Citrus Sinensis ID: 020889


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
MGFDLESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRARHQQKYRNISDVLWEAISTRQVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTRANLIVAAAAGACTVIVTQPLDTASSRMQTSEFGKSKGLWKSLSESTWSEAFDGLGISLLLTSNPSIQYTVFDQLKQRLLRRRLKRETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAIRCKVMLQAAESDEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKTSWVLLLALQKILSTTHGRLKSA
ccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccccHHHHHHHHHHHHHcHHHHHHHHHccccccccHHHHHHHHHHHHHHHcHHccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHcHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
cccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccHHEHccccHHHHcHccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccHHHHHHHHHHcccHHHHcccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccEEEccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
mgfdleslsdatsGAIGALVSTtilypldtcktKYQAEVRARHQQKYRNISDVLWEAISTRQVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLqksgnksigtRANLIVAAAAGACTVIVTqpldtassrmqtsefgkskglWKSLSESTWSEAFDGLGISLlltsnpsiqyTVFDQLKQRLLRRRLKretgkepspealpaFSAFFLGALSKCVATFLTYPAIRCKVMLQAaesdedginqapqrnkntvsDALCSIwkregplgfyKGIQAQILKTVLSSALLLMIKEKITKTSWVLLLALQKILSTthgrlksa
MGFDLESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRARHQQKYRNISDVLWEAISTRQVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTRANLIVAAAAGACTVIVTQPLDTASSRMQTSEFGKSKGLWKSLSESTWSEAFDGLGISLLLTSNPSIQYTVFDQLKQRLLRRRLKretgkepspealPAFSAFFLGALSKCVATFLTYPAIRCKVMLQAAESDedginqapqrnkntVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKTSWVLLLALQKilstthgrlksa
MGFDLESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRARHQQKYRNISDVLWEAISTRQVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTRANLIVAAAAGACTVIVTQPLDTASSRMQTSEFGKSKGLWKSLSESTWSEAFDGLGISLLLTSNPSIQYTVFDqlkqrllrrrlkrETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAIRCKVMLQAAESDEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKTSWVLLLALQKILSTTHGRLKSA
*************GAIGALVSTTILYPLDTCKTKYQAEVRARHQQKYRNISDVLWEAISTRQVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTRANLIVAAAAGACTVIVTQPL*****************LWKSLSESTWSEAFDGLGISLLLTSNPSIQYTVFDQLKQRLLR***************LPAFSAFFLGALSKCVATFLTYPAIRCKVMLQA******************VSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKTSWVLLLALQKILST********
***DLESLSDATSGAIGALVSTTILYPLDTCKTK******************VLWEAISTRQVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRL************RANLIVAAAAGACTVIVTQPLDTASSR**************SLSESTWSEAFDGLGISLLLTSNPSIQYTVFDQLKQRLL****************LPAFSAFFLGALSKCVATFLTYPAIRCKVM*******************NTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKTSWVLLLA***************
**********ATSGAIGALVSTTILYPLDTCKTKYQAEVRARHQQKYRNISDVLWEAISTRQVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTRANLIVAAAAGACTVIVTQPLDTAS***************KSLSESTWSEAFDGLGISLLLTSNPSIQYTVFDQLKQRLLRRRLK********PEALPAFSAFFLGALSKCVATFLTYPAIRCKVMLQAAESDEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKTSWVLLLALQKILST********
**FDLESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRARHQQKYRNISDVLWEAISTRQVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTRANLIVAAAAGACTVIVTQPLDTASSRMQTSEFGKSKGLWKSLSESTWSEAFDGLGISLLLTSNPSIQYTVFDQLKQRLLRRRLK*********EALPAFSAFFLGALSKCVATFLTYPAIRCKVMLQAAESDEDGIN*APQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKTSWVLLLALQKILS*********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGFDLESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRARHQQKYRNISDVLWEAISTRQVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTRANLIVAAAAGACTVIVTQPLDTASSRMQTSEFGKSKGLWKSLSESTWSEAFDGLGISLLLTSNPSIQYTVFDQLKQRLLRRRLKRETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAIRCKVMLQAAESDEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKTSWVLLLALQKILSTTHGRLKSA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query320 2.2.26 [Sep-21-2011]
Q9MA90322 Peroxisomal adenine nucle yes no 0.990 0.984 0.693 1e-128
Q8VZS0321 Peroxisomal adenine nucle no no 0.984 0.981 0.691 1e-125
B6ZJZ9318 Peroxisomal adenine nucle no no 0.990 0.996 0.702 1e-119
Q76P23329 Mitochondrial substrate c yes no 0.937 0.911 0.283 2e-32
O43808307 Peroxisomal membrane prot yes no 0.871 0.908 0.289 5e-29
Q06497328 Peroxisomal adenine nucle yes no 0.856 0.835 0.278 7e-28
O70579307 Peroxisomal membrane prot yes no 0.871 0.908 0.292 5e-26
Q75A82340 Peroxisomal adenine nucle yes no 0.840 0.791 0.267 9e-26
O04200331 Peroxisomal nicotinamide no no 0.837 0.809 0.287 1e-24
P21245423 Peroxisomal membrane prot N/A no 0.881 0.666 0.265 1e-21
>sp|Q9MA90|PNC1_ARATH Peroxisomal adenine nucleotide carrier 1 OS=Arabidopsis thaliana GN=PNC1 PE=1 SV=1 Back     alignment and function desciption
 Score =  457 bits (1175), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 224/323 (69%), Positives = 276/323 (85%), Gaps = 6/323 (1%)

