Citrus Sinensis ID: 020901

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
MREIDLGAHTIKSHGARVARNHLHDWIILLLLAVIEVVLYVIHPFYRFVGEDMMTDLKYPFKDNTVPIWAVPMYAVLLPIAIFLLCYLRRRDVYDLHHGILGLLYAVLITGVITDAIKNATGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDGRGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLCYLQFFPPPHYDDGWGPYAYFRAREESHSNNMGHSRNSVNALEMEIHSVNQRTEPNGDAFLPVYANSPPSSTLDEMESGRR
ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEcccHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHEccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHEEEcccccccccccEEEEEEEccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccc
mreidlgahtikSHGARVARNHLHDWIILLLLAVIEVVLYVIHPfyrfvgedmmtdlkypfkdntvpiwavpmYAVLLPIAIFLLCYLRRRDVYDLHHGILGLLYAVLITGVITDAiknatgrprpnffwrcfpdgvpnygghwgdvvchgkdsevreghksfpsghtswsfaGLGFLSLYLSGkikafdgrgHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLCylqffppphyddgwgpyayfrareeshsnnmghsrnsVNALEMEIHSvnqrtepngdaflpvyansppsstldemesgrr
mreidlgahtikshgarVARNHLHDWIILLLLAVIEVVLYVIHPFYRFVGEDMMTDLKYPFKDNTVPIWAVPMYAVLLPIAIFLLCYLRRRDVYDLHHGILGLLYAVLITGVITDAIKNATGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDGRGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLCYLQFFPPPHYDDGWGPYAYFRAREESHSNNMGHSRNSVNALEMEIHSVNQRTEPNGDAFLPVYansppsstldemesgrr
MREIDLGAHTIKSHGARVARNHLHDWiillllavievvlyviHPFYRFVGEDMMTDLKYPFKDNTVPIWAVPMYAVLLPIAIFLLCYLRRRDVYDLHHGILGLLYAVLITGVITDAIKNATGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDGRGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLCYLQFFPPPHYDDGWGPYAYFRAREESHSNNMGHSRNSVNALEMEIHSVNQRTEPNGDAFLPVYANSPPSSTLDEMESGRR
*********TIKSHGARVARNHLHDWIILLLLAVIEVVLYVIHPFYRFVGEDMMTDLKYPFKDNTVPIWAVPMYAVLLPIAIFLLCYLRRRDVYDLHHGILGLLYAVLITGVITDAIKNATGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKD***********SGHTSWSFAGLGFLSLYLSGKIKAFDGRGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLCYLQFFPPPHYDDGWGPYAYFR***********************************************************
*************HGARVARNHLHDWIILLLLAVIEVVLYVIHPFYRFVGEDMMTDLKYPFKDNTVPIWAVPMYAVLLPIAIFLLCYLRRRDVYDLHHGILGLLYAVLITGVITDAIKNATGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDGRGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLCYLQFFPPPHYDDGWGP****************************************************************
MREIDLGAHTIKSHGARVARNHLHDWIILLLLAVIEVVLYVIHPFYRFVGEDMMTDLKYPFKDNTVPIWAVPMYAVLLPIAIFLLCYLRRRDVYDLHHGILGLLYAVLITGVITDAIKNATGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDGRGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLCYLQFFPPPHYDDGWGPYAYFRAREESHSNNMGHSRNSVNALEMEIHSVNQRTEPNGDAFLPVYANSP*************
*****LGAHTIKSHGARVARNHLHDWIILLLLAVIEVVLYVIHPFYRFVGEDMMTDLKYPFKDNTVPIWAVPMYAVLLPIAIFLLCYLRRRDVYDLHHGILGLLYAVLITGVITDAIKNATGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDGRGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLCYLQFFPPPHYDDGWGPYAYFRARE********************************************************
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MREIDLGAHTIKSHGARVARNHLHDWIILLLLAVIEVVLYVIHPFYRFVGEDMMTDLKYPFKDNTVPIWAVPMYAVLLPIAIFLLCYLRRRDVYDLHHGILGLLYAVLITGVITDAIKNATGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDGRGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLCYLQFFPPPHYDDGWGPYAYFRAREESHSNNMGHSRNSVNALEMEIHSVNQRTEPNGDAFLPVYANSPPSSTLDEMESGRR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query320 2.2.26 [Sep-21-2011]
Q8LFD1364 Putative lipid phosphate no no 0.978 0.859 0.636 1e-121
Q9ZU49327 Lipid phosphate phosphata no no 0.925 0.905 0.647 1e-116
Q9XI60290 Lipid phosphate phosphata no no 0.887 0.979 0.686 1e-107
Q5VZY2271 Phosphatidate phosphatase yes no 0.706 0.833 0.395 8e-42
Q0VBU9271 Phosphatidate phosphatase yes no 0.775 0.915 0.372 1e-41
Q3UMZ3260 Phosphatidate phosphatase no no 0.671 0.826 0.419 1e-41
Q8NEB5264 Phosphatidate phosphatase no no 0.662 0.803 0.409 6e-41
Q6GQ62226 Phosphatidate phosphatase N/A no 0.593 0.840 0.424 1e-37
Q54PR7271 PA-phosphatase related-fa yes no 0.656 0.774 0.381 2e-37
Q9UUA6279 Probable diacylglycerol p yes no 0.803 0.921 0.338 7e-32
>sp|Q8LFD1|LPP3_ARATH Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1 Back     alignment and function desciption
 Score =  435 bits (1118), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 203/319 (63%), Positives = 249/319 (78%), Gaps = 6/319 (1%)

