Citrus Sinensis ID: 020889
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 320 | ||||||
| 224108095 | 322 | predicted protein [Populus trichocarpa] | 0.993 | 0.987 | 0.793 | 1e-143 | |
| 449481059 | 321 | PREDICTED: LOW QUALITY PROTEIN: mitochon | 1.0 | 0.996 | 0.778 | 1e-143 | |
| 449444791 | 321 | PREDICTED: mitochondrial substrate carri | 1.0 | 0.996 | 0.778 | 1e-143 | |
| 225432570 | 319 | PREDICTED: mitochondrial substrate carri | 0.996 | 1.0 | 0.806 | 1e-142 | |
| 356574392 | 320 | PREDICTED: peroxisomal membrane protein | 0.996 | 0.996 | 0.733 | 1e-139 | |
| 255552307 | 427 | peroxisomal membrane protein pmp34, puta | 0.996 | 0.747 | 0.758 | 1e-139 | |
| 388519031 | 320 | unknown [Lotus japonicus] | 1.0 | 1.0 | 0.725 | 1e-137 | |
| 147801320 | 322 | hypothetical protein VITISV_015341 [Viti | 0.996 | 0.990 | 0.75 | 1e-129 | |
| 225450977 | 322 | PREDICTED: peroxisomal membrane protein | 0.996 | 0.990 | 0.746 | 1e-129 | |
| 224131524 | 317 | predicted protein [Populus trichocarpa] | 0.987 | 0.996 | 0.730 | 1e-128 |
| >gi|224108095|ref|XP_002314718.1| predicted protein [Populus trichocarpa] gi|222863758|gb|EEF00889.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/319 (79%), Positives = 282/319 (88%), Gaps = 1/319 (0%)
Query: 1 MGFDLESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRARHQQKYRNISDVLWEAIST 60
M FDLESLS+ATSGAIGALVSTTI YPLDTCKTKYQAEVRA HQQKYRNISDV WEAI++
Sbjct: 1 MAFDLESLSEATSGAIGALVSTTISYPLDTCKTKYQAEVRAHHQQKYRNISDVFWEAIAS 60
Query: 61 RQVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTRANLIVAAAAGACT 120
RQVLSLYQGLGTKNLQSFISQF+YFYGYSFFKRLYL+KS NK+IGT+ANLIVAAAAGACT
Sbjct: 61 RQVLSLYQGLGTKNLQSFISQFVYFYGYSFFKRLYLEKSRNKTIGTKANLIVAAAAGACT 120
Query: 121 VIVTQPLDTASSRMQTSEFGKSKGLWKSLSESTWSEAFDGLGISLLLTSNPSIQYTVFDQ 180
VIVTQPLDTASS+MQTSEFGKS+GLWK+LSE TWSEAFDGLGISLLLTSNPSIQYTVFDQ
Sbjct: 121 VIVTQPLDTASSKMQTSEFGKSRGLWKTLSEGTWSEAFDGLGISLLLTSNPSIQYTVFDQ 180
Query: 181 LKQRLLRRRLKRETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAIRCKVMLQAAESDE 240
LK+RLL R+L +++ E SPEAL AFSAF LGA+SKC+AT +TYPAIRCKV LQAAESDE
Sbjct: 181 LKRRLLERQLSKKSSIESSPEALSAFSAFVLGAVSKCIATCVTYPAIRCKVTLQAAESDE 240
Query: 241 DGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKTSW 300
I + + K T+S AL SIWK EG GF+KG+ AQ LKTVLSSAL LMIKEKI+KT+W
Sbjct: 241 SEIEEVQAKTK-TISGALYSIWKNEGSAGFFKGLLAQNLKTVLSSALHLMIKEKISKTTW 299
Query: 301 VLLLALQKILSTTHGRLKS 319
L+LAL++ L T R+KS
Sbjct: 300 FLMLALKRYLFVTRSRIKS 318
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449481059|ref|XP_004156069.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial substrate carrier family protein Q-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449444791|ref|XP_004140157.1| PREDICTED: mitochondrial substrate carrier family protein Q-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|225432570|ref|XP_002281134.1| PREDICTED: mitochondrial substrate carrier family protein Q [Vitis vinifera] gi|297737006|emb|CBI26207.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356574392|ref|XP_003555332.1| PREDICTED: peroxisomal membrane protein PMP34-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|255552307|ref|XP_002517198.1| peroxisomal membrane protein pmp34, putative [Ricinus communis] gi|223543833|gb|EEF45361.1| peroxisomal membrane protein pmp34, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|388519031|gb|AFK47577.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
