTTC------SCGGGHHHHHHHHHHHH
T ss_pred             EEEeccCCch-------hhhhhhHHHH-HHHHHHHHhcCCCeEEEEeeeeccCCCcc------ccccccccchHHHHHHH
Confidence            9999864321       1123455566 49999999999999999999998865432      11224578999999999


Q ss_pred             HHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccC
Q 020880          161 FIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ  240 (320)
Q Consensus       161 ~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  240 (320)
                      ++++.+.+|+++||+.+++....                 ....+...+.....+|+++|+|++++.+++++.-    .+
T Consensus       138 ~l~~~~~~~tiirp~~~~~~~~~-----------------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~----~g  196 (205)
T d1hdoa_         138 VLRESGLKYVAVMPPHIGDQPLT-----------------GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEY----DG  196 (205)
T ss_dssp             HHHHTCSEEEEECCSEEECCCCC-----------------SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTT----TT
T ss_pred             HHHhcCCceEEEecceecCCCCc-----------------ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCC----CC
Confidence            99999999999999999874321                 1112222344567889999999999999988532    24


Q ss_pred             ceeEec
Q 020880          241 LLLNVG  246 (320)
Q Consensus       241 ~~~n~~  246 (320)
                      +.+.++
T Consensus       197 ~~~~~s  202 (205)
T d1hdoa_         197 HSTYPS  202 (205)
T ss_dssp             CEEEEE
T ss_pred             EEEecC
Confidence            466554

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.9e-31  Score=217.07  Aligned_cols=202  Identities=15%  Similarity=0.074  Sum_probs=152.4

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |++|+|||||||||||++|+++|+++|.- .+|++++|++.......   ...+....+|+.+.+.+.+.++   ++|+|
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~-~~v~~~~R~~~~~~~~~---~~~i~~~~~D~~~~~~~~~~~~---~~d~v   84 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLF-SKVTLIGRRKLTFDEEA---YKNVNQEVVDFEKLDDYASAFQ---GHDVG   84 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCC-SEEEEEESSCCCCCSGG---GGGCEEEECCGGGGGGGGGGGS---SCSEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCC-CEEEEEecChhhhcccc---cceeeeeeeccccccccccccc---ccccc
Confidence            67789999999999999999999999942 37999999865433211   2356777788888877766665   89999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK  160 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  160 (320)
                      ||++|....   ..++....++|+.++. +++++|.+.++++|||+||..+++.            +.+.|+++|..+|+
T Consensus        85 i~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~a~~~~v~~fi~~Ss~~~~~~------------~~~~Y~~~K~~~E~  148 (232)
T d2bkaa1          85 FCCLGTTRG---KAGAEGFVRVDRDYVL-KSAELAKAGGCKHFNLLSSKGADKS------------SNFLYLQVKGEVEA  148 (232)
T ss_dssp             EECCCCCHH---HHHHHHHHHHHTHHHH-HHHHHHHHTTCCEEEEECCTTCCTT------------CSSHHHHHHHHHHH
T ss_pred             ccccccccc---ccchhhhhhhcccccc-eeeecccccCccccccCCccccccC------------ccchhHHHHHHhhh
Confidence            999986522   2245667889999985 9999999999999999999988753            34589999999999


Q ss_pred             HHHHHcCC-eeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec-CcccCceeHHHHHHHHHHHHhhhhc
Q 020880          161 FIYEKCSN-FAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH-DECRCPVYVRDVVKIILALTNRWLS  234 (320)
Q Consensus       161 ~~~~~~~~-~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~D~a~~~~~~~~~~~~  234 (320)
                      .+.+.+.+ ++|+||+.+||++...    .+...++...+ ..    +++ ......||++|+|++++.++..+..
T Consensus       149 ~l~~~~~~~~~IlRP~~i~G~~~~~----~~~~~~~~~~~-~~----~~~~~~~~~~I~~~dvA~a~i~~~~~~~~  215 (232)
T d2bkaa1         149 KVEELKFDRYSVFRPGVLLCDRQES----RPGEWLVRKFF-GS----LPDSWASGHSVPVVTVVRAMLNNVVRPRD  215 (232)
T ss_dssp             HHHTTCCSEEEEEECCEEECTTGGG----SHHHHHHHHHH-CS----CCTTGGGGTEEEHHHHHHHHHHHHTSCCC
T ss_pred             ccccccccceEEecCceeecCCCcC----cHHHHHHHHHh-hc----cCCcccCCCeEEHHHHHHHHHHHHhcCcc
Confidence            99998864 8999999999987631    11111222221 11    111 1344579999999999999887543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.97  E-value=1.2e-30  Score=222.74  Aligned_cols=237  Identities=16%  Similarity=0.129  Sum_probs=178.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhh-----hhhhCCCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-----LLDALPHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~-----~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      .++||||||||||||++|+++|+++|   ++|++++|+......     +......+++++.+|+.|.+.+.+.+.   +
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G---~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~---~   75 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLG---HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK---Q   75 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT---T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc---C
Confidence            36789999999999999999999999   889999997654321     111113568899999999998888776   8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHH
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKV  156 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~  156 (320)
                      +++++|+++....           ..|..++. ++++++++.+..+++++||..++..     .+..+..|...|..+|.
T Consensus        76 ~~~~~~~~~~~~~-----------~~~~~~~~-~~l~~a~~~~~~~~v~~Ss~g~~~~-----~~~~~~~~~~~~~~~~~  138 (312)
T d1qyda_          76 VDVVISALAGGVL-----------SHHILEQL-KLVEAIKEAGNIKRFLPSEFGMDPD-----IMEHALQPGSITFIDKR  138 (312)
T ss_dssp             CSEEEECCCCSSS-----------STTTTTHH-HHHHHHHHSCCCSEEECSCCSSCTT-----SCCCCCSSTTHHHHHHH
T ss_pred             cchhhhhhhhccc-----------ccchhhhh-HHHHHHHHhcCCcEEEEeeccccCC-----CcccccchhhhhhHHHH
Confidence            9999999875322           23555553 8888888888778899988665433     23445567788999999


Q ss_pred             HHHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec--CcccCceeHHHHHHHHHHHHhhhhc
Q 020880          157 AAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRDVVKIILALTNRWLS  234 (320)
Q Consensus       157 ~~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~a~~~~~~~~~~~~  234 (320)
                      .++++.+..+.+++++||+.+||+.........      ......+..+.+++  +..++|||++|+|++++.++.++..
T Consensus       139 ~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~  212 (312)
T d1qyda_         139 KVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLD------GHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT  212 (312)
T ss_dssp             HHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTT------CCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGG
T ss_pred             HHHHhhcccccceEEeccceeecCCccchhhHH------HHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccc
Confidence            999999999999999999999997653221111      11122345555555  4689999999999999999988644


Q ss_pred             cccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCc
Q 020880          235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSL  270 (320)
Q Consensus       235 ~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~  270 (320)
                      .+   +.+|++++++.+|++|+++.+.+.+|.+.+.
T Consensus       213 ~~---~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~  245 (312)
T d1qyda_         213 LN---KTMYIRPPMNILSQKEVIQIWERLSEQNLDK  245 (312)
T ss_dssp             SS---SEEECCCGGGEEEHHHHHHHHHHHHTCCCEE
T ss_pred             cC---ceEEEeCCCcCCCHHHHHHHHHHHHCCCCeE
Confidence            33   2256777777899999999999999988654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.97  E-value=4.1e-30  Score=218.52  Aligned_cols=231  Identities=13%  Similarity=0.064  Sum_probs=174.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhh------hhCCCcceEEEeeCCCcccHHHHHHHhC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL------DALPHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      ++|||||||||||||++++++|+++|   ++|++++|++.......      ......+.++.+|+.+...+.+.++   
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G---~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLG---HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK---   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH---
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh---
Confidence            57899999999999999999999999   88999999866532211      1113567889999999998888777   


Q ss_pred             CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHH
Q 020880           76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSK  155 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK  155 (320)
                      +++.|+|+++..               +..++ .++++++...+++++++.||.....      ++.....+...+...+
T Consensus        76 ~~~~vi~~~~~~---------------~~~~~-~~~~~a~~~~~~~~~~~~s~~~~~~------~~~~~~~~~~~~~~~~  133 (307)
T d1qyca_          76 NVDVVISTVGSL---------------QIESQ-VNIIKAIKEVGTVKRFFPSEFGNDV------DNVHAVEPAKSVFEVK  133 (307)
T ss_dssp             TCSEEEECCCGG---------------GSGGG-HHHHHHHHHHCCCSEEECSCCSSCT------TSCCCCTTHHHHHHHH
T ss_pred             hceeeeeccccc---------------ccchh-hHHHHHHHHhccccceeeecccccc------cccccccccccccccc
Confidence            899999998643               22233 3888888888888899888764432      2233344556788889


Q ss_pred             HHHHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeec--CcccCceeHHHHHHHHHHHHhhhh
Q 020880          156 VAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRDVVKIILALTNRWL  233 (320)
Q Consensus       156 ~~~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~a~~~~~~~~~~~  233 (320)
                      ...+.++++.+.+++++||+++||+.......      ++. ....+....+++  ++.++|||++|+|++++.+++++.
T Consensus       134 ~~~~~~~~~~~~~~~i~r~~~v~g~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  206 (307)
T d1qyca_         134 AKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQ------AGL-TAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR  206 (307)
T ss_dssp             HHHHHHHHHHTCCBEEEECCEEHHHHTTTTTC------TTC-SSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG
T ss_pred             ccccchhhccCCCceecccceecCCCccchhh------hhh-hhhhcccceeeecccccccCCcHHHHHHHHHHHhcChh
Confidence            99999999999999999999999986532111      111 122455555554  468999999999999999998764


Q ss_pred             ccccccCceeEecCCCCcCHHHHHHHHHHHhCCCCCc
Q 020880          234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSL  270 (320)
Q Consensus       234 ~~~~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~  270 (320)
                      ..+   +.+||+++++.+|+.|+++.+.+.+|.+...
T Consensus       207 ~~~---~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~  240 (307)
T d1qyca_         207 TLN---KTLYLRLPANTLSLNELVALWEKKIDKTLEK  240 (307)
T ss_dssp             GTT---EEEECCCGGGEEEHHHHHHHHHHHTTSCCEE
T ss_pred             hcC---ceeEEeCCCCccCHHHHHHHHHHHHCCCCcE
Confidence            332   2356777888999999999999999987654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=1.8e-28  Score=201.96  Aligned_cols=231  Identities=12%  Similarity=0.067  Sum_probs=170.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      +|++|||||||||||+++++.|+++|++ +.|+.+.|++++...    ...+++++.+|+++.+.+.++++   ++|+||
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~-v~v~~~~R~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi   73 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDK-FVAKGLVRSAQGKEK----IGGEADVFIGDITDADSINPAFQ---GIDALV   73 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTT-CEEEEEESCHHHHHH----TTCCTTEEECCTTSHHHHHHHHT---TCSEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCc-EEEEEEcCCHHHHHh----ccCCcEEEEeeeccccccccccc---cceeeE
Confidence            4789999999999999999999999976 678888888654433    24568889999999999888877   899999


Q ss_pred             ECCCccCcccc-------------ccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           82 NCAALSVPRVC-------------ENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        82 h~a~~~~~~~~-------------~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      |+|+.......             ...+.....+|+.++. +++..+.....+++.+.|+...+.....     ....+.
T Consensus        74 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~-----~~~~~~  147 (252)
T d2q46a1          74 ILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK-NQIDAAKVAGVKHIVVVGSMGGTNPDHP-----LNKLGN  147 (252)
T ss_dssp             ECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHH-HHHHHHHHHTCSEEEEEEETTTTCTTCG-----GGGGGG
T ss_pred             EEEeeccccccccchhhhhhcccccccchhhhccccccce-eeccccccccccccccccccccCCCCcc-----cccccc
Confidence            99987543211             2234556677888885 8999998888889999998877653221     111234


Q ss_pred             chHHHHHHHHHHHHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHH
Q 020880          149 NVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL  228 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  228 (320)
                      ..|...+...+.+....+.+++++||+++||+.....   ...       ......   ......++||++|+|++++.+
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~-------~~~~~~---~~~~~~~~i~~~Dva~a~~~~  214 (252)
T d2q46a1         148 GNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR---ELL-------VGKDDE---LLQTDTKTVPRADVAEVCIQA  214 (252)
T ss_dssp             CCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSS---CEE-------EESTTG---GGGSSCCEEEHHHHHHHHHHH
T ss_pred             cchhhhhhhhhhhhhcccccceeecceEEECCCcchh---hhh-------hccCcc---cccCCCCeEEHHHHHHHHHHH
Confidence            5788888898989888899999999999999975311   000       000000   122456799999999999999


Q ss_pred             HhhhhccccccCceeEecCCC---CcCHHHHHHHHHHH
Q 020880          229 TNRWLSEDKQMQLLLNVGGPD---RVSRVQMAEVVAEI  263 (320)
Q Consensus       229 ~~~~~~~~~~~~~~~n~~~~~---~~s~~e~~~~i~~~  263 (320)
                      ++++...    +++||++++.   ..+++++.+.+.+.
T Consensus       215 l~~~~~~----g~~~~i~~~~~~~~~~~~~~~~lf~~i  248 (252)
T d2q46a1         215 LLFEEAK----NKAFDLGSKPEGTSTPTKDFKALFSQV  248 (252)
T ss_dssp             TTCGGGT----TEEEEEEECCTTTSCCCCCHHHHHTTC
T ss_pred             hCCcccc----CcEEEEeeCCCCCChhHHHHHHHHHHH
Confidence            9986543    4599998653   35677777666543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=3.5e-28  Score=196.05  Aligned_cols=193  Identities=17%  Similarity=0.162  Sum_probs=138.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .|||||||||||||++|+++|+++|+. .+|....|++....       ..   +..+..|..++.+.+.  ..+|+|||
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~-~~v~~~~r~~~~~~-------~~---~~~~~~d~~~~~~~~~--~~~d~vi~   68 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTL-AKVIAPARKALAEH-------PR---LDNPVGPLAELLPQLD--GSIDTAFC   68 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTC-CEEECCBSSCCCCC-------TT---EECCBSCHHHHGGGCC--SCCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEEEeCCchhhc-------cc---ccccccchhhhhhccc--cchheeee
Confidence            489999999999999999999999963 37888888754321       11   3444545333322222  36899999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHH
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI  162 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  162 (320)
                      |+|....  ...+.....+.|+.++. +++++|++.++++++++||..+++.            +.+.|+.+|..+|+.+
T Consensus        69 ~~g~~~~--~~~~~~~~~~~~~~~~~-~~~~~a~~~~v~~~i~~Ss~~~~~~------------~~~~y~~~K~~~E~~l  133 (212)
T d2a35a1          69 CLGTTIK--EAGSEEAFRAVDFDLPL-AVGKRALEMGARHYLVVSALGADAK------------SSIFYNRVKGELEQAL  133 (212)
T ss_dssp             CCCCCHH--HHSSHHHHHHHHTHHHH-HHHHHHHHTTCCEEEEECCTTCCTT------------CSSHHHHHHHHHHHHH
T ss_pred             eeeeecc--ccccccccccchhhhhh-hcccccccccccccccccccccccc------------cccchhHHHHHHhhhc
Confidence            9986532  22345678889999986 9999999999999999999988753            3568999999999999


Q ss_pred             HHHcC-CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhc
Q 020880          163 YEKCS-NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS  234 (320)
Q Consensus       163 ~~~~~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  234 (320)
                      ++.+. +++|+||+.|||+.+...    +. .+    +  ..++.....+..++||++|+|++++.+++++..
T Consensus       134 ~~~~~~~~~I~Rp~~v~G~~~~~~----~~-~~----~--~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~~  195 (212)
T d2a35a1         134 QEQGWPQLTIARPSLLFGPREEFR----LA-EI----L--AAPIARILPGKYHGIEACDLARALWRLALEEGK  195 (212)
T ss_dssp             TTSCCSEEEEEECCSEESTTSCEE----GG-GG----T--TCCCC----CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred             cccccccceeeCCcceeCCccccc----HH-HH----H--HHHHhhccCCCCcEEEHHHHHHHHHHHHcCCCC
Confidence            98776 599999999999976311    00 01    1  111111112344579999999999999987543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.93  E-value=1.9e-25  Score=193.64  Aligned_cols=234  Identities=14%  Similarity=0.036  Sum_probs=166.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCccc-HHHHHHHhCCCCEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG-FDAVALKFGQPDVV   80 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~~~~d~V   80 (320)
                      .+|+|+|||||||||++|+++|+++|   ++|++++|+.++..........+++++++|+.|..+ +..++.   ++|.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G---~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~---~~~~~   75 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVG---HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE---GAHLA   75 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT---TCSEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCC---CeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhc---CCceE
Confidence            36899999999999999999999999   889999998776543222223578899999999765 445554   88998


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHH
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK  160 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  160 (320)
                      ++.....            ...++..+ .+++++|.+.+++++++.||......        ....+..+|..+|...|.
T Consensus        76 ~~~~~~~------------~~~~~~~~-~~~~~aa~~agv~~~v~~Ss~~~~~~--------~~~~~~~~~~~~k~~~~~  134 (350)
T d1xgka_          76 FINTTSQ------------AGDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSL--------YGPWPAVPMWAPKFTVEN  134 (350)
T ss_dssp             EECCCST------------TSCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGG--------TSSCCCCTTTHHHHHHHH
T ss_pred             Eeecccc------------cchhhhhh-hHHHHHHHHhCCCceEEEeecccccc--------CCcccchhhhhhHHHHHH
Confidence            8775432            11233344 38999999999989999998764432        122345578899999999


Q ss_pred             HHHHHcCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCC-ceEee--cCcccCceeH-HHHHHHHHHHHhhhhccc
Q 020880          161 FIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGE-KVEFF--HDECRCPVYV-RDVVKIILALTNRWLSED  236 (320)
Q Consensus       161 ~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~i~v-~D~a~~~~~~~~~~~~~~  236 (320)
                      ++++...+++++|++.+++......... +..    .....+. .+..+  ++..+.++++ +|+++++..++..+..  
T Consensus       135 ~~~~~~~~~~~vr~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~--  207 (350)
T d1xgka_         135 YVRQLGLPSTFVYAGIYNNNFTSLPYPL-FQM----ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQ--  207 (350)
T ss_dssp             HHHTSSSCEEEEEECEEGGGCBSSSCSS-CBE----EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHH--
T ss_pred             HHHhhccCceeeeeceeecccccccccc-ccc----cccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChh--
Confidence            9999999999999999987543211111 000    0011222 22222  3456778876 7999999999876321  


Q ss_pred             cccCceeEecCCCCcCHHHHHHHHHHHhCCCCCc
Q 020880          237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSL  270 (320)
Q Consensus       237 ~~~~~~~n~~~~~~~s~~e~~~~i~~~~~~~~~~  270 (320)
                      ...++.|++++ +.+|+.|+++.+.+.+|++..+
T Consensus       208 ~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~~  240 (350)
T d1xgka_         208 KWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTY  240 (350)
T ss_dssp             HHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEE
T ss_pred             hcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcceE
Confidence            12355899976 5799999999999999987654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.86  E-value=4.2e-21  Score=156.41  Aligned_cols=214  Identities=15%  Similarity=0.145  Sum_probs=156.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      ++|++|||||++-||.++++.|+++|   ++|++..|++++.+.+.+.++....++.+|++|+++++++++    .++++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEG---AKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999   899999999888888877777788889999999998877664    45789


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |++||+||.....    .+.++++..+++|+.+++ .+.+++    ++.+-.++|++||...+.+..          ...
T Consensus        82 dilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~-~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~----------~~~  150 (244)
T d1nffa_          82 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVF-LGIRAVVKPMKEAGRGSIINISSIEGLAGTV----------ACH  150 (244)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TBH
T ss_pred             eEEEECCcccCCCchhhCCHHHHhHHhhcccchhh-HHHHHHHhHHHhcCcceEEeccccccccccc----------ccc
Confidence            9999999986542    223456788999999986 555444    445455899999998764322          256


Q ss_pred             hHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...+.+.+.+.       .++..+.|+.+--+-.... .            +.....     ....+...+|+|
T Consensus       151 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~-~------------~~~~~~-----pl~R~~~p~diA  212 (244)
T d1nffa_         151 GYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV-P------------EDIFQT-----ALGRAAEPVEVS  212 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS-C------------TTCSCC-----SSSSCBCHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhh-h------------HHHHhc-----cccCCCCHHHHH
Confidence            89999999999877653       3456788887754321100 0            000001     122368899999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +++++++.....  -..+.++.+.+|.
T Consensus       213 ~~v~fL~s~~s~--~itG~~i~vDGG~  237 (244)
T d1nffa_         213 NLVVYLASDESS--YSTGAEFVVDGGT  237 (244)
T ss_dssp             HHHHHHHSGGGT--TCCSCEEEESTTG
T ss_pred             HHHHHHhChhhC--CCcCCEEEECCCe
Confidence            999999864321  1235588888774

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=5.5e-21  Score=156.11  Aligned_cols=219  Identities=18%  Similarity=0.166  Sum_probs=157.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ++|++|||||++-||.++++.|+++|   ++|++.+|++++.+.+.+..+ .+..+.+|++|++++++++++++++|++|
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G---~~V~~~~r~~~~l~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~g~iDilV   81 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATG---ARVVAVSRTQADLDSLVRECP-GIEPVCVDLGDWEATERALGSVGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHHHHhCCceEEE
Confidence            36899999999999999999999999   899999999877777766654 57789999999999999999999999999


Q ss_pred             ECCCccCcc----ccccCchhhhhccccccHHHHHhhhh-----hccCceEEEeechhhhcccCCCCcccCCCCCcchHH
Q 020880           82 NCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT-----ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYG  152 (320)
Q Consensus        82 h~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~-----~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~  152 (320)
                      |+||.....    .+.++++..+++|+.+++ .+.+++.     +.+..++|++||.+......          ....|+
T Consensus        82 nnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~-~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~----------~~~~Y~  150 (244)
T d1pr9a_          82 NNAAVALLQPFLEVTKEAFDRSFEVNLRAVI-QVSQIVARGLIARGVPGAIVNVSSQCSQRAVT----------NHSVYC  150 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT----------TBHHHH
T ss_pred             eccccccccchhhhhHHHHHHHHHHhhhhhh-HHHHHhhhHHHHhCCcceEeeccccccccccc----------chhhhh
Confidence            999986542    233456788999999885 4444432     23345899999988764322          256899


Q ss_pred             HHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHH
Q 020880          153 KSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII  225 (320)
Q Consensus       153 ~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  225 (320)
                      .+|...+.+.+.+.       .++..+.|+.|.-+-.......   ...... ..+..|+       ..+...+|+|+++
T Consensus       151 asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~---~~~~~~-~~~~~pl-------~R~~~peevA~~v  219 (244)
T d1pr9a_         151 STKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD---PHKAKT-MLNRIPL-------GKFAEVEHVVNAI  219 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCS---HHHHHH-HHTTCTT-------CSCBCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccC---hHHHHH-HHhcCCC-------CCCcCHHHHHHHH
Confidence            99999999777642       2456789988854321111111   111222 2222222       2367899999999


Q ss_pred             HHHHhhhhccccccCceeEecCC
Q 020880          226 LALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ..++.....  -..+.++.+.+|
T Consensus       220 ~fL~S~~a~--~itG~~i~vDGG  240 (244)
T d1pr9a_         220 LFLLSDRSG--MTTGSTLPVEGG  240 (244)
T ss_dssp             HHHHSGGGT--TCCSCEEEESTT
T ss_pred             HHHhCchhC--CcCCcEEEECcc
Confidence            998865321  123458888776

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=4.7e-21  Score=156.31  Aligned_cols=219  Identities=15%  Similarity=0.132  Sum_probs=157.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      ++|+++||||++-||.++++.|+++|   ++|++..|+++..+.+.+.++.+...+.+|++|+++++++++    .++++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G---~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARG---AKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCc
Confidence            57999999999999999999999999   899999999887777777666677889999999998776664    45789


Q ss_pred             CEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |++||+||......    ..++++..+++|+.+++ .+.+++    ++.+-.++|++||...+.+..          ...
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~-~~~~~~~~~m~~~~~G~II~isS~~~~~~~~----------~~~  148 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVF-RLSKAVMRAMMKKRHGRIITIGSVVGTMGNG----------GQA  148 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------TCH
T ss_pred             ceehhhhhhccccccccccccccccccceeechhh-hhHHHHHHHHHHcCCCEeeeecchhhcCCCC----------CCH
Confidence            99999999865432    23456788999999986 555554    444545999999988764322          256


Q ss_pred             hHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...+.+.+.+.       .++..+.||.+--+-.     .......... +....++       ..+...+|+|
T Consensus       149 ~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~-----~~~~~~~~~~-~~~~~pl-------~R~~~pedvA  215 (243)
T d1q7ba_         149 NYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMT-----RALSDDQRAG-ILAQVPA-------GRLGGAQEIA  215 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-----HTSCHHHHHH-HHTTCTT-------SSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhh-----hhhhhhHHHH-HHhcCCC-------CCCCCHHHHH
Confidence            89999999999877643       3456788988743211     0111111212 2222222       2357899999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +++.+++....+  -..+.++.+.+|-
T Consensus       216 ~~v~fL~S~~s~--~itGq~i~vdGG~  240 (243)
T d1q7ba_         216 NAVAFLASDEAA--YITGETLHVNGGM  240 (243)
T ss_dssp             HHHHHHHSGGGT--TCCSCEEEESTTS
T ss_pred             HHHHHHhCchhc--CCcCCeEEECCCe
Confidence            999999865332  1235588888774

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.85  E-value=4e-20  Score=151.47  Aligned_cols=219  Identities=15%  Similarity=0.137  Sum_probs=155.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      ++|++|||||++-||.+++++|+++|   ++|+..+|++++.....+.++..+.++.+|++|+++++++++    .++++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAG---ARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence            57999999999999999999999999   899999999888877777777788899999999999877764    45789


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |++||+||.....    ...++++..+++|+.+++ .+.+++    ++.+-.++|++||...+....          ...
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~-~~~~~~~p~m~~~~~G~II~isS~~~~~~~~----------~~~  149 (254)
T d1hdca_          81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVF-IGMKTVIPAMKDAGGGSIVNISSAAGLMGLA----------LTS  149 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TCH
T ss_pred             cEEEecCccccccccccccccccchhhhHHhhHHH-HHHHHHHHHHhhcCCCeecccccchhccccc----------chh
Confidence            9999999987543    223455678999999985 555544    445556999999988764322          366


Q ss_pred             hHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCc-ccCc-eeHHH
Q 020880          150 VYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDE-CRCP-VYVRD  220 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-i~v~D  220 (320)
                      .|+.+|...+.+.+.+.       .++-.+.|+.+--+             +.......... ...... ..-+ ...+|
T Consensus       150 ~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~-------------~~~~~~~~~~~-~~~~~~pl~R~g~~Ped  215 (254)
T d1hdca_         150 SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP-------------MTAETGIRQGE-GNYPNTPMGRVGNEPGE  215 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH-------------HHHHHTCCCST-TSCTTSTTSSCB-CHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc-------------cchhcCHHHHH-HHHhCCCCCCCCCCHHH
Confidence            89999999999877653       34566888877422             11111111000 000111 1112 35799


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +|.+++.++.....  -..+.++.+.+|.+
T Consensus       216 vA~~v~fL~S~~a~--~itG~~i~vDGG~t  243 (254)
T d1hdca_         216 IAGAVVKLLSDTSS--YVTGAELAVDGGWT  243 (254)
T ss_dssp             HHHHHHHHHSGGGT--TCCSCEEEESTTTT
T ss_pred             HHHHHHHHhchhhC--CCCCceEEeCCCcc
Confidence            99999999865321  12355899988753

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=5e-21  Score=156.05  Aligned_cols=220  Identities=18%  Similarity=0.140  Sum_probs=156.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ++|++|||||++-||++++++|+++|   ++|++..|++++...+.+..+ .+..+.+|++|++++++++++++++|++|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~l~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~g~iDilV   79 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASG---AKVVAVTRTNSDLVSLAKECP-GIEPVCVDLGDWDATEKALGGIGPVDLLV   79 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHHHHcCCCeEEE
Confidence            37999999999999999999999999   899999999877777666654 57789999999999999999999999999


Q ss_pred             ECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hc-cCceEEEeechhhhcccCCCCcccCCCCCcchHH
Q 020880           82 NCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----EN-KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYG  152 (320)
Q Consensus        82 h~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~-~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~  152 (320)
                      |+||.....    .+.++++..+++|+.+++ .+.+++.    +. +-.++|++||...+....          ....|+
T Consensus        80 nnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~-~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------~~~~Y~  148 (242)
T d1cyda_          80 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVF-QVSQMVARDMINRGVPGSIVNVSSMVAHVTFP----------NLITYS  148 (242)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT----------TBHHHH
T ss_pred             ECCccccchhHHHHHHHHHHHHHHHHhccch-HHHHHhchhhhhhcccCcccccchhhccccCC----------cccccc
Confidence            999986542    233456678899999986 6655443    22 334899999987654322          256899


Q ss_pred             HHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHH
Q 020880          153 KSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII  225 (320)
Q Consensus       153 ~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  225 (320)
                      .+|...+.+.+.+.       .++-.+.|+.+--+-.......   ...... +....++       .-+...+|+|+++
T Consensus       149 asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~---~~~~~~-~~~~~pl-------~R~~~peeva~~v  217 (242)
T d1cyda_         149 STKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD---PEFARK-LKERHPL-------RKFAEVEDVVNSI  217 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC---HHHHHH-HHHHSTT-------SSCBCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCC---HHHHHH-HHhcCCC-------CCCcCHHHHHHHH
Confidence            99999999887653       3456788888753311000000   011111 1111121       2367899999999


Q ss_pred             HHHHhhhhccccccCceeEecCCC
Q 020880          226 LALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ..++.....  -..+.++.+.+|.
T Consensus       218 ~fL~S~~s~--~itG~~i~vDGG~  239 (242)
T d1cyda_         218 LFLLSDRSA--STSGGGILVDAGY  239 (242)
T ss_dssp             HHHHSGGGT--TCCSSEEEESTTG
T ss_pred             HHHhCchhc--CcCCceEEeCcch
Confidence            998865321  1235588888763

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.85  E-value=3.7e-20  Score=151.41  Aligned_cols=222  Identities=16%  Similarity=0.148  Sum_probs=150.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFG   75 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~   75 (320)
                      |.+|.++||||++-||.++++.|+++|   ++|++..|++.+ .....+..+.++.++.+|++|+++++++++    .++
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~G---a~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   79 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEG---ADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFG   79 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999   899999997654 334445566778889999999998877664    457


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++|++||+||.....    .+.++++..+++|+.+++ .+.+++    ++.+-.++|++||.....+.          ..
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~-~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~----------~~  148 (247)
T d2ew8a1          80 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGF-LMAKAFVPGMKRNGWGRIINLTSTTYWLKI----------EA  148 (247)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGGSCC----------SS
T ss_pred             CCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhh-HHHHHHHhHHHhcCCCCccccccchhcccC----------cc
Confidence            899999999986542    233566788999999985 555544    45555599999998875432          12


Q ss_pred             cchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+.+.+.       .++-.+.||.+--+.....    ..............+       ..-+...+|
T Consensus       149 ~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~----~~~~~~~~~~~~~~~-------l~r~~~ped  217 (247)
T d2ew8a1         149 YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS----ALSAMFDVLPNMLQA-------IPRLQVPLD  217 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------CTTSS-------SCSCCCTHH
T ss_pred             cccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccc----ccchhHHHHHHHhcc-------CCCCCCHHH
Confidence            5689999999998777643       3556788988854422100    000000000000011       123567899


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|++++.++.....  -..+.++.+.+|-
T Consensus       218 vA~~v~fL~S~~s~--~itG~~i~vDGG~  244 (247)
T d2ew8a1         218 LTGAAAFLASDDAS--FITGQTLAVDGGM  244 (247)
T ss_dssp             HHHHHHHHTSGGGT--TCCSCEEEESSSC
T ss_pred             HHHHHHHHhCchhc--CCcCCeEEECCCE
Confidence            99999999865321  1235588888763

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.84  E-value=4.9e-20  Score=151.06  Aligned_cols=219  Identities=14%  Similarity=0.097  Sum_probs=155.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      .+|.+|||||++-||.++++.|+++|   ++|++..|+++..+...+.   .+..+.++.+|++|++++.++++    .+
T Consensus         9 enKvalITGas~GIG~a~a~~la~~G---a~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSV---SHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTS---SEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            47899999999999999999999999   8999999987766554433   34567889999999998877665    45


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|++||+|+.....    ...++++..+++|+.+++ .+.+++    ++.+-.+||++||.....+..          
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~-~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~----------  154 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLF-YITQPISKRMINNRYGRIINISSIVGLTGNV----------  154 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHH-HHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhh-hhhhhcCcccccCCCeEEEEECCHHhcCCCC----------
Confidence            7999999999986542    233456788999999985 555543    445555999999988764322          


Q ss_pred             CcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          147 PVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      ....|+.+|...+.+.+.+.       .++..+.||.+--+-..     ......... +....++.       -+...+
T Consensus       155 ~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~-----~~~~~~~~~-~~~~~pl~-------R~~~pe  221 (251)
T d2c07a1         155 GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD-----KISEQIKKN-IISNIPAG-------RMGTPE  221 (251)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------CCHHHHHH-HHTTCTTS-------SCBCHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccc-----ccCHHHHHH-HHhcCCCC-------CCcCHH
Confidence            25689999999999877642       35567999988654321     112223322 22333322       267899


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+|+++..++.....  -..+.++.+.+|-
T Consensus       222 dvA~~v~fL~S~~s~--~itG~~i~vDGG~  249 (251)
T d2c07a1         222 EVANLACFLSSDKSG--YINGRVFVIDGGL  249 (251)
T ss_dssp             HHHHHHHHHHSGGGT--TCCSCEEEESTTS
T ss_pred             HHHHHHHHHhCchhC--CCcCcEEEECCCc
Confidence            999999998865432  1235588888763

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.84  E-value=1.1e-19  Score=148.13  Aligned_cols=217  Identities=14%  Similarity=0.084  Sum_probs=153.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      .+|++|||||++-||.++++.|+++|   ++|+..+|++++.+...+.+  +..++.+|++|+++++++++    .++++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G---~~V~~~~r~~~~l~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   78 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEG---ARLVACDIEEGPLREAAEAV--GAHPVVMDVADPASVERGFAEALAHLGRL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHTT--TCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            46899999999999999999999999   89999999987776666654  46779999999999877764    45789


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |++||+||...+.    .+.++++..+++|+.+++ .+.+++    ++.+...++.+||....+.           .+..
T Consensus        79 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~-~~~~~~~~~m~~~~~~~i~~~ss~~~~~~-----------~~~~  146 (242)
T d1ulsa_          79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSF-LVAKAASEAMREKNPGSIVLTASRVYLGN-----------LGQA  146 (242)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHH-HHHHHHHHHHTTTCCEEEEEECCGGGGCC-----------TTCH
T ss_pred             eEEEECCcccccCchhhCcchhhhccccccchhhh-hhhhhccccccccccceeeeeccccccCC-----------CCCc
Confidence            9999999986542    233456788999999985 555444    4455557777777654332           2356


Q ss_pred             hHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...+.+.+.+.       .++..+.||.+--+-.     ............ ...++.       -+...+|+|
T Consensus       147 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~-----~~~~~~~~~~~~-~~~pl~-------R~~~pedia  213 (242)
T d1ulsa_         147 NYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMT-----AKVPEKVREKAI-AATPLG-------RAGKPLEVA  213 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTT-----SSSCHHHHHHHH-HTCTTC-------SCBCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhh-----hcCCHHHHHHHH-hcCCCC-------CCCCHHHHH
Confidence            89999999999777642       3556799998854432     112222222222 232322       256799999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCCCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +++..++.....  -..+.++.+.+|..
T Consensus       214 ~~v~fL~S~~s~--~itG~~i~vDGG~t  239 (242)
T d1ulsa_         214 YAALFLLSDESS--FITGQVLFVDGGRT  239 (242)
T ss_dssp             HHHHHHHSGGGT--TCCSCEEEESTTTT
T ss_pred             HHHHHHhchhhC--CCCCcEEEECCCcc
Confidence            999999865321  12355898888754

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.84  E-value=4.3e-20  Score=151.92  Aligned_cols=222  Identities=16%  Similarity=0.191  Sum_probs=157.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~d   78 (320)
                      +|++|||||++-||.++++.|+++|   ++|++.+|+.++.+...+.++.++.++.+|++|+++++++++    .++++|
T Consensus         5 gK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iD   81 (256)
T d1k2wa_           5 GKTALITGSARGIGRAFAEAYVREG---ARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSID   81 (256)
T ss_dssp             TEEEEEETCSSHHHHHHHHHHHHTT---EEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            6899999999999999999999999   999999999888887777777788889999999999877665    457899


Q ss_pred             EEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hc-cCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           79 VVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----EN-KENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        79 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~-~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      ++||+||.....    .+.++++..+++|+.+++ .+.+++.    +. ...++|++||.+.+.+.          ....
T Consensus        82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~-~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~----------~~~~  150 (256)
T d1k2wa_          82 ILVNNAALFDLAPIVEITRESYDRLFAINVSGTL-FMMQAVARAMIAGGRGGKIINMASQAGRRGE----------ALVG  150 (256)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------TTCH
T ss_pred             EEEeecccccccccccCCHHHHHhhhceeeeccc-cchhhccchhHHhccCCccccccchhhcccc----------cccc
Confidence            999999976542    233456788999999985 5555432    22 23489999998876432          2356


Q ss_pred             hHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHH----------HHHHHhcCCceEeecCcc
Q 020880          150 VYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQW----------IDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~  212 (320)
                      .|+.+|...+.+.+.+.       .++-.+.||.+-.+...     .....+          ....+....|       .
T Consensus       151 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~P-------l  218 (256)
T d1k2wa_         151 VYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWD-----GVDAKFADYENLPRGEKKRQVGAAVP-------F  218 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHH-----HHHHHHHHHHTCCTTHHHHHHHHHST-------T
T ss_pred             chhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhh-----hhhhhhhhhccCChHHHHHHHHhcCC-------C
Confidence            89999999999877643       34567888877544210     000000          0000111111       1


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      .-+...+|+|.+++.++.....  -..+.++.+.+|..+|
T Consensus       219 gR~~~p~evA~~v~fL~S~~a~--~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         219 GRMGRAEDLTGMAIFLATPEAD--YIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             SSCBCHHHHHHHHHHTTSGGGT--TCCSCEEEESTTSSCC
T ss_pred             CCCcCHHHHHHHHHHHhCchhC--CccCceEEECcchhhC
Confidence            2367899999999998754321  1235589998886543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.83  E-value=2.4e-20  Score=152.42  Aligned_cols=223  Identities=18%  Similarity=0.146  Sum_probs=150.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      ++|++|||||++-||.++++.|+++|   ++|++..|+++..+ ..+..  +..++.+|++|+++++++++    .++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G---~~V~~~~~~~~~~~-~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   77 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREG---ALVALCDLRPEGKE-VAEAI--GGAFFQVDLEDERERVRFVEEAAYALGRV   77 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTTHHH-HHHHH--TCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHH-HHHHc--CCeEEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999   89999999876543 33332  34578999999998776664    45799


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |++||+||...+.    .+.++++..+++|+.+++ ++.+++    ++.+-.++|++||...+.+.          ....
T Consensus        78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~-~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~----------~~~~  146 (248)
T d2d1ya1          78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPM-HLSALAAREMRKVGGGAIVNVASVQGLFAE----------QENA  146 (248)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHTTTCEEEEEECCGGGTSBC----------TTBH
T ss_pred             CeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHh-hhhhhhcccccccccccccccccccccccc----------cccc
Confidence            9999999986542    233456788999999986 555555    44555599999999876432          2367


Q ss_pred             hHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCC-CCCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          150 VYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISP-VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      .|+.+|...+.+.+.+.       .++..+.|+.+--+..... .......... +.+.+..+       ..-+...+|+
T Consensus       147 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~-~~~~~~~p-------l~R~~~pedi  218 (248)
T d2d1ya1         147 AYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTR-RDWEDLHA-------LRRLGKPEEV  218 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------C-HHHHTTST-------TSSCBCHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHH-HHHHhcCC-------CCCCcCHHHH
Confidence            89999999999776642       3456688887743210000 0000000000 11111111       2236789999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      |+++..++.....  -..+.++.+.+|-+-
T Consensus       219 a~~v~fL~S~~s~--~itG~~i~vDGG~ta  246 (248)
T d2d1ya1         219 AEAVLFLASEKAS--FITGAILPVDGGMTA  246 (248)
T ss_dssp             HHHHHHHHSGGGT--TCCSCEEEESTTGGG
T ss_pred             HHHHHHHhCchhc--CCCCcEEEcCcCccc
Confidence            9999999865321  223558999887543

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=4.4e-20  Score=151.61  Aligned_cols=219  Identities=17%  Similarity=0.172  Sum_probs=154.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHH----HhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVAL----KFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----~~~   75 (320)
                      +|++|||||++-||.+++++|+++|   ++|++..|++++.+...+.   .+..+.++.+|++|+++++++++    .++
T Consensus        11 gK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g   87 (255)
T d1fmca_          11 GKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999   8999999987766554433   35577889999999998877664    457


Q ss_pred             CCCEEEECCCccCcc---ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           76 QPDVVVNCAALSVPR---VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      ++|++||+||...+.   .+.++++..+++|+.+++ .+.+++    ++.+-.++|++||...+.+..          ..
T Consensus        88 ~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~-~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~----------~~  156 (255)
T d1fmca_          88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFF-HLSQLVAPEMEKNGGGVILTITSMAAENKNI----------NM  156 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTCCCT----------TC
T ss_pred             CCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhh-hhHHHHHhhhccccccccccccccchhcccc----------cc
Confidence            999999999986543   233456788999999985 555444    445555899999987764322          36


Q ss_pred             chHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          149 NVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      ..|+.+|...+.+.+.+.       .++..+.||.|--+....    ........... +..++.       -+...+|+
T Consensus       157 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~----~~~~e~~~~~~-~~~pl~-------R~g~pedv  224 (255)
T d1fmca_         157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS----VITPEIEQKML-QHTPIR-------RLGQPQDI  224 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT----TCCHHHHHHHH-HTCSSC-------SCBCHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhc----cCCHHHHHHHH-hcCCCC-------CCcCHHHH
Confidence            689999999999777643       345678898885432111    11112222222 222322       25679999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCCC
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |++++.++.....  -..+.++.+.+|.
T Consensus       225 A~~v~fL~S~~s~--~itG~~i~vDGG~  250 (255)
T d1fmca_         225 ANAALFLCSPAAS--WVSGQILTVSGGG  250 (255)
T ss_dssp             HHHHHHHHSGGGT--TCCSCEEEESTTS
T ss_pred             HHHHHHHhCchhc--CCcCCEEEECcCc
Confidence            9999999865321  1235589998874

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.83  E-value=5.4e-20  Score=150.72  Aligned_cols=223  Identities=17%  Similarity=0.160  Sum_probs=153.3

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhh----hhCCCcceEEEeeCCCcccHHHHHH----
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL----DALPHSFVFFDVDLKSGSGFDAVAL----   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~----   72 (320)
                      |++|++|||||++-||.++++.|+++|   ++|++.+|+.++.....    +..+..+.++.+|++|+++++++++    
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~G---a~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAG---CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999   89999999876654433    3335567789999999998777664    


Q ss_pred             HhCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhh----hhhccCceEEEeechhhhcccCCCCcccCC
Q 020880           73 KFGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSS----FTENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      .++++|++||+||.....    .+.++++..+++|+.+++ .+.++    +++.+-.++|++||.......         
T Consensus        80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~-~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~---------  149 (251)
T d1vl8a_          80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTY-YVCREAFSLLRESDNPSIINIGSLTVEEVT---------  149 (251)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHTTCSSCEEEEECCGGGTCCC---------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhh-hhhhhhhhcccccccccccccccchhcccc---------
Confidence            457899999999976432    233456788999999985 55444    445555699999986542211         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      ......|+.+|...+.+.+.+       +.++-.+.||.+--+-......   ......... +..++       .-+..
T Consensus       150 ~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~---~~~~~~~~~-~~~pl-------~R~~~  218 (251)
T d1vl8a_         150 MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS---DPEKLDYML-KRIPL-------GRTGV  218 (251)
T ss_dssp             SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT---CHHHHHHHH-HTCTT-------SSCBC
T ss_pred             CccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccC---CHHHHHHHH-hcCCC-------CCCCC
Confidence            112568999999999977764       3456779999885443210000   001122222 22222       13567


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .+|+|++++.++.....  -..+.++.+.+|-
T Consensus       219 pedvA~~v~fL~S~~a~--~itG~~i~vDGG~  248 (251)
T d1vl8a_         219 PEDLKGVAVFLASEEAK--YVTGQIIFVDGGW  248 (251)
T ss_dssp             GGGGHHHHHHHHSGGGT--TCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHhCchhC--CCcCcEEEeCcCe
Confidence            89999999998865322  1234588888763

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.83  E-value=6.8e-20  Score=148.70  Aligned_cols=210  Identities=20%  Similarity=0.195  Sum_probs=145.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      ++|++|||||++-||.++++.|+++|   ++|++..|+++..+        .+..+.+|++|+++++++++    .++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~G---a~V~~~~r~~~~~~--------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   74 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADG---HKVAVTHRGSGAPK--------GLFGVEVDVTDSDAVDRAFTAVEEHQGPV   74 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSSCCCT--------TSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCcchhc--------CceEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            47899999999999999999999999   89999999876543        45568999999998777664    45789


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHH----HhhhhhccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNW----LSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~----l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      |++||+||.....    .+.++++..+++|+.+++ .+    +..+++.+..++|++||.+...+..          ...
T Consensus        75 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~-~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~----------~~~  143 (237)
T d1uzma1          75 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAF-RVAQRASRSMQRNKFGRMIFIGSVSGLWGIG----------NQA  143 (237)
T ss_dssp             SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCEEEEEECCCCC---------------CCH
T ss_pred             eEEEeeecccccccHhhCCHHHHHHHHHhhhhhhh-hhhhhhhhcccccCCCceEEEcchhhccCCc----------ccH
Confidence            9999999986542    233456788999999985 44    4445556666999999987654321          356


Q ss_pred             hHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHH
Q 020880          150 VYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV  222 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  222 (320)
                      .|+.+|...+.+.+.+.       .++-.+.|+.+.-+-.     ..+... ......+..++       .-+...+|+|
T Consensus       144 ~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~-----~~~~~~-~~~~~~~~~pl-------~R~~~pedvA  210 (237)
T d1uzma1         144 NYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMT-----RALDER-IQQGALQFIPA-------KRVGTPAEVA  210 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-----HHSCHH-HHHHHGGGCTT-------CSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhh-----hccCHH-HHHHHHhcCCC-------CCCcCHHHHH
Confidence            89999999999777643       2456688988853311     000111 11112122221       2357899999


Q ss_pred             HHHHHHHhhhhccccccCceeEecCC
Q 020880          223 KIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      +++.+++.....  -..+.++.+.+|
T Consensus       211 ~~v~fL~S~~s~--~itG~~i~vdGG  234 (237)
T d1uzma1         211 GVVSFLASEDAS--YISGAVIPVDGG  234 (237)
T ss_dssp             HHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred             HHHHHHhCchhc--CCcCCeEEECCC
Confidence            999999865322  123558888876

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.83  E-value=7.2e-20  Score=151.06  Aligned_cols=225  Identities=13%  Similarity=0.123  Sum_probs=149.4

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhh----hhCCCcceEEEeeCCCcccHHHHHH---
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLL----DALPHSFVFFDVDLKSGSGFDAVAL---   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~---   72 (320)
                      |++|++|||||++-||.+++++|+++|   ++|++..|++.. .+...    +..+.++.++.+|++|+++++++++   
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~G---a~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   78 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQG---ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAV   78 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            457999999999999999999999999   899999997532 32222    2234567889999999999877665   


Q ss_pred             -HhCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHH----hhhhhccCceEEEeechhhhcccCCCCcccC
Q 020880           73 -KFGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWL----SSFTENKENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        73 -~~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l----~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                       .++++|++||+||.....    .+.++++..+++|+.+++ .+.    ..+++.+-.++|++||.+...+.        
T Consensus        79 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~-~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~--------  149 (260)
T d1x1ta1          79 RQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVF-HGTAAALPHMKKQGFGRIINIASAHGLVAS--------  149 (260)
T ss_dssp             HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------
T ss_pred             HHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccc-cccchhhhhHhhcCCceEeecccccceecc--------
Confidence             457899999999986542    233456788999999985 444    44455555599999998876432        


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCCh------HHHHHHHHhcCCceEeecC
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHD  210 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~  210 (320)
                        .....|+.+|...+.+.+.+.       .++..+.||.+--+-.........-      .......+....       
T Consensus       150 --~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  220 (260)
T d1x1ta1         150 --ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQ-------  220 (260)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHC-------
T ss_pred             --CCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcC-------
Confidence              235689999999999777642       2456799998854321100000000      000000000001       


Q ss_pred             cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ...-+...+|+|+++++++.....  -..+.++.+.+|
T Consensus       221 Pl~R~g~pediA~~v~fL~S~~a~--~itG~~i~vDGG  256 (260)
T d1x1ta1         221 PSLQFVTPEQLGGTAVFLASDAAA--QITGTTVSVDGG  256 (260)
T ss_dssp             TTCCCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred             CCCCCcCHHHHHHHHHHHhChhhC--CCcCCEEEECcc
Confidence            122367899999999999865321  223558888876