Query: 1   MREIDLGAHTIKSHGARVARNHLHDWIILLLLAVIEVVLYVIHPFYRFVGEDMMTDLKYP 60
           MRE  LG HT++SHG  VAR H+HDWIIL+LL ++E VL +IHPFYRFVG+DMMTDL YP
Sbjct: 51  MREAQLGGHTLRSHGMTVARTHMHDWIILVLLVILECVLLIIHPFYRFVGKDMMTDLSYP 110

Query: 61  FKDNTVPIWAVPMYAVLLPIAIFLLCYLRRRDVYDLHHGILGLLYAVLITGVITDAIKNA 120
            K NTVPIW+VP+YA+LLP+ IF+  Y RRRDVYDLHH +LGLLY+VL+T V+TDAIKNA
Sbjct: 111 LKSNTVPIWSVPVYAMLLPLVIFIFIYFRRRDVYDLHHAVLGLLYSVLVTAVLTDAIKNA 170

Query: 121 TGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGHKSFPSGHTSWSFAGLGFLSL 180
            GRPRP+FFWRCFPDG   Y    GDV+CHG  S +REGHKSFPSGHTSWSF+GLGFLSL
Sbjct: 171 VGRPRPDFFWRCFPDGKALYDS-LGDVICHGDKSVIREGHKSFPSGHTSWSFSGLGFLSL 229

Query: 181 YLSGKIKAFDGRGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLC 240
           YLSGKI+AFDG+GHVAKLCIV+LPLL A+LVG+SRV DYWHHWQDVFAGG++GL ++T+C
Sbjct: 230 YLSGKIQAFDGKGHVAKLCIVILPLLFAALVGISRVDDYWHHWQDVFAGGLLGLAISTIC 289

Query: 241 YLQFFPPPHYDDGWGPYAYFRAREESHSNNMGHSRNSVNALEMEIHSVNQRTEPNGDAFL 300
           YLQFFPPP++ +GWGPYAYF+  E +      +      A++     VN   E +G    
Sbjct: 290 YLQFFPPPYHTEGWGPYAYFQVLEAARVQGAAN-----GAVQQPPPQVNNGEEEDGGFMG 344

Query: 301 PVYANSPPSSTLDEMESGR 319
               ++P     +++E+GR
Sbjct: 345 LHLVDNPTMRREEDVETGR 363

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: -
>sp|Q9ZU49|LPP1_ARATH Lipid phosphate phosphatase 1 OS=Arabidopsis thaliana GN=LPP1 PE=2 SV=2 Back     alignment and function description
>sp|Q9XI60|LPP2_ARATH Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana GN=LPP2 PE=2 SV=1 Back     alignment and function description
>sp|Q5VZY2|PPC1A_HUMAN Phosphatidate phosphatase PPAPDC1A OS=Homo sapiens GN=PPAPDC1A PE=1 SV=2 Back     alignment and function description
>sp|Q0VBU9|PPC1A_MOUSE Phosphatidate phosphatase PPAPDC1A OS=Mus musculus GN=Ppapdc1a PE=2 SV=1 Back     alignment and function description
>sp|Q3UMZ3|PPC1B_MOUSE Phosphatidate phosphatase PPAPDC1B OS=Mus musculus GN=Ppapdc1b PE=2 SV=1 Back     alignment and function description
>sp|Q8NEB5|PPC1B_HUMAN Phosphatidate phosphatase PPAPDC1B OS=Homo sapiens GN=PPAPDC1B PE=1 SV=2 Back     alignment and function description
>sp|Q6GQ62|PPC1B_XENLA Phosphatidate phosphatase PPAPDC1B OS=Xenopus laevis GN=ppapdc1b PE=2 SV=1 Back     alignment and function description
>sp|Q54PR7|Y4367_DICDI PA-phosphatase related-family protein DDB_G0284367 OS=Dictyostelium discoideum GN=DDB_G0284367 PE=3 SV=1 Back     alignment and function description
>sp|Q9UUA6|DPP1_SCHPO Probable diacylglycerol pyrophosphate phosphatase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dpp1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query320
224111602332 predicted protein [Populus trichocarpa] 0.962 0.927 0.709 1e-127
359472919343 PREDICTED: putative lipid phosphate phos 0.993 0.927 0.679 1e-126
359472921342 PREDICTED: putative lipid phosphate phos 0.993 0.929 0.679 1e-126
297737764361 unnamed protein product [Vitis vinifera] 0.990 0.878 0.678 1e-125
357508201 478 Lipid phosphate phosphatase [Medicago tr 0.984 0.658 0.656 1e-124
255574320319 phosphatidic acid phosphatase, putative 0.990 0.993 0.655 1e-124
388513345372 unknown [Medicago truncatula] 0.984 0.846 0.656 1e-124
297737766353 unnamed protein product [Vitis vinifera] 0.993 0.900 0.700 1e-124
225424091342 PREDICTED: putative lipid phosphate phos 0.993 0.929 0.700 1e-123
356534342337 PREDICTED: lipid phosphate phosphatase 1 0.981 0.931 0.702 1e-122
>gi|224111602|ref|XP_002315917.1| predicted protein [Populus trichocarpa] gi|222864957|gb|EEF02088.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/320 (70%), Positives = 269/320 (84%), Gaps = 12/320 (3%)

Query: 1   MREIDLGAHTIKSHGARVARNHLHDWIILLLLAVIEVVLYVIHPFYRFVGEDMMTDLKYP 60
           +R+  +G HTIKSHGA++AR+H+HDW+ILLLL VIEV+LYVIHPFYRFVG+DMMTDLKYP
Sbjct: 23  VRQAGMGTHTIKSHGAKLARDHMHDWLILLLLVVIEVILYVIHPFYRFVGKDMMTDLKYP 82