| >gi|147801320|emb|CAN77030.1| hypothetical protein VITISV_015341 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225450977|ref|XP_002284763.1| PREDICTED: peroxisomal membrane protein PMP34 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224131524|ref|XP_002328561.1| predicted protein [Populus trichocarpa] gi|222838276|gb|EEE76641.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 320 | ||||||
| TAIR|locus:2096344 | 322 | PNC1 "peroxisomal adenine nucl | 0.990 | 0.984 | 0.665 | 1.1e-110 | |
| UNIPROTKB|B6ZJZ9 | 318 | PNC1 "Peroxisomal adenine nucl | 0.990 | 0.996 | 0.683 | 2.9e-110 | |
| TAIR|locus:2146355 | 321 | PNC2 "peroxisomal adenine nucl | 0.981 | 0.978 | 0.668 | 2.6e-109 | |
| DICTYBASE|DDB_G0272346 | 329 | mcfQ "mitochondrial substrate | 0.937 | 0.911 | 0.273 | 1.8e-32 | |
| ASPGD|ASPL0000056747 | 336 | antA [Emericella nidulans (tax | 0.896 | 0.854 | 0.336 | 1.6e-31 | |
| CGD|CAL0000514 | 345 | ANT1 [Candida albicans (taxid: | 0.815 | 0.756 | 0.297 | 1.4e-27 | |
| FB|FBgn0052250 | 314 | CG32250 [Drosophila melanogast | 0.862 | 0.878 | 0.319 | 6.6e-26 | |
| ZFIN|ZDB-GENE-070620-4 | 312 | slc25a17 "solute carrier famil | 0.912 | 0.935 | 0.273 | 5.9e-25 | |
| UNIPROTKB|E1BSN0 | 335 | SLC25A17 "Uncharacterized prot | 0.862 | 0.823 | 0.288 | 2e-24 | |
| MGI|MGI:1342248 | 307 | Slc25a17 "solute carrier famil | 0.871 | 0.908 | 0.273 | 3.3e-24 |
| TAIR|locus:2096344 PNC1 "peroxisomal adenine nucleotide carrier 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1093 (389.8 bits), Expect = 1.1e-110, P = 1.1e-110
Identities = 215/323 (66%), Positives = 266/323 (82%)
Query: 1 MGFDLESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRARHQQKYRNISDVLWEAIST 60
MG DLES+S+ATSGAIG+L+STTILYPLDTCK+K+QAEVRAR QQKYR +SDV+WEAIS
Sbjct: 1 MGVDLESVSEATSGAIGSLLSTTILYPLDTCKSKFQAEVRARGQQKYRYLSDVMWEAISK 60
Query: 61 RQVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTRANLIVAAAAGACT 120
QV SLYQGLGTKN QSFISQFIYFY YS+FKR++ +++G+KSIGT+ANL++AAAAGACT
Sbjct: 61 GQVFSLYQGLGTKNFQSFISQFIYFYSYSYFKRVHSERTGSKSIGTKANLLIAAAAGACT 120
Query: 121 VIVTQPLDTASSRMQTSEFGKSKGLWKSLSESTWSEAFDGLGISLLLTSNPSIQYTVFDX 180
++ QPLDTASSRMQTSEFG+SKGLWK+L+E +W++AFDGLGISLLLTSNP+IQYTVFD
Sbjct: 121 SVLIQPLDTASSRMQTSEFGESKGLWKTLTEGSWADAFDGLGISLLLTSNPAIQYTVFDQ 180
Query: 181 XXXXXXXXXXX-XETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAIRCKVMLQAAESD 239
E G SP L AF AF LGA+SK VAT LTYPAIRCKVM+QAA+
Sbjct: 181 LKQHLLKQKNAKAENGS--SPVVLSAFMAFVLGAVSKSVATVLTYPAIRCKVMIQAADES 238
Query: 240 EDGINQAPQRN-KNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKT 298
++ + P+R + T+ + +IW++EG LGF+KG+QAQILKTVLSSALLLMIKEKIT T
Sbjct: 239 KENETKKPRRRTRKTIPGVVYAIWRKEGMLGFFKGLQAQILKTVLSSALLLMIKEKITAT 298
Query: 299 SWVLLLALQK--ILSTTHGRLKS 319