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.82  E-value=1.2e-19  Score=149.33  Aligned_cols=222  Identities=15%  Similarity=0.096  Sum_probs=151.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhh---hhhCCCcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLL---LDALPHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      ++|+++||||++-||.+++++|.++|   ++|++..|+.+. .+..   ....+..+..+.+|++|+++++++++    +
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEK---AKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999   899999998643 3322   23345567889999999998877664    4


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhh----hhhccC-ceEEEeechhhhcccCCCCcccCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSS----FTENKE-NLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~-~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      ++++|++||+||...+.    .+.++++..+++|+.+++ .+.++    +.+.+. ..||++||.+...+.         
T Consensus        83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~-~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~---------  152 (261)
T d1geea_          83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAF-LGSREAIKYFVENDIKGTVINMSSVHEKIPW---------  152 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCCCEEEEECCGGGTSCC---------
T ss_pred             hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccch-hHHHHHhhhhccccccccccccccchhcccC---------
Confidence            57899999999986542    233456788999999985 55444    444443 358899998765332         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       .....|+.+|...+.+.+.+       +.++..+.|+.|--+-..    ......-....+....++       .-+..
T Consensus       153 -~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~----~~~~~~~~~~~~~~~~pl-------~R~~~  220 (261)
T d1geea_         153 -PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA----EKFADPEQRADVESMIPM-------GYIGE  220 (261)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH----HHHHSHHHHHHHHTTCTT-------SSCBC
T ss_pred             -ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHh----hhcCCHHHHHHHHhcCCC-------CCCCC
Confidence             12568999999999987764       345677999988543210    000000111112222222       23568


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      .+|+|++++.++.....  -..+.++.+.+|..
T Consensus       221 pediA~~v~fL~S~~s~--~itG~~i~vDGG~s  251 (261)
T d1geea_         221 PEEIAAVAAWLASSEAS--YVTGITLFADGGMT  251 (261)
T ss_dssp             HHHHHHHHHHHHSGGGT--TCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhCchhc--CCcCCeEEECCCee
Confidence            99999999999865321  12355899988754

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.82  E-value=3e-20  Score=152.38  Aligned_cols=223  Identities=19%  Similarity=0.212  Sum_probs=153.5

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQ   76 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~   76 (320)
                      +++|+++||||++-||.++++.|+++|   ++|++.+|++++.+.+.+.++....++.+|++|+++++++++    .+++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G---a~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   80 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEG---AKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            357999999999999999999999999   899999999887777777777778889999999998777664    4578


Q ss_pred             CCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           77 PDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        77 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      +|++||+||...+.    .+.++++..+++|+.+++ .+.+++    ++.+ .++|++||.+.+.+.          ...
T Consensus        81 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~-~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~----------~~~  148 (253)
T d1hxha_          81 LNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVF-IGCQQGIAAMKETG-GSIINMASVSSWLPI----------EQY  148 (253)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHTTTC-EEEEEECCGGGTSCC----------TTB
T ss_pred             CCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHH-HHHHHHHHHHHhcC-CceecccchhhhcCc----------ccc
Confidence            99999999986542    233456788999999985 444443    4444 489999998875432          235


Q ss_pred             chHHHHHHHHHHHHHHHc---------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHH
Q 020880          149 NVYGKSKVAAEKFIYEKC---------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR  219 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~~---------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  219 (320)
                      ..|+.+|...+.+.+.+.         .++-.+.|+.+--+-.....+....    .....+..+..    ....+...+
T Consensus       149 ~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~----~~~~~~~~~~~----~~gr~~~pe  220 (253)
T d1hxha_         149 AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVS----KEMVLHDPKLN----RAGRAYMPE  220 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCC----HHHHBCBTTTB----TTCCEECHH
T ss_pred             ccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhh----HHHHHhCcccc----ccCCCCCHH
Confidence            689999999998776432         2445688888753210000000000    00111111100    112367789


Q ss_pred             HHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          220 DVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       220 D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      |+|++++.++.....  -..+.++++.+|
T Consensus       221 dvA~~v~fL~S~~s~--~itG~~i~VDGG  247 (253)
T d1hxha_         221 RIAQLVLFLASDESS--VMSGSELHADNS  247 (253)
T ss_dssp             HHHHHHHHHHSGGGT--TCCSCEEEESSS
T ss_pred             HHHHHHHHHhChhhC--CCcCcEEEECcc
Confidence            999999999865321  123458888776

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.82  E-value=6.9e-19  Score=145.73  Aligned_cols=229  Identities=14%  Similarity=0.168  Sum_probs=156.4

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC--CCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      +.+|++|||||++-||.++++.|+++|   ++|++.+|++++.++..+.+  ...+.++.+|++|+++++++++    .+
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~G---a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYG---AKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH   80 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999   89999999977766665544  3457788999999999877664    55


Q ss_pred             CCCCEEEECCCccCcc------ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCC
Q 020880           75 GQPDVVVNCAALSVPR------VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      +++|++||+||.....      ...++++..+++|+.+++ .+.+++    .+.+-.++|++||...+....        
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~-~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~--------  151 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAF-LVAKHAARVMIPAKKGSIVFTASISSFTAGE--------  151 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHGGGTCEEEEEECCGGGTCCCT--------
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchh-hhhhhhcchHhhcCCCCcccccccccccccc--------
Confidence            7999999999975432      122345678899999985 554444    445555899999887653221        


Q ss_pred             CCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       .....|+.+|...+.+.+.+.       .++-.+.|+.+-.+-....... .. .............      ..-+..
T Consensus       152 -~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-~~-~~~~~~~~~~~~~------~gr~~~  222 (268)
T d2bgka1         152 -GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV-DS-SRVEELAHQAANL------KGTLLR  222 (268)
T ss_dssp             -TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC-CH-HHHHHHHHHTCSS------CSCCCC
T ss_pred             -ccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcC-CH-HHHHHHHHhcccc------CCCCcC
Confidence             123479999999999877643       3556799998866543211111 11 1122211111110      112578


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                      .+|+|+++++++.....  -..+.++.+.+|-+.+
T Consensus       223 pedvA~~v~fL~S~~s~--~itGq~i~VDGG~t~~  255 (268)
T d2bgka1         223 AEDVADAVAYLAGDESK--YVSGLNLVIDGGYTRT  255 (268)
T ss_dssp             HHHHHHHHHHHHSGGGT--TCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHHhChhhC--CccCceEEECcCcccC
Confidence            99999999999865321  2235589998875443

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.82  E-value=2.2e-19  Score=147.89  Aligned_cols=222  Identities=15%  Similarity=0.116  Sum_probs=152.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHH----HhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVAL----KFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----~~~   75 (320)
                      +|.+|||||++-||.++++.|+++|   ++|++..|+++..+...+.   .+..+.++.+|++|+++++++++    .++
T Consensus         2 gKValITGas~GIG~aia~~la~~G---a~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEG---LRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            6888999999999999999999999   8999999987666554433   34567889999999999877664    457


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhh------ccCceEEEeechhhhcccCCCCcccCCC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTE------NKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~------~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++|++||+||.....    .+.++++..+++|+.+++ .+.+++..      .+..++|++||...+.+..         
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~-~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~---------  148 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVF-RVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV---------  148 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCT---------
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhh-HHHHHHhHHHHHHhcCCcccccccccccccccc---------
Confidence            899999999986542    233456788999999996 77666532      3445899999987764322         


Q ss_pred             CCcchHHHHHHHHHHHHHHHcC-------CeeEEeecccccCCCCC------CCCCCChHHHHHHHHhcCCceEeecCcc
Q 020880          146 APVNVYGKSKVAAEKFIYEKCS-------NFAILRSSIIYGPQTIS------PVPKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~~-------~~~ilR~~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                       ....|+.+|...+.+.+.+..       ++..+.||.|--+-...      ..........+.. +....|+       
T Consensus       149 -~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~Pl-------  219 (257)
T d2rhca1         149 -HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDR-ITARVPI-------  219 (257)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHH-HHTTSTT-------
T ss_pred             -cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHH-HHhcCCC-------
Confidence             256899999999998876532       34568888773221000      0000001111111 1122222       


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      .-+...+|+|++++.++....+  -..+.++.+.+|
T Consensus       220 gR~~~pedia~~v~fL~S~~s~--~itG~~i~vDGG  253 (257)
T d2rhca1         220 GRYVQPSEVAEMVAYLIGPGAA--AVTAQALNVCGG  253 (257)
T ss_dssp             SSCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCchhc--CCcCceEEECcC
Confidence            2367899999999999864321  223558888876

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.82  E-value=5.5e-20  Score=151.36  Aligned_cols=222  Identities=14%  Similarity=0.070  Sum_probs=141.3

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHH----
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      |++|++|||||++-||.++++.|+++|   ++|++..|++++.++..+.+   ...+..+.+|++|+++++++++.    
T Consensus         6 LkgK~alVTGas~GIG~aiA~~la~~G---a~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           6 LKAKTVLVTGGTKGIGHAIVEEFAGFG---AVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999   89999999977665544432   45678899999999988776643    


Q ss_pred             h-CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCC
Q 020880           74 F-GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 ~-~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      + +.+|++||+||...+.    .+.++++..+++|+.+++ .+.+++    ++.+-.++|++||.......         
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~-~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~---------  152 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAY-HLSQLAHPLLKASGCGNIIFMSSIAGVVSA---------  152 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHSSCEEEEEC-----------------
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhhe-eeehhhhhcccccccccccccccccccccc---------
Confidence            4 4699999999986542    233456788999999986 555544    44555599999998765332         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                       .....|+.+|...+.+.+.+       +.++-.+.||.+--+-....     ........+....++       .-+..
T Consensus       153 -~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~-----~~~~~~~~~~~~~pl-------~R~~~  219 (259)
T d1xq1a_         153 -SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV-----YDDEFKKVVISRKPL-------GRFGE  219 (259)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------------------CC
T ss_pred             -cccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhh-----chHHHHHHHHhCCCC-------CCCcC
Confidence             12568999999999977764       23566788888754322110     000111111111122       12567


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      .+|+|.+++.++.....  -..+.++.+.+|..
T Consensus       220 pedvA~~v~fL~S~~s~--~iTG~~i~vDGG~s  250 (259)
T d1xq1a_         220 PEEVSSLVAFLCMPAAS--YITGQTICVDGGLT  250 (259)
T ss_dssp             GGGGHHHHHHHTSGGGT--TCCSCEEECCCCEE
T ss_pred             HHHHHHHHHHHhCchhc--CCcCcEEEeCCCEE
Confidence            89999999998854321  12345888877743

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.82  E-value=2e-19  Score=147.93  Aligned_cols=225  Identities=17%  Similarity=0.163  Sum_probs=152.4

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHH----H
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      +.+|++|||||++-||.+++++|+++|   ++|+..+|++++.+...+   ..+..+.++.+|+++.++++++++    .
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G---~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGLG---ARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            357999999999999999999999999   899999999765544333   335667788999999998876654    4


Q ss_pred             h-CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCC
Q 020880           74 F-GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 ~-~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      + +.+|+++|+||.....    .+.+++...+++|+.+++ .+.+++    .+.+..++|++||.+...+..        
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~-~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~--------  151 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY-HLSQIAYPLLKASQNGNVIFLSSIAGFSALP--------  151 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTSEEEEEECCGGGTSCCT--------
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccc-ccccccccccccccccccccccccccccccc--------
Confidence            4 3589999999986542    234456788999999985 555544    445556999999998764332        


Q ss_pred             CCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCC-CCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          145 IAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVP-KSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                        ....|+.+|...+.+.+.+.       .++-.+.|+.+.-+....... .......+.... ...++       .-+.
T Consensus       152 --~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~-~~~pl-------gR~~  221 (258)
T d1ae1a_         152 --SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFI-VKTPM-------GRAG  221 (258)
T ss_dssp             --TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHH-HHSTT-------CSCB
T ss_pred             --cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHH-hcCCC-------CCCc
Confidence              26689999999999877652       245679999986543211100 000111222222 11122       2368


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ..+|+|.+++.++.....  -..+..+.+.+|-
T Consensus       222 ~pediA~~v~fL~S~~s~--~itG~~i~vDGG~  252 (258)
T d1ae1a_         222 KPQEVSALIAFLCFPAAS--YITGQIIWADGGF  252 (258)
T ss_dssp             CHHHHHHHHHHHHSGGGT--TCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhChhhC--CCcCcEEEeCCCe
Confidence            899999999999854321  1234488887763

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.82  E-value=1e-19  Score=149.86  Aligned_cols=224  Identities=15%  Similarity=0.105  Sum_probs=152.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      ++|++|||||++-||.++++.|+++|   ++|++..|++++.+...+.+   +..+.++.+|++|+++++++++    .+
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLG---ASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            47899999999999999999999999   89999999877665544433   4567789999999998877664    34


Q ss_pred             C-CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 G-QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~-~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      + .+|++||+||.....    .+.++++..+++|+.+++ .+.+++    ++.+-.++|++||........         
T Consensus        84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~-~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~---------  153 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY-HLSVLAHPFLKASERGNVVFISSVSGALAVP---------  153 (259)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTSSEEEEEECCGGGTSCCT---------
T ss_pred             CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeE-EEEeeccchhhhhcccccccccccccccccc---------
Confidence            4 689999999986542    223456788999999986 555544    444555999999987654322         


Q ss_pred             CCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                       ....|+.+|...+.+.+.+.       .++-.+.|+.|--+-.............+.... ...++       .-+...
T Consensus       154 -~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-~~~pl-------~R~g~p  224 (259)
T d2ae2a_         154 -YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLI-DRCAL-------RRMGEP  224 (259)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHH-HTSTT-------CSCBCH
T ss_pred             -cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHH-hcCCC-------CCCcCH
Confidence             35689999999999887653       245668898874321100000000011122211 22222       235779


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|+|++++.++.....  --.+.++.+.+|-
T Consensus       225 edvA~~v~fL~S~~s~--~itG~~i~VDGG~  253 (259)
T d2ae2a_         225 KELAAMVAFLCFPAAS--YVTGQIIYVDGGL  253 (259)
T ss_dssp             HHHHHHHHHHHSGGGT--TCCSCEEEESTTG
T ss_pred             HHHHHHHHHHhCchhC--CCcCcEEEECCCe
Confidence            9999999998865321  1234588887763

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.82  E-value=4.7e-19  Score=145.63  Aligned_cols=216  Identities=18%  Similarity=0.113  Sum_probs=149.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHH----HhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVAL----KFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~----~~~   75 (320)
                      +|.+|||||++-||.+++++|+++|   ++|++..|++++.+...+   ..+.++.++.+|++|+++++++++    .++
T Consensus         1 KKValITGas~GIG~aia~~la~~G---a~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDG---FAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLG   77 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            3556999999999999999999999   899999999776655443   334577889999999998877664    457


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhcc-CceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENK-ENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~-~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|++||+||.....    .+.++++..+++|+.+++ .+.+++    .+.+ ..++|++||...+.+..          
T Consensus        78 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~-~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~----------  146 (255)
T d1gega_          78 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVI-WGIQAAVEAFKKEGHGGKIINACSQAGHVGNP----------  146 (255)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------
T ss_pred             CccEEEecccccccCcHHHhhhhhhhhhhhhcccchh-hhhhhhcchhhhhccccccccccchhhcccCc----------
Confidence            899999999986542    223455788899999986 665554    3333 34799999987654322          


Q ss_pred             CcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHH--------------HHHhcCCce
Q 020880          147 PVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWID--------------SVLSKGEKV  205 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~--------------~~~~~~~~~  205 (320)
                      ....|+.+|...+.+.+.+.       .++..+.||.+--+-         ...+..              ..+.+..+ 
T Consensus       147 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  216 (255)
T d1gega_         147 ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM---------WAEIDRQVSEAAGKPLGYGTAEFAKRIT-  216 (255)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH---------HHHHHHHHHHHHTCCTTHHHHHHHTTCT-
T ss_pred             ccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH---------HhhhhhhhHhhhcccchhHHHHHHhcCC-
Confidence            36689999999999877643       345678888773221         001110              01111111 


Q ss_pred             EeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          206 EFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       206 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                            ..-+...+|+|++++.++....+  -..+.++.+.+|-.
T Consensus       217 ------l~R~~~peevA~~v~fL~S~~a~--~itG~~i~vDGG~~  253 (255)
T d1gega_         217 ------LGRLSEPEDVAACVSYLASPDSD--YMTGQSLLIDGGMV  253 (255)
T ss_dssp             ------TCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESSSSS
T ss_pred             ------CCCCcCHHHHHHHHHHHhCchhC--CccCcEEEecCCEE
Confidence                  12367899999999999865322  12355888888743

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.82  E-value=5.2e-19  Score=145.35  Aligned_cols=225  Identities=14%  Similarity=0.147  Sum_probs=153.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVAL----   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~----   72 (320)
                      .+|++|||||++-||.++++.|+++|   ++|++..|++++.+......     +..+..+.+|++|+++++++++    
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   79 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEG---AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   79 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence            57999999999999999999999999   89999999876654433321     3467788999999999877664    


Q ss_pred             HhCCCCEEEECCCccCcc-----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccC
Q 020880           73 KFGQPDVVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                      .++++|++||+||...+.     .+.++++..+++|+.+++ .+.+++    ++.+-.++|++||.+.+-+.        
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~-~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~--------  150 (258)
T d1iy8a_          80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF-LGLEKVLKIMREQGSGMVVNTASVGGIRGI--------  150 (258)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEECCGGGTSBC--------
T ss_pred             HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchh-hhhhhhHhhhhhhcCCCCcccccHhhccCC--------
Confidence            457899999999975331     233456788999999986 655554    34445589999998875432        


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCC---CCCCChHHHHHHHHhcCCceEeecCccc
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISP---VPKSLPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                        .....|+.+|...+.+.+.+       +.++..+.||.+.-+-....   ............ +....++       .
T Consensus       151 --~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~pl-------~  220 (258)
T d1iy8a_         151 --GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEE-FIQVNPS-------K  220 (258)
T ss_dssp             --SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHH-HHTTCTT-------C
T ss_pred             --CCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHH-HHhcCCC-------C
Confidence              23678999999999877654       34566789988853210000   000001111111 1112222       2


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      -+...+|+|++++.++.....  -..+.++.+.+|.+
T Consensus       221 R~~~p~dvA~~v~fL~S~~s~--~itG~~i~VDGG~s  255 (258)
T d1iy8a_         221 RYGEAPEIAAVVAFLLSDDAS--YVNATVVPIDGGQS  255 (258)
T ss_dssp             SCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTTTT
T ss_pred             CCcCHHHHHHHHHHHhCchhc--CCcCceEEcCcchh
Confidence            357899999999999865321  22355899988764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.82  E-value=3.6e-19  Score=146.64  Aligned_cols=223  Identities=15%  Similarity=0.095  Sum_probs=151.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      .+|++|||||++-||.++++.|+++|   ++|++.+|+++..+...+.   .+.++..+.+|++|+++++++++    .+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEG---TAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999   8999999987665554433   34567889999999998777664    45


Q ss_pred             CCCCEEEECCCccCc-----cccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVP-----RVCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +++|++||+||....     +.+.++++..+++|+.+++ .+.+++    .+.+-.++|++||...+.+..         
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~-~~~~~~~~~m~~~~~G~II~isS~~~~~~~~---------  150 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAF-HVLKAVSRQMITQNYGRIVNTASMAGVKGPP---------  150 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCHHHHSCCT---------
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccc-cchhhHHhhhhhhcCCCCCeeechhhccCCc---------
Confidence            799999999997532     1233456788899999985 555544    344455999999988764322         


Q ss_pred             CCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCC-----------CCCCCCChHHHHHHHHhcCCceEe
Q 020880          146 APVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTI-----------SPVPKSLPIQWIDSVLSKGEKVEF  207 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  207 (320)
                       ....|+.+|...+.+.+.+.       .++..+.|+.|--+-..           .............. +....|+  
T Consensus       151 -~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Pl--  226 (260)
T d1zema1         151 -NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQ-MIGSVPM--  226 (260)
T ss_dssp             -TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHH-HHHTSTT--
T ss_pred             -chHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHH-HHhcCCC--
Confidence             25689999999999877643       34567889887533100           00001111111211 2122222  


Q ss_pred             ecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          208 FHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       208 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                           .-+...+|+|++++.++.....  -..+.++.+.+|
T Consensus       227 -----~R~g~pedvA~~v~fL~S~~s~--~itG~~i~VDGG  260 (260)
T d1zema1         227 -----RRYGDINEIPGVVAFLLGDDSS--FMTGVNLPIAGG  260 (260)
T ss_dssp             -----SSCBCGGGSHHHHHHHHSGGGT--TCCSCEEEESCC
T ss_pred             -----CCCcCHHHHHHHHHHHhCchhc--CccCCeEEeCCC
Confidence                 2256789999999999865321  123447777664

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.81  E-value=1.6e-19  Score=147.95  Aligned_cols=219  Identities=16%  Similarity=0.124  Sum_probs=150.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC--CCcceEEEeeCCCcccHHHHHH----HhC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL--PHSFVFFDVDLKSGSGFDAVAL----KFG   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~----~~~   75 (320)
                      ++|++|||||++-||.++++.|+++|   ++|++..|+++..+...+.+  +..+.++.+|++|+++++++++    .++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEG---AKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            47999999999999999999999999   89999999877666555443  3567889999999998776664    457


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccC-ceEEEeechhhhcccCCCCcccCCCC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKE-NLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~-~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      ++|++||+||.....    .+.++++..+++|+.+++ .+.+++    ++.+. .++|++||...+-+..          
T Consensus        82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~-~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~----------  150 (251)
T d1zk4a1          82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVF-FGTRLGIQRMKNKGLGASIINMSSIEGFVGDP----------  150 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT----------
T ss_pred             CceEEEeccccccccchhcccccchhhhccccccccc-hhHHHHHHHHHhcCCCCceEeeeccceeccCC----------
Confidence            899999999986542    233455678999999986 555544    44544 3899999987653321          


Q ss_pred             CcchHHHHHHHHHHHHHHHc---------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          147 PVNVYGKSKVAAEKFIYEKC---------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~---------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                      ....|+.+|...+.+.+.+.         .++..+.||.+--+-...    ........ ......+       ..-+..
T Consensus       151 ~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~----~~~~~~~~-~~~~~~p-------l~R~~~  218 (251)
T d1zk4a1         151 SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD----LPGAEEAM-SQRTKTP-------MGHIGE  218 (251)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT----STTHHHHH-TSTTTCT-------TSSCBC
T ss_pred             CchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHh----cCCHHHHH-HHHhCCC-------CCCCcC
Confidence            25689999999988665432         345568898885332100    00001111 0111111       123678


Q ss_pred             HHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       218 v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      .+|+|+++++++.....  -..+.++.+.+|
T Consensus       219 pedvA~~v~fL~S~~s~--~itG~~i~vDGG  247 (251)
T d1zk4a1         219 PNDIAYICVYLASNESK--FATGSEFVVDGG  247 (251)
T ss_dssp             HHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCchhC--CCcCcEEEECcc
Confidence            99999999998865321  123558888876

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.4e-19  Score=147.86  Aligned_cols=223  Identities=17%  Similarity=0.144  Sum_probs=154.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      ++|++|||||++-||.++++.|+++|   ++|++.+|+++..+.+.+..+ +..++.+|++|+++++++++    .++++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~~~~~~~~~~~-~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSG---ARVVICDKDESGGRALEQELP-GAVFILCDVTQEDDVKTLVSETIRRFGRL   80 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCT-TEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHhcC-CCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999   899999999877777766654 56789999999999877664    45789


Q ss_pred             CEEEECCCccCcc-----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           78 DVVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        78 d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                      |++||+||.....     .+.++++..+++|+.+++ .+.+++    ++.+ .++|++||.......          ...
T Consensus        81 DilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~-~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~----------~~~  148 (250)
T d1ydea1          81 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTY-TLTKLALPYLRKSQ-GNVINISSLVGAIGQ----------AQA  148 (250)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHT-CEEEEECCHHHHHCC----------TTC
T ss_pred             CEEEecccccccccccccccHHHHHHHHHHhhhhHH-HHHHHhhHHHHhCC-CCCcccccccccccc----------cCc
Confidence            9999999965321     223446788999999986 555544    3333 499999998875432          235


Q ss_pred             chHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCC-CCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          149 NVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISP-VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ..|+.+|...+.+.+.+       +.++..+.||.|--+-.... .........+..... ..|+       .-+...+|
T Consensus       149 ~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~pl-------~R~g~p~e  220 (250)
T d1ydea1         149 VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGML-AQPL-------GRMGQPAE  220 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHH-TSTT-------SSCBCHHH
T ss_pred             chhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHh-cCCC-------CCCCCHHH
Confidence            68999999999977764       34567799988842210000 000001112222221 1222       23678999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      +|++++.++.. .  .-..+.++.+.+|..+
T Consensus       221 va~~v~fL~Sd-a--~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         221 VGAAAVFLASE-A--NFCTGIELLVTGGAEL  248 (250)
T ss_dssp             HHHHHHHHHHH-C--TTCCSCEEEESTTTTS
T ss_pred             HHHHHHHHhCc-c--CCCcCCeEEECCCccc
Confidence            99999988753 2  1234558989887543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.81  E-value=3e-19  Score=148.46  Aligned_cols=223  Identities=17%  Similarity=0.113  Sum_probs=148.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHH----HHhCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVA----LKFGQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----~~~~~~d   78 (320)
                      +|++|||||++-||+++++.|+++|   ++|++..|++++..++...++.++..+.+|+++++++++++    +.++++|
T Consensus         5 gK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id   81 (276)
T d1bdba_           5 GEAVLITGGASGLGRALVDRFVAEG---AKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKID   81 (276)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcc
Confidence            6899999999999999999999999   89999999987777776666677888999999999877665    4567999


Q ss_pred             EEEECCCccCcccc-----c----cCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           79 VVVNCAALSVPRVC-----E----NDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        79 ~Vih~a~~~~~~~~-----~----~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++||+||.......     .    .+++..+++|+.+++ .+.+++    ++.+ .++|++||...+-+.          
T Consensus        82 ilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~-~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~----------  149 (276)
T d1bdba_          82 TLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYI-HAVKACLPALVASR-GNVIFTISNAGFYPN----------  149 (276)
T ss_dssp             EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHT-CEEEEECCGGGTSTT----------
T ss_pred             cccccccccCCCCccccccccchhhhhhHHHHHhhHHHH-HHHHHHHHHHHhcC-CCceeeeechhccCC----------
Confidence            99999997543211     1    125677899999985 555444    3443 488888887654322          


Q ss_pred             CCcchHHHHHHHHHHHHHHH----cC--CeeEEeecccccCCCCC----CCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          146 APVNVYGKSKVAAEKFIYEK----CS--NFAILRSSIIYGPQTIS----PVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~----~~--~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                      .....|+.+|...+.+.+.+    +.  ++-.+.|+.|--+-...    ..........+...+....|+.       -+
T Consensus       150 ~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg-------R~  222 (276)
T d1bdba_         150 GGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIG-------RM  222 (276)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTS-------SC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCC-------CC
Confidence            12568999999999977654    33  34568888874321100    0000000011122222222221       25


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      ...+|+|.+++.++..+.+ .-..+.++++.+|
T Consensus       223 g~peeva~~v~fL~S~~~a-~~itG~~i~VDGG  254 (276)
T d1bdba_         223 PEVEEYTGAYVFFATRGDA-APATGALLNYDGG  254 (276)
T ss_dssp             CCGGGGSHHHHHHHCHHHH-TTCSSCEEEESSS
T ss_pred             cCHHHHHHHHHHHcCCccc-CCeeCcEEEECcC
Confidence            6789999999887753211 1123458999887

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.1e-19  Score=149.22  Aligned_cols=220  Identities=16%  Similarity=0.132  Sum_probs=150.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHH----
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVAL----   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~----   72 (320)
                      ++|++|||||++-||.++++.|+++|   ++|++..|+.++.+.....+     +.++.++.+|++|+++++++++    
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~G---a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKG---AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD   78 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            57999999999999999999999999   89999999977655444332     2457788999999998877664    


Q ss_pred             HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHh----hhhhcc---CceEEEeechhhhcccCCCCcccCCC
Q 020880           73 KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLS----SFTENK---ENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~----~~~~~~---~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      .++++|++||+||....    .+++..+++|+.+++ .+..    .+.+.+   ..+||++||.+.+-+.          
T Consensus        79 ~~G~iDilVnnAg~~~~----~~~~~~~~~n~~~~~-~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~----------  143 (254)
T d2gdza1          79 HFGRLDILVNNAGVNNE----KNWEKTLQINLVSVI-SGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV----------  143 (254)
T ss_dssp             HHSCCCEEEECCCCCCS----SSHHHHHHHHTHHHH-HHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC----------
T ss_pred             HcCCcCeeccccccccc----ccchheeeeehhhHH-HHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC----------
Confidence            45789999999998643    367888999998875 4433    333332   1379999999875432          


Q ss_pred             CCcchHHHHHHHHHHHHHH------Hc---CCeeEEeecccccCCCCCCCC------CCChHHHHHHHHhcCCceEeecC
Q 020880          146 APVNVYGKSKVAAEKFIYE------KC---SNFAILRSSIIYGPQTISPVP------KSLPIQWIDSVLSKGEKVEFFHD  210 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~------~~---~~~~ilR~~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~  210 (320)
                      .....|+.+|...+.+.+.      ++   .++..+.||.|--+-......      ..-....+...+    +      
T Consensus       144 ~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~----p------  213 (254)
T d2gdza1         144 AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMI----K------  213 (254)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHH----H------
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcC----C------
Confidence            2256899999999987653      22   245678898873211000000      000000010000    1      


Q ss_pred             cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcCHH
Q 020880          211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV  254 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~  254 (320)
                       ...+...+|+|++++.++....-    .+.++.+.+|..+.++
T Consensus       214 -~~r~~~pedvA~~v~fL~s~~~i----tG~~i~VdGG~~~~~~  252 (254)
T d2gdza1         214 -YYGILDPPLIANGLITLIEDDAL----NGAIMKITTSKGIHFQ  252 (254)
T ss_dssp             -HHCCBCHHHHHHHHHHHHHCTTC----SSCEEEEETTTEEEEC
T ss_pred             -CCCCcCHHHHHHHHHHHHcCCCC----CCCEEEECCCCeeecc
Confidence             11356789999999999986543    3559999988766544

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.80  E-value=4e-19  Score=144.63  Aligned_cols=219  Identities=16%  Similarity=0.133  Sum_probs=154.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH----hCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK----FGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   77 (320)
                      .+|++|||||++-||..+++.|+++|   ++|++.+|+.++.....+.++..+.++++|++++++++++++.    ++++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i   80 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREG---ASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRL   80 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            47899999999999999999999999   8999999998888888888888888899999999998777654    4789


Q ss_pred             CEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCCcchH
Q 020880           78 DVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVY  151 (320)
Q Consensus        78 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y  151 (320)
                      |++||+|+.....    .+..++...+++|+.+.+ .+.+++...  +-+.++.+||.+....           .....|
T Consensus        81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~k~~~~~~~~~~~i~~~ss~a~~~~-----------~~~~~Y  148 (241)
T d2a4ka1          81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSF-LVARKAGEVLEEGGSLVLTGSVAGLGA-----------FGLAHY  148 (241)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHH-HHHHHHHHHCCTTCEEEEECCCTTCCH-----------HHHHHH
T ss_pred             cEeccccccccccchhhhhcccccccccccccccc-ccccccccccccccceeeccccccccc-----------cCcccc
Confidence            9999999876432    223445678899998885 666665432  1224555555443221           125579


Q ss_pred             HHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHH
Q 020880          152 GKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI  224 (320)
Q Consensus       152 ~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  224 (320)
                      +.+|...|.+.+.+.       .++-++.||.+--+..     ............ +..++.       -+...+|+|++
T Consensus       149 ~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~-----~~~~~~~~~~~~-~~~p~~-------r~~~p~dva~~  215 (241)
T d2a4ka1         149 AAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT-----AGLPPWAWEQEV-GASPLG-------RAGRPEEVAQA  215 (241)
T ss_dssp             HHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGG-----TTSCHHHHHHHH-HTSTTC-------SCBCHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHH-----HhhhHhHHHHHH-hCCCCC-------CCcCHHHHHHH
Confidence            999999999877642       3556789998843321     112222333322 223332       25689999999


Q ss_pred             HHHHHhhhhccccccCceeEecCCCC
Q 020880          225 ILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +..++.....  --.+.++.+.+|.+
T Consensus       216 v~fL~S~~s~--~itG~~i~vDGG~s  239 (241)
T d2a4ka1         216 ALFLLSEESA--YITGQALYVDGGRS  239 (241)
T ss_dssp             HHHHHSGGGT--TCCSCEEEESTTTT
T ss_pred             HHHHhcchhC--CCcCceEEeCCCcc
Confidence            9999865321  12345888888754

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.80  E-value=7e-19  Score=143.37  Aligned_cols=218  Identities=15%  Similarity=0.128  Sum_probs=148.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC-CCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHH----HhC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVAL----KFG   75 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r-~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~----~~~   75 (320)
                      +.||||||++-||.+++++|+++|   ++|+..++ +++..+.+.+   ..+.++.++.+|++|+++++++++    .++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~G---a~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAG---CKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999   88887654 4433433332   335677889999999998877664    457


Q ss_pred             CCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCC
Q 020880           76 QPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAP  147 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p  147 (320)
                      ++|++||+||.....    .+.++++..+++|+.+++ .+.+++    ++.+-.++|++||.+.+-+..          .
T Consensus        79 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~-~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~----------~  147 (244)
T d1edoa_          79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVF-LCTQAATKIMMKKRKGRIINIASVVGLIGNI----------G  147 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------T
T ss_pred             CCCccccccccccccchhccchHHHHHHHhhhhhhHH-HHHHHHHHHHHHcCCcEEEEEcChhhcCCCC----------C
Confidence            899999999986542    233456788999999985 554444    445555999999988754322          2


Q ss_pred             cchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          148 VNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       148 ~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      ...|+.+|...+.+.+.+.       .++..+.||.+--+-.     ......... .+....++       .-+...+|
T Consensus       148 ~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~-----~~~~~~~~~-~~~~~~pl-------~R~~~p~d  214 (244)
T d1edoa_         148 QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT-----AKLGEDMEK-KILGTIPL-------GRTGQPEN  214 (244)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHH-----HTTCHHHHH-HHHTSCTT-------CSCBCHHH
T ss_pred             CHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHH-----HHhhHHHHH-HHHhcCCC-------CCCcCHHH
Confidence            5689999999999777643       3556788887743211     111112222 22222232       23578999


Q ss_pred             HHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          221 VVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       221 ~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|+++..++..+.+. -..+.++.+.+|-
T Consensus       215 vA~~v~fLa~S~~a~-~itG~~i~vdGG~  242 (244)
T d1edoa_         215 VAGLVEFLALSPAAS-YITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHHHHHHHCSGGG-GCCSCEEEESTTT
T ss_pred             HHHHHHHHHCCchhc-CCcCCeEEeCCCe
Confidence            999999886443221 1234588888763

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.79  E-value=9.4e-19  Score=141.90  Aligned_cols=213  Identities=13%  Similarity=0.119  Sum_probs=147.6

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |++|++|||||++-||+++++.|+++|   ++|++.+|+++..+..      ..+++.+|+++  .++.++++++++|++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~G---a~V~~~~r~~~~l~~~------~~~~~~~Dv~~--~~~~~~~~~g~iD~l   70 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEG---AEVTICARNEELLKRS------GHRYVVCDLRK--DLDLLFEKVKEVDIL   70 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHT------CSEEEECCTTT--CHHHHHHHSCCCSEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHhc------CCcEEEcchHH--HHHHHHHHhCCCcEE
Confidence            568999999999999999999999999   8999999986443321      34568899987  477888888999999


Q ss_pred             EECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcchHH
Q 020880           81 VNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYG  152 (320)
Q Consensus        81 ih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~  152 (320)
                      ||+||.....    .+.++++..+++|+.+++ .+.+++    ++.+..++|++||.......          .....|+
T Consensus        71 VnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~----------~~~~~Y~  139 (234)
T d1o5ia_          71 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMI-KIVRNYLPAMKEKGWGRIVAITSFSVISPI----------ENLYTSN  139 (234)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TTBHHHH
T ss_pred             EecccccCCcchhhhhhHHHHHHhhhhhhhhh-hhhhcccccccccccccccccccccccccc----------cccccch
Confidence            9999976442    223445677889999875 554444    44555589999998765432          2366899


Q ss_pred             HHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHH
Q 020880          153 KSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII  225 (320)
Q Consensus       153 ~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  225 (320)
                      .+|...+.+.+.+.       .++-.+.||.+--+...    .... ......+.+..++       ..+...+|+|+++
T Consensus       140 asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~----~~~~-~~~~~~~~~~~pl-------~R~~~pediA~~v  207 (234)
T d1o5ia_         140 SARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK----ELLS-EEKKKQVESQIPM-------RRMAKPEEIASVV  207 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH----HHSC-HHHHHHHHTTSTT-------SSCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhh----hhcC-HHHHHHHHhcCCC-------CCCcCHHHHHHHH
Confidence            99999998776542       34566889887544211    0000 1111222223332       2367899999999


Q ss_pred             HHHHhhhhccccccCceeEecCCC
Q 020880          226 LALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +.++.....  -..+.++.+.+|-
T Consensus       208 ~fL~S~~s~--~itG~~i~vDGG~  229 (234)
T d1o5ia_         208 AFLCSEKAS--YLTGQTIVVDGGL  229 (234)
T ss_dssp             HHHHSGGGT--TCCSCEEEESTTC
T ss_pred             HHHhChhhc--CCcCcEEEECccc
Confidence            998865322  1235589888774

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.78  E-value=1.3e-18  Score=144.34  Aligned_cols=229  Identities=14%  Similarity=0.100  Sum_probs=149.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC------CCcceEEEeeCCCcccHHHHHH---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL------PHSFVFFDVDLKSGSGFDAVAL---   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~---   72 (320)
                      ++|+++||||++-||.++++.|+++|   ++|++.+|++++.+...+.+      ..++..+.+|++|+++++++++   
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEG---AQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL   79 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHH
Confidence            57999999999999999999999999   89999999876655444322      1356789999999998776664   


Q ss_pred             -HhCCCCEEEECCCccCcc---c---cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcc
Q 020880           73 -KFGQPDVVVNCAALSVPR---V---CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        73 -~~~~~d~Vih~a~~~~~~---~---~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                       .++++|++||+||.....   .   +.++++..+++|+.+++ .+.+++    ++.+-.+++++||.+.....      
T Consensus        80 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~-~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~------  152 (274)
T d1xhla_          80 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI-EMTQKTKEHLIKTKGEIVNVSSIVAGPQAH------  152 (274)
T ss_dssp             HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCEEEEECCGGGSSSCC------
T ss_pred             HHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccc-cccccccccccccccccccchhhhhccccC------
Confidence             457899999999965332   1   22346778899999985 555554    34444578888887654322      


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhc-CCceEeecCccc
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSK-GEKVEFFHDECR  213 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  213 (320)
                          .....|+.+|...+.+.+.+       +.++..+.||.|--+-.............+...+.. ...++     ..
T Consensus       153 ----~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iP-----lg  223 (274)
T d1xhla_         153 ----SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP-----VG  223 (274)
T ss_dssp             ----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT-----TS
T ss_pred             ----CCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCC-----CC
Confidence                12568999999999977754       345677999988543110000000000111111111 11111     12


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      -+...+|+|++++.++..+.+ .-..+.++.+.+|..
T Consensus       224 R~g~pediA~~v~fL~S~d~s-~~itG~~i~vDGG~~  259 (274)
T d1xhla_         224 HCGKPEEIANIIVFLADRNLS-SYIIGQSIVADGGST  259 (274)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHH-TTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHcCCccc-cCccCcEEEeCcCHH
Confidence            356899999999998853211 112345899988753

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.78  E-value=3e-18  Score=140.45  Aligned_cols=214  Identities=12%  Similarity=0.104  Sum_probs=144.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh---hC-CCcceEEEeeCC-CcccHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD---AL-PHSFVFFDVDLK-SGSGFDAVA----L   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~---~~-~~~~~~~~~Dl~-d~~~~~~~~----~   72 (320)
                      ++|+||||||++-||..++++|+++|   .+|++..|+.+......+   .. ..++.++.+|++ +.+++.+++    +
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G---~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRN---LKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTC---CSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            47999999999999999999999999   888888888766543322   22 346778899998 444555444    4


Q ss_pred             HhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhh----hc---cCceEEEeechhhhcccCCCCcccCCC
Q 020880           73 KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT----EN---KENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~----~~---~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      .++++|++||+||...    ..+++..+++|+.+++ ++.+++.    +.   ...++|++||.+.+.+..         
T Consensus        81 ~~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~-~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~---------  146 (254)
T d1sbya1          81 QLKTVDILINGAGILD----DHQIERTIAINFTGLV-NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH---------  146 (254)
T ss_dssp             HHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHH-HHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT---------
T ss_pred             HcCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHH-HHHHHHHHHhhhcccCCCceEEEEechhhccCCC---------
Confidence            5678999999999753    3577899999999986 5555443    22   234799999988764322         


Q ss_pred             CCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                       ....|+.+|.....+.+.+       +.++..+.||.|.-+-.............+.... .+          +.....
T Consensus       147 -~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~----------~~~~~~  214 (254)
T d1sbya1         147 -QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL-LS----------HPTQTS  214 (254)
T ss_dssp             -TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH-TT----------SCCEEH
T ss_pred             -CCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcc-cc----------CCCCCH
Confidence             3668999999999877764       3466789999886431000000000000111111 11          123468


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +++|++++.+++...     .+.++.+.+|.
T Consensus       215 e~va~~~~~~~~~~~-----tG~vi~vdgG~  240 (254)
T d1sbya1         215 EQCGQNFVKAIEANK-----NGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHHHHHHHHCC-----TTCEEEEETTE
T ss_pred             HHHHHHHHHhhhCCC-----CCCEEEECCCE
Confidence            999999998887643     24488888763

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.78  E-value=1.1e-18  Score=144.26  Aligned_cols=225  Identities=15%  Similarity=0.180  Sum_probs=143.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC------CCcceEEEeeCCCcccHHHHHH---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL------PHSFVFFDVDLKSGSGFDAVAL---   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~---   72 (320)
                      ++|.+|||||++-||.+++++|+++|   ++|++.+|++++.+...+.+      ..++.++.+|++|+++++++++   
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   80 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREG---AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   80 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999   89999999977665544332      2357889999999998877664   


Q ss_pred             -HhCCCCEEEECCCccCcc--------ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeechh-hhcccCCC
Q 020880           73 -KFGQPDVVVNCAALSVPR--------VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQ-VYEGVKSF  138 (320)
Q Consensus        73 -~~~~~d~Vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~-vy~~~~~~  138 (320)
                       .++++|++||+||...+.        .+.++++..+++|+.+++ .+.+++.    +.+- .+|.++|.. ...+.   
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~-~~~~~~~p~m~~~~g-~iI~~~S~~~~~~~~---  155 (264)
T d1spxa_          81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI-ALTKKAVPHLSSTKG-EIVNISSIASGLHAT---  155 (264)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTC-EEEEECCTTSSSSCC---
T ss_pred             HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHH-HHHhhhCCccccccC-cceeeeeeccccccC---
Confidence             457899999999975321        122346778999999985 5555543    3333 566665543 33221   


Q ss_pred             CcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCC-CCC---CChHHHHHHHHhcCCceEe
Q 020880          139 YKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISP-VPK---SLPIQWIDSVLSKGEKVEF  207 (320)
Q Consensus       139 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~  207 (320)
                             .....|+.+|...+.+.+.+       +.++..+.||.|--+-.... ...   ......... +.+..|+  
T Consensus       156 -------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~~Pl--  225 (264)
T d1spxa_         156 -------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT-MKECVPA--  225 (264)
T ss_dssp             -------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHH-HHHHCTT--
T ss_pred             -------CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHH-HHhcCCC--
Confidence                   12457999999999977764       34567799998854321100 000   000011111 1111111  


Q ss_pred             ecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          208 FHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       208 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                           .-+...+|+|++++.++..+.+. --.+.++.+.+|..
T Consensus       226 -----~R~g~pedvA~~v~fL~S~~~s~-~itG~~i~vDGG~s  262 (264)
T d1spxa_         226 -----GVMGQPQDIAEVIAFLADRKTSS-YIIGHQLVVDGGSS  262 (264)
T ss_dssp             -----SSCBCHHHHHHHHHHHHCHHHHT-TCCSCEEEESTTGG
T ss_pred             -----CCCcCHHHHHHHHHHHhCCcccC-CccCceEEeCCChh
Confidence                 23567999999999988643211 12344888887643

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.78  E-value=2.7e-18  Score=139.54  Aligned_cols=196  Identities=10%  Similarity=0.112  Sum_probs=138.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCC----ceEEEecCCCCChhhhhhh---CCCcceEEEeeCCCcccHHHHHH----
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKP----YDVAATHHSTPLPQLLLDA---LPHSFVFFDVDLKSGSGFDAVAL----   72 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v----~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----   72 (320)
                      +.||||||++-||.+++++|.++|..+    ..|....|+.+..+.+...   .+..+.++.+|++|+++++++++    
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            458999999999999999999999421    1388888887665554433   34567789999999998776654    


Q ss_pred             HhCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhh----hhhccCceEEEeechhhhcccCCCCcccCC
Q 020880           73 KFGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSS----FTENKENLLIHLSTDQVYEGVKSFYKEEDE  144 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~  144 (320)
                      .++++|++||+||.....    .+.++++..+++|+.+++ .+.++    +++.+-.++|++||.+.+.+..        
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~-~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~--------  152 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF-FLTQALFALMERQHSGHIFFITSVAATKAFR--------  152 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHH-HHHHHHhHHHHhcCCCceEEEechhhcCCCC--------
Confidence            557899999999986542    233456788999999986 54444    4455555999999988764322        


Q ss_pred             CCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCcee
Q 020880          145 IAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVY  217 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  217 (320)
                        ....|+.+|...+.+.+.+.       .++..+.||.+--+-.... .                     ......+..
T Consensus       153 --~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~-~---------------------~~~~~~~~~  208 (240)
T d2bd0a1         153 --HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-D---------------------DEMQALMMM  208 (240)
T ss_dssp             --TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-C---------------------STTGGGSBC
T ss_pred             --CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhc-C---------------------HhhHhcCCC
Confidence              25689999999998777642       3456788888743321000 0                     000112456


Q ss_pred             HHHHHHHHHHHHhhh
Q 020880          218 VRDVVKIILALTNRW  232 (320)
Q Consensus       218 v~D~a~~~~~~~~~~  232 (320)
                      .+|+|++++.++..+
T Consensus       209 PedvA~~v~~l~s~~  223 (240)
T d2bd0a1         209 PEDIAAPVVQAYLQP  223 (240)
T ss_dssp             HHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHcCC
Confidence            899999999998764

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.77  E-value=3.1e-18  Score=142.01  Aligned_cols=229  Identities=16%  Similarity=0.159  Sum_probs=146.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC------CCcceEEEeeCCCcccHHHHHH---
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL------PHSFVFFDVDLKSGSGFDAVAL---   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~---   72 (320)
                      ++|++|||||++-||.++++.|.++|   ++|++.+|++++.+...+.+      ...+.++.+|++|+++++++++   
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~G---a~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEG---ANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            57999999999999999999999999   89999999977665544332      1357789999999998777664   


Q ss_pred             -HhCCCCEEEECCCccCcccc--------ccCchhhhhccccccHHHHHhhhh----hccCceEEEeec-hhhhcccCCC
Q 020880           73 -KFGQPDVVVNCAALSVPRVC--------ENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLST-DQVYEGVKSF  138 (320)
Q Consensus        73 -~~~~~d~Vih~a~~~~~~~~--------~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss-~~vy~~~~~~  138 (320)
                       .++++|++||+||...+...        ..+++..+++|+.+++ .+.+++.    +.+- .+|.++| .+...+.   
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~-~~~~~~~p~m~~~~g-~iI~~~Ss~a~~~~~---  155 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI-EMTKKVKPHLVASKG-EIVNVSSIVAGPQAQ---  155 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTC-EEEEECCGGGSSSCC---
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHH-HHHHhhcccccccCC-ccccccchhccccCC---
Confidence             45789999999998654211        1135677889999985 5555543    3333 5555554 4433221   


Q ss_pred             CcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHh-cCCceEeecC
Q 020880          139 YKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLS-KGEKVEFFHD  210 (320)
Q Consensus       139 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  210 (320)
                             .....|+.+|...+.+.+.+       +.++-.+.||.|--+-................... .....+    
T Consensus       156 -------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~P----  224 (272)
T d1xkqa_         156 -------PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIP----  224 (272)
T ss_dssp             -------CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT----
T ss_pred             -------CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCC----
Confidence                   12568999999999977764       23566789988843311000000000011111111 111111    


Q ss_pred             cccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                       ..-+...+|+|++++.++....+. -..+.++.+.+|..+
T Consensus       225 -lgR~g~pediA~~v~fL~S~~as~-~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         225 -IGAAGKPEHIANIILFLADRNLSF-YILGQSIVADGGTSL  263 (272)
T ss_dssp             -TSSCBCHHHHHHHHHHHHCHHHHT-TCCSCEEEESTTGGG
T ss_pred             -CCCCcCHHHHHHHHHHHhCcchhC-CccCeEEEeCcCHHH
Confidence             123678999999999988543211 122458999887543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.77  E-value=4.8e-18  Score=139.82  Aligned_cols=222  Identities=18%  Similarity=0.109  Sum_probs=144.3

Q ss_pred             CCcEEEEEcCCC--hhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh--hCCCcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTG--YLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD--ALPHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG--~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      ++|++|||||+|  -||.+++++|+++|   ++|++..|++.......+  .......++.+|++|+++++++++    .
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~G---a~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAG---AEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA   83 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCC---CEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHh
Confidence            478999999998  69999999999999   889888887543322211  113456779999999998877664    4


Q ss_pred             hCCCCEEEECCCccCcc--------ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccC
Q 020880           74 FGQPDVVVNCAALSVPR--------VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                      ++++|++||+|+.....        ....++...+++|+.+.+ .+.+++...  .-.++|++||........       
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~-~~~~~~~~~~~~~G~Iv~isS~~~~~~~~-------  155 (256)
T d1ulua_          84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLV-AVARRAEPLLREGGGIVTLTYYASEKVVP-------  155 (256)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHTTTEEEEEEEEEEECGGGTSBCT-------
T ss_pred             cCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHH-HHHHHHHHHhccCCEEEEEeehHhcCCCC-------
Confidence            57899999999875321        112234567889998875 666555421  113899999988754322       


Q ss_pred             CCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                         ....|+.+|...+.+.+.+       +.++-.+.|+.+.-+.......   ....... +.+..++       .-+.
T Consensus       156 ---~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~---~~~~~~~-~~~~~pl-------~R~~  221 (256)
T d1ulua_         156 ---KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG---FTKMYDR-VAQTAPL-------RRNI  221 (256)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------CHHHHHH-HHHHSTT-------SSCC
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhh---hHHHHHH-HHhcCCC-------CCCc
Confidence               3668999999999977764       3455679999886543321110   0112222 2122222       2257


Q ss_pred             eHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          217 YVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ..+|+|+++..++......  -.+.++.+.+|..
T Consensus       222 ~pedvA~~v~fL~S~~s~~--itG~~i~VDGG~~  253 (256)
T d1ulua_         222 TQEEVGNLGLFLLSPLASG--ITGEVVYVDAGYH  253 (256)
T ss_dssp             CHHHHHHHHHHHHSGGGTT--CCSCEEEESTTGG
T ss_pred             CHHHHHHHHHHHhCchhCC--ccCCeEEECcCEe
Confidence            7999999999998654321  2345888887743

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.5e-18  Score=141.63  Aligned_cols=222  Identities=17%  Similarity=0.120  Sum_probs=152.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|++|||||++-||+++++.|+++|   ++|++.+|++++.+++.+.  ..+....+|+.+.+.++...+.++++|++||
T Consensus         6 gK~alITGas~GIG~aia~~la~~G---~~Vi~~~r~~~~l~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn   80 (245)
T d2ag5a1           6 GKVIILTAAAQGIGQAAALAFAREG---AKVIATDINESKLQELEKY--PGIQTRVLDVTKKKQIDQFANEVERLDVLFN   80 (245)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHGGGGGS--TTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHhc--cCCceeeeeccccccccccccccccceeEEe
Confidence            5899999999999999999999999   8999999997766655543  3567788899888888888888889999999


Q ss_pred             CCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCCCCcchHHHH
Q 020880           83 CAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKS  154 (320)
Q Consensus        83 ~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~s  154 (320)
                      +||...+..    +.++++..+++|+.+++ .+.+++    .+.+..++|++||...--         .+..+...|+.+
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~-~~~~~~~~~~~~~~~g~Ii~isS~~~~~---------~~~~~~~~Y~~s  150 (245)
T d2ag5a1          81 VAGFVHHGTVLDCEEKDWDFSMNLNVRSMY-LMIKAFLPKMLAQKSGNIINMSSVASSV---------KGVVNRCVYSTT  150 (245)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEECCSBTTT---------BCCTTBHHHHHH
T ss_pred             cccccCCCChhhCCHHHHHHHHHHhhccch-hHHHhhCcccccCCCceeeeeechhhcc---------CCccchhHHHHH
Confidence            999876532    23355678899999985 555544    344455899998865310         112346789999


Q ss_pred             HHHHHHHHHHHc-------CCeeEEeecccccCCCCCCC-CCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHH
Q 020880          155 KVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPV-PKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL  226 (320)
Q Consensus       155 K~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  226 (320)
                      |...+.+.+.+.       .++..+.||.+-.|...... ............. ...++       ..+...+|+|+++.
T Consensus       151 Kaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~-~~~pl-------~R~~~pedva~~v~  222 (245)
T d2ag5a1         151 KAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFL-KRQKT-------GRFATAEEIAMLCV  222 (245)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHH-HTCTT-------SSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHH-hcCCC-------CCCcCHHHHHHHHH
Confidence            999999887653       34567889888543210000 0000111111111 12222       23678999999999


Q ss_pred             HHHhhhhccccccCceeEecCCC
Q 020880          227 ALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       227 ~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      .++.....  ...+.++.+.+|.
T Consensus       223 fL~s~~s~--~iTG~~i~VDGG~  243 (245)
T d2ag5a1         223 YLASDESA--YVTGNPVIIDGGW  243 (245)
T ss_dssp             HHHSGGGT--TCCSCEEEECTTG
T ss_pred             HHhChhhC--CCcCceEEeCCCc
Confidence            99875432  2234588888764

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.77  E-value=1e-17  Score=138.01  Aligned_cols=222  Identities=18%  Similarity=0.131  Sum_probs=146.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhh---hhhhCCCcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQL---LLDALPHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      .+|++|||||++-||.++++.|+++|   ++|+...|+.+. .+.   .....+.++.++.+|++|+++++++++    +
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G---~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRG---ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999   888877665433 332   233445678889999999998777664    5


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhh----hccCceEEEeech-hhhcccCCCCcccCC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTD-QVYEGVKSFYKEEDE  144 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~-~vy~~~~~~~~E~~~  144 (320)
                      ++++|++||+||.....    .+.+.++..+++|+.+.+ .+++++.    +.+  +++.++|. +.+.+.         
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~m~~~g--~~iii~s~~~~~~~~---------  149 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQF-FVAQQGLKHCRRGG--RIILTSSIAAVMTGI---------  149 (259)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHEEEEE--EEEEECCGGGTCCSC---------
T ss_pred             cCCCcEEEeccccccccccccchHHHHHHHHhhccceee-eehhhhhhhhhcCC--cccccccccccccCC---------
Confidence            57899999999986543    223445678899998875 5555553    333  56666554 333221         


Q ss_pred             CCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccC--------CCCCCCCCCChHHHHHHHHhcCCceEeec
Q 020880          145 IAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGP--------QTISPVPKSLPIQWIDSVLSKGEKVEFFH  209 (320)
Q Consensus       145 ~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (320)
                       .....|+.+|...+.+.+.+       +.++-.+.||.+--+        ..... ........+...+.+..++.   
T Consensus       150 -~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~pl~---  224 (259)
T d1ja9a_         150 -PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGG-YKGMPQEKIDEGLANMNPLK---  224 (259)
T ss_dssp             -CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTC-CTTCCHHHHHHHHHHTSTTS---
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhh-cccCCHHHHHHHHHhCCCCC---
Confidence             12568999999999977764       245667999987421        10000 11111122333333333332   


Q ss_pred             CcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          210 DECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       210 ~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                          -+...+|+|++++.++.....  --.+.++.+.+|.
T Consensus       225 ----R~g~p~eVa~~v~fL~S~~a~--~itG~~i~vDGG~  258 (259)
T d1ja9a_         225 ----RIGYPADIGRAVSALCQEESE--WINGQVIKLTGGG  258 (259)
T ss_dssp             ----SCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTC
T ss_pred             ----CCcCHHHHHHHHHHHhCchhc--CCcCceEEeCCCC
Confidence                367899999999999876432  1234588887763

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.1e-18  Score=144.46  Aligned_cols=223  Identities=10%  Similarity=0.133  Sum_probs=149.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh--------CCCcceEEEeeCCCcccHHHHHH-
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA--------LPHSFVFFDVDLKSGSGFDAVAL-   72 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~-   72 (320)
                      .+|++|||||++-||.++++.|+++|   ++|++..|+.++.+...+.        .+.++.++.+|++|+++++++++ 
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~G---a~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELG---SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            47899999999999999999999999   8999999987665443322        13467789999999999877664 


Q ss_pred             ---HhCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcc
Q 020880           73 ---KFGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        73 ---~~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                         .++++|++||+||.....    .+.++++..+++|+.+++ .+.+++    .+.+..++|.+||....+.       
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~-~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~-------  159 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF-YMCKAVYSSWMKEHGGSIVNIIVPTKAGF-------  159 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHTHHHHCEEEEEECCCCTTCC-------
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchh-hHHHHHHHhhccccccccccccccccccc-------
Confidence               457899999999976432    223456778899999986 555554    3445557888876543321       


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                          .....|+.+|...+.+.+.+.       .++-.+.||.|.-+...... ......+..... ...+       ..-
T Consensus       160 ----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~-~~~p-------lgR  226 (297)
T d1yxma1         160 ----PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENY-GSWGQSFFEGSF-QKIP-------AKR  226 (297)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTS-GGGGGGGGTTGG-GGST-------TSS
T ss_pred             ----cccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhc-cccCHHHHHHHH-hcCC-------CCC
Confidence                125689999999999877643       34567999988654321100 000000111000 1111       123


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +...+|+|.+++.++.....  -..+.++.+.+|..
T Consensus       227 ~g~pedvA~~v~fL~Sd~s~--~iTG~~i~VDGG~s  260 (297)
T d1yxma1         227 IGVPEEVSSVVCFLLSPAAS--FITGQSVDVDGGRS  260 (297)
T ss_dssp             CBCTHHHHHHHHHHHSGGGT--TCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHhCchhc--CcCCcEEEeCcChh
Confidence            56789999999999865321  12355899988743

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.77  E-value=7.7e-18  Score=138.74  Aligned_cols=225  Identities=13%  Similarity=0.096  Sum_probs=151.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh----hCCCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD----ALPHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      +|++|||||++-||.++++.|+++|   ++|++..|++++..+..+    ..+.++.++.+|++|+++++++++    .+
T Consensus         9 gK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           9 NKTIIVTGGNRGIGLAFTRAVAAAG---ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   85 (260)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            7899999999999999999999999   999999999887655433    335678889999999999877664    55


Q ss_pred             CCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hh-ccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TE-NKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~-~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +++|++||+||.....    .+.++++..+++|+.+++ .+.+++    .+ .+...++..||...+......+   ...
T Consensus        86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~-~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~---~~~  161 (260)
T d1h5qa_          86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVF-NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL---NGS  161 (260)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET---TEE
T ss_pred             CCCcEecccccccccCCHHHhccccccccccccccchh-hhhhhhcccccccccceEEEEeecccccccccccc---ccC
Confidence            7899999999976442    233456778899999885 554443    22 3344677777766543221100   011


Q ss_pred             CCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                      .....|+.+|...+.+.+.+.       .++-.+.||.+--+...     ......... .....++.       -+...
T Consensus       162 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~-----~~~~~~~~~-~~~~~pl~-------R~g~p  228 (260)
T d1h5qa_         162 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA-----HMDKKIRDH-QASNIPLN-------RFAQP  228 (260)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG-----GSCHHHHHH-HHHTCTTS-------SCBCG
T ss_pred             ccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchh-----ccCHHHHHH-HHhcCCCC-------CCcCH
Confidence            235689999999999777643       34567889888543211     111122222 22222222       25779


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      +|+|++++.++.....  -..+.++.+.+|.
T Consensus       229 edvA~~v~fL~S~~s~--~itG~~i~VDGG~  257 (260)
T d1h5qa_         229 EEMTGQAILLLSDHAT--YMTGGEYFIDGGQ  257 (260)
T ss_dssp             GGGHHHHHHHHSGGGT--TCCSCEEEECTTG
T ss_pred             HHHHHHHHHHhcchhC--CCcCceEEECCCe
Confidence            9999999998865321  1235588888874

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=9e-19  Score=142.45  Aligned_cols=193  Identities=14%  Similarity=0.090  Sum_probs=140.3

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh---hCCCcceEEEeeCCCcccHHHHHH----Hh
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVAL----KF   74 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~----~~   74 (320)
                      ++|.++||||++-||.+++++|+++|   ++|+..+|++++.+.+.+   ..+.++..+.+|++|++++.++++    .+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G---~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLK---SKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999   899999999876655544   335678889999999998877664    56


Q ss_pred             CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHh----hhhhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLS----SFTENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~----~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +++|++||+||......    ..+.++..+++|+.+++ .+.+    .+.+.+-.++|++||...+.+..          
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~----------  151 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF-WTTKAFLPAMTKNNHGHIVTVASAAGHVSVP----------  151 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCEEEEEECCCC-CCCHH----------
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccH-HHHHHHhhhHHhcCCceEEEeecchhcCCCC----------
Confidence            78999999999875432    22345688899999985 4444    44555556999999998764321          


Q ss_pred             CcchHHHHHHHHHHHHHHHc----------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          147 PVNVYGKSKVAAEKFIYEKC----------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~~----------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                      ....|+.+|...+.+.+.+.          .++..+.||.|--+-.    .. .    ..              .....+
T Consensus       152 ~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~----~~-~----~~--------------~~~~~~  208 (244)
T d1yb1a_         152 FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFI----KN-P----ST--------------SLGPTL  208 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCST----TC-T----HH--------------HHCCCC
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhh----hC-c----Cc--------------cccCCC
Confidence            25689999999998777643          2456788887732211    00 0    00              011235


Q ss_pred             eHHHHHHHHHHHHhh
Q 020880          217 YVRDVVKIILALTNR  231 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~  231 (320)
                      ..+|+|+.++..+..
T Consensus       209 ~pe~va~~i~~~~~~  223 (244)
T d1yb1a_         209 EPEEVVNRLMHGILT  223 (244)
T ss_dssp             CHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHhc
Confidence            688999999888766

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.75  E-value=7.3e-17  Score=133.78  Aligned_cols=227  Identities=13%  Similarity=0.058  Sum_probs=147.9

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhh---hhCCCcceEEEeeCCCcccHHHHHH----
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLL---DALPHSFVFFDVDLKSGSGFDAVAL----   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~----   72 (320)
                      |++|++|||||++-||.++++.|+++|   ++|++.+|+.+. .+...   ...+..+.++.+|++|++++.++++    
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~G---a~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRG---CKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            357999999999999999999999999   899988887543 22222   2335678889999999998877664    


Q ss_pred             HhCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCC
Q 020880           73 KFGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      .++++|+++|+++.....    ....++...+++|+.+++ .+.+++...  .-.++++++|......         +..
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~-~~~~~~~~~m~~~g~~i~i~s~~~~~~---------~~~  162 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQF-FVAREAYKHLEIGGRLILMGSITGQAK---------AVP  162 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHSCTTCEEEEECCGGGTCS---------SCS
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceee-eeccccccccccccccccccccccccc---------ccc
Confidence            457899999999986542    223345677889999885 555555431  1137777777653211         122


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCC-------CCCCCCCCChHHHHHHHHhcCCceEeecCcc
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQ-------TISPVPKSLPIQWIDSVLSKGEKVEFFHDEC  212 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
                      ....|+.+|...+.+.+.+       +.++-.+.||.+--+-       ......................++.      
T Consensus       163 ~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg------  236 (272)
T d1g0oa_         163 KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR------  236 (272)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTC------
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCC------
Confidence            3567999999999977653       3466779999884321       0000001111111111111222221      


Q ss_pred             cCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       213 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                       -+...+|+|+++..++.....  -..+.++.+.+|.
T Consensus       237 -R~~~peevA~~v~fL~s~~s~--~itG~~i~vDGG~  270 (272)
T d1g0oa_         237 -RVGLPIDIARVVCFLASNDGG--WVTGKVIGIDGGA  270 (272)
T ss_dssp             -SCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTC
T ss_pred             -CCcCHHHHHHHHHHHhCchhc--CccCceEeECCCC
Confidence             367899999999999865431  1235588888874

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.75  E-value=8.6e-18  Score=137.75  Aligned_cols=172  Identities=16%  Similarity=0.134  Sum_probs=124.0

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh----C-
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF----G-   75 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~-   75 (320)
                      |++|+||||||++-||.+++++|+++|+. +.|++..|+.++.+.+.+..+.++.++.+|++|.++++++++.+    + 
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~-~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   79 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNI-RHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTC-CEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCC-CEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence            88899999999999999999999999965 57889999988877776666678899999999999987776533    2 


Q ss_pred             -CCCEEEECCCccCcc--cc---ccCchhhhhccccccHHHHHhhhh----hcc-----------CceEEEeechhhhcc
Q 020880           76 -QPDVVVNCAALSVPR--VC---ENDPDSAMSINVPSSLVNWLSSFT----ENK-----------ENLLIHLSTDQVYEG  134 (320)
Q Consensus        76 -~~d~Vih~a~~~~~~--~~---~~~~~~~~~~n~~~~~~~~l~~~~----~~~-----------~~~~v~~Ss~~vy~~  134 (320)
                       ++|++||+||...+.  ..   ..+.+..+++|+.+++ .+.+++.    +.+           ..+++.+|+...+-.
T Consensus        80 ~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~  158 (250)
T d1yo6a1          80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVV-LLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHH-HHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHH-HHHHHHHHHHHHhccCCCCccccceecccccccccccccc
Confidence             489999999975431  11   2234578899999986 5555543    211           136777777654321


Q ss_pred             cCCCCcccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeeccc
Q 020880          135 VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSII  177 (320)
Q Consensus       135 ~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v  177 (320)
                      ...   ...+..|...|+.||.....+.+.+.       .++..+.||.|
T Consensus       159 ~~~---~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v  205 (250)
T d1yo6a1         159 DNT---SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWV  205 (250)
T ss_dssp             TCC---STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC
T ss_pred             CCc---ccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCC
Confidence            111   11123345679999999999777643       35566778766

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.3e-17  Score=136.93  Aligned_cols=205  Identities=13%  Similarity=0.143  Sum_probs=138.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHH----H
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      .|.+|||||++-||.++++.|+++|   ++|++..|++++.+.+.+.+     +..+.++.+|++|+++++++++    .
T Consensus        10 ~Kv~lITGas~GIG~aiA~~la~~G---~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_          10 DRLALVTGASGGIGAAVARALVQQG---LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            6899999999999999999999999   89999999977666544432     2467789999999998777654    5


Q ss_pred             hCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhhh----hhcc--CceEEEeechhhhcccCCCCcccC
Q 020880           74 FGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSSF----TENK--ENLLIHLSTDQVYEGVKSFYKEED  143 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~~----~~~~--~~~~v~~Ss~~vy~~~~~~~~E~~  143 (320)
                      ++++|++||+||...+.    .+.++++..+++|+.+.+ .+.+++    ++.+  -.++|++||.+.+...        
T Consensus        87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~-~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~--------  157 (257)
T d1xg5a_          87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALS-ICTREAYQSMKERNVDDGHIININSMSGHRVL--------  157 (257)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC--------
T ss_pred             cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHH-HHHHHHHHHHHHhccCCCceEEEechHhcCCC--------
Confidence            67899999999986542    234456788899999886 544443    3332  3489999998865321        


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHc---------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          144 EIAPVNVYGKSKVAAEKFIYEKC---------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       144 ~~~p~~~Y~~sK~~~e~~~~~~~---------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                      |......|+.+|...+.+.+.+.         .++..+.|+.+=.+.... ....... .+....           ....
T Consensus       158 p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~-~~~~~~~-~~~~~~-----------~~~r  224 (257)
T d1xg5a_         158 PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFK-LHDKDPE-KAAATY-----------EQMK  224 (257)
T ss_dssp             SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHH-HTTTCHH-HHHHHH-----------C---
T ss_pred             CCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhh-cChhhHH-HHHhcC-----------CCCC
Confidence            11124579999999999776442         234557776553221000 0000110 111100           1123


Q ss_pred             ceeHHHHHHHHHHHHhhh
Q 020880          215 PVYVRDVVKIILALTNRW  232 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~  232 (320)
                      ++..+|+|++++.++..+
T Consensus       225 ~~~pedvA~~v~fL~s~~  242 (257)
T d1xg5a_         225 CLKPEDVAEAVIYVLSTP  242 (257)
T ss_dssp             CBCHHHHHHHHHHHHHSC
T ss_pred             CcCHHHHHHHHHHHhCCh
Confidence            678999999999998764

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.74  E-value=1.8e-17  Score=138.96  Aligned_cols=207  Identities=16%  Similarity=0.134  Sum_probs=140.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC---------hhhhhhhCCCcceEEEeeCCCcccHHHHH-
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL---------PQLLLDALPHSFVFFDVDLKSGSGFDAVA-   71 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~---------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-   71 (320)
                      ++|++|||||++-||.++++.|+++|   ++|++.+|+.+.         .+...+........+.+|+.|.++.++++ 
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~G---a~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~   82 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERG---ALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   82 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHH
Confidence            37899999999999999999999999   899988775432         22333333333445788999988765544 


Q ss_pred             ---HHhCCCCEEEECCCccCcc----ccccCchhhhhccccccHHHHHhh----hhhccCceEEEeechhhhcccCCCCc
Q 020880           72 ---LKFGQPDVVVNCAALSVPR----VCENDPDSAMSINVPSSLVNWLSS----FTENKENLLIHLSTDQVYEGVKSFYK  140 (320)
Q Consensus        72 ---~~~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~~~~v~~Ss~~vy~~~~~~~~  140 (320)
                         +.++++|++||+||...+.    .+.++++..+++|+.+++ .+.++    +++.+-.+||++||...+.+..    
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~-~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~----  157 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSF-QVTRAAWDHMKKQNYGRIIMTASASGIYGNF----  157 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhH-HHHHHhHHHHHhCCCcEEEEeCChhhcCCCC----
Confidence               5667899999999987542    223456788899999986 55544    4455556999999988653322    


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCccc
Q 020880          141 EEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECR  213 (320)
Q Consensus       141 E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
                            ....|+.+|...+.+.+.+.       .++..+.|+.+--+..     .... .-+                 .
T Consensus       158 ------~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~-----~~~~-~~~-----------------~  208 (302)
T d1gz6a_         158 ------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTE-----TVMP-EDL-----------------V  208 (302)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTG-----GGSC-HHH-----------------H
T ss_pred             ------CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchh-----hcCc-Hhh-----------------H
Confidence                  25789999999999877653       3456688876521111     1111 111                 1


Q ss_pred             CceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       214 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                      .++..+|+|.++++++... +  ...+.++.+.+|
T Consensus       209 ~~~~PedvA~~v~fL~S~~-a--~itG~~i~vdGG  240 (302)
T d1gz6a_         209 EALKPEYVAPLVLWLCHES-C--EENGGLFEVGAG  240 (302)
T ss_dssp             HHSCGGGTHHHHHHHTSTT-C--CCCSCEEEEETT
T ss_pred             hcCCHHHHHHHHHHHcCCC-c--CCCCcEEEeCCC
Confidence            1345789999999987532 1  123557777665

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.73  E-value=3e-17  Score=134.31  Aligned_cols=165  Identities=14%  Similarity=0.109  Sum_probs=119.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhh---ccCCCceEEEecCCCCChhhhhhh--CCCcceEEEeeCCCcccHHHHHHH----
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSE---IEGKPYDVAATHHSTPLPQLLLDA--LPHSFVFFDVDLKSGSGFDAVALK----   73 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~---~g~~v~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~----   73 (320)
                      ||+||||||++-||.+++++|++   +|   ++|++.+|++++.+.+.+.  ...++.++.+|++|+++++++++.    
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPP---QHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCC---SEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence            68999999999999999999974   67   8999999998887655431  245788899999999998887763    


Q ss_pred             --hCCCCEEEECCCccCcc--ccc---cCchhhhhccccccHHHHHhhhh----hc-----------cCceEEEeechhh
Q 020880           74 --FGQPDVVVNCAALSVPR--VCE---NDPDSAMSINVPSSLVNWLSSFT----EN-----------KENLLIHLSTDQV  131 (320)
Q Consensus        74 --~~~~d~Vih~a~~~~~~--~~~---~~~~~~~~~n~~~~~~~~l~~~~----~~-----------~~~~~v~~Ss~~v  131 (320)
                        ++++|++||+||.....  ..+   .+.+..+++|+.+++ .+.+++.    +.           +..++|.+||...
T Consensus        79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~-~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g  157 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPI-MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG  157 (248)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred             hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHH-HHHHHHHHHHHHhhhcccccccccccccccccccccc
Confidence              25799999999975432  112   224567899999985 5555442    21           2348999999764


Q ss_pred             hcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccc
Q 020880          132 YEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIY  178 (320)
Q Consensus       132 y~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~  178 (320)
                      .-..       .+......|+.||.....+.+.+       +.++..+.||.|-
T Consensus       158 ~~~~-------~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~  204 (248)
T d1snya_         158 SIQG-------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK  204 (248)
T ss_dssp             CSTT-------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred             ccCC-------CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCccc
Confidence            3111       11223558999999999877654       2456678888773

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.73  E-value=5.7e-17  Score=133.63  Aligned_cols=199  Identities=14%  Similarity=0.079  Sum_probs=140.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCC---CChhhhhh---hCCCcceEEEeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHST---PLPQLLLD---ALPHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~---~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      ..+||||||+|-||.+++++|.++|   . .|+.+.|+.   +....+..   ..+..+.++.+|++|+++++++++.+.
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~G---a~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~   85 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRG---APHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG   85 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHT---CSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCC---CCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccc
Confidence            3589999999999999999999999   5 577778763   23333322   335678889999999999999887542


Q ss_pred             ---CCCEEEECCCccCccccc----cCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcccCCCCcccCCCCCc
Q 020880           76 ---QPDVVVNCAALSVPRVCE----NDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV  148 (320)
Q Consensus        76 ---~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~  148 (320)
                         ++|.|||+++........    .+.+..+..|+.+.. ++.+++...+..++|++||....-+..          ..
T Consensus        86 ~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~-~l~~~~~~~~~~~iv~~SS~a~~~g~~----------~~  154 (259)
T d2fr1a1          86 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGAR-NLHELTRELDLTAFVLFSSFASAFGAP----------GL  154 (259)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHH-HHHHHHTTSCCSEEEEEEEHHHHTCCT----------TC
T ss_pred             ccccccccccccccccccccccccHHHHHHHhhhhccchh-HHHHHhhccCCceEeeecchhhccCCc----------cc
Confidence               589999999987543222    223456788999885 888888777777999999988754332          25


Q ss_pred             chHHHHHHHHHHHHHHH---cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHH
Q 020880          149 NVYGKSKVAAEKFIYEK---CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII  225 (320)
Q Consensus       149 ~~Y~~sK~~~e~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  225 (320)
                      ..|+.+|...+.+.+.+   +.++..+.||.+.+++-..        ..+...+.. .-+        ..+..+++++++
T Consensus       155 ~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~--------~~~~~~~~~-~G~--------~~~~~~~~~~~l  217 (259)
T d2fr1a1         155 GGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAE--------GPVADRFRR-HGV--------IEMPPETACRAL  217 (259)
T ss_dssp             TTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC--------------------CTT-TTE--------ECBCHHHHHHHH
T ss_pred             HHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCcccc--------chHHHHHHh-cCC--------CCCCHHHHHHHH
Confidence            67999999999877764   5688999999887654210        011111111 111        247799999999


Q ss_pred             HHHHhhh
Q 020880          226 LALTNRW  232 (320)
Q Consensus       226 ~~~~~~~  232 (320)
                      ..++...
T Consensus       218 ~~~l~~~  224 (259)
T d2fr1a1         218 QNALDRA  224 (259)
T ss_dssp             HHHHHTT
T ss_pred             HHHHhCC
Confidence            9998874

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.73  E-value=3e-17  Score=134.47  Aligned_cols=218  Identities=12%  Similarity=0.075  Sum_probs=147.4

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHH----HHhCCCCEE
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVA----LKFGQPDVV   80 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----~~~~~~d~V   80 (320)
                      ++|||||++-||..+++.|.++|   ++|.+..|+.+..+++...   ...+..+|++|.+++++++    +.++++|++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~G---a~V~i~~r~~~~~~~~~~~---~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiL   75 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAG---HTVACHDESFKQKDELEAF---AETYPQLKPMSEQEPAELIEAVTSAYGQVDVL   75 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTT---CEEEECCGGGGSHHHHHHH---HHHCTTSEECCCCSHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHhh---hCcEEEeccCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999   8999999987766554432   1223578999988876655    456799999


Q ss_pred             EECCCccCc--c---ccccCchhhhhccccccHHHHHhh----hhhccCceEEEeechhhhcccCCCCcccCCCCCcchH
Q 020880           81 VNCAALSVP--R---VCENDPDSAMSINVPSSLVNWLSS----FTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVY  151 (320)
Q Consensus        81 ih~a~~~~~--~---~~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y  151 (320)
                      ||+||....  +   .+.++++..+++|+.+++ .+.++    +++.+-.++|++||...+.+..          ....|
T Consensus        76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~-~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~----------~~~~Y  144 (252)
T d1zmta1          76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPF-ALVNAVASQMKKRKSGHIIFITSATPFGPWK----------ELSTY  144 (252)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCCEEEEECCSTTTSCCT----------TCHHH
T ss_pred             EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHH-HHHHHHHHhhcccccceeecccccccccccc----------ccccc
Confidence            999986532  1   223446677889999885 55544    4445545999999998765432          25689


Q ss_pred             HHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCC---CChHHHHHHHHhcCCceEeecCcccCceeHHHH
Q 020880          152 GKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPK---SLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV  221 (320)
Q Consensus       152 ~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  221 (320)
                      +.+|...+.+.+.+       +.++-.+.|+.+-.+........   ......... +.+..++       .-+...+|+
T Consensus       145 ~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~-~~~~~pl-------~R~g~pedv  216 (252)
T d1zmta1         145 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAH-VKKVTAL-------QRLGTQKEL  216 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHH-HHHHSSS-------SSCBCHHHH
T ss_pred             ccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHH-HHhcCCC-------CCCcCHHHH
Confidence            99999999977764       34677899999865432111000   000111211 1112222       125789999


Q ss_pred             HHHHHHHHhhhhccccccCceeEecCCC
Q 020880          222 VKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       222 a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      |+++++++....+  -..+.++.+.+|-
T Consensus       217 A~~v~fL~S~~s~--~iTG~~i~vdGG~  242 (252)
T d1zmta1         217 GELVAFLASGSCD--YLTGQVFWLAGGF  242 (252)
T ss_dssp             HHHHHHHHTTSCG--GGTTCEEEESTTC
T ss_pred             HHHHHHHhCchhc--CCcCCeEEECCCc
Confidence            9999999865321  1235589998874

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=5.4e-17  Score=135.24  Aligned_cols=165  Identities=21%  Similarity=0.260  Sum_probs=123.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh---h---CCCcceEEEeeCCCcccHHHHHHHh--
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD---A---LPHSFVFFDVDLKSGSGFDAVALKF--   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~---~---~~~~~~~~~~Dl~d~~~~~~~~~~~--   74 (320)
                      +|.||||||++-||.++++.|.++|..|+.|....|+.+....+.+   .   .+..+..+.+|++|++++.++++.+  
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            5678999999999999999999999665667777776544433322   1   2457888999999999999888754  


Q ss_pred             CCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhh----hhhccCceEEEeechhhhcccCCCCcccCCCC
Q 020880           75 GQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSS----FTENKENLLIHLSTDQVYEGVKSFYKEEDEIA  146 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~----~~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~  146 (320)
                      +.+|+++|+|+......    +.++++..+++|+.+++ ++.++    +++.+-.++|++||.+..-+.          .
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~-~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~----------~  150 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV-RMLQAFLPDMKRRGSGRVLVTGSVGGLMGL----------P  150 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHTCEEEEEEEEGGGTSCC----------T
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHH-HHHHHHHHHHHHcCCCceEEEechhhcCCC----------C
Confidence            57999999999875532    23445677899999985 55444    455555699999998875432          2


Q ss_pred             CcchHHHHHHHHHHHHHHH-------cCCeeEEeecccc
Q 020880          147 PVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIY  178 (320)
Q Consensus       147 p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~  178 (320)
                      ....|+.+|...+.+.+.+       +.++.++.||.|-
T Consensus       151 ~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~  189 (285)
T d1jtva_         151 FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVH  189 (285)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCC
Confidence            3568999999999977654       3456779998884

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.71  E-value=2e-16  Score=132.78  Aligned_cols=222  Identities=14%  Similarity=0.115  Sum_probs=144.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh----hCCCcceEEEeeCCCcccHHHHH----HHh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD----ALPHSFVFFDVDLKSGSGFDAVA----LKF   74 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~----~~~   74 (320)
                      +|++|||||+|-||.+++++|+++|   ++|++.+|+.++.....+    ..+..+.++.+|++|.+++.+++    +.+
T Consensus        25 gK~alITGas~GIG~aiA~~la~~G---a~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~  101 (294)
T d1w6ua_          25 GKVAFITGGGTGLGKGMTTLLSSLG---AQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA  101 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc
Confidence            5899999999999999999999999   899999999766544333    33567788999999999877655    345


Q ss_pred             CCCCEEEECCCccCccccc----cCchhhhhccccccHHHHHhhh----h-hccCceEEEeechhhhcccCCCCcccCCC
Q 020880           75 GQPDVVVNCAALSVPRVCE----NDPDSAMSINVPSSLVNWLSSF----T-ENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~~~l~~~----~-~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      +++|++||+||........    .+....+.+|..... .+...+    . ..+...++.+||........         
T Consensus       102 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~---------  171 (294)
T d1w6ua_         102 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTA-FVTLEIGKQLIKAQKGAAFLSITTIYAETGSG---------  171 (294)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT---------
T ss_pred             cccchhhhhhhhccccccccchhhhhhhheeeecccch-hhhhhhhcccccccccccccccccchhhhccc---------
Confidence            7899999999986543222    223455666766543 332222    2 23334677777765543221         


Q ss_pred             CCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeH
Q 020880          146 APVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV  218 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  218 (320)
                       ....|+.+|...+.+.+.+.       .++-++.||.|--+.........-  ....... ...++       .-+...
T Consensus       172 -~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~--~~~~~~~-~~~pl-------~R~~~p  240 (294)
T d1w6ua_         172 -FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTG--TFEKEMI-GRIPC-------GRLGTV  240 (294)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTS--HHHHHHH-TTCTT-------SSCBCH
T ss_pred             -ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcH--HHHHHHh-hcCCC-------CCCCCH
Confidence             25679999999999887643       355679999986554211111110  1222222 22222       135679


Q ss_pred             HHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       219 ~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +|+|+++..++.....  -..|.++.+.+|..
T Consensus       241 ediA~~v~fL~sd~s~--~itG~~i~vDGG~~  270 (294)
T d1w6ua_         241 EELANLAAFLCSDYAS--WINGAVIKFDGGEE  270 (294)
T ss_dssp             HHHHHHHHHHTSGGGT--TCCSCEEEESTTHH
T ss_pred             HHHHHHHHHHhCchhc--CCCCcEEEECCChh
Confidence            9999999999865321  12355899988753

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.1e-15  Score=124.84  Aligned_cols=204  Identities=17%  Similarity=0.206  Sum_probs=141.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----HhCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQP   77 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~~   77 (320)
                      ++|.+|||||++-||.+++++|.++|   ++|++.+|+.+..+...+.+.........|+.+.+.+++...    .....
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQG---ASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV   80 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccc
Confidence            47899999999999999999999999   899999999998888888777778888999999776655443    33578


Q ss_pred             CEEEECCCccCccc----------cccCchhhhhccccccHHHHHhhhhh----------ccCceEEEeechhhhcccCC
Q 020880           78 DVVVNCAALSVPRV----------CENDPDSAMSINVPSSLVNWLSSFTE----------NKENLLIHLSTDQVYEGVKS  137 (320)
Q Consensus        78 d~Vih~a~~~~~~~----------~~~~~~~~~~~n~~~~~~~~l~~~~~----------~~~~~~v~~Ss~~vy~~~~~  137 (320)
                      |.++++++......          ..+.++..+++|+.+++ ++.+++..          .+..++|++||.+.+.+.  
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~-~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~--  157 (248)
T d2o23a1          81 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF-NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ--  157 (248)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHH-HHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC--
T ss_pred             cccccccccccCCCcccccccccchHHHHHHHHhHHHHHHH-HHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC--
Confidence            99998876543211          11234577889999986 77666532          122379999999876432  


Q ss_pred             CCcccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecC
Q 020880          138 FYKEEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD  210 (320)
Q Consensus       138 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (320)
                              .+...|+.+|...+.+.+.+.       .++..+.||.+--+-..     ......... +....++     
T Consensus       158 --------~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~-----~~~~~~~~~-~~~~~pl-----  218 (248)
T d2o23a1         158 --------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT-----SLPEKVCNF-LASQVPF-----  218 (248)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CH-HHHTCSS-----
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhh-----cCCHHHHHH-HHhcCCC-----
Confidence                    236689999999999887653       24567888887543211     111111111 1111111     


Q ss_pred             cccCceeHHHHHHHHHHHHhh
Q 020880          211 ECRCPVYVRDVVKIILALTNR  231 (320)
Q Consensus       211 ~~~~~i~v~D~a~~~~~~~~~  231 (320)
                       ..-+...+|+|++++.+++.
T Consensus       219 -~~R~g~peevA~~v~fL~s~  238 (248)
T d2o23a1         219 -PSRLGDPAEYAHLVQAIIEN  238 (248)
T ss_dssp             -SCSCBCHHHHHHHHHHHHHC
T ss_pred             -CCCCcCHHHHHHHHHHHHhC
Confidence             01256899999999998864

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.67  E-value=5.8e-17  Score=133.47  Aligned_cols=165  Identities=14%  Similarity=0.115  Sum_probs=120.9

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhh---ccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHH
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSE---IEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~---~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      |.+|.++||||++-||.+++++|.+   +|   ++|++..|++++.+.+.+.+     +..+.++.+|++|+++++++++
T Consensus         4 L~gKvalITGas~GIG~aiA~~lA~~~~~G---~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~   80 (259)
T d1oaaa_           4 LGCAVCVLTGASRGFGRALAPQLARLLSPG---SVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLS   80 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTT---CEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHhcccCC---CEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHH
Confidence            4678999999999999999999964   78   89999999987766554432     3467789999999999888775


Q ss_pred             Hh--------CCCCEEEECCCccCcc----ccc---cCchhhhhccccccHHHHHhhhh----hcc--CceEEEeechhh
Q 020880           73 KF--------GQPDVVVNCAALSVPR----VCE---NDPDSAMSINVPSSLVNWLSSFT----ENK--ENLLIHLSTDQV  131 (320)
Q Consensus        73 ~~--------~~~d~Vih~a~~~~~~----~~~---~~~~~~~~~n~~~~~~~~l~~~~----~~~--~~~~v~~Ss~~v  131 (320)
                      .+        ...|+++|+||...+.    ..+   .+++..+++|+.+++ .+.+++.    +.+  ..++|++||.+.
T Consensus        81 ~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~-~l~~~~~~~m~~~~~~~g~Iv~isS~~~  159 (259)
T d1oaaa_          81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSML-CLTSGTLNAFQDSPGLSKTVVNISSLCA  159 (259)
T ss_dssp             HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHH-HHHHHHHHTSCCCTTCEEEEEEECCGGG
T ss_pred             HHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhH-HHHHHHHHHHHhcCCCcccccccccccc
Confidence            32        2567999999875321    112   235678899999986 6666553    332  348999999877


Q ss_pred             hcccCCCCcccCCCCCcchHHHHHHHHHHHHHHHc-----CCeeEEeeccccc
Q 020880          132 YEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-----SNFAILRSSIIYG  179 (320)
Q Consensus       132 y~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~-----~~~~ilR~~~v~G  179 (320)
                      +.+.          .....|+.+|...+.+.+.+.     .++..+.||.|-.
T Consensus       160 ~~~~----------~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T  202 (259)
T d1oaaa_         160 LQPY----------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDN  202 (259)
T ss_dssp             TSCC----------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSS
T ss_pred             cCCC----------ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCC
Confidence            5432          236789999999999887653     2455677777643

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.4e-16  Score=132.40  Aligned_cols=170  Identities=19%  Similarity=0.197  Sum_probs=118.9

Q ss_pred             CcEE-EEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHH----H
Q 020880            3 KKRV-LVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         3 ~~~i-lItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      +|+| |||||++-||.+++++|+++ |   .+|+..+|+.++.+...+.+   ..++.++.+|++|.++++++++    +
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g---~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~   78 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFS---GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE   78 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSS---SEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHh
Confidence            4556 89999999999999999986 7   89999999987765544433   4578889999999999876654    4


Q ss_pred             hCCCCEEEECCCccCccccc----cCchhhhhccccccHHHHHhhhh----hccCceEEEeechhhhcccCC--------
Q 020880           74 FGQPDVVVNCAALSVPRVCE----NDPDSAMSINVPSSLVNWLSSFT----ENKENLLIHLSTDQVYEGVKS--------  137 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~--------  137 (320)
                      ++++|++||+||...+....    .+.+..+++|+.+++ .+.+++.    +.|  ++|++||.........        
T Consensus        79 ~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~lp~m~~~g--~ivnisS~~~~~~~~~~~~y~~~k  155 (275)
T d1wmaa1          79 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTR-DVCTELLPLIKPQG--RVVNVSSIMSVRALKSCSPELQQK  155 (275)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHH-HHHHHHGGGEEEEE--EEEEECCHHHHHHHHTSCHHHHHH
T ss_pred             cCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcC--Ccccccccceeccccccchhhhhh
Confidence            57899999999986543222    234567889999986 6655553    333  8999999765321100        


Q ss_pred             ----CCc-------------------ccCCCCCcchHHHHHHHHHHHHHH----H-------cCCeeEEeecccc
Q 020880          138 ----FYK-------------------EEDEIAPVNVYGKSKVAAEKFIYE----K-------CSNFAILRSSIIY  178 (320)
Q Consensus       138 ----~~~-------------------E~~~~~p~~~Y~~sK~~~e~~~~~----~-------~~~~~ilR~~~v~  178 (320)
                          ...                   ...+..|...|+.||.....+.+.    +       +..+..+.||.|-
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~  230 (275)
T d1wmaa1         156 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR  230 (275)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred             hcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeccccc
Confidence                000                   011233556899999998775543    2       2345668888773

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=1.2e-14  Score=119.42  Aligned_cols=223  Identities=15%  Similarity=0.084  Sum_probs=141.6

Q ss_pred             CCCcEEEEEcCCC--hhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh--CCCcceEEEeeCCCcccHHHHHH----
Q 020880            1 MSKKRVLVVGGTG--YLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA--LPHSFVFFDVDLKSGSGFDAVAL----   72 (320)
Q Consensus         1 m~~~~ilItGatG--~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~----   72 (320)
                      +.+|++|||||+|  -||+++++.|+++|   ++|++..|++.......+.  .......+..|+.+..+....+.    
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G---~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREG---AELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK   79 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTT---CEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhh
Confidence            4579999999999  68899999999999   8999999986544333221  13455668889998887666554    


Q ss_pred             HhCCCCEEEECCCccCccccc---------cCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcc
Q 020880           73 KFGQPDVVVNCAALSVPRVCE---------NDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKE  141 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~---------~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E  141 (320)
                      .++..|+++|+|+........         ......+.+|+.+.+ .+.+++...  +-+.+|++||.....+.      
T Consensus        80 ~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Ii~iss~~~~~~~------  152 (258)
T d1qsga_          80 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFV-AMAKACRSMLNPGSALLTLSYLGAERAI------  152 (258)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHH-HHHHHHGGGEEEEEEEEEEECGGGTSBC------
T ss_pred             cccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHH-HHHHHHHHhccCCcEEEEecchhhccCC------
Confidence            335789999999876443211         111233445555543 555544331  22368888887654321      


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccC
Q 020880          142 EDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRC  214 (320)
Q Consensus       142 ~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (320)
                          .....|+.+|...+.+.+.+.       .++-.++|+.|.-+-....   ......... .....++       .-
T Consensus       153 ----~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~---~~~~~~~~~-~~~~~pl-------~R  217 (258)
T d1qsga_         153 ----PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI---KDFRKMLAH-CEAVTPI-------RR  217 (258)
T ss_dssp             ----TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS---TTHHHHHHH-HHHHSTT-------SS
T ss_pred             ----CCcHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccccc---chhhhHHHH-HHhCCCC-------CC
Confidence                124679999999999887652       3456799999975543211   111112222 1112222       12


Q ss_pred             ceeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          215 PVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       215 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      +...+|+|.++..++.....  -..+.++.+.+|.+
T Consensus       218 ~~~peeia~~v~fL~s~~s~--~itG~~i~vDGG~~  251 (258)
T d1qsga_         218 TVTIEDVGNSAAFLCSDLSA--GISGEVVHVDGGFS  251 (258)
T ss_dssp             CCCHHHHHHHHHHHTSGGGT--TCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHhCchhc--CccCceEEECcCHH
Confidence            67799999999999865321  23355899988754

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.63  E-value=3.2e-15  Score=121.03  Aligned_cols=188  Identities=15%  Similarity=0.085  Sum_probs=123.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH----Hh--CC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KF--GQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~--~~   76 (320)
                      +|+||||||+|-||.++++.|+++|   ++|..+++.+....       .....+..|..+.+..+.+..    .+  ++
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G---~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARN---WWVASIDVVENEEA-------SASVIVKMTDSFTEQADQVTAEVGKLLGDQK   71 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSCCTTS-------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCccccc-------cccceeecccCcHHHHHHHHHHHHHHhCCCC
Confidence            6899999999999999999999999   88988877654321       122234455555544433322    22  25


Q ss_pred             CCEEEECCCccCcc-----ccccCchhhhhccccccHHHHHhhhhh--ccCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           77 PDVVVNCAALSVPR-----VCENDPDSAMSINVPSSLVNWLSSFTE--NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        77 ~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~l~~~~~--~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      +|++||+||.....     ...++++..+++|+.+++ .+.+++..  .+-.++|++||.+.+.+..          ...
T Consensus        72 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~m~~~G~Iv~isS~~~~~~~~----------~~~  140 (236)
T d1dhra_          72 VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTST-ISSHLATKHLKEGGLLTLAGAKAALDGTP----------GMI  140 (236)
T ss_dssp             EEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHH-HHHHHHHHHEEEEEEEEEECCGGGGSCCT----------TBH
T ss_pred             ceEEEECCcccccccchhcCCHHHHHHHHHHcchHHH-HHHHHHHHhcccccceeEEccHHHcCCcc----------CCc
Confidence            89999999864321     112345667899998875 55555432  1123899999988764332          266


Q ss_pred             hHHHHHHHHHHHHHHHcC---------CeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          150 VYGKSKVAAEKFIYEKCS---------NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~~---------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      .|+.||...+.+.+.+..         ++..+.|+.+.-+             +..... ...       ..-.++..+|
T Consensus       141 ~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~-------------~~~~~~-~~~-------~~~~~~~pe~  199 (236)
T d1dhra_         141 GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP-------------MNRKSM-PEA-------DFSSWTPLEF  199 (236)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH-------------HHHHHS-TTS-------CGGGSEEHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC-------------cchhhC-ccc-------hhhcCCCHHH
Confidence            899999999999988643         3355777777422             111111 111       1224688999


Q ss_pred             HHHHHHHHHhhh
Q 020880          221 VVKIILALTNRW  232 (320)
Q Consensus       221 ~a~~~~~~~~~~  232 (320)
                      +|+.+..++...
T Consensus       200 va~~~~~l~s~~  211 (236)
T d1dhra_         200 LVETFHDWITGN  211 (236)
T ss_dssp             HHHHHHHHHTTT
T ss_pred             HHHHHHHHhCCC
Confidence            999999988763

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.62  E-value=3.8e-15  Score=120.59  Aligned_cols=188  Identities=16%  Similarity=0.081  Sum_probs=121.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHH----H--HhCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVA----L--KFGQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----~--~~~~   76 (320)
                      ..|||||||+|-||.+++++|+++|   ++|++++|++....       .....+.+|..+.+......    .  ..++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G---~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNG---YTVLNIDLSANDQA-------DSNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCCTTS-------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCchhcc-------cccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            4689999999999999999999999   99999999865321       11222445555544432222    1  2357


Q ss_pred             CCEEEECCCccCcc-cc----ccCchhhhhccccccHHHHHhhhhhc--cCceEEEeechhhhcccCCCCcccCCCCCcc
Q 020880           77 PDVVVNCAALSVPR-VC----ENDPDSAMSINVPSSLVNWLSSFTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPVN  149 (320)
Q Consensus        77 ~d~Vih~a~~~~~~-~~----~~~~~~~~~~n~~~~~~~~l~~~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~  149 (320)
                      +|++||+||..... ..    .+.++..+++|+.+++ .+.+++...  +-.++|++||...+.+..          ...
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~m~~~g~Iv~isS~~~~~~~~----------~~~  140 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSA-IAAKLATTHLKPGGLLQLTGAAAAMGPTP----------SMI  140 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHH-HHHHHHHHHEEEEEEEEEECCGGGGSCCT----------TBH
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHH-HHhhhcccccccceEEEEeccHHhcCCcc----------ccc
Confidence            89999999964331 11    1234566889998875 555544331  113899999987665332          367


