Citrus Sinensis ID: 020892

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Protein Sequence
MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGGLEELEKEISKRIKSYNRVPK
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHEHHEEEEccEEccccccccccccHHHHHHHHHHHHcccccccccccEEEEcccHHHHHccHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcEEEcccccccccccHHHHHHHHHHHHHHccccccccEEEEEcccHHHHcccHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MAVGLLAAivpkpfcllttklqpssllttkpaplfaplgthrgffngknrrklnSFTVCFVLEEKKQSTQIETFteeeeeesgtqISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWwqmeggevplaEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKVIFGIslqshhrpregpfelnDVFAIINAVPAIALLSFgffhkglvpglcfgaglgITVFGMAYMFVHDglvhkrfpvgpiadvpyfRRVAAAHQlhhsdkfhgvpyglflgpkeleevgglEELEKEISKRIKSYNRVPK
Flexible Loop (DISEMBL)
MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGthrgffngknrrKLNSFTVCFVleekkqstqietfteeeeeesgtqistAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEvggleelekeiskriksynrvpk
Low Complexity Region (SEG)
MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKqstqietfteeeeeesgtqistAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFlgpkeleevggleelekeISKRIKSYNRVPK
Disordered region (IsUnstruct)
**VGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLE**************************************ERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELE************************
Disordered Region (DISOPRED)
*****L*AIVP********************APLFAPLGT*************NSFTVCF**********************************************LVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELE************************
Disordered Region (DISEMBL)
MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQ********************TAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGGLEELEKEISKRIKSYNRVPK
Disordered Region (DISPRO)
***GLLAAIVPKPFCLLTT*LQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEE**********************S*AARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGGLEELEKEISKRIKSYN****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGGLEELEKEISKRIKSYNRVPK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	320	2.2.26 [Sep-21-2011]
B3SGL0	320	Beta-carotene 3-hydroxyla	N/A	no	0.796	0.796	0.756	1e-117
Q9SZZ8	310	Beta-carotene 3-hydroxyla	yes	no	0.803	0.829	0.747	1e-116
O49815	315	Beta-carotene hydroxylase	N/A	no	0.959	0.974	0.644	1e-115
O49814	316	Beta-carotene hydroxylase	N/A	no	0.887	0.898	0.735	1e-113
Q9LTG0	303	Beta-carotene 3-hydroxyla	no	no	0.818	0.864	0.736	1e-110
Q9SPK6	322	Beta-carotene 3-hydroxyla	N/A	no	0.615	0.611	0.528	7e-59
Q01332	176	Beta-carotene hydroxylase	N/A	no	0.475	0.863	0.359	1e-16
P21688	175	Beta-carotene hydroxylase	yes	no	0.353	0.645	0.388	2e-15
Q44262	162	Beta-carotene hydroxylase	N/A	no	0.409	0.808	0.344	1e-12
P54973	162	Beta-carotene hydroxylase	N/A	no	0.412	0.814	0.335	3e-12

>sp|B3SGL0|BCH_GENLU Beta-carotene 3-hydroxylase, chloroplastic OS=Gentiana lutea GN=BHY PE=2 SV=1

 Score =  422 bits (1084), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/271 (75%), Positives = 235/271 (86%), Gaps = 16/271 (5%)

Query: 51  RKLNSFTVCFVLEEKKQSTQIETFTEEEE------EESGTQISTAA-RVAEKLARKRSER 103
           R     TVCFVLEEK+   ++   +++++      ++   +IS +A ++A+KLARK+SER
Sbjct: 56  RSKPRLTVCFVLEEKELRGKLVVASDDDDGAGEVRKQREKEISASAEKLAQKLARKKSER 115

Query: 104 FTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARW 163
           FTYLVAAVMSSFGITSMAV++VYYRF WQMEGGE+PL+EMFGTFALSVGAAVGMEFWARW
Sbjct: 116 FTYLVAAVMSSFGITSMAVLSVYYRFSWQMEGGEIPLSEMFGTFALSVGAAVGMEFWARW 175

Query: 164 AHKALWHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKG 223
           AH+ALWHASLWHMHE         SHH+PREGPFELND+FAIINAVPAIALLS+GFFHKG
Sbjct: 176 AHEALWHASLWHMHE---------SHHKPREGPFELNDIFAIINAVPAIALLSYGFFHKG 226

Query: 224 LVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHG 283
           L+PGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAH LHHSDKF+G
Sbjct: 227 LIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHTLHHSDKFNG 286

Query: 284 VPYGLFLGPKELEEVGGLEELEKEISKRIKS 314
           VPYGLFLGPKELEEVGGL+ LE EI++R K+
Sbjct: 287 VPYGLFLGPKELEEVGGLQVLEMEINRRTKN 317

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Uses ferredoxin as an electron donor.
Gentiana lutea (taxid: 38851)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 1EC: 2EC: 9

>sp|Q9SZZ8|BCH1_ARATH Beta-carotene 3-hydroxylase 1, chloroplastic OS=Arabidopsis thaliana GN=BETA-OHASE 1 PE=1 SV=1

 Score =  419 bits (1078), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/269 (74%), Positives = 229/269 (85%), Gaps = 12/269 (4%)

Query: 52  KLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQIST---AARVAEKLARKRSERFTYLV 108
           +   F+VC+V+EE++Q++ IE     E   S   I     A R+AEKL RK+SER TYL+
Sbjct: 41  RFKRFSVCYVVEERRQNSPIENDERPESTSSTNAIDAEYLALRLAEKLERKKSERSTYLI 100

Query: 109 AAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKAL 168
           AA++SSFGITSMAVMAVYYRF WQMEGGE+ + EMFGTFALSVGAAVGMEFWARWAH+AL
Sbjct: 101 AAMLSSFGITSMAVMAVYYRFSWQMEGGEISMLEMFGTFALSVGAAVGMEFWARWAHRAL 160

Query: 169 WHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGL 228
           WHASLW+MHE         SHH+PREGPFELNDVFAI+NA PAI LLS+GFF+KGLVPGL
Sbjct: 161 WHASLWNMHE---------SHHKPREGPFELNDVFAIVNAGPAIGLLSYGFFNKGLVPGL 211

Query: 229 CFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGL 288
           CFGAGLGITVFG+AYMFVHDGLVHKRFPVGPIADVPY R+VAAAHQLHH+DKF+GVPYGL
Sbjct: 212 CFGAGLGITVFGIAYMFVHDGLVHKRFPVGPIADVPYLRKVAAAHQLHHTDKFNGVPYGL 271

Query: 289 FLGPKELEEVGGLEELEKEISKRIKSYNR 317
           FLGPKELEEVGG EEL+KEIS+RIKSY +
Sbjct: 272 FLGPKELEEVGGNEELDKEISRRIKSYKK 300

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Has also a low activity toward the beta- and epsilon-rings of alpha-carotene. No activity with acyclic carotenoids such as lycopene and neurosporene. Uses ferredoxin as an electron donor.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|O49815|BCH1_CAPAN Beta-carotene hydroxylase 1, chloroplastic OS=Capsicum annuum GN=CA1 PE=1 SV=1

 Score =  414 bits (1065), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/326 (64%), Positives = 243/326 (74%), Gaps = 19/326 (5%)

Query: 1   MAVGLLAAIVPKPFCLLTTKL-QPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVC 59
           MA  +  +   +  CL       P    T  P   F+PL  +      ++RRK      C
Sbjct: 1   MAAEISISASSRAICLQRNPFPAPKYFATAPPLLFFSPLTCNLDAIL-RSRRK-PRLAAC 58

Query: 60  FVLEEKK-------QSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVM 112
           FVL++ K       + +  E   +E E E+  + S A R+AEK ARK+SERFTYLVAAVM
Sbjct: 59  FVLKDDKLYTAQSGKQSDTEAIGDEIEVETNEEKSLAVRLAEKFARKKSERFTYLVAAVM 118

Query: 113 SSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHAS 172
           SS GITSMAV++VYYRF WQMEGGE+P +EMF TFAL+ GAA+GME+WARWAH+ALWHAS
Sbjct: 119 SSLGITSMAVISVYYRFSWQMEGGEMPFSEMFCTFALAFGAAIGMEYWARWAHRALWHAS 178

Query: 173 LWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 232
           LWHMHE         SHHRPREGPFELND+FAIINAVPAIA  SFGF HKGL+PG+CFGA
Sbjct: 179 LWHMHE---------SHHRPREGPFELNDIFAIINAVPAIAFFSFGFNHKGLIPGICFGA 229

Query: 233 GLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGP 292
           GLGITVFGMAYMFVHDGLVHKRFPVGPIA VPYF+RVAAAHQLHHSDKF GVPYGLFLGP
Sbjct: 230 GLGITVFGMAYMFVHDGLVHKRFPVGPIAKVPYFQRVAAAHQLHHSDKFDGVPYGLFLGP 289

Query: 293 KELEEVGGLEELEKEISKRIKSYNRV 318
           KELEEVG +EELEKE+++RIKS  R+
Sbjct: 290 KELEEVGVIEELEKEVNRRIKSLKRL 315

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Produces beta-cryptoxanthin and zeaxanthin. Uses ferredoxin as an electron donor.