Query: 61  FKDNTVPIWAVPMYAVLLPIAIFLLCYLRRRDVYDLHHGILGLLYAVLITGVITDAIKNA 120
            K+NTVP+W VP+YAVLLP+A+FLL Y+RR+DVYDLHH ILGLL++VLIT VITDAIKNA
Sbjct: 83  LKENTVPVWTVPLYAVLLPVAVFLLVYIRRKDVYDLHHSILGLLFSVLITAVITDAIKNA 142

Query: 121 TGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGHKSFPSGHTSWSFAGLGFLSL 180
            GRPRP+FFWRCFPDG   Y   WG+V+CHGK S+V+EGHKSFPSGHTSWSFAGLGFLSL
Sbjct: 143 VGRPRPDFFWRCFPDGKDLY-DRWGNVICHGKGSDVKEGHKSFPSGHTSWSFAGLGFLSL 201

Query: 181 YLSGKIKAFDGRGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLC 240
           YLSGKIKAFD +GHVAKLCIV LPLL ASLV +SR+ DYWHHWQDVFAGG++GLVVAT C
Sbjct: 202 YLSGKIKAFDRKGHVAKLCIVFLPLLAASLVAISRIDDYWHHWQDVFAGGLLGLVVATFC 261

Query: 241 YLQFFPPPHYDDGWGPYAYFRAREESHSN-NMGHSRNSVNALEMEIHSVNQRTEPNGDAF 299
           Y QFFPPP+ D+GWGPYAYF+A EES SN N G S N+++   +  H V+Q+   NGD F
Sbjct: 262 YAQFFPPPYTDEGWGPYAYFQALEESRSNTNAGQSMNALDLQPVNAHVVSQQGRQNGDDF 321

Query: 300 LPVYANSPPSSTLDEMESGR 319
                     ++L+E+ESGR
Sbjct: 322 ----------ASLEELESGR 331

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359472919|ref|XP_002282839.2| PREDICTED: putative lipid phosphate phosphatase 3, chloroplastic-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359472921|ref|XP_003631216.1| PREDICTED: putative lipid phosphate phosphatase 3, chloroplastic-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297737764|emb|CBI26965.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357508201|ref|XP_003624389.1| Lipid phosphate phosphatase [Medicago truncatula] gi|355499404|gb|AES80607.1| Lipid phosphate phosphatase [Medicago truncatula] Back     alignment and taxonomy information
>gi|255574320|ref|XP_002528074.1| phosphatidic acid phosphatase, putative [Ricinus communis] gi|223532535|gb|EEF34324.1| phosphatidic acid phosphatase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|388513345|gb|AFK44734.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|297737766|emb|CBI26967.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225424091|ref|XP_002282847.1| PREDICTED: putative lipid phosphate phosphatase 3, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356534342|ref|XP_003535715.1| PREDICTED: lipid phosphate phosphatase 1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query320
TAIR|locus:2076919364 LPP3 "lipid phosphate phosphat 0.975 0.857 0.609 1.8e-110
TAIR|locus:2038826327 PAP1 "phosphatidic acid phosph 0.934 0.914 0.633 1.4e-105
TAIR|locus:2037758290 LPP2 "lipid phosphate phosphat 0.887 0.979 0.644 5.4e-102
TAIR|locus:2089643308 LPP4 "lipid phosphate phosphat 0.828 0.860 0.581 5.9e-89
UNIPROTKB|F1Q0R6262 PPAPDC1B "Uncharacterized prot 0.621 0.759 0.451 3.2e-42
MGI|MGI:1919160260 Ppapdc1b "phosphatidic acid ph 0.621 0.765 0.437 1.4e-41
UNIPROTKB|Q8NEB5264 PPAPDC1B "Phosphatidate phosph 0.621 0.753 0.432 2.8e-41
ZFIN|ZDB-GENE-040704-54358 ppapdc1b "phosphatidic acid ph 0.659 0.589 0.427 3.6e-41
UNIPROTKB|F1NVA8253 PPAPDC1A "Uncharacterized prot 0.621 0.786 0.427 4.6e-41
RGD|1591734260 Ppapdc1b "phosphatidic acid ph 0.621 0.765 0.432 1.6e-40
TAIR|locus:2076919 LPP3 "lipid phosphate phosphatase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1091 (389.1 bits), Expect = 1.8e-110, P = 1.8e-110
 Identities = 195/320 (60%), Positives = 240/320 (75%)

Query:     1 MREIDLGAHTIKSHGARVARNHLHDWXXXXXXXXXXXXXXXXHPFYRFVGEDMMTDLKYP 60
             MRE  LG HT++SHG  VAR H+HDW                HPFYRFVG+DMMTDL YP
Sbjct:    51 MREAQLGGHTLRSHGMTVARTHMHDWIILVLLVILECVLLIIHPFYRFVGKDMMTDLSYP 110

Query:    61 FKDNTVPIWAVPMYAVLLPIAIFLLCYLRRRDVYDLHHGILGLLYAVLITGVITDAIKNA 120
              K NTVPIW+VP+YA+LLP+ IF+  Y RRRDVYDLHH +LGLLY+VL+T V+TDAIKNA
Sbjct:   111 LKSNTVPIWSVPVYAMLLPLVIFIFIYFRRRDVYDLHHAVLGLLYSVLVTAVLTDAIKNA 170

Query:   121 TGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGHKSFPSGHTSWSFAGLGFLSL 180
              GRPRP+FFWRCFPDG   Y    GDV+CHG  S +REGHKSFPSGHTSWSF+GLGFLSL
Sbjct:   171 VGRPRPDFFWRCFPDGKALYDS-LGDVICHGDKSVIREGHKSFPSGHTSWSFSGLGFLSL 229

Query:   181 YLSGKIKAFDGRGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLC 240
             YLSGKI+AFDG+GHVAKLCIV+LPLL A+LVG+SRV DYWHHWQDVFAGG++GL ++T+C
Sbjct:   230 YLSGKIQAFDGKGHVAKLCIVILPLLFAALVGISRVDDYWHHWQDVFAGGLLGLAISTIC 289