+W+L+LA+++ L+ T G+L+S
Sbjct: 299 TWILILAIRRTLFLTNTKGKLRS 321
|
|
| UNIPROTKB|B6ZJZ9 PNC1 "Peroxisomal adenine nucleotide carrier 1" [Glycine max (taxid:3847)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2146355 PNC2 "peroxisomal adenine nucleotide carrier 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0272346 mcfQ "mitochondrial substrate carrier family protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000056747 antA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| CGD|CAL0000514 ANT1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0052250 CG32250 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-070620-4 slc25a17 "solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BSN0 SLC25A17 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1342248 Slc25a17 "solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 320 | |||
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 1e-12 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 2e-12 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 1e-06 | |
| PTZ00169 | 300 | PTZ00169, PTZ00169, ADP/ATP transporter on adenyla | 2e-06 | |
| PTZ00168 | 259 | PTZ00168, PTZ00168, mitochondrial carrier protein; | 5e-05 |
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 1e-12
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 201 EALPAFSAFFLGALSKCVATFLTYPAIRCKVMLQAAESDEDGINQAPQRNKNTVSDALCS 260
L ++ G ++ +A +TYP K LQ++ + R + D
Sbjct: 1 SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAA-------GGSRKYKGILDCFKK 53
Query: 261 IWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKI 295
I+K EG G YKG+ +L+ ++A+ E +
Sbjct: 54 IYKEEGIRGLYKGLLPNLLRVAPAAAIYFGTYETL 88
|
Length = 96 |
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
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| >gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 320 | |||
| KOG0764 | 299 | consensus Mitochondrial FAD carrier protein [Energ | 100.0 | |
| KOG0752 | 320 | consensus Mitochondrial solute carrier protein [En | 100.0 | |
| KOG0753 | 317 | consensus Mitochondrial fatty acid anion carrier p | 100.0 | |
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 100.0 | |
| KOG0759 | 286 | consensus Mitochondrial oxoglutarate/malate carrie | 100.0 | |
| KOG0754 | 294 | consensus Mitochondrial oxodicarboxylate carrier p | 100.0 | |
| KOG0758 | 297 | consensus Mitochondrial carnitine-acylcarnitine ca | 100.0 | |
| KOG0760 | 302 | consensus Mitochondrial carrier protein MRS3/4 [En | 100.0 | |
| KOG0757 | 319 | consensus Mitochondrial carrier protein - Rim2p/Mr | 100.0 | |
| KOG0751 | 694 | consensus Mitochondrial aspartate/glutamate carrie | 100.0 | |
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 100.0 | |
| KOG0762 | 311 | consensus Mitochondrial carrier protein [Energy pr | 100.0 | |
| KOG0769 | 308 | consensus Predicted mitochondrial carrier protein | 100.0 | |
| KOG0761 | 361 | consensus Mitochondrial carrier protein CGI-69 [En | 100.0 | |
| KOG0749 | 298 | consensus Mitochondrial ADP/ATP carrier proteins [ | 100.0 | |
| KOG0768 | 323 | consensus Mitochondrial carrier protein PET8 [Ener | 100.0 | |