Capsicum annuum (taxid: 4072)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|O49814|BCH2_CAPAN Beta-carotene hydroxylase 2, chloroplastic (Fragment) OS=Capsicum annuum GN=CA2 PE=2 SV=1

 Score =  408 bits (1049), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/302 (73%), Positives = 244/302 (80%), Gaps = 18/302 (5%)

Query: 18  TTKLQPSSLLTTKPAPL------FAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQI 71
           T+  + S  L  KP P         P   + G      RR   SFTVCFVLE+ K  TQ 
Sbjct: 22  TSYYRHSPFLGPKPTPTTPSVYPITPFSPNLGSILRCRRRP--SFTVCFVLEDDKFKTQF 79

Query: 72  ETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWW 131
           E   E+ E +   QIS A R+AEKLARK+SERFTYLVAAVMSSFGITSMAVMAVYYRF+W
Sbjct: 80  EAGEEDIEMKIEEQIS-ATRLAEKLARKKSERFTYLVAAVMSSFGITSMAVMAVYYRFYW 138

Query: 132 QMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKVIFGISLQSHHR 191
           QMEGGEVP +EMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE         SHH+
Sbjct: 139 QMEGGEVPFSEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE---------SHHK 189

Query: 192 PREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLV 251
           PREGPFELNDVFAIINAVPAIALL +GFFHKGL+PGLCFGAGLGITVFGMAYMFVHDGLV
Sbjct: 190 PREGPFELNDVFAIINAVPAIALLDYGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLV 249

Query: 252 HKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGGLEELEKEISKR 311
           HKRFPVGP+A+VPY R+VAAAH LHHS+KF+GVPYGLFLGPKELEEVGGLEELEKE+++R
Sbjct: 250 HKRFPVGPVANVPYLRKVAAAHSLHHSEKFNGVPYGLFLGPKELEEVGGLEELEKEVNRR 309

Query: 312 IK 313
            +
Sbjct: 310 TR 311

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Produces beta-cryptoxanthin and zeaxanthin. Uses ferredoxin as an electron donor.

Capsicum annuum (taxid: 4072)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|Q9LTG0|BCH2_ARATH Beta-carotene 3-hydroxylase 2, chloroplastic OS=Arabidopsis thaliana GN=BETA-OHASE 2 PE=2 SV=1

 Score =  399 bits (1024), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 201/273 (73%), Positives = 231/273 (84%), Gaps = 11/273 (4%)

Query: 45  FNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERF 104
           FNG  RRK+   TVCFV+EE+KQS+ ++   + E   S ++I   +R+ +K  +K+SERF
Sbjct: 37  FNGFRRRKI--LTVCFVVEERKQSSPMDDDNKPESTTSSSEILMTSRLLKKAEKKKSERF 94

Query: 105 TYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWA 164
           TYL+AAVMSSFGITSMA+MAVYYRF WQM+GGEV + EMFGTFALSVGAAVGMEFWARWA
Sbjct: 95  TYLIAAVMSSFGITSMAIMAVYYRFSWQMKGGEVSVLEMFGTFALSVGAAVGMEFWARWA 154

Query: 165 HKALWHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGL 224
           H+ALWH SLW+MHE         SHH+PREG FELNDVFAI NAVPAI LL +GF +KGL
Sbjct: 155 HRALWHDSLWNMHE---------SHHKPREGAFELNDVFAITNAVPAIGLLYYGFLNKGL 205

Query: 225 VPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGV 284
           VPGLCFGAGLGIT+FGMAYMFVHDGLVHKRFPVGPIA+VPY R+VAAAHQLHH+DKF GV
Sbjct: 206 VPGLCFGAGLGITMFGMAYMFVHDGLVHKRFPVGPIANVPYLRKVAAAHQLHHTDKFKGV 265

Query: 285 PYGLFLGPKELEEVGGLEELEKEISKRIKSYNR 317
           PYGLFLGPKE+EEVGG EELEKEIS+RIK YN+
Sbjct: 266 PYGLFLGPKEVEEVGGKEELEKEISRRIKLYNK 298

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Has also a low activity toward the beta- and epsilon-rings of alpha-carotene. No activity with acyclic carotenoids such as lycopene and neurosporene. Uses ferredoxin as an electron donor.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|Q9SPK6|BCH_HAEPL Beta-carotene 3-hydroxylase, chloroplastic (Fragment) OS=Haematococcus pluvialis GN=CRTZ PE=2 SV=1

 Score =  227 bits (579), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 111/210 (52%), Positives = 148/210 (70%), Gaps = 13/210 (6%)

Query: 103 RFTYLVAAVMSSFGITSMAVMAVYYRFWWQME-GGEVPLAEMFGTFALSVGAAVGMEFWA 161
           + +Y  AA+ +S G++ +A+ A Y RF   M  GG VP  E+ GT  L VG A+GME +A
Sbjct: 114 QLSYQAAAIAASIGVSGIAIFATYLRFAMHMTVGGAVPWGEVAGTLLLVVGGALGMEMYA 173

Query: 162 RWAHKALWHASL--WHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGF 219
           R+AHKA+WH S   W +H         +SHH PR GPFE ND+FAIIN +PA+ L +FGF
Sbjct: 174 RYAHKAIWHESPLGWLLH---------KSHHTPRTGPFEANDLFAIINGLPAMLLCTFGF 224

Query: 220 FHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSD 279
           +   ++   CFGAGLGIT++GMAYMFVHDGLVH+RFP GPIA +PY +R+  AHQLHHS 
Sbjct: 225 WLPNVLGAACFGAGLGITLYGMAYMFVHDGLVHRRFPTGPIAGLPYMKRLTVAHQLHHSG 284

Query: 280 KFHGVPYGLFLGPKELEEV-GGLEELEKEI 308
           K+ G P+G+FLGP+EL+ + G  EE+E+ +
Sbjct: 285 KYGGAPWGMFLGPQELQHIPGAAEEVERLV 314

Nonheme diiron monooxygenase involved in the biosynthesis of astaxanthin. Hydroxylates beta-ring of beta-carotene and catalyzes the conversion of canthaxanthin to astaxanthin. Uses ferredoxin as an electron donor.

Haematococcus pluvialis (taxid: 44745)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|Q01332|CRTZ_ESCVU Beta-carotene hydroxylase OS=Escherichia vulneris GN=crtZ PE=3 SV=1

 Score = 87.4 bits (215), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 15/167 (8%)

Query: 153 AAVGMEFWARWAHKALWHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAI 212
           + + ME  A + H+ + H   W  HE         SHH PR+G FELND+FA++ A  AI
Sbjct: 11  SVIAMEGIAAFTHRYIMHGWGWRWHE---------SHHTPRKGVFELNDLFAVVFAGVAI 61

Query: 213 ALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAA 272
           AL++ G    G+ P    G G+  TV+G+ Y  VHDGLVH+R+P   I    Y +R+  A
Sbjct: 62  ALIAVGT--AGVWPLQWIGCGM--TVYGLLYFLVHDGLVHQRWPFHWIPRRGYLKRLYVA 117

Query: 273 HQLHHSDKFH--GVPYGLFLGPKELEEVGGLEELEKEISKRIKSYNR 317
           H+LHH+ +     V +G     K  +    L E      KR  + +R
Sbjct: 118 HRLHHAVRGREGCVSFGFIYARKPADLQAILRERHGRPPKRDAAKDR 164

Catalyzes the hydroxylation reaction from beta-carotene to zeaxanthin.

Escherichia vulneris (taxid: 566)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P21688|CRTZ_PANAN Beta-carotene hydroxylase OS=Pantoea ananas GN=crtZ PE=3 SV=1

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 13/126 (10%)

Query: 155 VGMEFWARWAHKALWHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIAL 214
           +GME  A  AHK + H   W  H          SHH PR+G FE+ND++A++ A  +I L
Sbjct: 15  IGMEVIAALAHKYIMHGWGWGWH---------LSHHEPRKGAFEVNDLYAVVFAALSILL 65

Query: 215 LSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQ 274
           +  G    G+ P    GAG+  T +G+ Y  VHDGLVH+R+P   I    Y +R+  AH+
Sbjct: 66  IYLG--STGMWPLQWIGAGM--TAYGLLYFMVHDGLVHQRWPFRYIPRKGYLKRLYMAHR 121

Query: 275 LHHSDK 280
           +HH+ +
Sbjct: 122 MHHAVR 127

Catalyzes the hydroxylation reaction from beta-carotene to zeaxanthin.