Query: 1   MGFDLESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRARHQQKYRNISDVLWEAIST 60
           MG DLES+S+ATSGAIG+L+STTILYPLDTCK+K+QAEVRAR QQKYR +SDV+WEAIS 
Sbjct: 1   MGVDLESVSEATSGAIGSLLSTTILYPLDTCKSKFQAEVRARGQQKYRYLSDVMWEAISK 60

Query: 61  RQVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTRANLIVAAAAGACT 120
            QV SLYQGLGTKN QSFISQFIYFY YS+FKR++ +++G+KSIGT+ANL++AAAAGACT
Sbjct: 61  GQVFSLYQGLGTKNFQSFISQFIYFYSYSYFKRVHSERTGSKSIGTKANLLIAAAAGACT 120

Query: 121 VIVTQPLDTASSRMQTSEFGKSKGLWKSLSESTWSEAFDGLGISLLLTSNPSIQYTVFDQ 180
            ++ QPLDTASSRMQTSEFG+SKGLWK+L+E +W++AFDGLGISLLLTSNP+IQYTVFDQ
Sbjct: 121 SVLIQPLDTASSRMQTSEFGESKGLWKTLTEGSWADAFDGLGISLLLTSNPAIQYTVFDQ 180

Query: 181 LKQRLLRRR-LKRETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAIRCKVMLQAA-ES 238
           LKQ LL+++  K E G   SP  L AF AF LGA+SK VAT LTYPAIRCKVM+QAA ES
Sbjct: 181 LKQHLLKQKNAKAENGS--SPVVLSAFMAFVLGAVSKSVATVLTYPAIRCKVMIQAADES 238

Query: 239 DEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKT 298
            E+   +  +R + T+   + +IW++EG LGF+KG+QAQILKTVLSSALLLMIKEKIT T
Sbjct: 239 KENETKKPRRRTRKTIPGVVYAIWRKEGMLGFFKGLQAQILKTVLSSALLLMIKEKITAT 298