| KOG0766 | 297 | consensus Predicted mitochondrial carrier protein | 100.0 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 100.0 | |
| KOG0755 | 320 | consensus Mitochondrial oxaloacetate carrier prote | 100.0 | |
| KOG0750 | 304 | consensus Mitochondrial solute carrier protein [En | 100.0 | |
| KOG0756 | 299 | consensus Mitochondrial tricarboxylate/dicarboxyla | 100.0 | |
| KOG0763 | 301 | consensus Mitochondrial ornithine transporter [Ene | 100.0 | |
| KOG0765 | 333 | consensus Predicted mitochondrial carrier protein | 100.0 | |
| KOG0770 | 353 | consensus Predicted mitochondrial carrier protein | 100.0 | |
| KOG0767 | 333 | consensus Mitochondrial phosphate carrier protein | 100.0 | |
| KOG0752 | 320 | consensus Mitochondrial solute carrier protein [En | 100.0 | |
| KOG0764 | 299 | consensus Mitochondrial FAD carrier protein [Energ | 100.0 | |
| KOG0753 | 317 | consensus Mitochondrial fatty acid anion carrier p | 99.97 | |
| KOG0757 | 319 | consensus Mitochondrial carrier protein - Rim2p/Mr | 99.97 | |
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 99.97 | |
| KOG0768 | 323 | consensus Mitochondrial carrier protein PET8 [Ener | 99.97 | |
| KOG0760 | 302 | consensus Mitochondrial carrier protein MRS3/4 [En | 99.97 | |
| KOG0759 | 286 | consensus Mitochondrial oxoglutarate/malate carrie | 99.97 | |
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 99.97 | |
| KOG0762 | 311 | consensus Mitochondrial carrier protein [Energy pr | 99.96 | |
| KOG0758 | 297 | consensus Mitochondrial carnitine-acylcarnitine ca | 99.96 | |
| KOG0761 | 361 | consensus Mitochondrial carrier protein CGI-69 [En | 99.95 | |
| KOG0754 | 294 | consensus Mitochondrial oxodicarboxylate carrier p | 99.95 | |
| KOG0767 | 333 | consensus Mitochondrial phosphate carrier protein | 99.94 | |
| KOG0770 | 353 | consensus Predicted mitochondrial carrier protein | 99.94 | |
| KOG0766 | 297 | consensus Predicted mitochondrial carrier protein | 99.93 | |
| KOG0765 | 333 | consensus Predicted mitochondrial carrier protein | 99.92 | |
| KOG0763 | 301 | consensus Mitochondrial ornithine transporter [Ene | 99.92 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 99.92 | |
| KOG0756 | 299 | consensus Mitochondrial tricarboxylate/dicarboxyla | 99.92 | |
| KOG0751 | 694 | consensus Mitochondrial aspartate/glutamate carrie | 99.92 | |
| KOG0769 | 308 | consensus Predicted mitochondrial carrier protein | 99.92 | |
| KOG0755 | 320 | consensus Mitochondrial oxaloacetate carrier prote | 99.91 | |
| KOG0749 | 298 | consensus Mitochondrial ADP/ATP carrier proteins [ | 99.91 | |
| KOG0750 | 304 | consensus Mitochondrial solute carrier protein [En | 99.9 | |
| KOG1519 | 297 | consensus Predicted mitochondrial carrier protein | 99.9 | |
| KOG2745 | 321 | consensus Mitochondrial carrier protein [General f | 99.87 | |
| KOG2954 | 427 | consensus Mitochondrial carrier protein [General f | 99.8 | |
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.75 | |
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.69 | |