Query:   241 YLQFFPPPHYDDGWGPYAYFRAREESHSNNMGHSRNSVNALEMEIHSVNQRTEPNGDAFL 300
             YLQFFPPP++ +GWGPYAYF+  E +      +      A++     VN   E +G  F+
Sbjct:   290 YLQFFPPPYHTEGWGPYAYFQVLEAARVQGAANG-----AVQQPPPQVNNGEEEDG-GFM 343

Query:   301 PVY-ANSPPSSTLDEMESGR 319
              ++  ++P     +++E+GR
Sbjct:   344 GLHLVDNPTMRREEDVETGR 363
GO:0003824 "catalytic activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0008195 "phosphatidate phosphatase activity" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0005887 "integral to plasma membrane" evidence=ISS
GO:0006644 "phospholipid metabolic process" evidence=ISS
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2038826 PAP1 "phosphatidic acid phosphatase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037758 LPP2 "lipid phosphate phosphatase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089643 LPP4 "lipid phosphate phosphatase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q0R6 PPAPDC1B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1919160 Ppapdc1b "phosphatidic acid phosphatase type 2 domain containing 1B" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q8NEB5 PPAPDC1B "Phosphatidate phosphatase PPAPDC1B" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040704-54 ppapdc1b "phosphatidic acid phosphatase type 2 domain containing 1B" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NVA8 PPAPDC1A "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1591734 Ppapdc1b "phosphatidic acid phosphatase type 2 domain containing 1B" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9UUA6DPP1_SCHPO3, ., 1, ., 3, ., 40.33820.80310.9211yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.30.766
3rd Layer1.11.1LOW CONFIDENCE prediction!
3rd Layer3.1.3.4LOW CONFIDENCE prediction!
3rd Layer3.6.1LOW CONFIDENCE prediction!
4th Layer1.11.1.18LOW CONFIDENCE prediction!
4th Layer1.11.1.10LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_X001084
hypothetical protein (332 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query320
PLN02250314 PLN02250, PLN02250, lipid phosphate phosphatase 1e-162
PLN02731333 PLN02731, PLN02731, Putative lipid phosphate phosp 1e-155
PLN02715327 PLN02715, PLN02715, lipid phosphate phosphatase 1e-151
cd03390193 cd03390, PAP2_containing_1_like, PAP2, subfamily s 3e-85
cd03384150 cd03384, PAP2_wunen, PAP2, wunen subfamily 2e-33
cd01610122 cd01610, PAP2_like, PAP2_like proteins, a super-fa 3e-26
pfam01569123 pfam01569, PAP2, PAP2 superfamily 6e-20
smart00014116 smart00014, acidPPc, Acid phosphatase homologues 5e-18
cd03392182 cd03392, PAP2_like_2, PAP2_like_2 proteins 4e-15
cd03394106 cd03394, PAP2_like_5, PAP2_like_5 proteins 4e-14
COG0671232 COG0671, PgpB, Membrane-associated phospholipid ph 6e-12
cd03389186 cd03389, PAP2_lipid_A_1_phosphatase, PAP2_like pro 2e-09
cd03395177 cd03395, PAP2_like_4, PAP2_like_4 proteins 2e-09
cd03382159 cd03382, PAP2_dolichyldiphosphatase, PAP2_like pro 1e-07
cd03391159 cd03391, PAP2_containing_2_like, PAP2, subfamily s 1e-06
cd03396197 cd03396, PAP2_like_6, PAP2_like_6 proteins 6e-05
cd03393125 cd03393, PAP2_like_3, PAP2_like_3 proteins 1e-04
cd03386186 cd03386, PAP2_Aur1_like, PAP2_like proteins, Aur1_ 0.004
>gnl|CDD|215139 PLN02250, PLN02250, lipid phosphate phosphatase Back     alignment and domain information 
 Score =  453 bits (1167), Expect = e-162
 Identities = 208/310 (67%), Positives = 237/310 (76%), Gaps = 15/310 (4%)

Query: 1   MREIDLGAHTIKSHGARVARNHLHDWIILLLLAVIEVVLYVIHPFYRFVGEDMMTDLKYP 60
           M EI LGAHTI+SHG +VAR H+HDW+ILLLL VIEVVL VI PF+RFVG+DM+TDL YP
Sbjct: 1   MPEIQLGAHTIRSHGVKVARTHMHDWLILLLLVVIEVVLNVIEPFHRFVGKDMLTDLSYP 60

Query: 61  FKDNTVPIWAVPMYAVLLPIAIFLLCYLRRRDVYDLHHGILGLLYAVLITGVITDAIKNA 120
            +DNT+P WAVP+ A+LLP A+ L+ Y  RRDVYDLHH ILGLL++VLITGVITDAIK+A
Sbjct: 61  LQDNTIPFWAVPLIAILLPFAVILVYYFIRRDVYDLHHAILGLLFSVLITGVITDAIKDA 120

Query: 121 TGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGHKSFPSGHTSWSFAGLGFLSL 180
            GRPRP+FFWRCFPDG   +     DV+C G  S ++EGHKSFPSGHTSWSFAGLGFLSL
Sbjct: 121 VGRPRPDFFWRCFPDGKGVFHPVTTDVLCTGAKSVIKEGHKSFPSGHTSWSFAGLGFLSL 180

Query: 181 YLSGKIKAFDGRGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLC 240
           YLSGKI+ FD RGHVAKLCIV LPLLVA+LVGVSRV DYWHHWQDVFAG +IGL VA+ C
Sbjct: 181 YLSGKIRVFDRRGHVAKLCIVFLPLLVAALVGVSRVDDYWHHWQDVFAGALIGLTVASFC 240

Query: 241 YLQFFPPPHYDDGWGPYAYFRAREESH-----SNNMGHSRNSVNALE---------MEIH 286
           YLQFFPPP+  DGWGP+AYF+   ES      SN + H       LE         ME  
Sbjct: 241 YLQFFPPPYDIDGWGPHAYFQMLAESRNGAQSSNGINHLSVQQTELESVYIDSQHGMETS 300

Query: 287 SVNQR-TEPN 295
            VN R T P 
Sbjct: 301 RVNTRDTSPI 310

Length = 314
>gnl|CDD|178332 PLN02731, PLN02731, Putative lipid phosphate phosphatase Back     alignment and domain information
>gnl|CDD|178317 PLN02715, PLN02715, lipid phosphate phosphatase Back     alignment and domain information
>gnl|CDD|239484 cd03390, PAP2_containing_1_like, PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1 Back     alignment and domain information
>gnl|CDD|239479 cd03384, PAP2_wunen, PAP2, wunen subfamily Back     alignment and domain information
>gnl|CDD|238813 cd01610, PAP2_like, PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies Back     alignment and domain information
>gnl|CDD|216577 pfam01569, PAP2, PAP2 superfamily Back     alignment and domain information
>gnl|CDD|214471 smart00014, acidPPc, Acid phosphatase homologues Back     alignment and domain information
>gnl|CDD|239486 cd03392, PAP2_like_2, PAP2_like_2 proteins Back     alignment and domain information
>gnl|CDD|239488 cd03394, PAP2_like_5, PAP2_like_5 proteins Back     alignment and domain information
>gnl|CDD|223743 COG0671, PgpB, Membrane-associated phospholipid phosphatase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|239483 cd03389, PAP2_lipid_A_1_phosphatase, PAP2_like proteins, Lipid A 1-phosphatase subfamily Back     alignment and domain information
>gnl|CDD|239489 cd03395, PAP2_like_4, PAP2_like_4 proteins Back     alignment and domain information
>gnl|CDD|239477 cd03382, PAP2_dolichyldiphosphatase, PAP2_like proteins, dolichyldiphosphatase subfamily Back     alignment and domain information
>gnl|CDD|239485 cd03391, PAP2_containing_2_like, PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2 Back     alignment and domain information
>gnl|CDD|239490 cd03396, PAP2_like_6, PAP2_like_6 proteins Back     alignment and domain information
>gnl|CDD|239487 cd03393, PAP2_like_3, PAP2_like_3 proteins Back     alignment and domain information
>gnl|CDD|239481 cd03386, PAP2_Aur1_like, PAP2_like proteins, Aur1_like subfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 320
PLN02731333 Putative lipid phosphate phosphatase 100.0
PLN02250314 lipid phosphate phosphatase 100.0
PLN02715327 lipid phosphate phosphatase 100.0
KOG3030317 consensus Lipid phosphate phosphatase and related 100.0
cd03390193 PAP2_containing_1_like PAP2, subfamily similar to 100.0
cd03384150 PAP2_wunen PAP2, wunen subfamily. Most likely a fa 99.96
cd03396197 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super- 99.9
cd03382159 PAP2_dolichyldiphosphatase PAP2_like proteins, dol 99.88
cd03389186 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lip 99.88
cd03391159 PAP2_containing_2_like PAP2, subfamily similar to 99.88
cd03392182 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super- 99.88
PRK10699244 phosphatidylglycerophosphatase B; Provisional 99.87
cd03385144 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfa 99.87
cd03383109 PAP2_diacylglycerolkinase PAP2_like proteins, diac 99.87
cd03395177 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super- 99.87
cd03388151 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-pho 99.86
cd03394106 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super- 99.85
PRK09597190 lipid A 1-phosphatase; Reviewed 99.84
cd03393125 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super- 99.84
PRK11837202 undecaprenyl pyrophosphate phosphatase; Provisiona 99.84
smart00014116 acidPPc Acid phosphatase homologues. 99.81
cd03381235 PAP2_glucose_6_phosphatase PAP2_like proteins, glu 99.8
PLN02525 352 phosphatidic acid phosphatase family protein 99.79
PF01569129 PAP2: PAP2 superfamily This family includes the fo 99.75
cd01610122 PAP2_like PAP2_like proteins, a super-family of hi 99.73
COG0671232 PgpB Membrane-associated phospholipid phosphatase 99.68
cd03397232 PAP2_acid_phosphatase PAP2, bacterial acid phospha 99.66
cd03380209 PAP2_like_1 PAP2_like_1 proteins, a sub-family of 99.64
KOG4268189 consensus Uncharacterized conserved protein contai 99.62
KOG3146228 consensus Dolichyl pyrophosphate phosphatase and r 99.53
cd03398232 PAP2_haloperoxidase PAP2, haloperoxidase_like subf 99.47
cd03386186 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfa 99.39
COG3907249 PAP2 (acid phosphatase) superfamily protein [Gener 99.28
KOG2822407 consensus Sphingoid base-phosphate phosphatase [Li 99.17
PF14378191 PAP2_3: PAP2 superfamily 98.51
COG1963153 Uncharacterized protein conserved in bacteria [Fun 96.84
PF1436074 PAP2_C: PAP2 superfamily C-terminal 96.71
PF02681141 DUF212: Divergent PAP2 family; InterPro: IPR003832 96.26
KOG3058351 consensus Uncharacterized conserved protein [Funct 86.37
PF05297 381 Herpes_LMP1: Herpesvirus latent membrane protein 1 84.01
PF10261238 Scs3p: Inositol phospholipid synthesis and fat-sto 81.09
>PLN02731 Putative lipid phosphate phosphatase Back     alignment and domain information 
Probab=100.00  E-value=2e-64  Score=470.39  Aligned_cols=312  Identities=64%  Similarity=1.235  Sum_probs=281.9

Q ss_pred             CCCcccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCccCCCCCCCCCCccchhHHHHHHHHHHH
Q 020901            1 MREIDLGAHTIKSHGARVARNHLHDWIILLLLAVIEVVLYVIHPFYRFVGEDMMTDLKYPFKDNTVPIWAVPMYAVLLPI   80 (320)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~dw~~li~l~~~~~~l~~~~p~~rf~~~d~~~~~~~p~~~~~i~~~~~~~~~~~lp~   80 (320)
                      |+++++|.||+++|+.++++.|+.||+++++++++..+++.++||+|++..|++++++||++++++|.+.+.++++++|+
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~Dwii~~~l~~~~~i~~~~~Pf~r~f~~~~~~~isyP~~~etVp~~~l~ii~~liPi   99 (333)
T PLN02731         20 MREAQLGGHTLRSHGMTVARTHMHDWIILVLLVILECVLLIIHPFYRFVGKDMMTDLSYPLKSNTVPIWSVPVYAMLLPL   99 (333)
T ss_pred             hhhcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCcccccccCCCCCCcccHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999988887788999999999999999999999999


Q ss_pred             HHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCCCCCCcccceeecCCCccccCCC
Q 020901           81 AIFLLCYLRRRDVYDLHHGILGLLYAVLITGVITDAIKNATGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGH  160 (320)
Q Consensus        81 ~i~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~i~~~lK~~~grpRP~f~~~c~p~~~~~~~~~~~~~~C~~~~~~~~~~~  160 (320)
                      ++++++++++++.++++..+++++++++++.++++++|..+|||||+|+++|+|++...++. .++.+|++++..+++++
T Consensus       100 ~iii~~~~~~r~~~~l~~~ilgll~s~~~t~liT~ilK~~vGRpRPdfl~rC~P~~~~~~~~-~~~~iCt~~~~~l~dg~  178 (333)
T PLN02731        100 VIFIFIYFRRRDVYDLHHAVLGLLYSVLVTAVLTDAIKNAVGRPRPDFFWRCFPDGKALYDS-LGDVICHGDKSVIREGH  178 (333)
T ss_pred             HheeeeeeehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCchhhcCccccccccc-cccceecCchhcccccC
Confidence            99888888888888888889999999999999999999999999999999999998766554 56779999888889999


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHhhcccccCCCChhHHHHHHHHHHHHHHHHHHHHhhcCCcChhHhhHHHHHHHHHHHHH
Q 020901          161 KSFPSGHTSWSFAGLGFLSLYLSGKIKAFDGRGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLC  240 (320)
Q Consensus       161 ~SFPSGHas~a~a~~~~l~l~l~~~~~~~~~~~~~~r~~l~~~~l~~a~lV~~SRv~~g~H~~sDVlaG~~iG~~va~~~  240 (320)
                      +|||||||+++|++++++++|+.++++.++++++.+|.++.+++++++++||+||++||+|||+||++|+++|+++++++
T Consensus       179 ~SFPSGHSS~sfagl~fLslyL~~kl~~~~~~~~~~rl~l~~lpll~A~lIalSRV~Dy~Hh~sDVlaG~lLG~~iA~~~  258 (333)
T PLN02731        179 KSFPSGHTSWSFSGLGFLSLYLSGKIQAFDGKGHVAKLCIVILPLLFAALVGISRVDDYWHHWQDVFAGGLLGLAISTIC  258 (333)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999888878888999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCCCCCcchhhhhhhcccCC-CCCCCcccccccccccccccCCCCCCC-CccccccCCCCCCCchhHhhhc
Q 020901          241 YLQFFPPPHYDDGWGPYAYFRAREESHSN-NMGHSRNSVNALEMEIHSVNQRTEPNG-DAFLPVYANSPPSSTLDEMESG  318 (320)
Q Consensus       241 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  318 (320)
                      |+++||++++.++|+|+++|++++|.+.+ ++.+..+..     +++.++.+.++|| .|+++  .|.+...+.||.|+|
T Consensus       259 Y~~yfp~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  331 (333)
T PLN02731        259 YLQFFPPPYHTEGWGPYAYFQVLEAARVQGAANGAVQQP-----PPQVNNGEEEDGGFMGLHL--VDNPTMRREEDVETG  331 (333)
T ss_pred             HHHHcCCccccCCCCChHHHHHhhccccCCcCcccccCC-----CcccccccccCCceeEeee--cCCCcccchhhhhcc
Confidence            99999999999999999999999999876 333333333     3444555555577 89998  566688999999999


Q ss_pred             CC
Q 020901          319 RR  320 (320)
Q Consensus       319 ~~  320 (320)
                      ||
T Consensus       332 ~~  333 (333)
T PLN02731        332 RG  333 (333)
T ss_pred             CC
Confidence            97

>PLN02250 lipid phosphate phosphatase Back     alignment and domain information
>PLN02715 lipid phosphate phosphatase Back     alignment and domain information
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism] Back     alignment and domain information
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1 Back     alignment and domain information
>cd03384 PAP2_wunen PAP2, wunen subfamily Back     alignment and domain information
>cd03396 PAP2_like_6 PAP2_like_6 proteins Back     alignment and domain information
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily Back     alignment and domain information
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily Back     alignment and domain information
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2 Back     alignment and domain information
>cd03392 PAP2_like_2 PAP2_like_2 proteins Back     alignment and domain information
>PRK10699 phosphatidylglycerophosphatase B; Provisional Back     alignment and domain information
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily Back     alignment and domain information
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family Back     alignment and domain information
>cd03395 PAP2_like_4 PAP2_like_4 proteins Back     alignment and domain information
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily Back     alignment and domain information
>cd03394 PAP2_like_5 PAP2_like_5 proteins Back     alignment and domain information
>PRK09597 lipid A 1-phosphatase; Reviewed Back     alignment and domain information
>cd03393 PAP2_like_3 PAP2_like_3 proteins Back     alignment and domain information
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional Back     alignment and domain information
>smart00014 acidPPc Acid phosphatase homologues Back     alignment and domain information
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily Back     alignment and domain information
>PLN02525 phosphatidic acid phosphatase family protein Back     alignment and domain information
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3 Back     alignment and domain information
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies Back     alignment and domain information
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism] Back     alignment and domain information
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases Back     alignment and domain information
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases Back     alignment and domain information
>KOG4268 consensus Uncharacterized conserved protein containing PAP2 domain [Function unknown] Back     alignment and domain information
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism] Back     alignment and domain information
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily Back     alignment and domain information
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily Back     alignment and domain information
>COG3907 PAP2 (acid phosphatase) superfamily protein [General function prediction only] Back     alignment and domain information
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism] Back     alignment and domain information
>PF14378 PAP2_3: PAP2 superfamily Back     alignment and domain information
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF14360 PAP2_C: PAP2 superfamily C-terminal Back     alignment and domain information
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised Back     alignment and domain information
>KOG3058 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) Back     alignment and domain information
>PF10261 Scs3p: Inositol phospholipid synthesis and fat-storage-inducing TM; InterPro: IPR019388 This entry represents the fat storage-inducing transmembrane (FIT) family of proteins, which play an important role in lipid droplet accumulation Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query320
1d2t_A231 Acid phosphatase; all alpha, hydrolase; 1.90A {Esc 2e-09
2ipb_A230 PHON protein, class A nonspecific acid phosphatase 3e-08
>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A Length = 231 Back     alignment and structure
 Score = 56.2 bits (135), Expect = 2e-09
 Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 29/133 (21%)

Query: 105 YAVLITGVITDAIKNATGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGHKSFP 164
                  + T + K+   R RP  F+              G   C+  + +    + S+P
Sbjct: 102 MIEDAGDLATRSAKDHYMRIRPFAFY--------------GVSTCNTTEQDKLSKNGSYP 147

Query: 165 SGHTSWSFAGLGFLSLYLSGKIKAFDGRGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQ 224
           SGHTS  +A     +L L+             +    +L       +G SRV   +H   
Sbjct: 148 SGHTSIGWA----TALVLAEI---------NPQRQNEILKR--GYELGQSRVICGYHWQS 192

Query: 225 DVFAGGMIGLVVA 237
           DV A  ++G  V 
Sbjct: 193 DVDAARVVGSAVV 205
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A Length = 230 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query320
2ipb_A230 PHON protein, class A nonspecific acid phosphatase 99.79
1d2t_A231 Acid phosphatase; all alpha, hydrolase; 1.90A {Esc 99.77
1qi9_A556 Protein (vanadium bromoperoxidase); haloperoxidase 99.46
1up8_A598 Vanadium-dependent bromoperoxidase 1; haloperoxida 99.21
3bb0_A609 Vanadium chloroperoxidase; protein phosphate-inter 99.13
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A Back     alignment and structure
Probab=99.79  E-value=1.2e-19  Score=162.46  Aligned_cols=101  Identities=27%  Similarity=0.214  Sum_probs=74.9

Q ss_pred             HHHHHHHHhhCCCCCCcccccCCCCCCCCCCcccceeecCCCccccCCCCCCCChhHHHHHHHHHHHHHHHhhcccccCC
Q 020901          112 VITDAIKNATGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDG  191 (320)
Q Consensus       112 ~i~~~lK~~~grpRP~f~~~c~p~~~~~~~~~~~~~~C~~~~~~~~~~~~SFPSGHas~a~a~~~~l~l~l~~~~~~~~~  191 (320)
                      +++.++|..++||||+....              ...|........+.++||||||++.++++++++++++..+      
T Consensus        97 ~~~~~lK~~~~r~RP~~~~~--------------~~~~~~~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~------  156 (230)
T 2ipb_A           97 YATASAKKYYMRTRPFVLFN--------------HSTCRPEDENTLRKDGSYPSGHDAYSTLLALVLSQARPER------  156 (230)
T ss_dssp             TTTHHHHHHHCCCCHHHHTT--------------CCCSCGGGHHHHHTSCCSSCHHHHHHHHHHHHHHHHCGGG------
T ss_pred             HHHHHHHHHhCCCCcCccCC--------------CCeeccCcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHH------
Confidence            78899999999999985421              1123211111236789999999999999888777654321      


Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhhcCCcChhHhhHHHHHHHHHHHHHH
Q 020901          192 RGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLCY  241 (320)
Q Consensus       192 ~~~~~r~~l~~~~l~~a~lV~~SRv~~g~H~~sDVlaG~~iG~~va~~~~  241 (320)
                          ..     ..+.++.+||+||||+|+||++||++|+++|..++..++
T Consensus       157 ----~~-----~~~~~a~~v~~SRv~~G~H~~sDVlaG~~lG~~~~~~~~  197 (230)
T 2ipb_A          157 ----AQ-----ELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQ  197 (230)
T ss_dssp             ----HH-----HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHT
T ss_pred             ----HH-----HHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHH
Confidence                11     124568899999999999999999999999999987653
>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A Back     alignment and structure
>1qi9_A Protein (vanadium bromoperoxidase); haloperoxidase, oxidoreductase; 2.05A {Ascophyllum nodosum} SCOP: a.111.1.2 Back     alignment and structure
>1up8_A Vanadium-dependent bromoperoxidase 1; haloperoxidase, vanadate; 2.20A {Corallina pilulifera} SCOP: a.111.1.2 PDB: 1qhb_A Back     alignment and structure
>3bb0_A Vanadium chloroperoxidase; protein phosphate-intermediate complex, phospatase activity, chloride, metal-binding, oxidoreductase, secreted; 1.50A {Curvularia inaequalis} PDB: 1vns_A 1vnc_A 1vni_A 1idq_A 1vne_A 1vnf_A 1idu_A 1vng_A 1vnh_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 320
d1d2ta_224 a.111.1.1 (A:) Bacterial acid phosphatase {Escheri 3e-10
>d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia blattae [TaxId: 563]} Length = 224 Back     information, alignment and structure

class: All alpha proteins
fold: Acid phosphatase/Vanadium-dependent haloperoxidase
superfamily: Acid phosphatase/Vanadium-dependent haloperoxidase
family: Type 2 phosphatidic acid phosphatase, PAP2
domain: Bacterial acid phosphatase
species: Escherichia blattae [TaxId: 563]

 Score = 57.0 bits (137), Expect = 3e-10
 Identities = 28/127 (22%), Positives = 44/127 (34%), Gaps = 29/127 (22%)

Query: 111 GVITDAIKNATGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGHKSFPSGHTSW 170
            + T + K+   R RP  F+              G   C+  + +    + S+PSGHTS 
Sbjct: 102 DLATRSAKDHYMRIRPFAFY--------------GVSTCNTTEQDKLSKNGSYPSGHTSI 147

Query: 171 SFAGLGFLSLYLSGKIKAFDGRGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGG 230
            +A    L+     +                   L     +G SRV   +H   DV A  
Sbjct: 148 GWATALVLAEINPQRQNEI---------------LKRGYELGQSRVICGYHWQSDVDAAR 192

Query: 231 MIGLVVA 237
           ++G  V 
Sbjct: 193 VVGSAVV 199

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query320
d1d2ta_224 Bacterial acid phosphatase {Escherichia blattae [T 99.67
d1vnsa_574 Chloroperoxidase {Curvularia inaequalis [TaxId: 38 96.95
d1qhba_595 Haloperoxidase (bromoperoxidase) {Red algae (Coral 93.39
d1qi9a_555 Haloperoxidase (bromoperoxidase) {Ascophyllum nodo 93.1
>d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia blattae [TaxId: 563]} Back     information, alignment and structure
class: All alpha proteins
fold: Acid phosphatase/Vanadium-dependent haloperoxidase
superfamily: Acid phosphatase/Vanadium-dependent haloperoxidase
family: Type 2 phosphatidic acid phosphatase, PAP2
domain: Bacterial acid phosphatase
species: Escherichia blattae [TaxId: 563]

Probab=99.67  E-value=3.7e-17  Score=143.42  Aligned_cols=100  Identities=28%  Similarity=0.307  Sum_probs=71.4

Q ss_pred             HHHHHHHHhhCCCCCCcccccCCCCCCCCCCcccceeecCCCccccCCCCCCCChhHHHHHHHHHHHHHHHhhcccccCC
Q 020901          112 VITDAIKNATGRPRPNFFWRCFPDGVPNYGGHWGDVVCHGKDSEVREGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDG  191 (320)
Q Consensus       112 ~i~~~lK~~~grpRP~f~~~c~p~~~~~~~~~~~~~~C~~~~~~~~~~~~SFPSGHas~a~a~~~~l~l~l~~~~~~~~~  191 (320)
                      +.+...|..++||||+...              ....|............||||||++.+++.+.+++..+..+.     
T Consensus       103 ~a~~~~K~~~~R~RP~~~~--------------~~~~~~~~~~~~~~~~~SfPSGHa~~a~~~a~~la~~~p~~~-----  163 (224)
T d1d2ta_         103 LATRSAKDHYMRIRPFAFY--------------GVSTCNTTEQDKLSKNGSYPSGHTSIGWATALVLAEINPQRQ-----  163 (224)
T ss_dssp             TTTHHHHHHHCCCCHHHHH--------------TCCCSCC--CCCCCSSCCSSCHHHHHHHHHHHHHHHHCGGGH-----
T ss_pred             HHHHHHHHHHcCCChhhhc--------------CcCCCCccccccCCCCCCcCchhHHHHHHHHHHHHHHhHHHH-----
Confidence            4567899999999996431              112232222223356789999999999988887776543221     


Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhhcCCcChhHhhHHHHHHHHHHHHH
Q 020901          192 RGHVAKLCIVLLPLLVASLVGVSRVSDYWHHWQDVFAGGMIGLVVATLC  240 (320)
Q Consensus       192 ~~~~~r~~l~~~~l~~a~lV~~SRv~~g~H~~sDVlaG~~iG~~va~~~  240 (320)
                           .     ..+.++..+|+|||+.|+||++||++|.++|..++...
T Consensus       164 -----~-----~~~~~a~~~~~SRv~~g~H~~sDv~aG~~lG~ai~a~l  202 (224)
T d1d2ta_         164 -----N-----EILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATL  202 (224)
T ss_dssp             -----H-----HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHH
T ss_pred             -----H-----HHHHHHHHhhhHHHHcccccHHHHHHHHHHHHHHHHHH
Confidence                 1     22456789999999999999999999999998766543
>d1vnsa_ a.111.1.3 (A:) Chloroperoxidase {Curvularia inaequalis [TaxId: 38902]} Back     information, alignment and structure
>d1qhba_ a.111.1.2 (A:) Haloperoxidase (bromoperoxidase) {Red algae (Corallina officinalis) [TaxId: 35170]} Back     information, alignment and structure
>d1qi9a_ a.111.1.2 (A:) Haloperoxidase (bromoperoxidase) {Ascophyllum nodosum [TaxId: 52969]} Back     information, alignment and structure