Query: 299 SWVLLLALQK--ILSTTHGRLKS 319
           +W+L+LA+++   L+ T G+L+S
Sbjct: 299 TWILILAIRRTLFLTNTKGKLRS 321




Peroxisomal adenine nucleotide transporter catalyzing the counterexchange of ATP with AMP. ATP is needed by reactions that generate acyl-CoA for peroxisomal fatty acid beta-oxidation during postgerminative growth. Required for the beta-oxidation reactions involved in auxin biosynthesis and for the conversion of seed-reserved triacylglycerols into sucrose that is necessary for growth before the onset of photosynthesis.
Arabidopsis thaliana (taxid: 3702)
>sp|Q8VZS0|PNC2_ARATH Peroxisomal adenine nucleotide carrier 2 OS=Arabidopsis thaliana GN=PNC2 PE=1 SV=1 Back     alignment and function description
>sp|B6ZJZ9|PNC1_SOYBN Peroxisomal adenine nucleotide carrier 1 OS=Glycine max GN=PNC1 PE=2 SV=1 Back     alignment and function description
>sp|Q76P23|PM34_DICDI Mitochondrial substrate carrier family protein Q OS=Dictyostelium discoideum GN=mcfQ PE=2 SV=1 Back     alignment and function description
>sp|O43808|PM34_HUMAN Peroxisomal membrane protein PMP34 OS=Homo sapiens GN=SLC25A17 PE=1 SV=1 Back     alignment and function description
>sp|Q06497|ANT1_YEAST Peroxisomal adenine nucleotide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ANT1 PE=1 SV=1 Back     alignment and function description
>sp|O70579|PM34_MOUSE Peroxisomal membrane protein PMP34 OS=Mus musculus GN=Slc25a17 PE=2 SV=1 Back     alignment and function description
>sp|Q75A82|ANT1_ASHGO Peroxisomal adenine nucleotide transporter 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ANT1 PE=3 SV=1 Back     alignment and function description
>sp|O04200|PXN_ARATH Peroxisomal nicotinamide adenine dinucleotide carrier OS=Arabidopsis thaliana GN=PXN PE=1 SV=1 Back     alignment and function description
>sp|P21245|PM47A_CANBO Peroxisomal membrane protein PMP47A OS=Candida boidinii GN=PMP47A PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query320
224108095322 predicted protein [Populus trichocarpa] 0.993 0.987 0.793 1e-143
449481059321 PREDICTED: LOW QUALITY PROTEIN: mitochon 1.0 0.996 0.778 1e-143
449444791321 PREDICTED: mitochondrial substrate carri 1.0 0.996 0.778 1e-143
225432570319 PREDICTED: mitochondrial substrate carri 0.996 1.0 0.806 1e-142
356574392320 PREDICTED: peroxisomal membrane protein 0.996 0.996 0.733 1e-139
255552307 427 peroxisomal membrane protein pmp34, puta 0.996 0.747 0.758 1e-139
388519031320 unknown [Lotus japonicus] 1.0 1.0 0.725 1e-137
147801320322 hypothetical protein VITISV_015341 [Viti 0.996 0.990 0.75 1e-129
225450977322 PREDICTED: peroxisomal membrane protein 0.996 0.990 0.746 1e-129
224131524317 predicted protein [Populus trichocarpa] 0.987 0.996 0.730 1e-128
>gi|224108095|ref|XP_002314718.1| predicted protein [Populus trichocarpa] gi|222863758|gb|EEF00889.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 253/319 (79%), Positives = 282/319 (88%), Gaps = 1/319 (0%)

Query: 1   MGFDLESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRARHQQKYRNISDVLWEAIST 60
           M FDLESLS+ATSGAIGALVSTTI YPLDTCKTKYQAEVRA HQQKYRNISDV WEAI++
Sbjct: 1   MAFDLESLSEATSGAIGALVSTTISYPLDTCKTKYQAEVRAHHQQKYRNISDVFWEAIAS 60

Query: 61  RQVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTRANLIVAAAAGACT 120
           RQVLSLYQGLGTKNLQSFISQF+YFYGYSFFKRLYL+KS NK+IGT+ANLIVAAAAGACT
Sbjct: 61  RQVLSLYQGLGTKNLQSFISQFVYFYGYSFFKRLYLEKSRNKTIGTKANLIVAAAAGACT 120

Query: 121 VIVTQPLDTASSRMQTSEFGKSKGLWKSLSESTWSEAFDGLGISLLLTSNPSIQYTVFDQ 180
           VIVTQPLDTASS+MQTSEFGKS+GLWK+LSE TWSEAFDGLGISLLLTSNPSIQYTVFDQ
Sbjct: 121 VIVTQPLDTASSKMQTSEFGKSRGLWKTLSEGTWSEAFDGLGISLLLTSNPSIQYTVFDQ 180

Query: 181 LKQRLLRRRLKRETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAIRCKVMLQAAESDE 240
           LK+RLL R+L +++  E SPEAL AFSAF LGA+SKC+AT +TYPAIRCKV LQAAESDE
Sbjct: 181 LKRRLLERQLSKKSSIESSPEALSAFSAFVLGAVSKCIATCVTYPAIRCKVTLQAAESDE 240

Query: 241 DGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKTSW 300
             I +   + K T+S AL SIWK EG  GF+KG+ AQ LKTVLSSAL LMIKEKI+KT+W
Sbjct: 241 SEIEEVQAKTK-TISGALYSIWKNEGSAGFFKGLLAQNLKTVLSSALHLMIKEKISKTTW 299