Pantoea ananas (taxid: 553)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q44262|CRTZ_PARS1 Beta-carotene hydroxylase OS=Paracoccus sp. (strain PC1) GN=crtZ PE=3 SV=1

 Score = 74.7 bits (182), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 20/151 (13%)

Query: 147 FALSVGAAVGMEFWARWAHKALWHASL---WHMHEKVIFGISLQSHHRPREGPFELNDVF 203
           F + V   + ME  A   H+ + H  L   WH           +SHH   +   E ND++
Sbjct: 4   FLIVVATVLVMELTAYSVHRWIMHGPLGWGWH-----------KSHHEEHDHALEKNDLY 52

Query: 204 AIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADV 263
            ++ AV A  L + G +     P L + A LG+TV+G+ Y  +HDGLVH+R+P   I   
Sbjct: 53  GVVFAVLATILFTVGAY---WWPVLWWIA-LGMTVYGLIYFILHDGLVHQRWPFRYIPRR 108

Query: 264 PYFRRVAAAHQLHHS--DKFHGVPYGLFLGP 292
            YFRR+  AH+LHH+   + H V +G    P
Sbjct: 109 GYFRRLYQAHRLHHAVEGRDHCVSFGFIYAP 139

Catalyzes the hydroxylation reaction from beta-carotene to zeaxanthin via beta-cryptoxanthin.

Paracoccus sp. (strain PC1) (taxid: 365615)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P54973|CRTZ_PARSN Beta-carotene hydroxylase OS=Paracoccus sp. (strain N81106 / MBIC 01143) GN=crtZ PE=3 SV=1

 Score = 73.2 bits (178), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 75/152 (49%), Gaps = 20/152 (13%)

Query: 146 TFALSVGAAVGMEFWARWAHKALWHASL---WHMHEKVIFGISLQSHHRPREGPFELNDV 202
            F + V   + ME  A   H+ + H  L   WH           +SHH   +   E ND+
Sbjct: 3   NFLIVVATVLVMELTAYSVHRWIMHGPLGWGWH-----------KSHHEEHDHALEKNDL 51

Query: 203 FAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIAD 262
           + ++ AV A  L + G+      P L + A LG+TV+G+ Y  +HDGLVH+R+P   I  
Sbjct: 52  YGLVFAVIATVLFTVGWI---WAPVLWWIA-LGMTVYGLIYFVLHDGLVHQRWPFRYIPR 107

Query: 263 VPYFRRVAAAHQLHHS--DKFHGVPYGLFLGP 292
             Y RR+  AH+LHH+   + H V +G    P
Sbjct: 108 KGYARRLYQAHRLHHAVEGRDHCVSFGFIYAP 139

Catalyzes the hydroxylation reaction from beta-carotene to zeaxanthin via beta-cryptoxanthin.

Paracoccus sp. (strain N81106 / MBIC 01143) (taxid: 81397)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
78711803	311	carotenoid beta-ring hydroxylase [Citrus	0.971	1.0	0.968	1e-166
11245486	311	beta-carotene hydroxylase [Citrus unshiu	0.971	1.0	0.965	1e-166
9988836	311	beta-carotene hydroxylase [Citrus unshiu	0.971	1.0	0.962	1e-161
116874786	311	beta-carotene hydroxylase [Citrus kinoku	0.971	1.0	0.959	1e-161
62912179	311	beta carotene hydoxylase [Citrus maxima]	0.971	1.0	0.956	1e-159
325461582	305	beta-carotene hydroxylase [Carica papaya	0.921	0.967	0.722	1e-123
262036878	310	beta-carotene hydroxylase [Ipomoea nil]	0.943	0.974	0.730	1e-122
225464577	306	PREDICTED: beta-carotene hydroxylase 2,	0.868	0.908	0.763	1e-121
262036874	309	beta-carotene hydroxylase [Ipomoea sp. K	0.956	0.990	0.707	1e-121
262036876	309	beta-carotene hydroxylase [Ipomoea obscu	0.943	0.977	0.716	1e-121

>gi|78711803|gb|ABB49053.1| carotenoid beta-ring hydroxylase [Citrus sinensis]

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 310/320 (96%), Positives = 311/320 (97%), Gaps = 9/320 (2%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60
           MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF
Sbjct: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60

Query: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120
           VLEEKKQSTQIETFT+EEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM
Sbjct: 61  VLEEKKQSTQIETFTDEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120

Query: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKV 180
           AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE  
Sbjct: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE-- 178

Query: 181 IFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFG 240
                  SHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFG
Sbjct: 179 -------SHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFG 231

Query: 241 MAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGG 300
           MAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGG
Sbjct: 232 MAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGG 291

Query: 301 LEELEKEISKRIKSYNRVPK 320
           LEELEKEISKRIKSYNRVPK
Sbjct: 292 LEELEKEISKRIKSYNRVPK 311

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|11245486|gb|AAG33636.1|AF315289_1 beta-carotene hydroxylase [Citrus unshiu]

 Score =  588 bits (1517), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 309/320 (96%), Positives = 310/320 (96%), Gaps = 9/320 (2%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60
           MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTH GFFNGKNRRKLNSFTVCF
Sbjct: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHHGFFNGKNRRKLNSFTVCF 60

Query: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120
           VLEEKKQSTQIETFT+EEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM
Sbjct: 61  VLEEKKQSTQIETFTDEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120

Query: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKV 180
           AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE  
Sbjct: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE-- 178

Query: 181 IFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFG 240
                  SHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFG
Sbjct: 179 -------SHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFG 231

Query: 241 MAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGG 300
           MAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGG
Sbjct: 232 MAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGG 291

Query: 301 LEELEKEISKRIKSYNRVPK 320
           LEELEKEISKRIKSYNRVPK
Sbjct: 292 LEELEKEISKRIKSYNRVPK 311

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9988836|gb|AAG10793.1|AF296158_1 beta-carotene hydroxylase [Citrus unshiu]

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 308/320 (96%), Positives = 309/320 (96%), Gaps = 9/320 (2%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60
           MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGT  GFFNGKNRRK+NSFTVCF
Sbjct: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTRHGFFNGKNRRKINSFTVCF 60

Query: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120
           VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM
Sbjct: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120

Query: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKV 180
           AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE  
Sbjct: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE-- 178

Query: 181 IFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFG 240
                  SHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFG
Sbjct: 179 -------SHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFG 231

Query: 241 MAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGG 300
           MAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGG
Sbjct: 232 MAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGG 291

Query: 301 LEELEKEISKRIKSYNRVPK 320
           LEELEKEISKRIKSYNRVPK
Sbjct: 292 LEELEKEISKRIKSYNRVPK 311

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116874786|emb|CAL63739.1| beta-carotene hydroxylase [Citrus kinokuni]

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 307/320 (95%), Positives = 309/320 (96%), Gaps = 9/320 (2%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60
           MAVGLLAA+VPKPFCLLTTKLQPSSLLTTKPAPLFAPLGT  GFFNGKNRRK+NSFTVCF
Sbjct: 1   MAVGLLAAVVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTRHGFFNGKNRRKINSFTVCF 60

Query: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120
           VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM
Sbjct: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120

Query: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKV 180
           AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE  
Sbjct: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE-- 178

Query: 181 IFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFG 240
                  SHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFG
Sbjct: 179 -------SHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFG 231

Query: 241 MAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGG 300
           MAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGG
Sbjct: 232 MAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGG 291

Query: 301 LEELEKEISKRIKSYNRVPK 320
           LEELEKEISKRIKSYNRVPK
Sbjct: 292 LEELEKEISKRIKSYNRVPK 311

Source: Citrus kinokuni

Species: Citrus kinokuni

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|62912179|gb|AAY21681.1| beta carotene hydoxylase [Citrus maxima]

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 306/320 (95%), Positives = 307/320 (95%), Gaps = 9/320 (2%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60
           MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPL+APLGTH GFFNGKNRRKLNSFTVCF
Sbjct: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLYAPLGTHHGFFNGKNRRKLNSFTVCF 60

Query: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120
           VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM
Sbjct: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120

Query: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKV 180
           AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE  
Sbjct: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE-- 178

Query: 181 IFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFG 240
                  SHHRPREGPFELNDVFAIINAVPAIALLS GFFHKGLVPGLCFGAGLGITVFG
Sbjct: 179 -------SHHRPREGPFELNDVFAIINAVPAIALLSVGFFHKGLVPGLCFGAGLGITVFG 231

Query: 241 MAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGG 300
           MAYMFVHDGLVHKRFPVGPIA VPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEV G
Sbjct: 232 MAYMFVHDGLVHKRFPVGPIAGVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVEG 291

Query: 301 LEELEKEISKRIKSYNRVPK 320
           LEELEKEISKRIKSYNRVPK
Sbjct: 292 LEELEKEISKRIKSYNRVPK 311

Source: Citrus maxima

Species: Citrus maxima

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|325461582|gb|ADZ14893.1| beta-carotene hydroxylase [Carica papaya]