Q ss_pred             hHHHHHHHHHHHHHHHcCC---------eeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHH
Q 020880          150 VYGKSKVAAEKFIYEKCSN---------FAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD  220 (320)
Q Consensus       150 ~Y~~sK~~~e~~~~~~~~~---------~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  220 (320)
                      .|+.+|...+.+.+.+..+         +..+.|+.+--             .+....+. +.       ....++..+|
T Consensus       141 ~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T-------------~~~~~~~~-~~-------~~~~~~~~~~  199 (235)
T d1ooea_         141 GYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDT-------------PMNRKWMP-NA-------DHSSWTPLSF  199 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCC-------------HHHHHHST-TC-------CGGGCBCHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcC-------------cchhhhCc-CC-------ccccCCCHHH
Confidence            9999999999998876432         23467766521             12222221 11       1234788999


Q ss_pred             HHHHHHHHHhhh
Q 020880          221 VVKIILALTNRW  232 (320)
Q Consensus       221 ~a~~~~~~~~~~  232 (320)
                      +++.++.++..+
T Consensus       200 va~~~~~~l~~~  211 (235)
T d1ooea_         200 ISEHLLKWTTET  211 (235)
T ss_dssp             HHHHHHHHHHCG
T ss_pred             HHHHHHHHhcCc
Confidence            999987666554

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.5e-15  Score=124.15  Aligned_cols=194  Identities=13%  Similarity=0.076  Sum_probs=133.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh----CCCcceEEEeeCCCcccHHHHHH----H
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA----LPHSFVFFDVDLKSGSGFDAVAL----K   73 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~----~   73 (320)
                      .+|++||||||+-||.+++++|+++|   ++|++.+|+.++.+...+.    .+.....+.+|+.+.+......+    .
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G---~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   89 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMG---AHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL   89 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            46899999999999999999999999   8999999998776655432    34566778889988877655443    3


Q ss_pred             hCCCCEEEECCCccCccc----cccCchhhhhccccccHHHHHhhh----hhccCceEEEeechhhhcccCCCCcccCCC
Q 020880           74 FGQPDVVVNCAALSVPRV----CENDPDSAMSINVPSSLVNWLSSF----TENKENLLIHLSTDQVYEGVKSFYKEEDEI  145 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~l~~~----~~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~  145 (320)
                      ++..|+++|+|+......    +.++....+++|+.+++ .+.+.+    ++.+ .++|++||.+.+-+.          
T Consensus        90 ~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~-~~~~~~lp~m~~~~-G~ii~isS~~~~~~~----------  157 (269)
T d1xu9a_          90 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYV-VLTVAALPMLKQSN-GSIVVVSSLAGKVAY----------  157 (269)
T ss_dssp             HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHH-HHHHHHHHHHHHHT-CEEEEEEEGGGTSCC----------
T ss_pred             hCCccccccccccccccccccCCHHHhhhheeeehhhHH-HHHHHHHHHHHhcC-CcceEeccchhcCCC----------
Confidence            468999999998765432    22234567889999875 444444    3332 489999998865432          


Q ss_pred             CCcchHHHHHHHHHHHHHHHc---------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCce
Q 020880          146 APVNVYGKSKVAAEKFIYEKC---------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV  216 (320)
Q Consensus       146 ~p~~~Y~~sK~~~e~~~~~~~---------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  216 (320)
                      .....|+.||...+.+.+.+.         .++..+.||.|--             .+..... .+.       ......
T Consensus       158 p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T-------------~~~~~~~-~~~-------~~~~~~  216 (269)
T d1xu9a_         158 PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDT-------------ETAMKAV-SGI-------VHMQAA  216 (269)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCC-------------HHHHHHS-CGG-------GGGGCB
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCC-------------cHHHHhc-cCC-------ccccCC
Confidence            236799999999998776643         2345577877621             1222211 111       112345


Q ss_pred             eHHHHHHHHHHHHhh
Q 020880          217 YVRDVVKIILALTNR  231 (320)
Q Consensus       217 ~v~D~a~~~~~~~~~  231 (320)
                      ..+++|+.++.....
T Consensus       217 ~~e~~a~~i~~~~~~  231 (269)
T d1xu9a_         217 PKEECALEIIKGGAL  231 (269)
T ss_dssp             CHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHhhc
Confidence            678999888877665

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.60  E-value=2.1e-15  Score=124.80  Aligned_cols=230  Identities=15%  Similarity=0.110  Sum_probs=137.9

Q ss_pred             CCCcEEEEEcCCC--hhhHHHHHHHhhccCCCceEEEecCCCCCh-hhhhhhCCCcceEEEeeCCCcccHHHHHHHh---
Q 020880            1 MSKKRVLVVGGTG--YLGQHLLQGLSEIEGKPYDVAATHHSTPLP-QLLLDALPHSFVFFDVDLKSGSGFDAVALKF---   74 (320)
Q Consensus         1 m~~~~ilItGatG--~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (320)
                      |.+|++|||||+|  -||.+++++|.++|   .+|++..|++++. +.+.+..+.....+.+|+++++++..+++.+   
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~G---a~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQG---AQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTT---CEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcC---CEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhc
Confidence            5689999999766  49999999999999   8999999987664 4455556667778999999998766665432   


Q ss_pred             ----CCCCEEEECCCccCcccc------c---cCchhhhhccccccHHHHHhhhhhc-cCceEEEeechhhhcccCCCCc
Q 020880           75 ----GQPDVVVNCAALSVPRVC------E---NDPDSAMSINVPSSLVNWLSSFTEN-KENLLIHLSTDQVYEGVKSFYK  140 (320)
Q Consensus        75 ----~~~d~Vih~a~~~~~~~~------~---~~~~~~~~~n~~~~~~~~l~~~~~~-~~~~~v~~Ss~~vy~~~~~~~~  140 (320)
                          +..|+++|+|+.......      +   ......+..|+...+ .....+... +....+.++|.......     
T Consensus        81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~~~~~~~-----  154 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA-SMAKALLPIMNPGGSIVGMDFDPSRAM-----  154 (268)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHGGGEEEEEEEEEEECCCSSCC-----
T ss_pred             cccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHH-HHHHHHhhhcccccccccccccccccC-----
Confidence                457999999997532111      1   111233444554443 333333332 22244555544433221     


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCC----CCCCCC--ChHHHHHHHHhcCCceEe
Q 020880          141 EEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTI----SPVPKS--LPIQWIDSVLSKGEKVEF  207 (320)
Q Consensus       141 E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~  207 (320)
                           .....|+.+|...+.+.+.+.       .++-.+.|+.+--+...    ......  .....+........|+  
T Consensus       155 -----p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl--  227 (268)
T d2h7ma1         155 -----PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI--  227 (268)
T ss_dssp             -----TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT--
T ss_pred             -----cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCC--
Confidence                 125689999999999887643       34566889887532100    000000  0001111111111111  


Q ss_pred             ecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          208 FHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       208 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                          .+.+...+|+|+++..++.....  --.+.++.+.+|...+
T Consensus       228 ----~rr~~~p~dva~~v~fL~Sd~a~--~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         228 ----GWNMKDATPVAKTVCALLSDWLP--ATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             ----CCCTTCCHHHHHHHHHHHSSSCT--TCCSEEEEESTTGGGC
T ss_pred             ----CCCCCCHHHHHHHHHHHhCchhc--CccCCEEEECcCcccc
Confidence                23367799999999999854221  1235589998886543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.56  E-value=2.9e-13  Score=111.96  Aligned_cols=222  Identities=17%  Similarity=0.103  Sum_probs=135.1

Q ss_pred             CCCcEEEEEcCCC--hhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh--hCCCcceEEEeeCCCcccHHHHH----H
Q 020880            1 MSKKRVLVVGGTG--YLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD--ALPHSFVFFDVDLKSGSGFDAVA----L   72 (320)
Q Consensus         1 m~~~~ilItGatG--~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~----~   72 (320)
                      |.+|++|||||+|  -||.++++.|+++|   ++|++..|+++..+...+  .......++..|+++.+++.+++    +
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~G---a~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQG---ATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTT---CEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHH
Confidence            4679999999988  69999999999999   899999998653322211  12345667899999988866655    4


Q ss_pred             HhCCCCEEEECCCccCcccccc----Cchhhhhcccc----ccHHHHHhhhhh-ccCc-eEEEeechhhhcccCCCCccc
Q 020880           73 KFGQPDVVVNCAALSVPRVCEN----DPDSAMSINVP----SSLVNWLSSFTE-NKEN-LLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~~~~~~~~----~~~~~~~~n~~----~~~~~~l~~~~~-~~~~-~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                      .++.+|++||+++.........    .....+..+..    ... .......+ .+.. .++..|+.......       
T Consensus        80 ~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~~~~~~~~-------  151 (274)
T d2pd4a1          80 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLI-ELTNTLKPLLNNGASVLTLSYLGSTKYM-------  151 (274)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHH-HHHHHHGGGEEEEEEEEEEECGGGTSBC-------
T ss_pred             HcCCCCeEEeecccccccccccccccccchhhhhhhcccccccc-ccccccccccccCcceeeeccccccccc-------
Confidence            5578999999999764322111    11122222211    111 22222222 2222 45555666554432       


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                         .....|+.+|...+.+.+..       +.++-.+.|+.+.-+......    .............+.       .-+
T Consensus       152 ---~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~----~~~~~~~~~~~~~p~-------~r~  217 (274)
T d2pd4a1         152 ---AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA----DFRMILKWNEINAPL-------RKN  217 (274)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST----THHHHHHHHHHHSTT-------SSC
T ss_pred             ---ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccC----chHHHHHHHhhhhhc-------cCC
Confidence               23568999999999987754       235677999888654331111    111111111111111       235


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                      ...+|+|.++..++.....  -..+.++.+.+|.
T Consensus       218 ~~pedIA~~v~fL~S~~s~--~itG~~i~vDGG~  249 (274)
T d2pd4a1         218 VSLEEVGNAGMYLLSSLSS--GVSGEVHFVDAGY  249 (274)
T ss_dssp             CCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHhChhhC--CCcCceEEECCCh
Confidence            7899999999999875421  2235589998875

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.55  E-value=2e-13  Score=113.60  Aligned_cols=220  Identities=15%  Similarity=0.149  Sum_probs=135.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC-hhhhhh----hCCCcceEE-----------------Eee
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLD----ALPHSFVFF-----------------DVD   60 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~-~~~~~~----~~~~~~~~~-----------------~~D   60 (320)
                      |..+|||||++-||.++++.|+++|   ++|+..+|++.. .+.+.+    ..+.....+                 .+|
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~G---a~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d   78 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   78 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeeccccccccccccccccc
Confidence            4678999999999999999999999   889887776433 222221    222333333                 455


Q ss_pred             CCCcccHHHHH----HHhCCCCEEEECCCccCcccccc----Cc--------------hhhhhccccccHHHHHhhhh--
Q 020880           61 LKSGSGFDAVA----LKFGQPDVVVNCAALSVPRVCEN----DP--------------DSAMSINVPSSLVNWLSSFT--  116 (320)
Q Consensus        61 l~d~~~~~~~~----~~~~~~d~Vih~a~~~~~~~~~~----~~--------------~~~~~~n~~~~~~~~l~~~~--  116 (320)
                      +++.+++++++    +.++++|++||+||...+.....    +.              ...+.+|+.+++ .+.+++.  
T Consensus        79 v~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~  157 (284)
T d1e7wa_          79 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPY-FLIKAFAHR  157 (284)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHH-HHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeee-eeeccccch
Confidence            77777666655    45679999999999865421111    11              124667777764 4444432  


Q ss_pred             --------hccCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCC
Q 020880          117 --------ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQ  181 (320)
Q Consensus       117 --------~~~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~  181 (320)
                              +.+..++|.++|.....+.          .....|+.+|...+.+.+.+.       .++-.+.||.+--..
T Consensus       158 ~~~~~~~~~~~~~~ii~~~s~~~~~~~----------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~  227 (284)
T d1e7wa_         158 VAGTPAKHRGTNYSIINMVDAMTNQPL----------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  227 (284)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTSCC----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred             hhhhHHHhcCCCCcccccccccccCCc----------cceeeeccccccchhhhHHHHHHhCCccccccccccccccccc
Confidence                    1223367888777654322          235689999999999887653       244568887532111


Q ss_pred             CCCCCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCcC
Q 020880          182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS  252 (320)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~s  252 (320)
                             ........... ...++      ..-+...+|+|++++.++.....  -..+.++.+.+|.++|
T Consensus       228 -------~~~~~~~~~~~-~~~pl------~~R~~~peeiA~~v~fL~S~~s~--~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         228 -------DMPPAVWEGHR-SKVPL------YQRDSSAAEVSDVVIFLCSSKAK--YITGTCVKVDGGYSLT  282 (284)
T ss_dssp             -------GSCHHHHHHHH-TTCTT------TTSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTGGGC
T ss_pred             -------cCCHHHHHHHH-hcCCC------CCCCCCHHHHHHHHHHHhCchhc--CccCCeEEECcChhcc
Confidence                   11222333222 22221      11256799999999999865421  1235589998886554

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.51  E-value=2e-13  Score=110.83  Aligned_cols=208  Identities=14%  Similarity=0.156  Sum_probs=133.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH---hCCCCEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK---FGQPDVV   80 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~~d~V   80 (320)
                      |++|||||++-||++++++|+++|   ++|++.+|+++..         ....+.+|+++......+...   ....+.+
T Consensus         2 K~alITGas~GIG~aiA~~la~~G---a~V~i~~~~~~~~---------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~   69 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARG---YRVVVLDLRREGE---------DLIYVEGDVTREEDVRRAVARAQEEAPLFAV   69 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHT---CEEEEEESSCCSS---------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCcccc---------cceEeeccccchhhhHHHHHhhhccccccch
Confidence            789999999999999999999999   8999999986542         344578999987766554432   1255666


Q ss_pred             EECCCccCcc--------ccccCchhhhhccccccHHHHHhhhh----------hccCceEEEeechhhhcccCCCCccc
Q 020880           81 VNCAALSVPR--------VCENDPDSAMSINVPSSLVNWLSSFT----------ENKENLLIHLSTDQVYEGVKSFYKEE  142 (320)
Q Consensus        81 ih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~~~l~~~~----------~~~~~~~v~~Ss~~vy~~~~~~~~E~  142 (320)
                      ++.++.....        .....++..+++|+.+.+ .+...+.          +.+..++|++||...+.+..      
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~------  142 (241)
T d1uaya_          70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTF-NVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI------  142 (241)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHH-HHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT------
T ss_pred             hhhhhccccccccccccchhHHHHHHHHHHHhhhhH-HHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC------
Confidence            6666543221        111233466788887764 4443332          22334899999988764322      


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHc-------CCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEeecCcccCc
Q 020880          143 DEIAPVNVYGKSKVAAEKFIYEKC-------SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP  215 (320)
Q Consensus       143 ~~~~p~~~Y~~sK~~~e~~~~~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (320)
                          ....|+.+|...+.+.+.+.       .++-.+.||.+--+...    . .......... ...++  .    .-+
T Consensus       143 ----~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~----~-~~~~~~~~~~-~~~~~--~----~R~  206 (241)
T d1uaya_         143 ----GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQ----G-LPEKAKASLA-AQVPF--P----PRL  206 (241)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHH----T-SCHHHHHHHH-TTCCS--S----CSC
T ss_pred             ----CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccc----h-hhhhHHHHHH-hcCCC--C----CCC
Confidence                36689999999999887653       34567889888543211    0 1112222222 22221  0    124


Q ss_pred             eeHHHHHHHHHHHHhhhhccccccCceeEecCCCC
Q 020880          216 VYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR  250 (320)
Q Consensus       216 i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~  250 (320)
                      ...+|+|+++..++....    ..+.++.+.+|-.
T Consensus       207 g~pedvA~~v~fL~s~~~----iTG~~i~VDGG~~  237 (241)
T d1uaya_         207 GRPEEYAALVLHILENPM----LNGEVVRLDGALR  237 (241)
T ss_dssp             CCHHHHHHHHHHHHHCTT----CCSCEEEESTTCC
T ss_pred             cCHHHHHHHHHHHHhCCC----CCCCEEEECCccc
Confidence            679999999999987432    2345899988754

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.48  E-value=1.9e-12  Score=106.44  Aligned_cols=218  Identities=17%  Similarity=0.169  Sum_probs=130.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh-hhhh----hhCCCcceEEEeeCCCccc----HH----HH
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP-QLLL----DALPHSFVFFDVDLKSGSG----FD----AV   70 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~-~~~~----~~~~~~~~~~~~Dl~d~~~----~~----~~   70 (320)
                      ..+|||||++-||.++++.|+++|   ++|+...|+.++. +.+.    ...+.....+..|+.+...    +.    .+
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G---~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQG---FRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   78 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHH
Confidence            368999999999999999999999   8999999986543 2222    2224455556666655433    22    23


Q ss_pred             HHHhCCCCEEEECCCccCccccc---------------cCchhhhhccccccHHHHHhhhhh---------ccCceEEEe
Q 020880           71 ALKFGQPDVVVNCAALSVPRVCE---------------NDPDSAMSINVPSSLVNWLSSFTE---------NKENLLIHL  126 (320)
Q Consensus        71 ~~~~~~~d~Vih~a~~~~~~~~~---------------~~~~~~~~~n~~~~~~~~l~~~~~---------~~~~~~v~~  126 (320)
                      .+.++++|++||+||...+....               ......+..|+...+ ........         .....++.+
T Consensus        79 ~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (266)
T d1mxha_          79 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPL-FLIRAFARRQGEGGAWRSRNLSVVNL  157 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHH-HHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhCCCCEEEECCccCCCCcccccccccchhccccccccccccccccccccc-chhhhhccccccccccccccccchhh
Confidence            45667899999999976542111               011223334443332 11111111         112256666


Q ss_pred             echhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHH
Q 020880          127 STDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVL  199 (320)
Q Consensus       127 Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~  199 (320)
                      |+.......          .....|+.||...+.+.+.+       +.++..+.||.+.-+..       ........ +
T Consensus       158 ~~~~~~~~~----------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~-------~~~~~~~~-~  219 (266)
T d1mxha_         158 CDAMTDLPL----------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPA-------MPQETQEE-Y  219 (266)
T ss_dssp             CCGGGGSCC----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSS-------SCHHHHHH-H
T ss_pred             hhccccccC----------cchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecccc-------CCHHHHHH-H
Confidence            666544322          23678999999999987764       23556789998754422       11223322 2


Q ss_pred             hcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCCCc
Q 020880          200 SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV  251 (320)
Q Consensus       200 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  251 (320)
                      .+..++.      +-+...+|+|++++.++.....  -..+.++.+.+|-.+
T Consensus       220 ~~~~pl~------r~~~~peeva~~v~fL~s~~s~--~itG~~i~vDGG~~l  263 (266)
T d1mxha_         220 RRKVPLG------QSEASAAQIADAIAFLVSKDAG--YITGTTLKVDGGLIL  263 (266)
T ss_dssp             HTTCTTT------SCCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTTGGG
T ss_pred             HhcCCCC------CCCCCHHHHHHHHHHHhCchhC--CccCCeEEECccHhh
Confidence            2332221      2246799999999999976431  123458999887543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.48  E-value=4.7e-15  Score=115.97  Aligned_cols=146  Identities=11%  Similarity=0.059  Sum_probs=98.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC--CcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--HSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      ++|+|+||||+|.||+.+++.|+++|   .+|+...|+.++.....+.+.  ..+....+|+.|.+++.+++.   ++|+
T Consensus        22 ~gK~vlItGasgGIG~~ia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~iDi   95 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRSAALLAGEG---AEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK---GAHF   95 (191)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT---TCSE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhhc---cchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhc---CcCe
Confidence            57999999999999999999999999   899999999877665555432  234568899999988877765   8999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccC---ceEEEeechhhhcccCCCCcccCCCCCcchHHHHHH
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE---NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKV  156 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~  156 (320)
                      |||+||........+++...+++|+.+.. +....+.....   ......++...+|...         .+...|..+|.
T Consensus        96 lin~Ag~g~~~~~~e~~~~~~~~nv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---------~g~~~y~~sk~  165 (191)
T d1luaa1          96 VFTAGAIGLELLPQAAWQNESSIEIVADY-NAQPPLGIGGIDATDKGKEYGGKRAFGALG---------IGGLKLKLHRA  165 (191)
T ss_dssp             EEECCCTTCCCBCHHHHHTCTTCCEEEEC-CCSSSCSBTTCCTTCEEEEETTEEEECHHH---------HHHHHHHHHHH
T ss_pred             eeecCccccccCCHHHHHhhhcceeehhH-hhHHHHHHHhhhhccCcEEecceEEEeccC---------cCcHHHHHHHH
Confidence            99999875444444455666777877664 44443322221   1222222222222110         01235888888


Q ss_pred             HHHHHHH
Q 020880          157 AAEKFIY  163 (320)
Q Consensus       157 ~~e~~~~  163 (320)
                      ..+++.+
T Consensus       166 a~~~l~~  172 (191)
T d1luaa1         166 CIAKLFE  172 (191)
T ss_dssp             HHHHHTS
T ss_pred             HHHHHHh
Confidence            7776554

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.44  E-value=2.8e-12  Score=107.26  Aligned_cols=222  Identities=14%  Similarity=0.045  Sum_probs=131.7

Q ss_pred             CCcEEEEEcCCC--hhhHHHHHHHhhccCCCceEEEecCCCCChhhh-------------hhh-CCCcc-eEEEee----
Q 020880            2 SKKRVLVVGGTG--YLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL-------------LDA-LPHSF-VFFDVD----   60 (320)
Q Consensus         2 ~~~~ilItGatG--~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~-------------~~~-~~~~~-~~~~~D----   60 (320)
                      ++|++|||||+|  -||.++++.|+++|   .+|+...|++......             ... ..... .....|    
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~G---a~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAG---AEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCC---CEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            479999999987  79999999999999   8998888753211000             000 00000 111222    


Q ss_pred             ----------------CCCcccHHH----HHHHhCCCCEEEECCCccCc------cccccCchhhhhccccccHHHHHhh
Q 020880           61 ----------------LKSGSGFDA----VALKFGQPDVVVNCAALSVP------RVCENDPDSAMSINVPSSLVNWLSS  114 (320)
Q Consensus        61 ----------------l~d~~~~~~----~~~~~~~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~~~l~~  114 (320)
                                      ..+..++++    +.+.++++|++||+||....      +.+.+++...+++|+.+.+ .+.++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~-~~~~~  162 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFV-SLLSH  162 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH-HHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhh-hhhhH
Confidence                            233333333    34556799999999987431      1223345678889999886 66666


Q ss_pred             hhhccC--ceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHH--------HcCCeeEEeecccccCCCCC
Q 020880          115 FTENKE--NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE--------KCSNFAILRSSIIYGPQTIS  184 (320)
Q Consensus       115 ~~~~~~--~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~--------~~~~~~ilR~~~v~G~~~~~  184 (320)
                      +.....  .+.+.+++.......         ......|+.+|...+.+.+.        ++.++..+.||.+--+....
T Consensus       163 ~~~~~~~~g~~~~~~~~~~~~~~---------~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~  233 (297)
T d1d7oa_         163 FLPIMNPGGASISLTYIASERII---------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKA  233 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCC---------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSC
T ss_pred             HHHHhhcCCcceeeeehhhcccc---------cccccceecccccccccccccchhccccceEEecccccccccchhhhh
Confidence            654322  245666655443211         12345799999888875543        34677789999996654321


Q ss_pred             CCCCCChHHHHHHHHhcCCceEeecCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCCC
Q 020880          185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD  249 (320)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~~  249 (320)
                         ......+... ..+..|+.       .+...+|+|++++.++.....  -..+.++.+.+|.
T Consensus       234 ---~~~~~~~~~~-~~~~~Plg-------R~~~peevA~~v~fL~S~~a~--~itGq~i~vDGG~  285 (297)
T d1d7oa_         234 ---IGFIDTMIEY-SYNNAPIQ-------KTLTADEVGNAAAFLVSPLAS--AITGATIYVDNGL  285 (297)
T ss_dssp             ---CSHHHHHHHH-HHHHSSSC-------CCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTTG
T ss_pred             ---ccCCHHHHHH-HHhCCCCC-------CCCCHHHHHHHHHHHhCchhc--CCcCceEEECcCH
Confidence               1111122222 22222322       257899999999999865321  1234588888773

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.35  E-value=1e-11  Score=105.09  Aligned_cols=163  Identities=13%  Similarity=0.097  Sum_probs=104.9

Q ss_pred             CCcEEEEEc--CCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh----hC-----------CCcceEE-------
Q 020880            2 SKKRVLVVG--GTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD----AL-----------PHSFVFF-------   57 (320)
Q Consensus         2 ~~~~ilItG--atG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~----~~-----------~~~~~~~-------   57 (320)
                      +.|.+||||  ++.-||..+++.|.++|   .+|....++.........    .+           .......       
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~G---A~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRN---VKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFD   77 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCS
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcC---CEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceeh
Confidence            358899999  55689999999999999   888887765332111100    00           0001111       


Q ss_pred             -------------EeeCCCcccHHHHH----HHhCCCCEEEECCCccCc------cccccCchhhhhccccccHHHHHhh
Q 020880           58 -------------DVDLKSGSGFDAVA----LKFGQPDVVVNCAALSVP------RVCENDPDSAMSINVPSSLVNWLSS  114 (320)
Q Consensus        58 -------------~~Dl~d~~~~~~~~----~~~~~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~~~l~~  114 (320)
                                   .+|+.+.+++++++    +.++++|++||+||...+      +.+.+++...+++|+.+.+ .+.++
T Consensus        78 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~-~~~k~  156 (329)
T d1uh5a_          78 TANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLI-SLCKY  156 (329)
T ss_dssp             SGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH-HHHHH
T ss_pred             hhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHH-HHHHH
Confidence                         23666766666554    455799999999986542      1223456678889988875 66666


Q ss_pred             hhhc--cCceEEEeechhhhcccCCCCcccCCCCCcchHHHHHHHHHHHHHHH--------cCCeeEEeeccc
Q 020880          115 FTEN--KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK--------CSNFAILRSSII  177 (320)
Q Consensus       115 ~~~~--~~~~~v~~Ss~~vy~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~--------~~~~~ilR~~~v  177 (320)
                      +...  .-.++|.+||.......         +.....|+.+|...+.+.+.+        +.++-.+.||.|
T Consensus       157 ~~~~m~~~GsIv~iss~~~~~~~---------p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i  220 (329)
T d1uh5a_         157 FVNIMKPQSSIISLTYHASQKVV---------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL  220 (329)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCC---------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             HHhhcccccccccceeehhcccc---------cccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcc
Confidence            5442  12389999887764321         122457999999999877643        445667888866

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.32  E-value=2.7e-11  Score=98.93  Aligned_cols=213  Identities=12%  Similarity=0.069  Sum_probs=119.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHH-----hCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALK-----FGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~~   77 (320)
                      ||.||||||++-||.+++++|+++|   ++|++.+|++++              ...|+.+.+........     .+..
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~G---a~V~~~~~~~~~--------------~~~d~~~~~~~~~~~~~~~~~~~~~i   63 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAG---HQIVGIDIRDAE--------------VIADLSTAEGRKQAIADVLAKCSKGM   63 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSSS--------------EECCTTSHHHHHHHHHHHHTTCTTCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECChHH--------------HHHHhcCHHHHHHHHHHHHHHhCCCC
Confidence            6899999999999999999999999   899999987542              45677776654443321     1368


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHh----hhhhccCceEEEeechhhhcc--cCCCCc-----------
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLS----SFTENKENLLIHLSTDQVYEG--VKSFYK-----------  140 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~----~~~~~~~~~~v~~Ss~~vy~~--~~~~~~-----------  140 (320)
                      |+++|+|+.....   ........+|..+.. .+.+    ...+........+++.....-  ...+..           
T Consensus        64 d~lv~~Ag~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i  139 (257)
T d1fjha_          64 DGLVLCAGLGPQT---KVLGNVVSVNYFGAT-ELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKA  139 (257)
T ss_dssp             SEEEECCCCCTTC---SSHHHHHHHHTHHHH-HHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHH
T ss_pred             cEEEEcCCCCCcH---HHHHHHHHHHHHHHH-HHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEE
Confidence            9999999875332   233445556665542 3332    233333334555544332211  000000           


Q ss_pred             -----ccCCCCCcchHHHHHHHHHHHHHHH-------cCCeeEEeecccccCCCCCCCCCCChHHHHHHHHhcCCceEee
Q 020880          141 -----EEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFF  208 (320)
Q Consensus       141 -----E~~~~~p~~~Y~~sK~~~e~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (320)
                           -.....+...|+.+|...+.+.+.+       +.++-.+.||.+--+.........   .......+...|    
T Consensus       140 ~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~P----  212 (257)
T d1fjha_         140 RAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP---RYGESIAKFVPP----  212 (257)
T ss_dssp             HHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------CCCS----
T ss_pred             eeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCH---HHHHHHHhcCCC----
Confidence                 0001112346999999999988764       345677999988544221000000   011111111111    


Q ss_pred             cCcccCceeHHHHHHHHHHHHhhhhccccccCceeEecCC
Q 020880          209 HDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP  248 (320)
Q Consensus       209 ~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~n~~~~  248 (320)
                         ..-+...+|+|+++..++.....  -..+.++.+.+|
T Consensus       213 ---lgR~g~p~eva~~v~fL~S~~s~--~itG~~i~vDGG  247 (257)
T d1fjha_         213 ---MGRRAEPSEMASVIAFLMSPAAS--YVHGAQIVIDGG  247 (257)
T ss_dssp             ---TTSCCCTHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred             ---CCCCcCHHHHHHHHHHHhCchhC--CccCceEEeCCC
Confidence               12356899999999999865321  123558888776

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.39  E-value=1.7e-06  Score=62.70  Aligned_cols=116  Identities=15%  Similarity=0.021  Sum_probs=74.3

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEECC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCA   84 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~a   84 (320)
                      ||.|+||+|.+|++++-.|..+|.. -++.+.+.++.+...+.-.....+.....-+ ...+..+.++   ++|+|+.+|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~-~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~-~~~~~~~~~~---~aDivVita   76 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLV-SRLTLYDIAHTPGVAADLSHIETRATVKGYL-GPEQLPDCLK---GCDVVVIPA   76 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTC-SEEEEEESSSHHHHHHHHTTSSSSCEEEEEE-SGGGHHHHHT---TCSEEEECC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCcc-ceEEEEeccccchhhHHHhhhhhhcCCCeEE-cCCChHHHhC---CCCEEEECC
Confidence            7999999999999999999988853 5677777765433222111111111112222 2334444455   899999999


Q ss_pred             CccCccccccCchhhhhccccccHHHHHhhhhhccCce-EEEeec
Q 020880           85 ALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL-LIHLST  128 (320)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~-~v~~Ss  128 (320)
                      |....  ..++....++.|+... ..+++.+.+.+.+- ++.+|.
T Consensus        77 g~~~~--~g~sR~~ll~~N~~i~-~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          77 GVPRK--PGMTRDDLFNTNATIV-ATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             SCCCC--TTCCGGGGHHHHHHHH-HHHHHHHHHHCTTSEEEECSS
T ss_pred             CcCCC--CCCCcchHHHHHHHHH-HHHHHHHHhcCCCeEEEEecC
Confidence            96432  2346677888898776 48889998887654 444443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.36  E-value=2.5e-07  Score=66.57  Aligned_cols=73  Identities=14%  Similarity=0.211  Sum_probs=59.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+|+|.|+ |.+|+++++.|.+.|   ++|+.+.++++....+.+.+  +..++.+|.+|++.+.++--  .++|.++-+
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g---~~v~vid~d~~~~~~~~~~~--~~~vi~Gd~~~~~~l~~~~i--~~a~~vv~~   72 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKG---HDIVLIDIDKDICKKASAEI--DALVINGDCTKIKTLEDAGI--EDADMYIAV   72 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHC--SSEEEESCTTSHHHHHHTTT--TTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCC---CCcceecCChhhhhhhhhhh--hhhhccCcccchhhhhhcCh--hhhhhhccc
Confidence            68999996 999999999999999   89999999987776665543  46778999999988776532  378998875


Q ss_pred             C
Q 020880           84 A   84 (320)
Q Consensus        84 a   84 (320)
                      .
T Consensus        73 t   73 (132)
T d1lssa_          73 T   73 (132)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.30  E-value=1.2e-06  Score=63.55  Aligned_cols=101  Identities=13%  Similarity=-0.007  Sum_probs=58.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ||||.|.||||++|+.+++.|++. .+.+.+++...++........... ...  ...++.+.+    .++   ++|++|
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~-~~~--~~~~~~~~~----~~~---~~DivF   70 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGG-TTG--TLQDAFDLE----ALK---ALDIIV   70 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGT-CCC--BCEETTCHH----HHH---TCSEEE
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccC-Cce--eeecccchh----hhh---cCcEEE
Confidence            579999999999999999988865 333356666655544322211111 111  122333321    234   899999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      .+++..   .               + ..+...+.+.|+ +.+.++.++.|.
T Consensus        71 ~a~~~~---~---------------s-~~~~~~~~~~g~-~~~VID~Ss~fR  102 (146)
T d1t4ba1          71 TCQGGD---Y---------------T-NEIYPKLRESGW-QGYWIDAASSLR  102 (146)
T ss_dssp             ECSCHH---H---------------H-HHHHHHHHHTTC-CCEEEECSSTTT
T ss_pred             EecCch---H---------------H-HHhhHHHHhcCC-CeecccCCcccc
Confidence            887421   0               0 366777777776 333444444444

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.19  E-value=1.5e-06  Score=65.86  Aligned_cols=74  Identities=20%  Similarity=0.338  Sum_probs=56.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .|+|+|.|| |++|+++++.|.++|   ++|++..|+.+++..+.+.+.. ......+..+.....+.+.   ..|.++.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g---~~V~v~dr~~~~a~~l~~~~~~-~~~~~~~~~~~~~~~~~i~---~~~~~i~   73 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSG---IKVTVACRTLESAKKLSAGVQH-STPISLDVNDDAALDAEVA---KHDLVIS   73 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTT---CEEEEEESCHHHHHHHHTTCTT-EEEEECCTTCHHHHHHHHT---TSSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEECChHHHHHHHhcccc-cccccccccchhhhHhhhh---ccceeEe
Confidence            589999996 999999999999999   8999999999888887776543 3334445555555555554   6788886


Q ss_pred             CC
Q 020880           83 CA   84 (320)
Q Consensus        83 ~a   84 (320)
                      +.
T Consensus        74 ~~   75 (182)
T d1e5qa1          74 LI   75 (182)
T ss_dssp             CS
T ss_pred             ec
Confidence            54

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.18  E-value=2.4e-06  Score=62.12  Aligned_cols=109  Identities=10%  Similarity=0.068  Sum_probs=66.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh------CCCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA------LPHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      +|||.|.|+ |.+|+.++..|+.+|.. .++.+.++++++.+.....      .........+|.   ++    +.   +
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~-~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~----~~---~   72 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIA-EEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD----CK---D   72 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCC-SEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG----GT---T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCC-cEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH----hc---c
Confidence            579999995 99999999999998843 5899999886544322111      112233344443   21    23   8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEe
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHL  126 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~  126 (320)
                      +|+|+.+||....+  ..+....+..|+.-. ..+++.+.+.+.+-++.+
T Consensus        73 adivvitag~~~~~--g~~r~~l~~~N~~i~-~~~~~~i~~~~p~aiviv  119 (146)
T d1ez4a1          73 ADLVVITAGAPQKP--GESRLDLVNKNLNIL-SSIVKPVVDSGFDGIFLV  119 (146)
T ss_dssp             CSEEEECCCC------------CHHHHHHHH-HHHHHHHHHTTCCSEEEE
T ss_pred             ccEEEEecccccCC--CCCHHHHHHHHHHHH-HHHHHHHhhcCCCcEEEE
Confidence            99999999864322  234566677777655 478888887766544444

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.16  E-value=8e-06  Score=59.14  Aligned_cols=113  Identities=12%  Similarity=0.086  Sum_probs=70.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC--hhhh----hhh---CCCcceEEEeeCCCcccHHHHHHHh
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL--PQLL----LDA---LPHSFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~--~~~~----~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      |||.|.||+|.+|+.++-.|+.++.. .++.+.+++++.  .+.+    ...   .....+....--.|.+    .++  
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~-~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~----~l~--   73 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFM-KDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLR----IID--   73 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTC-CEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGG----GGT--
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcc-cccccccchhhhHhhhcccccchhcccccccCCccccCCcchHH----Hhc--
Confidence            57999999999999999999988843 478888776532  1211    111   1222232222112222    233  


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEee
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS  127 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~S  127 (320)
                       ++|+||-+||....  ..++....++.|..-. ..+++...+.+.+.++.+|
T Consensus        74 -~aDvVVitAG~~~~--~g~sR~dl~~~Na~iv-~~i~~~i~~~~~~~iivVt  122 (145)
T d1hyea1          74 -ESDVVIITSGVPRK--EGMSRMDLAKTNAKIV-GKYAKKIAEICDTKIFVIT  122 (145)
T ss_dssp             -TCSEEEECCSCCCC--TTCCHHHHHHHHHHHH-HHHHHHHHHHCCCEEEECS
T ss_pred             -cceEEEEecccccC--CCCChhhhhhhhHHHH-HHHHHHHhccCCCeEEEEc
Confidence             89999999996432  2335677788887765 3777777776654555443

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.08  E-value=1.6e-05  Score=57.48  Aligned_cols=114  Identities=15%  Similarity=0.143  Sum_probs=69.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhC---CCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDAL---PHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      |||.|+|++|.+|++++-.|..+ +.- .++...+..+ ..+.....+   ..... .. -+....... .++   +.|+
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~-~el~L~D~~~-~~~g~a~Dl~h~~~~~~-~~-~~~~~~~~~-~~~---~aDv   72 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSG-SELSLYDIAP-VTPGVAVDLSHIPTAVK-IK-GFSGEDATP-ALE---GADV   72 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTT-CEEEEECSST-THHHHHHHHHTSCSSCE-EE-EECSSCCHH-HHT---TCSE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCC-cEEEEecccc-cchhHHHHHHCCccccC-Cc-EEEcCCCcc-ccC---CCCE
Confidence            68999999999999999877644 332 6788777653 332211111   11111 11 122223333 344   8999


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      ||-+||...-  ..++..+.+..|.... ..+.+.+.+...+ .+|.+|.
T Consensus        73 vvitaG~~~k--~g~~R~dl~~~N~~i~-~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          73 VLISAGVRRK--PGMDRSDLFNVNAGIV-KNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             EEECCSCCCC--TTCCGGGGHHHHHHHH-HHHHHHHHHHCTTSEEEECSS
T ss_pred             EEECCCccCC--CCcchhhHHHHHHHHH-HHHHHHHHhhCCCcEEEEccC
Confidence            9999997432  2346677788887665 4788888777644 4555554

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.01  E-value=6.7e-06  Score=62.38  Aligned_cols=104  Identities=16%  Similarity=0.081  Sum_probs=73.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +.+|||+||+|-+|+..++.....|   .+|+++.+++++.+.... ++..   ...|..+.+..+.+.+..  .++|+|
T Consensus        30 G~~VlV~ga~ggvG~~aiqlak~~G---a~vi~~~~~~~~~~~~~~-~Ga~---~vi~~~~~~~~~~~~~~~~~~Gvd~v  102 (182)
T d1v3va2          30 GETVLVSAAAGAVGSVVGQIAKLKG---CKVVGAAGSDEKIAYLKQ-IGFD---AAFNYKTVNSLEEALKKASPDGYDCY  102 (182)
T ss_dssp             SCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHH-TTCS---EEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEEeCCCchhHHHHHHHHccC---CEEEEeCCCHHHHHHHHh-hhhh---hhcccccccHHHHHHHHhhcCCCcee
Confidence            5799999999999999999999999   899999998765544433 3322   234666666555554433  369999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhcc
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG  134 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~  134 (320)
                      |++.|..           .        +...++.++..|  +++.++....|+.
T Consensus       103 ~D~vG~~-----------~--------~~~~~~~l~~~G--~~v~~G~~~~~~~  135 (182)
T d1v3va2         103 FDNVGGE-----------F--------LNTVLSQMKDFG--KIAICGAISVYNR  135 (182)
T ss_dssp             EESSCHH-----------H--------HHHHGGGEEEEE--EEEECCCGGGTTC
T ss_pred             EEecCch-----------h--------hhhhhhhccCCC--eEEeecceeeccc
Confidence            9998631           0        125566666666  7888887776653

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.98  E-value=3.1e-06  Score=61.45  Aligned_cols=98  Identities=21%  Similarity=0.046  Sum_probs=58.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .|+|.|.||||++|+.|++.|.+++|...++..+..+.+..+..... ..  .....++.+ +    .+.   ++|++|-
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~-~~--~~~~~~~~~-~----~~~---~~d~vf~   70 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA-ES--SLRVGDVDS-F----DFS---SVGLAFF   70 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET-TE--EEECEEGGG-C----CGG---GCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeec-cc--cchhccchh-h----hhc---cceEEEe
Confidence            47899999999999999998876665547777665544333222111 01  111122211 1    122   7899997


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV  131 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~v  131 (320)
                      +++..   .               + ..+...+.+.|+ ++|=.||..-
T Consensus        71 a~p~~---~---------------s-~~~~~~~~~~g~-~VID~Ss~fR   99 (144)
T d2hjsa1          71 AAAAE---V---------------S-RAHAERARAAGC-SVIDLSGALE   99 (144)
T ss_dssp             CSCHH---H---------------H-HHHHHHHHHTTC-EEEETTCTTT
T ss_pred             cCCcc---h---------------h-hhhccccccCCc-eEEeechhhc
Confidence            76421   0               0 256666667776 7777777654

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.93  E-value=9.9e-06  Score=61.40  Aligned_cols=101  Identities=23%  Similarity=0.161  Sum_probs=69.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +.+|||+||+|-+|...++.+...|   .+|+++++++++.+.+ ...+  .. ...|..+++..+++.+..  .++|+|
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g---~~vi~~~~~~~~~~~l-~~~G--a~-~vi~~~~~~~~~~v~~~t~~~g~d~v   98 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIG---ARIYTTAGSDAKREML-SRLG--VE-YVGDSRSVDFADEILELTDGYGVDVV   98 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHT---CEEEEEESSHHHHHHH-HTTC--CS-EEEETTCSTHHHHHHHHTTTCCEEEE
T ss_pred             CCEEEEECCCCCcccccchhhcccc---ccceeeeccccccccc-cccc--cc-ccccCCccCHHHHHHHHhCCCCEEEE
Confidence            4689999999999999999999999   8999999886655443 3333  22 335666765555554433  369999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhh
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV  131 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~v  131 (320)
                      |.+.|..           .        +...++.++..|  ++|.++....
T Consensus        99 ~d~~g~~-----------~--------~~~~~~~l~~~G--~~v~~G~~~~  128 (183)
T d1pqwa_          99 LNSLAGE-----------A--------IQRGVQILAPGG--RFIELGKKDV  128 (183)
T ss_dssp             EECCCTH-----------H--------HHHHHHTEEEEE--EEEECSCGGG
T ss_pred             Eecccch-----------H--------HHHHHHHhcCCC--EEEEEccCCC
Confidence            9998621           0        125566666665  8888865543

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=8.8e-06  Score=61.18  Aligned_cols=98  Identities=15%  Similarity=0.084  Sum_probs=67.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +.+|||+||+|-+|...++.+...|   .+|+++++++++.+.. ..++.  . ...|.++.+..+++.+..  .++|+|
T Consensus        29 g~~VlV~Ga~G~vG~~aiq~a~~~G---~~vi~~~~~~~~~~~~-~~~Ga--~-~vi~~~~~~~~~~i~~~t~~~g~d~v  101 (174)
T d1yb5a2          29 GESVLVHGASGGVGLAACQIARAYG---LKILGTAGTEEGQKIV-LQNGA--H-EVFNHREVNYIDKIKKYVGEKGIDII  101 (174)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHH-HHTTC--S-EEEETTSTTHHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEEeccccccccccccccccC---cccccccccccccccc-cccCc--c-cccccccccHHHHhhhhhccCCceEE
Confidence            5689999999999999999999999   8999999876544333 33432  2 234777766555444333  258999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      |++.|..           .        +...++.++..|  ++|.++.
T Consensus       102 ~d~~g~~-----------~--------~~~~~~~l~~~G--~iv~~G~  128 (174)
T d1yb5a2         102 IEMLANV-----------N--------LSKDLSLLSHGG--RVIVVGS  128 (174)
T ss_dssp             EESCHHH-----------H--------HHHHHHHEEEEE--EEEECCC
T ss_pred             eecccHH-----------H--------HHHHHhccCCCC--EEEEEec
Confidence            9987621           0        135566666666  8888763

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.87  E-value=3.4e-05  Score=56.06  Aligned_cols=111  Identities=15%  Similarity=0.173  Sum_probs=70.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-------CCcceEEEeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-------PHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      .+||.|.|| |.+|++++..|+.+|.. .++.+.++.++.++.....+       ...+.....|   .+.    +.   
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~-~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~~~----l~---   73 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIA-DEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---YDD----CR---   73 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCC-SEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---GGG----TT---
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCC-ceEEEEeeccccccchhccHhhCccccCCCeEEEECC---HHH----hc---
Confidence            468999996 99999999999998853 57888888765533222111       1223322222   221    33   


Q ss_pred             CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      ++|+|+.+||....+  .....+.+..|..-. ..+++...+.+.+ .+|.+|.
T Consensus        74 daDvvvitag~~~~~--~~~R~dl~~~N~~i~-~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          74 DADLVVICAGANQKP--GETRLDLVDKNIAIF-RSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             TCSEEEECCSCCCCT--TTCSGGGHHHHHHHH-HHHHHHHHHHTCCSEEEECSS
T ss_pred             cceeEEEeccccccc--CcchhHHHHHHHHHH-HHHHHHHHhhCCCceEEEecC
Confidence            899999999875322  334566777786655 3677777766543 4555553

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.86  E-value=3.3e-05  Score=57.65  Aligned_cols=75  Identities=20%  Similarity=0.229  Sum_probs=45.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |+||.|.|||||+|+.|++.|.+.-+  +++..+..+....+.+.+..+....  ..++.. .+..+..+   ++|+||-
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~--~ei~~l~s~~~aG~~i~~~~p~~~~--~~~~~~-~~~~~~~~---~~dvvf~   72 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPE--AKITYLSSRTYAGKKLEEIFPSTLE--NSILSE-FDPEKVSK---NCDVLFT   72 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTT--EEEEEEECSTTTTSBHHHHCGGGCC--CCBCBC-CCHHHHHH---HCSEEEE
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCC--ceEEEeeccccCCCcccccCchhhc--cccccc-cCHhHhcc---ccceEEE
Confidence            68999999999999999998875432  7777665554444333332221111  111211 12333444   7899997


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +..
T Consensus        73 a~p   75 (176)
T d1vkna1          73 ALP   75 (176)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            764

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.85  E-value=1.3e-05  Score=59.08  Aligned_cols=73  Identities=23%  Similarity=0.202  Sum_probs=55.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ++++|||.|+ |-+|+.+++.|...|.  .+++...|+.+++..+...++.  +     ..+.+++.+.+.   ++|+||
T Consensus        23 ~~~~ilviGa-G~~g~~v~~~L~~~g~--~~i~v~nRt~~ka~~l~~~~~~--~-----~~~~~~~~~~l~---~~Divi   89 (159)
T d1gpja2          23 HDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTYERAVELARDLGG--E-----AVRFDELVDHLA---RSDVVV   89 (159)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSHHHHHHHHHHHTC--E-----ECCGGGHHHHHH---TCSEEE
T ss_pred             ccCeEEEECC-CHHHHHHHHHHHhcCC--cEEEEEcCcHHHHHHHHHhhhc--c-----cccchhHHHHhc---cCCEEE
Confidence            4789999996 9999999999999993  3688889988887777776532  1     123345666666   899999


Q ss_pred             ECCCcc
Q 020880           82 NCAALS   87 (320)
Q Consensus        82 h~a~~~   87 (320)
                      .+.+..
T Consensus        90 ~atss~   95 (159)
T d1gpja2          90 SATAAP   95 (159)
T ss_dssp             ECCSSS
T ss_pred             EecCCC
Confidence            998743

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.81  E-value=5.2e-06  Score=62.79  Aligned_cols=32  Identities=25%  Similarity=0.433  Sum_probs=26.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEe
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT   36 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~   36 (320)
                      |+||.|.|||||+|+.|++.|.+.-+  +++..+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~--~ei~~l   32 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPH--MTITAL   32 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTT--EEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCC--CceEee
Confidence            68999999999999999998887532  776544

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.80  E-value=5.4e-06  Score=63.71  Aligned_cols=43  Identities=23%  Similarity=0.353  Sum_probs=37.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA   49 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~   49 (320)
                      |||.|+||+|-+|++|++.|.++|   ++|....|++++...+.+.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G---~~V~l~~R~~e~~~~l~~~   43 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHH
Confidence            579999999999999999999999   8999999998776655443

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.80  E-value=1.3e-05  Score=57.37  Aligned_cols=72  Identities=13%  Similarity=0.152  Sum_probs=56.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |+++|.| .|-+|+++++.|.++|   ++|++...+++..+.+.+   .....+.+|.++++.+.++--  .++|.||-+
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g---~~vvvid~d~~~~~~~~~---~~~~~~~gd~~~~~~l~~a~i--~~a~~vi~~   71 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMG---HEVLAVDINEEKVNAYAS---YATHAVIANATEENELLSLGI--RNFEYVIVA   71 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTT---CCCEEEESCHHHHHHTTT---TCSEEEECCTTCTTHHHHHTG--GGCSEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCC---CeEEEecCcHHHHHHHHH---hCCcceeeecccchhhhccCC--ccccEEEEE
Confidence            5788998 5999999999999999   788888888766665543   245668899999998876521  378988865


Q ss_pred             C
Q 020880           84 A   84 (320)
Q Consensus        84 a   84 (320)
                      .
T Consensus        72 ~   72 (134)
T d2hmva1          72 I   72 (134)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.79  E-value=3.3e-05  Score=55.67  Aligned_cols=111  Identities=11%  Similarity=0.079  Sum_probs=67.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC------CcceEEEeeCCCcccHHHHHHHhCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP------HSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      ++||.|.|+ |.+|+.++-.|+.++.- .++.+.+++++..+.....+.      .......+   +.+    .+   .+
T Consensus         1 r~KI~IIGa-G~VG~~~a~~l~~~~l~-~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~----~~---~~   68 (142)
T d1y6ja1           1 RSKVAIIGA-GFVGASAAFTMALRQTA-NELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS----DV---KD   68 (142)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCS-SEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG----GG---TT
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCC-CEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH----Hh---CC
Confidence            368999996 99999999999998853 579999988766433322221      11121111   222    12   38


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      +|+|+-+||....+  ..+....+..|+.-. ..+++.+.+.+.+ .+|.+|.
T Consensus        69 adivvitag~~~~~--~~~r~~l~~~N~~i~-~~i~~~i~~~~p~ai~ivvtN  118 (142)
T d1y6ja1          69 CDVIVVTAGANRKP--GETRLDLAKKNVMIA-KEVTQNIMKYYNHGVILVVSN  118 (142)
T ss_dssp             CSEEEECCCC--------CHHHHHHHHHHHH-HHHHHHHHHHCCSCEEEECSS
T ss_pred             CceEEEecccccCc--CcchhHHhhHHHHHH-HHHHHHhhccCCCceEEEecC
Confidence            99999999865322  345667788887765 3788888877654 3454443

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.79  E-value=3.7e-05  Score=55.43  Aligned_cols=100  Identities=17%  Similarity=0.063  Sum_probs=56.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhc-cCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      |||.|.|||||+|+.|++.|++. .|...++..+..+....+. .. +..... ...+..+.    +.++   ++|+||.
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~-~~-~~~~~~-~~~~~~~~----~~~~---~~DvvF~   70 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA-PN-FGKDAG-MLHDAFDI----ESLK---QLDAVIT   70 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC-CC-SSSCCC-BCEETTCH----HHHT---TCSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc-cc-cCCcce-eeecccch----hhhc---cccEEEE
Confidence            57999999999999999988864 3443566554444322211 11 111111 11122221    2233   8999998


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeechhhh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLSTDQVY  132 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss~~vy  132 (320)
                      |....   .+                ..+...+.+.|.+ .+|=.||..=+
T Consensus        71 alp~~---~s----------------~~~~~~l~~~g~~~~VIDlSsdfR~  102 (147)
T d1mb4a1          71 CQGGS---YT----------------EKVYPALRQAGWKGYWIDAASTLRM  102 (147)
T ss_dssp             CSCHH---HH----------------HHHHHHHHHTTCCSEEEESSSTTTT
T ss_pred             ecCch---HH----------------HHHhHHHHHcCCceEEEeCCccccc
Confidence            86421   00                3667777777764 46666766543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.79  E-value=8.3e-06  Score=59.92  Aligned_cols=118  Identities=14%  Similarity=0.075  Sum_probs=65.6

Q ss_pred             CCC-cEEEEEcCCChhhHHHHHHHhhccCC----CceEEEe--cCCCCChhhhhhhC----CCcceEEEeeCCCcccHHH
Q 020880            1 MSK-KRVLVVGGTGYLGQHLLQGLSEIEGK----PYDVAAT--HHSTPLPQLLLDAL----PHSFVFFDVDLKSGSGFDA   69 (320)
Q Consensus         1 m~~-~~ilItGatG~IG~~l~~~L~~~g~~----v~~v~~~--~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~   69 (320)
                      |+. +||.|+||+|++|++++-.|...+.-    ......+  .+..+.........    ......+...-    ...+
T Consensus         1 m~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~   76 (154)
T d1y7ta1           1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATD----DPKV   76 (154)
T ss_dssp             CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES----CHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCC----chhh
Confidence            553 59999999999999999999876521    0111222  22222221111111    11222222221    1223


Q ss_pred             HHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhcc-Cc-eEEEeec
Q 020880           70 VALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK-EN-LLIHLST  128 (320)
Q Consensus        70 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~-~~-~~v~~Ss  128 (320)
                      .++   +.|+||-+||....  ...+..+.+..|+.-. ..+.+.+.+.. .. .++.+|.
T Consensus        77 ~~~---~advViitaG~~~~--pg~~r~dl~~~N~~i~-~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          77 AFK---DADYALLVGAAPRK--AGMERRDLLQVNGKIF-TEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             HTT---TCSEEEECCCCCCC--TTCCHHHHHHHHHHHH-HHHHHHHHHHSCTTCEEEECSS
T ss_pred             hcc---cccEEEeecCcCCC--CCCcHHHHHHHHHHHH-HHHHHHHHHhCCCCcEEEEecC
Confidence            344   89999999987532  3345677788887665 37777776643 22 4555664

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.79  E-value=3.7e-05  Score=57.45  Aligned_cols=94  Identities=19%  Similarity=0.191  Sum_probs=62.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +++|||+||+|-+|+..++.+...|   .+|++.++++++.+...+ ++..   ...|..+   .......-.++|+||+
T Consensus        28 g~~VlI~ga~G~vG~~aiqlak~~G---~~vi~~~~~~~~~~~~~~-lGa~---~~i~~~~---~~~~~~~~~g~D~v~d   97 (171)
T d1iz0a2          28 GEKVLVQAAAGALGTAAVQVARAMG---LRVLAAASRPEKLALPLA-LGAE---EAATYAE---VPERAKAWGGLDLVLE   97 (171)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSGGGSHHHHH-TTCS---EEEEGGG---HHHHHHHTTSEEEEEE
T ss_pred             CCEEEEEeccccchhhhhhhhcccc---cccccccccccccccccc-cccc---eeeehhh---hhhhhhcccccccccc
Confidence            5689999999999999999999999   899999988766554433 3322   1224332   2223333358999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      +.|..                    +...++.++..|  ++|.++.
T Consensus        98 ~~G~~--------------------~~~~~~~l~~~G--~~v~~G~  121 (171)
T d1iz0a2          98 VRGKE--------------------VEESLGLLAHGG--RLVYIGA  121 (171)
T ss_dssp             CSCTT--------------------HHHHHTTEEEEE--EEEEC--
T ss_pred             ccchh--------------------HHHHHHHHhcCC--cEEEEeC
Confidence            87621                    024556666666  7888764

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.78  E-value=2e-05  Score=57.66  Aligned_cols=113  Identities=16%  Similarity=0.126  Sum_probs=72.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-------CCcceEEEeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-------PHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      ++||.|.|+ |.+|+.++..|..++.  .++.+.+.+++..+.....+       +.... +.+.    ...++.++   
T Consensus         7 ~~KI~IIGa-G~VG~~lA~~l~~~~~--~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~-~~~~----~~~~~~~~---   75 (154)
T d1pzga1           7 RKKVAMIGS-GMIGGTMGYLCALREL--ADVVLYDVVKGMPEGKALDLSHVTSVVDTNVS-VRAE----YSYEAALT---   75 (154)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSSHHHHHHHHHHHHHHHTTCCCC-EEEE----CSHHHHHT---
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCC--ceEEEEEeccccchhHHHHHhhhccccCCeeE-Eecc----Cchhhhhc---
Confidence            569999997 9999999988888774  58888888876654433222       11111 1111    12334455   


Q ss_pred             CCCEEEECCCccCcc---ccccCchhhhhccccccHHHHHhhhhhccCceEEEee
Q 020880           76 QPDVVVNCAALSVPR---VCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS  127 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~S  127 (320)
                      ++|+|+-+||....+   ....+....+..|..-. ..+++.+.+.+.+-++.+-
T Consensus        76 ~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv-~~i~~~i~~~~p~aiviiv  129 (154)
T d1pzga1          76 GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKII-REIGQNIKKYCPKTFIIVV  129 (154)
T ss_dssp             TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHH-HHHHHHHHHHCTTCEEEEC
T ss_pred             CCCeEEEecccccCCCCCCcccchhhhhhhhHHHH-HHHHHHHHhcCCCcEEEEe
Confidence            899999999875322   12235566777787665 3788888877765444443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.76  E-value=6.6e-05  Score=53.86  Aligned_cols=110  Identities=17%  Similarity=0.072  Sum_probs=70.1

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC--CChhh----hhh--hCCCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST--PLPQL----LLD--ALPHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~--~~~~~----~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      ||.|+||+|.+|++++-.|+.++.. -++.+.+...  +..+.    +..  .+.........|   .++    +.   +
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~-~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~----~~---~   70 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIA-DEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YED----TA---G   70 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCC-SEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GGG----GT---T
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCC-CEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HHH----hh---h
Confidence            7999999999999999999998853 4677776532  22211    111  122333333333   222    22   8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      +|+|+-+||....  ..++..+.++.|..-. ..+.+...+.+.+ .++.+|.
T Consensus        71 aDiVvitaG~~~~--~g~~R~dl~~~N~~I~-~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          71 SDVVVITAGIPRQ--PGQTRIDLAGDNAPIM-EDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             CSEEEECCCCCCC--TTCCHHHHHHHHHHHH-HHHHHHHHTTCSCCEEEECCS
T ss_pred             cCEEEEecccccc--cCCchhhHHHHHHHHH-HHHHHHHHhcCCCceEEEecC
Confidence            9999999986432  2346678888888765 4788888777654 4444543

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.74  E-value=0.00026  Score=51.48  Aligned_cols=41  Identities=20%  Similarity=0.269  Sum_probs=35.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL   46 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~   46 (320)
                      |+||.|.||.|.+|+.+++.|.++|   |+|.+.+|+.......
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G---~~V~~~d~~~~~~~~~   49 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASG---YPISILDREDWAVAES   49 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTT---CCEEEECTTCGGGHHH
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcC---CCcEecccccccccch
Confidence            6899999999999999999999999   8899999987654443

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.70  E-value=4.6e-05  Score=57.34  Aligned_cols=100  Identities=12%  Similarity=0.086  Sum_probs=69.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +.+|+|+||+|-+|..+++.+...|   .+|++.++++++.+...+. +.  . ...|.++++..+++.+..  .++|+|
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~G---a~Vi~~~~s~~k~~~~~~l-Ga--~-~vi~~~~~d~~~~v~~~t~g~g~d~v  101 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALG---AKLIGTVGTAQKAQSALKA-GA--W-QVINYREEDLVERLKEITGGKKVRVV  101 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHT---CEEEEEESSHHHHHHHHHH-TC--S-EEEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred             CCEEEEEccccccchHHHHHHHHhC---CeEeecccchHHHHHHHhc-CC--e-EEEECCCCCHHHHHHHHhCCCCeEEE
Confidence            5699999999999999999999999   8999999998776555443 32  2 345777766555544332  268999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      +.+.+...                   +...++.++..|  +++..+...
T Consensus       102 ~d~~g~~~-------------------~~~~~~~l~~~G--~~v~~g~~~  130 (179)
T d1qora2         102 YDSVGRDT-------------------WERSLDCLQRRG--LMVSFGNSS  130 (179)
T ss_dssp             EECSCGGG-------------------HHHHHHTEEEEE--EEEECCCTT
T ss_pred             EeCccHHH-------------------HHHHHHHHhcCC--eeeeccccc
Confidence            99886310                   125555556666  677665543

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.69  E-value=4.5e-05  Score=55.89  Aligned_cols=114  Identities=14%  Similarity=0.038  Sum_probs=70.7

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC------CCcceEEEeeCCCcccHHHHHHHh
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL------PHSFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      |++.||.|.|+ |.+|++++-.|+.+|.. .++.+.+++++.+......+      ......+..  .|.+.    +.  
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~-~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~--~d~~~----~~--   86 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLA-DELALVDADTDKLRGEALDLQHGSLFLSTPKIVFG--KDYNV----SA--   86 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSC-SEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEE--SSGGG----GT--
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCC-CEEEEEeCCchhhhccHHHHhCcchhcCCCeEEec--cchhh----hc--
Confidence            44668999995 99999999999998854 57888888765543222111      111121221  22221    22  


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                       ++|+||-+||....+  .++....++.|+.-. ..++....+.+.+ .++.+|.
T Consensus        87 -~adivvitag~~~~~--~~~R~dll~~N~~i~-~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          87 -NSKLVIITAGARMVS--GQTRLDLLQRNVAIM-KAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             -TEEEEEECCSCCCCT--TTCSSCTTHHHHHHH-HHHTTTHHHHSTTCEEEECSS
T ss_pred             -cccEEEEecccccCC--CCCHHHHHHHHHHHH-HHHHHHHhccCCCeEEEEeCC
Confidence             899999999875332  345566677787655 3677777666543 4555554

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.67  E-value=7.2e-05  Score=53.69  Aligned_cols=108  Identities=9%  Similarity=0.008  Sum_probs=68.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh------CCCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA------LPHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      |||.|.|+ |.+|+.++-.|+.++.. .++.+.++++++.+.....      +.........   |.++    ++   ++
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~-~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~---~~~~----~~---~a   68 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFA-REMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---DYAD----LK---GS   68 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCC-SEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---CGGG----GT---TC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCC-CEEEEEecccccccchhccccccccccccccccCC---cHHH----hc---CC
Confidence            68999996 99999999999888754 5788888876554332221      1122232222   2221    33   89


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEe
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHL  126 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~  126 (320)
                      |+|+-+||....+  .....+.+..|..-. ..+++...+.+.+-++.+
T Consensus        69 divvitag~~~~~--g~~r~dl~~~N~~I~-~~i~~~i~~~~p~aiviv  114 (140)
T d1a5za1          69 DVVIVAAGVPQKP--GETRLQLLGRNARVM-KEIARNVSKYAPDSIVIV  114 (140)
T ss_dssp             SEEEECCCCCCCS--SCCHHHHHHHHHHHH-HHHHHHHHHHCTTCEEEE
T ss_pred             CEEEEecccccCC--CcchhhhhccccchH-HHHHHHHHhcCCCcEEEE
Confidence            9999999875332  234566677776554 377777777665444443

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.67  E-value=0.00014  Score=52.32  Aligned_cols=110  Identities=15%  Similarity=0.132  Sum_probs=69.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-------CCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-------PHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      |||.|+|| |.+|+.++..|+.++.. .++.+.+++++..+.....+       .....+...  .|.+.    +.   +
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~-~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~----~~---d   69 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLA-RELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD----TA---N   69 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCC-SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG----GT---T
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCC-ceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH----hc---C
Confidence            57999996 99999999999988743 58999998877654332111       122222211  23222    33   8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEee
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLS  127 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~S  127 (320)
                      +|+|+-+||....  ...+....++.|..-. ..+++.+.+...+ .++.+|
T Consensus        70 advvvitag~~~~--~g~~r~~l~~~N~~i~-~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          70 SDIVIITAGLPRK--PGMTREDLLMKNAGIV-KEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             CSEEEECCSCCCC--TTCCHHHHHHHHHHHH-HHHHHHHHHHCSSCEEEECC
T ss_pred             CeEEEEEEecCCC--CCCchHHHHHHHHHHH-HHHHHHhhccCCCeEEEEec
Confidence            9999999986432  2234566677777665 3777777776544 344444

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.65  E-value=4.9e-05  Score=56.91  Aligned_cols=98  Identities=16%  Similarity=0.066  Sum_probs=64.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      ..+|||+||+|-+|+..++.....|   .+|+++++++++.+...+ ++..   ...|..+.  ..+.....  +++|+|
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~G---a~Viat~~s~~k~~~~~~-lGa~---~vi~~~~~--~~~~~~~~~~~gvD~v  102 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRG---YTVEASTGKAAEHDYLRV-LGAK---EVLAREDV--MAERIRPLDKQRWAAA  102 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCTTCHHHHHH-TTCS---EEEECC-----------CCSCCEEEE
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcC---CceEEecCchHHHHHHHh-cccc---eeeecchh--HHHHHHHhhccCcCEE
Confidence            3579999999999999999999999   899999999887665544 3322   12233221  22222222  379999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      |.+.|-...                   ...++.++..|  |+|.++...
T Consensus       103 id~vgg~~~-------------------~~~l~~l~~~G--riv~~G~~~  131 (176)
T d1xa0a2         103 VDPVGGRTL-------------------ATVLSRMRYGG--AVAVSGLTG  131 (176)
T ss_dssp             EECSTTTTH-------------------HHHHHTEEEEE--EEEECSCCS
T ss_pred             EEcCCchhH-------------------HHHHHHhCCCc--eEEEeeccc
Confidence            998773211                   35666666666  888887764

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.63  E-value=6.7e-05  Score=54.21  Aligned_cols=111  Identities=12%  Similarity=0.053  Sum_probs=66.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-------CCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-------PHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      |||.|+|+ |.+|+.++-.|+.+|.. .++.+.++++++.+.....+       ........   .|.++    ++   +
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~-~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~---~d~~~----l~---~   69 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVA-DDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWAA----LA---D   69 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCC-SEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGGG----GT---T
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCC-ceEEEEecccchhhhHHHhhhccccccCCccceec---cCHHH----hc---c
Confidence            78999995 99999999999988843 57888888765543222111       12222222   23322    23   8


Q ss_pred             CCEEEECCCccCccc--cccCchhhhhccccccHHHHHhhhhhccCc-eEEEee
Q 020880           77 PDVVVNCAALSVPRV--CENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLS  127 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~--~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~S  127 (320)
                      +|+||-+||......  ...+....++.|..-. ..+.+..++.+.+ .+|.+|
T Consensus        70 adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~-~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          70 ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMV-QSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             CSEEEECCSCGGGTC-------CTTHHHHHHHH-HHHHHHHHHTTCCSEEEECS
T ss_pred             ccEEEEeccccccccccCCccHHHHHHHHHHHH-HHHHHHHhhcCCCeEEEEec
Confidence            999999998643211  1123345566676554 3777777776654 344444

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.61  E-value=0.00011  Score=54.77  Aligned_cols=108  Identities=13%  Similarity=0.175  Sum_probs=66.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+|+|.|+ |-.+++++..|.+.|   .+|+...|+.++.+.+.+.+.........+..+.+      .  ..+|+||
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g---~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~~------~--~~~dliI   84 (170)
T d1nyta1          17 PGLRILLIGA-GGASRGVLLPLLSLD---CAVTITNRTVSRAEELAKLFAHTGSIQALSMDELE------G--HEFDLII   84 (170)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGT------T--CCCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHhcccc---eEEEeccchHHHHHHHHHHHhhccccccccccccc------c--cccceee
Confidence            3689999995 777999999999999   78999999988887777665433222222322211      1  3789999


Q ss_pred             ECCCccCccccccCch-------hhhhccccccHHHHHhhhhhccCc
Q 020880           82 NCAALSVPRVCENDPD-------SAMSINVPSSLVNWLSSFTENKEN  121 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~-------~~~~~n~~~~~~~~l~~~~~~~~~  121 (320)
                      |+......+.....+.       ..+++...-....+++.|++.|++
T Consensus        85 N~Tp~G~~~~~~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~  131 (170)
T d1nyta1          85 NATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSK  131 (170)
T ss_dssp             ECCSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCCHHHHHHHHTTCC
T ss_pred             cccccCcccCCCCCcHHHhccCcEEEEeecCCCCCHHHHHHHHcCCC
Confidence            9976542211111111       112332221112678888888763

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.61  E-value=0.00043  Score=51.95  Aligned_cols=79  Identities=13%  Similarity=0.112  Sum_probs=57.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh---hCC--CcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD---ALP--HSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~---~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      .++|+|+|+ |-.|+.++..|.+.|.  ..++...|+++..++...   .+.  ........|+.+.+.+.+...   .+
T Consensus        18 ~k~vlIlGa-GGaarai~~al~~~g~--~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~   91 (182)
T d1vi2a1          18 GKTMVLLGA-GGASTAIGAQGAIEGL--KEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA---SA   91 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---TC
T ss_pred             CCEEEEECC-cHHHHHHHHHHhhcCC--ceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc---cc
Confidence            589999995 8889999999999884  478888898776654332   111  123345678888777766665   89


Q ss_pred             CEEEECCCcc
Q 020880           78 DVVVNCAALS   87 (320)
Q Consensus        78 d~Vih~a~~~   87 (320)
                      |+|||+....
T Consensus        92 diiIN~Tp~G  101 (182)
T d1vi2a1          92 DILTNGTKVG  101 (182)
T ss_dssp             SEEEECSSTT
T ss_pred             ceeccccCCc
Confidence            9999997653

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.60  E-value=7e-05  Score=55.48  Aligned_cols=38  Identities=24%  Similarity=0.208  Sum_probs=33.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhh
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL   45 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~   45 (320)
                      |||+|.|+ |-||+.++..|.+.|   ++|.+..|++.....
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G---~~V~~~~r~~~~~~~   38 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQG---HEVQGWLRVPQPYCS   38 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSCCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCC---CceEEEEcCHHHhhh
Confidence            68999996 999999999999999   899999999776544

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.58  E-value=0.00014  Score=53.24  Aligned_cols=112  Identities=14%  Similarity=0.055  Sum_probs=71.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC------CCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL------PHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      .+||.|.|+ |.+|+.++-.|..+|.. -++.+.+++++..+.....+      ..... +. --.|.+.    +   .+
T Consensus        20 ~~KV~IIGa-G~VG~~~A~~l~~~~l~-~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~-~~-~~~d~~~----~---~~   88 (160)
T d1i0za1          20 NNKITVVGV-GQVGMACAISILGKSLA-DELALVDVLEDKLKGEMMDLQHGSLFLQTPK-IV-ADKDYSV----T---AN   88 (160)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCC-SEEEEECSCHHHHHHHHHHHHHTGGGCCCSE-EE-ECSSGGG----G---TT
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCC-cEEEEEEeccchhHHHHHHHhccccccCCCe-EE-eccchhh----c---cc
Confidence            569999995 99999999999999854 57888888765543222111      11111 11 1122221    2   38


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCc-eEEEeec
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN-LLIHLST  128 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~-~~v~~Ss  128 (320)
                      +|+|+..||....+  .++....++.|+.-. ..++....+.+.+ -+|.+|.
T Consensus        89 adiVVitAg~~~~~--g~tR~~l~~~N~~i~-~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          89 SKIVVVTAGVRQQE--GESRLNLVQRNVNVF-KFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             CSEEEECCSCCCCT--TCCGGGGHHHHHHHH-HHHHHHHHHHCTTCEEEECSS
T ss_pred             ccEEEEecCCcccc--CcchHHHHHHHHHHH-HHHHHHHHhcCCCcEEEEeCC
Confidence            99999999975332  345667777887655 4777777776654 4555554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.55  E-value=0.00023  Score=51.08  Aligned_cols=109  Identities=16%  Similarity=0.174  Sum_probs=64.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-------CCcceEEEeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-------PHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      ++||.|.|+ |.+|+.++-.|..++-  .++.+.+..++........+       +....+...  .|.+   + +.   
T Consensus         1 r~KI~IIGa-G~VG~~~A~~l~~~~l--~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~---~-~~---   68 (142)
T d1uxja1           1 RKKISIIGA-GFVGSTTAHWLAAKEL--GDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA---D-TA---   68 (142)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG---G-GT---
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCc--ceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHH---H-hc---
Confidence            468999996 9999999998888774  58888888776644322221       112221111  1222   1 23   


Q ss_pred             CCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEe
Q 020880           76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHL  126 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~  126 (320)
                      +.|+||-+||....+  ..+..+.+..|..-. ..+++...+.+.+-++.+
T Consensus        69 ~advvvitag~~~~~--~~~r~dl~~~N~~i~-~~i~~~i~k~~p~aiviv  116 (142)
T d1uxja1          69 NSDVIVVTSGAPRKP--GMSREDLIKVNADIT-RACISQAAPLSPNAVIIM  116 (142)
T ss_dssp             TCSEEEECCSCC-----------CHHHHHHHH-HHHHHHHGGGCTTCEEEE
T ss_pred             CCCEEEEeeeccCCc--CcchhHHHhHHHHHH-HHHHHHHhccCCCceEEE
Confidence            899999999864322  234456667776554 477888877665444433

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.53  E-value=0.00018  Score=51.58  Aligned_cols=111  Identities=12%  Similarity=-0.011  Sum_probs=69.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh-------CCCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA-------LPHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      |||.|.|+ |.+|++++-.|+.+|.- .++.+.+++++..+.....       .+........  .|.+    .+.   +
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~-~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~----~~~---~   69 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDV-DEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LLK---G   69 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCC-SEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG----GGT---T
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcC-ceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHH----Hhc---c
Confidence            68999996 99999999999988853 5788888876554322111       1222222211  1222    133   8


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCce-EEEeec
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL-LIHLST  128 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~-~v~~Ss  128 (320)
                      +|+|+-.||....  ...+....+..|..-. ..+.+.+.+.+.+- ++.+|.
T Consensus        70 adiVvitag~~~~--~g~~r~~l~~~n~~i~-~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          70 SEIIVVTAGLARK--PGMTRLDLAHKNAGII-KDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             CSEEEECCCCCCC--SSCCHHHHHHHHHHHH-HHHHHHHHTTSTTCEEEECSS
T ss_pred             ccEEEEeccccCC--CCCchHHHHHHhhHHH-HHHHHHHHhhCCCcEEEEecC
Confidence            9999999986432  2335567777787665 37777777766543 444443

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.52  E-value=5.4e-05  Score=57.43  Aligned_cols=102  Identities=19%  Similarity=0.124  Sum_probs=62.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCce-EEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYD-VAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      .+|||+||+|-+|+..++.....|   .+ |++.++++++...+...++..   ...|..+++.. +.++..  .++|+|
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~G---a~~vi~~~~~~e~~~~l~~~~gad---~vi~~~~~~~~-~~~~~~~~~GvDvv  104 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLG---CSRVVGICGTQEKCLFLTSELGFD---AAVNYKTGNVA-EQLREACPGGVDVY  104 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTT---CSEEEEEESSHHHHHHHHHHSCCS---EEEETTSSCHH-HHHHHHCTTCEEEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcC---CcceecccchHHHHhhhhhcccce---EEeeccchhHH-HHHHHHhccCceEE
Confidence            679999999999999999998888   54 555556555555454444332   45577665543 333322  369999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhhc
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYE  133 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy~  133 (320)
                      |.+.|..           .        +...++.++..|  +++.++++..|.
T Consensus       105 ~D~vGg~-----------~--------~~~~~~~l~~~G--~iv~~G~~s~~~  136 (187)
T d1vj1a2         105 FDNVGGD-----------I--------SNTVISQMNENS--HIILCGQISQYN  136 (187)
T ss_dssp             EESSCHH-----------H--------HHHHHTTEEEEE--EEEEC-------
T ss_pred             EecCCch-----------h--------HHHHhhhccccc--cEEEeccccccc
Confidence            9998621           0        125566666666  899888776553

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=0.00031  Score=47.93  Aligned_cols=69  Identities=19%  Similarity=0.334  Sum_probs=54.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      ..||.|.| +|.+|+-++....+.|   ++++.++.+++.......     -.++.+|..|.+.+.++.... ++|+|-
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG---~~v~v~d~~~~~PA~~va-----~~~i~~~~~d~~~l~~~~~~~-~~DviT   79 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLG---VEVIAVDRYADAPAMHVA-----HRSHVINMLDGDALRRVVELE-KPHYIV   79 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTT---CEEEEEESSTTCGGGGGS-----SEEEECCTTCHHHHHHHHHHH-CCSEEE
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCC---CEEEEEcCCCCCchhhcC-----CeEEECCCCCHHHHHHHHHhh-CCceEE
Confidence            46899999 7999999999999999   889988888665433222     235789999999988877653 789885

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.48  E-value=0.00019  Score=55.69  Aligned_cols=107  Identities=17%  Similarity=0.312  Sum_probs=64.9

Q ss_pred             CCCcEEEEEcC----------------CChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCc
Q 020880            1 MSKKRVLVVGG----------------TGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG   64 (320)
Q Consensus         1 m~~~~ilItGa----------------tG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~   64 (320)
                      +.+|+||||+|                ||..|.+|++++..+|   .+|+.+....+..      .+..+..+  .+...
T Consensus         4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~G---a~V~li~g~~~~~------~p~~~~~~--~~~t~   72 (223)
T d1u7za_           4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG---ANVTLVSGPVSLP------TPPFVKRV--DVMTA   72 (223)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT---CEEEEEECSCCCC------CCTTEEEE--ECCSH
T ss_pred             cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcC---CchhhhhcccccC------cccccccc--eehhh
Confidence            35789999975                8999999999999999   6777665543321      12344433  33444


Q ss_pred             ccHHH-HHHHhCCCCEEEECCCccCccccccCc---------hhhhhccccccHHHHHhhhhhcc
Q 020880           65 SGFDA-VALKFGQPDVVVNCAALSVPRVCENDP---------DSAMSINVPSSLVNWLSSFTENK  119 (320)
Q Consensus        65 ~~~~~-~~~~~~~~d~Vih~a~~~~~~~~~~~~---------~~~~~~n~~~~~~~~l~~~~~~~  119 (320)
                      +++.+ +.+.+.++|++|++|+...........         ...+..++..+- .++....+..
T Consensus        73 ~~m~~~~~~~~~~~D~~i~aAAvsDf~~~~~~~~k~Kk~~~~~~~l~L~L~~tp-dIL~~l~~~k  136 (223)
T d1u7za_          73 LEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNP-DIVAGVAALK  136 (223)
T ss_dssp             HHHHHHHHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECC-CHHHHHHHCS
T ss_pred             HHHHHHHHhhhccceeEeeeechhhhhhhhhhhhhcccccccccccceeeecCH-HHHHHHHhhc
Confidence            44433 334456899999999987542211111         111234455553 7777775543

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.44  E-value=6.7e-05  Score=56.58  Aligned_cols=39  Identities=18%  Similarity=0.415  Sum_probs=29.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL   42 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~   42 (320)
                      ++.||.|.|||||+|+.|++.|.+.-+  +++..+..+...
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~--~ei~~l~S~~~a   42 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQ--FRIKVMTADRKA   42 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSS--EEEEEEECSTTT
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCC--ceEEEEeccccC
Confidence            467999999999999999998887533  777666544333

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.44  E-value=7.3e-05  Score=55.74  Aligned_cols=114  Identities=13%  Similarity=0.063  Sum_probs=66.0

Q ss_pred             EEEEEcCCChhhHHHHHHHhhcc---CC-CceEEEecCCCCCh--hhhh---hhC-CCcceEEEeeCCCcccHHHHHHHh
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIE---GK-PYDVAATHHSTPLP--QLLL---DAL-PHSFVFFDVDLKSGSGFDAVALKF   74 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g---~~-v~~v~~~~r~~~~~--~~~~---~~~-~~~~~~~~~Dl~d~~~~~~~~~~~   74 (320)
                      ||.||||+|.||++++-.|.+..   .. ..++..+.......  ..+.   ... ......+.  .++  ...+.++  
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~--~~~--~~~~~~~--   99 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IGI--DPYEVFE--   99 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EES--CHHHHTT--
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcc--ccc--cchhhcc--
Confidence            89999999999999999887643   11 13455555543221  1111   111 11111111  111  1223444  


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccC--ceEEEeec
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE--NLLIHLST  128 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~--~~~v~~Ss  128 (320)
                       +.|+||-+||..  ....+...+.+..|..-. ..+.+++.+...  -+++.+|.
T Consensus       100 -~aDvVvi~ag~~--rkpg~tR~Dll~~N~~I~-k~~~~~i~~~a~~~~~vlvv~N  151 (175)
T d7mdha1         100 -DVDWALLIGAKP--RGPGMERAALLDINGQIF-ADQGKALNAVASKNVKVLVVGN  151 (175)
T ss_dssp             -TCSEEEECCCCC--CCTTCCHHHHHHHHHHHH-HHHHHHHHHHSCTTCEEEECSS
T ss_pred             -CCceEEEeeccC--CCCCCcHHHHHHHHHHHH-HHHHHHHHhhCCCCcEEEEecC
Confidence             899999999874  333456778888887665 477777777432  25666664

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.44  E-value=0.00015  Score=53.96  Aligned_cols=99  Identities=16%  Similarity=0.155  Sum_probs=63.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCc--ccHHHHHHHh--CCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG--SGFDAVALKF--GQPD   78 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~--~~~d   78 (320)
                      +.+|+|+| +|-||...++.+...|   .+|+++.+++++.+...+ ++.... +..|-.+.  ..+.+.+...  .++|
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~G---a~vi~v~~~~~r~~~a~~-~ga~~~-~~~~~~~~~~~~~~~~~~~~~g~g~D  100 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYG---AFVVCTARSPRRLEVAKN-CGADVT-LVVDPAKEEESSIIERIRSAIGDLPN  100 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHH-TTCSEE-EECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhc---ccccccchHHHHHHHHHH-cCCcEE-EeccccccccchhhhhhhcccccCCc
Confidence            46899998 6899999999999999   899999998766544333 332222 23332222  2222333221  3699


Q ss_pred             EEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEee
Q 020880           79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS  127 (320)
Q Consensus        79 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~S  127 (320)
                      +||.++|..         .         ++...++.++..|  +++.++
T Consensus       101 ~vid~~g~~---------~---------~~~~a~~~~~~~G--~iv~~G  129 (170)
T d1e3ja2         101 VTIDCSGNE---------K---------CITIGINITRTGG--TLMLVG  129 (170)
T ss_dssp             EEEECSCCH---------H---------HHHHHHHHSCTTC--EEEECS
T ss_pred             eeeecCCCh---------H---------HHHHHHHHHhcCC--ceEEEe
Confidence            999998731         0         1135667777776  788776

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.41  E-value=0.00026  Score=50.77  Aligned_cols=110  Identities=10%  Similarity=0.053  Sum_probs=70.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh------CCCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA------LPHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      .||.|.|+ |.+|++++-.|+.+|.. .++.+.++++++.+.....      +.........  .+.+   + +.   ++
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~-~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~---~-~~---da   70 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIA-REIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPE---I-CR---DA   70 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCC-SEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGG---G-GT---TC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCC-cEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHH---H-hh---CC
Confidence            47999996 99999999999988854 5788888876554322111      1122232222  2222   1 33   89


Q ss_pred             CEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCce-EEEee
Q 020880           78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL-LIHLS  127 (320)
Q Consensus        78 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~-~v~~S  127 (320)
                      |+|+-+||....  ...+..+.+..|..-. ..++..+.+.+.+- +|.+|
T Consensus        71 DvVVitaG~~~~--~g~~R~dl~~~N~~i~-~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          71 DMVVITAGPRQK--PGQSRLELVGATVNIL-KAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             SEEEECCCCCCC--TTCCHHHHHHHHHHHH-HHHHHHHHHHCTTSEEEECC
T ss_pred             cEEEEecccccC--CCCchhhhhhhhHHHH-HHHHHHHHhhCCCeEEEEeC
Confidence            999999997532  2345667788887665 47777777776543 44444

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.35  E-value=5.9e-05  Score=57.22  Aligned_cols=76  Identities=14%  Similarity=0.177  Sum_probs=50.5

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-----CCcceEEEeeCCCcccHHHHHHHhC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-----PHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      |.|+||.|.| +|-.|++++..|.++|   ++|....|+++....+....     .+++. ..-++.-..++.++++   
T Consensus         5 ~~m~KI~ViG-aG~wGtAlA~~La~~g---~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~-l~~~i~~t~~l~~a~~---   76 (189)
T d1n1ea2           5 LYLNKAVVFG-SGAFGTALAMVLSKKC---REVCVWHMNEEEVRLVNEKRENVLFLKGVQ-LASNITFTSDVEKAYN---   76 (189)
T ss_dssp             CCEEEEEEEC-CSHHHHHHHHHHHTTE---EEEEEECSCHHHHHHHHHHTBCTTTSTTCB-CCTTEEEESCHHHHHT---
T ss_pred             ceeceEEEEC-CCHHHHHHHHHHHHcC---CeEEEEEecHHHHHHHhhcccccccccccc-cccccccchhhhhccC---
Confidence            5578899999 7999999999999999   78999999866555443221     11111 1111211224566666   


Q ss_pred             CCCEEEECC
Q 020880           76 QPDVVVNCA   84 (320)
Q Consensus        76 ~~d~Vih~a   84 (320)
                      ++|+||-+.
T Consensus        77 ~ad~iiiav   85 (189)
T d1n1ea2          77 GAEIILFVI   85 (189)
T ss_dssp             TCSCEEECS
T ss_pred             CCCEEEEcC
Confidence            889998764

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.34  E-value=0.00095  Score=48.95  Aligned_cols=42  Identities=17%  Similarity=0.238  Sum_probs=35.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD   48 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~   48 (320)
                      |++|.+.| .|-+|+.+++.|+++|   |+|.+..|++++.+.+..
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g---~~v~~~d~~~~~~~~~~~   42 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAG---YLLNVFDLVQSAVDGLVA   42 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTT---CEEEEECSSHHHHHHHHH
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCC---CeEEEEECchhhhhhhhh
Confidence            57899998 8999999999999999   899999998766555443

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.33  E-value=4e-05  Score=56.88  Aligned_cols=97  Identities=20%  Similarity=0.140  Sum_probs=62.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCC--cccHHHHHHHhCCCCEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS--GSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~d~Vi   81 (320)
                      ..|||+||+|-+|+..++.....|   .+|+++++++++.+.+.+.-.+ .  + .|..+  .+.+.....  +++|.||
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~~G---a~Viat~~s~~k~~~~~~lGad-~--v-i~~~~~~~~~~~~~~~--~gvd~vi   95 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNKRG---YDVVASTGNREAADYLKQLGAS-E--V-ISREDVYDGTLKALSK--QQWQGAV   95 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHT---CCEEEEESSSSTHHHHHHHTCS-E--E-EEHHHHCSSCCCSSCC--CCEEEEE
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcC---CceEEEecCHHHHHHHHhhccc-c--e-EeccchhchhhhcccC--CCceEEE
Confidence            479999999999999999999999   8999999998887666553222 1  1 12211  111111111  3689999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      ++.+-..                   +...++.++..|  ++|.++...
T Consensus        96 d~vgg~~-------------------~~~~~~~l~~~G--~iv~~G~~~  123 (167)
T d1tt7a2          96 DPVGGKQ-------------------LASLLSKIQYGG--SVAVSGLTG  123 (167)
T ss_dssp             ESCCTHH-------------------HHHHHTTEEEEE--EEEECCCSS
T ss_pred             ecCcHHH-------------------HHHHHHHhccCc--eEEEeeccC
Confidence            8866310                   135666666666  777776554

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.0001  Score=46.63  Aligned_cols=41  Identities=22%  Similarity=0.383  Sum_probs=35.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL   46 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~   46 (320)
                      .++|||+||+|-+|+..++.+...|   ++|+++.+++++.+.+
T Consensus        32 ~~~vlI~gasGgVG~~aiQlak~~G---~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          32 DGEIVVTGASGGVGSTAVALLHKLG---YQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCGGGHHHH
T ss_pred             CCcEEEEeCCCcHHHHHHHHHHHcC---CeEEEEECCHHHHHHH
Confidence            4689999999999999999989999   8999999987766544

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.30  E-value=0.00089  Score=48.27  Aligned_cols=113  Identities=16%  Similarity=0.133  Sum_probs=70.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC-------CCcceEEEeeCCCcccHHHHHHHhC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-------PHSFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      ++||-|.|+ |.+|++++-.|..++-  .++.+.+++++.++.....+       .........  .+.+.    +.   
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l--~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~--~~~~~----~~---   70 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNL--GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NTYDD----LA---   70 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CCGGG----GT---
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeccCCcceeeecchhhhccccCCCcEEEec--ccccc----cC---
Confidence            568999995 9999999987776663  68888888876654432222       112222221  12221    23   


Q ss_pred             CCCEEEECCCccCccc---cccCchhhhhccccccHHHHHhhhhhccCce-EEEeec
Q 020880           76 QPDVVVNCAALSVPRV---CENDPDSAMSINVPSSLVNWLSSFTENKENL-LIHLST  128 (320)
Q Consensus        76 ~~d~Vih~a~~~~~~~---~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~-~v~~Ss  128 (320)
                      +.|+|+-+||....+.   ...+....+..|..-. ..+.+.+++...+- ++.+|.
T Consensus        71 ~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv-~~i~~~i~~~~p~aivivvtN  126 (150)
T d1t2da1          71 GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIM-IEIGGHIKKNCPNAFIIVVTN  126 (150)
T ss_dssp             TCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHH-HHHHHHHHHHCTTSEEEECSS
T ss_pred             CCcEEEEecccccCCCCCccccchhHHHHHHHHHH-HHHHHHHHhcCCCeEEEEecC
Confidence            8999999999653221   1234566677787665 37777777776544 444443

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.23  E-value=0.00019  Score=53.34  Aligned_cols=44  Identities=20%  Similarity=0.278  Sum_probs=35.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD   48 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~   48 (320)
                      ||+|+|.| .|.||+.+++.|.++|+. .+|++.+|+++..+...+
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~-~~I~~~D~~~~~~~~a~~   44 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFK-GKIYGYDINPESISKAVD   44 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCC-SEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCC-eEEEEEECChHHHHHHHH
Confidence            57899998 699999999999999965 689999988665544433

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.20  E-value=0.00035  Score=53.43  Aligned_cols=39  Identities=26%  Similarity=0.339  Sum_probs=33.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhh
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL   46 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~   46 (320)
                      |||.|.| .||+|..++..|.++|   ++|++.+.+++..+.+
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g---~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARG---HEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTT---CEEEEECSCHHHHHHH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCC---CcEEEEeCCHHHHHHh
Confidence            6799997 8999999999999999   8999999876554443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.18  E-value=0.00049  Score=50.88  Aligned_cols=74  Identities=15%  Similarity=0.121  Sum_probs=50.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +.+|+|.|+ |-+|...++.+...|   .+|+++++++++.+...+ ++.. +  ..|..+...+.+...  +++|.++.
T Consensus        28 g~~vlI~Ga-G~vG~~a~q~ak~~G---~~vi~~~~~~~k~~~a~~-lGa~-~--~i~~~~~~~~~~~~~--~~~d~vi~   97 (168)
T d1piwa2          28 GKKVGIVGL-GGIGSMGTLISKAMG---AETYVISRSSRKREDAMK-MGAD-H--YIATLEEGDWGEKYF--DTFDLIVV   97 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHT---CEEEEEESSSTTHHHHHH-HTCS-E--EEEGGGTSCHHHHSC--SCEEEEEE
T ss_pred             CCEEEEECC-CCcchhHHHHhhhcc---ccccccccchhHHHHhhc-cCCc-E--EeeccchHHHHHhhh--cccceEEE
Confidence            578999996 999999999888899   899999998877655433 3322 1  223333333322222  47899999


Q ss_pred             CCCc
Q 020880           83 CAAL   86 (320)
Q Consensus        83 ~a~~   86 (320)
                      +.+.
T Consensus        98 ~~~~  101 (168)
T d1piwa2          98 CASS  101 (168)
T ss_dssp             CCSC
T ss_pred             EecC
Confidence            8764

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.00037  Score=50.70  Aligned_cols=76  Identities=13%  Similarity=0.119  Sum_probs=57.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh-hCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-ALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      +.+|+|.|. |-+|..+++.|.++|   .+|+.+..+++......+ ....++.++.+|.+|++.++++--  ++++.||
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~---~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i--~~a~~vi   76 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRG---QNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGI--DRCRAIL   76 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTT---CCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTT--TTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC---CCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhcc--ccCCEEE
Confidence            347999995 999999999999999   788888877654433332 234578889999999987765432  4789998


Q ss_pred             ECC
Q 020880           82 NCA   84 (320)
Q Consensus        82 h~a   84 (320)
                      -+.
T Consensus        77 ~~~   79 (153)
T d1id1a_          77 ALS   79 (153)
T ss_dssp             ECS
T ss_pred             Ecc
Confidence            764

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.0014  Score=43.08  Aligned_cols=89  Identities=18%  Similarity=0.215  Sum_probs=57.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+|+|.|. |-.|..+++.|.++|   .+|++.+.+......  +.+.....+......     ...+.   ++|.||
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g---~~v~~~D~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~---~~d~vi   69 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARG---VTPRVMDTRMTPPGL--DKLPEAVERHTGSLN-----DEWLM---AADLIV   69 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTT---CCCEEEESSSSCTTG--GGSCTTSCEEESBCC-----HHHHH---HCSEEE
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCC---CEEEEeeCCcCchhH--HHHhhccceeecccc-----hhhhc---cCCEEE
Confidence            4689999995 889999999999999   778877776543221  222234444444321     12344   689999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEE
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI  124 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v  124 (320)
                      -.-|..  .   .              ..+++.|++.++ ++|
T Consensus        70 ~SPGi~--~---~--------------~~~~~~a~~~gi-~ii   92 (93)
T d2jfga1          70 ASPGIA--L---A--------------HPSLSAAADAGI-EIV   92 (93)
T ss_dssp             ECTTSC--T---T--------------SHHHHHHHHTTC-EEE
T ss_pred             ECCCCC--C---C--------------CHHHHHHHHcCC-CeE
Confidence            866542  1   0              267777778777 443

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.16  E-value=5.7e-05  Score=56.60  Aligned_cols=98  Identities=11%  Similarity=0.046  Sum_probs=63.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      .+|||+||+|-+|+..++.....|   .+|++++|++++.+.+.+. +  .. ...|..+.+..+.+.+  ...|.+|++
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~G---a~Via~~~~~~k~~~~~~l-G--ad-~vi~~~~~~~~~~l~~--~~~~~vvD~  103 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLG---YQVVAVSGRESTHEYLKSL-G--AS-RVLPRDEFAESRPLEK--QVWAGAIDT  103 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCGGGHHHHHHH-T--EE-EEEEGGGSSSCCSSCC--CCEEEEEES
T ss_pred             CcEEEEEccccchHHHHHHHHHcC---CCeEEEecchhHHHHHHhh-c--cc-cccccccHHHHHHHHh--hcCCeeEEE
Confidence            489999999999999999999999   8999999998776554432 2  11 1234333322221111  256888887


Q ss_pred             CCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhh
Q 020880           84 AALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV  131 (320)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~v  131 (320)
                      .+-.           .        +...++.++..|  ++|.++...-
T Consensus       104 Vgg~-----------~--------~~~~l~~l~~~G--riv~~G~~~~  130 (177)
T d1o89a2         104 VGDK-----------V--------LAKVLAQMNYGG--CVAACGLAGG  130 (177)
T ss_dssp             SCHH-----------H--------HHHHHHTEEEEE--EEEECCCTTC
T ss_pred             cchH-----------H--------HHHHHHHhcccc--ceEeecccCC
Confidence            6521           1        135666666666  8888876643

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.14  E-value=0.00034  Score=51.61  Aligned_cols=41  Identities=17%  Similarity=0.218  Sum_probs=34.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD   48 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~   48 (320)
                      |||.|.| .|.+|+.+++.|.++|   ++|++.+|+++..+...+
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g---~~V~~~d~~~~~~~~a~~   41 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRG---HYLIGVSRQQSTCEKAVE   41 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCC---CEEEEEECCchHHHHHHH
Confidence            5799998 6999999999999999   899999998665554333

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.13  E-value=0.00012  Score=53.49  Aligned_cols=33  Identities=27%  Similarity=0.305  Sum_probs=24.8

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEec
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH   37 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~   37 (320)
                      ||.|.|||||+|+.|++.|.+..+...++..+.
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~   35 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA   35 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEec
Confidence            799999999999999998876642224554443

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.12  E-value=0.00019  Score=53.31  Aligned_cols=73  Identities=16%  Similarity=0.216  Sum_probs=50.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +++|+|.|+ |-.|+.++..|.+.+   -+|+.+.|+.++++.+.+.+.........+..+..        ...+|+|||
T Consensus        18 ~k~vlIlGa-GGaarai~~aL~~~~---~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~--------~~~~diiIN   85 (171)
T d1p77a1          18 NQHVLILGA-GGATKGVLLPLLQAQ---QNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIP--------LQTYDLVIN   85 (171)
T ss_dssp             TCEEEEECC-SHHHHTTHHHHHHTT---CEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCC--------CSCCSEEEE
T ss_pred             CCEEEEECC-cHHHHHHHHHHcccC---ceeeeccchHHHHHHHHHHHhhccccchhhhcccc--------ccccceeee
Confidence            679999995 667999999998766   78999999988877776655432222222221111        137999999


Q ss_pred             CCCcc
Q 020880           83 CAALS   87 (320)
Q Consensus        83 ~a~~~   87 (320)
                      +....
T Consensus        86 ~tp~g   90 (171)
T d1p77a1          86 ATSAG   90 (171)
T ss_dssp             CCCC-
T ss_pred             ccccc
Confidence            97654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.11  E-value=0.0012  Score=47.76  Aligned_cols=64  Identities=16%  Similarity=0.129  Sum_probs=46.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |||.|.| .|-+|+.+++.|+++|   ++|+...+.+++.......   ... +.      ++..++++   ++|+||-|
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g---~~v~~~~~~~~~~~~~~~~---~~~-~~------~~~~e~~~---~~diIi~~   63 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRG---VEVVTSLEGRSPSTIERAR---TVG-VT------ETSEEDVY---SCPVVISA   63 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTT---CEEEECCTTCCHHHHHHHH---HHT-CE------ECCHHHHH---TSSEEEEC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCC---CeEEEEcCchhHHHHHhhh---ccc-cc------ccHHHHHh---hcCeEEEE
Confidence            5799998 7999999999999999   8888888877665544432   111 11      12445666   89999977