Query: 301 VLLLALQKILSTTHGRLKS 319
            L+LAL++ L  T  R+KS
Sbjct: 300 FLMLALKRYLFVTRSRIKS 318




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449481059|ref|XP_004156069.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial substrate carrier family protein Q-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449444791|ref|XP_004140157.1| PREDICTED: mitochondrial substrate carrier family protein Q-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225432570|ref|XP_002281134.1| PREDICTED: mitochondrial substrate carrier family protein Q [Vitis vinifera] gi|297737006|emb|CBI26207.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356574392|ref|XP_003555332.1| PREDICTED: peroxisomal membrane protein PMP34-like [Glycine max] Back     alignment and taxonomy information
>gi|255552307|ref|XP_002517198.1| peroxisomal membrane protein pmp34, putative [Ricinus communis] gi|223543833|gb|EEF45361.1| peroxisomal membrane protein pmp34, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|388519031|gb|AFK47577.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|147801320|emb|CAN77030.1| hypothetical protein VITISV_015341 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225450977|ref|XP_002284763.1| PREDICTED: peroxisomal membrane protein PMP34 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224131524|ref|XP_002328561.1| predicted protein [Populus trichocarpa] gi|222838276|gb|EEE76641.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query320
TAIR|locus:2096344322 PNC1 "peroxisomal adenine nucl 0.990 0.984 0.665 1.1e-110
UNIPROTKB|B6ZJZ9318 PNC1 "Peroxisomal adenine nucl 0.990 0.996 0.683 2.9e-110
TAIR|locus:2146355321 PNC2 "peroxisomal adenine nucl 0.981 0.978 0.668 2.6e-109
DICTYBASE|DDB_G0272346329 mcfQ "mitochondrial substrate 0.937 0.911 0.273 1.8e-32
ASPGD|ASPL0000056747336 antA [Emericella nidulans (tax 0.896 0.854 0.336 1.6e-31
CGD|CAL0000514345 ANT1 [Candida albicans (taxid: 0.815 0.756 0.297 1.4e-27
FB|FBgn0052250314 CG32250 [Drosophila melanogast 0.862 0.878 0.319 6.6e-26
ZFIN|ZDB-GENE-070620-4312 slc25a17 "solute carrier famil 0.912 0.935 0.273 5.9e-25
UNIPROTKB|E1BSN0335 SLC25A17 "Uncharacterized prot 0.862 0.823 0.288 2e-24
MGI|MGI:1342248307 Slc25a17 "solute carrier famil 0.871 0.908 0.273 3.3e-24
TAIR|locus:2096344 PNC1 "peroxisomal adenine nucleotide carrier 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1093 (389.8 bits), Expect = 1.1e-110, P = 1.1e-110
 Identities = 215/323 (66%), Positives = 266/323 (82%)

Query:     1 MGFDLESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRARHQQKYRNISDVLWEAIST 60
             MG DLES+S+ATSGAIG+L+STTILYPLDTCK+K+QAEVRAR QQKYR +SDV+WEAIS 
Sbjct:     1 MGVDLESVSEATSGAIGSLLSTTILYPLDTCKSKFQAEVRARGQQKYRYLSDVMWEAISK 60

Query:    61 RQVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTRANLIVAAAAGACT 120
              QV SLYQGLGTKN QSFISQFIYFY YS+FKR++ +++G+KSIGT+ANL++AAAAGACT
Sbjct:    61 GQVFSLYQGLGTKNFQSFISQFIYFYSYSYFKRVHSERTGSKSIGTKANLLIAAAAGACT 120

Query:   121 VIVTQPLDTASSRMQTSEFGKSKGLWKSLSESTWSEAFDGLGISLLLTSNPSIQYTVFDX 180
              ++ QPLDTASSRMQTSEFG+SKGLWK+L+E +W++AFDGLGISLLLTSNP+IQYTVFD 
Sbjct:   121 SVLIQPLDTASSRMQTSEFGESKGLWKTLTEGSWADAFDGLGISLLLTSNPAIQYTVFDQ 180

Query:   181 XXXXXXXXXXX-XETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAIRCKVMLQAAESD 239
                          E G   SP  L AF AF LGA+SK VAT LTYPAIRCKVM+QAA+  
Sbjct:   181 LKQHLLKQKNAKAENGS--SPVVLSAFMAFVLGAVSKSVATVLTYPAIRCKVMIQAADES 238

Query:   240 EDGINQAPQRN-KNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKT 298
             ++   + P+R  + T+   + +IW++EG LGF+KG+QAQILKTVLSSALLLMIKEKIT T
Sbjct:   239 KENETKKPRRRTRKTIPGVVYAIWRKEGMLGFFKGLQAQILKTVLSSALLLMIKEKITAT 298