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/324 (72%), Positives = 256/324 (79%), Gaps = 29/324 (8%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAP-----LFAPL--GTHRGFFNGKNRRKL 53
           MA GL AAI  K            S  + +P P     L +PL  G +RG F    R   
Sbjct: 1   MAAGLSAAITLKSL---------GSFHSAQPYPPPKPTLISPLSRGLNRGIFRPHKR--- 48

Query: 54  NSFTVCFVLEEKKQSTQIETFTEE-EEEESGTQISTAARVAEKLARKRSERFTYLVAAVM 112
            +F VCFVLEE+KQ  QIE   EE   ++   +   A+++AEKLARKRSERFTYLVAAVM
Sbjct: 49  TTFAVCFVLEEQKQIAQIENQAEELSSKDVELEQILASKMAEKLARKRSERFTYLVAAVM 108

Query: 113 SSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHAS 172
           SSFGITSMAVMAVYYRF WQMEGGEVP +EMFGTFALSVGAAVGMEFWARWAH+ALWHAS
Sbjct: 109 SSFGITSMAVMAVYYRFAWQMEGGEVPFSEMFGTFALSVGAAVGMEFWARWAHRALWHAS 168

Query: 173 LWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 232
           LWHMHE         SHHRPREGPFELNDVFAI NAVPAIALLS+GFF+KGLVPGLCFGA
Sbjct: 169 LWHMHE---------SHHRPREGPFELNDVFAITNAVPAIALLSYGFFNKGLVPGLCFGA 219

Query: 233 GLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGP 292
           GLGITVFGMAYMFVHDGLVHKRFPVGPIA+VPYFRRVAAAHQLHHSDKF+GVPYGLFLGP
Sbjct: 220 GLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHSDKFNGVPYGLFLGP 279

Query: 293 KELEEVGGLEELEKEISKRIKSYN 316
           KE+E+VGG EELEKEI++R KSY 
Sbjct: 280 KEVEDVGGKEELEKEINRRRKSYK 303

Source: Carica papaya

Species: Carica papaya

Genus: Carica

Family: Caricaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|262036878|dbj|BAI47580.1| beta-carotene hydroxylase [Ipomoea nil]

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/315 (73%), Positives = 258/315 (81%), Gaps = 13/315 (4%)

Query: 1   MAVGL-LAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVC 59
           MAVG+ +AA     +    + ++P++   + P+ LF+PL         ++RRK  S TVC
Sbjct: 1   MAVGISIAASSRTVYSCQFSLVRPATHSASPPSLLFSPLSRRFRSSVLRSRRK-PSLTVC 59

Query: 60  FVLEEKK-QSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGIT 118
           FVLE++K +S  +E   EE E     QIS A+R+AEKLARKRSERFTYLVAAVMSS GIT
Sbjct: 60  FVLEDEKLESGGVEIRAEEIERAIEKQIS-ASRLAEKLARKRSERFTYLVAAVMSSLGIT 118

Query: 119 SMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE 178
           SMAV+AVYYRF WQMEGGEVP  EMFGTFALSVGAAVGMEFWARWAH+ALWHASLWHMHE
Sbjct: 119 SMAVLAVYYRFAWQMEGGEVPYTEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHE 178

Query: 179 KVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITV 238
                    SHHRPREGPFELNDVFAI NAVPAIALLS+GFFHKGLVPGLCFGAGLGITV
Sbjct: 179 ---------SHHRPREGPFELNDVFAITNAVPAIALLSYGFFHKGLVPGLCFGAGLGITV 229

Query: 239 FGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEV 298
           FGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHH+DKF+GVPYGLFLGPKELEEV
Sbjct: 230 FGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHTDKFNGVPYGLFLGPKELEEV 289

Query: 299 GGLEELEKEISKRIK 313
           GGL +LE E+++RIK
Sbjct: 290 GGLNDLEVEVNRRIK 304

Source: Ipomoea nil

Species: Ipomoea nil

Genus: Ipomoea

Family: Convolvulaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464577|ref|XP_002273581.1| PREDICTED: beta-carotene hydroxylase 2, chloroplastic isoform 1 [Vitis vinifera]

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/296 (76%), Positives = 248/296 (83%), Gaps = 18/296 (6%)

Query: 22  QPSSLLTTKPAPLFAP-LGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEE 80
           +P+S  T  P  LF P +  H   F  + + +L   TVCFV+EE+K ST++       EE
Sbjct: 25  KPTSPFT--PTSLFIPSIRRHENIFRCRKKTRL---TVCFVVEEEKLSTEV--VENRSEE 77

Query: 81  ESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPL 140
              +QIS AARVAEKLARKRSER TYLVAAVMSSFGITSMAVMAVYYRF WQMEGGEVPL
Sbjct: 78  TLASQIS-AARVAEKLARKRSERLTYLVAAVMSSFGITSMAVMAVYYRFSWQMEGGEVPL 136

Query: 141 AEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEKVIFGISLQSHHRPREGPFELN 200
           +EMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE         SHH+PREGPFELN
Sbjct: 137 SEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE---------SHHKPREGPFELN 187

Query: 201 DVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPI 260
           DVFAI NAVPAIALLS+GFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVH+RFPVGPI
Sbjct: 188 DVFAITNAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPI 247

Query: 261 ADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGGLEELEKEISKRIKSYN 316
           A+VPYFRRVAAAHQLHHSDKF+GVPYGLFLGPKE+EEVGG +ELEKEI++R +  N
Sbjct: 248 ANVPYFRRVAAAHQLHHSDKFNGVPYGLFLGPKEVEEVGGKDELEKEINRRARLSN 303

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|262036874|dbj|BAI47578.1| beta-carotene hydroxylase [Ipomoea sp. Kenyan]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 225/318 (70%), Positives = 259/318 (81%), Gaps = 12/318 (3%)

Query: 1   MAVGL-LAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVC 59
           MAVG+ +AA     +    + ++P++   + P+ LF+PL + R   +  + R+    TVC
Sbjct: 1   MAVGISIAASSGTVYNCQFSLVRPATHSASPPSLLFSPL-SRRFRSSVLSSRRKPRLTVC 59

Query: 60  FVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITS 119
           FVLE++K  + ++   EE E+    QIS A+R+AEKLARKRSER TYLVAAVMSS GITS
Sbjct: 60  FVLEDEKLESGVQIRAEEIEKAIEKQIS-ASRLAEKLARKRSERSTYLVAAVMSSLGITS 118

Query: 120 MAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEK 179
           MAV++VYYRF WQMEGG VP  EMFGTFALSVGAAVGMEFWARWAH+ALWHASLWHMHE 
Sbjct: 119 MAVLSVYYRFAWQMEGGAVPYTEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHE- 177

Query: 180 VIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVF 239
                   SHH+PREGPFELNDVFAIINAVPAIALLS+GFFHKGLVPGLCFGAGLGITVF
Sbjct: 178 --------SHHKPREGPFELNDVFAIINAVPAIALLSYGFFHKGLVPGLCFGAGLGITVF 229

Query: 240 GMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVG 299
           GMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHH+DKF+GVPYGLFLGPKELEEVG
Sbjct: 230 GMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHTDKFNGVPYGLFLGPKELEEVG 289

Query: 300 GLEELEKEISKRIKSYNR 317
           GL +LE E+S+RIK  +R
Sbjct: 290 GLNDLEVEVSRRIKMSSR 307

Source: Ipomoea sp. Kenyan

Species: Ipomoea sp. Kenyan

Genus: Ipomoea

Family: Convolvulaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|262036876|dbj|BAI47579.1| beta-carotene hydroxylase [Ipomoea obscura]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 225/314 (71%), Positives = 257/314 (81%), Gaps = 12/314 (3%)

Query: 1   MAVGL-LAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVC 59
           MAVG+ +AA     +    + ++P++   + P+ LF+PL + R   +  + R+    TVC
Sbjct: 1   MAVGISIAASSGNVYNCQFSLVRPATHSASPPSLLFSPL-SRRFRSSVLSSRRKPRLTVC 59

Query: 60  FVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITS 119
           FVLE++K  + ++   EE E+    QIS A+R+AEKLARKRSER TYLVAAVMSS GITS
Sbjct: 60  FVLEDEKLESGVQIRAEEIEKAIEKQIS-ASRLAEKLARKRSERSTYLVAAVMSSLGITS 118

Query: 120 MAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHEK 179
           MAV+AVYYRF WQMEGG VP  EMFGTFALSVGAAVGMEFWARWAH+ALWHASLWHMHE 
Sbjct: 119 MAVLAVYYRFAWQMEGGAVPYTEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHE- 177

Query: 180 VIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVF 239
                   SHH+PREGPFELNDVFAIINAVPAIALLS+GFFHKGLVPGLCFGAGLGITVF
Sbjct: 178 --------SHHKPREGPFELNDVFAIINAVPAIALLSYGFFHKGLVPGLCFGAGLGITVF 229

Query: 240 GMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVG 299
           GMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHH+DKF+GVPYGLFLGPKELEEVG
Sbjct: 230 GMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHTDKFNGVPYGLFLGPKELEEVG 289