| KOG2745 | 321 | consensus Mitochondrial carrier protein [General f | 99.49 | |
| KOG1519 | 297 | consensus Predicted mitochondrial carrier protein | 99.37 | |
| KOG2954 | 427 | consensus Mitochondrial carrier protein [General f | 98.44 |
| >KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-57 Score=374.39 Aligned_cols=283 Identities=27% Similarity=0.390 Sum_probs=251.7
Q ss_pred chHHHHHHHHHHHHHHHhhhchhhhhhhHhhhcccc-ccccCCCCHHHHHHHHHHhcChhhhccccchhhhhHHHHHHHH
Q 020889 6 ESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRA-RHQQKYRNISDVLWEAISTRQVLSLYQGLGTKNLQSFISQFIY 84 (320)
Q Consensus 6 ~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~Q~~~~~-~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~~~ 84 (320)
..+..+++|..+|+++.++.||||++|+|.|++... ...+.|++.+++++.|++.||++|||||+.|.+++..++++++
T Consensus 4 ~~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiY 83 (299)
T KOG0764|consen 4 VQWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLY 83 (299)
T ss_pred cchhhhhhhhhhhhhhhhhccchhHhhhhhhhccCccccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHH
Confidence 356677999999999999999999999999998433 3567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhHhhhcCcHHHHHHhHhccCC--------CCchHHHHHHHhhchhh
Q 020889 85 FYGYSFFKRLYLQKSGNKSIGTRANLIVAAAAGACTVIVTQPLDTASSRMQTSEF--------GKSKGLWKSLSESTWSE 156 (320)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~ik~r~q~~~~--------~~~~~~~~i~~~~G~~~ 156 (320)
|.+|+.+|.+.....++...+...++.+++.||+++.++++|+.++|+|+|.+.. +.++++++++++||++|
T Consensus 84 F~~Y~~~K~~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~~~~~Y~~~f~a~rki~k~EG~rg 163 (299)
T KOG0764|consen 84 FFFYDFLKSFITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNVQSTAYKGMFDALRKIYKEEGFRG 163 (299)
T ss_pred HHHHHHHHHHHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccccccccccHHHHHHHHHHHHhHHH
Confidence 9999999999977666555688999999999999999999999999999998763 23478899999999999
Q ss_pred hcccccccccccccchhhHHHHHHHHHHHHHhhccccCCCCCCCCCCChHHHHHHHHHHHHHHhhhcchhHHhHHHHhcc
Q 020889 157 AFDGLGISLLLTSNPSIQYTVFDQLKQRLLRRRLKRETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAIRCKVMLQAA 236 (320)
Q Consensus 157 ly~G~~~~~~~~~~~~~~f~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~P~d~vk~r~q~~ 236 (320)
||+|+.|.++.+.+.+++|..||.+|.++.+.. +.......+...++..+.++.++++.+|||++|+|+|||.+
T Consensus 164 LY~GlVP~L~GvshgAiQF~~YE~lK~~~~~~~------~~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~ 237 (299)
T KOG0764|consen 164 LYKGLVPGLLGVSHGAIQFPAYEELKLRKNRKQ------GRSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQ 237 (299)
T ss_pred HHhhhhhHhhhhchhhhhhhhHHHHHHHHHHhc------CCCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhc
Confidence 999999999999999999999999999987543 11122334566777777799999999999999999999998
Q ss_pred cCCcccCCCCCCCCCCCHHHHHHHHHhhcCccccccchhhhhHHHHhhhhHHHHHHHHHHHHHHHHH
Q 020889 237 ESDEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKTSWVLL 303 (320)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~~~~~i~~~~ye~~~~~~~~~~ 303 (320)
... +.|+++++|+++++++||++|||||+.++++|.+|.++|+|.+||.+++++..+.
T Consensus 238 ~~~---------~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv~~~L~~~~ 295 (299)
T KOG0764|consen 238 SDN---------PRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENVKHFLVTHR 295 (299)
T ss_pred ccC---------cccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHHHHHHhccc
Confidence 642 4699999999999999999999999999999999999999999999999876553
|
|
| >KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2745 consensus Mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2954 consensus Mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >KOG2745 consensus Mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2954 consensus Mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 320 | ||||
| 1okc_A | 297 | Structure Of Mitochondrial AdpATP CARRIER IN COMPLE | 6e-10 | ||
| 2lck_A | 303 | Structure Of The Mitochondrial Uncoupling Protein 2 | 4e-07 |
| >pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 | Back alignment and structure |
|
| >pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 320 | |||
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 5e-34 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 2e-18 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 2e-12 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 8e-10 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 3e-28 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 1e-21 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 6e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-05 |
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 5e-34
Identities = 68/310 (21%), Positives = 129/310 (41%), Gaps = 40/310 (12%)
Query: 5 LESLSDATSGAIGALVSTTILYPLDTCKTKYQ---AEVRARHQQKYRNISDVLWEAISTR 61
L L D +G + A +S T + P++ K Q A + +++Y+ I D + +
Sbjct: 5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQ 64
Query: 62 QVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTR---ANLIVAAAAGA 118
LS ++G ++ F +Q + F +K+++L R NL AAGA
Sbjct: 65 GFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGA 124
Query: 119 CTVIVTQPLDTASSRMQT-----SEFGKSKGLWKSLSESTWSEA-----FDGLGISLL-L 167
++ PLD A +R+ + + GL ++ + + G +S+ +
Sbjct: 125 TSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCIT-KIFKSDGLRGLYQGFNVSVQGI 183
Query: 168 TSNPSIQYTVFDQLKQRLLRRRLKRETGKEPSPEALPAFSAFFLGALSKCVATFLTYPA- 226
+ + V+D K L P P+ + ++ + VA ++YP
Sbjct: 184 IIYRAAYFGVYDTAKGML------------PDPKNVHIIVSWMIAQTVTAVAGLVSYPFD 231
Query: 227 -IRCKVMLQAAESDEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSS 285
+R ++M+Q+ G A TV D I K EGP F+KG + +L+ +
Sbjct: 232 TVRRRMMMQS------GRKGADIMYTGTV-DCWRKIAKDEGPKAFFKGAWSNVLR-GMGG 283
Query: 286 ALLLMIKEKI 295
A +L++ ++I
Sbjct: 284 AFVLVLYDEI 293
|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 320 | |||
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 100.0 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 100.0 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 100.0 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 100.0 |
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-54 Score=382.08 Aligned_cols=277 Identities=21% Similarity=0.314 Sum_probs=235.8
Q ss_pred CcchHHHHHHHHHHHHHHHhhhchhhhhhhHhhhccccc---cccCCCCHHHHHHHHHHhcChhhhccccchhhhhHHHH
Q 020889 4 DLESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRAR---HQQKYRNISDVLWEAISTRQVLSLYQGLGTKNLQSFIS 80 (320)
Q Consensus 4 ~~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~Q~~~~~~---~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~ 80 (320)
+.+.+..+++|++|++++.+++||+|+||+|+|++.+.. ....|++.++++++|+++||++|||||+.+++++.+++
T Consensus 4 ~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~ 83 (297)
T 1okc_A 4 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT 83 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHH
Confidence 456788999999999999999999999999999986422 23568999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCC---CChHHHHHHHHHHHHhHhhhcCcHHHHHHhHhccCC---------CCchHHHHH
Q 020889 81 QFIYFYGYSFFKRLYLQKSGNKS---IGTRANLIVAAAAGACTVIVTQPLDTASSRMQTSEF---------GKSKGLWKS 148 (320)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~a~~~~~~i~~P~d~ik~r~q~~~~---------~~~~~~~~i 148 (320)
.+++|.+||.+++.+....+..+ ......+++|++||+++.++++|+|++|+|+|++.. +..+.++++
T Consensus 84 ~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i 163 (297)
T 1okc_A 84 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKI 163 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHH
Confidence 99999999999985433222111 124577899999999999999999999999998742 123678889
Q ss_pred HHhhchhhhcccccccccc-cccchhhHHHHHHHHHHHHHhhccccCCCCCCCCCCChHHHHHHHHHHHHHHhhhcchhH
Q 020889 149 LSESTWSEAFDGLGISLLL-TSNPSIQYTVFDQLKQRLLRRRLKRETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAI 227 (320)
Q Consensus 149 ~~~~G~~~ly~G~~~~~~~-~~~~~~~f~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~P~d 227 (320)
+++||+++||||+.++++| ++..+++|.+||.+|+.+.+. ...+....+++|++||+++.++++|+|
T Consensus 164 ~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~------------~~~~~~~~~~~g~~ag~~a~~~t~P~d 231 (297)
T 1okc_A 164 FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP------------KNVHIIVSWMIAQTVTAVAGLVSYPFD 231 (297)
T ss_dssp HHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG------------GCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC------------CCccHHHHHHHHHHHHHHHHHhcChHH
Confidence 9999999999999999999 999999999999999865322 124567889999999999999999999
Q ss_pred HhHHHHhcccCCcccCCCCCCCCCCCHHHHHHHHHhhcCccccccchhhhhHHHHhhhhHHHHHHHHHHHH
Q 020889 228 RCKVMLQAAESDEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKITKT 298 (320)
Q Consensus 228 ~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~~~~~i~~~~ye~~~~~ 298 (320)
+||+|+|.+.... .....|.++++|+++|+++||++|||||+.++++|. +.++++|.+||.+|+.
T Consensus 232 vvktr~q~~~~~~-----~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~-~~~~~~f~~ye~~k~~ 296 (297)
T 1okc_A 232 TVRRRMMMQSGRK-----GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRG-MGGAFVLVLYDEIKKF 296 (297)
T ss_dssp HHHHHHHTTTTCC-----GGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHH-HHHHHHHHHHHTC---
T ss_pred HHHHHHhhcCCCC-----CCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhh-ccceeeehHHHHHHhh
Confidence 9999999975432 123469999999999999999999999999999996 5789999999999875
|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 320 | ||||
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 2e-23 | |
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 8e-09 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Score = 95.9 bits (237), Expect = 2e-23
Identities = 62/302 (20%), Positives = 116/302 (38%), Gaps = 24/302 (7%)
Query: 5 LESLSDATSGAIGALVSTTILYPLDTCKTKYQAE---VRARHQQKYRNISDVLWEAISTR 61
L L D +G + A +S T + P++ K Q + + +++Y+ I D + +
Sbjct: 4 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQ 63
Query: 62 QVLSLYQGLGTKNLQSFISQFIYFYGYSFFKRLYLQKSGNKSIGTR---ANLIVAAAAGA 118
LS ++G ++ F +Q + F +K+++L R NL AAGA
Sbjct: 64 GFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGA 123
Query: 119 CTVIVTQPLDTASSRMQTS-----EFGKSKGLWKSLSESTWSEAFDGLGISLLLTSNPSI 173
++ PLD A +R+ + GL +++ S+ GL ++ I
Sbjct: 124 TSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGII 183
Query: 174 QYTVFDQLKQRLLRRRLKRETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAIRCKVML 233
Y + L ++ + VA ++YP + +
Sbjct: 184 IYRAAYFGVYDTAKGMLPDPKNVHI-------IVSWMIAQTVTAVAGLVSYPFDTVRRRM 236
Query: 234 QAAESDEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKE 293
+ G A TV D I K EGP F+KG + +L+ + A +L++ +
Sbjct: 237 MM----QSGRKGADIMYTGTV-DCWRKIAKDEGPKAFFKGAWSNVLRGM-GGAFVLVLYD 290
Query: 294 KI 295
+I
Sbjct: 291 EI 292
|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 320 | |||
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 100.0 | |
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 99.96 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00 E-value=1.5e-50 Score=355.80 Aligned_cols=274 Identities=20% Similarity=0.300 Sum_probs=239.6
Q ss_pred CcchHHHHHHHHHHHHHHHhhhchhhhhhhHhhhccccc---cccCCCCHHHHHHHHHHhcChhhhccccchhhhhHHHH
Q 020889 4 DLESLSDATSGAIGALVSTTILYPLDTCKTKYQAEVRAR---HQQKYRNISDVLWEAISTRQVLSLYQGLGTKNLQSFIS 80 (320)
Q Consensus 4 ~~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~Q~~~~~~---~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~ 80 (320)
+++.++++++|++|++++.+++||||+||+|+|++.... ....+++.++++++++++||+++||||+.+.+++..++
T Consensus 3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~ 82 (292)
T d1okca_ 3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT 82 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcc
Confidence 567889999999999999999999999999999987532 45678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCC---ChHHHHHHHHHHHHhHhhhcCcHHHHHHhHhccCCC---------CchHHHHH
Q 020889 81 QFIYFYGYSFFKRLYLQKSGNKSI---GTRANLIVAAAAGACTVIVTQPLDTASSRMQTSEFG---------KSKGLWKS 148 (320)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~a~~~~~~i~~P~d~ik~r~q~~~~~---------~~~~~~~i 148 (320)
..++|..|+.++..+.......+. .....+.+|.+|++++.++++|+|++|+|+|.+... ..+.++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~ 162 (292)
T d1okca_ 83 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKI 162 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHH
T ss_pred cchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHh
Confidence 999999999999988765542221 235668899999999999999999999999987632 13567889
Q ss_pred HHhhchhhhcccccccccc-cccchhhHHHHHHHHHHHHHhhccccCCCCCCCCCCChHHHHHHHHHHHHHHhhhcchhH
Q 020889 149 LSESTWSEAFDGLGISLLL-TSNPSIQYTVFDQLKQRLLRRRLKRETGKEPSPEALPAFSAFFLGALSKCVATFLTYPAI 227 (320)
Q Consensus 149 ~~~~G~~~ly~G~~~~~~~-~~~~~~~f~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~P~d 227 (320)
+++||+++||+|+.+++++ +++.+++|..||.+|+.+.+. ........++++.+++.+++++++|+|
T Consensus 163 ~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~------------~~~~~~~~~~~~~~~~~~a~~~t~P~d 230 (292)
T d1okca_ 163 FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP------------KNVHIIVSWMIAQTVTAVAGLVSYPFD 230 (292)
T ss_dssp HHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG------------GCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccchhhhhccccccccceehHhhhhhhhccchhhhcccc------------cccchHHHHHHHHHHHHHHhhccccHH
Confidence 9999999999999999998 999999999999999765433 235678889999999999999999999
Q ss_pred HhHHHHhcccCCcccCCCCCCCCCCCHHHHHHHHHhhcCccccccchhhhhHHHHhhhhHHHHHHHHH
Q 020889 228 RCKVMLQAAESDEDGINQAPQRNKNTVSDALCSIWKREGPLGFYKGIQAQILKTVLSSALLLMIKEKI 295 (320)
Q Consensus 228 ~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~~~~~i~~~~ye~~ 295 (320)
|||+|+|.+.... .....|.++++|+++++++||++|||||+.++++|.++ ++++|.+||.+
T Consensus 231 vvktR~q~~~~~~-----~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l 292 (292)
T d1okca_ 231 TVRRRMMMQSGRK-----GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI 292 (292)
T ss_dssp HHHHHHHTTTTCC-----GGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred HHHHHHHhcCCCC-----CCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence 9999999987643 23456999999999999999999999999999999766 68899999963
|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|