Query:   299 SWVLLLALQK--ILSTTHGRLKS 319
             +W+L+LA+++   L+ T G+L+S
Sbjct:   299 TWILILAIRRTLFLTNTKGKLRS 321




GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0005347 "ATP transmembrane transporter activity" evidence=IGI;ISS;IDA
GO:0005777 "peroxisome" evidence=IDA
GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP
GO:0015217 "ADP transmembrane transporter activity" evidence=ISS;IDA
GO:0015866 "ADP transport" evidence=IDA
GO:0015867 "ATP transport" evidence=IDA
GO:0080024 "indolebutyric acid metabolic process" evidence=IMP
GO:0090351 "seedling development" evidence=IGI
GO:0007031 "peroxisome organization" evidence=RCA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=RCA
GO:0051788 "response to misfolded protein" evidence=RCA
GO:0080129 "proteasome core complex assembly" evidence=RCA
UNIPROTKB|B6ZJZ9 PNC1 "Peroxisomal adenine nucleotide carrier 1" [Glycine max (taxid:3847)] Back     alignment and assigned GO terms
TAIR|locus:2146355 PNC2 "peroxisomal adenine nucleotide carrier 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0272346 mcfQ "mitochondrial substrate carrier family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ASPGD|ASPL0000056747 antA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0000514 ANT1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
FB|FBgn0052250 CG32250 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070620-4 slc25a17 "solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BSN0 SLC25A17 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1342248 Slc25a17 "solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9MA90PNC1_ARATHNo assigned EC number0.69340.99060.9844yesno
B6ZJZ9PNC1_SOYBNNo assigned EC number0.70210.99060.9968nono

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query320
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-12
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-12
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-06
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-06
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 5e-05
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 63.0 bits (154), Expect = 1e-12
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 7/95 (7%)

Query: 201 EALPAFSAFFLGALSKCVATFLTYPAIRCKVMLQAAESDEDGINQAPQRNKNTVSDALCS 260
             L   ++   G ++  +A  +TYP    K  LQ++ +          R    + D    
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAA-------GGSRKYKGILDCFKK 53

Query: 261 IWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKI 295
           I+K EG  G YKG+   +L+   ++A+     E +
Sbjct: 54  IYKEEGIRGLYKGLLPNLLRVAPAAAIYFGTYETL 88


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 320
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 99.97
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 99.97
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.97
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.97
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 99.97
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.97
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 99.96
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.96
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.95
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.95
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.94
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.94
KOG0766297 consensus Predicted mitochondrial carrier protein 99.93
KOG0765333 consensus Predicted mitochondrial carrier protein 99.92
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.92
KOG0036463 consensus Predicted mitochondrial carrier protein 99.92
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.92
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.92
KOG0769308 consensus Predicted mitochondrial carrier protein 99.92
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.91
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.91
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.9
KOG1519297 consensus Predicted mitochondrial carrier protein 99.9
KOG2745321 consensus Mitochondrial carrier protein [General f 99.87
KOG2954427 consensus Mitochondrial carrier protein [General f 99.8
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.75
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.69
KOG2745321 consensus Mitochondrial carrier protein [General f 99.49
KOG1519297 consensus Predicted mitochondrial carrier protein 99.37
KOG2954427 consensus Mitochondrial carrier protein [General f 98.44
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=2.8e-57  Score=374.39  Aligned_cols=283  Identities=27%  Similarity=0.390  Sum_probs=251.7

Q ss_pred             chHHHHHHHHHHHHHHHhhhchhhhhhhHhhhcccc-ccccCCCCHHHHHHHHHHhcChhhhccccchhhhhHHHHHHHH
Q 020889            6 ESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRA-RHQQKYRNISDVLWEAISTRQVLSLYQGLGTKNLQSFISQFIY   84 (320)
Q Consensus         6 ~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~Q~~~~~-~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~~~   84 (320)
                      ..+..+++|..+|+++.++.||||++|+|.|++... ...+.|++.+++++.|++.||++|||||+.|.+++..++++++
T Consensus         4 ~~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiY   83 (299)
T KOG0764|consen    4 VQWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLY   83 (299)
T ss_pred             cchhhhhhhhhhhhhhhhhccchhHhhhhhhhccCccccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHH
Confidence            356677999999999999999999999999998433 3567899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhHhhhcCcHHHHHHhHhccCC--------CCchHHHHHHHhhchhh
Q 020889           85 FYGYSFFKRLYLQKSGNKSIGTRANLIVAAAAGACTVIVTQPLDTASSRMQTSEF--------GKSKGLWKSLSESTWSE  156 (320)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~ik~r~q~~~~--------~~~~~~~~i~~~~G~~~  156 (320)
                      |.+|+.+|.+.....++...+...++.+++.||+++.++++|+.++|+|+|.+..        +.++++++++++||++|
T Consensus        84 F~~Y~~~K~~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~~~~~Y~~~f~a~rki~k~EG~rg  163 (299)
T KOG0764|consen   84 FFFYDFLKSFITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNVQSTAYKGMFDALRKIYKEEGFRG  163 (299)
T ss_pred             HHHHHHHHHHHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccccccccccHHHHHHHHHHHHhHHH
Confidence            9999999999977666555688999999999999999999999999999998763        23478899999999999