Query: 300 GLEELEKEISKRIK 313
           GL +LE E+S+RIK
Sbjct: 290 GLNDLEVEVSRRIK 303

Source: Ipomoea obscura

Species: Ipomoea obscura

Genus: Ipomoea

Family: Convolvulaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
TAIR|locus:2131381	310	BETA-OHASE 1 "beta-hydroxylase	0.803	0.829	0.665	5.5e-93
TAIR|locus:2149599	303	BETA-OHASE 2 "beta-carotene hy	0.818	0.864	0.659	1.1e-92

TAIR|locus:2131381 BETA-OHASE 1 "beta-hydroxylase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
 Identities = 179/269 (66%), Positives = 204/269 (75%)

Query:    52 KLNSFTVCFVLEEKKXXXXXXXXX---XXXXXXXXXXXXXAARVAEKLARKRSERFTYLV 108
             +   F+VC+V+EE++                         A R+AEKL RK+SER TYL+
Sbjct:    41 RFKRFSVCYVVEERRQNSPIENDERPESTSSTNAIDAEYLALRLAEKLERKKSERSTYLI 100

Query:   109 AAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKAL 168
             AA++SSFGITSMAVMAVYYRF WQMEGGE+ + EMFGTFALSVGAAVGMEFWARWAH+AL
Sbjct:   101 AAMLSSFGITSMAVMAVYYRFSWQMEGGEISMLEMFGTFALSVGAAVGMEFWARWAHRAL 160

Query:   169 WHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGL 228
             WHASLW+MHE         SHH+PREGPFELNDVFAI+NA PAI LLS+GFF+KGLVPGL
Sbjct:   161 WHASLWNMHE---------SHHKPREGPFELNDVFAIVNAGPAIGLLSYGFFNKGLVPGL 211

Query:   229 CFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGL 288
             CFGAGLGITVFG+AYMFVHDGLVHKRFPVGPIADVPY R+VAAAHQLHH+DKF+GVPYGL
Sbjct:   212 CFGAGLGITVFGIAYMFVHDGLVHKRFPVGPIADVPYLRKVAAAHQLHHTDKFNGVPYGL 271

Query:   289 FXXXXXXXXXXXXXXXXXXISKRIKSYNR 317
             F                  IS+RIKSY +
Sbjct:   272 FLGPKELEEVGGNEELDKEISRRIKSYKK 300

GO:0005506 "iron ion binding" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0010291 "carotene beta-ring hydroxylase activity" evidence=IGI;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016123 "xanthophyll biosynthetic process" evidence=IGI

GO:0016119 "carotene metabolic process" evidence=IGI

TAIR|locus:2149599 BETA-OHASE 2 "beta-carotene hydroxylase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
 Identities = 180/273 (65%), Positives = 203/273 (74%)

Query:    45 FNGKNRRKLNSFTVCFVLEEKKXXXXXXXXXXXXXXXXXXXXXXAARVAEKLARKRSERF 104
             FNG  RRK+   TVCFV+EE+K                       +R+ +K  +K+SERF
Sbjct:    37 FNGFRRRKI--LTVCFVVEERKQSSPMDDDNKPESTTSSSEILMTSRLLKKAEKKKSERF 94

Query:   105 TYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWA 164
             TYL+AAVMSSFGITSMA+MAVYYRF WQM+GGEV + EMFGTFALSVGAAVGMEFWARWA
Sbjct:    95 TYLIAAVMSSFGITSMAIMAVYYRFSWQMKGGEVSVLEMFGTFALSVGAAVGMEFWARWA 154

Query:   165 HKALWHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGL 224
             H+ALWH SLW+MHE         SHH+PREG FELNDVFAI NAVPAI LL +GF +KGL
Sbjct:   155 HRALWHDSLWNMHE---------SHHKPREGAFELNDVFAITNAVPAIGLLYYGFLNKGL 205

Query:   225 VPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGV 284
             VPGLCFGAGLGIT+FGMAYMFVHDGLVHKRFPVGPIA+VPY R+VAAAHQLHH+DKF GV
Sbjct:   206 VPGLCFGAGLGITMFGMAYMFVHDGLVHKRFPVGPIANVPYLRKVAAAHQLHHTDKFKGV 265

Query:   285 PYGLFXXXXXXXXXXXXXXXXXXISKRIKSYNR 317
             PYGLF                  IS+RIK YN+
Sbjct:   266 PYGLFLGPKEVEEVGGKEELEKEISRRIKLYNK 298


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.140   0.452    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      320       280   0.00082  115 3  11 22  0.39    33
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  208 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.72u 0.11s 19.83t   Elapsed:  00:00:01
  Total cpu time:  19.72u 0.11s 19.83t   Elapsed:  00:00:01
  Start:  Fri May 10 14:22:09 2013   End:  Fri May 10 14:22:10 2013

GO:0005506 "iron ion binding" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0010291 "carotene beta-ring hydroxylase activity" evidence=IGI;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016119 "carotene metabolic process" evidence=IGI

GO:0016123 "xanthophyll biosynthetic process" evidence=IGI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O49815	BCH1_CAPAN	1, ., 1, 4, ., 1, 3, ., 1, 2, 9	0.6441	0.9593	0.9746	N/A	no
O49814	BCH2_CAPAN	1, ., 1, 4, ., 1, 3, ., 1, 2, 9	0.7350	0.8875	0.8987	N/A	no
Q9LTG0	BCH2_ARATH	1, ., 1, 4, ., 1, 3, ., 1, 2, 9	0.7362	0.8187	0.8646	no	no
Q9SZZ8	BCH1_ARATH	1, ., 1, 4, ., 1, 3, ., 1, 2, 9	0.7472	0.8031	0.8290	yes	no
B3SGL0	BCH_GENLU	1, ., 1, 4, ., 1, 3, ., 1, 2, 9	0.7564	0.7968	0.7968	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	320
PLN02601	303	PLN02601, PLN02601, beta-carotene hydroxylase	1e-159
pfam04116	114	pfam04116, FA_hydroxylase, Fatty acid hydroxylase	6e-08

>gnl|CDD|178211 PLN02601, PLN02601, beta-carotene hydroxylase

 Score =  446 bits (1148), Expect = e-159
 Identities = 204/273 (74%), Positives = 233/273 (85%), Gaps = 11/273 (4%)

Query: 45  FNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERF 104
           FNG  RRK+   TVCFV+EE+KQS+ +E   + E   S ++I   +R+ +K  +K+SERF
Sbjct: 37  FNGFRRRKI--LTVCFVVEERKQSSPMENDEKPESTTSSSEILMTSRLLKKAEKKKSERF 94

Query: 105 TYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWA 164
           TYL+AAVMSSFGITSMA+MAVYYRF WQM+GGEV + EMFGTFALSVGAAVGMEFWARWA
Sbjct: 95  TYLIAAVMSSFGITSMAIMAVYYRFSWQMKGGEVSMLEMFGTFALSVGAAVGMEFWARWA 154

Query: 165 HKALWHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGL 224
           H+ALWH SLW+MHE         SHH+PREG FELNDVFAI+NAVPAI LL +GFF+KGL
Sbjct: 155 HRALWHDSLWNMHE---------SHHKPREGAFELNDVFAIVNAVPAIGLLYYGFFNKGL 205

Query: 225 VPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGV 284
           VPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIA+VPY R+VAAAHQLHH+DKF GV
Sbjct: 206 VPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYLRKVAAAHQLHHTDKFKGV 265

Query: 285 PYGLFLGPKELEEVGGLEELEKEISKRIKSYNR 317
           PYGLFLGPKE+EEVGG EELEKEIS+RIK YN+
Sbjct: 266 PYGLFLGPKEVEEVGGKEELEKEISRRIKLYNK 298

Length = 303

>gnl|CDD|217907 pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily

 Score = 49.8 bits (119), Expect = 6e-08
 Identities = 26/129 (20%), Positives = 41/129 (31%), Gaps = 17/129 (13%)

Query: 151 VGAAVGMEFWARWAHKAL-WHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAV 209
           +   +  +F   W H+ L     LW  H+          HH            F  + A+
Sbjct: 2   LLGLLLFDFVEYWVHRLLHRVPFLWRFHKV---------HHSDESPNPLTAFRFHPLEAL 52

Query: 210 PAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRV 269
               +         L         LG+ +  + Y+F+H GL     P+       Y    
Sbjct: 53  LLALIPLLLLLL--LFGLHLLVILLGLLLGTLLYLFIHSGLHLWLPPLL-----SYLFVT 105