Q ss_pred             C
Q 020880           84 A   84 (320)
Q Consensus        84 a   84 (320)
                      .
T Consensus        64 v   64 (152)
T d1i36a2          64 V   64 (152)
T ss_dssp             S
T ss_pred             e
Confidence            4

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.10  E-value=0.00045  Score=51.75  Aligned_cols=75  Identities=16%  Similarity=0.001  Sum_probs=49.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC-----CcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-----HSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      .|||.|.|| |-+|+.++..|.++|   ++|.+..|+++..+.+.....     ..............+..++++   ++
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~---~a   73 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKG---QSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK---DA   73 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT---TC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhc---CC
Confidence            379999995 999999999999999   899999998766555443211     111111111111223455665   89


Q ss_pred             CEEEECC
Q 020880           78 DVVVNCA   84 (320)
Q Consensus        78 d~Vih~a   84 (320)
                      |+||-+.
T Consensus        74 D~iii~v   80 (184)
T d1bg6a2          74 DVILIVV   80 (184)
T ss_dssp             SEEEECS
T ss_pred             CEEEEEE
Confidence            9999874

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.10  E-value=0.00028  Score=51.88  Aligned_cols=64  Identities=20%  Similarity=0.258  Sum_probs=49.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |||-|.| .|.+|+.+++.|+++|   ++|++..|++++.+.+.+..   ..  .     .++..++++   ++|+||-|
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G---~~V~~~d~~~~~~~~~~~~~---~~--~-----~~~~~e~~~---~~d~ii~~   63 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAG---YSLVVSDRNPEAIADVIAAG---AE--T-----ASTAKAIAE---QCDVIITM   63 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHTT---CE--E-----CSSHHHHHH---HCSEEEEC
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCC---CeEEEEeCCcchhHHHHHhh---hh--h-----cccHHHHHh---CCCeEEEE
Confidence            5799999 7999999999999999   89999999987776665532   11  1     123556666   78999977


Q ss_pred             C
Q 020880           84 A   84 (320)
Q Consensus        84 a   84 (320)
                      -
T Consensus        64 v   64 (161)
T d1vpda2          64 L   64 (161)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.03  E-value=0.00065  Score=50.50  Aligned_cols=99  Identities=11%  Similarity=0.049  Sum_probs=59.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh-CCCCEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF-GQPDVVV   81 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~d~Vi   81 (320)
                      +.+|+|.|+ |-||...++.+...|.  ..|++..+++.+.+. .++++. .  ...|..+.+..+++.+.. +++|+||
T Consensus        29 g~~VlI~G~-G~iG~~~~~~ak~~g~--~~v~~~~~~~~k~~~-a~~~Ga-~--~~i~~~~~~~~~~i~~~t~gg~D~vi  101 (174)
T d1f8fa2          29 ASSFVTWGA-GAVGLSALLAAKVCGA--SIIIAVDIVESRLEL-AKQLGA-T--HVINSKTQDPVAAIKEITDGGVNFAL  101 (174)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHHTC--SEEEEEESCHHHHHH-HHHHTC-S--EEEETTTSCHHHHHHHHTTSCEEEEE
T ss_pred             CCEEEEeCC-CHHHhhhhhccccccc--ceeeeeccHHHHHHH-HHHcCC-e--EEEeCCCcCHHHHHHHHcCCCCcEEE
Confidence            468999996 9999999999988883  244555555444333 333332 1  234666655444433322 3689999


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      .|.|...          .        +...++.++..|  +++.++.
T Consensus       102 d~~G~~~----------~--------~~~~~~~~~~~G--~i~~~G~  128 (174)
T d1f8fa2         102 ESTGSPE----------I--------LKQGVDALGILG--KIAVVGA  128 (174)
T ss_dssp             ECSCCHH----------H--------HHHHHHTEEEEE--EEEECCC
T ss_pred             EcCCcHH----------H--------HHHHHhcccCce--EEEEEee
Confidence            9987320          0        124455555656  7887764

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.03  E-value=0.00051  Score=49.85  Aligned_cols=65  Identities=14%  Similarity=0.275  Sum_probs=49.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |||.+.| +|-+|+++++.|++.|   ++++...|+.++.+.+.+.++-..         ..+..++++   ++|+||-+
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~---~~i~v~~r~~~~~~~l~~~~g~~~---------~~~~~~~~~---~~dvIila   64 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTP---HELIISGSSLERSKEIAEQLALPY---------AMSHQDLID---QVDLVILG   64 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSS---CEEEEECSSHHHHHHHHHHHTCCB---------CSSHHHHHH---TCSEEEEC
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCC---CeEEEEcChHHhHHhhccccceee---------echhhhhhh---ccceeeee
Confidence            5799998 8999999999999999   889999998777766655443111         123556676   89999966


Q ss_pred             C
Q 020880           84 A   84 (320)
Q Consensus        84 a   84 (320)
                      .
T Consensus        65 v   65 (152)
T d2ahra2          65 I   65 (152)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.02  E-value=0.00078  Score=49.74  Aligned_cols=95  Identities=20%  Similarity=0.181  Sum_probs=61.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +.+|+|.|+ |-||...++.+...|   .+++++++++++.+. ...++..   ...|..+.+....   ...++|++|.
T Consensus        31 G~~VlI~Ga-G~vG~~a~qlak~~G---a~~i~~~~~~~~~~~-a~~lGad---~~i~~~~~~~~~~---~~~~~D~vid   99 (168)
T d1uufa2          31 GKKVGVVGI-GGLGHMGIKLAHAMG---AHVVAFTTSEAKREA-AKALGAD---EVVNSRNADEMAA---HLKSFDFILN   99 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESSGGGHHH-HHHHTCS---EEEETTCHHHHHT---TTTCEEEEEE
T ss_pred             CCEEEEecc-chHHHHHHHHhhccc---ccchhhccchhHHHH-HhccCCc---EEEECchhhHHHH---hcCCCceeee
Confidence            568999996 889999999999999   788888887765433 3333322   2345555443222   2237999999


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeec
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST  128 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss  128 (320)
                      +.+....                  +...++.++..|  +++.++.
T Consensus       100 ~~g~~~~------------------~~~~~~~l~~~G--~iv~~G~  125 (168)
T d1uufa2         100 TVAAPHN------------------LDDFTTLLKRDG--TMTLVGA  125 (168)
T ss_dssp             CCSSCCC------------------HHHHHTTEEEEE--EEEECCC
T ss_pred             eeecchh------------------HHHHHHHHhcCC--EEEEecc
Confidence            9874211                  124555556665  6777653

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.02  E-value=0.00094  Score=49.33  Aligned_cols=78  Identities=15%  Similarity=0.157  Sum_probs=53.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      ..+|+|.|++|-+|...+..+...|.  ..|++..+++++.+...+ ++..   ...|..+.+..++..+..  .++|+|
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~--~~V~~~~~~~~~~~~~~~-~Ga~---~~i~~~~~~~~~~~~~~~~~~~~d~v  101 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVREEAVEAAKR-AGAD---YVINASMQDPLAEIRRITESKGVDAV  101 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESSHHHHHHHHH-HTCS---EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             CCEEEEEeccccceeeeeeccccccc--ccccccccchhhHHHHHH-cCCc---eeeccCCcCHHHHHHHHhhcccchhh
Confidence            46899999999999999999998884  477777777654443333 3221   234556665555555433  258999


Q ss_pred             EECCCc
Q 020880           81 VNCAAL   86 (320)
Q Consensus        81 ih~a~~   86 (320)
                      |.|++.
T Consensus       102 id~~g~  107 (170)
T d1jvba2         102 IDLNNS  107 (170)
T ss_dssp             EESCCC
T ss_pred             hccccc
Confidence            999863

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.01  E-value=0.0009  Score=49.72  Aligned_cols=98  Identities=14%  Similarity=0.057  Sum_probs=63.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +.+|+|.|+ |-||...++.+...|.  ..|++.++++++.+.. ..++..   ...|..+.+..+++.+..  .++|+|
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga--~~Vi~~d~~~~r~~~a-~~lGa~---~~i~~~~~~~~~~v~~~t~g~G~D~v  100 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLRGA--GRIIGVGSRPICVEAA-KFYGAT---DILNYKNGHIEDQVMKLTNGKGVDRV  100 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTC--SCEEEECCCHHHHHHH-HHHTCS---EEECGGGSCHHHHHHHHTTTSCEEEE
T ss_pred             CCEEEEEcC-Ccchhhhhhhhhcccc--cccccccchhhhHHHH-HhhCcc---ccccccchhHHHHHHHHhhccCcceE
Confidence            468999985 9999999999998884  3688888876554333 333311   234555544444444433  259999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEee
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS  127 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~S  127 (320)
                      |.++|...          .        +...++.++..|  +++.++
T Consensus       101 id~~g~~~----------~--------~~~a~~~~~~~G--~iv~~G  127 (174)
T d1jqba2         101 IMAGGGSE----------T--------LSQAVKMVKPGG--IISNIN  127 (174)
T ss_dssp             EECSSCTT----------H--------HHHHHHHEEEEE--EEEECC
T ss_pred             EEccCCHH----------H--------HHHHHHHHhcCC--EEEEEe
Confidence            99987421          0        135566777666  788776

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.01  E-value=0.0006  Score=49.60  Aligned_cols=115  Identities=17%  Similarity=0.132  Sum_probs=63.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccC----CCceEEEecCCCCCh--hhhh----hhCCCcceEEEeeCCCcccHHHHHHH
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEG----KPYDVAATHHSTPLP--QLLL----DALPHSFVFFDVDLKSGSGFDAVALK   73 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~----~v~~v~~~~r~~~~~--~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~~   73 (320)
                      +||.|+||+|.+|++++-.|...+-    ...++.....++...  +.+.    ........  .....+  ...+.++ 
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~--~~~~~~~-   78 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK--DVIATD--KEEIAFK-   78 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE--EEEEES--CHHHHTT-
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccc--ccccCc--ccccccC-
Confidence            6899999999999999998876541    113455555443222  1111    11111111  112211  1223344 


Q ss_pred             hCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhc-cCc-eEEEeec
Q 020880           74 FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-KEN-LLIHLST  128 (320)
Q Consensus        74 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~-~~~-~~v~~Ss  128 (320)
                        ++|+||-+||....+  .++....++.|..-. ..+.+...+. +.. .+|.+|.
T Consensus        79 --~~dvVVitag~~~~~--g~sr~dll~~N~~i~-k~~~~~i~k~a~~~~~iivvsN  130 (154)
T d5mdha1          79 --DLDVAILVGSMPRRD--GMERKDLLKANVKIF-KCQGAALDKYAKKSVKVIVVGN  130 (154)
T ss_dssp             --TCSEEEECCSCCCCT--TCCTTTTHHHHHHHH-HHHHHHHHHHSCTTCEEEECSS
T ss_pred             --CceEEEEecccCCCC--CCchhHHHHHhHHHH-HHHHHHHHhhCCCceEEEEecC
Confidence              899999999875332  334556677777654 3666666553 322 4555553

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.00  E-value=0.0011  Score=46.34  Aligned_cols=72  Identities=18%  Similarity=0.154  Sum_probs=43.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEEE
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVVV   81 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~Vi   81 (320)
                      |||.|.|++|-+|+.+.+.+.++|   +++.+..-... ...    + .... +..|++.|+.+.+.++..  .+.-.|+
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~---~~l~~~id~~~-~~~----~-~~~D-VvIDFS~p~~~~~~l~~~~~~~~p~Vi   70 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKG---HELVLKVDVNG-VEE----L-DSPD-VVIDFSSPEALPKTVDLCKKYRAGLVL   70 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEETTE-EEE----C-SCCS-EEEECSCGGGHHHHHHHHHHHTCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCC---CeEEEEECCCc-HHH----h-ccCC-EEEEecCHHHHHHHHHHHHhcCCCEEE
Confidence            579999999999999999888888   66654432211 100    0 1111 566777777655544321  1555565


Q ss_pred             ECCC
Q 020880           82 NCAA   85 (320)
Q Consensus        82 h~a~   85 (320)
                      =..|
T Consensus        71 GTTG   74 (128)
T d1vm6a3          71 GTTA   74 (128)
T ss_dssp             CCCS
T ss_pred             EcCC
Confidence            4433

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.98  E-value=0.00072  Score=50.66  Aligned_cols=97  Identities=14%  Similarity=0.101  Sum_probs=62.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCChhhhhhhCCCcceEEEeeCCCccc--H-HHHHHHh--CC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG--F-DAVALKF--GQ   76 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~--~-~~~~~~~--~~   76 (320)
                      +.+|||+|+ |-||...++.+...|   . +|++..+++++.+.. .+++..   ...|..+.+.  . +++.+..  .+
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~G---a~~Vi~~~~~~~~~~~a-~~lGa~---~vi~~~~~~~~~~~~~i~~~~~~~g  100 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSLG---AENVIVIAGSPNRLKLA-EEIGAD---LTLNRRETSVEERRKAIMDITHGRG  100 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTT---BSEEEEEESCHHHHHHH-HHTTCS---EEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred             CCEEEEECC-Cccchhheecccccc---ccccccccccccccccc-ccccce---EEEeccccchHHHHHHHHHhhCCCC
Confidence            469999996 899999999999999   6 788888887655433 334322   2345554332  2 2222221  25


Q ss_pred             CCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEee
Q 020880           77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS  127 (320)
Q Consensus        77 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~S  127 (320)
                      +|+||.+.|...                  ++...++.++..|  +++.++
T Consensus       101 ~Dvvid~vG~~~------------------~~~~a~~~l~~~G--~iv~~G  131 (182)
T d1vj0a2         101 ADFILEATGDSR------------------ALLEGSELLRRGG--FYSVAG  131 (182)
T ss_dssp             EEEEEECSSCTT------------------HHHHHHHHEEEEE--EEEECC
T ss_pred             ceEEeecCCchh------------------HHHHHHHHhcCCC--EEEEEe
Confidence            899999987421                  0135566666666  777776

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.97  E-value=0.0013  Score=48.49  Aligned_cols=68  Identities=16%  Similarity=0.210  Sum_probs=48.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++|+|.| +|-.|++++..|.+.|.  -+|....|+.++.+.+.+.++.  .  ..+  +..     .   .++|+|||
T Consensus        17 ~~~vlIlG-aGGaarai~~aL~~~g~--~~I~I~nR~~~ka~~L~~~~~~--~--~~~--~~~-----~---~~~DliIN   79 (167)
T d1npya1          17 NAKVIVHG-SGGMAKAVVAAFKNSGF--EKLKIYARNVKTGQYLAALYGY--A--YIN--SLE-----N---QQADILVN   79 (167)
T ss_dssp             TSCEEEEC-SSTTHHHHHHHHHHTTC--CCEEEECSCHHHHHHHHHHHTC--E--EES--CCT-----T---CCCSEEEE
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCC--CEEEEecccHHHHHHHHHhhhh--h--hhh--ccc-----c---cchhhhee
Confidence            57899999 58999999999999994  3688899998877766654421  1  111  110     1   27899999


Q ss_pred             CCCcc
Q 020880           83 CAALS   87 (320)
Q Consensus        83 ~a~~~   87 (320)
                      +....
T Consensus        80 aTpiG   84 (167)
T d1npya1          80 VTSIG   84 (167)
T ss_dssp             CSSTT
T ss_pred             ccccC
Confidence            87643

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.96  E-value=0.006  Score=42.78  Aligned_cols=75  Identities=17%  Similarity=0.193  Sum_probs=47.4

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEEEE
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVVVN   82 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~Vih   82 (320)
                      ||.|.|++|-+|+.+++.+.+...  +++.+..-..+.......   .+.. +..|++.|+.+.+.++..  .+.-.|+=
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~--~~l~~~~d~~~~~~~~~~---~~~D-vvIDFS~p~~~~~~~~~~~~~~~~~ViG   74 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADD--LTLSAELDAGDPLSLLTD---GNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVG   74 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTT--SEEEEEECTTCCTHHHHT---TTCS-EEEECCCTTTHHHHHHHHHHTTCEEEEC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCC--CEEEEEEecCCchhhhcc---ccCC-EEEEcccHHHHHHHHHHHHhcCCCEEEe
Confidence            799999999999999998876543  676654443333322222   1222 677888888765554322  36677774


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      ..|
T Consensus        75 TTG   77 (135)
T d1yl7a1          75 TTG   77 (135)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            433

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.81  E-value=0.005  Score=45.72  Aligned_cols=93  Identities=13%  Similarity=0.208  Sum_probs=61.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+++|.|.| .|-||+.+++.|..-|   .+|.+..|.+....                ..-.+++++++.   .+|+|+
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~g---~~v~~~d~~~~~~~----------------~~~~~~l~ell~---~sDiv~   97 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAALG---AQVRGFSRTPKEGP----------------WRFTNSLEEALR---EARAAV   97 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHTT---CEEEEECSSCCCSS----------------SCCBSCSHHHHT---TCSEEE
T ss_pred             cCceEEEec-cccccccceeeeeccc---cccccccccccccc----------------eeeeechhhhhh---ccchhh
Confidence            468999999 7999999999999999   89999988753211                111234667777   899988


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      .+......           ..|+..  ...++.+++..  -||.+|-..+.
T Consensus        98 ~~~pl~~~-----------t~~li~--~~~l~~mk~~a--ilIN~~RG~iv  133 (181)
T d1qp8a1          98 CALPLNKH-----------TRGLVK--YQHLALMAEDA--VFVNVGRAEVL  133 (181)
T ss_dssp             ECCCCSTT-----------TTTCBC--HHHHTTSCTTC--EEEECSCGGGB
T ss_pred             cccccccc-----------cccccc--cceeeeccccc--eEEeccccccc
Confidence            76543211           112222  25566665443  57777766554

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.81  E-value=0.0016  Score=47.89  Aligned_cols=75  Identities=23%  Similarity=0.217  Sum_probs=51.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ..+|+|.|+ |-||...++.+...|   .+|++..+++++.+... .++..   ...|..+.+..+.+.+...+.+.+|-
T Consensus        28 g~~VlV~Ga-G~vG~~~~~~ak~~G---~~Vi~~~~~~~~~~~a~-~~Ga~---~~i~~~~~~~~~~~~~~~~g~~~~i~   99 (166)
T d1llua2          28 GQWVAISGI-GGLGHVAVQYARAMG---LHVAAIDIDDAKLELAR-KLGAS---LTVNARQEDPVEAIQRDIGGAHGVLV   99 (166)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHH-HTTCS---EEEETTTSCHHHHHHHHHSSEEEEEE
T ss_pred             CCEEEEeec-cccHHHHHHHHHHcC---CccceecchhhHHHhhh-ccCcc---ccccccchhHHHHHHHhhcCCccccc
Confidence            568999986 999999999888899   89999998866654433 33321   23466666655555544446666666


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +++
T Consensus       100 ~~~  102 (166)
T d1llua2         100 TAV  102 (166)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            554

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.79  E-value=0.00075  Score=49.96  Aligned_cols=37  Identities=24%  Similarity=0.399  Sum_probs=29.8

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      |+++||.|.| +|.+|+..++.|.+...  ++++++....
T Consensus         1 M~kirvgiiG-~G~ig~~~~~~l~~~~~--~elvav~~~~   37 (170)
T d1f06a1           1 MTNIRVAIVG-YGNLGRSVEKLIAKQPD--MDLVGIFSRR   37 (170)
T ss_dssp             CCCEEEEEEC-CSHHHHHHHHHHTTCSS--EEEEEEEESS
T ss_pred             CCcceEEEEC-ChHHHHHHHHHHHhCCC--cEEEEEEecc
Confidence            8888999999 79999999999987533  7877665544

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.78  E-value=0.004  Score=42.39  Aligned_cols=93  Identities=8%  Similarity=0.015  Sum_probs=60.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+++|+|.| +|-+|..-++.|++.|   .+|+......++....... ..++.+...+..+.+     +.   +++.|+
T Consensus        11 ~~k~vlVvG-~G~va~~ka~~ll~~g---a~v~v~~~~~~~~~~~~~~-~~~i~~~~~~~~~~d-----l~---~~~lv~   77 (113)
T d1pjqa1          11 RDRDCLIVG-GGDVAERKARLLLEAG---ARLTVNALTFIPQFTVWAN-EGMLTLVEGPFDETL-----LD---SCWLAI   77 (113)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTT---BEEEEEESSCCHHHHHHHT-TTSCEEEESSCCGGG-----GT---TCSEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCC---CeEEEEeccCChHHHHHHh-cCCceeeccCCCHHH-----hC---CCcEEe
Confidence            378999999 6999999999999999   7777766654443322221 245666665554322     22   788888


Q ss_pred             ECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEee
Q 020880           82 NCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS  127 (320)
Q Consensus        82 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~S  127 (320)
                      .+.+-         ++    .|     ..+.+.|++.++  +|.+.
T Consensus        78 ~at~d---------~~----~n-----~~i~~~a~~~~i--lVNv~  103 (113)
T d1pjqa1          78 AATDD---------DT----VN-----QRVSDAAESRRI--FCNVV  103 (113)
T ss_dssp             ECCSC---------HH----HH-----HHHHHHHHHTTC--EEEET
T ss_pred             ecCCC---------HH----HH-----HHHHHHHHHcCC--EEEeC
Confidence            66431         11    11     367778888874  56654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=96.69  E-value=0.002  Score=46.20  Aligned_cols=36  Identities=22%  Similarity=0.330  Sum_probs=29.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      ||+|.|+|+||-||....+-+.+.-.. ++|.++.-.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~-f~v~~Lsa~   36 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEH-FRVVALVAG   36 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTT-EEEEEEEES
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCC-cEEEEEEec
Confidence            689999999999999999988776444 888877654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.63  E-value=0.0061  Score=45.07  Aligned_cols=73  Identities=12%  Similarity=0.217  Sum_probs=51.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +.+|-|.| .|-+|+.+++.|+++|   ++|++..|++++.+.+.+....... ..+ ..   ...+..+.+..+|.++-
T Consensus         2 ~~nIg~IG-lG~MG~~mA~~L~~~G---~~V~v~dr~~~~~~~l~~~~~~~~~-~~~-a~---~~~~~~~~~~~~~~ii~   72 (176)
T d2pgda2           2 QADIALIG-LAVMGQNLILNMNDHG---FVVCAFNRTVSKVDDFLANEAKGTK-VLG-AH---SLEEMVSKLKKPRRIIL   72 (176)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTT---CCEEEECSSTHHHHHHHHTTTTTSS-CEE-CS---SHHHHHHHBCSSCEEEE
T ss_pred             CCcEEEEe-EhHHHHHHHHHHHHCC---CeEEEEcCCHHHHHHHHHhcccccc-ccc-hh---hhhhhhhhhcccceEEE
Confidence            46899999 7999999999999999   8899999998888777654321111 011 12   23444554458899887


Q ss_pred             CC
Q 020880           83 CA   84 (320)
Q Consensus        83 ~a   84 (320)
                      +.
T Consensus        73 ~~   74 (176)
T d2pgda2          73 LV   74 (176)
T ss_dssp             CS
T ss_pred             ec
Confidence            64

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.0042  Score=45.70  Aligned_cols=100  Identities=15%  Similarity=0.231  Sum_probs=60.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH-Hh-CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL-KF-GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~-~~~d~V   80 (320)
                      +.+|+|.|+ |-+|...+..+...|.  .+|++..+++.+.+.. .+++.. .++..+-.+.....+.++ .. .++|+|
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~--~~Vi~~d~~~~rl~~a-~~~Ga~-~~~~~~~~~~~~~~~~~~~~~g~g~Dvv  101 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGA--AQVVVTDLSATRLSKA-KEIGAD-LVLQISKESPQEIARKVEGQLGCKPEVT  101 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEESCHHHHHHH-HHTTCS-EEEECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCC--ceEEeccCCHHHHHHH-HHhCCc-ccccccccccccccccccccCCCCceEE
Confidence            468999986 9999999999999993  2788888886655433 333322 112222223222222222 11 368999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEee
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS  127 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~S  127 (320)
                      |.+.|..          ..        +...++.++..|  ++++++
T Consensus       102 id~~G~~----------~~--------~~~a~~~~~~gG--~iv~~G  128 (171)
T d1pl8a2         102 IECTGAE----------AS--------IQAGIYATRSGG--TLVLVG  128 (171)
T ss_dssp             EECSCCH----------HH--------HHHHHHHSCTTC--EEEECS
T ss_pred             EeccCCc----------hh--------HHHHHHHhcCCC--EEEEEe
Confidence            9998731          01        135566666665  788876

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.00081  Score=50.82  Aligned_cols=40  Identities=23%  Similarity=0.345  Sum_probs=35.3

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ   44 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~   44 (320)
                      |+.+||.|.|| |.+|+.++..++..|   ++|+..+++++..+
T Consensus         2 ~~IkkvaViGa-G~mG~~iA~~~a~~G---~~V~l~D~~~~~l~   41 (192)
T d1f0ya2           2 IIVKHVTVIGG-GLMGAGIAQVAAATG---HTVVLVDQTEDILA   41 (192)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSCHHHHH
T ss_pred             ceeEEEEEECc-CHHHHHHHHHHHhCC---CcEEEEECChHHHH
Confidence            66789999995 999999999999999   89999999876543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.57  E-value=0.0012  Score=49.69  Aligned_cols=101  Identities=15%  Similarity=0.207  Sum_probs=60.5

Q ss_pred             cEEEE-EcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhh---hhCCCcceEEEeeCCCcccH----HHHHHHh-
Q 020880            4 KRVLV-VGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL---DALPHSFVFFDVDLKSGSGF----DAVALKF-   74 (320)
Q Consensus         4 ~~ilI-tGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~----~~~~~~~-   74 (320)
                      .+++| +||+|-+|+..++.....|   .+|++++|+.+..+...   ..++.. ..+.-|-.+...+    .+..... 
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~G---a~vI~~v~~~~~~~~~~~~~~~lGad-~vi~~~~~~~~~~~~~v~~~~~~~g  105 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLLN---FNSISVIRDRPNLDEVVASLKELGAT-QVITEDQNNSREFGPTIKEWIKQSG  105 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHHT---CEEEEEECCCTTHHHHHHHHHHHTCS-EEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhcC---CeEEEEEecccccchHHhhhhhcccc-EEEeccccchhHHHHHHHHHHhhcc
Confidence            46677 6999999999999999999   89999998876654332   222221 1122221122222    2222211 


Q ss_pred             CCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        75 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      .++|+|+++.|...                   +...++.++..|  ++|.+++.
T Consensus       106 ~~vdvv~D~vg~~~-------------------~~~~~~~l~~~G--~~v~~G~~  139 (189)
T d1gu7a2         106 GEAKLALNCVGGKS-------------------STGIARKLNNNG--LMLTYGGM  139 (189)
T ss_dssp             CCEEEEEESSCHHH-------------------HHHHHHTSCTTC--EEEECCCC
T ss_pred             CCceEEEECCCcch-------------------hhhhhhhhcCCc--EEEEECCc
Confidence            36899999876210                   025566666666  78877643

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.57  E-value=0.0022  Score=46.36  Aligned_cols=44  Identities=20%  Similarity=0.336  Sum_probs=37.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL   50 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~   50 (320)
                      |||.+.| +|-+|+++++.|++.|.  ++|++..|++++.+.+.+.+
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~--~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGG--YRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCS--CEEEEECSSHHHHHHHHHHT
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCC--CcEEEEeCChhHHHHhhhhc
Confidence            5799998 59999999999998875  78999999987777776654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.38  E-value=0.0013  Score=48.05  Aligned_cols=35  Identities=29%  Similarity=0.535  Sum_probs=27.9

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH   38 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r   38 (320)
                      +.+||.|.|++|-+|+.+++.+.+...  +++.+..-
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~--~~lv~~~~   37 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEG--VQLGAALE   37 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTT--EECCCEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC--CEEEEEEe
Confidence            357999999999999999999987643  67665443

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.37  E-value=0.0039  Score=47.03  Aligned_cols=63  Identities=22%  Similarity=0.120  Sum_probs=45.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +++|.|.| .|-||+.+++.|..-|   .+|++.++........ .            ....+++.+++.   .+|+|+.
T Consensus        43 gk~vgIiG-~G~IG~~va~~l~~fg---~~V~~~d~~~~~~~~~-~------------~~~~~~l~~~l~---~sDii~~  102 (197)
T d1j4aa1          43 DQVVGVVG-TGHIGQVFMQIMEGFG---AKVITYDIFRNPELEK-K------------GYYVDSLDDLYK---QADVISL  102 (197)
T ss_dssp             GSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSCCHHHHH-T------------TCBCSCHHHHHH---HCSEEEE
T ss_pred             CCeEEEec-ccccchhHHHhHhhhc---ccccccCccccccccc-c------------eeeecccccccc---ccccccc
Confidence            68999999 8999999999999888   8998887764432111 1            112345777887   6898776


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +..
T Consensus       103 ~~p  105 (197)
T d1j4aa1         103 HVP  105 (197)
T ss_dssp             CSC
T ss_pred             cCC
Confidence            654

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=96.32  E-value=0.0038  Score=44.66  Aligned_cols=36  Identities=28%  Similarity=0.426  Sum_probs=29.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      +|+|.|+|+||-||....+-+.+.-.. ++|.++.-.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~-f~v~~lsa~   37 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDR-YQVIALTAN   37 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGG-EEEEEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCC-cEEEEEEeC
Confidence            589999999999999999988765333 888877655

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.27  E-value=0.011  Score=43.57  Aligned_cols=35  Identities=14%  Similarity=0.277  Sum_probs=29.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      |-||.|-| .|-||+.+++.|.++..  .+|++.....
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~d--ievVaInd~~   35 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPD--MKLVGVAKTS   35 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTT--EEEEEEECSS
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCC--CEEEEEECCC
Confidence            56899999 89999999999998764  7888776543

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.25  E-value=0.0093  Score=43.95  Aligned_cols=77  Identities=10%  Similarity=0.042  Sum_probs=49.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCC-cccHHHHHHHh--CCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS-GSGFDAVALKF--GQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~--~~~d~   79 (320)
                      +.+|+|.|+. -+|...+..+...|.  ..|++..+++++.+...+ ++.  . ...|..+ .+.+.+..+..  +++|+
T Consensus        29 GdtVlV~GaG-G~G~~~~~~~~~~g~--~~Vi~~~~~~~k~~~a~~-~Ga--~-~~i~~~~~~~~~~~~~~~~~~~G~D~  101 (176)
T d2jhfa2          29 GSTCAVFGLG-GVGLSVIMGCKAAGA--ARIIGVDINKDKFAKAKE-VGA--T-ECVNPQDYKKPIQEVLTEMSNGGVDF  101 (176)
T ss_dssp             TCEEEEECCS-HHHHHHHHHHHHTTC--SEEEEECSCGGGHHHHHH-TTC--S-EEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCEEEEECCC-CcHHHHHHHHHHcCC--ceEEeecCcHHHHHHHHH-hCC--e-eEEecCCchhHHHHHHHHHhcCCCCE
Confidence            4689999985 589999999988874  578888888776554433 321  1 1222222 23344444332  47999


Q ss_pred             EEECCCc
Q 020880           80 VVNCAAL   86 (320)
Q Consensus        80 Vih~a~~   86 (320)
                      +|.+.|.
T Consensus       102 vid~~G~  108 (176)
T d2jhfa2         102 SFEVIGR  108 (176)
T ss_dssp             EEECSCC
T ss_pred             EEecCCc
Confidence            9999874

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.23  E-value=0.027  Score=36.14  Aligned_cols=69  Identities=19%  Similarity=0.157  Sum_probs=48.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |||.+.|-.|-==+.|++.|+++|   +.|.+-++...+....++..+  +.+..+  .+++.+       .++|.||..
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G---~~VsGSD~~~~~~t~~L~~~G--i~i~~g--h~~~~i-------~~~d~vV~S   67 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNG---NDVYGSNIEETERTAYLRKLG--IPIFVP--HSADNW-------YDPDLVIKT   67 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSSCCHHHHHHHHTT--CCEESS--CCTTSC-------CCCSEEEEC
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCC---CeEEEEeCCCChhHHHHHHCC--CeEEee--eccccc-------CCCCEEEEe
Confidence            689999876666568999999999   899999998766555555543  443332  222222       278999987


Q ss_pred             CCc
Q 020880           84 AAL   86 (320)
Q Consensus        84 a~~   86 (320)
                      .+.
T Consensus        68 sAI   70 (89)
T d1j6ua1          68 PAV   70 (89)
T ss_dssp             TTC
T ss_pred             cCc
Confidence            765

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.23  E-value=0.0037  Score=43.65  Aligned_cols=70  Identities=14%  Similarity=0.119  Sum_probs=51.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      |.|+|.| .|-+|+.+++.|.  +   ..|..+..+++....+..   .++.++.+|.++++.++++-  +.+++.++-+
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~---~~i~vi~~d~~~~~~~~~---~~~~~i~Gd~~~~~~L~~a~--i~~A~~vi~~   69 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--G---SEVFVLAEDENVRKKVLR---SGANFVHGDPTRVSDLEKAN--VRGARAVIVN   69 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--G---GGEEEEESCTTHHHHHHH---TTCEEEESCTTSHHHHHHTT--CTTCSEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--C---CCCEEEEcchHHHHHHHh---cCccccccccCCHHHHHHhh--hhcCcEEEEe
Confidence            5689998 5889999999995  4   445666777666555433   36788999999998776642  2478898865


Q ss_pred             C
Q 020880           84 A   84 (320)
Q Consensus        84 a   84 (320)
                      .
T Consensus        70 ~   70 (129)
T d2fy8a1          70 L   70 (129)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.19  E-value=0.0093  Score=37.21  Aligned_cols=52  Identities=19%  Similarity=0.229  Sum_probs=39.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS   63 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d   63 (320)
                      ||+|.|.| +|.+|+-++..-..-|   +++..++-.++......     ...++.++..+
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG---~~v~vldp~~~~pa~~~-----a~dvIT~e~E~   52 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLG---IAVWPVGLDAEPAAVPF-----QQSVITAEIER   52 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGT---EEEEEECTTSCGGGSCG-----GGSEEEESSSC
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcC---CEEEEEcCCCCCccccc-----ccceEEEeecc
Confidence            58999999 7999999999999999   89988887765443222     22346666654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.14  E-value=0.0084  Score=44.95  Aligned_cols=67  Identities=15%  Similarity=0.122  Sum_probs=47.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+++|.|.| .|-||+.+++.|..-|   .+|.+..+..........           ++...+++.+++.   .+|+|+
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~~~~~~~~-----------~~~~~~~l~~ll~---~sD~i~  109 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAFG---FNVLFYDPYLSDGVERAL-----------GLQRVSTLQDLLF---HSDCVT  109 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEECTTSCTTHHHHH-----------TCEECSSHHHHHH---HCSEEE
T ss_pred             eCceEEEec-cccccccceeeeeccc---cceeeccCcccccchhhh-----------ccccccchhhccc---cCCEEE
Confidence            368999999 8999999999999999   899988886543221111           1112335777787   689877


Q ss_pred             ECCCc
Q 020880           82 NCAAL   86 (320)
Q Consensus        82 h~a~~   86 (320)
                      .+...
T Consensus       110 ~~~pl  114 (193)
T d1mx3a1         110 LHCGL  114 (193)
T ss_dssp             ECCCC
T ss_pred             Eeecc
Confidence            65543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.07  E-value=0.0016  Score=48.51  Aligned_cols=43  Identities=26%  Similarity=0.346  Sum_probs=38.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL   50 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~   50 (320)
                      |||-|.| .|-+|+.+++.|+++|   ++|++.+|++++...+.+..
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G---~~V~~~dr~~~~~~~l~~~~   44 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKG---FKVAVFNRTYSKSEEFMKAN   44 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTT---CCEEEECSSHHHHHHHHHHT
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCC---CeEEEEECCHHHHHHHHHcC
Confidence            5799999 8999999999999999   88999999988887776654

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.06  E-value=0.016  Score=43.26  Aligned_cols=94  Identities=19%  Similarity=0.124  Sum_probs=59.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .++|.|.| .|.||+.+++.|..-|   .+|....+.......       ..  ..     .++++++++   .+|+|+-
T Consensus        44 ~~~vgiiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~~~~~-------~~--~~-----~~~l~ell~---~sDii~i  102 (188)
T d1sc6a1          44 GKKLGIIG-YGHIGTQLGILAESLG---MYVYFYDIENKLPLG-------NA--TQ-----VQHLSDLLN---MSDVVSL  102 (188)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSCCCCCT-------TC--EE-----CSCHHHHHH---HCSEEEE
T ss_pred             ceEEEEee-cccchhhhhhhccccc---ceEeeccccccchhh-------hh--hh-----hhhHHHHHh---hccceee
Confidence            57899998 8999999999999888   899988876432211       00  11     135777887   6899876


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhhh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY  132 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~vy  132 (320)
                      +.......           .++..  ...++.+++..  -+|.+|-..+.
T Consensus       103 ~~plt~~T-----------~~li~--~~~l~~mk~~a--~lIN~aRG~lv  137 (188)
T d1sc6a1         103 HVPENPST-----------KNMMG--AKEISLMKPGS--LLINASRGTVV  137 (188)
T ss_dssp             CCCSSTTT-----------TTCBC--HHHHHHSCTTE--EEEECSCSSSB
T ss_pred             cccCCcch-----------hhhcc--HHHHhhCCCCC--EEEEcCcHHhh
Confidence            65443211           12222  25666665433  56777665543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.05  E-value=0.0037  Score=46.49  Aligned_cols=74  Identities=14%  Similarity=0.078  Sum_probs=46.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC--hhhhhhhCC-Cc--ceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL--PQLLLDALP-HS--FVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~--~~~~~~~~~-~~--~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      |||.|.| +|-.|++++..|.++|   ++|....|..++  ...+..... ..  ......++.-.+++.++++   ++|
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g---~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~ad   73 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNG---NEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE---NAE   73 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHC---CEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT---TCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHh---ccc
Confidence            6899999 6999999999999999   788888875432  222211110 00  0001112222345666665   899


Q ss_pred             EEEECC
Q 020880           79 VVVNCA   84 (320)
Q Consensus        79 ~Vih~a   84 (320)
                      +||.+.
T Consensus        74 ~Ii~av   79 (180)
T d1txga2          74 VVLLGV   79 (180)
T ss_dssp             EEEECS
T ss_pred             hhhccc
Confidence            998764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.85  E-value=0.032  Score=41.52  Aligned_cols=67  Identities=13%  Similarity=0.080  Sum_probs=46.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .+++.|.| .|-||+.+++.|..-|   .+|....+............          ....+++.++++   .+|+|+-
T Consensus        47 g~tvgIiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~~~~~~~~~~----------~~~~~~l~~ll~---~sD~v~l  109 (191)
T d1gdha1          47 NKTLGIYG-FGSIGQALAKRAQGFD---MDIDYFDTHRASSSDEASYQ----------ATFHDSLDSLLS---VSQFFSL  109 (191)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEECSSCCCHHHHHHHT----------CEECSSHHHHHH---HCSEEEE
T ss_pred             ccceEEee-cccchHHHHHHHHhhc---cccccccccccccchhhccc----------ccccCCHHHHHh---hCCeEEe
Confidence            68999999 8999999999999989   89988887655433222110          111235777887   6899876


Q ss_pred             CCCc
Q 020880           83 CAAL   86 (320)
Q Consensus        83 ~a~~   86 (320)
                      +...
T Consensus       110 ~~pl  113 (191)
T d1gdha1         110 NAPS  113 (191)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence            5543

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=95.80  E-value=0.035  Score=40.47  Aligned_cols=34  Identities=18%  Similarity=0.374  Sum_probs=28.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      |++|.|-| .|-||+.+++.|.+++.  .+|++....
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~d--i~vvaInd~   34 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDD--MKVIGVSKT   34 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSS--EEEEEEEES
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCC--ceEEEEecC
Confidence            68999998 89999999999988765  777766544

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.80  E-value=0.03  Score=41.93  Aligned_cols=113  Identities=12%  Similarity=0.014  Sum_probs=62.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      +.+|+|.|+ |-||...+..+...|.  ..|++.++++++.+. ...++  .. ...|-.+.+...++.+..  .++|++
T Consensus        26 G~tVlV~Ga-G~vGl~a~~~ak~~ga--~~Vi~~d~~~~rl~~-a~~~G--a~-~~~~~~~~~~~~~i~~~t~g~g~D~v   98 (195)
T d1kola2          26 GSTVYVAGA-GPVGLAAAASARLLGA--AVVIVGDLNPARLAH-AKAQG--FE-IADLSLDTPLHEQIAALLGEPEVDCA   98 (195)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEESCHHHHHH-HHHTT--CE-EEETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhhcc--cceeeecccchhhHh-hhhcc--cc-EEEeCCCcCHHHHHHHHhCCCCcEEE
Confidence            568999985 9999888888877773  477777777654433 33333  22 233444443333333322  268999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEee
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS  127 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~S  127 (320)
                      |.+.|.-...   .............++...++.++..|  +++.++
T Consensus        99 id~vG~~~~~---~~~~~~~~~~~~~~l~~~~~~~r~gG--~v~~~G  140 (195)
T d1kola2          99 VDAVGFEARG---HGHEGAKHEAPATVLNSLMQVTRVAG--KIGIPG  140 (195)
T ss_dssp             EECCCTTCBC---SSTTGGGSBCTTHHHHHHHHHEEEEE--EEEECS
T ss_pred             EECccccccC---CcccceeecCcHHHHHHHHHHHhcCC--EEEEee
Confidence            9998742111   01111111111122335556566666  777766

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.77  E-value=0.046  Score=35.57  Aligned_cols=70  Identities=13%  Similarity=0.082  Sum_probs=46.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +|+|.+.|..|--=+.||+.|.++|   ++|.+.++...+....+...  ++.+..+.  +++.    +.   ++|.||.
T Consensus         8 ~~~ihfiGigG~GMs~LA~~L~~~G---~~VsGSD~~~~~~~~~L~~~--Gi~v~~g~--~~~~----i~---~~d~vV~   73 (96)
T d1p3da1           8 VQQIHFIGIGGAGMSGIAEILLNEG---YQISGSDIADGVVTQRLAQA--GAKIYIGH--AEEH----IE---GASVVVV   73 (96)
T ss_dssp             CCEEEEETTTSTTHHHHHHHHHHHT---CEEEEEESCCSHHHHHHHHT--TCEEEESC--CGGG----GT---TCSEEEE
T ss_pred             CCEEEEEEECHHHHHHHHHHHHhCC---CEEEEEeCCCChhhhHHHHC--CCeEEECC--cccc----CC---CCCEEEE
Confidence            5799999855544488999999999   89999999866554444443  34433322  2221    22   7899987


Q ss_pred             CCCc
Q 020880           83 CAAL   86 (320)
Q Consensus        83 ~a~~   86 (320)
                      ..+.
T Consensus        74 S~AI   77 (96)
T d1p3da1          74 SSAI   77 (96)
T ss_dssp             CTTS
T ss_pred             CCCc
Confidence            7664

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.63  E-value=0.04  Score=40.77  Aligned_cols=65  Identities=20%  Similarity=0.126  Sum_probs=45.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      ++++.|.| .|-||+.+++.|..-|   .+|++..+...+......    .+.        ..++++++.   .+|+|+-
T Consensus        44 ~k~vgiiG-~G~IG~~va~~~~~fg---~~v~~~d~~~~~~~~~~~----~~~--------~~~l~ell~---~sDiv~~  104 (184)
T d1ygya1          44 GKTVGVVG-LGRIGQLVAQRIAAFG---AYVVAYDPYVSPARAAQL----GIE--------LLSLDDLLA---RADFISV  104 (184)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEECTTSCHHHHHHH----TCE--------ECCHHHHHH---HCSEEEE
T ss_pred             ceeeeecc-ccchhHHHHHHhhhcc---ceEEeecCCCChhHHhhc----Cce--------eccHHHHHh---hCCEEEE
Confidence            57888888 8999999999999888   899988877554332211    111        124667787   6899776


Q ss_pred             CCCc
Q 020880           83 CAAL   86 (320)
Q Consensus        83 ~a~~   86 (320)
                      +...
T Consensus       105 ~~Pl  108 (184)
T d1ygya1         105 HLPK  108 (184)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence            5543

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.58  E-value=0.023  Score=41.66  Aligned_cols=77  Identities=12%  Similarity=0.110  Sum_probs=47.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCC-CcccHHHHHHHh--CCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK-SGSGFDAVALKF--GQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~--~~~d~   79 (320)
                      +.+|+|.|+ |-+|...++.+...|.  ..|++..+++++. .+...++..   ...|.. +.+.+.+..+..  .++|+
T Consensus        29 G~tVlI~Ga-GGvG~~aiq~ak~~G~--~~vi~~~~~~~k~-~~ak~lGa~---~~i~~~~~~~~~~~~~~~~~~~g~D~  101 (176)
T d2fzwa2          29 GSVCAVFGL-GGVGLAVIMGCKVAGA--SRIIGVDINKDKF-ARAKEFGAT---ECINPQDFSKPIQEVLIEMTDGGVDY  101 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSCGGGH-HHHHHHTCS---EEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCEEEEecc-hhHHHHHHHHHHHHhc--CceEEEcccHHHH-HHHHHhCCc---EEEeCCchhhHHHHHHHHHcCCCCcE
Confidence            468999997 5689999999999984  3566666665554 333444322   122332 233444444432  37999


Q ss_pred             EEECCCc
Q 020880           80 VVNCAAL   86 (320)
Q Consensus        80 Vih~a~~   86 (320)
                      ||.+.|.
T Consensus       102 vid~~G~  108 (176)
T d2fzwa2         102 SFECIGN  108 (176)
T ss_dssp             EEECSCC
T ss_pred             eeecCCC
Confidence            9999873

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.56  E-value=0.042  Score=40.11  Aligned_cols=77  Identities=13%  Similarity=0.255  Sum_probs=45.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh-hhhhhhCCCcceEEEee-----------CCCcccHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP-QLLLDALPHSFVFFDVD-----------LKSGSGFDAV   70 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~D-----------l~d~~~~~~~   70 (320)
                      ++||.|-| .|-||+.+++.|.++..  .++++.....+.. ...+...  .+..+..+           +.....+.++
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~d--ieiVaINd~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQDD--MELIGITKTKPDFEAYRAKEL--GIPVYAASEEFIPRFEKEGFEVAGTLNDL   76 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTT--EEEEEEEESSCSHHHHHHHHT--TCCEEESSGGGHHHHHHHTCCCSCBHHHH
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCCC--ceEEEEecCCChHHHHHhhhc--CceeecccccceeeecccCccccchhhhh
Confidence            47899999 79999999999987654  7777665432222 1222221  11212211           1112234444


Q ss_pred             HHHhCCCCEEEECCCcc
Q 020880           71 ALKFGQPDVVVNCAALS   87 (320)
Q Consensus        71 ~~~~~~~d~Vih~a~~~   87 (320)
                      .+   ++|+|+-|.|.+
T Consensus        77 ~~---~vDvViEcTG~f   90 (172)
T d2czca2          77 LE---KVDIIVDATPGG   90 (172)
T ss_dssp             HT---TCSEEEECCSTT
T ss_pred             hc---cCCEEEECCCCC
Confidence            33   899999998864

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.51  E-value=0.0082  Score=43.50  Aligned_cols=73  Identities=10%  Similarity=0.164  Sum_probs=58.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEEC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNC   83 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih~   83 (320)
                      -+|+|.| .|-.|..-++.....|   ..|.+++.+.+..+++...++..++.   -..+.+.+.+.+.   ++|+||.+
T Consensus        33 a~V~ViG-aGvaG~~A~~~A~~lG---A~V~~~D~~~~~l~~l~~~~~~~~~~---~~~~~~~l~~~~~---~aDivI~a  102 (168)
T d1pjca1          33 GKVVILG-GGVVGTEAAKMAVGLG---AQVQIFDINVERLSYLETLFGSRVEL---LYSNSAEIETAVA---EADLLIGA  102 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHGGGSEE---EECCHHHHHHHHH---TCSEEEEC
T ss_pred             cEEEEEC-CChHHHHHHHHHhhCC---CEEEEEeCcHHHHHHHHHhhccccee---ehhhhhhHHHhhc---cCcEEEEe
Confidence            4899999 6999999999999999   89999999988777776665555443   3445566777776   89999998


Q ss_pred             CCc
Q 020880           84 AAL   86 (320)
Q Consensus        84 a~~   86 (320)
                      +-.
T Consensus       103 ali  105 (168)
T d1pjca1         103 VLV  105 (168)
T ss_dssp             CCC
T ss_pred             eec
Confidence            865

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.51  E-value=0.032  Score=41.91  Aligned_cols=62  Identities=21%  Similarity=0.185  Sum_probs=44.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +++|.|.| .|-||+.+++.|..-|   .+|++..+.......      ..+        +..++.+++.   .+|+|+.
T Consensus        45 ~ktvgIiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~~~~~------~~~--------~~~~l~~l~~---~~D~v~~  103 (199)
T d1dxya1          45 QQTVGVMG-TGHIGQVAIKLFKGFG---AKVIAYDPYPMKGDH------PDF--------DYVSLEDLFK---QSDVIDL  103 (199)
T ss_dssp             GSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSCCSSCC------TTC--------EECCHHHHHH---HCSEEEE
T ss_pred             ceeeeeee-cccccccccccccccc---eeeeccCCccchhhh------cch--------hHHHHHHHHH---hccccee
Confidence            57999999 8999999999999888   899998886543211      111        1224667777   6898776


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +.-
T Consensus       104 ~~p  106 (199)
T d1dxya1         104 HVP  106 (199)
T ss_dssp             CCC
T ss_pred             eec
Confidence            543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.45  E-value=0.031  Score=41.57  Aligned_cols=67  Identities=18%  Similarity=0.142  Sum_probs=46.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      .+++.|.| .|-||+.+++.|..-|   .+|....+...........          .+....++.++++   ++|+|+-
T Consensus        44 ~~~vgiiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~~~~~~~~~----------~~~~~~~l~~~l~---~sD~v~~  106 (188)
T d2naca1          44 AMHVGTVA-AGRIGLAVLRRLAPFD---VHLHYTDRHRLPESVEKEL----------NLTWHATREDMYP---VCDVVTL  106 (188)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHGGGT---CEEEEECSSCCCHHHHHHH----------TCEECSSHHHHGG---GCSEEEE
T ss_pred             ccceeecc-ccccchhhhhhhhccC---ceEEEEeeccccccccccc----------cccccCCHHHHHH---hccchhh
Confidence            57899999 8999999999999988   8999998875443322221          0112334566666   7899866


Q ss_pred             CCCc
Q 020880           83 CAAL   86 (320)
Q Consensus        83 ~a~~   86 (320)
                      +...
T Consensus       107 ~~pl  110 (188)
T d2naca1         107 NCPL  110 (188)
T ss_dssp             CSCC
T ss_pred             cccc
Confidence            5543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.33  E-value=0.00092  Score=49.80  Aligned_cols=72  Identities=11%  Similarity=0.160  Sum_probs=47.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC-----CcceEE-EeeCCCcccHHHHHHHhC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-----HSFVFF-DVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~-----~~~~~~-~~Dl~d~~~~~~~~~~~~   75 (320)
                      .+|+|+|.| +|-.++.++..|.+.|    +|+...|+.++.+.+.+.+.     .....+ ..|+.+      ..   .
T Consensus        17 ~~k~vlIlG-aGG~arai~~aL~~~~----~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~------~~---~   82 (177)
T d1nvta1          17 KDKNIVIYG-AGGAARAVAFELAKDN----NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDV------DL---D   82 (177)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHTSSS----EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTC------CC---T
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHcccc----ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhh------cc---c
Confidence            368999999 5778999999987654    78899999877766654331     111111 122222      12   2


Q ss_pred             CCCEEEECCCcc
Q 020880           76 QPDVVVNCAALS   87 (320)
Q Consensus        76 ~~d~Vih~a~~~   87 (320)
                      .+|.|||+....
T Consensus        83 ~~dliIn~tp~g   94 (177)
T d1nvta1          83 GVDIIINATPIG   94 (177)
T ss_dssp             TCCEEEECSCTT
T ss_pred             hhhhhccCCccc
Confidence            789999987654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.20  E-value=0.0078  Score=43.45  Aligned_cols=67  Identities=19%  Similarity=0.236  Sum_probs=46.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+++|.| +|.||+.+++.|...|   .+|......+-  ..+...+ ..+.        ...+++++.   ..|+|+
T Consensus        23 ~Gk~v~V~G-yG~iG~g~A~~~rg~G---~~V~v~e~dp~--~al~A~~-dG~~--------v~~~~~a~~---~adivv   84 (163)
T d1li4a1          23 AGKVAVVAG-YGDVGKGCAQALRGFG---ARVIITEIDPI--NALQAAM-EGYE--------VTTMDEACQ---EGNIFV   84 (163)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCHH--HHHHHHH-TTCE--------ECCHHHHTT---TCSEEE
T ss_pred             cCCEEEEec-cccccHHHHHHHHhCC---CeeEeeecccc--hhHHhhc-CceE--------eeehhhhhh---hccEEE
Confidence            478999999 9999999999999999   89988888642  2232222 1121        112444554   678888


Q ss_pred             ECCCc
Q 020880           82 NCAAL   86 (320)
Q Consensus        82 h~a~~   86 (320)
                      -+.|-
T Consensus        85 taTGn   89 (163)
T d1li4a1          85 TTTGC   89 (163)
T ss_dssp             ECSSC
T ss_pred             ecCCC
Confidence            77664

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=95.15  E-value=0.053  Score=39.64  Aligned_cols=77  Identities=17%  Similarity=0.175  Sum_probs=49.0

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCC-cccHHHHHHHh--CCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS-GSGFDAVALKF--GQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~--~~~d~   79 (320)
                      +.+|+|.| .|-||...++.+...|.  ..|++..+++++. .+.+.++.. .  ..|... .+......+..  +++|+
T Consensus        29 G~~VlV~G-~G~iGl~a~~~ak~~Ga--~~Vi~~d~~~~r~-~~a~~~Ga~-~--~i~~~~~~~~~~~~~~~~~~~G~d~  101 (174)
T d1e3ia2          29 GSTCAVFG-LGCVGLSAIIGCKIAGA--SRIIAIDINGEKF-PKAKALGAT-D--CLNPRELDKPVQDVITELTAGGVDY  101 (174)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTC--SEEEEECSCGGGH-HHHHHTTCS-E--EECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCEEEEEC-CChHHHHHHHHHHHhCC--ceeeeeccchHHH-HHHHHhCCC-c--ccCCccchhhhhhhHhhhhcCCCcE
Confidence            46899998 59999999999999993  3677777776554 344444322 1  223222 22333333221  48999


Q ss_pred             EEECCCc
Q 020880           80 VVNCAAL   86 (320)
Q Consensus        80 Vih~a~~   86 (320)
                      ||.|.|.
T Consensus       102 vie~~G~  108 (174)
T d1e3ia2         102 SLDCAGT  108 (174)
T ss_dssp             EEESSCC
T ss_pred             EEEeccc
Confidence            9999874

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.14  E-value=0.033  Score=40.37  Aligned_cols=75  Identities=20%  Similarity=0.122  Sum_probs=48.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +.+|+|.|+ |-||...+..+...|   .+|++.++++++.... +.++  .. ...|..+.+....+.+...+.+.+|-
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g---~~v~~~~~~~~r~~~~-k~~G--a~-~~~~~~~~~~~~~~~~~~~~~~~~v~   99 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMG---LNVVAVDIGDEKLELA-KELG--AD-LVVNPLKEDAAKFMKEKVGGVHAAVV   99 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTT---CEEEEECSCHHHHHHH-HHTT--CS-EEECTTTSCHHHHHHHHHSSEEEEEE
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCC---CeEeccCCCHHHhhhh-hhcC--cc-eecccccchhhhhcccccCCCceEEe
Confidence            468999975 889999999999889   7899998887665443 3333  22 33455554433333333346666666


Q ss_pred             CCC
Q 020880           83 CAA   85 (320)
Q Consensus        83 ~a~   85 (320)
                      +++
T Consensus       100 ~~~  102 (168)
T d1rjwa2         100 TAV  102 (168)
T ss_dssp             SSC
T ss_pred             ecC
Confidence            654

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.13  E-value=0.012  Score=42.55  Aligned_cols=74  Identities=15%  Similarity=0.254  Sum_probs=40.1

Q ss_pred             CCC-cEEEEEcCCChhhHHHHHHHhhccCCCceEEEe-cCCCCChh-hhhhhCCCcceEEEeeCCCcccHHHHHH--HhC
Q 020880            1 MSK-KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQ-LLLDALPHSFVFFDVDLKSGSGFDAVAL--KFG   75 (320)
Q Consensus         1 m~~-~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~~   75 (320)
                      |++ .|+.|.| +|.||+.+...++++... .+++++ +|+++... ...+..  ++.+..   .   .++++.+  .+.
T Consensus         1 M~kkirvaIIG-aG~ig~~~~~~~l~~~~~-~el~avas~~~~~~~~~~a~~~--~i~~~~---~---~~d~l~~~~~~~   70 (157)
T d1nvmb1           1 MNQKLKVAIIG-SGNIGTDLMIKVLRNAKY-LEMGAMVGIDAASDGLARAQRM--GVTTTY---A---GVEGLIKLPEFA   70 (157)
T ss_dssp             CCSCEEEEEEC-CSHHHHHHHHHHHHHCSS-EEEEEEECSCTTCHHHHHHHHT--TCCEES---S---HHHHHHHSGGGG
T ss_pred             CCCCcEEEEEc-CcHHHHHHHHHHHhhCCc-ceEEEEEecchhccchhhhhhc--CCcccc---c---ceeeeeeccccc
Confidence            654 5999999 999999755445443222 677766 45544332 233332  222211   1   2233332  123


Q ss_pred             CCCEEEECC
Q 020880           76 QPDVVVNCA   84 (320)
Q Consensus        76 ~~d~Vih~a   84 (320)
                      ++|+||.+.
T Consensus        71 ~iDiVf~AT   79 (157)
T d1nvmb1          71 DIDFVFDAT   79 (157)
T ss_dssp             GEEEEEECS
T ss_pred             ccCEEEEcC
Confidence            789999764

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.09  E-value=0.052  Score=37.10  Aligned_cols=75  Identities=17%  Similarity=0.181  Sum_probs=54.3

Q ss_pred             CcEEEEEcCC----------ChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH
Q 020880            3 KKRVLVVGGT----------GYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         3 ~~~ilItGat----------G~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      .+||||.|+.          -|.+.+.++.|.+.|   ++++.+..+++...--.+. .+   -+..+-...+++.++++
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g---~~~iliN~NP~TVstd~d~-aD---~lYfePlt~e~v~~Ii~   79 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEG---YRVINVNSNPATIMTDPEM-AD---ATYIEPIHWEVVRKIIE   79 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHT---CEEEEECSCTTCGGGCGGG-SS---EEECSCCCHHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcC---CeEEEecCchHhhhcChhh-cc---eeeeecCCHHHHHHHHH
Confidence            4799999973          478999999999999   8888888877664332221 11   14555666777888887


Q ss_pred             HhCCCCEEEECCC
Q 020880           73 KFGQPDVVVNCAA   85 (320)
Q Consensus        73 ~~~~~d~Vih~a~   85 (320)
                      .- ++|.|+-..|
T Consensus        80 ~E-~pd~il~~~G   91 (127)
T d1a9xa3          80 KE-RPDAVLPTMG   91 (127)
T ss_dssp             HH-CCSEEECSSS
T ss_pred             Hh-CcCCeEEEee
Confidence            64 9999985544

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.03  E-value=0.056  Score=39.56  Aligned_cols=77  Identities=9%  Similarity=0.082  Sum_probs=50.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCccc-HHHHHHHh--CCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG-FDAVALKF--GQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~--~~~d~   79 (320)
                      +.+|+|+|+ |-+|...++.+...|.  .+|++.++++++.+.-.+ ++..   ...|..+.+. .....+..  .++|+
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~G~--~~Vi~vd~~~~kl~~Ak~-~GA~---~~in~~~~~~~~~~~~~~~~g~G~d~  102 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSAGA--SRIIGIDLNKDKFEKAMA-VGAT---ECISPKDSTKPISEVLSEMTGNNVGY  102 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGGGHHHHHH-HTCS---EEECGGGCSSCHHHHHHHHHTSCCCE
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCC--ceEEEecCcHHHHHHHHh-cCCc---EEECccccchHHHHHHHHhccccceE
Confidence            468999985 9999999999999984  478999998776654333 3222   2224333332 22222211  47999


Q ss_pred             EEECCCc
Q 020880           80 VVNCAAL   86 (320)
Q Consensus        80 Vih~a~~   86 (320)
                      +|.+.+.
T Consensus       103 vi~~~g~  109 (176)
T d1d1ta2         103 TFEVIGH  109 (176)
T ss_dssp             EEECSCC
T ss_pred             EEEeCCc
Confidence            9999874

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.97  E-value=0.01  Score=44.67  Aligned_cols=68  Identities=22%  Similarity=0.152  Sum_probs=46.1

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+++|.|-| .|-+|+++++.|.+.|   .+|+..+.+......... .  +.+     ..+.+   +++.  ..||+++
T Consensus        26 ~gk~v~IqG-~G~VG~~~A~~L~~~G---akvvv~d~d~~~~~~~~~-~--g~~-----~~~~~---~~~~--~~~DI~i   88 (201)
T d1c1da1          26 DGLTVLVQG-LGAVGGSLASLAAEAG---AQLLVADTDTERVAHAVA-L--GHT-----AVALE---DVLS--TPCDVFA   88 (201)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHH-T--TCE-----ECCGG---GGGG--CCCSEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEecchHHHHHHHHh-h--ccc-----ccCcc---cccc--ccceeee
Confidence            368999999 8999999999999999   888877765443333222 1  111     12222   2344  2899999


Q ss_pred             ECCCc
Q 020880           82 NCAAL   86 (320)
Q Consensus        82 h~a~~   86 (320)
                      -||..
T Consensus        89 PcA~~   93 (201)
T d1c1da1          89 PCAMG   93 (201)
T ss_dssp             ECSCS
T ss_pred             ccccc
Confidence            99853

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=94.90  E-value=0.057  Score=39.45  Aligned_cols=77  Identities=17%  Similarity=0.076  Sum_probs=50.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCccc-HHHHHHHh--CCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG-FDAVALKF--GQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~--~~~d~   79 (320)
                      ..+|+|.|+ |-+|...++.+...|.  .+|++.++++++.+.. ..++.  . ...|..+.+. +.+.....  +++|+
T Consensus        28 G~~VlV~Ga-GgvGl~a~~~ak~~G~--~~Vi~~d~~~~kl~~a-~~lGa--~-~~i~~~~~d~~~~~~~~~~~~~G~d~  100 (174)
T d1p0fa2          28 GSTCAVFGL-GGVGFSAIVGCKAAGA--SRIIGVGTHKDKFPKA-IELGA--T-ECLNPKDYDKPIYEVICEKTNGGVDY  100 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSCGGGHHHH-HHTTC--S-EEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCC--ceeeccCChHHHHHHH-HHcCC--c-EEEcCCCchhHHHHHHHHhcCCCCcE
Confidence            468999995 9999999999999984  4688888877665443 33332  1 2234433332 33333322  37999


Q ss_pred             EEECCCc
Q 020880           80 VVNCAAL   86 (320)
Q Consensus        80 Vih~a~~   86 (320)
                      ||.+.+.
T Consensus       101 vid~~g~  107 (174)
T d1p0fa2         101 AVECAGR  107 (174)
T ss_dssp             EEECSCC
T ss_pred             EEEcCCC
Confidence            9999874

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.88  E-value=0.018  Score=39.51  Aligned_cols=36  Identities=25%  Similarity=0.393  Sum_probs=31.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL   42 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~   42 (320)
                      .++++|.| .||+|-.++..|.++|   .+|+.+.+++..
T Consensus        30 ~~~vvIIG-gG~iG~E~A~~l~~~g---~~Vtli~~~~~~   65 (121)
T d1d7ya2          30 QSRLLIVG-GGVIGLELAATARTAG---VHVSLVETQPRL   65 (121)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSST
T ss_pred             CCeEEEEC-cchhHHHHHHHhhccc---ceEEEEeecccc
Confidence            47899999 6999999999999999   889988888653

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.81  E-value=0.055  Score=39.80  Aligned_cols=73  Identities=16%  Similarity=0.257  Sum_probs=44.4

Q ss_pred             CCCcEEEEEcCCChhhHHH-HHHHhhccCCCceEEEe-cCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCC
Q 020880            1 MSKKRVLVVGGTGYLGQHL-LQGLSEIEGKPYDVAAT-HHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPD   78 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l-~~~L~~~g~~v~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   78 (320)
                      |++.||.|.| +|.+|+.+ +..|.+.+.. ++++++ +++++....+.+.++. .. +.      ++++++++. .++|
T Consensus         1 MkkirigiIG-~G~~g~~~h~~~l~~~~~~-~~i~~v~d~~~~~~~~~~~~~~~-~~-~~------~~~~ell~~-~~id   69 (181)
T d1zh8a1           1 LRKIRLGIVG-CGIAARELHLPALKNLSHL-FEITAVTSRTRSHAEEFAKMVGN-PA-VF------DSYEELLES-GLVD   69 (181)
T ss_dssp             CCCEEEEEEC-CSHHHHHTHHHHHHTTTTT-EEEEEEECSSHHHHHHHHHHHSS-CE-EE------SCHHHHHHS-SCCS
T ss_pred             CCCcEEEEEc-CCHHHHHHHHHHHHhCCCC-eEEEEEEeccHhhhhhhhccccc-cc-ee------eeeeccccc-cccc
Confidence            7777999999 79999864 5666654332 677755 4444445444444321 11 11      246667764 3799


Q ss_pred             EEEECC
Q 020880           79 VVVNCA   84 (320)
Q Consensus        79 ~Vih~a   84 (320)
                      +|+-+.
T Consensus        70 ~v~I~t   75 (181)
T d1zh8a1          70 AVDLTL   75 (181)
T ss_dssp             EEEECC
T ss_pred             eeeccc
Confidence            998653

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.80  E-value=0.012  Score=45.29  Aligned_cols=70  Identities=16%  Similarity=0.103  Sum_probs=48.4

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+++|+|-| .|-+|+++++.|.+.|   ..|+..+.+...........+       .+..+++.   +++  ..||+++
T Consensus        38 ~g~~v~IqG-~GnVG~~~a~~L~~~G---akvv~~d~~~~~~~~~~~~~g-------~~~~~~~~---~~~--~~cDIl~  101 (230)
T d1leha1          38 EGLAVSVQG-LGNVAKALCKKLNTEG---AKLVVTDVNKAAVSAAVAEEG-------ADAVAPNA---IYG--VTCDIFA  101 (230)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHHC-------CEECCGGG---TTT--CCCSEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCC---CEEEeecccHHHHHHHHHhcC-------CcccCCcc---ccc--ccccEec
Confidence            368999999 8999999999999999   888887766544443333221       12223332   233  2899999


Q ss_pred             ECCCcc
Q 020880           82 NCAALS   87 (320)
Q Consensus        82 h~a~~~   87 (320)
                      -||-..
T Consensus       102 PcA~~~  107 (230)
T d1leha1         102 PCALGA  107 (230)
T ss_dssp             ECSCSC
T ss_pred             cccccc
Confidence            998643

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.74  E-value=0.0074  Score=45.02  Aligned_cols=38  Identities=13%  Similarity=0.121  Sum_probs=33.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ   44 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~   44 (320)
                      .+||.|.|| |.+|+.++..++..|   ++|+..+++++..+
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G---~~V~l~D~~~~~l~   41 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKG---TPILMKDINEHGIE   41 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTT---CCEEEECSSHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCC---CeEEEEECCHHHHh
Confidence            478999995 999999999999999   89999999866543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=94.60  E-value=0.019  Score=42.03  Aligned_cols=97  Identities=19%  Similarity=0.040  Sum_probs=59.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHh--CCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKF--GQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~d~V   80 (320)
                      ..+|+|.|+ |-+|...++.+...|.  ..|++..+++++.+... .++. .+  ..|..+ +.++...+..  .++|+|
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~--~~vv~~~~~~~k~~~~~-~~ga-~~--~i~~~~-~~~~~~~~~~~~~g~d~v  104 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTP--ATVIALDVKEEKLKLAE-RLGA-DH--VVDARR-DPVKQVMELTRGRGVNVA  104 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCC--CEEEEEESSHHHHHHHH-HTTC-SE--EEETTS-CHHHHHHHHTTTCCEEEE
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcC--cccccccchhHHHHHHh-hccc-ce--eecCcc-cHHHHHHHhhCCCCceEE
Confidence            468999985 9999999999988884  35666677655444333 3332 12  234333 3455555443  268999


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEee
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS  127 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~S  127 (320)
                      |.++|...          .        +...++.++..|  +++.++
T Consensus       105 id~~g~~~----------~--------~~~a~~~l~~~G--~iv~~G  131 (172)
T d1h2ba2         105 MDFVGSQA----------T--------VDYTPYLLGRMG--RLIIVG  131 (172)
T ss_dssp             EESSCCHH----------H--------HHHGGGGEEEEE--EEEECC
T ss_pred             EEecCcch----------H--------HHHHHHHHhCCC--EEEEEe
Confidence            99987420          0        124555556666  788766

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=94.53  E-value=0.052  Score=40.79  Aligned_cols=74  Identities=15%  Similarity=0.195  Sum_probs=45.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh---------hhhhhhCCCcceEEE-eeCCCcccHHHHHHH
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP---------QLLLDALPHSFVFFD-VDLKSGSGFDAVALK   73 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~---------~~~~~~~~~~~~~~~-~Dl~d~~~~~~~~~~   73 (320)
                      |||++.| ++-.|..+++.|+++|   ++|.++.-.+++.         ..+...  .++.++. .++.+++.+ +.+..
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g---~~I~~Vvt~~~~~~~~~~~~~~~~~a~~--~~i~~~~~~~~~~~~~~-~~i~~   73 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAG---YEISAIFTHTDNPGEKAFYGSVARLAAE--RGIPVYAPDNVNHPLWV-ERIAQ   73 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTT---CEEEEEECCCC------CCCCHHHHHHH--HTCCEECCSCCCSHHHH-HHHHH
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCC---CCEEEEEcCCCCCCcccccCHHHHHHHH--cCCcceecccccchhhh-hhhhh
Confidence            5788887 5667999999999999   6776554332221         111121  2345443 356665544 44555


Q ss_pred             hCCCCEEEECCC
Q 020880           74 FGQPDVVVNCAA   85 (320)
Q Consensus        74 ~~~~d~Vih~a~   85 (320)
                      . ++|++|-+.+
T Consensus        74 ~-~~Dlii~~g~   84 (203)
T d2blna2          74 L-SPDVIFSFYY   84 (203)
T ss_dssp             T-CCSEEEEESC
T ss_pred             h-cccceeeeec
Confidence            4 9999987764

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.48  E-value=0.023  Score=38.58  Aligned_cols=35  Identities=23%  Similarity=0.430  Sum_probs=31.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL   42 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~   42 (320)
                      ++++|.| .|+||-.++..|.+.|   .+|+.+.|.+.-
T Consensus        23 ~~v~IiG-gG~ig~E~A~~l~~~G---~~Vtlve~~~~i   57 (117)
T d1ebda2          23 KSLVVIG-GGYIGIELGTAYANFG---TKVTILEGAGEI   57 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSSS
T ss_pred             CeEEEEC-CCccceeeeeeecccc---cEEEEEEeccee
Confidence            6899999 6999999999999999   899988887643

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.42  E-value=0.025  Score=38.86  Aligned_cols=35  Identities=20%  Similarity=0.393  Sum_probs=30.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP   41 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~   41 (320)
                      .++|+|.| .||+|-.++..|.+.|   .+|+.+.+.+.
T Consensus        30 ~k~vvViG-gG~iG~E~A~~l~~~g---~~Vtlie~~~~   64 (123)
T d1nhpa2          30 VNNVVVIG-SGYIGIEAAEAFAKAG---KKVTVIDILDR   64 (123)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHhhccc---eEEEEEEecCc
Confidence            46899998 6999999999999999   88888878754

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.35  E-value=0.028  Score=38.21  Aligned_cols=35  Identities=20%  Similarity=0.411  Sum_probs=31.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP   41 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~   41 (320)
                      .++|+|.| .|+||-.++..|.+.|   .+|+.+.|.+.
T Consensus        22 p~~v~IiG-gG~iG~E~A~~l~~~g---~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVG-SGYIAVELINVIKRLG---IDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHTTT---CEEEEECSSSS
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhcc---ccceeeehhcc
Confidence            36899999 6999999999999999   89999998754

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.33  E-value=0.028  Score=38.55  Aligned_cols=36  Identities=19%  Similarity=0.366  Sum_probs=31.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL   42 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~   42 (320)
                      .++++|.| +|+||-.++..|.+.|   .+|+.+.|.+..
T Consensus        23 p~~~vIiG-~G~ig~E~A~~l~~lG---~~Vtii~~~~~~   58 (122)
T d1v59a2          23 PKRLTIIG-GGIIGLEMGSVYSRLG---SKVTVVEFQPQI   58 (122)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSSSS
T ss_pred             CCeEEEEC-CCchHHHHHHHHHhhC---cceeEEEecccc
Confidence            36899999 6999999999999999   899998887543

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.32  E-value=0.03  Score=38.75  Aligned_cols=89  Identities=16%  Similarity=0.122  Sum_probs=58.2

Q ss_pred             CcEEEEEcCC---ChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            3 KKRVLVVGGT---GYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         3 ~~~ilItGat---G~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      -++|.|.|||   |-.|..+.+.|++.| . ++|+.+..+.+...        +.. ..-++.|.      -   +.+|.
T Consensus         8 PksIAVVGaS~~~~~~g~~v~~~L~~~~-~-g~v~pVnP~~~~i~--------G~~-~y~sl~dl------p---~~vDl   67 (129)
T d2csua1           8 PKGIAVIGASNDPKKLGYEVFKNLKEYK-K-GKVYPVNIKEEEVQ--------GVK-AYKSVKDI------P---DEIDL   67 (129)
T ss_dssp             CSEEEEETCCSCTTSHHHHHHHHHTTCC-S-SEEEEECSSCSEET--------TEE-CBSSTTSC------S---SCCSE
T ss_pred             CCeEEEEccCCCCCCcHHHHHHHHHHcC-C-CcEEEeccCccccC--------CeE-eecchhhc------C---CCCce
Confidence            4799999999   999999999988765 3 67877655432211        111 12234332      2   27898


Q ss_pred             EEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechh
Q 020880           80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ  130 (320)
Q Consensus        80 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~  130 (320)
                      ++-+...          +..         ..+++.|.+.|++.++.+|+..
T Consensus        68 vvi~vp~----------~~~---------~~~~~~~~~~g~~~~vi~s~Gf   99 (129)
T d2csua1          68 AIIVVPK----------RFV---------KDTLIQCGEKGVKGVVIITAGF   99 (129)
T ss_dssp             EEECSCH----------HHH---------HHHHHHHHHHTCCEEEECCCSS
T ss_pred             EEEecCh----------HHh---------HHHHHHHHHcCCCEEEEecccc
Confidence            8865421          111         3788999999998888887754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.12  E-value=0.031  Score=37.83  Aligned_cols=35  Identities=26%  Similarity=0.320  Sum_probs=31.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL   42 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~   42 (320)
                      ++|+|.| .|++|-.++..|.+.|   .+|+.+.|.+..
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G---~~Vtlve~~~~~   56 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLG---AKTHLFEMFDAP   56 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccc---cEEEEEeecchh
Confidence            6899999 6999999999999999   889988887543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.10  E-value=0.032  Score=38.34  Aligned_cols=35  Identities=20%  Similarity=0.347  Sum_probs=31.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL   42 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~   42 (320)
                      ++++|.| .|+||-.++..|.+.|   .+|+.+.|++..
T Consensus        23 k~vvIvG-gG~iG~E~A~~l~~~G---~~Vtlv~~~~~~   57 (125)
T d3grsa2          23 GRSVIVG-AGYIAVEMAGILSALG---SKTSLMIRHDKV   57 (125)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSSSS
T ss_pred             CEEEEEc-CCccHHHHHHHHhcCC---cEEEEEeecccc
Confidence            6899999 6999999999999999   899999998543

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.09  E-value=0.045  Score=37.02  Aligned_cols=82  Identities=16%  Similarity=0.171  Sum_probs=52.1

Q ss_pred             cEEEEEcCC---ChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            4 KRVLVVGGT---GYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         4 ~~ilItGat---G~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      |+|.|.|+|   |-.|..+.+.|++.|   |+|+.+..+.+..               ..+.-..++.++-+   .+|.+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g---~~V~pVnP~~~~i---------------~G~~~y~sl~~lp~---~~D~v   60 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKG---FEVLPVNPNYDEI---------------EGLKCYRSVRELPK---DVDVI   60 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTT---CEEEEECTTCSEE---------------TTEECBSSGGGSCT---TCCEE
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCC---CEEEEEccccccc---------------cCccccccchhccc---cceEE
Confidence            689999988   789999999999999   8888664332211               11111122333332   67888


Q ss_pred             EECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEE
Q 020880           81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH  125 (320)
Q Consensus        81 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~  125 (320)
                      +-+...          +..         ..+++.|.+.|++.+++
T Consensus        61 vi~vp~----------~~~---------~~~l~~~~~~g~k~v~~   86 (116)
T d1y81a1          61 VFVVPP----------KVG---------LQVAKEAVEAGFKKLWF   86 (116)
T ss_dssp             EECSCH----------HHH---------HHHHHHHHHTTCCEEEE
T ss_pred             EEEeCH----------HHH---------HHHHHHHHhcCCceEEe
Confidence            755321          111         37888888889876554

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=94.01  E-value=0.12  Score=38.73  Aligned_cols=79  Identities=18%  Similarity=0.110  Sum_probs=48.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhh----------hCCCcceEEEeeCCCcccHHHHHH
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD----------ALPHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~----------~~~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      .|||++.| ++..+..+.+.|++.|   ++|.++...+++......          ....++.+...+..+.+.+.+.++
T Consensus         3 ~mKI~f~G-~~~~~~~~L~~L~~~~---~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (206)
T d1fmta2           3 SLRIIFAG-TPDFAARHLDALLSSG---HNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVA   78 (206)
T ss_dssp             CCEEEEEE-CSHHHHHHHHHHHHTT---CEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHH
T ss_pred             CcEEEEEC-CCHHHHHHHHHHHhCC---CCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHh
Confidence            57899998 6889999999999999   676655433322111000          001345555555555555666666


Q ss_pred             HhCCCCEEEECCCc
Q 020880           73 KFGQPDVVVNCAAL   86 (320)
Q Consensus        73 ~~~~~d~Vih~a~~   86 (320)
                      .. ++|+++-+.+.
T Consensus        79 ~~-~~d~~v~~~~~   91 (206)
T d1fmta2          79 EL-QADVMVVVAYG   91 (206)
T ss_dssp             HT-TCSEEEEESCC
T ss_pred             hh-cceEEEeeccc
Confidence            65 89998876553

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=93.99  E-value=0.11  Score=37.76  Aligned_cols=77  Identities=17%  Similarity=0.124  Sum_probs=47.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCccc-HHHHHHHh--CCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG-FDAVALKF--GQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~--~~~d~   79 (320)
                      +.+|+|.|+ |-+|...+..+...|.  ..|++.++++++.+...+ ++..   ...|..+.+. ..+..+..  .++|+
T Consensus        29 g~~VlI~G~-Gg~g~~~~~~~~~~g~--~~Vi~~~~~~~rl~~a~~-~GAd---~~in~~~~~~~~~~~~~~~~~~G~d~  101 (175)
T d1cdoa2          29 GSTCAVFGL-GAVGLAAVMGCHSAGA--KRIIAVDLNPDKFEKAKV-FGAT---DFVNPNDHSEPISQVLSKMTNGGVDF  101 (175)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGGGHHHHHH-TTCC---EEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCEEEEEec-CCccchHHHHHHHHhh--chheeecchHHHHHHHHH-cCCc---EEEcCCCcchhHHHHHHhhccCCcce
Confidence            468999996 5577777777777764  578888888766544333 3321   2234433322 23333221  37999


Q ss_pred             EEECCCc
Q 020880           80 VVNCAAL   86 (320)
Q Consensus        80 Vih~a~~   86 (320)
                      ||.+.|.
T Consensus       102 vid~~G~  108 (175)
T d1cdoa2         102 SLECVGN  108 (175)
T ss_dssp             EEECSCC
T ss_pred             eeeecCC
Confidence            9999874

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.99  E-value=0.16  Score=36.09  Aligned_cols=40  Identities=13%  Similarity=0.105  Sum_probs=30.7

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhh
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA   49 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~   49 (320)
                      ||-+.| .|.+|+.+++.|++.|   +.+ ...|+.++...+.+.
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g---~~~-~~~~~~~~~~~~~~~   41 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRF---PTL-VWNRTFEKALRHQEE   41 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTS---CEE-EECSSTHHHHHHHHH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCC---CEE-EEeCCHHHHHHHHHH
Confidence            688999 7999999999999988   555 467776665554443

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.95  E-value=0.11  Score=34.95  Aligned_cols=75  Identities=15%  Similarity=0.135  Sum_probs=51.4

Q ss_pred             CcEEEEEcCCC----------hhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHH
Q 020880            3 KKRVLVVGGTG----------YLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         3 ~~~ilItGatG----------~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      .+||||.|+..          |.+.+.++.|.+.|   ++++.+..+++...--.+    -..-+..+-...+.+.++++
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g---~~~IliN~NPeTVstd~d----~aD~lYfeplt~e~v~~Ii~   76 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDG---YETIMVNCNPETVSTDYD----TSDRLYFEPVTLEDVLEIVR   76 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTT---CEEEEECCCTTSSTTSTT----SSSEEECCCCSHHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcC---CeEEEEecChhhhhcChh----hcCceEEccCCHHHHHHHHH
Confidence            68999999743          78999999999999   888888777665432111    11114444455666777776


Q ss_pred             HhCCCCEEEECCC
Q 020880           73 KFGQPDVVVNCAA   85 (320)
Q Consensus        73 ~~~~~d~Vih~a~   85 (320)
                      . +++|.|+-..|
T Consensus        77 ~-E~p~~ii~~~G   88 (121)
T d1a9xa4          77 I-EKPKGVIVQYG   88 (121)
T ss_dssp             H-HCCSEEECSSS
T ss_pred             H-hCCCEEEeehh
Confidence            5 38999875433

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.93  E-value=0.034  Score=37.88  Aligned_cols=35  Identities=17%  Similarity=0.274  Sum_probs=31.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL   42 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~   42 (320)
                      ++++|.| +|+||-.++..|.+.|   .+|+.+.|.+.-
T Consensus        23 ~~i~IiG-~G~ig~E~A~~l~~~G---~~Vtiv~~~~~l   57 (119)
T d3lada2          23 GKLGVIG-AGVIGLELGSVWARLG---AEVTVLEAMDKF   57 (119)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSSS
T ss_pred             CeEEEEC-CChHHHHHHHHHHHcC---CceEEEEeeccc
Confidence            6899999 6999999999999999   889988887543

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.83  E-value=0.039  Score=37.74  Aligned_cols=34  Identities=26%  Similarity=0.566  Sum_probs=30.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP   41 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~   41 (320)
                      ++++|.| .|++|-.++..|.+.|   .+|+.+.|.+.
T Consensus        33 ~~vvIiG-gG~iG~E~A~~l~~~g---~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIG-GGFIGLELAGNLAEAG---YHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEE-CSHHHHHHHHHHHHTT---CEEEEECSSSC
T ss_pred             CcEEEEC-CcHHHHHHHHHhhccc---ceEEEEecccc
Confidence            6899999 6999999999999999   88988888743

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.69  E-value=0.047  Score=38.24  Aligned_cols=34  Identities=24%  Similarity=0.303  Sum_probs=29.2

Q ss_pred             CcEEEEEcCC---ChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            3 KKRVLVVGGT---GYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         3 ~~~ilItGat---G~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      .++|.|.||+   +-.|..+++.|++.|   |+|+.+..+
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g---~~v~pVnP~   55 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHG---YDVYPVNPK   55 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTT---CEEEEECTT
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCC---CEEEEECCc
Confidence            4689999998   889999999999999   888766544

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.69  E-value=0.043  Score=38.14  Aligned_cols=36  Identities=19%  Similarity=0.429  Sum_probs=31.8

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL   42 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~   42 (320)
                      .++|+|.| +|++|-.++..|.+.|   .+|..+.+.+..
T Consensus        35 ~k~v~VIG-gG~iG~E~A~~l~~~g---~~Vtvie~~~~~   70 (133)
T d1q1ra2          35 DNRLVVIG-GGYIGLEVAATAIKAN---MHVTLLDTAARV   70 (133)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSSST
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhhC---cceeeeeecccc
Confidence            57899999 6999999999999999   889988887543

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.66  E-value=0.13  Score=37.44  Aligned_cols=43  Identities=23%  Similarity=0.207  Sum_probs=38.1

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP   51 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~   51 (320)
                      +|+|.| .|-.|.+-++..+..|   ..|.+++.+.+..+++....+
T Consensus        31 ~VvViG-aGvaG~~Aa~~A~~lG---A~V~v~D~~~~~~~~l~~l~~   73 (183)
T d1l7da1          31 RVLVFG-VGVAGLQAIATAKRLG---AVVMATDVRAATKEQVESLGG   73 (183)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCSTTHHHHHHTTC
T ss_pred             EEEEEc-CcHHHHHHHHHHHHcC---CEEEEEeccHHHHHHHHHhhc
Confidence            899999 6999999999999999   899999999988887776544

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.58  E-value=0.045  Score=36.92  Aligned_cols=36  Identities=22%  Similarity=0.424  Sum_probs=31.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL   42 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~   42 (320)
                      .++++|.| .|++|-.++..|.+.|   .+|+.+.|.+.-
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g---~~Vtlve~~~~i   56 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLG---AQVSVVEARERI   56 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHT---CEEEEECSSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcc---cceEEEeeeccc
Confidence            36899999 6999999999999999   889988887543

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.56  E-value=0.049  Score=39.58  Aligned_cols=37  Identities=22%  Similarity=0.288  Sum_probs=31.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      ++|||+|.| .|++|-.++..|.+.+.+ .+|+.+.+.+
T Consensus         1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~-~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVG-GGTGGATAAKYIKLADPS-IEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHCTT-SEEEEECSCS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHcCCC-CcEEEEECCC
Confidence            368999999 699999999999998866 6788877664

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.52  E-value=0.13  Score=36.92  Aligned_cols=56  Identities=14%  Similarity=0.189  Sum_probs=41.6

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+|+|.|-+..+|+-|+..|.++|   .+|+......                        ..+.+...   +.|+||
T Consensus        36 ~GK~v~VIGrS~~VG~Pla~lL~~~g---atVt~~h~~t------------------------~~l~~~~~---~ADivI   85 (166)
T d1b0aa1          36 FGLNAVVIGASNIVGRPMSMELLLAG---CTTTVTHRFT------------------------KNLRHHVE---NADLLI   85 (166)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTT---CEEEEECSSC------------------------SCHHHHHH---HCSEEE
T ss_pred             ccceEEEEeccccccHHHHHHHHHhh---cccccccccc------------------------chhHHHHh---hhhHhh
Confidence            47899999999999999999999999   6776443321                        11334444   679999


Q ss_pred             ECCCcc
Q 020880           82 NCAALS   87 (320)
Q Consensus        82 h~a~~~   87 (320)
                      .++|..
T Consensus        86 ~a~G~p   91 (166)
T d1b0aa1          86 VAVGKP   91 (166)
T ss_dssp             ECSCCT
T ss_pred             hhccCc
Confidence            988854

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.48  E-value=0.024  Score=42.41  Aligned_cols=38  Identities=21%  Similarity=0.326  Sum_probs=30.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhh
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL   46 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~   46 (320)
                      |||.|.| .||+|..++..| ++|   ++|++.+-++.....+
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g---~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQ---NEVTIVDILPSKVDKI   38 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTT---SEEEEECSCHHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCC---CcEEEEECCHHHHHHH
Confidence            6799998 899999998755 678   8999998886655443

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.18  E-value=0.056  Score=37.09  Aligned_cols=36  Identities=17%  Similarity=0.291  Sum_probs=31.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL   42 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~   42 (320)
                      .++++|.| .|+||-.++..|...|   .+|+.+.+.+.-
T Consensus        26 p~~vvIiG-gG~IG~E~A~~~~~~G---~~Vtive~~~~i   61 (125)
T d1ojta2          26 PGKLLIIG-GGIIGLEMGTVYSTLG---SRLDVVEMMDGL   61 (125)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHHT---CEEEEECSSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHhhcCC---CEEEEEEeeccc
Confidence            36899999 6999999999999999   899999887543

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=93.14  E-value=0.41  Score=34.37  Aligned_cols=31  Identities=23%  Similarity=0.398  Sum_probs=25.9

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      ||.|-| -|=||+.+.+.+++++   .+|++..-.
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~---~~ivaINd~   32 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMG---AQVVAVNDP   32 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHT---CCEEEEECT
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCC---CcEEEECCC
Confidence            688888 8999999999999988   677766543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.12  E-value=0.043  Score=37.54  Aligned_cols=36  Identities=22%  Similarity=0.489  Sum_probs=32.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCCh
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP   43 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~   43 (320)
                      ++++|.| .|+||-.++..|.+.|   .+|+.+.|++...
T Consensus        26 ~~~viiG-~G~iglE~A~~~~~~G---~~Vtvi~~~~~~l   61 (123)
T d1dxla2          26 KKLVVIG-AGYIGLEMGSVWGRIG---SEVTVVEFASEIV   61 (123)
T ss_dssp             SEEEESC-CSHHHHHHHHHHHHHT---CEEEEECSSSSSS
T ss_pred             CeEEEEc-cchHHHHHHHHHHhcC---CeEEEEEEccccC
Confidence            6899999 6999999999999999   8999999986543

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.00  E-value=0.051  Score=40.07  Aligned_cols=71  Identities=10%  Similarity=0.103  Sum_probs=45.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEe-cCCCCChhhhhhhCC--CcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDALP--HSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~-~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      ++||.|.| +|.+|+..++.|.....  ++|+++ ++++++...+.+.+.  ....+       .++++++++. .++|+
T Consensus         1 kiki~iIG-~G~~g~~~~~~l~~~~~--~~i~ai~d~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ll~~-~~iD~   69 (184)
T d1ydwa1           1 QIRIGVMG-CADIARKVSRAIHLAPN--ATISGVASRSLEKAKAFATANNYPESTKI-------HGSYESLLED-PEIDA   69 (184)
T ss_dssp             CEEEEEES-CCTTHHHHHHHHHHCTT--EEEEEEECSSHHHHHHHHHHTTCCTTCEE-------ESSHHHHHHC-TTCCE
T ss_pred             CeEEEEEc-CCHHHHHHHHHHHhCCC--CEEEEEEeCCccccccchhccccccceee-------cCcHHHhhhc-cccce
Confidence            36899999 68999999998876532  788765 455444444444332  11221       2346677764 37999


Q ss_pred             EEECC
Q 020880           80 VVNCA   84 (320)
Q Consensus        80 Vih~a   84 (320)
                      |+-+.
T Consensus        70 v~I~t   74 (184)
T d1ydwa1          70 LYVPL   74 (184)
T ss_dssp             EEECC
T ss_pred             eeecc
Confidence            99653

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.00  E-value=0.044  Score=37.47  Aligned_cols=32  Identities=31%  Similarity=0.381  Sum_probs=28.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      ++++|.| .|+||-.++..|.+.|   .+|+.+.|+
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG---~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIG---LDVTVMVRS   52 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTT---CCEEEEESS
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcC---CeEEEEEec
Confidence            5799999 6999999999999999   778877775

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.88  E-value=0.059  Score=41.67  Aligned_cols=34  Identities=29%  Similarity=0.413  Sum_probs=30.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      .+||+|.| .|..|...+..|.++|   ++|.++.|..
T Consensus         6 ~~kVvVIG-aGiaGl~~A~~L~~~G---~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLG-SGVIGLSSALILARKG---YSVHILARDL   39 (268)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSC
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHCC---CCEEEEeCCC
Confidence            46899999 6999999999999999   7888888763

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.73  E-value=0.08  Score=35.87  Aligned_cols=35  Identities=14%  Similarity=0.058  Sum_probs=30.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP   41 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~   41 (320)
                      .++|+|.| +|+||-.++..|...|   .+|....|.+.
T Consensus        22 ~~~vvVvG-gG~ig~E~A~~l~~~g---~~vt~i~~~~~   56 (121)
T d1mo9a2          22 GSTVVVVG-GSKTAVEYGCFFNATG---RRTVMLVRTEP   56 (121)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSCT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcc---hhheEeeccch
Confidence            47899999 7999999999999999   88888888754

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=92.59  E-value=0.84  Score=32.57  Aligned_cols=98  Identities=17%  Similarity=0.128  Sum_probs=56.2

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChh---hhhh------hCCCcc------------eEEEeeCCC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ---LLLD------ALPHSF------------VFFDVDLKS   63 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~---~~~~------~~~~~~------------~~~~~Dl~d   63 (320)
                      ||.|=| -|=||+.+.+.++++..  ++|++..-.....+   .+++      .++..+            ......-.|
T Consensus         2 kigING-fGRIGR~v~R~~~~~~~--~~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~   78 (166)
T d2b4ro1           2 KLGING-FGRIGRLVFRAAFGRKD--IEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKD   78 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSS--EEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSS
T ss_pred             eEEEEC-CCHHHHHHHHHHhhCCC--cEEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCC
Confidence            678888 89999999999998743  77776654322222   2221      011111            111122345


Q ss_pred             cccHHHHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEee
Q 020880           64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS  127 (320)
Q Consensus        64 ~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~S  127 (320)
                      ++.+... + . ++|+|+-|.|.+..                   ...++...+.|++|+|...
T Consensus        79 p~~i~W~-~-~-gvdiViEcTG~f~~-------------------~~~~~~hl~~gakkViiSA  120 (166)
T d2b4ro1          79 PSQIPWG-K-C-QVDVVCESTGVFLT-------------------KELASSHLKGGAKKVIMSA  120 (166)
T ss_dssp             GGGCCHH-H-H-TCSEEEECSSSCCS-------------------HHHHTHHHHTTCSEEEESS
T ss_pred             hHHcccc-c-c-CCCEEEEecccccc-------------------hhhhhhhhccCCCEEEEec
Confidence            6554322 2 1 89999999987532                   1333334457887877743

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.55  E-value=0.052  Score=38.81  Aligned_cols=68  Identities=18%  Similarity=0.259  Sum_probs=47.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVV   81 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vi   81 (320)
                      .+|+++|.| -|++|+-+++.|...|   ..|+....++  ...+...+ +.++.        ..++++++   ..|+||
T Consensus        22 aGk~vvV~G-YG~vGrG~A~~~rg~G---a~V~V~E~DP--i~alqA~m-dGf~v--------~~~~~a~~---~aDi~v   83 (163)
T d1v8ba1          22 SGKIVVICG-YGDVGKGCASSMKGLG---ARVYITEIDP--ICAIQAVM-EGFNV--------VTLDEIVD---KGDFFI   83 (163)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHHT---CEEEEECSCH--HHHHHHHT-TTCEE--------CCHHHHTT---TCSEEE
T ss_pred             cCCEEEEec-ccccchhHHHHHHhCC---CEEEEEecCc--hhhHHHHh-cCCcc--------CchhHccc---cCcEEE
Confidence            478999999 9999999999999999   8888877764  33333333 22221        12344554   678888


Q ss_pred             ECCCcc
Q 020880           82 NCAALS   87 (320)
Q Consensus        82 h~a~~~   87 (320)
                      -+.|..
T Consensus        84 TaTGn~   89 (163)
T d1v8ba1          84 TCTGNV   89 (163)
T ss_dssp             ECCSSS
T ss_pred             EcCCCC
Confidence            776643

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=92.37  E-value=0.068  Score=36.69  Aligned_cols=97  Identities=11%  Similarity=0.063  Sum_probs=58.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +.+|+|.| +|-+|+.|++.+.....  |++++...+......  ... .++..+     .++.+.+...  ..++.++-
T Consensus         3 ~~~v~I~G-aG~~G~~l~~~l~~~~~--~~iv~fiDdd~~k~G--~~I-~Gi~V~-----~~~~l~~~~~--~~i~iai~   69 (126)
T d2dt5a2           3 KWGLCIVG-MGRLGSALADYPGFGES--FELRGFFDVDPEKVG--RPV-RGGVIE-----HVDLLPQRVP--GRIEIALL   69 (126)
T ss_dssp             CEEEEEEC-CSHHHHHHHHCSCCCSS--EEEEEEEESCTTTTT--CEE-TTEEEE-----EGGGHHHHST--TTCCEEEE
T ss_pred             CceEEEEc-CCHHHHHHHHhHhhcCC--cEEEEEEeCchHhcC--CEE-CCEEEe-----cHHHHHHHHh--hcccEEEE
Confidence            34899999 69999999998754322  898887776443211  111 233332     2344555554  25666554


Q ss_pred             CCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeechhh
Q 020880           83 CAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV  131 (320)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~~v  131 (320)
                      +...          .. .        ..+++.|.+.|++.+.-++....
T Consensus        70 ~i~~----------~~-~--------~~I~d~l~~~gIk~I~~f~~~~l   99 (126)
T d2dt5a2          70 TVPR----------EA-A--------QKAADLLVAAGIKGILNFAPVVL   99 (126)
T ss_dssp             CSCH----------HH-H--------HHHHHHHHHHTCCEEEECSSSCC
T ss_pred             eCCH----------HH-H--------HHHHHHHHHcCCCEEeecCceee
Confidence            4321          10 0        36778888889987777665544

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.35  E-value=0.019  Score=50.05  Aligned_cols=33  Identities=12%  Similarity=0.065  Sum_probs=25.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH   38 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r   38 (320)
                      ..+|+|.|+ |-+|+.+++.|...|-  -.++.++.
T Consensus        25 ~s~VlvvG~-gglG~Ei~knLvl~GV--g~itivD~   57 (529)
T d1yova1          25 SAHVCLINA-TATGTEILKNLVLPGI--GSFTIIDG   57 (529)
T ss_dssp             HCEEEECCC-SHHHHHHHHHHHTTTC--SEEEEECC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHhcC--CEEEEEcC
Confidence            468999996 6699999999999983  34555544

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.15  E-value=0.29  Score=35.19  Aligned_cols=34  Identities=21%  Similarity=0.249  Sum_probs=29.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH   38 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r   38 (320)
                      .+|+|.|.|-+..+|+.|+..|+++|   .+|+....
T Consensus        38 ~Gk~vvVIGrS~iVGrPLa~lL~~~g---atVt~~~~   71 (170)
T d1a4ia1          38 AGRHAVVVGRSKIVGAPMHDLLLWNN---ATVTTCHS   71 (170)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTT---CEEEEECT
T ss_pred             ccceEEEEecCCccchHHHHHHHhcc---CceEEEec
Confidence            47899999999999999999999999   67764433

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=92.06  E-value=0.62  Score=35.64  Aligned_cols=33  Identities=30%  Similarity=0.291  Sum_probs=25.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH   38 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r   38 (320)
                      ..+|+|.| .|-+|++++..|...|-  -++++.+.
T Consensus        30 ~~~VliiG-~GglGs~va~~La~~Gv--g~i~lvD~   62 (247)
T d1jw9b_          30 DSRVLIVG-LGGLGCAASQYLASAGV--GNLTLLDF   62 (247)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTC--SEEEEECC
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEECC
Confidence            46899999 67799999999999993  34555443

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.04  E-value=1.1  Score=32.71  Aligned_cols=36  Identities=31%  Similarity=0.351  Sum_probs=27.3

Q ss_pred             CCCcEEEEEcCCChhhHHHHHHHhhccC---CCceEEEecCC
Q 020880            1 MSKKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHS   39 (320)
Q Consensus         1 m~~~~ilItGatG~IG~~l~~~L~~~g~---~v~~v~~~~r~   39 (320)
                      |+ +||.|=| -|=||+.+.+.+++++.   . .+|++....
T Consensus         1 M~-ikigING-FGRIGR~vlR~~~~~~~~~~~-i~iv~Ind~   39 (190)
T d1k3ta1           1 MP-IKVGING-FGRIGRMVFQALCEDGLLGTE-IDVVAVVDM   39 (190)
T ss_dssp             CC-EEEEEEC-CSHHHHHHHHHHHHTTCBTTT-EEEEEEEES
T ss_pred             CC-eEEEEEC-CChHHHHHHHHHHHcCCCCCC-eEEEEEecC
Confidence            54 6899999 89999999999987642   2 566665443

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.99  E-value=0.069  Score=42.29  Aligned_cols=32  Identities=25%  Similarity=0.305  Sum_probs=28.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH   38 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r   38 (320)
                      .++|+|-| .|-+|+++++.|.+.|   ..|+++.-
T Consensus        36 gktvaIqG-fGnVG~~~A~~L~e~G---akvv~vsD   67 (293)
T d1hwxa1          36 DKTFAVQG-FGNVGLHSMRYLHRFG---AKCVAVGE   67 (293)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEEc
Confidence            57999999 7999999999999999   78877654

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=91.96  E-value=0.43  Score=31.77  Aligned_cols=61  Identities=8%  Similarity=-0.058  Sum_probs=43.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   79 (320)
                      ..||+|-|-||..|+.-+++.++.|   .+|++-+.........     ..+.       =.++++++.+.. ++|+
T Consensus         6 ~trVlvQGiTG~~G~~ht~~m~~yG---T~vVaGVtPgkgG~~~-----~giP-------Vf~sV~eAv~~~-~~~~   66 (119)
T d2nu7a1           6 NTKVICQGFTGSQGTFHSEQAIAYG---TKMVGGVTPGKGGTTH-----LGLP-------VFNTVREAVAAT-GATA   66 (119)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECTTCTTEEE-----TTEE-------EESSHHHHHHHH-CCCE
T ss_pred             CCcEEEEcCCCcHHHHHHHHHHHhC---CceEEEEccCCCCccc-----CCCc-------hhhHHHHHHHHh-CCCe
Confidence            3589999999999999999999999   8888877764332211     1122       123567777765 6776

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.79  E-value=0.093  Score=38.96  Aligned_cols=35  Identities=14%  Similarity=0.246  Sum_probs=29.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      |||+|.| .|++|-.++..|.+.+.. .+|+...|.+
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~-~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPD-AEIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTT-SEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCC-CeEEEEeCCC
Confidence            6899999 699999999999887654 6788777754

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.73  E-value=0.092  Score=42.33  Aligned_cols=35  Identities=26%  Similarity=0.436  Sum_probs=31.1

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP   41 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~   41 (320)
                      +|||+|.| +|+-|...|..|.++|   ++|.++.+++.
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~G---~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEKG---HQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEEESSSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhCC---CCEEEEECCCC
Confidence            68999999 7999999999999999   88888887754

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=91.54  E-value=1.2  Score=31.73  Aligned_cols=33  Identities=15%  Similarity=0.292  Sum_probs=26.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      +||.|-| -|=||+.+.+.++++..  ++|++..-.
T Consensus         2 ikigING-FGRIGR~v~R~~~~~~~--i~ivaINd~   34 (166)
T d1gado1           2 IKVGING-FGRIGRIVFRAAQKRSD--IEIVAINDL   34 (166)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCSS--EEEEEEECS
T ss_pred             eEEEEEC-CcHHHHHHHHHHhhCCC--eEEEEEeCC
Confidence            4788998 89999999999998854  777766543

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=91.41  E-value=0.12  Score=41.80  Aligned_cols=37  Identities=14%  Similarity=0.172  Sum_probs=31.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP   41 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~   41 (320)
                      ||||+|.| +|.-|-..+..|+++|.. ++|+++-|++.
T Consensus         4 ~KrVaIIG-aG~sGl~~A~~L~~~~~~-~~v~vfEk~~~   40 (335)
T d2gv8a1           4 IRKIAIIG-AGPSGLVTAKALLAEKAF-DQVTLFERRGS   40 (335)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCC-SEEEEECSSSS
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHhCCC-CCEEEEECCCC
Confidence            78999999 699999999999887743 58888888854

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.39  E-value=0.1  Score=36.88  Aligned_cols=33  Identities=27%  Similarity=0.442  Sum_probs=28.0

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH   38 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r   38 (320)
                      .+|+|||.|| |.+|..-++.|++.|   .+|+.+..
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~G---A~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTG---CKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGT---CEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeC
Confidence            4789999995 999999999999999   66666643

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.03  E-value=0.24  Score=36.96  Aligned_cols=30  Identities=20%  Similarity=0.360  Sum_probs=25.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEec
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH   37 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~   37 (320)
                      |||++.| ++..|..+.+.|+++|   ++|.++.
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~---~~i~~V~   30 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEG---HEVVGVF   30 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTT---CEEEEEE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCC---CcEEEEE
Confidence            6799998 6788999999999999   6666554

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.97  E-value=0.26  Score=35.56  Aligned_cols=79  Identities=16%  Similarity=0.127  Sum_probs=46.7

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeC--CCcccHHHHHHHhCCCCE
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL--KSGSGFDAVALKFGQPDV   79 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~~~~~~~~~~~~d~   79 (320)
                      .+|+++|.|-+.-+|+-|+..|+++|   ..|.....+ .........--.-......|+  ...+.+++...   ..|+
T Consensus        28 ~GK~vvVIGrS~iVG~Pla~lL~~~g---aTVt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~---~aDI  100 (171)
T d1edza1          28 YGKKCIVINRSEIVGRPLAALLANDG---ATVYSVDVN-NIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSL---DSDV  100 (171)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTS---CEEEEECSS-EEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHH---HCSE
T ss_pred             CCCEEEEECCccccHHHHHHHHHHCC---CEEEEeccc-cccccccccceeeeeeccccccccchhHHhhccc---cCCE
Confidence            36899999999999999999999999   677644332 111000000000001122232  22344566555   6899


Q ss_pred             EEECCCcc
Q 020880           80 VVNCAALS   87 (320)
Q Consensus        80 Vih~a~~~   87 (320)
                      ||..+|..
T Consensus       101 vIsavG~p  108 (171)
T d1edza1         101 VITGVPSE  108 (171)
T ss_dssp             EEECCCCT
T ss_pred             EEEccCCC
Confidence            99888754

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.96  E-value=0.21  Score=38.42  Aligned_cols=34  Identities=24%  Similarity=0.264  Sum_probs=29.5

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      ..++|+|-| .|-+|+++++.|.+.|   .+|++..-.
T Consensus        30 ~g~~v~IqG-fGnVG~~~a~~L~~~G---akvv~vsD~   63 (242)
T d1v9la1          30 EGKTVAIQG-MGNVGRWTAYWLEKMG---AKVIAVSDI   63 (242)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEEECS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcC---CeEEEeecc
Confidence            468999999 8999999999999999   788776643

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=90.94  E-value=0.095  Score=37.14  Aligned_cols=76  Identities=20%  Similarity=0.129  Sum_probs=41.6

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCC----------cceEEEeeCCCcccHHHHHHHhC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH----------SFVFFDVDLKSGSGFDAVALKFG   75 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~----------~~~~~~~Dl~d~~~~~~~~~~~~   75 (320)
                      |-+.| +|-+|+++++.|.+.+   ..+....|++++.+.+.+....          ...++..=+. ++.+.+++..+.
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~---~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~-d~~i~~v~~~l~   76 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRY---EIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVP-DRYIKTVANHLN   76 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC-------CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSC-TTTHHHHHTTTC
T ss_pred             EEEEe-CcHHHHHHHHHHHhCC---CEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEecc-chhhhHHHhhhc
Confidence            34566 8999999999886644   2334578888777777665431          1111222222 234566665442


Q ss_pred             -CCCEEEECCCc
Q 020880           76 -QPDVVVNCAAL   86 (320)
Q Consensus        76 -~~d~Vih~a~~   86 (320)
                       .-.+|+|+++.
T Consensus        77 ~~~~ivi~~s~~   88 (153)
T d2i76a2          77 LGDAVLVHCSGF   88 (153)
T ss_dssp             CSSCCEEECCSS
T ss_pred             ccceeeeecccc
Confidence             23456777654

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=90.62  E-value=1.7  Score=31.06  Aligned_cols=34  Identities=24%  Similarity=0.439  Sum_probs=25.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH   38 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r   38 (320)
                      |||.|-| -|=||+.+.+.++++...-.+|++..-
T Consensus         1 ikIgING-fGRIGR~v~R~~~~~~~~~i~ivaINd   34 (172)
T d1rm4a1           1 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVIND   34 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEEcC
Confidence            5799999 899999999998875432156665443

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=90.60  E-value=0.47  Score=34.05  Aligned_cols=32  Identities=22%  Similarity=0.306  Sum_probs=26.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      |||.|=| -|=||+.+.+.|.+++   ++|++..-.
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~---i~iv~INd~   32 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRG---VEVALINDL   32 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHT---CCEEEEECS
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCC---CEEEEECCC
Confidence            5789998 8999999999999988   777765543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=90.42  E-value=0.11  Score=40.59  Aligned_cols=31  Identities=23%  Similarity=0.337  Sum_probs=28.4

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      |+|.| .|.+|..++.+|.++|   .+|+++.+..
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G---~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKEN---KNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTT---CCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCC---CcEEEEeCCC
Confidence            99999 6999999999999999   8899888864

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.32  E-value=0.22  Score=35.28  Aligned_cols=38  Identities=18%  Similarity=0.240  Sum_probs=30.1

Q ss_pred             CcEEEEE-cCCChhhHHHHHHHhhccCCCceEEEecCCCCCh
Q 020880            3 KKRVLVV-GGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLP   43 (320)
Q Consensus         3 ~~~ilIt-GatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~   43 (320)
                      .+.++|. .+.||||..+++.|.+.|   .+|+.+.+.+...
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G---~~Vtlv~~~~~~~   77 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAG---HEVTIVSGVHLAN   77 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTT---CEEEEEESSCTTT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcC---CeEEEEecCCccc
Confidence            3466665 246999999999999999   8899988875443

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.87  E-value=0.49  Score=39.61  Aligned_cols=34  Identities=29%  Similarity=0.365  Sum_probs=25.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      ..||||.|+ |-+|+.+++.|...|.  -++.+++.+
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gv--g~i~lvD~D   70 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGF--RQIHVIDMD   70 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTC--CCEEEECCC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCC--CeEEEEECC
Confidence            358999996 5599999999999994  245555543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.73  E-value=0.14  Score=37.68  Aligned_cols=36  Identities=14%  Similarity=0.265  Sum_probs=30.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCc-eEEEecCCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPL   42 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~-~v~~~~r~~~~   42 (320)
                      .+||+|.| .|..|-..+..|.++|   + +|+.+.|++..
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G---~~~V~v~E~~~~~   40 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLG---YSDITIFEKQEYV   40 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTT---CCCEEEEESSSSC
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCC---CCeEEEEEecCcc
Confidence            57999999 6999999999999999   5 47777776543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=89.34  E-value=0.21  Score=38.53  Aligned_cols=35  Identities=26%  Similarity=0.261  Sum_probs=31.3

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP   41 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~   41 (320)
                      -+||+|.| .|..|..++..|.++|   ++|+.+.|+++
T Consensus         4 ~~kV~IiG-aG~aGl~~A~~L~~~G---~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVG-GSISGLTAALMLRDAG---VDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSSS
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHCC---CCEEEEeCCCC
Confidence            47899999 6999999999999999   89999988754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=89.25  E-value=0.24  Score=36.09  Aligned_cols=36  Identities=22%  Similarity=0.245  Sum_probs=31.9

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL   42 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~   42 (320)
                      .|+|+|.| +|..|-..+..|..+|   ++|+...+.+..
T Consensus        43 ~k~V~IIG-aGPAGL~AA~~la~~G---~~Vtl~E~~~~~   78 (179)
T d1ps9a3          43 KKNLAVVG-AGPAGLAFAINAAARG---HQVTLFDAHSEI   78 (179)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEEESSSSS
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHhhc---cceEEEeccCcc
Confidence            58999999 6999999999999999   889988887543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=88.97  E-value=0.21  Score=39.35  Aligned_cols=34  Identities=26%  Similarity=0.266  Sum_probs=30.4

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      .|||+|.| +|.-|-..+.+|.++|   ++|.++.+++
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G---~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHG---LNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTS---CEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCC---CCEEEEeCCC
Confidence            48899999 6999999999999999   8899888764

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=88.96  E-value=1.4  Score=31.50  Aligned_cols=32  Identities=22%  Similarity=0.265  Sum_probs=26.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH   38 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r   38 (320)
                      -||.|-| -|=||+.+.+.++++..  +++++..-
T Consensus         2 ikIgING-FGRIGR~v~R~~~~~~~--~~ivaINd   33 (169)
T d1u8fo1           2 VKVGVNG-FGRIGRLVTRAAFNSGK--VDIVAIND   33 (169)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCS--SEEEEEEC
T ss_pred             cEEEEEC-CcHHHHHHHHHHHHCCC--cEEEEecC
Confidence            4799999 89999999999998764  77776654

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=88.93  E-value=0.54  Score=33.52  Aligned_cols=68  Identities=16%  Similarity=0.164  Sum_probs=40.9

Q ss_pred             cEEEEEcCCChhhHH-HHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEEEE
Q 020880            4 KRVLVVGGTGYLGQH-LLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVN   82 (320)
Q Consensus         4 ~~ilItGatG~IG~~-l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~Vih   82 (320)
                      +||.|.| +|.+|+. .+..|...+.  +++.+..++++....+.+.++.. . +   .+|   ++++++  .++|+|+-
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~--~~~~~~d~~~~~~~~~~~~~~~~-~-~---~~~---~~~ll~--~~iD~V~I   68 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPD--IELVLCTRNPKVLGTLATRYRVS-A-T---CTD---YRDVLQ--YGVDAVMI   68 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTT--EEEEEECSCHHHHHHHHHHTTCC-C-C---CSS---TTGGGG--GCCSEEEE
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCC--cEEEEEECCHHHHHHHHHhcccc-c-c---ccc---HHHhcc--cccceecc
Confidence            5899999 6888876 4555555433  77777777766666665554311 0 1   123   223444  27999886


Q ss_pred             CC
Q 020880           83 CA   84 (320)
Q Consensus        83 ~a   84 (320)
                      +.
T Consensus        69 ~t   70 (167)
T d1xeaa1          69 HA   70 (167)
T ss_dssp             CS
T ss_pred             cc
Confidence            53

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.85  E-value=0.13  Score=39.38  Aligned_cols=33  Identities=30%  Similarity=0.329  Sum_probs=26.8

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhh-ccCCCceEEEecC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSE-IEGKPYDVAATHH   38 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~-~g~~v~~v~~~~r   38 (320)
                      ..++|.|-| .|-+|+++++.|.+ .|   ..|++..-
T Consensus        30 ~g~~vaIqG-~GnVG~~~a~~L~~e~G---a~vv~vsd   63 (234)
T d1b26a1          30 KKATVAVQG-FGNVGQFAALLISQELG---SKVVAVSD   63 (234)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHHHC---CEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHhcC---CceEEeec
Confidence            367999998 89999999999964 58   67776653

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.78  E-value=0.22  Score=39.66  Aligned_cols=35  Identities=17%  Similarity=0.306  Sum_probs=30.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP   41 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~   41 (320)
                      |..|+|.| +|+-|..+|.+|.+.|   ++|.++.+++.
T Consensus         1 M~dv~IIG-aG~sGl~~A~~L~~~g---~~V~iiEk~~~   35 (298)
T d1i8ta1           1 MYDYIIVG-SGLFGAVCANELKKLN---KKVLVIEKRNH   35 (298)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHGGGT---CCEEEECSSSS
T ss_pred             CccEEEEC-CcHHHHHHHHHHHhCC---CcEEEEECCCC
Confidence            56899999 6999999999999999   78888887754

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.77  E-value=0.57  Score=33.62  Aligned_cols=79  Identities=8%  Similarity=-0.041  Sum_probs=40.3

Q ss_pred             CcEEEEEcCC-ChhhHHHHHHHhhc-cCCCceEEEecCCCCCh--hhhhh---hC--CCcceEEEeeCCCcccHHHHHHH
Q 020880            3 KKRVLVVGGT-GYLGQHLLQGLSEI-EGKPYDVAATHHSTPLP--QLLLD---AL--PHSFVFFDVDLKSGSGFDAVALK   73 (320)
Q Consensus         3 ~~~ilItGat-G~IG~~l~~~L~~~-g~~v~~v~~~~r~~~~~--~~~~~---~~--~~~~~~~~~Dl~d~~~~~~~~~~   73 (320)
                      +|||.|.||. .+.+..++..++.. ...+-++...+.++++.  +.+..   ..  ..+.......-+|   ..+.++ 
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td---~~~al~-   76 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLD---RRRALD-   76 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESC---HHHHHT-
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCC---chhhcC-
Confidence            4789999963 33444444444332 11114788888876542  11111   00  0111112222333   334455 


Q ss_pred             hCCCCEEEECCCcc
Q 020880           74 FGQPDVVVNCAALS   87 (320)
Q Consensus        74 ~~~~d~Vih~a~~~   87 (320)
                        ++|+||..|+..
T Consensus        77 --gaDvVv~ta~~~   88 (169)
T d1s6ya1          77 --GADFVTTQFRVG   88 (169)
T ss_dssp             --TCSEEEECCCTT
T ss_pred             --CCCEEEEccccC
Confidence              899999999865

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=88.76  E-value=0.17  Score=39.69  Aligned_cols=34  Identities=26%  Similarity=0.249  Sum_probs=29.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP   41 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~   41 (320)
                      |+|+|.| +|.-|-..+.+|.++|   ++|+++-+++.
T Consensus         1 m~V~IIG-aG~aGL~aA~~L~~~G---~~V~vlE~~~~   34 (347)
T d2ivda1           1 MNVAVVG-GGISGLAVAHHLRSRG---TDAVLLESSAR   34 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHTTT---CCEEEECSSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCC---CCEEEEecCCC
Confidence            5799999 5999999999999999   88888887643

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.74  E-value=0.24  Score=37.52  Aligned_cols=26  Identities=27%  Similarity=0.350  Sum_probs=23.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKP   30 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v   30 (320)
                      |||+|.| .|.+|...+.+|+++|++|
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence            6799999 6999999999999999653

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=88.41  E-value=2.7  Score=29.82  Aligned_cols=33  Identities=24%  Similarity=0.366  Sum_probs=24.6

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH   38 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r   38 (320)
                      ||.|-| -|=||+.+.+.++++...-.+|++..-
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd   34 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAIND   34 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEecc
Confidence            688888 899999999999976421167766543

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.33  E-value=0.49  Score=37.33  Aligned_cols=27  Identities=15%  Similarity=0.170  Sum_probs=23.1

Q ss_pred             CCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880           11 GTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus        11 atG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      .||-.|.+|++.|+.+|   ++|+.+.+..
T Consensus        44 SSGk~G~alA~~~~~~G---a~V~li~g~~   70 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAG---YGVLFLYRAR   70 (290)
T ss_dssp             CCCHHHHHHHHHHHHTT---CEEEEEEETT
T ss_pred             CchHHHHHHHHHHHHcC---CEEEEEecCC
Confidence            47999999999999999   7888776653

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=88.21  E-value=0.69  Score=32.81  Aligned_cols=67  Identities=18%  Similarity=0.225  Sum_probs=41.3

Q ss_pred             CcEEEEEcCCChhhHH-HHHHHhhccCCCceEEEec-CCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQH-LLQGLSEIEGKPYDVAATH-HSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~-l~~~L~~~g~~v~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      ++||.|.| +|.+|+. .+..|.....  +++++++ ++++....+.+.++  +     +..+  .+.++.+   ++|+|
T Consensus         1 Kiri~iIG-~G~~g~~~~~~~l~~~~~--~~i~~v~d~~~~~~~~~~~~~~--~-----~~~~--~~~~l~~---~~D~V   65 (164)
T d1tlta1           1 KLRIGVVG-LGGIAQKAWLPVLAAASD--WTLQGAWSPTRAKALPICESWR--I-----PYAD--SLSSLAA---SCDAV   65 (164)
T ss_dssp             CEEEEEEC-CSTHHHHTHHHHHHSCSS--EEEEEEECSSCTTHHHHHHHHT--C-----CBCS--SHHHHHT---TCSEE
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHhCCC--cEEEEEEechhHhhhhhhhccc--c-----cccc--cchhhhh---hcccc
Confidence            46899999 6999975 4565655432  7877655 55666665555432  1     2222  3455554   89998


Q ss_pred             EECC
Q 020880           81 VNCA   84 (320)
Q Consensus        81 ih~a   84 (320)
                      +-+.
T Consensus        66 ~I~t   69 (164)
T d1tlta1          66 FVHS   69 (164)
T ss_dssp             EECS
T ss_pred             cccc
Confidence            8664

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=87.88  E-value=0.28  Score=35.55  Aligned_cols=34  Identities=18%  Similarity=0.223  Sum_probs=26.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH   38 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r   38 (320)
                      +.+|+|.| +|++|-.++..|.+.|.+ .+++...+
T Consensus         3 ~a~VvIIG-gG~~G~e~A~~l~~~g~~-v~i~~~~~   36 (183)
T d1d7ya1           3 KAPVVVLG-AGLASVSFVAELRQAGYQ-GLITVVGD   36 (183)
T ss_dssp             CSSEEEEC-CSHHHHHHHHHHHHHTCC-SCEEEEES
T ss_pred             CCCEEEEC-ccHHHHHHHHHHHhcCCc-eEEEEEec
Confidence            45799999 799999999999999965 34544433

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.67  E-value=0.18  Score=38.64  Aligned_cols=34  Identities=29%  Similarity=0.336  Sum_probs=27.2

Q ss_pred             CCcEEEEEcCCChhhHHHHHHHhh-ccCCCceEEEecCC
Q 020880            2 SKKRVLVVGGTGYLGQHLLQGLSE-IEGKPYDVAATHHS   39 (320)
Q Consensus         2 ~~~~ilItGatG~IG~~l~~~L~~-~g~~v~~v~~~~r~   39 (320)
                      ..++|+|-| .|-+|+++++.|.+ .|   ..|++..-+
T Consensus        31 ~g~~v~IqG-fGnVG~~~a~~L~~~~G---~kvv~vsD~   65 (239)
T d1gtma1          31 KGKTIAIQG-YGNAGYYLAKIMSEDFG---MKVVAVSDS   65 (239)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTC---CEEEEEECS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHhcC---cceeecccc
Confidence            368999999 69999999999975 47   677766544

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=87.63  E-value=0.19  Score=36.34  Aligned_cols=76  Identities=16%  Similarity=0.203  Sum_probs=43.8

Q ss_pred             CcEEEEEcCCChhhHHH--HHHHhh-ccCCCceEEEecCCCCChhhhhh-------hCCCcceEEEeeCCCcccHHHHHH
Q 020880            3 KKRVLVVGGTGYLGQHL--LQGLSE-IEGKPYDVAATHHSTPLPQLLLD-------ALPHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l--~~~L~~-~g~~v~~v~~~~r~~~~~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      .|||.|.|| |-+|+.+  +..|+. ......++.+.+.++++.+....       ..+...+     +....+..++++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~-----i~~~td~~eaL~   75 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLK-----FEKTMNLDDVII   75 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCE-----EEEESCHHHHHT
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeE-----EEEeCChhhccc
Confidence            478999995 8888653  333432 22111589999998765443221       1222222     111223455665


Q ss_pred             HhCCCCEEEECCCcc
Q 020880           73 KFGQPDVVVNCAALS   87 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~   87 (320)
                         ++|+|+..++..
T Consensus        76 ---dad~Vv~~~~~g   87 (171)
T d1obba1          76 ---DADFVINTAMVG   87 (171)
T ss_dssp             ---TCSEEEECCCTT
T ss_pred             ---CCCeEeeecccc
Confidence               999999998764

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.57  E-value=0.092  Score=37.78  Aligned_cols=75  Identities=17%  Similarity=0.204  Sum_probs=41.4

Q ss_pred             cEEEEEcCCChhhHHHHHH-Hhhcc--CCCceEEEecCCCCChhhhhhhC----CCcceEEEeeCCCcccHHHHHHHhCC
Q 020880            4 KRVLVVGGTGYLGQHLLQG-LSEIE--GKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDLKSGSGFDAVALKFGQ   76 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~-L~~~g--~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~   76 (320)
                      |||.|.|| |-+|...+-. |+..-  ..+.++.+.+.++++.....+..    ..... +..  +.  ...+.++   +
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~-~~~--t~--~~~~~l~---~   71 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFK-VLI--SD--TFEGAVV---D   71 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSE-EEE--CS--SHHHHHT---T
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCce-EEE--ec--CcccccC---C
Confidence            57999997 5467666533 33221  11257888988866554322210    12222 222  21  1234444   8


Q ss_pred             CCEEEECCCcc
Q 020880           77 PDVVVNCAALS   87 (320)
Q Consensus        77 ~d~Vih~a~~~   87 (320)
                      +|+||..|+..
T Consensus        72 aDvVVita~~~   82 (162)
T d1up7a1          72 AKYVIFQFRPG   82 (162)
T ss_dssp             CSEEEECCCTT
T ss_pred             CCEEEEecccC
Confidence            99999999864

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.41  E-value=0.35  Score=36.70  Aligned_cols=36  Identities=33%  Similarity=0.442  Sum_probs=31.6

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL   42 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~   42 (320)
                      .++|+|.| +|+.|-..+..|.++|   ++|+...+++..
T Consensus        49 ~k~VvIIG-aGpAGl~aA~~l~~~G---~~v~l~E~~~~~   84 (233)
T d1djqa3          49 KDSVLIVG-AGPSGSEAARVLMESG---YTVHLTDTAEKI   84 (233)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSSST
T ss_pred             CceEEEEc-ccHHHHHHHHHHHHhc---cceeeEeecccc
Confidence            57999999 6999999999999999   888888877543

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=87.14  E-value=2.4  Score=30.23  Aligned_cols=32  Identities=19%  Similarity=0.333  Sum_probs=25.8

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      ||.|-| -|=||+.+.+.++++..  ++|.+..-.
T Consensus         3 kIgING-fGRIGR~v~R~~l~~~~--~~ivaINd~   34 (171)
T d3cmco1           3 KVGING-FGRIGRNVFRAALKNPD--IEVVAVNDL   34 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHTTCTT--EEEEEEECS
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCC--cEEEEEcCC
Confidence            688888 89999999999998753  777766543

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.04  E-value=0.25  Score=35.71  Aligned_cols=34  Identities=24%  Similarity=0.343  Sum_probs=26.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH   38 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r   38 (320)
                      .++|+|.| +|++|-.++..|.+.|.+ .+|+...+
T Consensus         3 ~~~VvIIG-gG~~G~e~A~~l~~~g~~-v~v~~~~~   36 (185)
T d1q1ra1           3 NDNVVIVG-TGLAGVEVAFGLRASGWE-GNIRLVGD   36 (185)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCC-SEEEEECS
T ss_pred             CCCEEEEC-CcHHHHHHHHHHHHcCCc-eEEEEecC
Confidence            57899999 699999999999999955 34444443

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.15  E-value=0.31  Score=38.24  Aligned_cols=33  Identities=27%  Similarity=0.269  Sum_probs=29.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      .+|+|.| .|..|..++..|.+.|   ++|.++.|++
T Consensus         3 ~~V~IvG-aGp~Gl~~A~~L~~~G---~~v~vlE~~~   35 (292)
T d1k0ia1           3 TQVAIIG-AGPSGLLLGQLLHKAG---IDNVILERQT   35 (292)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHHT---CCEEEECSSC
T ss_pred             CCEEEEC-cCHHHHHHHHHHHHCC---CCEEEEeCCC
Confidence            4799999 5899999999999999   8899888875

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.37  E-value=0.76  Score=34.62  Aligned_cols=79  Identities=18%  Similarity=0.212  Sum_probs=49.7

Q ss_pred             CcEEEEEcC-CChhhHHHHHHHhhccCC-CceEEEecCCCCChhhhhhhC---------CCcceEEEeeCCCcccHHHHH
Q 020880            3 KKRVLVVGG-TGYLGQHLLQGLSEIEGK-PYDVAATHHSTPLPQLLLDAL---------PHSFVFFDVDLKSGSGFDAVA   71 (320)
Q Consensus         3 ~~~ilItGa-tG~IG~~l~~~L~~~g~~-v~~v~~~~r~~~~~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~   71 (320)
                      ..+||..|+ |||....|++.+...|.. ..+|+.+.+.++-.+...+..         -.++.++.+|..+..     .
T Consensus        81 g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-----~  155 (223)
T d1r18a_          81 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-----P  155 (223)
T ss_dssp             TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----G
T ss_pred             CCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----c
Confidence            468999984 888888888877766621 047888888765433222111         146777888876532     1


Q ss_pred             HHhCCCCEEEECCCcc
Q 020880           72 LKFGQPDVVVNCAALS   87 (320)
Q Consensus        72 ~~~~~~d~Vih~a~~~   87 (320)
                      .. ..+|.|+-.++..
T Consensus       156 ~~-~~fD~Iiv~~a~~  170 (223)
T d1r18a_         156 PN-APYNAIHVGAAAP  170 (223)
T ss_dssp             GG-CSEEEEEECSCBS
T ss_pred             cc-cceeeEEEEeech
Confidence            11 3689888777653

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=85.34  E-value=0.39  Score=38.18  Aligned_cols=34  Identities=26%  Similarity=0.302  Sum_probs=30.5

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      .|+|+|.| +|..|-..+..|.++|   ++|.++.+++
T Consensus        30 pkkV~IIG-aG~aGLsaA~~L~~~G---~~V~vlE~~~   63 (370)
T d2iida1          30 PKHVVIVG-AGMAGLSAAYVLAGAG---HQVTVLEASE   63 (370)
T ss_dssp             CCEEEEEC-CBHHHHHHHHHHHHHT---CEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCC---CCEEEEeCCC
Confidence            47999999 6999999999999999   8899888764

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=85.02  E-value=2.3  Score=30.42  Aligned_cols=34  Identities=24%  Similarity=0.369  Sum_probs=25.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCC-CceEEEecC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGK-PYDVAATHH   38 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~-v~~v~~~~r   38 (320)
                      +||.|=| -|=||+.+.+.+++++.. -++|++..-
T Consensus         2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd   36 (173)
T d1obfo1           2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAIND   36 (173)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEEC
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcC
Confidence            5799998 899999999999875421 166665554

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.98  E-value=0.49  Score=35.10  Aligned_cols=82  Identities=9%  Similarity=0.056  Sum_probs=50.8

Q ss_pred             cEEEEEcCCChhhHHHH-HH---HhhccC--CCceEEEecCCCCChhhhhhh-----------------CCCcceEEEee
Q 020880            4 KRVLVVGGTGYLGQHLL-QG---LSEIEG--KPYDVAATHHSTPLPQLLLDA-----------------LPHSFVFFDVD   60 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~-~~---L~~~g~--~v~~v~~~~r~~~~~~~~~~~-----------------~~~~~~~~~~D   60 (320)
                      ..++|.||||=+...-+ ..   |...|.  +-+.|++..|++-..+.+.+.                 +-..+.++.+|
T Consensus        21 ~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~d  100 (203)
T d1qkia1          21 HIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQ  100 (203)
T ss_dssp             EEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBCC
T ss_pred             cEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccCc
Confidence            46899999998886532 22   222331  118899999986543332221                 12467788999


Q ss_pred             CCCcccHHHHHHHh---C---CCCEEEECCC
Q 020880           61 LKSGSGFDAVALKF---G---QPDVVVNCAA   85 (320)
Q Consensus        61 l~d~~~~~~~~~~~---~---~~d~Vih~a~   85 (320)
                      ++|++++..+.+.+   +   ....|+.+|-
T Consensus       101 ~~~~~~~~~L~~~l~~~~~~~~~~rifYLAv  131 (203)
T d1qkia1         101 YDDAASYQRLNSHMNALHLGSQANRLFYLAL  131 (203)
T ss_dssp             TTCHHHHHHHHHHHHHTTTTTTSEEEEEECS
T ss_pred             CCChhhHHHHHHHHHHHhcCCCcceEEEEec
Confidence            99999877654322   1   3356787764

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.90  E-value=0.59  Score=32.14  Aligned_cols=35  Identities=23%  Similarity=0.424  Sum_probs=27.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHh----hccCCCceEEEecCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLS----EIEGKPYDVAATHHSTP   41 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~----~~g~~v~~v~~~~r~~~   41 (320)
                      .++++|.| .||+|-.++..|.    +.|   .+|+.+.+.+.
T Consensus        37 ~k~i~IvG-gG~~G~E~A~~l~~~~~~~g---~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIG-GGFLGSELACALGRKARALG---TEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHHHHHT---CEEEEECSSSS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHHHHhcC---CEEEEeccccc
Confidence            36899999 5999999998885    357   78888877654

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.88  E-value=0.4  Score=36.25  Aligned_cols=32  Identities=28%  Similarity=0.160  Sum_probs=28.9

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTP   41 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~   41 (320)
                      |+|.| +|.-|...|..|.++|   ++|.++.+++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G---~~V~vlE~~~~   39 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDG---KKVLHIDKQDH   39 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTT---CCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCC---CCEEEEcCCCC
Confidence            79999 7999999999999999   88999888753

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=84.36  E-value=0.97  Score=35.95  Aligned_cols=33  Identities=27%  Similarity=0.406  Sum_probs=21.7

Q ss_pred             cEEEEEcC-CC-hh--hHHHHHHHhhccCCCceEEEecCC
Q 020880            4 KRVLVVGG-TG-YL--GQHLLQGLSEIEGKPYDVAATHHS   39 (320)
Q Consensus         4 ~~ilItGa-tG-~I--G~~l~~~L~~~g~~v~~v~~~~r~   39 (320)
                      |||+|++| || .+  +.+|+++|.++|   ++|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G---~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQG---WQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTT---CEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCC---CEEEEEEeC
Confidence            57888764 32 22  224889999999   677665544

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.14  E-value=0.58  Score=31.13  Aligned_cols=39  Identities=23%  Similarity=0.364  Sum_probs=27.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL   42 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~   42 (320)
                      .++++|.|| |++|-.++..|.+.|..-.+|+.+.|.+..
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~i   58 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEMI   58 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccchh
Confidence            368999995 999999997665443111678888886543

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=84.07  E-value=0.65  Score=30.82  Aligned_cols=35  Identities=23%  Similarity=0.293  Sum_probs=27.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHhh---ccCCCceEEEecCCCCC
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSE---IEGKPYDVAATHHSTPL   42 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~---~g~~v~~v~~~~r~~~~   42 (320)
                      ++++|.| .|++|-.++..|.+   .|   .+|....|.+..
T Consensus        19 ~~v~IiG-gG~ig~E~A~~l~~~~~~g---~~Vtli~~~~~i   56 (117)
T d1feca2          19 KRALCVG-GGYISIEFAGIFNAYKARG---GQVDLAYRGDMI   56 (117)
T ss_dssp             SEEEEEC-SSHHHHHHHHHHHHHSCTT---CEEEEEESSSSS
T ss_pred             CeEEEEC-CChHHHHHHHHhHhhcccc---cccceecccccc
Confidence            6899999 69999999976654   36   788888887543

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=83.44  E-value=1.6  Score=31.96  Aligned_cols=81  Identities=15%  Similarity=0.190  Sum_probs=49.0

Q ss_pred             EEEEEcCCChhhHHHH-HH---HhhccC--CCceEEEecCCCCChhhhhhh-----------------CCCcceEEEeeC
Q 020880            5 RVLVVGGTGYLGQHLL-QG---LSEIEG--KPYDVAATHHSTPLPQLLLDA-----------------LPHSFVFFDVDL   61 (320)
Q Consensus         5 ~ilItGatG~IG~~l~-~~---L~~~g~--~v~~v~~~~r~~~~~~~~~~~-----------------~~~~~~~~~~Dl   61 (320)
                      .++|+||||=+...-+ ..   |-..|.  +-+.|++..|++-..+.+.+.                 +-..+.++.+|+
T Consensus         7 ~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~~~~~~~~~~~~~~~~~~y~~~~~   86 (195)
T d1h9aa1           7 LVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAEAFIEHFSYRAHDV   86 (195)
T ss_dssp             EEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCSCHHHHHHHHTTEEEEECCT
T ss_pred             EEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHhhccchHhhHHHHhhccceeeEee
Confidence            3457899998887533 12   222231  118899999986554433211                 114678899999


Q ss_pred             CCcccHHHHHHHh--------CCCCEEEECCC
Q 020880           62 KSGSGFDAVALKF--------GQPDVVVNCAA   85 (320)
Q Consensus        62 ~d~~~~~~~~~~~--------~~~d~Vih~a~   85 (320)
                      .+++++..+.+.+        .....||.+|-
T Consensus        87 ~~~~~~~~l~~~l~~~~~~~~~~~~rifYLAv  118 (195)
T d1h9aa1          87 TDAASYAVLKEAIEEAADKFDIDGNRIFYMSV  118 (195)
T ss_dssp             TCTTTHHHHHHHHHHHHHHHTCCSCEEEEECS
T ss_pred             ccHhhHHHHHHHHHHHHhhcCCCcceEEEEec
Confidence            9998765544322        12346888873

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=82.77  E-value=0.69  Score=32.64  Aligned_cols=31  Identities=32%  Similarity=0.553  Sum_probs=25.5

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      ||+|.| .|++|-.++..|.+ +   .+|+.+.|.+
T Consensus         2 rVvIIG-gG~~G~e~A~~l~~-~---~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLSQ-T---YEVTVIDKEP   32 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTT-T---SEEEEECSSS
T ss_pred             eEEEEC-CcHHHHHHHHHHHc-C---CCEEEEeccc
Confidence            799999 69999999999864 5   6788777653

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=82.28  E-value=3  Score=30.22  Aligned_cols=105  Identities=9%  Similarity=0.121  Sum_probs=54.7

Q ss_pred             CCcEEEEEcCCCh-------------hhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHH
Q 020880            2 SKKRVLVVGGTGY-------------LGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFD   68 (320)
Q Consensus         2 ~~~~ilItGatG~-------------IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   68 (320)
                      .+++|+++|=|=.             -|..|.+.|-..+   ++|+-...+-.....+..               ...+.
T Consensus         2 ~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~---~~v~N~gi~G~t~~~~~~---------------~~~~~   63 (208)
T d2o14a2           2 TNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHT---FQVRNMASGGQIARGFRN---------------DGQLE   63 (208)
T ss_dssp             CCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTT---CEEEECCCTTCCHHHHHH---------------SSHHH
T ss_pred             CCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCc---eEEEeCeechhhhccHhh---------------hhhHH
Confidence            4688999986622             1345555554445   666655544322222111               11233


Q ss_pred             HHHHHhCCCCEEEECCCccCccccccCchhhhhccccccHHHHHhhhhhccCceEEEeech
Q 020880           69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD  129 (320)
Q Consensus        69 ~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~~~v~~Ss~  129 (320)
                      .........|+|+-+.|..........+...+..|+    ..+++.+++.++ ++|.++..
T Consensus        64 ~~~~~~~~~D~vvi~~G~ND~~~~~~~~~~~~~~~l----~~li~~~~~~~~-~~vl~~~~  119 (208)
T d2o14a2          64 AILKYIKPGDYFMLQLGINDTNPKHKESEAEFKEVM----RDMIRQVKAKGA-DVILSTPQ  119 (208)
T ss_dssp             HHHTTCCTTCEEEEECCTGGGCGGGCCCHHHHHHHH----HHHHHHHHTTTC-EEEEECCC
T ss_pred             HHHHhcCCCCEEEEEcCCCcccccccccHHHHHHHH----HHHHHHHHhcCC-ceeecccc
Confidence            444433356988877765432111122334455554    477778877777 55666543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=81.99  E-value=2.5  Score=29.98  Aligned_cols=76  Identities=9%  Similarity=0.051  Sum_probs=42.2

Q ss_pred             CcEEEEEcCCChhhHH-HHHHHhhccCC--CceEEEecCCCCChhhhhhhC-------CCcceEEEeeCCCcccHHHHHH
Q 020880            3 KKRVLVVGGTGYLGQH-LLQGLSEIEGK--PYDVAATHHSTPLPQLLLDAL-------PHSFVFFDVDLKSGSGFDAVAL   72 (320)
Q Consensus         3 ~~~ilItGatG~IG~~-l~~~L~~~g~~--v~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~   72 (320)
                      ..||.|.||.+ +|.. ++..|+..-.+  +-++++.+.++++++.....+       .........  +   +..+.++
T Consensus         3 ~~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---d~~eal~   76 (167)
T d1u8xx1           3 SFSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--T---DPEEAFT   76 (167)
T ss_dssp             CEEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--S---CHHHHHS
T ss_pred             CceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--C---ChhhccC
Confidence            35899999844 5554 44455433111  147888888876654222211       122221111  1   2344565


Q ss_pred             HhCCCCEEEECCCcc
Q 020880           73 KFGQPDVVVNCAALS   87 (320)
Q Consensus        73 ~~~~~d~Vih~a~~~   87 (320)
                         +.|+||..|+..
T Consensus        77 ---~AD~Vvitag~~   88 (167)
T d1u8xx1          77 ---DVDFVMAHIRVG   88 (167)
T ss_dssp             ---SCSEEEECCCTT
T ss_pred             ---CCCEEEECCCcC
Confidence               899999999864

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.94  E-value=1.4  Score=32.79  Aligned_cols=74  Identities=22%  Similarity=0.213  Sum_probs=45.1

Q ss_pred             CcEEEEEc-CCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC----CCcceEEEeeCCCcccHHHHHHHhCCC
Q 020880            3 KKRVLVVG-GTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL----PHSFVFFDVDLKSGSGFDAVALKFGQP   77 (320)
Q Consensus         3 ~~~ilItG-atG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~~   77 (320)
                      +++||-.| |||+....+++.+-..|    .|++...+++........+    -.++.++.+|..+.-     ... +.+
T Consensus        76 g~~VLdiG~GtG~~s~~la~~~~~~g----~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~-----~~~-~~f  145 (213)
T d1dl5a1          76 GMRVLEIGGGTGYNAAVMSRVVGEKG----LVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV-----PEF-SPY  145 (213)
T ss_dssp             TCEEEEECCTTSHHHHHHHHHHCTTC----EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-----GGG-CCE
T ss_pred             cceEEEecCccchhHHHHHHHhCCCC----cEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc-----ccc-cch
Confidence            46888766 56777777777665554    7888888765443322221    246667777765422     111 368


Q ss_pred             CEEEECCCc
Q 020880           78 DVVVNCAAL   86 (320)
Q Consensus        78 d~Vih~a~~   86 (320)
                      |.|+..++.
T Consensus       146 D~I~~~~~~  154 (213)
T d1dl5a1         146 DVIFVTVGV  154 (213)
T ss_dssp             EEEEECSBB
T ss_pred             hhhhhhccH
Confidence            999887764

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=81.54  E-value=1.2  Score=27.97  Aligned_cols=30  Identities=20%  Similarity=0.258  Sum_probs=24.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHhhccCCCceEEEec
Q 020880            4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH   37 (320)
Q Consensus         4 ~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~   37 (320)
                      |||||.| +|-=-.+|+..|.+..   .+++..-
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~---~~v~~~p   30 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQG---YEVHFYP   30 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCC---CeEEEec
Confidence            6899999 6777889999998877   6676553

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=81.52  E-value=0.71  Score=35.76  Aligned_cols=31  Identities=23%  Similarity=0.234  Sum_probs=28.0

Q ss_pred             EEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880            6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus         6 ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      |+|.| .|..|..++.+|.++|   ++|+++.+..
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G---~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQG---VKTLLVDAFD   36 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTT---CCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCC---CcEEEEeCCC
Confidence            78999 6999999999999999   8899888864

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=81.39  E-value=0.68  Score=31.83  Aligned_cols=32  Identities=22%  Similarity=0.264  Sum_probs=26.6

Q ss_pred             CcEEEEEcCC---ChhhHHHHHHHhhccCCCceEEEec
Q 020880            3 KKRVLVVGGT---GYLGQHLLQGLSEIEGKPYDVAATH   37 (320)
Q Consensus         3 ~~~ilItGat---G~IG~~l~~~L~~~g~~v~~v~~~~   37 (320)
                      -|+|.|.|||   +-.|..+.+.|++.|   |.+....
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g---~~~~~v~   47 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQG---YRVLPVN   47 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTT---CEEEEEC
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCC---CCceEEE
Confidence            3689999998   679999999999999   7776543

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.77  E-value=0.53  Score=35.55  Aligned_cols=75  Identities=13%  Similarity=0.065  Sum_probs=46.7

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhC---------------------CCcceEEEeeC
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL---------------------PHSFVFFDVDL   61 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~---------------------~~~~~~~~~Dl   61 (320)
                      +.+||..|+ |- | ..+..|.++|   ++|++++-++...+...+..                     ..++.++.+|+
T Consensus        46 ~~rvLd~GC-G~-G-~~a~~LA~~G---~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~  119 (229)
T d2bzga1          46 GLRVFFPLC-GK-A-VEMKWFADRG---HSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSI  119 (229)
T ss_dssp             SCEEEETTC-TT-C-THHHHHHHTT---CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCG
T ss_pred             CCEEEEeCC-CC-c-HHHHHHHhCC---CcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcch
Confidence            468999994 43 3 4466677789   89999999876554433221                     23566777776


Q ss_pred             CCcccHHHHHHHhCCCCEEEECCCccC
Q 020880           62 KSGSGFDAVALKFGQPDVVVNCAALSV   88 (320)
Q Consensus        62 ~d~~~~~~~~~~~~~~d~Vih~a~~~~   88 (320)
                      .+....   ..  +.+|+|+-.+....
T Consensus       120 ~~l~~~---~~--~~fd~i~~~~~l~~  141 (229)
T d2bzga1         120 FDLPRT---NI--GKFDMIWDRGALVA  141 (229)
T ss_dssp             GGGGGS---CC--CCEEEEEESSSTTT
T ss_pred             hhcccc---cc--CceeEEEEEEEEEe
Confidence            553210   11  25788887766543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=80.76  E-value=0.68  Score=36.41  Aligned_cols=33  Identities=18%  Similarity=0.430  Sum_probs=28.0

Q ss_pred             EEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCC
Q 020880            5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST   40 (320)
Q Consensus         5 ~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~   40 (320)
                      +|+|.| .|.+|..++.+|.++|.  .+|+++.|+.
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~--~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGW--NNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTC--CCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCC--CcEEEEeCCC
Confidence            699999 69999999999999993  2588888764

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.17  E-value=4.9  Score=26.89  Aligned_cols=62  Identities=11%  Similarity=-0.010  Sum_probs=43.2

Q ss_pred             CcEEEEEcCCChhhHHHHHHHhhccCCCceEEEecCCCCChhhhhhhCCCcceEEEeeCCCcccHHHHHHHhCCCCEE
Q 020880            3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVV   80 (320)
Q Consensus         3 ~~~ilItGatG~IG~~l~~~L~~~g~~v~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~V   80 (320)
                      ..||+|-|-||..|+.-+++.++.|   .+|++-+.........     .++.       =.+++.++.+.. ++|+=
T Consensus        15 ~TrVivQGiTG~~G~~ht~~m~~YG---T~iVaGVtPgKgG~~~-----~giP-------Vf~tV~eA~~~~-~~daS   76 (130)
T d1euca1          15 NTKVICQGFTGKQGTFHSQQALEYG---TNLVGGTTPGKGGKTH-----LGLP-------VFNTVKEAKEQT-GATAS   76 (130)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECTTCTTCEE-----TTEE-------EESSHHHHHHHH-CCCEE
T ss_pred             CCeEEEEcCCCcHHHHHHHHHHHhc---CCeEEeeccCCCCccc-----cCcc-------chhhHHHHHHhc-CCcEE
Confidence            3589999999999999999999999   8888877764332211     1122       123466777665 67763