Q ss_pred             hcccccccccccccchhhHHHHHHHHHHHHHhhccccCCCCCCCCCCChHHHHHHHHHHHHHHhhhcchhHHhHHHHhcc
Q 020889          157 AFDGLGISLLLTSNPSIQYTVFDQLKQRLLRRRLKRETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAIRCKVMLQAA  236 (320)
Q Consensus       157 ly~G~~~~~~~~~~~~~~f~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~P~d~vk~r~q~~  236 (320)
                      ||+|+.|.++.+.+.+++|..||.+|.++.+..      +.......+...++..+.++.++++.+|||++|+|+|||.+
T Consensus       164 LY~GlVP~L~GvshgAiQF~~YE~lK~~~~~~~------~~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~  237 (299)
T KOG0764|consen  164 LYKGLVPGLLGVSHGAIQFPAYEELKLRKNRKQ------GRSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQ  237 (299)
T ss_pred             HHhhhhhHhhhhchhhhhhhhHHHHHHHHHHhc------CCCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhc
Confidence            999999999999999999999999999987543      11122334566777777799999999999999999999998


Q ss_pred             cCCcccCCCCCCCCCCCHHHHHHHHHhhcCccccccchhhhhHHHHhhhhHHHHHHHHHHHHHHHHH
Q 020889          237 ESDEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKTSWVLL  303 (320)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~~~~~i~~~~ye~~~~~~~~~~  303 (320)
                      ...         +.|+++++|+++++++||++|||||+.++++|.+|.++|+|.+||.+++++..+.
T Consensus       238 ~~~---------~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv~~~L~~~~  295 (299)
T KOG0764|consen  238 SDN---------PRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENVKHFLVTHR  295 (299)
T ss_pred             ccC---------cccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHHHHHHhccc
Confidence            642         4699999999999999999999999999999999999999999999999876553



>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query320
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 6e-10
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 4e-07
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 71/312 (22%), Positives = 132/312 (42%), Gaps = 40/312 (12%) Query: 5 LESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRARH---QQKYRNISDVLWEAISTR 61 L L D +G + A +S T + P++ K Q + ++ +++Y+ I D + + Sbjct: 5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQ 64 Query: 62 QVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTR---ANLIVAAAAGA 118 LS ++G ++ F +Q + F +K+++L R NL AAGA Sbjct: 65 GFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGA 124 Query: 119 CTVIVTQPLDTASSRMQTSEFGKSK------GLWKSLSESTWSEAFDGLGISLLLTSNPS 172 ++ PLD A +R+ ++ GK GL +++ S+ GL ++ Sbjct: 125 TSLCFVYPLDFARTRL-AADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGI 183 Query: 173 IQYT-----VFDXXXXXXXXXXXXXETGKEPSPEALPAFSAFFLGALSKCVATFLTYP-- 225 I Y V+D G P P+ + ++ + VA ++YP Sbjct: 184 IIYRAAYFGVYDTA------------KGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFD 231 Query: 226 AIRCKVMLQAAESDEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSS 285 +R ++M+Q+ D + TV D I K EGP F+KG + +L+ + Sbjct: 232 TVRRRMMMQSGRKGADIMYTG------TV-DCWRKIAKDEGPKAFFKGAWSNVLRG-MGG 283 Query: 286 ALLLMIKEKITK 297 A +L++ ++I K Sbjct: 284 AFVLVLYDEIKK 295
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query320
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-34
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-18
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-12
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 8e-10
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-28
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-21
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  125 bits (316), Expect = 5e-34
 Identities = 68/310 (21%), Positives = 129/310 (41%), Gaps = 40/310 (12%)

Query: 5   LESLSDATSGAIGALVSTTILYPLDTCKTKYQ---AEVRARHQQKYRNISDVLWEAISTR 61
           L  L D  +G + A +S T + P++  K   Q   A  +   +++Y+ I D +      +
Sbjct: 5   LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQ 64

Query: 62  QVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTR---ANLIVAAAAGA 118
             LS ++G     ++ F +Q + F     +K+++L          R    NL    AAGA
Sbjct: 65  GFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGA 124

Query: 119 CTVIVTQPLDTASSRMQT-----SEFGKSKGLWKSLSESTWSEA-----FDGLGISLL-L 167
            ++    PLD A +R+       +   +  GL   ++   +        + G  +S+  +
Sbjct: 125 TSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCIT-KIFKSDGLRGLYQGFNVSVQGI 183

Query: 168 TSNPSIQYTVFDQLKQRLLRRRLKRETGKEPSPEALPAFSAFFLGALSKCVATFLTYPA- 226
               +  + V+D  K  L            P P+ +    ++ +      VA  ++YP  
Sbjct: 184 IIYRAAYFGVYDTAKGML------------PDPKNVHIIVSWMIAQTVTAVAGLVSYPFD 231

Query: 227 -IRCKVMLQAAESDEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSS 285
            +R ++M+Q+      G   A      TV D    I K EGP  F+KG  + +L+  +  
Sbjct: 232 TVRRRMMMQS------GRKGADIMYTGTV-DCWRKIAKDEGPKAFFKGAWSNVLR-GMGG 283

Query: 286 ALLLMIKEKI 295
           A +L++ ++I
Sbjct: 284 AFVLVLYDEI 293


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query320
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=3.6e-54  Score=382.08  Aligned_cols=277  Identities=21%  Similarity=0.314  Sum_probs=235.8

Q ss_pred             CcchHHHHHHHHHHHHHHHhhhchhhhhhhHhhhccccc---cccCCCCHHHHHHHHHHhcChhhhccccchhhhhHHHH
Q 020889            4 DLESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRAR---HQQKYRNISDVLWEAISTRQVLSLYQGLGTKNLQSFIS   80 (320)
Q Consensus         4 ~~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~Q~~~~~~---~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~   80 (320)
                      +.+.+..+++|++|++++.+++||+|+||+|+|++.+..   ....|++.++++++|+++||++|||||+.+++++.+++
T Consensus         4 ~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~   83 (297)
T 1okc_A            4 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   83 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHH
Confidence            456788999999999999999999999999999986422   23568999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCC---CChHHHHHHHHHHHHhHhhhcCcHHHHHHhHhccCC---------CCchHHHHH
Q 020889           81 QFIYFYGYSFFKRLYLQKSGNKS---IGTRANLIVAAAAGACTVIVTQPLDTASSRMQTSEF---------GKSKGLWKS  148 (320)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~a~~~~~~i~~P~d~ik~r~q~~~~---------~~~~~~~~i  148 (320)
                      .+++|.+||.+++.+....+..+   ......+++|++||+++.++++|+|++|+|+|++..         +..+.++++
T Consensus        84 ~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i  163 (297)
T 1okc_A           84 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKI  163 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHH
Confidence            99999999999985433222111   124577899999999999999999999999998742         123678889


Q ss_pred             HHhhchhhhcccccccccc-cccchhhHHHHHHHHHHHHHhhccccCCCCCCCCCCChHHHHHHHHHHHHHHhhhcchhH
Q 020889          149 LSESTWSEAFDGLGISLLL-TSNPSIQYTVFDQLKQRLLRRRLKRETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAI  227 (320)
Q Consensus       149 ~~~~G~~~ly~G~~~~~~~-~~~~~~~f~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~P~d  227 (320)
                      +++||+++||||+.++++| ++..+++|.+||.+|+.+.+.            ...+....+++|++||+++.++++|+|
T Consensus       164 ~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~------------~~~~~~~~~~~g~~ag~~a~~~t~P~d  231 (297)
T 1okc_A          164 FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP------------KNVHIIVSWMIAQTVTAVAGLVSYPFD  231 (297)
T ss_dssp             HHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG------------GCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC------------CCccHHHHHHHHHHHHHHHHHhcChHH
Confidence            9999999999999999999 999999999999999865322            124567889999999999999999999


Q ss_pred             HhHHHHhcccCCcccCCCCCCCCCCCHHHHHHHHHhhcCccccccchhhhhHHHHhhhhHHHHHHHHHHHH
Q 020889          228 RCKVMLQAAESDEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKT  298 (320)
Q Consensus       228 ~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~~~~~i~~~~ye~~~~~  298 (320)
                      +||+|+|.+....     .....|.++++|+++|+++||++|||||+.++++|. +.++++|.+||.+|+.
T Consensus       232 vvktr~q~~~~~~-----~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~-~~~~~~f~~ye~~k~~  296 (297)
T 1okc_A          232 TVRRRMMMQSGRK-----GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRG-MGGAFVLVLYDEIKKF  296 (297)
T ss_dssp             HHHHHHHTTTTCC-----GGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHH-HHHHHHHHHHHTC---
T ss_pred             HHHHHHhhcCCCC-----CCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhh-ccceeeehHHHHHHhh
Confidence            9999999975432     123469999999999999999999999999999996 5789999999999875



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 320
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-23
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-09
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 95.9 bits (237), Expect = 2e-23
 Identities = 62/302 (20%), Positives = 116/302 (38%), Gaps = 24/302 (7%)