Query: 270 AAAHQLHHS 278
              H+LHHS
Sbjct: 106 PRYHRLHHS 114

This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins. Length = 114

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	320
PLN02601	303	beta-carotene hydroxylase	100.0
PF04116	114	FA_hydroxylase: Fatty acid hydroxylase superfamily	99.4
PLN02434	237	fatty acid hydroxylase	99.14
COG3000	271	ERG3 Sterol desaturase [Lipid metabolism]	98.41
PLN02869	620	fatty aldehyde decarbonylase	97.42
KOG0539	240	consensus Sphingolipid fatty acid hydroxylase [Lip	97.18
TIGR02230	100	ATPase_gene1 F0F1-ATPase subunit, putative. This m	93.8
KOG0872	312	consensus Sterol C5 desaturase [Lipid transport an	93.02
KOG0873	283	consensus C-4 sterol methyl oxidase [Lipid transpo	88.05
KOG0874	287	consensus Sphingolipid hydroxylase [Lipid transpor	87.26
PF11947	153	DUF3464: Protein of unknown function (DUF3464); In	86.32

>PLN02601 beta-carotene hydroxylase

Probab=100.00  E-value=1.7e-113  Score=800.72  Aligned_cols=299  Identities=70%  Similarity=1.171  Sum_probs=272.6

Q ss_pred             Ccccccc-ccccccccccccccCCCCCCCCCCCCccCCccccccccccccccCCCceeEEEEeccccccccccccchhhh
Q 020892            1 MAVGLLA-AIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEE   79 (320)
Q Consensus         1 ma~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~   79 (320)
                      ||+|||+ |.|+||..  +   ..+..+.|+++..|+|....     .+.||| +++|||||+||+++.+++++.+|+++
T Consensus         1 ma~~~~~~~~t~~~l~--~---~~~~~~~~~~~~~f~~~~~~-----~~~~~~-~~~~~c~v~~~~~~~~~~~~~~~~~~   69 (303)
T PLN02601          1 MAAGLSTIAVTLKPLH--R---SDFRLNHPISLAVFPPSLRF-----NGFRRR-KILTVCFVVEERKQSSPMENDEKPES   69 (303)
T ss_pred             CcccccccccccccCc--c---cCccCCCCcccccCCHHHHh-----hhcccC-CceeEEEEeccccccccccccchhhh
Confidence            8999998 88999843  4   34555556567778886432     112333 56899999999999887877766665


Q ss_pred             hhhhcccchHHHHHHHHHhhhhchhhhhHHHHHHhhhhhHHHHHHHHHhhhhhhcCCCCcHHHHHHHHHHHHHHHHHHHH
Q 020892           80 EESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEF  159 (320)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~r~~ser~tY~~aa~~ss~g~~~~a~~avy~rf~w~~~~g~~p~~eM~~~~~l~vga~v~MEf  159 (320)
                      ++.+++.+.++|++||++||||||+||++||||||+||||||++||||||+|||||||||+.||+++++|+++|+++|||
T Consensus        70 ~~~~~~~~~~~~~~~~~~~k~~er~ty~~aa~~ss~gi~s~a~~a~y~rf~~~~~~g~~p~~em~~~~al~lgtfvgMEf  149 (303)
T PLN02601         70 TTSSSEILMTSRLLKKAEKKKSERFTYLIAAVMSSFGITSMAIMAVYYRFSWQMKGGEVSMLEMFGTFALSVGAAVGMEF  149 (303)
T ss_pred             hhhhhhhhhHHHHHHHHHHhhhhhhHHHHHHHHHhhcHHHHHHHHHHHHHhhccCCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence            55555555679999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhccchhhhhhhcCCCCCCCCCCCCCCCCcchHHHHhhHHHHHHHHHhhhccCCCchhhHHHHhHHHhHh
Q 020892          160 WARWAHKALWHASLWHMHEKVIFGISLQSHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVF  239 (320)
Q Consensus       160 ~A~~aHKylmHG~lW~~H~~~~f~~~h~sHH~p~~g~FE~NDlFaiifAvpAIaLi~~G~~~~g~~~g~~fg~GLGIT~Y  239 (320)
                      ||||+|||||||+||.||+         |||+|++|+||+||+|||+||+|||+|+++|+++.|++|++||++|+|||+|
T Consensus       150 ~Aw~aHKYvMHG~LW~lH~---------sHH~Pr~g~FE~NDlFaVifAvpAIaL~~~G~~~~g~~p~~~fgiGlGITlY  220 (303)
T PLN02601        150 WARWAHRALWHDSLWNMHE---------SHHKPREGAFELNDVFAIVNAVPAIGLLYYGFFNKGLVPGLCFGAGLGITVF  220 (303)
T ss_pred             HHHHHHHHHHHhcchhhhh---------hcCCCCCCCcccccchhhhhHHHHHHHHHHhhccccccHHHHHHHHHhHHHH
Confidence            9999999999999999999         9999999999999999999999999999999998889999999999999999


Q ss_pred             hhHhhhhhceeecCcccCCcCCCcHHHHHHHHHHHhhcCCCCCCcceeEeeecchhhhcCChHHHHHHHHHHhhhccCCC
Q 020892          240 GMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELEEVGGLEELEKEISKRIKSYNRVP  319 (320)
Q Consensus       240 GiaYffvHDglVH~Rfp~g~~~~~pYlrri~~AH~lHH~~Ke~Gv~FG~ll~P~eye~vgg~eeL~~~~~~~~~~~~~~~  319 (320)
                      ||+||||||||||||||+++++|+||+||+++||++||++|++|||||||++|+|||||||.||||||++||+|++++++
T Consensus       221 GiaYffVHDgLVHqRfp~~~~a~~~Y~rrl~~AHklHHa~Ke~Gv~FGfll~P~e~e~vgg~~el~~~~~~~~~~~~~~~  300 (303)
T PLN02601        221 GMAYMFVHDGLVHKRFPVGPIANVPYLRKVAAAHQLHHTDKFKGVPYGLFLGPKEVEEVGGKEELEKEISRRIKLYNKGS  300 (303)
T ss_pred             HHHHHHHhhhhhccccccCCCCCCHHHHHHHHHHHhhccCCcCCccceEEeccHHHHhcCCHHHHHHHHHHHHHhhcccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999988764

>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases

Probab=99.40  E-value=3.2e-13  Score=104.74  Aligned_cols=110  Identities=33%  Similarity=0.626  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhh--hccchhhhhhhcCCCCCCCCCCC-CCCCCcchHHHHhhHHHHHHHHHhhhccCCCchh
Q 020892          151 VGAAVGMEFWARWAHKALWH--ASLWHMHEKVIFGISLQSHHRPR-EGPFELNDVFAIINAVPAIALLSFGFFHKGLVPG  227 (320)
Q Consensus       151 vga~v~MEf~A~~aHKylmH--G~lW~~H~~~~f~~~h~sHH~p~-~g~FE~NDlFaiifAvpAIaLi~~G~~~~g~~~g  227 (320)
                      +++++++|++.|++|| +||  +++|.+|+         .||++. ..++.... +..+.++....+...+...  ..+.
T Consensus         2 ~~~~l~~d~~~Y~~HR-l~H~~~~l~~~H~---------~HH~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~   68 (114)
T PF04116_consen    2 LLGFLLWDFWEYWMHR-LLHKIPFLWRIHK---------VHHSPKNPTPLSAFR-FHPLEALLLALLPLLLPLL--LLPF   68 (114)
T ss_pred             eeeHHHHHHHHHHHHH-HHhcCchHHHHHH---------HHhCCcccCchHHHH-cChHHHHHHHHHHHHHHHH--HHhH
Confidence            5678999999999999 999  56899999         999753 33442222 2222222222222111000  0112


Q ss_pred             hHHHHhHHHhHhhhHhhhhhceeecCcccCCcCCCcHHHHHHHHHHHhhcC
Q 020892          228 LCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHS  278 (320)
Q Consensus       228 ~~fg~GLGIT~YGiaYffvHDglVH~Rfp~g~~~~~pYlrri~~AH~lHH~  278 (320)
                      .+..+.+|++++++.|.+.|+++ +.+.+    +..+|++...+.|++||+
T Consensus        69 ~~~~~~~~~~~~~~~~~~~H~~~-~~~~~----~~~~~~~~~~~~H~~HH~  114 (114)
T PF04116_consen   69 HALAFLLGIALFYLWYIFIHSGY-HHRFP----PRLRYLFVTPRHHDLHHS  114 (114)
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCc-cCCCC----CcchhHhcCHHHHHhhCc
Confidence            24557789999999999999997 43433    456899999999999995

Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process

>PLN02434 fatty acid hydroxylase

Probab=99.14  E-value=2.8e-10  Score=105.55  Aligned_cols=122  Identities=20%  Similarity=0.193  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhh---ccc--hhhhhhhcCCCCCCCCC-CCCC-CCCcchHHHHhhHHHHHHHHHh
Q 020892          145 GTFALSVGAAVGMEFWARWAHKALWHA---SLW--HMHEKVIFGISLQSHHR-PREG-PFELNDVFAIINAVPAIALLSF  217 (320)
Q Consensus       145 ~~~~l~vga~v~MEf~A~~aHKylmHG---~lW--~~H~~~~f~~~h~sHH~-p~~g-~FE~NDlFaiifAvpAIaLi~~  217 (320)
                      ..+++++++++.-.+++|.+||+++|.   +-|  .+|.     +.|..||+ |.+. .+-.-=..+++.+.|...++.+
T Consensus        82 ~~~~~~~~G~~~wtl~EY~lHRflfH~~p~~~~~~~~hf-----llHg~HH~~P~D~~rLv~PP~~~~~l~~~~~~l~~~  156 (237)
T PLN02434         82 AVVLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHY-----LLHGCHHKHPMDGLRLVFPPAATAILCVPFWNLIAL  156 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHH-----HHHHHhhcCCCCCCCeecCcHHHHHHHHHHHHHHHH
Confidence            456778889999999999999999995   222  2333     33449996 6442 1101112233333333222222


Q ss_pred             hhccCCCchhhHHHHhHHHhHhhhHhhhhhceeecCcccCCcCCCcHHHHHHHHHHHhhcCCCCC
Q 020892          218 GFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFH  282 (320)
Q Consensus       218 G~~~~g~~~g~~fg~GLGIT~YGiaYffvHDglVH~Rfp~g~~~~~pYlrri~~AH~lHH~~Ke~  282 (320)
                      -     ..+..+.++..|..+.-++|.++|..+.|.      +++++|+|++++-|..||...++
T Consensus       157 ~-----~~~~~a~~~~~G~l~gYl~Yd~~Hy~lH~~------~p~~~~~r~lkr~H~~HHfk~~~  210 (237)
T PLN02434        157 F-----ATPATAPALFGGGLLGYVMYDCTHYFLHHG------QPSTDVLRNLKKYHLNHHFRDQD  210 (237)
T ss_pred             H-----cchhHHHHHHHHHHHHHHHHHHHHHHHHhc------CcchHHHHHHHHHHHHHcCCCCC
Confidence            1     111222333345555557899999997773      34578999999999999975433

>COG3000 ERG3 Sterol desaturase [Lipid metabolism]

Probab=98.41  E-value=3.1e-06  Score=78.32  Aligned_cols=128  Identities=24%  Similarity=0.363  Sum_probs=79.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhc-cchhhhhhhcCCCCCCCCC-CCCCCC--CcchHH-HHhhH-HHHHHHHHhhhc
Q 020892          147 FALSVGAAVGMEFWARWAHKALWHAS-LWHMHEKVIFGISLQSHHR-PREGPF--ELNDVF-AIINA-VPAIALLSFGFF  220 (320)
Q Consensus       147 ~~l~vga~v~MEf~A~~aHKylmHG~-lW~~H~~~~f~~~h~sHH~-p~~g~F--E~NDlF-aiifA-vpAIaLi~~G~~  220 (320)
                      .+..+.+++.-+++-||+||..=+.. +|.+|+         -||. ++.-++  ..++.+ .++++ .-.+.++++|  
T Consensus        96 ~l~~~~~~~~~D~~~Y~~HR~~H~~~~~w~~H~---------~HH~~~~~~~~t~~~~hp~e~ll~~~~~~~~~~l~~--  164 (271)
T COG3000          96 ALQLLLAFLFLDLGYYWAHRLLHRVPLLWAFHK---------VHHSSEVPDPLTALRFHPLEILLLAFLGLLPLLLLG--  164 (271)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH---------hhcCcccCCchhhhhcChHHHHHHHHHHHHHHHHhc--
Confidence            44456678899999999999877775 689999         9996 322222  344444 23332 1222333344  


Q ss_pred             cCCCchhhHHHHhHHHhHhhhHhhhhhceeecCcccCCcCCCcHHHHHHHHHHHhhcCCCCCCcce-----------eEe
Q 020892          221 HKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHGVPY-----------GLF  289 (320)
Q Consensus       221 ~~g~~~g~~fg~GLGIT~YGiaYffvHDglVH~Rfp~g~~~~~pYlrri~~AH~lHH~~Ke~Gv~F-----------G~l  289 (320)
                         ..   ...+++.+++-++.+++.|+++.+. .+.+.   .+++-.-.+-|++||+......||           |.+
T Consensus       165 ---~~---~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~---~~~v~~~p~~H~lHH~~~~~~~Nyg~~~~~WDrlFGT~  234 (271)
T COG3000         165 ---LS---PVAVALLFIFLLFWAVLIHSNLDLP-LPLGW---LRYVFNTPRHHRLHHSKDPYDKNYGVTLTFWDRLFGTY  234 (271)
T ss_pred             ---CC---HHHHHHHHHHHHHHHHHHhcCcccc-CCccc---ceeeecCchHHHHhccCCCCCCcchhhhHHHHHHcccC
Confidence               12   2345677788888899999997775 43332   233446677899999743122344           566


Q ss_pred             eecchh
Q 020892          290 LGPKEL  295 (320)
Q Consensus       290 l~P~ey  295 (320)
                      ..|++.
T Consensus       235 ~~~~~~  240 (271)
T COG3000         235 HPPDER  240 (271)
T ss_pred             CCCccc
Confidence            666665

>PLN02869 fatty aldehyde decarbonylase

Probab=97.42  E-value=0.00027  Score=73.78  Aligned_cols=131  Identities=22%  Similarity=0.357  Sum_probs=66.1

Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cchhhhhhhcCCCCCCCCCC-CCCCC-------CcchHHHHhhH
Q 020892          138 VPLAEMFGTFALSVGAAVGMEFWARWAHKALWHAS-LWHMHEKVIFGISLQSHHRP-REGPF-------ELNDVFAIINA  208 (320)
Q Consensus       138 ~p~~eM~~~~~l~vga~v~MEf~A~~aHKylmHG~-lW~~H~~~~f~~~h~sHH~p-~~g~F-------E~NDlFaiifA  208 (320)
                      +|+-+--+.++.++.=+..+|++-||+||.+=|.+ +|++|+         -||+. ...|+       |-.=++.++++
T Consensus       119 ~P~W~~~g~l~~~Llhv~~~Df~fYW~HRllH~~~LYwr~Hk---------vHHss~~~~P~Ts~~HP~~E~L~y~ll~~  189 (620)
T PLN02869        119 MPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYHS---------HHHSSIVTEPITSVIHPFAEHIAYFLLFA  189 (620)
T ss_pred             CcccccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHh---------hccCCCCCCchhhhcCcHHHHHHHHHHHH
Confidence            34433323333333334458999999999765554 579999         89973 33333       21123345566


Q ss_pred             HHHHHHHHhhhccCCCchhhHHHHhHHHhHhhhHhhhhhceeecC--c-ccCCcC---CCcHHHHHHHHHHHhhcCCCCC
Q 020892          209 VPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHK--R-FPVGPI---ADVPYFRRVAAAHQLHHSDKFH  282 (320)
Q Consensus       209 vpAIaLi~~G~~~~g~~~g~~fg~GLGIT~YGiaYffvHDglVH~--R-fp~g~~---~~~pYlrri~~AH~lHH~~Ke~  282 (320)
                      +|.+.+++.|..   .   .+   .+.+.+   .|+.+-..+.|-  + +|..+.   +-.+|+-.=...|.+||+. ++
T Consensus       190 IPLllli~~g~~---h---i~---t~~~yl---i~~~f~~~~gHSN~El~P~~~~~~~ppLkyll~TPsfHdlHHs~-fd  256 (620)
T PLN02869        190 IPLLTTIFTGTA---S---IA---AFFGYI---SYIDFMNNMGHCNFELIPKWLFSIFPPLKYLMYTPSYHSLHHTQ-FR  256 (620)
T ss_pred             HHHHHHhhcccc---h---HH---HHHHHH---HHHHHHhcccccCccccccchhccCCcchheecCchHHhHHhcc-CC
Confidence            666655544421   0   11   011111   223332333441  1 121111   1123444446899999985 44


Q ss_pred             CcceeEeee
Q 020892          283 GVPYGLFLG  291 (320)
Q Consensus       283 Gv~FG~ll~  291 (320)
                       .|||+++.
T Consensus       257 -~NYGlfF~  264 (620)
T PLN02869        257 -TNYSLFMP  264 (620)
T ss_pred             -cCcccchH
Confidence             49998754

>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism]

Probab=97.18  E-value=0.00098  Score=62.64  Aligned_cols=132  Identities=26%  Similarity=0.337  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhc-----cc--hhhhhhhcCCCCCCCCC-CCCC-CCCcchHHHHhhHHHHHHHHH
Q 020892          146 TFALSVGAAVGMEFWARWAHKALWHAS-----LW--HMHEKVIFGISLQSHHR-PREG-PFELNDVFAIINAVPAIALLS  216 (320)
Q Consensus       146 ~~~l~vga~v~MEf~A~~aHKylmHG~-----lW--~~H~~~~f~~~h~sHH~-p~~g-~FE~NDlFaiifAvpAIaLi~  216 (320)
                      ...+++.+++.-.+++|-.||+++|=-     -|  .+|.     ..|.-||. |-+| .+-.--+.+.+.+.|--.++.
T Consensus        83 ~~~~f~~Gvf~WTl~EY~lHRflFH~k~~~~s~~~~t~Hf-----l~HGcHHk~P~D~~RLVfPP~~~~il~~pfy~~~~  157 (240)
T KOG0539|consen   83 FSGLFVIGVFTWTLIEYTLHRFLFHIKPNPDSYWLITLHF-----LIHGCHHKLPMDGYRLVFPPTPFAILAAPFYLILS  157 (240)
T ss_pred             hhHHHHHHHHHHHHHHHHHHheEEEecCCCCchHHHHHHH-----HHhcccccCCCCCceEecCCchHHHHHHHHHHHHH
Confidence            456777788889999999999999953     45  4555     34558886 6554 222223334555555444443


Q ss_pred             hhhccCCCchhhHH-HHhHHHhHhhhHhhhhhceeecCcccCCcCCCcHHHHHHHHHHHhhcCC---CCCCc-------c
Q 020892          217 FGFFHKGLVPGLCF-GAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSD---KFHGV-------P  285 (320)
Q Consensus       217 ~G~~~~g~~~g~~f-g~GLGIT~YGiaYffvHDglVH~Rfp~g~~~~~pYlrri~~AH~lHH~~---Ke~Gv-------~  285 (320)
                      +=+-..  .....| |+=+|+.+|-|.    |=-|.|.+-     ++.+|++.+++-|.=||..   +.-|.       +
T Consensus       158 ~vl~~~--~~~a~faG~l~GYV~YDmt----HYyLHhg~p-----~~~~~~~~lK~yHl~HHfk~q~~GfGItS~lWD~V  226 (240)
T KOG0539|consen  158 LVLPHP--VAPAGFAGGLLGYVCYDMT----HYYLHHGSP-----PKRPYLKHLKKYHLNHHFKHQDLGFGITSSLWDYV  226 (240)
T ss_pred             HhcCcc--hhhhhhccchhhhhhhhhh----hhhhhcCCC-----CCchHHHHHHHHHhhhhhhccccCccccHHHHHHH
Confidence            332111  111112 244788888888    555555333     3569999999999999963   33333       5


Q ss_pred             eeEeeecc
Q 020892          286 YGLFLGPK  293 (320)
Q Consensus       286 FG~ll~P~  293 (320)
                      ||.+..++
T Consensus       227 FgTl~~~~  234 (240)
T KOG0539|consen  227 FGTLGPLK  234 (240)
T ss_pred             hccCCCCc
Confidence            66665554

>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative

Probab=93.80  E-value=0.44  Score=39.95  Aligned_cols=65  Identities=14%  Similarity=0.128  Sum_probs=45.0

Q ss_pred             hhhhchhhhhHHHHHHhhhhhHHHHHHHHHhhhhhhc---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020892           98 RKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQME---GGEVPLAEMFGTFALSVGAAVGMEFWARWAHK  166 (320)
Q Consensus        98 r~~ser~tY~~aa~~ss~g~~~~a~~avy~rf~w~~~---~g~~p~~eM~~~~~l~vga~v~MEf~A~~aHK  166 (320)
                      |+..+|..+.--+.++++|+.-++...+-+-+.+...   +++.    .+...++++|.++|+=.+++|+||
T Consensus        31 ~r~~~~~~~~~l~~~g~IG~~~v~pil~G~~lG~WLD~~~~t~~----~~tl~~lllGv~~G~~n~w~wi~r   98 (100)
T TIGR02230        31 RKNATRSIWEGLGMFGLIGWSVAIPTLLGVAVGIWLDRHYPSPF----SWTLTMLIVGVVIGCLNAWHWVSR   98 (100)
T ss_pred             HhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc----HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3335677777778899999887777666666666664   2333    233446677788888888888887

This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.

>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism]

Probab=93.02  E-value=0.87  Score=44.76  Aligned_cols=68  Identities=24%  Similarity=0.281  Sum_probs=44.7

Q ss_pred             HHHhhhhhHHHHHHHHHhhhhhhcCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cchhhhhhhcCCCCC
Q 020892          111 VMSSFGITSMAVMAVYYRFWWQMEGG--EVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHAS-LWHMHEKVIFGISLQ  187 (320)
Q Consensus       111 ~~ss~g~~~~a~~avy~rf~w~~~~g--~~p~~eM~~~~~l~vga~v~MEf~A~~aHKylmHG~-lW~~H~~~~f~~~h~  187 (320)
                      +|+.+-+.+-++..--|.-.| +.=|  +.||.+.+.++.+++   +.-||.-||+||++=|-. -|++|+         
T Consensus        95 w~sll~~~~~~m~i~gyskl~-d~i~~~~~gw~~~~~~i~~fl---fF~Df~iYw~HR~lH~~~vy~~LH~---------  161 (312)
T KOG0872|consen   95 WMSLLTVPWFLMEIRGYSKLY-DNIGILEYGWFLLFVSIFLFL---FFTDFGIYWAHRELHHRGVYKRLHK---------  161 (312)
T ss_pred             hHHHHhHHHHHHHHhhhHHhh-hccCcccccHHHHHHHHHHHH---HHHHHHHHHHHHHHhhhHHHhhhcc---------
Confidence            344444444333333333333 3335  788888777776654   578999999999998865 589999         


Q ss_pred             CCCC
Q 020892          188 SHHR  191 (320)
Q Consensus       188 sHH~  191 (320)
                      -||.
T Consensus       162 ~HH~  165 (312)
T KOG0872|consen  162 PHHI  165 (312)
T ss_pred             hhhh
Confidence            9995

>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]

Probab=88.05  E-value=2.8  Score=40.97  Aligned_cols=56  Identities=18%  Similarity=0.405  Sum_probs=38.1

Q ss_pred             HHHHHHHHhh-hhhhcCCCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc-hhhh
Q 020892          120 MAVMAVYYRF-WWQMEGGEV--PLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLW-HMHE  178 (320)
Q Consensus       120 ~a~~avy~rf-~w~~~~g~~--p~~eM~~~~~l~vga~v~MEf~A~~aHKylmHG~lW-~~H~  178 (320)
                      ..+.+.|... .|.+..+.-  ++.+|+..+++++   +.-|++=||+||-+=|+++- .+|+
T Consensus        94 p~~~~~y~~~~~~~~~~~~plPt~~~~l~~l~i~~---liEd~~fY~~HRL~H~~~~Yk~iHK  153 (283)
T KOG0873|consen   94 PLTLVSYPFVEWFGLPSGAPLPSWKEMLAQLVVFF---LIEDIGFYWSHRLFHHKWLYKYIHK  153 (283)
T ss_pred             hHHHHhHHHHHHhCCCcCCCCCcHHHHHHHHHHHH---HHHHHHHHHHHHHhcchHHHHHHHh
Confidence            3444555555 344543333  5888888877764   56789999999988777777 6777

>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism]

Probab=87.26  E-value=0.73  Score=44.40  Aligned_cols=30  Identities=20%  Similarity=0.462  Sum_probs=22.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHH-hhhccc-hhhh
Q 020892          149 LSVGAAVGMEFWARWAHKAL-WHASLW-HMHE  178 (320)
Q Consensus       149 l~vga~v~MEf~A~~aHKyl-mHG~lW-~~H~  178 (320)
                      =++.+++...-|.|+.|||+ |-.+|. ++|.
T Consensus       125 q~f~aflviDtWQYF~HRymH~NK~LYk~iHs  156 (287)
T KOG0874|consen  125 QFFAAFLVIDTWQYFLHRYMHMNKFLYKHIHS  156 (287)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence            35678888899999999985 334577 6777

>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised

Probab=86.32  E-value=5.8  Score=35.58  Aligned_cols=58  Identities=17%  Similarity=0.291  Sum_probs=37.9

Q ss_pred             HHHHHHHHhhhhchhhhhHHHHHHhhhhhHHHHHHHHHhhhhhhcC--CCCcHHHH-HHHHHHHHHHHHHHH
Q 020892           90 ARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEG--GEVPLAEM-FGTFALSVGAAVGME  158 (320)
Q Consensus        90 ~~~~~~~~r~~ser~tY~~aa~~ss~g~~~~a~~avy~rf~w~~~~--g~~p~~eM-~~~~~l~vga~v~ME  158 (320)
                      ..|.+|+.|+           ++-++||-..+.++++--|+|-.+.  .|+|-.-. +.++++|..+++|..
T Consensus        55 ~~Vs~RM~rR-----------m~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGis  115 (153)
T PF11947_consen   55 EVVSNRMLRR-----------MAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGIS  115 (153)
T ss_pred             HHHHHHHHHH-----------HHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhhh
Confidence            3677777764           3456677666666666666666653  57776555 677777777777753

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00