Query: 5   LESLSDATSGAIGALVSTTILYPLDTCKTKYQAE---VRARHQQKYRNISDVLWEAISTR 61
           L  L D  +G + A +S T + P++  K   Q +    +   +++Y+ I D +      +
Sbjct: 4   LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQ 63

Query: 62  QVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTR---ANLIVAAAAGA 118
             LS ++G     ++ F +Q + F     +K+++L          R    NL    AAGA
Sbjct: 64  GFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGA 123

Query: 119 CTVIVTQPLDTASSRMQTS-----EFGKSKGLWKSLSESTWSEAFDGLGISLLLTSNPSI 173
            ++    PLD A +R+           +  GL   +++   S+   GL     ++    I
Sbjct: 124 TSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGII 183

Query: 174 QYTVFDQLKQRLLRRRLKRETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAIRCKVML 233
            Y           +  L                 ++ +      VA  ++YP    +  +
Sbjct: 184 IYRAAYFGVYDTAKGMLPDPKNVHI-------IVSWMIAQTVTAVAGLVSYPFDTVRRRM 236

Query: 234 QAAESDEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKE 293
                 + G   A      TV D    I K EGP  F+KG  + +L+ +   A +L++ +
Sbjct: 237 MM----QSGRKGADIMYTGTV-DCWRKIAKDEGPKAFFKGAWSNVLRGM-GGAFVLVLYD 290

Query: 294 KI 295
           +I
Sbjct: 291 EI 292


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query320
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.96
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.5e-50  Score=355.80  Aligned_cols=274  Identities=20%  Similarity=0.300  Sum_probs=239.6

Q ss_pred             CcchHHHHHHHHHHHHHHHhhhchhhhhhhHhhhccccc---cccCCCCHHHHHHHHHHhcChhhhccccchhhhhHHHH
Q 020889            4 DLESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRAR---HQQKYRNISDVLWEAISTRQVLSLYQGLGTKNLQSFIS   80 (320)
Q Consensus         4 ~~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~Q~~~~~~---~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~   80 (320)
                      +++.++++++|++|++++.+++||||+||+|+|++....   ....+++.++++++++++||+++||||+.+.+++..++
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~   82 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   82 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcc
Confidence            567889999999999999999999999999999987532   45678999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCC---ChHHHHHHHHHHHHhHhhhcCcHHHHHHhHhccCCC---------CchHHHHH
Q 020889           81 QFIYFYGYSFFKRLYLQKSGNKSI---GTRANLIVAAAAGACTVIVTQPLDTASSRMQTSEFG---------KSKGLWKS  148 (320)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~a~~~~~~i~~P~d~ik~r~q~~~~~---------~~~~~~~i  148 (320)
                      ..++|..|+.++..+.......+.   .....+.+|.+|++++.++++|+|++|+|+|.+...         ..+.++++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~  162 (292)
T d1okca_          83 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKI  162 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHh
Confidence            999999999999988765542221   235668899999999999999999999999987632         13567889


Q ss_pred             HHhhchhhhcccccccccc-cccchhhHHHHHHHHHHHHHhhccccCCCCCCCCCCChHHHHHHHHHHHHHHhhhcchhH
Q 020889          149 LSESTWSEAFDGLGISLLL-TSNPSIQYTVFDQLKQRLLRRRLKRETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAI  227 (320)
Q Consensus       149 ~~~~G~~~ly~G~~~~~~~-~~~~~~~f~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~P~d  227 (320)
                      +++||+++||+|+.+++++ +++.+++|..||.+|+.+.+.            ........++++.+++.+++++++|+|
T Consensus       163 ~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~------------~~~~~~~~~~~~~~~~~~a~~~t~P~d  230 (292)
T d1okca_         163 FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP------------KNVHIIVSWMIAQTVTAVAGLVSYPFD  230 (292)
T ss_dssp             HHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG------------GCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccchhhhhccccccccceehHhhhhhhhccchhhhcccc------------cccchHHHHHHHHHHHHHHhhccccHH
Confidence            9999999999999999998 999999999999999765433            235678889999999999999999999


Q ss_pred             HhHHHHhcccCCcccCCCCCCCCCCCHHHHHHHHHhhcCccccccchhhhhHHHHhhhhHHHHHHHHH
Q 020889          228 RCKVMLQAAESDEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKI  295 (320)
Q Consensus       228 ~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~~~~~i~~~~ye~~  295 (320)
                      |||+|+|.+....     .....|.++++|+++++++||++|||||+.++++|.++ ++++|.+||.+
T Consensus       231 vvktR~q~~~~~~-----~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         231 TVRRRMMMQSGRK-----GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HHHHHHHTTTTCC-----GGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCC-----CCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            9999999987643     23456999999999999999999999999999999766 68899999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure