Citrus Sinensis ID: 020902

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Protein Sequence
MGISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDSPSSDSPVFTNQNTNQNSSC
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccHHHHHHHccEEEEEEEcccccccccHHHHHHHHcccccEEEEEEEEEEEEEEEEEEccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHEEEcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEEccEEEEEEcccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mgissdnvHGFVLAVSSSifigssfiikkkglkkagttgtragsggysylyepwwwAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVsivlhaphertIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKfvpthgnshLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDtfntavisPVYYVMFTTLTIVASIIMFkdwdsqntSQIVTELCGFVTILSGTfllhktkdmgdspssdspvftnqntnqnssc
Flexible Loop (DISEMBL)
MGISSDNVHGFVLAVSSSIFIGSsfiikkkglkkagttgtragsggySYLYEPWWWAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDSpssdspvftnqntnqnssc
Low Complexity Region (SEG)
MGISSDNVHGFVLAVsssifigssfiikkkglkkagttgtragsggysyLYEPWWWAGMITMIVGEIanfaayafapaILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPgflvyggivlvvvgvlifkfvPTHGNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDSPSSDSPVFTNQNTNQNSSC
Disordered region (IsUnstruct)
*******VHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLH***************************
Disordered Region (DISOPRED)
****SDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAG*******SGGYSYLYEPWWWAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFL*****************************
Disordered Region (DISEMBL)
MGISSDNVHGFVLAVSSSIFIGSSFIIKKK*********TRAGSGGYSYLYEPWWWAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTK************************
Disordered Region (DISPRO)
****SDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDM**********************
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDSPSSDSPVFTNQNTNQNSSC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	320	2.2.26 [Sep-21-2011]
Q3SWX0	360	Magnesium transporter NIP	yes	no	0.968	0.861	0.479	1e-78
Q5R7Q3	360	Magnesium transporter NIP	yes	no	0.968	0.861	0.466	2e-77
Q8N8Q9	360	Magnesium transporter NIP	yes	no	0.968	0.861	0.466	2e-77
Q9JJC8	359	Magnesium transporter NIP	yes	no	0.968	0.863	0.453	5e-75
Q8BZF2	406	Magnesium transporter NIP	no	no	0.903	0.711	0.444	1e-69
Q0D2K0	466	Magnesium transporter NIP	no	no	0.921	0.633	0.456	5e-69
Q8BMW7	416	Magnesium transporter NIP	no	no	0.965	0.742	0.464	1e-65
Q5RDB8	410	Magnesium transporter NIP	no	no	0.9	0.702	0.491	5e-57
Q6NVV3	410	Magnesium transporter NIP	no	no	0.9	0.702	0.484	4e-56
Q7RTP0	329	Magnesium transporter NIP	no	no	0.878	0.854	0.396	7e-52

>sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1

 Score =  293 bits (750), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 149/311 (47%), Positives = 206/311 (66%), Gaps = 1/311 (0%)

Query: 10  GFVLAVSSSIFIGSSFIIKKKGLKKAGTTG-TRAGSGGYSYLYEPWWWAGMITMIVGEIA 68
           G  LA+SSSIFIG SFI+KKKGL +    G TRAG GG++YL E  WWAG+++M  GE+A
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSTRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 69  NFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPH 128
           NFAAYAFAPA LVTPLGALS++ SA+L+ + L E+L++ G +GC L ++GS  +V+HAP 
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 129 ERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSIT 188
           E  I ++ E+ H    PGF+V+  +V++V  +LIF   P HG ++++VY+ ICS +G+++
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVSLILIFVVGPRHGQTNILVYITICSVIGAVS 192

Query: 189 VMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVY 248
           V   K LGIA+K  F+G     +  TWI  + +I     QINYLN+ALD FNT++++P+Y
Sbjct: 193 VSCAKGLGIAIKELFAGKPVLQHPLTWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIY 252

Query: 249 YVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDSPSSDSPV 308
           YV FTT  I  S I+FK+W       ++  L GF TI+ G FLLH  KD+  S SS    
Sbjct: 253 YVFFTTSVITCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLSSLPVS 312

Query: 309 FTNQNTNQNSS 319
           F       N S
Sbjct: 313 FRKDEKAVNGS 323

Acts as a selective Mg(2+) transporter.
Bos taurus (taxid: 9913)

>sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1

 Score =  289 bits (739), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 205/311 (65%), Gaps = 1/311 (0%)

Query: 10  GFVLAVSSSIFIGSSFIIKKKGLKKAGTTGT-RAGSGGYSYLYEPWWWAGMITMIVGEIA 68
           G  LA+SSSIFIG SFI+KKKGL +    G+ RAG GG++YL E  WWAG+++M  GE+A
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 69  NFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPH 128
           NFAAYAFAPA LVTPLGALS++ SA+L+ + L E+L++ G +GC L ++GS  +V+HAP 
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 129 ERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSIT 188
           E  I ++ E+ H    PGF+V+  +V++V  +LIF   P HG ++++VY+ ICS +G+ +
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFS 192

Query: 189 VMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVY 248
           V  VK LGIA+K  F+G     +   WI  + +I     QINYLN+ALD FNT++++P+Y
Sbjct: 193 VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIY 252

Query: 249 YVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDSPSSDSPV 308
           YV FTT  +  S I+FK+W       ++  L GF TI+ G FLLH  KD+  S +S    
Sbjct: 253 YVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVS 312

Query: 309 FTNQNTNQNSS 319
           F       N +
Sbjct: 313 FRKDEKAMNGN 323

Acts as a selective Mg(2+) transporter.

Pongo abelii (taxid: 9601)

>sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1

 Score =  289 bits (739), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 205/311 (65%), Gaps = 1/311 (0%)

Query: 10  GFVLAVSSSIFIGSSFIIKKKGLKKAGTTGT-RAGSGGYSYLYEPWWWAGMITMIVGEIA 68
           G  LA+SSSIFIG SFI+KKKGL +    G+ RAG GG++YL E  WWAG+++M  GE+A
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 69  NFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPH 128
           NFAAYAFAPA LVTPLGALS++ SA+L+ + L E+L++ G +GC L ++GS  +V+HAP 
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 129 ERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSIT 188
           E  I ++ E+ H    PGF+V+  +V++V  +LIF   P HG ++++VY+ ICS +G+ +
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFS 192

Query: 189 VMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVY 248
           V  VK LGIA+K  F+G     +   WI  + +I     QINYLN+ALD FNT++++P+Y
Sbjct: 193 VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIY 252

Query: 249 YVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDSPSSDSPV 308
           YV FTT  +  S I+FK+W       ++  L GF TI+ G FLLH  KD+  S +S    
Sbjct: 253 YVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVS 312

Query: 309 FTNQNTNQNSS 319
           F       N +
Sbjct: 313 FRKDEKAMNGN 323

Acts as a selective Mg(2+) transporter.

Homo sapiens (taxid: 9606)

>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1

 Score =  281 bits (719), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 201/311 (64%), Gaps = 1/311 (0%)

Query: 10  GFVLAVSSSIFIGSSFIIKKKGLKKAGTTGT-RAGSGGYSYLYEPWWWAGMITMIVGEIA 68
           G  LA++SSIFIG SFI+KKKGL +    G+ RAG GG++YL E  WWAG+++M  GE+A
Sbjct: 13  GLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 69  NFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPH 128
           NFAAYAFAPA LVTPLGALS++ SA+L+ + L E+L++ G +GC L ++GS  +V+HAP 
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 129 ERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSIT 188
           E  I ++ E+ H    PGF+V+   V++V  + IF   P HG ++++VY+ ICS +G+ +
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFS 192

Query: 189 VMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVY 248
           V  VK LGIA+K   +G     +   WI    ++     QINYLN+ALD FNT++++P+Y
Sbjct: 193 VSCVKGLGIAIKELLAGKPVLQHPLAWILLFSLVVCVSTQINYLNRALDIFNTSIVTPIY 252

Query: 249 YVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDSPSSDSPV 308
           YV FTT  +  S I+FK+W       ++  L GF TI+ G FLLH  KD+  S +S    
Sbjct: 253 YVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVS 312

Query: 309 FTNQNTNQNSS 319
           F       N +
Sbjct: 313 FRKDEKAMNGN 323

Acts as a selective Mg(2+) transporter.

Mus musculus (taxid: 10090)

>sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1

 Score =  263 bits (672), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 129/290 (44%), Positives = 195/290 (67%), Gaps = 1/290 (0%)

Query: 10  GFVLAVSSSIFIGSSFIIKKKGLKKAGTTG-TRAGSGGYSYLYEPWWWAGMITMIVGEIA 68
           G  LA  S   IG+S I+KKKGL +   TG TRA +GGY YL +P WWAGM TM  GE+A
Sbjct: 61  GVGLAFLSCFLIGTSVILKKKGLIRLVATGATRAVNGGYGYLKDPMWWAGMATMSAGEVA 120

Query: 69  NFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPH 128
           NF AYAFAPA +VTPLGALS++ SA+ + + L E L++ G LGC +C+ GS  +V+HAP 
Sbjct: 121 NFGAYAFAPATVVTPLGALSVLISAIFSSYCLGESLNLLGKLGCVICMAGSTVMVIHAPK 180

Query: 129 ERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSIT 188
           E  + +V E+       GF+V+  +++V   +LIF   P +G  ++++Y+ ICS +GS +
Sbjct: 181 EEKVTTVAEMASKMKDTGFIVFAVLLVVSCLILIFIVAPRYGQRNILIYIIICSVIGSFS 240

Query: 189 VMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVY 248
           V +VK LG+ ++  F G     +   +I ++++  + ++Q+N+LN+ALD FNT+++ P+Y
Sbjct: 241 VTAVKGLGVTIRNFFQGLPVVRHPLPYILSLILGLSIIIQVNFLNRALDIFNTSLVFPIY 300

Query: 249 YVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDM 298
           YV FTT+ + +SI++FK+W + +   IV  L GFVTI+ G F+LH  KD+
Sbjct: 301 YVFFTTVVVASSIVLFKEWYTMSAVDIVGTLSGFVTIILGVFMLHAFKDL 350

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Mus musculus (taxid: 10090)

>sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3

 Score =  261 bits (667), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 135/296 (45%), Positives = 196/296 (66%), Gaps = 1/296 (0%)

Query: 10  GFVLAVSSSIFIGSSFIIKKKGLKKAGTTG-TRAGSGGYSYLYEPWWWAGMITMIVGEIA 68
           G  LA  SS  IGSS I+KKKGL +   TG TRA  GG+ YL +  WWAG +TM  GE+A
Sbjct: 121 GLGLAFLSSFLIGSSVILKKKGLLRLVATGATRAVDGGFGYLKDAMWWAGFLTMAAGEVA 180

Query: 69  NFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPH 128
           NF AYAFAPA +VTPLGALS++ SA+L+ + LRE L++ G LGC +CV GS  +V+HAP 
Sbjct: 181 NFGAYAFAPATVVTPLGALSVLISAILSSYFLRESLNLLGKLGCVICVAGSTVMVIHAPE 240

Query: 129 ERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSIT 188
           E  + ++ E+       GF+V+  ++LV   +LIF   P +G  ++++Y+ ICS +G+ +
Sbjct: 241 EEKVTTIMEMASKMKDTGFIVFAVLLLVSCLILIFVIAPRYGQRNILIYIIICSVIGAFS 300

Query: 189 VMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVY 248
           V +VK LGI +K  F G     +   +I ++++  +   Q+N+LN+ALD FNT+++ P+Y
Sbjct: 301 VAAVKGLGITIKNFFQGLPVVRHPLPYILSLILALSLSTQVNFLNRALDIFNTSLVFPIY 360

Query: 249 YVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDSPSS 304
           YV FTT+ + +SII+FK+W S +   I   L GFVTI+ G F+LH  KD+  S +S
Sbjct: 361 YVFFTTVVVTSSIILFKEWYSMSAVDIAGTLSGFVTIILGVFMLHAFKDLDISCAS 416

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Homo sapiens (taxid: 9606)

>sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2

 Score =  250 bits (638), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 146/314 (46%), Positives = 204/314 (64%), Gaps = 5/314 (1%)

Query: 10  GFVLAVSSSIFIGSSFIIKKKGLKKAGTTG-TRAGSGGYSYLYEPWWWAGMITMIVGEIA 68
           G VLA+SSS+FIGSSFI+KKKGL +    G TRAG GG+SYL E  WWAG+++M  GE A
Sbjct: 71  GLVLAISSSVFIGSSFILKKKGLLQLADKGITRAGQGGHSYLKEWLWWAGLLSMGAGEAA 130

Query: 69  NFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPH 128
           NFAAYAFAPA LVTPLGALS++ SA+L+ + L E+L+I G +GC L V+GS  +V+HAP 
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNERLNIHGKIGCILSVLGSTVMVIHAPQ 190

Query: 129 ERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSIT 188
           E  + S+ E+      PGF+ +  I+ V+  VLI    P  G ++++VY+ ICS +G+ +
Sbjct: 191 EGEVTSLHEMEMKLRDPGFVSFAVIISVISLVLILIVAPKKGQTNILVYIAICSLIGAFS 250

Query: 189 VMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVY 248
           V SVK LGIA+K        +     +I   ++  +   QINYLNKALDTFNT++++P+Y
Sbjct: 251 VSSVKGLGIAIKELLERKPVYKDPLFFILLTMLALSVTTQINYLNKALDTFNTSLVTPIY 310

Query: 249 YVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMG----DSPSS 304
           YV FT++ +  S I+F++W       I+  L GF TI++G FLLH  K+      +  S+
Sbjct: 311 YVFFTSMVVTCSAILFQEWYGMKAGDIIGTLSGFFTIINGIFLLHAFKNTNITWSELMST 370

Query: 305 DSPVFTNQNTNQNS 318
                 + N NQNS
Sbjct: 371 AKKEALSPNGNQNS 384

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Mus musculus (taxid: 10090)

>sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1

 Score =  221 bits (564), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 142/289 (49%), Positives = 196/289 (67%), Gaps = 1/289 (0%)

Query: 10  GFVLAVSSSIFIGSSFIIKKKGLKKAGTTG-TRAGSGGYSYLYEPWWWAGMITMIVGEIA 68
           G VLAVSSSIFIGSSFI+KKKGL +  + G TRAG GG+SYL E  WW G+++M VGE A
Sbjct: 71  GLVLAVSSSIFIGSSFILKKKGLLQLASKGITRAGQGGHSYLKEWLWWVGLLSMGVGEAA 130

Query: 69  NFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPH 128
           NFAAYAFAPA LVTPLGALS++ SA+L+ + L E L+I G +GC L ++GS  +V+HAP 
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAPQ 190

Query: 129 ERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSIT 188
           E  + S+ E+      PGF+ +  IV V+  VLI    P  G ++++VY+ ICS +G+ +
Sbjct: 191 EEEVTSLHEMEMKLRDPGFISFAVIVTVISLVLILIVAPKKGQTNILVYISICSLIGAFS 250

Query: 189 VMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVY 248
           V SVK LGIA+K        + +   ++   V++ +   QINYLNKALDTFNT++++P+Y
Sbjct: 251 VSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSIVTPIY 310

Query: 249 YVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKD 297
           YV FT++ +  S I+F++W       I+  L GF TI+ G FLLH  K+
Sbjct: 311 YVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKN 359

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Pongo abelii (taxid: 9601)

>sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1

 Score =  218 bits (556), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 140/289 (48%), Positives = 195/289 (67%), Gaps = 1/289 (0%)

Query: 10  GFVLAVSSSIFIGSSFIIKKKGLKKAGTTG-TRAGSGGYSYLYEPWWWAGMITMIVGEIA 68
           G VLAVSSSIFIGSSFI+KKKGL +  + G TRAG GG+SYL E  WW G+++M  GE A
Sbjct: 71  GLVLAVSSSIFIGSSFILKKKGLLQLASKGFTRAGQGGHSYLKEWLWWVGLLSMGAGEAA 130

Query: 69  NFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPH 128
           NFAAYAFAPA LVTPLGALS++ SA+L+ + L E L+I G +GC L ++GS  +V+HAP 
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAPQ 190

Query: 129 ERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSIT 188
           E  + S+ E+      PGF+ +  I+ V+  VLI    P  G ++++VY+ ICS +G+ +
Sbjct: 191 EEEVTSLHEMEMKLRDPGFISFAVIITVISLVLILIVAPKKGQTNILVYISICSLIGAFS 250

Query: 189 VMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVY 248
           V SVK LGIA+K        + +   ++   V++ +   QINYLNKALDTFNT++++P+Y
Sbjct: 251 VSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSLVTPIY 310

Query: 249 YVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKD 297
           YV FT++ +  S I+F++W       I+  L GF TI+ G FLLH  K+
Sbjct: 311 YVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKN 359

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

>sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1

 Score =  204 bits (519), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 115/290 (39%), Positives = 178/290 (61%), Gaps = 9/290 (3%)

Query: 10  GFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMITMIVGEIAN 69
           G  +AV SS+  GS+F+++KKG+ +A   GT       SYL +  WWAG I M VG+I N
Sbjct: 31  GLGVAVVSSLVNGSTFVLQKKGIVRAKRRGT-------SYLTDIVWWAGTIAMAVGQIGN 83

Query: 70  FAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHE 129
           F AY   P +LVTPLGAL + F ++LA ++L+EKL+I G LGC L   GSV +++H+P  
Sbjct: 84  FLAYTAVPTVLVTPLGALGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSPKS 143

Query: 130 RTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSITV 189
            ++ +  EL    T P F+ Y  IVL+++ +LIF   P HG ++++VY+ ICS +GS TV
Sbjct: 144 ESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISICSLLGSFTV 203

Query: 190 MSVKALGIALK--LSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPV 247
            S K +G+A +  L  +  +Q       +   V+  + ++Q  Y+NKAL+ F+++V   +
Sbjct: 204 PSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVFGAI 263

Query: 248 YYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKD 297
           YYV+FTTL ++AS I+F++W +      +   CGF T+  G  L+   K+
Sbjct: 264 YYVVFTTLVLLASAILFREWSNVGLVDFLGMACGFTTVSVGIVLIQVFKE 313

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
356512455	321	PREDICTED: magnesium transporter NIPA2-l	0.990	0.987	0.746	1e-136
356540093	326	PREDICTED: magnesium transporter NIPA2-l	0.996	0.978	0.727	1e-133
225433469	316	PREDICTED: magnesium transporter NIPA2 [	0.956	0.968	0.813	1e-132
298205216	343	unnamed protein product [Vitis vinifera]	0.968	0.903	0.806	1e-132
449442341	326	PREDICTED: magnesium transporter NIPA2-l	0.996	0.978	0.730	1e-132
449505617	326	PREDICTED: LOW QUALITY PROTEIN: magnesiu	0.996	0.978	0.730	1e-132
357462735	326	Magnesium transporter NIPA2 [Medicago tr	0.984	0.966	0.768	1e-131
255571788	340	Non-imprinted in Prader-Willi/Angelman s	0.987	0.929	0.699	1e-131
326529181	365	predicted protein [Hordeum vulgare subsp	0.953	0.835	0.726	1e-130
18409942	343	uncharacterized protein [Arabidopsis tha	0.990	0.924	0.697	1e-129

>gi|356512455|ref|XP_003524934.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/320 (74%), Positives = 282/320 (88%), Gaps = 3/320 (0%)

Query: 1   MGISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMI 60
           MG SSDNV GFVLAV SS+FIGSSFIIKK GLKKAG TG RAG+GG++YLYEPWWW GMI
Sbjct: 1   MGASSDNVTGFVLAVCSSVFIGSSFIIKKMGLKKAGATGKRAGAGGHAYLYEPWWWFGMI 60

Query: 61  TMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSV 120
           +MIVGE+ANFAAYAFAPA+LVTPLGALSIIFSA+LAHFIL+E+LHIFG+LGCALC+VGS 
Sbjct: 61  SMIVGEVANFAAYAFAPALLVTPLGALSIIFSAILAHFILKERLHIFGVLGCALCMVGST 120

Query: 121 SIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGI 180
           +IVLHAPHER IHSVKE+W LAT+PGFL+Y  IV+VVV +LIF   P +G ++L++YVGI
Sbjct: 121 TIVLHAPHERVIHSVKEVWQLATEPGFLIYMCIVVVVVCILIFYCAPRYGTTYLVIYVGI 180

Query: 181 CSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFN 240
           CS  GSITVMSVKA+ IA+KL+  G+NQF+Y+QTW FT++VI  CLLQINYLNKALDTFN
Sbjct: 181 CSLTGSITVMSVKAVSIAMKLTLEGNNQFIYFQTWFFTIIVIGCCLLQINYLNKALDTFN 240

Query: 241 TAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGD 300
           TAV+SP+YYVMFT+ TI ASIIMFK+WD+Q+ SQI TE+CGF+TILSGTFLLHKTKDMG+
Sbjct: 241 TAVVSPIYYVMFTSFTIFASIIMFKEWDTQDASQIATEVCGFITILSGTFLLHKTKDMGN 300

Query: 301 SPSSDSPVF--TNQNTNQNS 318
            P  +SPVF  T QN + +S
Sbjct: 301 RP-IESPVFVSTPQNVSSHS 319

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540093|ref|XP_003538525.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 232/319 (72%), Positives = 273/319 (85%)

Query: 1   MGISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMI 60
           MG + DNV G +LA+SS++FIGSSFIIKK GLKKA   G RA +GG+SYLYEPWWWAGMI
Sbjct: 1   MGKTHDNVVGLILAISSTVFIGSSFIIKKMGLKKAADHGNRAATGGHSYLYEPWWWAGMI 60

Query: 61  TMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSV 120
           +MI GEIANFAAYAFAPAILVTPLGALSIIFS+VLAHFIL+EKLHIFG+LGCALCVVGS 
Sbjct: 61  SMIAGEIANFAAYAFAPAILVTPLGALSIIFSSVLAHFILKEKLHIFGVLGCALCVVGST 120

Query: 121 SIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGI 180
           SIVLHAP E+ IHSVKE+W LAT PGF+VY   ++++V VL F+FV +HG +H++VY+GI
Sbjct: 121 SIVLHAPKEKDIHSVKEVWELATGPGFIVYICAIVILVCVLHFRFVRSHGQTHMMVYLGI 180

Query: 181 CSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFN 240
           CS  GSITVM VKA+GIALKL+F G NQFVY++TWIFTVVVI  CLLQINYLNKALD F+
Sbjct: 181 CSPTGSITVMGVKAVGIALKLTFEGTNQFVYFETWIFTVVVIGCCLLQINYLNKALDAFS 240

Query: 241 TAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGD 300
           TAV+SPVYYVMFT+ TIVASII FK+W  Q+++QI TELCGFVTILSGTFLLH+TKDMG+
Sbjct: 241 TAVVSPVYYVMFTSFTIVASIITFKEWAKQDSTQIATELCGFVTILSGTFLLHRTKDMGN 300

Query: 301 SPSSDSPVFTNQNTNQNSS 319
            PS  S   + ++ N N+ 
Sbjct: 301 KPSDASVHSSPEDNNSNTK 319

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225433469|ref|XP_002263496.1| PREDICTED: magnesium transporter NIPA2 [Vitis vinifera]

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/306 (81%), Positives = 276/306 (90%)

Query: 1   MGISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMI 60
           MG SSDNV G +LA+SSSIFIGSSFI+KKKGL+KAG +G RAG GGYSYLYEP WWAGMI
Sbjct: 1   MGNSSDNVRGLILALSSSIFIGSSFIVKKKGLRKAGASGVRAGVGGYSYLYEPLWWAGMI 60

Query: 61  TMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSV 120
           TMI GEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFIL EKLHIFG+LGC LCVVGS 
Sbjct: 61  TMIFGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILEEKLHIFGILGCVLCVVGST 120

Query: 121 SIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGI 180
           SIVLHAP E+ I SVKE+W+LAT+PGF+VY  IVLV+V +LIF+FVP +G++H+IVYVGI
Sbjct: 121 SIVLHAPQEKDIESVKEVWNLATEPGFIVYASIVLVLVLILIFRFVPRYGSTHMIVYVGI 180

Query: 181 CSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFN 240
           CS MGS+TVMSVKAL IALKL+F G NQF+Y+QTW FTVVVI  CLLQ+NYLNKALDTFN
Sbjct: 181 CSLMGSLTVMSVKALAIALKLTFLGTNQFIYFQTWFFTVVVILCCLLQVNYLNKALDTFN 240

Query: 241 TAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGD 300
           TAVISPVYYVMFTTLTI+AS+IMFKDWD+QN SQIVTELCGFVTILSGTFLLHKTKDMG+
Sbjct: 241 TAVISPVYYVMFTTLTILASMIMFKDWDTQNGSQIVTELCGFVTILSGTFLLHKTKDMGN 300

Query: 301 SPSSDS 306
             S  S
Sbjct: 301 EESKHS 306

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|298205216|emb|CBI17275.3| unnamed protein product [Vitis vinifera]

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/310 (80%), Positives = 278/310 (89%)

Query: 1   MGISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMI 60
           MG SSDNV G +LA+SSSIFIGSSFI+KKKGL+KAG +G RAG GGYSYLYEP WWAGMI
Sbjct: 1   MGNSSDNVRGLILALSSSIFIGSSFIVKKKGLRKAGASGVRAGVGGYSYLYEPLWWAGMI 60

Query: 61  TMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSV 120
           TMI GEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFIL EKLHIFG+LGC LCVVGS 
Sbjct: 61  TMIFGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILEEKLHIFGILGCVLCVVGST 120

Query: 121 SIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGI 180
           SIVLHAP E+ I SVKE+W+LAT+PGF+VY  IVLV+V +LIF+FVP +G++H+IVYVGI
Sbjct: 121 SIVLHAPQEKDIESVKEVWNLATEPGFIVYASIVLVLVLILIFRFVPRYGSTHMIVYVGI 180

Query: 181 CSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFN 240
           CS MGS+TVMSVKAL IALKL+F G NQF+Y+QTW FTVVVI  CLLQ+NYLNKALDTFN
Sbjct: 181 CSLMGSLTVMSVKALAIALKLTFLGTNQFIYFQTWFFTVVVILCCLLQVNYLNKALDTFN 240

Query: 241 TAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGD 300
           TAVISPVYYVMFTTLTI+AS+IMFKDWD+QN SQIVTELCGFVTILSGTFLLHKTKDMG+
Sbjct: 241 TAVISPVYYVMFTTLTILASMIMFKDWDTQNGSQIVTELCGFVTILSGTFLLHKTKDMGN 300

Query: 301 SPSSDSPVFT 310
             S  S V +
Sbjct: 301 EESKHSMVIS 310

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442341|ref|XP_004138940.1| PREDICTED: magnesium transporter NIPA2-like [Cucumis sativus]

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/319 (73%), Positives = 274/319 (85%)

Query: 1   MGISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMI 60
           MGISSDNV GF+LAVSSS+FIGSS IIKKKGL K+G  GTRA SGG+SYL EPWWWAGMI
Sbjct: 1   MGISSDNVRGFLLAVSSSVFIGSSTIIKKKGLIKSGAAGTRAASGGFSYLCEPWWWAGMI 60

Query: 61  TMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSV 120
           T+IVGE ANF AYA+APAILVTPLGALSIIFSAVLAHF+L+EKLHIFG+LGC LC+VGS 
Sbjct: 61  TLIVGETANFVAYAYAPAILVTPLGALSIIFSAVLAHFMLKEKLHIFGILGCVLCIVGST 120

Query: 121 SIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGI 180
           +IVLHAP E+ I SVKE+WHLAT+P FLVY  +V+VVV VL+FK+ P +G SH+I+YVGI
Sbjct: 121 TIVLHAPLEKKIESVKEVWHLATEPVFLVYSFLVIVVVVVLVFKYAPRYGQSHMIIYVGI 180

Query: 181 CSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFN 240
           CS MGS+TVMSVKA+ IA KL+F G NQF Y++TW FTV VI  C+LQ+ YLNKALD FN
Sbjct: 181 CSLMGSLTVMSVKAVAIAAKLTFEGMNQFKYFETWFFTVFVIGCCILQVIYLNKALDAFN 240

Query: 241 TAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGD 300
           +AVISPVYYVMFTT TI+AS+IMFKDWD+Q+ +QI TE+CGF+TILSGTFLLHKTKDMG 
Sbjct: 241 SAVISPVYYVMFTTFTILASMIMFKDWDTQSATQIATEVCGFITILSGTFLLHKTKDMGK 300

Query: 301 SPSSDSPVFTNQNTNQNSS 319
            P +  P+F  Q+ +QN +
Sbjct: 301 GPPTQPPLFQTQSHHQNQN 319

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449505617|ref|XP_004162523.1| PREDICTED: LOW QUALITY PROTEIN: magnesium transporter NIPA2-like [Cucumis sativus]

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/319 (73%), Positives = 274/319 (85%)

Query: 1   MGISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMI 60
           MGISSDNV GF+LAVSSS+FIGSS IIKKKGL K+G  GTRA SGG+SYL EPWWWAGMI
Sbjct: 1   MGISSDNVRGFLLAVSSSVFIGSSTIIKKKGLIKSGAAGTRAASGGFSYLCEPWWWAGMI 60

Query: 61  TMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSV 120
           T+IVGE ANF AYA+APAILVTPLGALSIIFSAVLAHF+L+EKLHIFG+LGC LC+VGS 
Sbjct: 61  TLIVGETANFVAYAYAPAILVTPLGALSIIFSAVLAHFMLKEKLHIFGILGCVLCIVGST 120

Query: 121 SIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGI 180
           +IVLHAP E+ I SVKE+WHLAT+P FLVY  +V+VVV VL+FK+ P +G SH+I+YVGI
Sbjct: 121 TIVLHAPLEKXIESVKEVWHLATEPVFLVYSFLVIVVVVVLVFKYAPRYGQSHMIIYVGI 180

Query: 181 CSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFN 240
           CS MGS+TVMSVKA+ IA KL+F G NQF Y++TW FTV VI  C+LQ+ YLNKALD FN
Sbjct: 181 CSLMGSLTVMSVKAVAIAAKLTFEGMNQFKYFETWFFTVFVIGCCILQVIYLNKALDAFN 240

Query: 241 TAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGD 300
           +AVISPVYYVMFTT TI+AS+IMFKDWD+Q+ +QI TE+CGF+TILSGTFLLHKTKDMG 
Sbjct: 241 SAVISPVYYVMFTTFTILASMIMFKDWDTQSATQIATEVCGFITILSGTFLLHKTKDMGK 300

Query: 301 SPSSDSPVFTNQNTNQNSS 319
            P +  P+F  Q+ +QN +
Sbjct: 301 GPPTQPPLFQTQSHHQNQN 319

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357462735|ref|XP_003601649.1| Magnesium transporter NIPA2 [Medicago truncatula] gi|355490697|gb|AES71900.1| Magnesium transporter NIPA2 [Medicago truncatula]

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/319 (76%), Positives = 275/319 (86%), Gaps = 4/319 (1%)

Query: 1   MGISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMI 60
           MGISSDNV G  LA+SSSIFIGSSFIIKK GLKKA T G RA +GG+SYLYEP WWAGM 
Sbjct: 1   MGISSDNVIGLCLALSSSIFIGSSFIIKKMGLKKAATNGNRAATGGHSYLYEPRWWAGMT 60

Query: 61  TMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSV 120
           +MIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFIL+E+LHIFG+LGCALCVVGS 
Sbjct: 61  SMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKERLHIFGVLGCALCVVGST 120

Query: 121 SIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGI 180
           +IVLHAPHER IHSVKE+WHLAT+PGF+VY  +++ +V VLIF F  ++G +HL+VYVGI
Sbjct: 121 TIVLHAPHEREIHSVKEVWHLATEPGFIVYSCLMVALVLVLIFVFARSYGQTHLVVYVGI 180

Query: 181 CSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFN 240
           CS  GSITVM VKA+GIALKLSF G NQF+Y++TW FT+VVI  CLLQINYLNKALDTFN
Sbjct: 181 CSLTGSITVMCVKAVGIALKLSFEGKNQFIYFETWFFTLVVIGCCLLQINYLNKALDTFN 240

Query: 241 TAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGD 300
           T VISPVYYVMFT+ TI+ASIIMFK+WDSQ+ SQIVTELCGFVTILSGTFLLHKTKDMG+
Sbjct: 241 TNVISPVYYVMFTSFTIIASIIMFKEWDSQDASQIVTELCGFVTILSGTFLLHKTKDMGN 300

Query: 301 SPS----SDSPVFTNQNTN 315
            P+    S SP   N    
Sbjct: 301 KPAEISLSSSPHRPNNTAK 319

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571788|ref|XP_002526837.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis] gi|223533841|gb|EEF35572.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/316 (69%), Positives = 269/316 (85%)

Query: 2   GISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMIT 61
           G+SSDN+ G VLA+SSS FIG+SFI+KKKGLKKA ++G RAG+GGYSYLYEP WW GMIT
Sbjct: 7   GMSSDNIKGLVLALSSSFFIGASFIVKKKGLKKAASSGLRAGAGGYSYLYEPLWWIGMIT 66

Query: 62  MIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVS 121
           MIVGEIANFAAYAFAPAILVTPLGALSII S+VLAH ILRE+LH+FG+LGCALCVVGS +
Sbjct: 67  MIVGEIANFAAYAFAPAILVTPLGALSIIISSVLAHVILRERLHMFGILGCALCVVGSTA 126

Query: 122 IVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGIC 181
           IVLHAP ER I SVKE+W LAT+P FL+Y   V+  V ++I + +P +G SH++VY+ +C
Sbjct: 127 IVLHAPQEREIESVKEVWELATEPAFLLYAAFVIGAVFIIIIRVIPQYGQSHVLVYIAVC 186

Query: 182 SAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNT 241
           S +GS++VMSVKAL IALKL+FSG NQ VY QTW+FT+VVI   + Q+NYLNKALDTFNT
Sbjct: 187 SLVGSLSVMSVKALSIALKLTFSGMNQLVYPQTWVFTLVVITCVITQMNYLNKALDTFNT 246

Query: 242 AVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDS 301
           AV+SP+YYVMFT+LTI+AS+IMFKDWD QN +QIVTE+CGFVTILSGTFLLHKTKDM + 
Sbjct: 247 AVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKTKDMVEG 306

Query: 302 PSSDSPVFTNQNTNQN 317
            S   P+   +++ ++
Sbjct: 307 SSPSLPLSIPKHSEED 322

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326529181|dbj|BAK00984.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 223/307 (72%), Positives = 264/307 (85%), Gaps = 2/307 (0%)

Query: 2   GISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTT--GTRAGSGGYSYLYEPWWWAGM 59
           G+SSDN+ G VLA+SSS+FIG+SFIIKKKGLKKA ++  G RAG GGYSYLYEP WW GM
Sbjct: 24  GMSSDNIKGLVLAISSSLFIGASFIIKKKGLKKAASSSGGVRAGVGGYSYLYEPLWWVGM 83

Query: 60  ITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGS 119
           ITM+VGE+ANF AYAFAPAILVTPLGALSII SAVLAH +LREKLHIFG+LGC LCVVGS
Sbjct: 84  ITMVVGEVANFVAYAFAPAILVTPLGALSIIISAVLAHVMLREKLHIFGVLGCVLCVVGS 143

Query: 120 VSIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVG 179
            +IVLHAP ER I SV E+W LAT+P F+ Y  +VL +V +L+FKFVP +G +H++VY+G
Sbjct: 144 TTIVLHAPQERQIESVTEVWGLATEPAFMCYVAVVLAIVALLVFKFVPLYGQTHVMVYIG 203

Query: 180 ICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTF 239
           +CS +GSI+VMSVKALGIALKL+FSG NQ +Y QTW+FT+VVI   + Q+NYLNKALDTF
Sbjct: 204 VCSLVGSISVMSVKALGIALKLTFSGTNQLIYPQTWVFTMVVISCIITQMNYLNKALDTF 263

Query: 240 NTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMG 299
           NTAV+SP+YY MFT+LTI+AS+IMFKDWD QN +QIVTE+CGFVTI SGTFLLHKTKDM 
Sbjct: 264 NTAVVSPIYYTMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTIFSGTFLLHKTKDMA 323

Query: 300 DSPSSDS 306
           D  S+ S
Sbjct: 324 DGLSNSS 330

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18409942|ref|NP_565027.1| uncharacterized protein [Arabidopsis thaliana] gi|15028241|gb|AAK76709.1| unknown protein [Arabidopsis thaliana] gi|19310781|gb|AAL85121.1| unknown protein [Arabidopsis thaliana] gi|332197128|gb|AEE35249.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 221/317 (69%), Positives = 269/317 (84%)

Query: 2   GISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMIT 61
           G+SSDN+ G VLA+SSS+FIG+SFI+KKKGLKKA +TGTRAG GGYSYLYEP WW GM T
Sbjct: 14  GMSSDNIKGLVLALSSSLFIGASFIVKKKGLKKAASTGTRAGVGGYSYLYEPLWWIGMTT 73

Query: 62  MIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVS 121
           M++GEIANFAAYAFAPAILVTPLGA+SII SAVLAH ILREKLHIFG+LGCALCVVGS +
Sbjct: 74  MLLGEIANFAAYAFAPAILVTPLGAVSIIISAVLAHIILREKLHIFGILGCALCVVGSTT 133

Query: 122 IVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGIC 181
           IVLHAP ER I SV E+W+LAT+P F+ Y  +V+     LI +FVP +G ++++VY+GIC
Sbjct: 134 IVLHAPQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVPQYGQTNVMVYIGIC 193

Query: 182 SAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNT 241
           S +GS++VMSVKALGIALKL+FSG NQ  Y QTWIFT+VV+   + Q+NYLNKALDTFNT
Sbjct: 194 SLVGSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVTQLNYLNKALDTFNT 253

Query: 242 AVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDS 301
           A++SP+YYVMFT+LTI+AS+IMFKDWD QN +QIVTE+CGFVTILSGTFLLH+TKDM + 
Sbjct: 254 AIVSPIYYVMFTSLTILASVIMFKDWDRQNGTQIVTEICGFVTILSGTFLLHRTKDMVEG 313

Query: 302 PSSDSPVFTNQNTNQNS 318
            S   P+  +++ N+  
Sbjct: 314 SSVILPLRISKHINEEE 330

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
TAIR|locus:2119540	336	AT4G13800 [Arabidopsis thalian	0.990	0.943	0.585	8.4e-97
TAIR|locus:2076186	335	AT3G23870 "AT3G23870" [Arabido	0.990	0.946	0.579	1.6e-95
TAIR|locus:2016084	343	AT1G71900 "AT1G71900" [Arabido	0.981	0.915	0.560	8.3e-90
TAIR|locus:2009343	368	AT1G34470 "AT1G34470" [Arabido	0.943	0.820	0.575	1.4e-89
TAIR|locus:2136912	386	AT4G09640 "AT4G09640" [Arabido	0.943	0.782	0.576	2.5e-88
TAIR|locus:2047112	328	AT2G21120 [Arabidopsis thalian	0.953	0.929	0.478	1.5e-74
TAIR|locus:2141742	326	AT4G38730 "AT4G38730" [Arabido	0.915	0.898	0.488	1.7e-73
CGD|CAL0004327	368	orf19.5352 [Candida albicans (	0.812	0.706	0.430	1.1e-57
UNIPROTKB|Q5A5P7	368	CaO19.12812 "Putative uncharac	0.812	0.706	0.430	1.1e-57
FB|FBgn0032451	385	spict "spichthyin" [Drosophila	0.765	0.636	0.412	2.1e-52

TAIR|locus:2119540 AT4G13800 [Arabidopsis thaliana (taxid:3702)]

 Score = 962 (343.7 bits), Expect = 8.4e-97, P = 8.4e-97
 Identities = 191/326 (58%), Positives = 221/326 (67%)

Query:     3 ISSDNVHGFVLAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYEPWWWAGMITM 62
             +S DN+HG +LAV                                  LYEPWWWAGMITM
Sbjct:     4 MSPDNIHGVILAVSSSIFIGSSFIIKKKGLKKAGVSGARAGEGGYGYLYEPWWWAGMITM 63

Query:    63 IVGEIXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSI 122
             IVGEI           ILVTPLGALSIIFSAVLAHFIL EKLH+FG+LGC LCVVGS +I
Sbjct:    64 IVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILEEKLHMFGILGCVLCVVGSTTI 123

Query:   123 VLHAPHERTIHSVKELWHLATQPXXXXXXXXXXXXXXXXXXXXXPTHGNSHLIVYVGICS 182
             VLHAPHE+ I SVK++WHLAT+P                     P +G +H+IVYVGICS
Sbjct:   124 VLHAPHEQGIESVKQVWHLATEPGFLAYSAVVLVVVLALIFYYEPRYGKTHMIVYVGICS 183

Query:   183 AMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTA 242
              MGS+TVMSVKA+ IA+KL+FSG NQF Y+  WIF +VV   C+LQINYLNKALD FNTA
Sbjct:   184 LMGSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCILQINYLNKALDNFNTA 243

Query:   243 VISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDSP 302
             VISPVYYVMFTT TI+AS+IMFKDW SQ+  QI TELCGFVTILSGTFLLHKTKDMG+S 
Sbjct:   244 VISPVYYVMFTTFTILASMIMFKDWASQSGLQIATELCGFVTILSGTFLLHKTKDMGNST 303

Query:   303 S---------SDSPVFTNQNTNQNSS 319
             S          D+PVF N  ++++S+
Sbjct:   304 SLRGSTSHSPRDTPVFINSGSSRSSN 329

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076186 AT3G23870 "AT3G23870" [Arabidopsis thaliana (taxid:3702)]

 Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
 Identities = 189/326 (57%), Positives = 222/326 (68%)

Query:     3 ISSDNVHGFVLAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYEPWWWAGMITM 62
             +S DN++G +LAV                                  L EPWWWAGMITM
Sbjct:     4 MSPDNINGVILAVSSSIFIGSSFIIKKKGLKKAGASGVRAGEGGYGYLKEPWWWAGMITM 63

Query:    63 IVGEIXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSI 122
             IVGE+           ILVTPLGALSIIFSAVLAHFIL+EKLH+FG+LGC LCVVGS +I
Sbjct:    64 IVGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKEKLHMFGILGCILCVVGSTTI 123

Query:   123 VLHAPHERTIHSVKELWHLATQPXXXXXXXXXXXXXXXXXXXXXPTHGNSHLIVYVGICS 182
             VLHAPHE+ I SVK++W LA +P                     P +G +H+IVYVGICS
Sbjct:   124 VLHAPHEQKIESVKQIWQLAIEPGFLVYSAVIVIVVAILIFYYEPRYGKTHMIVYVGICS 183

Query:   183 AMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTA 242
              MGS+TVMSVKA+ IA+KL+FSG NQF Y+ TWIF +VV   C+LQINYLNKALDTFNTA
Sbjct:   184 LMGSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCILQINYLNKALDTFNTA 243

Query:   243 VISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDS- 301
             VISPVYYVMFTT TI+AS+IMFKDW SQ+  +I TELCGFVTILSGTFLLHKTKDMG+S 
Sbjct:   244 VISPVYYVMFTTFTIIASMIMFKDWASQSGLKIATELCGFVTILSGTFLLHKTKDMGNSA 303

Query:   302 --------PSSDSPVFTNQNTNQNSS 319
                     P+ D+PVFTN  + ++SS
Sbjct:   304 SGRGSISMPTRDTPVFTNSGSGRSSS 329

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2016084 AT1G71900 "AT1G71900" [Arabidopsis thaliana (taxid:3702)]

 Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
 Identities = 177/316 (56%), Positives = 218/316 (68%)

Query:     2 GISSDNVHGFVLAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYEPWWWAGMIT 61
             G+SSDN+ G VLA+                                  LYEP WW GM T
Sbjct:    14 GMSSDNIKGLVLALSSSLFIGASFIVKKKGLKKAASTGTRAGVGGYSYLYEPLWWIGMTT 73

Query:    62 MIVGEIXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVS 121
             M++GEI           ILVTPLGA+SII SAVLAH ILREKLHIFG+LGCALCVVGS +
Sbjct:    74 MLLGEIANFAAYAFAPAILVTPLGAVSIIISAVLAHIILREKLHIFGILGCALCVVGSTT 133

Query:   122 IVLHAPHERTIHSVKELWHLATQPXXXXXXXXXXXXXXXXXXXXXPTHGNSHLIVYVGIC 181
             IVLHAP ER I SV E+W+LAT+P                     P +G ++++VY+GIC
Sbjct:   134 IVLHAPQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVPQYGQTNVMVYIGIC 193

Query:   182 SAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLL-QINYLNKALDTFN 240
             S +GS++VMSVKALGIALKL+FSG NQ  Y QTWIFT+VV+ TC++ Q+NYLNKALDTFN
Sbjct:   194 SLVGSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVL-TCVVTQLNYLNKALDTFN 252

Query:   241 TAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGD 300
             TA++SP+YYVMFT+LTI+AS+IMFKDWD QN +QIVTE+CGFVTILSGTFLLH+TKDM +
Sbjct:   253 TAIVSPIYYVMFTSLTILASVIMFKDWDRQNGTQIVTEICGFVTILSGTFLLHRTKDMVE 312

Query:   301 SPSSDSPVFTNQNTNQ 316
               S   P+  +++ N+
Sbjct:   313 GSSVILPLRISKHINE 328

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2009343 AT1G34470 "AT1G34470" [Arabidopsis thaliana (taxid:3702)]

 Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
 Identities = 175/304 (57%), Positives = 210/304 (69%)

Query:     2 GISSDNVHGFVLAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYEPWWWAGMIT 61
             G+SSDN+ G VLA+                                  L EP WW GMIT
Sbjct:    14 GMSSDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYSYLLEPLWWVGMIT 73

Query:    62 MIVGEIXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVS 121
             MIVGEI           ILVTPLGALSII SA LAH IL EKLH FG+LGC LCVVGS++
Sbjct:    74 MIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHVILHEKLHTFGLLGCVLCVVGSIT 133

Query:   122 IVLHAPHERTIHSVKELWHLATQPXXXXXXXXXXXXXXXXXXXXXPTHGNSHLIVYVGIC 181
             IVLHAP E+ I SV ++W+LAT+P                     P +G SH++VY+G+C
Sbjct:   134 IVLHAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVPQYGQSHVMVYIGVC 193

Query:   182 SAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLL-QINYLNKALDTFN 240
             S +GS++VMSVKALGIALKL+FSG NQ +Y QTW+FT++V+ TC++ Q+NYLNKALDTFN
Sbjct:   194 SLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVL-TCVITQMNYLNKALDTFN 252

Query:   241 TAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGD 300
             TAV+SP+YYVMFT+LTI+AS+IMFKDWD Q+ +QIVTELCGFVTILSGTFLLHKTKDM D
Sbjct:   253 TAVVSPIYYVMFTSLTILASVIMFKDWDRQDGTQIVTELCGFVTILSGTFLLHKTKDMVD 312

Query:   301 SPSS 304
               SS
Sbjct:   313 GSSS 316

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2136912 AT4G09640 "AT4G09640" [Arabidopsis thaliana (taxid:3702)]

 Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
 Identities = 174/302 (57%), Positives = 206/302 (68%)

Query:     2 GISSDNVHGFVLAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYEPWWWAGMIT 61
             G+SSDNV G VLA+                                  L EP WW GMIT
Sbjct:    14 GMSSDNVKGLVLALSSSIFIGASFIVKKKGLKKAGASGLRAGSGGYSYLLEPLWWIGMIT 73

Query:    62 MIVGEIXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVS 121
             MIVGEI           ILVTPLGALSII SA LAH IL+EKLH FG+LGCALC+VGSV+
Sbjct:    74 MIVGEIANFAAYAFAPAILVTPLGALSIIISASLAHIILQEKLHTFGILGCALCIVGSVT 133

Query:   122 IVLHAPHERTIHSVKELWHLATQPXXXXXXXXXXXXXXXXXXXXXPTHGNSHLIVYVGIC 181
             IVLHAP E+ I SV E+W+LAT+P                     P +G SH++VY+G+C
Sbjct:   134 IVLHAPQEQDIVSVLEVWNLATEPAFLFYAAAVVGAAIVLIVQFIPLYGQSHVMVYIGVC 193

Query:   182 SAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNT 241
             S +GS++VMSVKALGIALKL+FSG NQ  Y QTW+FTV+V+F  + Q+NYLNKALDTFNT
Sbjct:   194 SLIGSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCVITQMNYLNKALDTFNT 253

Query:   242 AVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDS 301
             AV+SP+YYVMFT+LTI+AS+IMFKDWD Q+ +QI+TELCGFVTILSGTFLLH T DM D 
Sbjct:   254 AVVSPIYYVMFTSLTILASVIMFKDWDRQSGTQIMTELCGFVTILSGTFLLHTTTDMVDG 313

Query:   302 PS 303
              S
Sbjct:   314 ES 315

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2047112 AT2G21120 [Arabidopsis thaliana (taxid:3702)]

 Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
 Identities = 147/307 (47%), Positives = 193/307 (62%)

Query:     3 ISSDNVHGFVLAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYEPWWWAGMITM 62
             + +DN  G +LAV                                  L EP WWAGM+TM
Sbjct:     1 METDNGKGLILAVASSVFIGSSFILKKKGLKRAGAIGTRAGYGGYTYLLEPLWWAGMVTM 60

Query:    63 IVGEIXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSI 122
             IVGE            +LVTPLGALSII SAVLAHF+L+EKL   G+LGC  C+VGSV I
Sbjct:    61 IVGEAANFVAYIYAPAVLVTPLGALSIIISAVLAHFLLKEKLKKMGVLGCVSCIVGSVVI 120

Query:   123 VLHAPHERTIHSVKELWHLATQPXXXXXXXXXXXXXXXXXXXXXPTHGNSHLIVYVGICS 182
             V+HAP E+T +SV+E+W+LATQP                     P  G ++++VY+GICS
Sbjct:   121 VIHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFEPLCGQTNILVYIGICS 180

Query:   183 AMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLL-QINYLNKALDTFNT 241
              MG++TVMS+KA+GIA+KL+  G +Q  Y QTW+F +V + TC++ Q+ YLNKALDTFN 
Sbjct:   181 LMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAV-TCVVTQLIYLNKALDTFNA 239

Query:   242 AVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDS 301
             A++SPVYYVMFTTLTIVAS IMFKDW  Q+ + + +ELCGF+T+L+GT +LH T++    
Sbjct:   240 AIVSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTREEEQQ 299

Query:   302 PSSDSPV 308
              +S   V
Sbjct:   300 QASSEHV 306

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2141742 AT4G38730 "AT4G38730" [Arabidopsis thaliana (taxid:3702)]

 Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
 Identities = 143/293 (48%), Positives = 181/293 (61%)

Query:     5 SDNVHGFVLAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYEPWWWAGMITMIV 64
             SDN  G VLAV                                  L EP WW G++TM  
Sbjct:     3 SDNEMGLVLAVSSSVFIGSSFILKKKGLKRAAANGTRAGFGGYTYLLEPLWWVGLVTMTF 62

Query:    65 GEIXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVL 124
             GEI           +LVTPLGALSII SAVLAHF+L EKL   G+ GC  C+VGSV IV+
Sbjct:    63 GEIANFVAYVYAPAVLVTPLGALSIIISAVLAHFLLDEKLRKMGVWGCVCCIVGSVMIVI 122

Query:   125 HAPHERTIHSVKELWHLATQPXXXXXXXXXXXXXXXXXXXXXPTHGNSHLIVYVGICSAM 184
             HAP E+T +SV+E+W LA QP                     P  G ++++VY+GICS M
Sbjct:   123 HAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIVLALILYCEPLCGQTNILVYIGICSLM 182

Query:   185 GSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVI 244
             GS+TVMS+KA+GIA+KL+F G NQ  Y +TW F +V     ++Q+ YLNKALDTFN A++
Sbjct:   183 GSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFAMVAAICVVMQMIYLNKALDTFNAAIV 242

Query:   245 SPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKD 297
             SP+YYVMFTTLTIVAS IMFKDW+ QNT  I +E+CGF+T+L+GT +LH T++
Sbjct:   243 SPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASEICGFITVLTGTVILHSTRE 295

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

CGD|CAL0004327 orf19.5352 [Candida albicans (taxid:5476)]

 Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
 Identities = 112/260 (43%), Positives = 164/260 (63%)

Query:    50 LYEPWWWAGMITMIVGEIXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILREKLHIFGM 109
             L  P WW GMITM +GEI           ILVTPLGALS+I  AVLA   L+E+L   G 
Sbjct:    48 LQNPIWWGGMITMAIGEIANFAAYTFAPAILVTPLGALSVIIGAVLAAIFLKERLGTLGK 107

Query:   110 LGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPXXXXXXXXXXXXXXXXXXXXXPTH 169
             +GCA+C++GSV I+LHAP ++ + +V E+   ATQP                     P +
Sbjct:   108 MGCAICLMGSVIIILHAPPDKEVQTVDEILGYATQPGFMFYCTVVTLYSLFMIYKIVPKY 167

Query:   170 GNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQI 229
             GN++ ++Y+ ICS++GSI+VMS+KA GIALKL+  G+NQF +  T++F +VV    + Q+
Sbjct:   168 GNTNPMIYLSICSSVGSISVMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALCIVTQM 227

Query:   230 NYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGT 289
             NY NKALD F+T++++P+YYV FTT T+ AS I+FK +++ +   I++ L GF+ I SG 
Sbjct:   228 NYFNKALDQFDTSIVNPLYYVTFTTFTLAASFILFKGFNTSSAVDIISLLIGFLIIFSGV 287

Query:   290 FLLHKTKDMGDSPSSDSPVF 309
             +LL+ ++        D  +F
Sbjct:   288 YLLNISRSESPMVDRDREIF 307

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5A5P7 CaO19.12812 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
 Identities = 112/260 (43%), Positives = 164/260 (63%)

Query:    50 LYEPWWWAGMITMIVGEIXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILREKLHIFGM 109
             L  P WW GMITM +GEI           ILVTPLGALS+I  AVLA   L+E+L   G 
Sbjct:    48 LQNPIWWGGMITMAIGEIANFAAYTFAPAILVTPLGALSVIIGAVLAAIFLKERLGTLGK 107

Query:   110 LGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPXXXXXXXXXXXXXXXXXXXXXPTH 169
             +GCA+C++GSV I+LHAP ++ + +V E+   ATQP                     P +
Sbjct:   108 MGCAICLMGSVIIILHAPPDKEVQTVDEILGYATQPGFMFYCTVVTLYSLFMIYKIVPKY 167

Query:   170 GNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQI 229
             GN++ ++Y+ ICS++GSI+VMS+KA GIALKL+  G+NQF +  T++F +VV    + Q+
Sbjct:   168 GNTNPMIYLSICSSVGSISVMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALCIVTQM 227

Query:   230 NYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGT 289
             NY NKALD F+T++++P+YYV FTT T+ AS I+FK +++ +   I++ L GF+ I SG 
Sbjct:   228 NYFNKALDQFDTSIVNPLYYVTFTTFTLAASFILFKGFNTSSAVDIISLLIGFLIIFSGV 287

Query:   290 FLLHKTKDMGDSPSSDSPVF 309
             +LL+ ++        D  +F
Sbjct:   288 YLLNISRSESPMVDRDREIF 307

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

FB|FBgn0032451 spict "spichthyin" [Drosophila melanogaster (taxid:7227)]

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 102/247 (41%), Positives = 155/247 (62%)

Query:    54 W-WWAGMITMIVGEIXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILREKLHIFGMLGC 112
             W WWAG++TM VGE             LVTPLGALS+I SAV+A   L EKL++ G +GC
Sbjct:    92 WIWWAGLLTMGVGEAANFAAYAFAPASLVTPLGALSVIISAVMASRFLNEKLNLLGKIGC 151

Query:   113 ALCVVGSVSIVLHAPHERTIHSVKELWHLATQPXXXXXXXXXXXXXXXXXXXXXPTHGNS 172
              LC++GS  IV+H+P E+ I  ++ L+ +   P                     P HG++
Sbjct:   152 FLCILGSTIIVIHSPKEKEIEDLQLLFDMLLDPVFILYVICIVGSTVFVACFIAPRHGHT 211

Query:   173 HLIVYVGICSAMGSITVMSVKALGIALKLSFS-GHNQFVYYQTWIFTVVVIFTCLLQINY 231
             +++VY+ +CS +GS+TVMS KALG+A++ + + G N F+ +  W   +V +    +Q+NY
Sbjct:   212 NVVVYIFLCSGIGSLTVMSCKALGLAIRQTLNNGGNVFLTWMPWFLILVTVTFIAIQMNY 271

Query:   232 LNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFL 291
             LNKALD FNT++++PVYYVMFTTL I AS I+FK++       I+ ++CGF+ +++  FL
Sbjct:   272 LNKALDIFNTSIVTPVYYVMFTTLVIAASAILFKEFTHMRFDDILGDVCGFLIVITAVFL 331

Query:   292 LHKTKDM 298
             L+  +D+
Sbjct:   332 LNAFRDI 338

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0015693 "magnesium ion transport" evidence=IEA

GO:0030514 "negative regulation of BMP signaling pathway" evidence=IDA

GO:0045886 "negative regulation of synaptic growth at neuromuscular junction" evidence=IMP

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3SWX0	NIPA2_BOVIN	No assigned EC number	0.4790	0.9687	0.8611	yes	no
Q5R7Q3	NIPA2_PONAB	No assigned EC number	0.4662	0.9687	0.8611	yes	no
Q8N8Q9	NIPA2_HUMAN	No assigned EC number	0.4662	0.9687	0.8611	yes	no
Q9JJC8	NIPA2_MOUSE	No assigned EC number	0.4533	0.9687	0.8635	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00031623001 SubName- Full=Chromosome chr5 scaffold_58, whole genome shotgun sequence; (316 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	320
pfam05653	300	pfam05653, Mg_trans_NIPA, Magnesium transporter NI	1e-154
pfam13536	112	pfam13536, EmrE, Multidrug resistance efflux trans	0.003

>gnl|CDD|114381 pfam05653, Mg_trans_NIPA, Magnesium transporter NIPA

 Score =  433 bits (1115), Expect = e-154
 Identities = 192/298 (64%), Positives = 231/298 (77%)

Query: 4   SSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMITMI 63
           ++DN  G +LAVSSSIFIGSSFIIKKKGL +    G RAG GGY YL E  WWAG++TMI
Sbjct: 2   NTDNYIGLILAVSSSIFIGSSFIIKKKGLLRLARGGMRAGEGGYGYLKEWLWWAGLLTMI 61

Query: 64  VGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIV 123
           VGE ANFAAYAFAPA LVTPLGALS+I SAVL+ F L EKL++FG LGC LC+VGS  IV
Sbjct: 62  VGEAANFAAYAFAPATLVTPLGALSVIISAVLSSFFLNEKLNLFGKLGCVLCIVGSTVIV 121

Query: 124 LHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSA 183
           +HAP E+ I SV+E+W+LAT PGFLVY  +V+ VV +LIF   P HG ++++VY+ ICS 
Sbjct: 122 IHAPKEQEIESVREVWNLATDPGFLVYVILVVGVVLILIFFVEPRHGQTNILVYITICSL 181

Query: 184 MGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAV 243
           +GS+TVMSVKALGIA+KL+FSG NQ  Y Q WIF VVV+   + QINYLNKALD FNT++
Sbjct: 182 IGSLTVMSVKALGIAIKLTFSGKNQLGYPQFWIFLVVVVTCVVTQINYLNKALDIFNTSI 241

Query: 244 ISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDS 301
           ++PVYYV FTT  I AS I+FK+W  Q+   I  ELCGF TIL GTFLLH T+D+  S
Sbjct: 242 VTPVYYVFFTTSVIAASAILFKEWLGQSFDDIAGELCGFFTILLGTFLLHATRDIEFS 299

NIPA (nonimprinted in Prader-Willi/Angelman syndrome) is a family of integral membrane proteins which function as magnesium transporters. Length = 300

>gnl|CDD|222207 pfam13536, EmrE, Multidrug resistance efflux transporter

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 53  PWWWAGMITMIVGEIANFAAYAFAPAIL---VTPLGALSIIFSAVLAHFILREKLHIFGM 109
           PW W  +  +I      +A    A       V  + AL+ +F+A+L   + +++L    +
Sbjct: 33  PWLWLILAGLIGF--LFYALLCLALQYGPGWVVAITALTPVFAALLGRLLFKQRLPKREL 90

Query: 110 LGCALCVVGSVSIVLHAPHE 129
           L  A+ + G V + +     
Sbjct: 91  LASAIILAGVVLMQVTEATG 110

This is a membrane protein family acting as a multidrug resistance efflux transporter. Length = 112

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	320
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	100.0
KOG2922	335	consensus Uncharacterized conserved protein [Funct	100.0
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.29
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	99.23
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.11
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.98
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.95
PRK15430	296	putative chloramphenical resistance permease RarD;	98.93
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.9
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.89
PLN00411	358	nodulin MtN21 family protein; Provisional	98.88
PRK11272	292	putative DMT superfamily transporter inner membran	98.81
PRK11689	295	aromatic amino acid exporter; Provisional	98.78
COG2510	140	Predicted membrane protein [Function unknown]	98.78
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	98.71
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.69
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.68
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.55
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.46
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.35
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.31
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.28
PRK09541	110	emrE multidrug efflux protein; Reviewed	98.28
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.18
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.14
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.03
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.99
PRK13499	345	rhamnose-proton symporter; Provisional	97.97
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.93
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.81
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.78
PRK11431	105	multidrug efflux system protein; Provisional	97.68
PLN00411	358	nodulin MtN21 family protein; Provisional	97.66
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.64
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.64
PRK11689	295	aromatic amino acid exporter; Provisional	97.56
COG2076	106	EmrE Membrane transporters of cations and cationic	97.53
PRK11272	292	putative DMT superfamily transporter inner membran	97.41
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.38
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.36
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.33
COG2510	140	Predicted membrane protein [Function unknown]	97.32
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.2
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.07
COG2962	293	RarD Predicted permeases [General function predict	96.99
PRK15430	296	putative chloramphenical resistance permease RarD;	96.85
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.81
PRK11431	105	multidrug efflux system protein; Provisional	96.81
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.78
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.61
COG2076	106	EmrE Membrane transporters of cations and cationic	96.54
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.47
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	96.29
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	95.96
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	95.64
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.58
KOG2765	416	consensus Predicted membrane protein [Function unk	95.57
KOG3912	372	consensus Predicted integral membrane protein [Gen	95.42
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	95.42
PF13536	113	EmrE: Multidrug resistance efflux transporter	95.3
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	94.99
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	94.91
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	94.8
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	94.78
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	93.24
KOG1580	337	consensus UDP-galactose transporter related protei	93.18
KOG4831	125	consensus Unnamed protein [Function unknown]	92.87
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	92.12
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	91.78
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	91.77
PRK13499	345	rhamnose-proton symporter; Provisional	89.33
COG1742	109	Uncharacterized conserved protein [Function unknow	85.73
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	85.53
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	83.96
PRK02237	109	hypothetical protein; Provisional	83.44
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	82.91
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	81.84
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	81.63
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	80.77

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=100.00  E-value=1.9e-62  Score=463.78  Aligned_cols=299  Identities=49%  Similarity=0.835  Sum_probs=284.4

Q ss_pred             CccchHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccCCCccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhh
Q 020902            3 ISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMITMIVGEIANFAAYAFAPAILVT   82 (320)
Q Consensus         3 ~~~~~~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~w~~G~~l~~~g~~~~~~al~~~p~slv~   82 (320)
                      |-+++++|+.+|++||++++.|.++|||+++|+++++.|++.+.++|+|||+||.|+.++++|+++++.||+++|+++||
T Consensus         1 ~~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~~~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~slv~   80 (300)
T PF05653_consen    1 MNTDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGGRSYLRRPLWWIGLLLMVLGEILNFVALGFAPASLVA   80 (300)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHhhHHHHHHHHHHhcchHHHHHHHHhhhHHHHH
Confidence            56789999999999999999999999999999887655554456799999999999999999999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCcccCCHHHHHHHhcCchhHHHHHHHHHHHHHHH
Q 020902           83 PLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLI  162 (320)
Q Consensus        83 pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~~~~t~~el~~~~~~~~fl~~~~~~~~~~~~l~  162 (320)
                      |++++++++|++++++++|||++++|+.|+++++.|.++++.++|++++.+|.+|+++++++|.|+.|+++..++...++
T Consensus        81 Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~y~~~~~~~~~~L~  160 (300)
T PF05653_consen   81 PLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLVYFILVLVLILILI  160 (300)
T ss_pred             HHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceehhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998888777777


Q ss_pred             HhhcccCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHhHhhcccCce
Q 020902          163 FKFVPTHGNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTA  242 (320)
Q Consensus       163 ~~~~~r~~~~~~~~~~~~~gllg~~s~l~~K~v~~~l~~~~~g~~~~~~~~~yl~~~~~v~~~l~Q~~~ln~aL~~~~a~  242 (320)
                      ++..+|+|+++.+.|.++|+++|+++++++|++++.++++++|++|+.+|.+|++++.++.+++.|++|+|+||++||++
T Consensus       161 ~~~~~r~g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~  240 (300)
T PF05653_consen  161 FFIKPRYGRRNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTS  240 (300)
T ss_pred             HhhcchhcccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccce
Confidence            77888889999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             eechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 020902          243 VISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDS  301 (320)
Q Consensus       243 ~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~~~~~  301 (320)
                      .++|++|++||++++++|+++|+|+.+++++++.++.+|+++++.||++|+++||.+++
T Consensus       241 ~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~~~  299 (300)
T PF05653_consen  241 LVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKEIS  299 (300)
T ss_pred             EEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchhcc
Confidence            99999999999999999999999999999999999999999999999999999998764

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=4.3e-62  Score=452.64  Aligned_cols=303  Identities=66%  Similarity=1.117  Sum_probs=293.2

Q ss_pred             CCccchHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccCCCccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhh
Q 020902            2 GISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMITMIVGEIANFAAYAFAPAILV   81 (320)
Q Consensus         2 ~~~~~~~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~w~~G~~l~~~g~~~~~~al~~~p~slv   81 (320)
                      .|++++++|+++|+.|+++++.+.++|||+++|....+.|++.+..+|++.|.||.|++.|.+|+++|+.||+|+|+++|
T Consensus        14 ~~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~ra~~gg~~yl~~~~Ww~G~ltm~vGei~NFaAYaFAPasLV   93 (335)
T KOG2922|consen   14 RMSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLRAGEGGYGYLKEPLWWAGMLTMIVGEIANFAAYAFAPASLV   93 (335)
T ss_pred             hhccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhcccccCCCcchhhhHHHHHHHHHHHHHhHhhHHHHhhchHhhh
Confidence            58999999999999999999999999999999988877777777889999999999999999999999999999999999


Q ss_pred             hcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCcccCCHHHHHHHhcCchhHHHHHHHHHHHHHH
Q 020902           82 TPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVL  161 (320)
Q Consensus        82 ~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~~~~t~~el~~~~~~~~fl~~~~~~~~~~~~l  161 (320)
                      +||+++++++++++++++||||++..+.+|+.++++|.++++.++|++++..|++|+++++++|.|+.|+.+.+++.+++
T Consensus        94 tPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~~~il  173 (335)
T KOG2922|consen   94 TPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILIVLIL  173 (335)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999988888


Q ss_pred             HHhhcccCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHhHhhcccCc
Q 020902          162 IFKFVPTHGNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNT  241 (320)
Q Consensus       162 ~~~~~~r~~~~~~~~~~~~~gllg~~s~l~~K~v~~~l~~~~~g~~~~~~~~~yl~~~~~v~~~l~Q~~~ln~aL~~~~a  241 (320)
                      ++++.||+|++++++|..+|+++|++|+++.|+++++++++++|.+|+.+|++|.++..++.|+..|+.|+||||+.||+
T Consensus       174 ~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fnt  253 (335)
T KOG2922|consen  174 IFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNT  253 (335)
T ss_pred             heeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 020902          242 AVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDSPSS  304 (320)
Q Consensus       242 ~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~~~~~~~~  304 (320)
                      +++.|++|++||+.++++|.++|+||++.+..+..++++|+..++.|+++|.+.||.+++-++
T Consensus       254 slV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~~~~s  316 (335)
T KOG2922|consen  254 SIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEISLAS  316 (335)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccccccccc
Confidence            999999999999999999999999999999999999999999999999999999998865444

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.29  E-value=6.9e-10  Score=103.90  Aligned_cols=254  Identities=19%  Similarity=0.176  Sum_probs=145.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhccCC-C-----------C----ccCCCccccccchhH---HHHHHHHHHHHHHHH
Q 020902           10 GFVLAVSSSIFIGSSFIIKKKGLKKAGTT-G-----------T----RAGSGGYSYLYEPWW---WAGMITMIVGEIANF   70 (320)
Q Consensus        10 Gv~lal~~a~~~a~g~vlqk~~~~~~~~~-~-----------~----~~~~~~~~~~~~p~w---~~G~~l~~~g~~~~~   70 (320)
                      ...+.+.++++.+..+.+.|+...+++.- .           +    +.....++..++..|   ..+.........+..
T Consensus         2 ~~~~~~~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (281)
T TIGR03340         2 ALTLVVFSALMHAGWNLMAKSHADKEPDFLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLA   81 (281)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence            35788999999999999999765543321 0           0    000000111112222   122333456677888


Q ss_pred             HHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCcccCCHHHHHHHhcCchhHHH
Q 020902           71 AAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPGFLVY  150 (320)
Q Consensus        71 ~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~~~~t~~el~~~~~~~~fl~~  150 (320)
                      .++...|.+.++|+...+.+++.+++++++|||+++++|.|..++..|+.++..  ++.++ .+          +.-..+
T Consensus        82 ~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~--~~~~~-~~----------~~g~~~  148 (281)
T TIGR03340        82 QAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL--SRFAQ-HR----------RKAYAW  148 (281)
T ss_pred             HHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc--ccccc-cc----------hhHHHH
Confidence            899999999999999999999999999999999999999999999999887643  22211 11          111112


Q ss_pred             HHHHHHHHHHHHHhh-cccCCCc-h----HHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCccchh-hHHHHHHHHHHH
Q 020902          151 GGIVLVVVGVLIFKF-VPTHGNS-H----LIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVY-YQTWIFTVVVIF  223 (320)
Q Consensus       151 ~~~~~~~~~~l~~~~-~~r~~~~-~----~~~~~~~~gllg~~s~l~~K~v~~~l~~~~~g~~~~~~-~~~yl~~~~~v~  223 (320)
                      .....+.  ...+.. .+|..++ +    ...+.....++++.-..    .....+   ++...... +..+..+.....
T Consensus       149 ~l~aal~--~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~  219 (281)
T TIGR03340       149 ALAAALG--TAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFL----LLYLKR---HGRSMFPYARQILPSATLGGL  219 (281)
T ss_pred             HHHHHHH--HHHhhhhccccccchhcccccHHHHHHHHHHHHHHHH----HHHHHH---hccchhhhHHHHHHHHHHHHH
Confidence            1211111  111222 2222111 1    11111111111111000    000000   11111112 222222333333


Q ss_pred             HHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhh
Q 020902          224 TCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLL  292 (320)
Q Consensus       224 ~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lL  292 (320)
                      .........++++++.|++.+.+..+. .++++++.|..+++|..+.      ....|..+++.|++++
T Consensus       220 ~s~l~~~l~~~al~~~~a~~~~~~~~l-~pv~a~l~g~~~lgE~~~~------~~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       220 MIGGAYALVLWAMTRLPVATVVALRNT-SIVFAVVLGIWFLNERWYL------TRLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHHHHHHHhhCCceEEEeeccc-HHHHHHHHHHHHhCCCccH------HHHHHHHHHHHhHHhC
Confidence            344455677899999999999988776 5899999999999998653      3456777788888764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=99.23  E-value=4.3e-11  Score=100.16  Aligned_cols=116  Identities=16%  Similarity=0.162  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccC-CCccccccch--hHHHHHHHHHHHHHHHHHHHhhcchhhhhcch
Q 020902            9 HGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAG-SGGYSYLYEP--WWWAGMITMIVGEIANFAAYAFAPAILVTPLG   85 (320)
Q Consensus         9 iGv~lal~~a~~~a~g~vlqk~~~~~~~~~~~~~~-~~~~~~~~~p--~w~~G~~l~~~g~~~~~~al~~~p~slv~pl~   85 (320)
                      +|.++.+.+.++.+.||.+.|+|+++.++.+.... ........+|  .-+.|+.++++++.+|..+++..|++...|+.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~~~~~~~~~~p~~~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~   81 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDFIAALLAFGLALRAVLLGLAGYALSMLCWLKALRYLPLSRAYPLL   81 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence            36788899999999999999999888664221100 0011234567  77899999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHH--HhcccccccchhhHHHHhhhheeeEE
Q 020902           86 ALSIIFSAVLAHF--ILREKLHIFGMLGCALCVVGSVSIVL  124 (320)
Q Consensus        86 ~~~lv~~~~la~~--~l~e~~~~~~~~g~~li~~G~~~~~~  124 (320)
                      +..+++..+.+..  ++||++|.++++|+++|+.|+.++..
T Consensus        82 sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         82 SLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            9999888888885  89999999999999999999988754

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.11  E-value=5.7e-08  Score=93.52  Aligned_cols=275  Identities=17%  Similarity=0.191  Sum_probs=150.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhccCC------------C----CccC-CCccccccchhHHHHH--HHHHHHHHH
Q 020902            8 VHGFVLAVSSSIFIGSSFIIKKKGLKKAGTT------------G----TRAG-SGGYSYLYEPWWWAGM--ITMIVGEIA   68 (320)
Q Consensus         8 ~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~------------~----~~~~-~~~~~~~~~p~w~~G~--~l~~~g~~~   68 (320)
                      .+|=++|++-+......+-+.+++....-..            .    .|.+ ....+..++|+|.-=+  ++++.+.-+
T Consensus        16 ~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~   95 (334)
T PF06027_consen   16 LLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYL   95 (334)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHH
Confidence            4566666666666666666666643311000            0    0111 1223445566664333  347889999


Q ss_pred             HHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCcccC-CHHHHHHHhcCchh
Q 020902           69 NFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIH-SVKELWHLATQPGF  147 (320)
Q Consensus        69 ~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~~~~-t~~el~~~~~~~~f  147 (320)
                      ...||.+.+++-+|=+.+.+++++++++.++||||.++.+++|+++++.|+++++......++.. +.+       ++ .
T Consensus        96 ~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~-------~~-i  167 (334)
T PF06027_consen   96 VVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGS-------NP-I  167 (334)
T ss_pred             HHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCC-------cc-c
Confidence            99999999999999999999999999999999999999999999999999888766532221111 111       11 1


Q ss_pred             HHHHHHHHHHHHHHHHhh-ccc-CCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCccc-hhhHHHHHHHHHHHH
Q 020902          148 LVYGGIVLVVVGVLIFKF-VPT-HGNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQF-VYYQTWIFTVVVIFT  224 (320)
Q Consensus       148 l~~~~~~~~~~~~l~~~~-~~r-~~~~~~~~~~~~~gllg~~s~l~~K~v~~~l~~~~~g~~~~-~~~~~yl~~~~~v~~  224 (320)
                      +.=+.+.....+-..+-+ .++ -++.....+.+--|++|..-.. .....  ++  .++...+ -++....+.+....+
T Consensus       168 ~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~-iq~~i--le--~~~i~~~~w~~~~~~~~v~~~~~  242 (334)
T PF06027_consen  168 LGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISG-IQLAI--LE--RSGIESIHWTSQVIGLLVGYALC  242 (334)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHH-HHHHh--ee--hhhhhccCCChhhHHHHHHHHHH
Confidence            100111111111111111 111 1122233444444444432111 11111  11  0111111 123333333333222


Q ss_pred             HHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 020902          225 CLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDSP  302 (320)
Q Consensus       225 ~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~~~~~~  302 (320)
                      ...=-....-.++..+|+.+.- ---..+.-+++.|+.+|+|..+      ..+..|+++++.|.++....+++.+|+
T Consensus       243 lf~~y~l~p~~l~~ssAt~~nL-sLLTsd~~ali~~i~~f~~~~~------~ly~~af~lIiiG~vvy~~~~~~~~~~  313 (334)
T PF06027_consen  243 LFLFYSLVPIVLRMSSATFFNL-SLLTSDFYALIIDIFFFGYKFS------WLYILAFALIIIGFVVYNLAESPEEEA  313 (334)
T ss_pred             HHHHHHHHHHHHHhCccceeeh-HHHHhhHHHHHHHHHhcCcccc------HHHHHHHHHHHHHhheEEccCCccccc
Confidence            2222223355677777764443 3344455688999999998642      247788899999999987665544433

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.98  E-value=1.1e-07  Score=89.94  Aligned_cols=260  Identities=15%  Similarity=0.165  Sum_probs=140.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccCC---CCccC---CC---ccccccch-hHHH--HHHHHHHHHHHHHHHHhh-cch
Q 020902           12 VLAVSSSIFIGSSFIIKKKGLKKAGTT---GTRAG---SG---GYSYLYEP-WWWA--GMITMIVGEIANFAAYAF-APA   78 (320)
Q Consensus        12 ~lal~~a~~~a~g~vlqk~~~~~~~~~---~~~~~---~~---~~~~~~~p-~w~~--G~~l~~~g~~~~~~al~~-~p~   78 (320)
                      ++++.++++-+.....-|.+..+.+..   ..|-.   ..   ....-|++ +.+.  |+........+.+.++.. .|.
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a   86 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFGQFAFLFCAINFGMPA   86 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence            456777888888888888765433211   01100   00   00000111 1122  222223333455566666 577


Q ss_pred             hhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCcccCCHHHHHHHhcCchhHHHHHHHHHHH
Q 020902           79 ILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVV  158 (320)
Q Consensus        79 slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~~~~t~~el~~~~~~~~fl~~~~~~~~~~  158 (320)
                      +...-+..+.-+++.+++++++|||+++++++|.++...|+.++... ..++...+          ..-..+.....+..
T Consensus        87 ~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~-~~~~~~~~----------~~G~~l~l~aal~~  155 (299)
T PRK11453         87 GLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED-SLNGQHVA----------MLGFMLTLAAAFSW  155 (299)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc-cCCCcchh----------HHHHHHHHHHHHHH
Confidence            88888888888999999999999999999999999999998876531 11111111          00111111111111


Q ss_pred             HHHHHhhcccCCC----chHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCc------cchhhHHHHHHH-HHHHHHHH
Q 020902          159 GVLIFKFVPTHGN----SHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHN------QFVYYQTWIFTV-VVIFTCLL  227 (320)
Q Consensus       159 ~~l~~~~~~r~~~----~~~~~~~~~~gllg~~s~l~~K~v~~~l~~~~~g~~------~~~~~~~yl~~~-~~v~~~l~  227 (320)
                      ..- ....+|..+    .....+......++..-..   ..+. .   .++.+      ...++..|..++ ..+.+...
T Consensus       156 a~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~---~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~  227 (299)
T PRK11453        156 ACG-NIFNKKIMSHSTRPAVMSLVVWSALIPIIPFF---VASL-I---LDGSATMIHSLVTIDMTTILSLMYLAFVATIV  227 (299)
T ss_pred             HHH-HHHHHHHhcccCccchhHHHHHHHHHHHHHHH---HHHH-H---hcCchhhhhhhccCCHHHHHHHHHHHHHHHHH
Confidence            110 112222111    1111122222222211100   0000 0   01110      112334444333 44556677


Q ss_pred             HHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCC
Q 020902          228 QINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKD  297 (320)
Q Consensus       228 Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~  297 (320)
                      +....++++++.++..+.++ ....|+++++.|.+++||....      ....|..++++|+++....+.
T Consensus       228 ~~~l~~~~l~~~~a~~~s~~-~~l~Pv~a~~~~~l~lgE~~~~------~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        228 GYGIWGTLLGRYETWRVAPL-SLLVPVVGLASAALLLDERLTG------LQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHhCCHHHHHHH-HHHHHHHHHHHHHHHhCCCccH------HHHHHHHHHHHHHHHHhcchh
Confidence            77888999999998877764 5688999999999999998652      245777888888887665443

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.95  E-value=5e-09  Score=85.47  Aligned_cols=103  Identities=14%  Similarity=0.159  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccCCCCccCCCccccccchhHHHHH--HHHHHHHHHHHHHHhhcchhhhhcchhhHH
Q 020902           12 VLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGM--ITMIVGEIANFAAYAFAPAILVTPLGALSI   89 (320)
Q Consensus        12 ~lal~~a~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~w~~G~--~l~~~g~~~~~~al~~~p~slv~pl~~~~l   89 (320)
                      +.-+++.++-..|+.+.|++.++.+..         +...++..+.+.  ..+.+++.++..+++..|++...|+.++++
T Consensus         4 ~~l~~ai~~ev~g~~~lK~s~~~~~~~---------~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~   74 (111)
T PRK15051          4 LTLVFASLLSVAGQLCQKQATRPVAIG---------KRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNF   74 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCcc---------hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHH
Confidence            345667778888999999985433211         011123334444  557889999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccccccchhhHHHHhhhheeeE
Q 020902           90 IFSAVLAHFILREKLHIFGMLGCALCVVGSVSIV  123 (320)
Q Consensus        90 v~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~  123 (320)
                      +++.+++++++|||++.++++|+.+++.|++++.
T Consensus        75 v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         75 VWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999987664

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.93  E-value=1.7e-07  Score=88.57  Aligned_cols=235  Identities=10%  Similarity=0.046  Sum_probs=134.8

Q ss_pred             CCccchHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCC---Cc--------------cC--CCccccccchhH----HHH
Q 020902            2 GISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTG---TR--------------AG--SGGYSYLYEPWW----WAG   58 (320)
Q Consensus         2 ~~~~~~~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~~---~~--------------~~--~~~~~~~~~p~w----~~G   58 (320)
                      -|+ +...|.++++.++++.+.....-|.. .+.+...   .|              .+  ...++..+++++    ..|
T Consensus         2 ~~~-~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (296)
T PRK15430          2 DAK-QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVS   79 (296)
T ss_pred             Cch-hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHH
Confidence            344 66689999999999998888888753 2211100   00              00  000001122332    245


Q ss_pred             HHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCcccCCHHHH
Q 020902           59 MITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKEL  138 (320)
Q Consensus        59 ~~l~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~~~~t~~el  138 (320)
                      .....+...+.+.++...|.+...-+....-++..+++++++|||+++++|.|.++...|++++..  +.++ .      
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~--~~~~-~------  150 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW--TFGS-L------  150 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH--HcCC-c------
Confidence            555677888999999999999999999999999999999999999999999999999999887642  2111 0      


Q ss_pred             HHHhcCchhHHHHHHHHHHHHHHHHh-hcccCCCch-H-HHHHH-HHHhhhHHHHHHHHHHHHHHHHHhcCCcc--chhh
Q 020902          139 WHLATQPGFLVYGGIVLVVVGVLIFK-FVPTHGNSH-L-IVYVG-ICSAMGSITVMSVKALGIALKLSFSGHNQ--FVYY  212 (320)
Q Consensus       139 ~~~~~~~~fl~~~~~~~~~~~~l~~~-~~~r~~~~~-~-~~~~~-~~gllg~~s~l~~K~v~~~l~~~~~g~~~--~~~~  212 (320)
                            +   .+....  ......+. ..+|..+++ . ..... ....++...         .+.....+...  ...+
T Consensus       151 ------~---~~~l~a--a~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~  210 (296)
T PRK15430        151 ------P---IIALGL--AFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIY---------LFAIADSSTSHMGQNPM  210 (296)
T ss_pred             ------c---HHHHHH--HHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHH---------HHHHccCCcccccCCcH
Confidence                  0   011111  11111122 223322111 1 11110 000111000         00000111111  1112


Q ss_pred             HHHHHHH-HHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCC
Q 020902          213 QTWIFTV-VVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDS  269 (320)
Q Consensus       213 ~~yl~~~-~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~  269 (320)
                      ..+.... ..+.+.+ -..+.++++++.|++.+.+.. -..++.+++.|..+++|..+
T Consensus       211 ~~~~~~~~~g~~t~i-~~~~~~~a~~~~~a~~~s~~~-~l~Pv~a~~~g~l~l~E~~~  266 (296)
T PRK15430        211 SLNLLLIAAGIVTTV-PLLCFTAAATRLRLSTLGFFQ-YIGPTLMFLLAVTFYGEKPG  266 (296)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHhcCCHHHHHHHH-HHHHHHHHHHHHHHHcCCCC
Confidence            2222222 2333444 445889999999988666654 57889999999999999865

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.90  E-value=7.9e-07  Score=84.04  Aligned_cols=222  Identities=9%  Similarity=0.117  Sum_probs=138.5

Q ss_pred             chhHHHHHHH---HHHHHHHHHHHHhhcchhhhhcchh-hHHHHHHHHHHHHhcccccccc----hhhHHHHhhhheeeE
Q 020902           52 EPWWWAGMIT---MIVGEIANFAAYAFAPAILVTPLGA-LSIIFSAVLAHFILREKLHIFG----MLGCALCVVGSVSIV  123 (320)
Q Consensus        52 ~p~w~~G~~l---~~~g~~~~~~al~~~p~slv~pl~~-~~lv~~~~la~~~l~e~~~~~~----~~g~~li~~G~~~~~  123 (320)
                      ...|..|+..   ...|.+..+.|.+...+++..|+.. ..++++.+.+.+++|||.++++    ++|.++++.|+.++.
T Consensus        56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~  135 (290)
T TIGR00776        56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS  135 (290)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence            3445557765   7889999999999999999999999 9999999999999999999999    899999999988875


Q ss_pred             EecCCCcccCCHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhccc---CCCchHHHHHHHHHhh-hHHHHHHHHHHHHHH
Q 020902          124 LHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPT---HGNSHLIVYVGICSAM-GSITVMSVKALGIAL  199 (320)
Q Consensus       124 ~~~~~~~~~~t~~el~~~~~~~~fl~~~~~~~~~~~~l~~~~~~r---~~~~~~~~~~~~~gll-g~~s~l~~K~v~~~l  199 (320)
                      ...+++.+   .+|.   ...+.-+.+..+..+..  ..+..-+|   ++.... .+.-..|.+ ++.... ..-   . 
T Consensus       136 ~~~~~~~~---~~~~---~~~~~Gi~~~l~sg~~y--~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~-~~~---~-  201 (290)
T TIGR00776       136 RSKDKSAG---IKSE---FNFKKGILLLLMSTIGY--LVYVVVAKAFGVDGLSV-LLPQAIGMVIGGIIFN-LGH---I-  201 (290)
T ss_pred             eccccccc---cccc---cchhhHHHHHHHHHHHH--HHHHHHHHHcCCCccee-hhHHHHHHHHHHHHHH-HHH---h-
Confidence            54322211   0010   00122333333222211  11222222   111111 111222322 322211 111   0 


Q ss_pred             HHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHH
Q 020902          200 KLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTEL  279 (320)
Q Consensus       200 ~~~~~g~~~~~~~~~yl~~~~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~  279 (320)
                      +   .  ..+.....|......+.. ..+..+...++++.......+.....+++++.+.|+.+++|..+  +.++....
T Consensus       202 ~---~--~~~~~~~~~~~~~~Gi~~-~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~--~~~~~~~~  273 (290)
T TIGR00776       202 L---A--KPLKKYAILLNILPGLMW-GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKT--KREMIAIS  273 (290)
T ss_pred             c---c--cchHHHHHHHHHHHHHHH-HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCC--cceeehhH
Confidence            1   1  112222333333333333 55666667788845445567777778899999999999999875  66888899


Q ss_pred             HHHHHHHHHHhhhccC
Q 020902          280 CGFVTILSGTFLLHKT  295 (320)
Q Consensus       280 ~G~~l~i~Gv~lLs~~  295 (320)
                      +|.++++.|+++++-.
T Consensus       274 iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       274 VGIILIIIAANILGIG  289 (290)
T ss_pred             HHHHHHHHHHHHHhcc
Confidence            9999999999988654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.89  E-value=3.9e-07  Score=83.46  Aligned_cols=204  Identities=17%  Similarity=0.164  Sum_probs=119.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCcccCCH
Q 020902           56 WAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSV  135 (320)
Q Consensus        56 ~~G~~l~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~~~~t~  135 (320)
                      ..|.....+...+.+.++...|.+...++..+.-+++.+++.+++|||++++++.|+.+.+.|+.++...+  +.+. + 
T Consensus        51 ~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~--~~~~-~-  126 (260)
T TIGR00950        51 LLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG--NLSI-N-  126 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC--cccc-c-
Confidence            45556677888899999999999999999999999999999999999999999999999999988775322  1111 1 


Q ss_pred             HHHHHHhcCchhHHHHHHHHHHHHHHHHhhccc----CCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCccchh
Q 020902          136 KELWHLATQPGFLVYGGIVLVVVGVLIFKFVPT----HGNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVY  211 (320)
Q Consensus       136 ~el~~~~~~~~fl~~~~~~~~~~~~l~~~~~~r----~~~~~~~~~~~~~gllg~~s~l~~K~v~~~l~~~~~g~~~~~~  211 (320)
                               ..-..+.....+....- ....++    .+......+. .....++.. +..-.       ...+.....+
T Consensus       127 ---------~~G~~~~l~a~~~~a~~-~~~~k~~~~~~~~~~~~~~~-~~~~~~~~~-l~~~~-------~~~~~~~~~~  187 (260)
T TIGR00950       127 ---------PAGLLLGLGSGISFALG-TVLYKRLVKKEGPELLQFTG-WVLLLGALL-LLPFA-------WFLGPNPQAL  187 (260)
T ss_pred             ---------HHHHHHHHHHHHHHHHH-HHHHhHHhhcCCchHHHHHH-HHHHHHHHH-HHHHH-------HhcCCCCCcc
Confidence                     11111111111111110 111222    1111112221 111112111 10000       0112111123


Q ss_pred             hHHHHHHH-HHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHH
Q 020902          212 YQTWIFTV-VVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGT  289 (320)
Q Consensus       212 ~~~yl~~~-~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv  289 (320)
                      +..|..+. ..+.+........++++++.+++.+..+. ...++.+.+.+.++++|..+  +.    ...|..+++.|+
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~-~~~pv~~~ll~~~~~~E~~~--~~----~~~G~~li~~g~  259 (260)
T TIGR00950       188 SLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILA-LAEPLVALLLGLLILGETLS--LP----QLIGGALIIAAV  259 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH-HHHHHHHHHHHHHHhCCCCC--HH----HHHHHHHHHHhc
Confidence            44443222 33333334445558899998887666665 48889999999999999654  33    445666666664

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.88  E-value=3.4e-07  Score=89.21  Aligned_cols=221  Identities=11%  Similarity=0.145  Sum_probs=116.9

Q ss_pred             HHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHH------hcccccccchhhHHHHhhhheeeEEecCCCc------cc
Q 020902           65 GEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFI------LREKLHIFGMLGCALCVVGSVSIVLHAPHER------TI  132 (320)
Q Consensus        65 g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~------l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~------~~  132 (320)
                      ...+...++.+.|.+...-+..+.-+++.++++++      +|||+++++++|+++...|+.++...+.+..      ..
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~  170 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY  170 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence            33467788999999999999999999999999999      6999999999999999999876643221100      00


Q ss_pred             CCHHHHH--HHhcCchhHHHHHHHHH-HHHHHHHh-hcccCCCc--hHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCC
Q 020902          133 HSVKELW--HLATQPGFLVYGGIVLV-VVGVLIFK-FVPTHGNS--HLIVYVGICSAMGSITVMSVKALGIALKLSFSGH  206 (320)
Q Consensus       133 ~t~~el~--~~~~~~~fl~~~~~~~~-~~~~l~~~-~~~r~~~~--~~~~~~~~~gllg~~s~l~~K~v~~~l~~~~~g~  206 (320)
                      .+..+..  ....+.....-...... .+...++. ..+|..++  ....+......+++.-...   .+. ..+..+..
T Consensus       171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~---~~l-~~~~~~~~  246 (358)
T PLN00411        171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSM---IGL-VVEKNNPS  246 (358)
T ss_pred             ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHH---HHH-HHccCCcc
Confidence            0000000  00000111100011111 11111111 12221111  1112222222222221111   111 11000000


Q ss_pred             ccch--hhHHHHHHHHHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHH
Q 020902          207 NQFV--YYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVT  284 (320)
Q Consensus       207 ~~~~--~~~~yl~~~~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l  284 (320)
                      ....  ++..+.++...+.+. ....+.|+++++-+++.+ ..+.-..|+++++.|.++++|....      ..++|.++
T Consensus       247 ~~~~~~~~~~~~i~y~~i~t~-lay~lw~~~v~~~ga~~a-s~~~~L~PV~a~llg~l~LgE~lt~------~~~iG~~L  318 (358)
T PLN00411        247 VWIIHFDITLITIVTMAIITS-VYYVIHSWTVRHKGPLYL-AIFKPLSILIAVVMGAIFLNDSLYL------GCLIGGIL  318 (358)
T ss_pred             cceeccchHHHHHHHHHHHHH-HHHHHHHHHHhccCchHH-HHHHhHHHHHHHHHHHHHhCCCCcH------HHHHHHHH
Confidence            1111  111222222223333 344467999999988744 4556688999999999999997653      24578888


Q ss_pred             HHHHHhhhccCCC
Q 020902          285 ILSGTFLLHKTKD  297 (320)
Q Consensus       285 ~i~Gv~lLs~~~~  297 (320)
                      ++.|+.+..+.+.
T Consensus       319 Il~Gv~l~~~~~~  331 (358)
T PLN00411        319 ITLGFYAVMWGKA  331 (358)
T ss_pred             HHHHHHHHHhhhh
Confidence            8899888765433

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.81  E-value=5.2e-07  Score=85.02  Aligned_cols=213  Identities=11%  Similarity=0.042  Sum_probs=122.3

Q ss_pred             HHHHHHHHHHHHHHHHH-hhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCcccCCH
Q 020902           57 AGMITMIVGEIANFAAY-AFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSV  135 (320)
Q Consensus        57 ~G~~l~~~g~~~~~~al-~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~~~~t~  135 (320)
                      .|......+..+...+. ...|.+...-+..+.-+++.+++.+ +|||++++++.|.++...|+.++..  +++.+....
T Consensus        74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~--~~~~~~~~~  150 (292)
T PRK11272         74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS--GGNLSGNPW  150 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc--CcccccchH
Confidence            44444445566667777 8889888899999999999999975 7999999999999999999876532  211111011


Q ss_pred             HHHHHHhcCchhHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCccchhhHHH
Q 020902          136 KELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTW  215 (320)
Q Consensus       136 ~el~~~~~~~~fl~~~~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~gllg~~s~l~~K~v~~~l~~~~~g~~~~~~~~~y  215 (320)
                      .+           .+.....+.-... ....+|..+++........-..++....   .... ..  .+......++..|
T Consensus       151 G~-----------l~~l~a~~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~--~~~~~~~~~~~~~  212 (292)
T PRK11272        151 GA-----------ILILIASASWAFG-SVWSSRLPLPVGMMAGAAEMLAAGVVLL---IASL-LS--GERLTALPTLSGF  212 (292)
T ss_pred             HH-----------HHHHHHHHHHHHH-HHHHHhcCCCcchHHHHHHHHHHHHHHH---HHHH-Hc--CCcccccCCHHHH
Confidence            11           1111111111110 1123333222221111111111211110   0000 10  0111122234444


Q ss_pred             HHHH-HHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhcc
Q 020902          216 IFTV-VVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHK  294 (320)
Q Consensus       216 l~~~-~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~  294 (320)
                      ..+. ..+.+........+.++++.+++.+... ...+++.+.+.|.++++|...  +    ....|..+++.|++++++
T Consensus       213 ~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~-~~l~Pi~a~i~~~~~l~E~~t--~----~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        213 LALGYLAVFGSIIAISAYMYLLRNVRPALATSY-AYVNPVVAVLLGTGLGGETLS--P----IEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH-HHHHHHHHHHHHHHHcCCCCc--H----HHHHHHHHHHHHHHHHHH
Confidence            4333 3333445566677889999987755555 678999999999999999744  3    246788889999999876


Q ss_pred             CCC
Q 020902          295 TKD  297 (320)
Q Consensus       295 ~~~  297 (320)
                      ++.
T Consensus       286 ~~~  288 (292)
T PRK11272        286 GKY  288 (292)
T ss_pred             HHh
Confidence            544

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.78  E-value=4.8e-06  Score=78.61  Aligned_cols=210  Identities=12%  Similarity=0.042  Sum_probs=110.7

Q ss_pred             HHHHHHHHHHHHhh----cchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCcccCCHHH
Q 020902           62 MIVGEIANFAAYAF----APAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKE  137 (320)
Q Consensus        62 ~~~g~~~~~~al~~----~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~~~~t~~e  137 (320)
                      +.....+.+.++..    .|.+...-+..+.-+++.++++.++|||++++++.|+++...|++++...++  +  .+.++
T Consensus        71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~--~--~~~~~  146 (295)
T PRK11689         71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDN--G--LSLAE  146 (295)
T ss_pred             HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCc--c--chhhh
Confidence            33444444455543    3555556677788899999999999999999999999999999987754211  1  01111


Q ss_pred             HHHHh-cCchhHHHHHHHHHHHHHHHH-hhcccCCCc-hHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCccchhhHH
Q 020902          138 LWHLA-TQPGFLVYGGIVLVVVGVLIF-KFVPTHGNS-HLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQT  214 (320)
Q Consensus       138 l~~~~-~~~~fl~~~~~~~~~~~~l~~-~~~~r~~~~-~~~~~~~~~gllg~~s~l~~K~v~~~l~~~~~g~~~~~~~~~  214 (320)
                      ++... .++.-..+.....+  ....+ ...+|..++ ++..+..   ..++.. +.   ......   +....-.++..
T Consensus       147 ~~~~~~~~~~G~~~~l~aa~--~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~-l~---~~~~~~---~~~~~~~~~~~  214 (295)
T PRK11689        147 LINNIASNPLSYGLAFIGAF--IWAAYCNVTRKYARGKNGITLFF---ILTALA-LW---IKYFLS---PQPAMVFSLPA  214 (295)
T ss_pred             hhhccccChHHHHHHHHHHH--HHHHHHHHHhhccCCCCchhHHH---HHHHHH-HH---HHHHHh---cCccccCCHHH
Confidence            10000 01111111111111  11111 122332211 2221111   111111 10   000111   11111123334


Q ss_pred             HHHHHHHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhcc
Q 020902          215 WIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHK  294 (320)
Q Consensus       215 yl~~~~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~  294 (320)
                      |..+.........-..+.++++++.+++.+.+. .-..|+++++.|.+++||..+.      ....|.++++.|+++.-.
T Consensus       215 ~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~-~~l~Pv~a~i~~~~~lgE~~~~------~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        215 IIKLLLAAAAMGFGYAAWNVGILHGNMTLLATA-SYFTPVLSAALAALLLSTPLSF------SFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHH-HHhHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHhHHHHhh
Confidence            433332222334455666999999998855554 5688999999999999998652      355677778888766543

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.78  E-value=6e-08  Score=80.20  Aligned_cols=113  Identities=23%  Similarity=0.336  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhccCC---CCcc--------------CC-CccccccchhHH---HHHHHHHHHHHHH
Q 020902           11 FVLAVSSSIFIGSSFIIKKKGLKKAGTT---GTRA--------------GS-GGYSYLYEPWWW---AGMITMIVGEIAN   69 (320)
Q Consensus        11 v~lal~~a~~~a~g~vlqk~~~~~~~~~---~~~~--------------~~-~~~~~~~~p~w~---~G~~l~~~g~~~~   69 (320)
                      .+.|+.+|++.++..++-|-|.+..+..   ..|.              +. +...-...+.|.   .+-+.-+++.++.
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Y   84 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLY   84 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHH
Confidence            4678899999999999999987744321   0000              00 000112223332   1224456788899


Q ss_pred             HHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeE
Q 020902           70 FAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIV  123 (320)
Q Consensus        70 ~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~  123 (320)
                      +.|+..++.|.|.|+...+.++..+++..+||||+|..+|+|+.+|+.|++++.
T Consensus        85 f~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          85 FRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999999999999999988764

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=98.71  E-value=2e-08  Score=81.93  Aligned_cols=103  Identities=18%  Similarity=0.201  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHhhhhhccCCCC--ccCCCccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhcch-hhHHHHHHHHH
Q 020902           20 FIGSSFIIKKKGLKKAGTTGT--RAGSGGYSYLYEPWWWAGMITMIVGEIANFAAYAFAPAILVTPLG-ALSIIFSAVLA   96 (320)
Q Consensus        20 ~~a~g~vlqk~~~~~~~~~~~--~~~~~~~~~~~~p~w~~G~~l~~~g~~~~~~al~~~p~slv~pl~-~~~lv~~~~la   96 (320)
                      +-+..+-+.|||.+..++...  +.-.+...+++||++++++.+.-.|++..+..++-+|+|+..|+. +++++++++.+
T Consensus         7 ~WG~Tnpfik~g~~~~~~~~~~~~~~~~~~~Ll~n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g   86 (113)
T PF10639_consen    7 LWGCTNPFIKRGSSGLEKVKASLQLLQEIKFLLLNPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTG   86 (113)
T ss_pred             HhcCchHHHHHHHhhcCCccchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHH
Confidence            344556678887665543211  111234578999999999999999999999999999999999996 99999999999


Q ss_pred             HHHhcccccccchhhHHHHhhhheee
Q 020902           97 HFILREKLHIFGMLGCALCVVGSVSI  122 (320)
Q Consensus        97 ~~~l~e~~~~~~~~g~~li~~G~~~~  122 (320)
                      +++-+|..+++.++|+.+++.|+.+.
T Consensus        87 ~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   87 WLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCcccchhHHHHHHHHHcCeeee
Confidence            77777777888899999999998865

Many members are annotated as potential transmembrane proteins.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.69  E-value=1.9e-06  Score=81.35  Aligned_cols=223  Identities=17%  Similarity=0.132  Sum_probs=122.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCcccCCH
Q 020902           56 WAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSV  135 (320)
Q Consensus        56 ~~G~~l~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~~~~t~  135 (320)
                      ..|+. ..+...++..++.+.+.+..+-+.++..+++++++++++|||++++++.|.++++.|+.+..   ..+.+....
T Consensus        70 ~~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~---~~~~~~~~~  145 (302)
T TIGR00817        70 PVAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS---DTELSFNWA  145 (302)
T ss_pred             HHHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc---CCcccccHH
Confidence            34444 46777889999999999999999999999999999999999999999999999999987542   222111111


Q ss_pred             HHHHHHhcCchhHHHHHHHHHHHHHHHH-hhccc------CCCchHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHhcCCc
Q 020902          136 KELWHLATQPGFLVYGGIVLVVVGVLIF-KFVPT------HGNSHLIVYVGICSAMG-SITVMSVKALGIALKLSFSGHN  207 (320)
Q Consensus       136 ~el~~~~~~~~fl~~~~~~~~~~~~l~~-~~~~r------~~~~~~~~~~~~~gllg-~~s~l~~K~v~~~l~~~~~g~~  207 (320)
                      .+++           .....+.  ...+ ...+|      ....+...|....|.+. ..-............+..+...
T Consensus       146 G~~~-----------~l~a~~~--~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~  212 (302)
T TIGR00817       146 GFLS-----------AMISNIT--FVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAIS  212 (302)
T ss_pred             HHHH-----------HHHHHHH--HHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhc
Confidence            1111           1111111  1111 11222      22223333433222211 0000000000000000000000


Q ss_pred             cchhhHHHHHH-HHHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHH
Q 020902          208 QFVYYQTWIFT-VVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTIL  286 (320)
Q Consensus       208 ~~~~~~~yl~~-~~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i  286 (320)
                      .......|... ....++..........++++.+++... ++....++++++.|..+++|...  +    ...+|..+++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~s-v~~~l~pv~~~~~~~~~lge~lt--~----~~~~G~~lil  285 (302)
T TIGR00817       213 GVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHS-VGNCMKRVVVIVVSILFFGTKIS--P----QQVFGTGIAI  285 (302)
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHH-HHhhhhhhheeeeehhhcCCCCc--h----hHHHHHHHHH
Confidence            00101123222 222222222222334678888776444 44778889999999999999754  2    2457778899


Q ss_pred             HHHhhhccCCCCCCCC
Q 020902          287 SGTFLLHKTKDMGDSP  302 (320)
Q Consensus       287 ~Gv~lLs~~~~~~~~~  302 (320)
                      .|+.+-++.|.++.++
T Consensus       286 ~Gv~l~~~~k~~~~~~  301 (302)
T TIGR00817       286 AGVFLYSRVKAQKPKP  301 (302)
T ss_pred             HHHHHHHHHhccCcCC
Confidence            9999988877655443

specificities overlap.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.68  E-value=2.2e-05  Score=71.99  Aligned_cols=210  Identities=15%  Similarity=0.225  Sum_probs=122.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHH-HHhcccccccchhhHHHHhhhheeeEEecCCCcccCCH
Q 020902           57 AGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAH-FILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSV  135 (320)
Q Consensus        57 ~G~~l~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~-~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~~~~t~  135 (320)
                      .|......+..+.+.++...|.+..+++.....+++.+++. +++|||++++++.|..+...|+.++...+..+....  
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~--  152 (292)
T COG0697          75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILS--  152 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHH--
Confidence            44455677888999999999999999999999999999997 667999999999999999999887755333332210  


Q ss_pred             HHHHHHhcCchhHHHHHHHHHHHHHHHHhh-cccCCCchHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHhcCCccchhhH
Q 020902          136 KELWHLATQPGFLVYGGIVLVVVGVLIFKF-VPTHGNSHLIVYVG-ICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQ  213 (320)
Q Consensus       136 ~el~~~~~~~~fl~~~~~~~~~~~~l~~~~-~~r~~~~~~~~~~~-~~gllg~~s~l~~K~v~~~l~~~~~g~~~~~~~~  213 (320)
                               ..-..+.....+...  .+.. .++..+........ .... .....    ....    .....+....+.
T Consensus       153 ---------~~g~~~~l~a~~~~a--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~----~~~~~~~~~~~~  212 (292)
T COG0697         153 ---------LLGLLLALAAALLWA--LYTALVKRLSRLGPVTLALLLQLL-LALLL----LLLF----FLSGFGAPILSR  212 (292)
T ss_pred             ---------HHHHHHHHHHHHHHH--HHHHHHHHhcCCChHHHHHHHHHH-HHHHH----HHHH----HhccccccCCHH
Confidence                     011111111111111  1111 22111111111110 1111 00000    0000    011111122333


Q ss_pred             HHHHHH-HHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhh
Q 020902          214 TWIFTV-VVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLL  292 (320)
Q Consensus       214 ~yl~~~-~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lL  292 (320)
                      .|.... ..+.......+....++++.+++.+.+.. ...++.+...+..+++|..+  ..    ...|..+++.|+++.
T Consensus       213 ~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~l~~~e~~~--~~----~~~G~~li~~g~~l~  285 (292)
T COG0697         213 AWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLS-LLEPVFAALLGVLLLGEPLS--PA----QLLGAALVVLGVLLA  285 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH-HHHHHHHHHHHHHHhCCCCc--HH----HHHHHHHHHHHHHHH
Confidence            333333 22223324556678899999988777766 67778888899999999765  32    345667888888888


Q ss_pred             ccC
Q 020902          293 HKT  295 (320)
Q Consensus       293 s~~  295 (320)
                      .++
T Consensus       286 ~~~  288 (292)
T COG0697         286 SLR  288 (292)
T ss_pred             hcc
Confidence            766

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.55  E-value=6.5e-05  Score=70.82  Aligned_cols=255  Identities=13%  Similarity=0.061  Sum_probs=136.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhccCCC---Ccc--C--------CCccccccchhH----HHHHHHHHHHHHHHH
Q 020902            8 VHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTG---TRA--G--------SGGYSYLYEPWW----WAGMITMIVGEIANF   70 (320)
Q Consensus         8 ~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~~---~~~--~--------~~~~~~~~~p~w----~~G~~l~~~g~~~~~   70 (320)
                      ..|+.+.+++.++.+.+...-|.+..+.+...   .|-  +        ...+...+++.|    +.|.. +.....+.+
T Consensus        11 ~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~   89 (293)
T PRK10532         11 WLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVS-LGGMNYLFY   89 (293)
T ss_pred             chHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHH-HHHHHHHHH
Confidence            56788999999999999999888765432110   000  0        000011122223    44543 455666788


Q ss_pred             HHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCcccCCHHHHHHHhcCchhHHH
Q 020902           71 AAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPGFLVY  150 (320)
Q Consensus        71 ~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~~~~t~~el~~~~~~~~fl~~  150 (320)
                      .++...|.+...-+....-++..+++    +||.+  ++.+..+...|+.++...+.+.++ .+          +.-..+
T Consensus        90 ~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--~~~~~~i~~~Gv~li~~~~~~~~~-~~----------~~G~ll  152 (293)
T PRK10532         90 LSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--DFVWVVLAVLGLWFLLPLGQDVSH-VD----------LTGAAL  152 (293)
T ss_pred             HHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--HHHHHHHHHHHHheeeecCCCccc-CC----------hHHHHH
Confidence            88999999987777777777776665    35544  455667778888776532221111 11          101111


Q ss_pred             HHHHHHHHHHHHHhh-cccCCCc-hHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCccchhhHHHHH-HHHHHHHHHH
Q 020902          151 GGIVLVVVGVLIFKF-VPTHGNS-HLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIF-TVVVIFTCLL  227 (320)
Q Consensus       151 ~~~~~~~~~~l~~~~-~~r~~~~-~~~~~~~~~gllg~~s~l~~K~v~~~l~~~~~g~~~~~~~~~yl~-~~~~v~~~l~  227 (320)
                      .....+  ....+.. .++..++ .+... ....++++.- +.  ....     ..+.....++..|.. +...+.+...
T Consensus       153 ~l~aa~--~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~-l~--~~~~-----~~~~~~~~~~~~~~~~l~lgv~~t~~  221 (293)
T PRK10532        153 ALGAGA--CWAIYILSGQRAGAEHGPATV-AIGSLIAALI-FV--PIGA-----LQAGEALWHWSILPLGLAVAILSTAL  221 (293)
T ss_pred             HHHHHH--HHHHHHHHHHHHhccCCchHH-HHHHHHHHHH-HH--HHHH-----HccCcccCCHHHHHHHHHHHHHHHHH
Confidence            111111  1111211 2221111 11111 1122222211 11  0110     111112234444433 2345556677


Q ss_pred             HHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCCC
Q 020902          228 QINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDM  298 (320)
Q Consensus       228 Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~~  298 (320)
                      +....|.++++.+++.+.+. ...+++++.+.|.+++||..+  +    ....|..+++.|++..++.+++
T Consensus       222 ~~~l~~~~~~~~~a~~as~~-~~l~Pv~a~l~~~l~lgE~~~--~----~~~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        222 PYSLEMIALTRLPTRTFGTL-MSMEPALAAVSGMIFLGETLT--L----IQWLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             HHHHHHHHHHhcChhHHHHH-HHhHHHHHHHHHHHHhCCCCc--H----HHHHHHHHHHHHHHHHHhcCCC
Confidence            87888999999998765554 568999999999999999754  3    3456777777777777655433

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.46  E-value=6.5e-07  Score=72.75  Aligned_cols=66  Identities=30%  Similarity=0.466  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEE
Q 020902           58 GMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVL  124 (320)
Q Consensus        58 G~~l~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~  124 (320)
                      |......+..+...|+.+.| ..+.++.+++.+++.++++.++|||+++++|.|+.++..|++++..
T Consensus        41 g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~  106 (113)
T PF13536_consen   41 GLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAW  106 (113)
T ss_pred             HHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh
Confidence            44445578899999999999 6999999999999999999999999999999999999999988755

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.35  E-value=6.5e-05  Score=72.88  Aligned_cols=59  Identities=15%  Similarity=0.229  Sum_probs=54.3

Q ss_pred             HHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeE
Q 020902           65 GEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIV  123 (320)
Q Consensus        65 g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~  123 (320)
                      +..+...++...+.+..+-+-+++-+++++++++++|||++++++.++++++.|+.+..
T Consensus       127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            34556689999999999999999999999999999999999999999999999988765

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.31  E-value=0.00045  Score=65.49  Aligned_cols=220  Identities=15%  Similarity=0.205  Sum_probs=125.6

Q ss_pred             HHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCcccCCHHHHH
Q 020902           60 ITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKELW  139 (320)
Q Consensus        60 ~l~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~~~~t~~el~  139 (320)
                      .++.++..++-.|+.+.|.+.-+-+-+...+++++++.+++|+|.+++|+.++++++.|+.+......++++..+.++- 
T Consensus        72 ~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~-  150 (303)
T PF08449_consen   72 FLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSF-  150 (303)
T ss_pred             HHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccc-
Confidence            5566888899999999999999999999999999999999999999999999999999999887765443332221100 


Q ss_pred             HHhcCch-hHHHHHHHHHHHHHH-HH--hhcccCCCc--hHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHhcCCccchhh
Q 020902          140 HLATQPG-FLVYGGIVLVVVGVL-IF--KFVPTHGNS--HLIVYVGICSAMG-SITVMSVKALGIALKLSFSGHNQFVYY  212 (320)
Q Consensus       140 ~~~~~~~-fl~~~~~~~~~~~~l-~~--~~~~r~~~~--~~~~~~~~~gllg-~~s~l~~K~v~~~l~~~~~g~~~~~~~  212 (320)
                          ++. -+.+..+..+.-... .+  +..++++..  ..+.|--.-++.. .......+  .+...+..  .....||
T Consensus       151 ----~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~--~~~~~~~~--~f~~~~p  222 (303)
T PF08449_consen  151 ----SSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLP--TGEFRSAI--RFISAHP  222 (303)
T ss_pred             ----cchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH--hhHhhHHH--HHHHHhH
Confidence                000 111111111111110 00  112223222  2334433333222 11111101  11111100  1224667


Q ss_pred             HHHHHHHHHHH-HHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhh
Q 020902          213 QTWIFTVVVIF-TCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFL  291 (320)
Q Consensus       213 ~~yl~~~~~v~-~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~l  291 (320)
                      ..+..+..... ..+.|. +...-.+++++.. .-+....-...+++.+.++|++  +.++.++    .|..+++.|+.+
T Consensus       223 ~~~~~l~~~s~~~~~g~~-~i~~~~~~~~al~-~t~v~t~Rk~~sillS~~~f~~--~~~~~~~----~G~~lv~~g~~~  294 (303)
T PF08449_consen  223 SVLLYLLLFSLTGALGQF-FIFYLIKKFSALT-TTIVTTLRKFLSILLSVIIFGH--PLSPLQW----IGIVLVFAGIFL  294 (303)
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHhcCchh-hhhHHHHHHHHHHHHHHHhcCC--cCChHHH----HHHHHhHHHHHH
Confidence            66665554433 344454 4456677777664 3444556677889999999997  4555554    455556666665


Q ss_pred             hccCC
Q 020902          292 LHKTK  296 (320)
Q Consensus       292 Ls~~~  296 (320)
                      =+..|
T Consensus       295 ~~~~~  299 (303)
T PF08449_consen  295 YSYAK  299 (303)
T ss_pred             HHHhh
Confidence            44333

; GO: 0055085 transmembrane transport

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.28  E-value=7.6e-06  Score=67.69  Aligned_cols=73  Identities=16%  Similarity=0.184  Sum_probs=65.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcchhhhhcc-hhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecC
Q 020902           55 WWAGMITMIVGEIANFAAYAFAPAILVTPL-GALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAP  127 (320)
Q Consensus        55 w~~G~~l~~~g~~~~~~al~~~p~slv~pl-~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~  127 (320)
                      |+..+.++++++.+...+++..|+++..|+ .+++.+.+.+.+.+++||+++..+++|+.+|+.|++++-..++
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            566677788999999999999999999999 4799999999999999999999999999999999987755443

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=98.28  E-value=5.9e-06  Score=67.32  Aligned_cols=96  Identities=14%  Similarity=0.142  Sum_probs=76.1

Q ss_pred             HHHHHHHHHHHHHHHhhhhhccCCCCccCCCccccccchhHH-HHHHHHHHHHHHHHHHHhhcchhhhhcc-hhhHHHHH
Q 020902           15 VSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWW-AGMITMIVGEIANFAAYAFAPAILVTPL-GALSIIFS   92 (320)
Q Consensus        15 l~~a~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~w~-~G~~l~~~g~~~~~~al~~~p~slv~pl-~~~~lv~~   92 (320)
                      +++.++-..|....|++.                =+++|.|. ..+.++++++.+...|++..|+++..|+ .+++.+.+
T Consensus         8 ~~a~~~Ev~~~~~lK~s~----------------gf~~~~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~   71 (110)
T PRK09541          8 GGAILAEVIGTTLMKFSE----------------GFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLI   71 (110)
T ss_pred             HHHHHHHHHHHHHHHHhc----------------CCCchhHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHH
Confidence            344555666666677651                12355554 4455678888889999999999999999 67999999


Q ss_pred             HHHHHHHhcccccccchhhHHHHhhhheeeEEec
Q 020902           93 AVLAHFILREKLHIFGMLGCALCVVGSVSIVLHA  126 (320)
Q Consensus        93 ~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~  126 (320)
                      .+.+.+++||+++..+++|..+|+.|++++-..+
T Consensus        72 ~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         72 SLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999998875443

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.18  E-value=0.00019  Score=67.15  Aligned_cols=214  Identities=12%  Similarity=0.196  Sum_probs=124.6

Q ss_pred             hhHHHHHH---HHHHHHHHHHHHHhhcchhhhhcch-hhHHHHHHHHHHHHhcccccccchh----hHHHHhhhheeeEE
Q 020902           53 PWWWAGMI---TMIVGEIANFAAYAFAPAILVTPLG-ALSIIFSAVLAHFILREKLHIFGML----GCALCVVGSVSIVL  124 (320)
Q Consensus        53 p~w~~G~~---l~~~g~~~~~~al~~~p~slv~pl~-~~~lv~~~~la~~~l~e~~~~~~~~----g~~li~~G~~~~~~  124 (320)
                      ..|+.+++   +-.+|.+.|+.++....+|...|+. +.+++.|.+.+.+++||--+..+++    +.+++++|+.+...
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            45666664   3578999999999999999999998 8899999999999999998888874    88899999887766


Q ss_pred             ecCCCcccCCHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcccCCCchHH--HHHHHHH-hhhHHHHHHHHHHHHHHHH
Q 020902          125 HAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKFVPTHGNSHLI--VYVGICS-AMGSITVMSVKALGIALKL  201 (320)
Q Consensus       125 ~~~~~~~~~t~~el~~~~~~~~fl~~~~~~~~~~~~l~~~~~~r~~~~~~~--~~~~~~g-llg~~s~l~~K~v~~~l~~  201 (320)
                      ..+++++..+.++..+      -+....+..  +....|..-+|..+-++.  .+.=.-| ++++.--...         
T Consensus       123 ~~~~~~~~~~~~~~~k------gi~~Ll~st--igy~~Y~~~~~~~~~~~~~~~lPqaiGm~i~a~i~~~~---------  185 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKK------GILALLIST--IGYWIYSVIPKAFHVSGWSAFLPQAIGMLIGAFIFNLF---------  185 (269)
T ss_pred             ccccccccccccchhh------HHHHHHHHH--HHHHHHHHHHHhcCCChhHhHHHHHHHHHHHHHHHhhc---------
Confidence            5544443222222221      111111111  222334444554332221  1111122 2221111100         


Q ss_pred             HhcCCccchhhHHHHHHHHHHHHHHHH-HHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHH
Q 020902          202 SFSGHNQFVYYQTWIFTVVVIFTCLLQ-INYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELC  280 (320)
Q Consensus       202 ~~~g~~~~~~~~~yl~~~~~v~~~l~Q-~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~  280 (320)
                        . ++.+.+...|.=+...+.-.+.- .+++...  +--.+..+|+-|.. .+.+.+.|+.+|+|...  ..++.....
T Consensus       186 --~-~~~~~~k~~~~nil~G~~w~ignl~~~is~~--~~G~a~af~lSQ~~-vvIStlgGI~il~E~Kt--~ke~~~~~~  257 (269)
T PF06800_consen  186 --S-KKPFFEKKSWKNILTGLIWGIGNLFYLISAQ--KNGVATAFTLSQLG-VVISTLGGIFILKEKKT--KKEMIYTLI  257 (269)
T ss_pred             --c-cccccccchHHhhHHHHHHHHHHHHHHHhHH--hccchhhhhHHhHH-HHHHHhhhheEEEecCc--hhhHHHHHH
Confidence              0 11222222333222221111111 1122111  22234567777776 67788999999999864  568888899


Q ss_pred             HHHHHHHHHhh
Q 020902          281 GFVTILSGTFL  291 (320)
Q Consensus       281 G~~l~i~Gv~l  291 (320)
                      |+++++.|.++
T Consensus       258 G~~Liv~G~il  268 (269)
T PF06800_consen  258 GLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHhhhc
Confidence            99999888775

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00688 rarD rarD protein

Probab=98.14  E-value=0.00022  Score=65.65  Aligned_cols=62  Identities=13%  Similarity=0.147  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeE
Q 020902           62 MIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIV  123 (320)
Q Consensus        62 ~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~  123 (320)
                      ...+..+.+.++...|.+...-+..+.-+++++++++++|||+++++|+|.++...|++++.
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            55677889999999999999999999999999999999999999999999999999987654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.03  E-value=2.2e-05  Score=74.01  Aligned_cols=122  Identities=16%  Similarity=0.157  Sum_probs=91.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCC---c-----------cCCCccccccch-----hHHHHHHHHHHHHH
Q 020902            7 NVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGT---R-----------AGSGGYSYLYEP-----WWWAGMITMIVGEI   67 (320)
Q Consensus         7 ~~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~~~---~-----------~~~~~~~~~~~p-----~w~~G~~l~~~g~~   67 (320)
                      ..+|.++++.++++++...++.||..++.+....   .           ...+. ....++     .++.|+...+++..
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~  224 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYS  224 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHH
Confidence            3579999999999999999998886443221100   0           00000 011122     23566666778888


Q ss_pred             HHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCC
Q 020902           68 ANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHE  129 (320)
Q Consensus        68 ~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~  129 (320)
                      ++..+++..|.+.+.++..+..+++.+++.+++||+++..+++|.++++.|+.......++|
T Consensus       225 l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~  286 (293)
T PRK10532        225 LEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRRE  286 (293)
T ss_pred             HHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            99999999999999999999999999999999999999999999999999988765544443

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.99  E-value=4.2e-05  Score=60.31  Aligned_cols=85  Identities=15%  Similarity=0.022  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHHHHHHhhhhhccCCCCccCCCccccccchhHHHHHH-HHHHHHHHHHHHHhhcchhhhhcch-hhHHHHH
Q 020902           15 VSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMI-TMIVGEIANFAAYAFAPAILVTPLG-ALSIIFS   92 (320)
Q Consensus        15 l~~a~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~w~~G~~-l~~~g~~~~~~al~~~p~slv~pl~-~~~lv~~   92 (320)
                      +.+.++-..++...|++                +-++++.|..+.. ++.+++.+...|++..|+++..|+- +++.+..
T Consensus         7 ~~a~~~ev~~~~~lK~s----------------~g~~~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~   70 (93)
T PF00893_consen    7 LLAILFEVVGTIALKAS----------------HGFTQLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGV   70 (93)
T ss_dssp             HHHHHHHHHHHHH------------------------------HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH----------------HhhcchhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence            34455666777777773                1223445555554 5888889999999999999999975 5999999


Q ss_pred             HHHHHHHhcccccccchhhHHHH
Q 020902           93 AVLAHFILREKLHIFGMLGCALC  115 (320)
Q Consensus        93 ~~la~~~l~e~~~~~~~~g~~li  115 (320)
                      .+.+.+++||++|..++.|+.+|
T Consensus        71 ~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   71 TLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHhCCCCCHHHHhheeeC
Confidence            99999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.97  E-value=0.00031  Score=68.02  Aligned_cols=288  Identities=13%  Similarity=0.105  Sum_probs=154.0

Q ss_pred             CccchHHHHHHHHHHHHHHHHHHHHHHhhhhhcc-C-----CC-------C---c--cCCCcccccc---chhHHHHHH-
Q 020902            3 ISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAG-T-----TG-------T---R--AGSGGYSYLY---EPWWWAGMI-   60 (320)
Q Consensus         3 ~~~~~~iGv~lal~~a~~~a~g~vlqk~~~~~~~-~-----~~-------~---~--~~~~~~~~~~---~p~w~~G~~-   60 (320)
                      |..+..+|++..+++.++.+.=.+=+||. ++=+ +     ..       +   .  ......++++   ...|..+++ 
T Consensus         1 m~~~~~~G~~~~~i~~~~~GS~~~p~K~~-k~w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~   79 (345)
T PRK13499          1 MSNAIILGIIWHLIGGASSGSFYAPFKKV-KKWSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF   79 (345)
T ss_pred             CCchhHHHHHHHHHHHHHhhccccccccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence            66788999999999999988888888883 2111 0     00       0   0  0001222332   345555553 


Q ss_pred             --HHHHHHHHHHHHHhhcchhhhhcch-hhHHHHHHHHHHHHhcccc---cccc----hhhHHHHhhhheeeEEecCCCc
Q 020902           61 --TMIVGEIANFAAYAFAPAILVTPLG-ALSIIFSAVLAHFILREKL---HIFG----MLGCALCVVGSVSIVLHAPHER  130 (320)
Q Consensus        61 --l~~~g~~~~~~al~~~p~slv~pl~-~~~lv~~~~la~~~l~e~~---~~~~----~~g~~li~~G~~~~~~~~~~~~  130 (320)
                        +-.+|.+.++.+.+...+|+-.|+. +++++++.++...+++|=-   +..+    .+|++++++|+++....+...+
T Consensus        80 G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~  159 (345)
T PRK13499         80 GALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKE  159 (345)
T ss_pred             HHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence              4578999999999999999999996 5778999999999998643   4333    4699999999998876433222


Q ss_pred             ccCCHHHHHHHhcCchhHHHHHHHHHHHHHHHHhh----c---cc----CCCchH-HHHHHHHH-hhhHHHHHHHHHHHH
Q 020902          131 TIHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKF----V---PT----HGNSHL-IVYVGICS-AMGSITVMSVKALGI  197 (320)
Q Consensus       131 ~~~t~~el~~~~~~~~fl~~~~~~~~~~~~l~~~~----~---~r----~~~~~~-~~~~~~~g-llg~~s~l~~K~v~~  197 (320)
                      +..+.||-.+. ....-+...++..+....  +.+    +   ++    .|.... ...-...+ ++|++..-..=+...
T Consensus       160 ~~~~~~~~~~~-~~~KGi~ialisgi~~~~--f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~  236 (345)
T PRK13499        160 RKMGIKKAEEF-NLKKGLILAVMSGIFSAC--FSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIR  236 (345)
T ss_pred             ccccccccccc-chHhHHHHHHHHHHHHHH--HHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            21111100000 001112222222222111  110    0   11    111111 01111222 233332111000110


Q ss_pred             HHH-HHhcCCccchh-----hHHHHHHHHHHHHHHHHHHHHhHhhccc-C--ceeechhHHHHHHHHHHHHHHHHhcccC
Q 020902          198 ALK-LSFSGHNQFVY-----YQTWIFTVVVIFTCLLQINYLNKALDTF-N--TAVISPVYYVMFTTLTIVASIIMFKDWD  268 (320)
Q Consensus       198 ~l~-~~~~g~~~~~~-----~~~yl~~~~~v~~~l~Q~~~ln~aL~~~-~--a~~v~P~~~v~~~~~~i~~G~i~f~E~~  268 (320)
                      .-+ +..+....+..     +.-|++....-..-..|..+.-.+-++- +  +.+..++-+-...+++.+.|+ +++|+.
T Consensus       237 ~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K  315 (345)
T PRK13499        237 LAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWK  315 (345)
T ss_pred             HhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhcc
Confidence            001 00000111221     3445544443333444554443332222 1  122344554555677888888 599999


Q ss_pred             CCChHHHHHHHHHHHHHHHHHhhhccC
Q 020902          269 SQNTSQIVTELCGFVTILSGTFLLHKT  295 (320)
Q Consensus       269 ~~~~~~~~~~~~G~~l~i~Gv~lLs~~  295 (320)
                      ..+..+....++|+++++.|.+++.-.
T Consensus       316 ~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        316 GASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             CCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            988889999999999999999988643

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.93  E-value=0.00012  Score=59.47  Aligned_cols=97  Identities=13%  Similarity=0.034  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccCCCccccccchhHHHHHHH-HHHHHHHHHHHHhhcchhhhhcchh-h
Q 020902           10 GFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMIT-MIVGEIANFAAYAFAPAILVTPLGA-L   87 (320)
Q Consensus        10 Gv~lal~~a~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~w~~G~~l-~~~g~~~~~~al~~~p~slv~pl~~-~   87 (320)
                      ....=+++.++=-.|....|++                +-++||.|.+.... +.+++.+-..|++..|+++..++-+ +
T Consensus         8 ~~~~L~~Ai~~Ev~~t~~Lk~s----------------~gf~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~Gi   71 (109)
T PRK10650          8 HAAWLALAIVLEIVANIFLKFS----------------DGFRRKIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGF   71 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh----------------cCCcchHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHH
Confidence            3344445555555666666654                11346666665544 6677778888899999999999854 8


Q ss_pred             HHHHHHHHHHHHhcccccccchhhHHHHhhhheee
Q 020902           88 SIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSI  122 (320)
Q Consensus        88 ~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~  122 (320)
                      +.+.+.+.+.+++||+++..++.|..+++.|++.+
T Consensus        72 G~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         72 GIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            89999999999999999999999999999998764

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.81  E-value=0.0012  Score=61.06  Aligned_cols=69  Identities=20%  Similarity=0.305  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecC
Q 020902           59 MITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAP  127 (320)
Q Consensus        59 ~~l~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~  127 (320)
                      -.+|.+...+.++++...|.+.-|-+...-++++++++.++||+|+++++|.+..+.+.|++++-....
T Consensus        24 A~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   24 ALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            367999999999999999999999999999999999999999999999999999999999988765443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.78  E-value=0.00021  Score=65.31  Aligned_cols=114  Identities=19%  Similarity=0.202  Sum_probs=85.7

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCC--Cc---------------cCCCccccccchhH--H--HHHHHHHH
Q 020902            6 DNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTG--TR---------------AGSGGYSYLYEPWW--W--AGMITMIV   64 (320)
Q Consensus         6 ~~~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~~--~~---------------~~~~~~~~~~~p~w--~--~G~~l~~~   64 (320)
                      ....|..+++.++++.+...++.|+..++.+...  ..               ...+.........|  .  .|....+.
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTAL  204 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHH
Confidence            3467999999999999999999999764433110  00               00000111112233  2  33344567


Q ss_pred             HHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhh
Q 020902           65 GEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGS  119 (320)
Q Consensus        65 g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~  119 (320)
                      +..++..+++..|.+.+..+..+..+++.+++.+++||+++.+++.|+.+++.|+
T Consensus       205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            8889999999999999999999999999999999999999999999999999885

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.68  E-value=0.00036  Score=56.36  Aligned_cols=71  Identities=18%  Similarity=0.040  Sum_probs=61.3

Q ss_pred             chhHHHHH-HHHHHHHHHHHHHHhhcchhhhhcchh-hHHHHHHHHHHHHhcccccccchhhHHHHhhhheee
Q 020902           52 EPWWWAGM-ITMIVGEIANFAAYAFAPAILVTPLGA-LSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSI  122 (320)
Q Consensus        52 ~p~w~~G~-~l~~~g~~~~~~al~~~p~slv~pl~~-~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~  122 (320)
                      ++.|.+.. .++..++.+-..|++..|+++..++-+ ++.+.+.+.+.+++||+++..++.|+.+++.|++.+
T Consensus        28 ~~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         28 RLTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            55554444 457778888888999999999999865 999999999999999999999999999999998876

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.66  E-value=0.00021  Score=69.74  Aligned_cols=118  Identities=15%  Similarity=0.199  Sum_probs=85.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCC-------------------ccCCCccccc--cchhHHHHHH----H
Q 020902            7 NVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGT-------------------RAGSGGYSYL--YEPWWWAGMI----T   61 (320)
Q Consensus         7 ~~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~~~-------------------~~~~~~~~~~--~~p~w~~G~~----l   61 (320)
                      +.+|..+++.++++.++..++||+-.++-+....                   .++.+.....  .++ ++..++    .
T Consensus       187 ~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~i~y~~i~  265 (358)
T PLN00411        187 WLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDI-TLITIVTMAII  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccch-HHHHHHHHHHH
Confidence            5679999999999999999999986554322100                   0000000000  011 111121    1


Q ss_pred             HHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEe
Q 020902           62 MIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLH  125 (320)
Q Consensus        62 ~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~  125 (320)
                      ..+++.+|..+.+..+.+.+....-+.-+++++++..+++|+++..+++|.++|+.|+.+....
T Consensus       266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~  329 (358)
T PLN00411        266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG  329 (358)
T ss_pred             HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence            2346777888999999999999999999999999999999999999999999999998876543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.64  E-value=0.00014  Score=68.12  Aligned_cols=113  Identities=19%  Similarity=0.170  Sum_probs=81.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhccCC-CC-c--c-----C-C---------Ccccc-ccchhH----HHHHHHHHH
Q 020902            9 HGFVLAVSSSIFIGSSFIIKKKGLKKAGTT-GT-R--A-----G-S---------GGYSY-LYEPWW----WAGMITMIV   64 (320)
Q Consensus         9 iGv~lal~~a~~~a~g~vlqk~~~~~~~~~-~~-~--~-----~-~---------~~~~~-~~~p~w----~~G~~l~~~   64 (320)
                      -|..+++.++++++.+.++.|+...+.+.. .. .  .     . .         +.... ..++.|    +.+....++
T Consensus       144 ~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l  223 (281)
T TIGR03340       144 KAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIGG  223 (281)
T ss_pred             hHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHH
Confidence            467788999999999998888753322211 00 0  0     0 0         00000 011112    233344567


Q ss_pred             HHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhhee
Q 020902           65 GEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVS  121 (320)
Q Consensus        65 g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~  121 (320)
                      +..++..+++..|.+.+.++.-++.+++.+++.+++||+++..+++|..+++.|+.+
T Consensus       224 ~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       224 AYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            888899999999999999999999999999999999999999999999999999865

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.64  E-value=4e-05  Score=61.43  Aligned_cols=67  Identities=27%  Similarity=0.437  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheee
Q 020902           56 WAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSI  122 (320)
Q Consensus        56 ~~G~~l~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~  122 (320)
                      ..|.....++..++..++...|.+.+.++..++.+++.+++..++|||++++++.|+.+++.|+.++
T Consensus        58 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   58 FLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             HhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            4455555788899999999999999999999999999999999999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.56  E-value=0.00043  Score=65.33  Aligned_cols=115  Identities=17%  Similarity=0.076  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCc------------cCCCccccccch-hH----HHHHHHHHHHHHHHH
Q 020902            8 VHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTR------------AGSGGYSYLYEP-WW----WAGMITMIVGEIANF   70 (320)
Q Consensus         8 ~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~~~~------------~~~~~~~~~~~p-~w----~~G~~l~~~g~~~~~   70 (320)
                      ..|.++++.++++.+.+.++.||-.++.+.....            .-.+....-.++ .|    +.| ...++++.++.
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-~~t~~~~~l~~  233 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFFILTALALWIKYFLSPQPAMVFSLPAIIKLLLAA-AAMGFGYAAWN  233 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHH-HHHHHHHHHHH
Confidence            4699999999999999999999954332211000            000000011122 22    122 22456788899


Q ss_pred             HHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeE
Q 020902           71 AAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIV  123 (320)
Q Consensus        71 ~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~  123 (320)
                      .+++..|.+.+.++..+..+++.+++..++||+++..+++|.++|+.|+.+..
T Consensus       234 ~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        234 VGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW  286 (295)
T ss_pred             HHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence            99999999999999999999999999999999999999999999999977653

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.53  E-value=0.00077  Score=54.39  Aligned_cols=72  Identities=18%  Similarity=0.212  Sum_probs=61.8

Q ss_pred             cchhHHHHHH-HHHHHHHHHHHHHhhcchhhhhcc-hhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheee
Q 020902           51 YEPWWWAGMI-TMIVGEIANFAAYAFAPAILVTPL-GALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSI  122 (320)
Q Consensus        51 ~~p~w~~G~~-l~~~g~~~~~~al~~~p~slv~pl-~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~  122 (320)
                      +|+.|.+.+. .+.+++.+-..|+...|+++..++ .+++.+.+.+.+.+++||+++..+++|..+++.|++.+
T Consensus        28 ~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          28 TRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL  101 (106)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence            3555655554 467788888899999999999986 67899999999999999999999999999999998765

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.41  E-value=0.00085  Score=63.17  Aligned_cols=116  Identities=15%  Similarity=0.083  Sum_probs=85.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCC----------------CccCCCccccccc-hhHH----HHHHHHHHH
Q 020902            7 NVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTG----------------TRAGSGGYSYLYE-PWWW----AGMITMIVG   65 (320)
Q Consensus         7 ~~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~~----------------~~~~~~~~~~~~~-p~w~----~G~~l~~~g   65 (320)
                      ...|.++++.++++++.+.+..||..++.+...                ...+ +......+ ..|.    .|+...+++
T Consensus       148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        148 NPWGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSG-ERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcC-CcccccCCHHHHHHHHHHHHHHHHHH
Confidence            356999999999999999999998543221100                0000 00011111 2232    333445677


Q ss_pred             HHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeE
Q 020902           66 EIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIV  123 (320)
Q Consensus        66 ~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~  123 (320)
                      ..++..+++..|.+.+..+..+..+++++++.+++||+++..+++|..+++.|+.+..
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~  284 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT  284 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence            8899999999999999999999999999999999999999999999999999987653

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.38  E-value=0.00035  Score=64.95  Aligned_cols=268  Identities=17%  Similarity=0.237  Sum_probs=142.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhccCC--CCcc-CC-----Cccccccch--------hH--HHHHHHHHHHHHHHH
Q 020902            9 HGFVLAVSSSIFIGSSFIIKKKGLKKAGTT--GTRA-GS-----GGYSYLYEP--------WW--WAGMITMIVGEIANF   70 (320)
Q Consensus         9 iGv~lal~~a~~~a~g~vlqk~~~~~~~~~--~~~~-~~-----~~~~~~~~p--------~w--~~G~~l~~~g~~~~~   70 (320)
                      +|+++..++ .+++...++-++...-.++.  ..|- ..     .-.-|.+.|        .|  +-|+.-+ .|..+..
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~-tgvmlmy  115 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGF-TGVMLMY  115 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhh-hHHHHHH
Confidence            567777788 77777777777765433321  0000 00     001111211        12  1232222 4556788


Q ss_pred             HHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeE----EecCCCcccCCHHHHHHHhcCch
Q 020902           71 AAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIV----LHAPHERTIHSVKELWHLATQPG  146 (320)
Q Consensus        71 ~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~----~~~~~~~~~~t~~el~~~~~~~~  146 (320)
                      .||...|++=..-+.-.+-+++.++++.+||||.|+.|.+|..+...|+++++    ++|.+++...+.+ .  -+..|.
T Consensus       116 ya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~-~--~~~~~g  192 (346)
T KOG4510|consen  116 YALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQ-V--EYDIPG  192 (346)
T ss_pred             HHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccc-c--cccCCc
Confidence            99999998888888888999999999999999999999999999999999885    3554433222211 1  112233


Q ss_pred             hHHHHH-HHHHHHHHHHHh-hcccCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCccchhhHHHH-HHHHHHH
Q 020902          147 FLVYGG-IVLVVVGVLIFK-FVPTHGNSHLIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWI-FTVVVIF  223 (320)
Q Consensus       147 fl~~~~-~~~~~~~~l~~~-~~~r~~~~~~~~~~~~~gllg~~s~l~~K~v~~~l~~~~~g~~~~~~~~~yl-~~~~~v~  223 (320)
                      -..-+. +........+.+ ..++-...-.+-|-+.-++..+.  +-...        ......-..+.=|. ++...+.
T Consensus       193 t~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~--I~~~~--------ig~~~lP~cgkdr~l~~~lGvf  262 (346)
T KOG4510|consen  193 TVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSL--IGCAS--------IGAVQLPHCGKDRWLFVNLGVF  262 (346)
T ss_pred             hHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHH--HHHhh--------ccceecCccccceEEEEEehhh
Confidence            211111 111111111111 12221111111222211111111  00001        11111122222233 3334555


Q ss_pred             HHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 020902          224 TCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMG  299 (320)
Q Consensus       224 ~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~~~  299 (320)
                      ..+.| .++..++|+-.+-. +.++...+.+.+..--+++|+|+..  .|.+    +|.+.++..++..++.|..+
T Consensus       263 gfigQ-IllTm~lQiErAGp-vaim~~~dvvfAf~wqv~ff~~~Pt--~ws~----~Ga~~vvsS~v~~a~~kwa~  330 (346)
T KOG4510|consen  263 GFIGQ-ILLTMGLQIERAGP-VAIMTYTDVVFAFFWQVLFFGHWPT--IWSW----VGAVMVVSSTVWVALKKWAG  330 (346)
T ss_pred             hhHHH-HHHHHHhhhhccCC-eehhhHHHHHHHHHHHHHHhcCCCh--HHHh----hceeeeehhHHHHHHHHHhc
Confidence            55656 57899999665432 3466777888899999999999854  4443    45555555566666666665

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.36  E-value=0.005  Score=50.10  Aligned_cols=107  Identities=12%  Similarity=0.105  Sum_probs=70.8

Q ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHH
Q 020902          176 VYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTL  255 (320)
Q Consensus       176 ~~~~~~gllg~~s~l~~K~v~~~l~~~~~g~~~~~~~~~yl~~~~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~  255 (320)
                      +|..++.++.....++.|.-..      ..+..+++|.........+.+...-.+++..++++-|....+|+.+ .-.+.
T Consensus         4 ~~l~~ai~~ev~g~~~lK~s~~------~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~-l~~v~   76 (111)
T PRK15051          4 LTLVFASLLSVAGQLCQKQATR------PVAIGKRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLS-LNFVW   76 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc------cCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHH-HHHHH
Confidence            3444455554444445554211      0111234544333333333444556778899999999999999999 78888


Q ss_pred             HHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccC
Q 020902          256 TIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKT  295 (320)
Q Consensus       256 ~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~  295 (320)
                      +.+.|..+|+|..+.      ...+|..++++|+++++++
T Consensus        77 ~~~~~~l~f~E~ls~------~~~~Gi~lii~Gv~~i~~~  110 (111)
T PRK15051         77 VTLAAVKLWHEPVSP------RHWCGVAFIIGGIVILGST  110 (111)
T ss_pred             HHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHHhcc
Confidence            899999999997653      3557888889999998864

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.33  E-value=0.0016  Score=61.48  Aligned_cols=115  Identities=21%  Similarity=0.184  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCc---------------------cCCC-c-cc-cccchhHH-----HH
Q 020902            8 VHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTR---------------------AGSG-G-YS-YLYEPWWW-----AG   58 (320)
Q Consensus         8 ~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~~~~---------------------~~~~-~-~~-~~~~p~w~-----~G   58 (320)
                      ..|..+++.++++.+...+++||-.++.+.....                     .+.. . .. .-.++..|     .|
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            4799999999999999999999854332211000                     0000 0 00 00122222     23


Q ss_pred             HHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheee
Q 020902           59 MITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSI  122 (320)
Q Consensus        59 ~~l~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~  122 (320)
                      ++..++++.++..+++..+...+.++..+.-+++.+++.+++||+++..+++|.++++.|+.+.
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~  285 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN  285 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence            4445677778888888899999999999999999999999999999999999999999998754

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.32  E-value=0.0018  Score=53.90  Aligned_cols=72  Identities=17%  Similarity=0.213  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhcc
Q 020902          215 WIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHK  294 (320)
Q Consensus       215 yl~~~~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~  294 (320)
                      |+.+-+.....-.+.||  +||+.++++.++|+= -......++.+..+++|.....      -..|+.++.+|++++++
T Consensus        69 flilSGla~glswl~Yf--~ALk~G~as~VvPld-k~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs~  139 (140)
T COG2510          69 FLILSGLAGGLSWLLYF--RALKKGKASRVVPLD-KTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVSL  139 (140)
T ss_pred             hhhHHHHHHHHHHHHHH--HHHhcCCcceEEEcc-cccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEec
Confidence            44444444444445555  799999999999984 4566678899999999987643      34788999999999886


Q ss_pred             C
Q 020902          295 T  295 (320)
Q Consensus       295 ~  295 (320)
                      +
T Consensus       140 ~  140 (140)
T COG2510         140 R  140 (140)
T ss_pred             C
Confidence            4

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.20  E-value=0.0092  Score=48.60  Aligned_cols=79  Identities=14%  Similarity=0.145  Sum_probs=62.8

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHH
Q 020902          209 FVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSG  288 (320)
Q Consensus       209 ~~~~~~yl~~~~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~G  288 (320)
                      |+++.+....+.   +...-++++.+++++-|..+.+|+-...-++...+.|.++|+|..+.      .-..|..+++.|
T Consensus        27 f~~~~~~i~~~~---~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~------~~~~gi~lIi~G   97 (110)
T PRK09541         27 FTRLWPSVGTII---CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL------PAIIGMMLICAG   97 (110)
T ss_pred             CCchhHHHHHHH---HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHH
Confidence            677777665433   33556778899999999999999998888999999999999997653      355788889999


Q ss_pred             HhhhccCC
Q 020902          289 TFLLHKTK  296 (320)
Q Consensus       289 v~lLs~~~  296 (320)
                      ++++...+
T Consensus        98 Vi~l~l~~  105 (110)
T PRK09541         98 VLVINLLS  105 (110)
T ss_pred             HHHHhcCC
Confidence            99996544

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.07  E-value=0.015  Score=48.20  Aligned_cols=68  Identities=16%  Similarity=0.258  Sum_probs=56.3

Q ss_pred             HHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCC
Q 020902          224 TCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKD  297 (320)
Q Consensus       224 ~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~  297 (320)
                      +...-++++.+++++-|..+.+|+....-++...+.|..+|+|..+.      .-.+|..+++.|++.+...++
T Consensus        39 ~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~------~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         39 MISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSL------MKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHhhcCCC
Confidence            34556788999999999999999988888889999999999997653      356788889999999865554

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=96.99  E-value=0.17  Score=47.84  Aligned_cols=118  Identities=15%  Similarity=0.099  Sum_probs=73.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHh----hhhhccCCC--------------CccCCCccccccchhHHHHHHHHHHHHH
Q 020902            6 DNVHGFVLAVSSSIFIGSSFIIKKK----GLKKAGTTG--------------TRAGSGGYSYLYEPWWWAGMITMIVGEI   67 (320)
Q Consensus         6 ~~~iGv~lal~~a~~~a~g~vlqk~----~~~~~~~~~--------------~~~~~~~~~~~~~p~w~~G~~l~~~g~~   67 (320)
                      +.--|+++++.+.++.+.--...|.    +..+.-.++              .|.-.+.++..|+|+=+....+..+=..
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~   83 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIG   83 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            3445778888888776655544443    222110010              0111134567888887777776655555


Q ss_pred             HHHHHHhhcchhhhhcchhhHH----HHHHHHHHHHhcccccccchhhHHHHhhhheeeE
Q 020902           68 ANFAAYAFAPAILVTPLGALSI----IFSAVLAHFILREKLHIFGMLGCALCVVGSVSIV  123 (320)
Q Consensus        68 ~~~~al~~~p~slv~pl~~~~l----v~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~  123 (320)
                      .|..-+-.+|-+==.==.+++|    ++|.++++.++|||++|.||+++.+...|+....
T Consensus        84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~  143 (293)
T COG2962          84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQT  143 (293)
T ss_pred             HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence            6777777766541111123333    4678899999999999999999999999977543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=96.85  E-value=0.0067  Score=57.23  Aligned_cols=62  Identities=18%  Similarity=-0.014  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEE
Q 020902           63 IVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVL  124 (320)
Q Consensus        63 ~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~  124 (320)
                      .++..++..+++..|.+.+.++.-+..+++.+++.++++|+++..++.|.++|+.|+.++..
T Consensus       224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            46788999999999999999999999999999999999999999999999999888776643

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.81  E-value=0.0061  Score=55.76  Aligned_cols=116  Identities=24%  Similarity=0.262  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-Cc------c--------CCCcc--ccccchhH--HHHHHHHHHHHHH
Q 020902            8 VHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTG-TR------A--------GSGGY--SYLYEPWW--WAGMITMIVGEIA   68 (320)
Q Consensus         8 ~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~~-~~------~--------~~~~~--~~~~~p~w--~~G~~l~~~g~~~   68 (320)
                      ..|..+++.++++.+...+.+|+-. +..... ..      .        ..+..  ...+...+  ..|+...+++..+
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~  231 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLL  231 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            5899999999999999999999754 211100 00      0        00000  11111111  2333334457888


Q ss_pred             HHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEE
Q 020902           69 NFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVL  124 (320)
Q Consensus        69 ~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~  124 (320)
                      +..++...|.+.+.++.....+++.+++.++++|+++.++++|+++++.|+.+...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~  287 (292)
T COG0697         232 WYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhc
Confidence            89999999999999999999999999999999999999999999999999776543

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.81  E-value=0.028  Score=45.43  Aligned_cols=78  Identities=17%  Similarity=0.224  Sum_probs=62.1

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHH
Q 020902          208 QFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILS  287 (320)
Q Consensus       208 ~~~~~~~yl~~~~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~  287 (320)
                      .|+++.++++.+..   ...-.+++.+++|+-|..+.+++-...-++...+.|..+|+|..+.      ...+|..+++.
T Consensus        25 gf~~~~~~~~~i~~---~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~------~~~~gi~lIi~   95 (105)
T PRK11431         25 GFSRLTPSIITVTA---MIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASP------ARLLSLALIVA   95 (105)
T ss_pred             CCccHHHHHHHHHH---HHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHH
Confidence            37788877765433   3455789999999999999999998888899999999999997653      24577888899


Q ss_pred             HHhhhcc
Q 020902          288 GTFLLHK  294 (320)
Q Consensus       288 Gv~lLs~  294 (320)
                      |++.|..
T Consensus        96 GVv~l~l  102 (105)
T PRK11431         96 GIIGLKL  102 (105)
T ss_pred             HHHhhhc
Confidence            9998853

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=96.78  E-value=0.021  Score=47.83  Aligned_cols=73  Identities=16%  Similarity=0.194  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHH-HHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCCC
Q 020902          220 VVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASI-IMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDM  298 (320)
Q Consensus       220 ~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~-i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~~  298 (320)
                      ..+.+......+.+.++++.|.+..+|+....+....+..-. .+|+|..+.      ...+|..++++|+++++++++.
T Consensus        53 lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~------~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         53 LGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSL------KKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCH------HHHHHHHHHHHHHHHhccCCCC
Confidence            344455667778899999999999999988776444444333 589997653      3668899999999999876553

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.61  E-value=0.42  Score=46.30  Aligned_cols=71  Identities=18%  Similarity=0.161  Sum_probs=63.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEE
Q 020902           54 WWWAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVL  124 (320)
Q Consensus        54 ~w~~G~~l~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~  124 (320)
                      +|-+=-+++.+-+-++.++++-.|.+.=|....+-++.+++++..+|++|+++++|.+.++...|+.++-.
T Consensus        94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~  164 (345)
T KOG2234|consen   94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQL  164 (345)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhc
Confidence            33444467888777999999999999999999999999999999999999999999999999999988753

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.54  E-value=0.049  Score=44.02  Aligned_cols=77  Identities=25%  Similarity=0.247  Sum_probs=60.7

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHH
Q 020902          209 FVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSG  288 (320)
Q Consensus       209 ~~~~~~yl~~~~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~G  288 (320)
                      |+++.+++..+..   ...-.+++.+++|+-|..+.+++-.-+-+....+.|.++|+|..+.      .-..|..++++|
T Consensus        27 f~~~~~~il~~v~---~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~------~~~~gl~LiiaG   97 (106)
T COG2076          27 FTRLWPSILTIVG---YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSL------IKLLGLALILAG   97 (106)
T ss_pred             ccccchHHHHHHH---HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCH------HHHHHHHHHHHH
Confidence            6666666654433   2445678999999999999999999888999999999999997652      355778889999


Q ss_pred             Hhhhcc
Q 020902          289 TFLLHK  294 (320)
Q Consensus       289 v~lLs~  294 (320)
                      ++.|-.
T Consensus        98 vi~Lk~  103 (106)
T COG2076          98 VIGLKL  103 (106)
T ss_pred             HHHhhh
Confidence            998854

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.47  E-value=0.06  Score=43.81  Aligned_cols=76  Identities=18%  Similarity=0.249  Sum_probs=60.3

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHH
Q 020902          208 QFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILS  287 (320)
Q Consensus       208 ~~~~~~~yl~~~~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~  287 (320)
                      .+++|.+....+..   ...-.+++.+++|+-|..+.+|+-...-++...+.|..+|+|..+.      ....|..+++.
T Consensus        31 gf~~~~~~~~~~~~---~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~------~~~~gi~lIi~  101 (109)
T PRK10650         31 GFRRKIYGILSLAA---VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNR------KGWIGLVLLLA  101 (109)
T ss_pred             CCcchHHHHHHHHH---HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCH------HHHHHHHHHHH
Confidence            37888876655433   3445679999999999999999998888899999999999997653      34577778888


Q ss_pred             HHhhh
Q 020902          288 GTFLL  292 (320)
Q Consensus       288 Gv~lL  292 (320)
                      |++.+
T Consensus       102 GVi~l  106 (109)
T PRK10650        102 GMVMI  106 (109)
T ss_pred             HHHHh
Confidence            98887

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=96.29  E-value=0.033  Score=53.98  Aligned_cols=124  Identities=22%  Similarity=0.192  Sum_probs=78.0

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCC--------------Cc----cCCCccccccchhHHHHHHHHHHHH
Q 020902            5 SDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTG--------------TR----AGSGGYSYLYEPWWWAGMITMIVGE   66 (320)
Q Consensus         5 ~~~~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~~--------------~~----~~~~~~~~~~~p~w~~G~~l~~~g~   66 (320)
                      ++..+|=++++.|++++|+..++||+-.++.+...              +.    +..+..+.-  +.|-.+ .+++...
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~--w~~~~~-~~~v~~~  240 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIH--WTSQVI-GLLVGYA  240 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccC--CChhhH-HHHHHHH
Confidence            46789999999999999999999999766543210              00    000111211  112111 1222222


Q ss_pred             HHHHHHHhhcchhh-------hhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCcc
Q 020902           67 IANFAAYAFAPAIL-------VTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERT  131 (320)
Q Consensus        67 ~~~~~al~~~p~sl-------v~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~~  131 (320)
                      ++.+.-+...|..+       +.-=...+-++++++..++.|+++++.-++|.++|++|.++.....+++++
T Consensus       241 ~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~  312 (334)
T PF06027_consen  241 LCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEE  312 (334)
T ss_pred             HHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccc
Confidence            34444444444432       222234457889999999999999999999999999998888765554443

Some of the sequences in this family are annotated as putative membrane proteins.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=95.96  E-value=0.064  Score=50.37  Aligned_cols=75  Identities=16%  Similarity=0.241  Sum_probs=58.0

Q ss_pred             HHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 020902          225 CLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGDSP  302 (320)
Q Consensus       225 ~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~~~~~~  302 (320)
                      .+.| ..+-++.++-..+...|+-...--+.+.+.|+++|+||....  ++..=.+++++++.|+++-+.+++.++++
T Consensus        56 ~iGq-~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~--~~~~G~~Al~liiiGv~lts~~~~~~~~~  130 (269)
T PF06800_consen   56 AIGQ-IGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTT--QKIIGFLALVLIIIGVILTSYQDKKSDKS  130 (269)
T ss_pred             HHHH-HHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcc--hHHHHHHHHHHHHHHHHHhcccccccccc
Confidence            3444 333456777778889999999999999999999999998754  56666678889999999888766665543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=95.64  E-value=0.1  Score=48.46  Aligned_cols=120  Identities=18%  Similarity=0.170  Sum_probs=86.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhccC-CC--------------CccCCCccccccchh-HHHHHHHHHHH----H
Q 020902            7 NVHGFVLAVSSSIFIGSSFIIKKKGLKKAGT-TG--------------TRAGSGGYSYLYEPW-WWAGMITMIVG----E   66 (320)
Q Consensus         7 ~~iGv~lal~~a~~~a~g~vlqk~~~~~~~~-~~--------------~~~~~~~~~~~~~p~-w~~G~~l~~~g----~   66 (320)
                      -..|+.+|+.+..|-+.=.+.-||..+..+- .+              ....+ -..-+.+|. -..++..-+++    +
T Consensus       146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~-ag~~l~~p~ll~laLgvavlSSalPY  224 (292)
T COG5006         146 DPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQ-AGPALFSPSLLPLALGVAVLSSALPY  224 (292)
T ss_pred             CHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhh-cchhhcChHHHHHHHHHHHHhcccch
Confidence            4579999999999988877777776532211 00              00001 123333444 34444444444    4


Q ss_pred             HHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecC
Q 020902           67 IANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAP  127 (320)
Q Consensus        67 ~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~  127 (320)
                      .+..+|++-.|-..-.-+.++.-.+.++.+..+|||++|..||.|+.+++.++........
T Consensus       225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~  285 (292)
T COG5006         225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR  285 (292)
T ss_pred             HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence            5899999999999999999999999999999999999999999999999998776554333

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.58  E-value=0.11  Score=40.88  Aligned_cols=59  Identities=20%  Similarity=0.184  Sum_probs=31.3

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCC
Q 020902          209 FVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQ  270 (320)
Q Consensus       209 ~~~~~~yl~~~~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~  270 (320)
                      ++++.++...+.   +...-.+++.+++++-|..+.+|+....-++...+.|..+|+|..+.
T Consensus        26 ~~~~~~~~~~~~---~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~   84 (93)
T PF00893_consen   26 FTQLIPTILAVV---GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSL   84 (93)
T ss_dssp             --------HHHH---HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH------
T ss_pred             hcchhhHHHHHH---HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence            566665554332   34556689999999999999999999999999999999999997654

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.57  E-value=1.2  Score=43.63  Aligned_cols=60  Identities=22%  Similarity=0.333  Sum_probs=54.2

Q ss_pred             HHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCc
Q 020902           71 AAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHER  130 (320)
Q Consensus        71 ~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~  130 (320)
                      .||++..++-..=+.+.+=+|++.++..+.+||+|..+.+++.+.+.|++++.....+.+
T Consensus       178 aALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~  237 (416)
T KOG2765|consen  178 AALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN  237 (416)
T ss_pred             HHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc
Confidence            679999999999999999999999999999999999999999999999988877655443

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=95.42  E-value=0.098  Score=49.35  Aligned_cols=72  Identities=17%  Similarity=0.203  Sum_probs=65.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEe
Q 020902           54 WWWAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLH  125 (320)
Q Consensus        54 ~w~~G~~l~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~  125 (320)
                      ....=.++++.|+.+..++|-....|--|-+=+.-++|+.+++.-+||++++.++|+|+..+..|++.+...
T Consensus        88 lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   88 LFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             eecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            344456889999999999999999999999999999999999999999999999999999999998888665

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=95.42  E-value=0.029  Score=53.01  Aligned_cols=115  Identities=20%  Similarity=0.138  Sum_probs=82.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCC--cc-----CC----Ccc---ccccchhHH----HHHHHHHHHHHH
Q 020902            7 NVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGT--RA-----GS----GGY---SYLYEPWWW----AGMITMIVGEIA   68 (320)
Q Consensus         7 ~~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~~~--~~-----~~----~~~---~~~~~p~w~----~G~~l~~~g~~~   68 (320)
                      ...|++.+++++++++.-...-|+.. ..+....  ..     +.    ...   +...++.++    .|+. ..+++.+
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~ia~~~  227 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAFG-VDGLSVLLPQAIGMVIGGIIFNLGHILAKPLKKYAILLNILPGLM-WGIGNFF  227 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHcC-CCcceehhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH-HHHHHHH
Confidence            35699999999999988887777542 1111100  00     00    000   111122333    4444 5677888


Q ss_pred             HHHHHh-hcchhhhhcchhhHHHHHHHHHHHHhcccccccch----hhHHHHhhhheeeE
Q 020902           69 NFAAYA-FAPAILVTPLGALSIIFSAVLAHFILREKLHIFGM----LGCALCVVGSVSIV  123 (320)
Q Consensus        69 ~~~al~-~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~----~g~~li~~G~~~~~  123 (320)
                      .+.+.. ..+.+...++.....+.+.+.+.+++||+.+++++    +|.++++.|+.++.
T Consensus       228 y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       228 YLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            888888 99999999999999999999999999999999999    99999999987664

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=95.30  E-value=0.31  Score=39.20  Aligned_cols=66  Identities=20%  Similarity=0.237  Sum_probs=48.1

Q ss_pred             HHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 020902          227 LQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKDMGD  300 (320)
Q Consensus       227 ~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~~~~  300 (320)
                      .+......|+++.+ ..+. ......++++.+.|.++|+|..+  +.    ...|.+++.+|++++..++..++
T Consensus        47 ~~~~~~~~a~~~~~-~~v~-~i~~~~pi~~~ll~~~~~~er~~--~~----~~~a~~l~~~Gv~li~~~~~~~~  112 (113)
T PF13536_consen   47 VAYLLFFYALSYAP-ALVA-AIFSLSPIFTALLSWLFFKERLS--PR----RWLAILLILIGVILIAWSDLTGA  112 (113)
T ss_pred             HHHHHHHHHHHhCc-HHHH-HHHHHHHHHHHHHHHHHhcCCCC--HH----HHHHHHHHHHHHHHHhhhhcccC
Confidence            34555567888888 4555 45557999999999999999654  33    44577788899999987665543

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=94.99  E-value=0.49  Score=44.62  Aligned_cols=78  Identities=13%  Similarity=0.190  Sum_probs=63.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhc-chhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCc
Q 020902           53 PWWWAGMITMIVGEIANFAAYAFA-PAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHER  130 (320)
Q Consensus        53 p~w~~G~~l~~~g~~~~~~al~~~-p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~  130 (320)
                      +.|..=+.++..-++.|=.|+.+- |.-+=--+=+.+++.|+++++.++|+|-+.+++..++++.+|+++...++.++.
T Consensus        65 k~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~  143 (330)
T KOG1583|consen   65 KDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDG  143 (330)
T ss_pred             hhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcch
Confidence            456666677777778888888775 444444567889999999999999999999999999999999998877766554

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=94.91  E-value=0.058  Score=50.81  Aligned_cols=117  Identities=15%  Similarity=0.197  Sum_probs=77.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcc-------C----------CCcccccc----------c--hhHHH
Q 020902            7 NVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTTGTRA-------G----------SGGYSYLY----------E--PWWWA   57 (320)
Q Consensus         7 ~~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~~~~~-------~----------~~~~~~~~----------~--p~w~~   57 (320)
                      ...|.++++.++++.++..++.||-.++.+.+....       +          .+......          +  ..|..
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            467999999999999999999998644211110000       0          00000000          0  11211


Q ss_pred             HHHH----HHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeE
Q 020902           58 GMIT----MIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIV  123 (320)
Q Consensus        58 G~~l----~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~  123 (320)
                      +...    +......++.+++..+.+...-.+.+.-+++.+++.++++|+++..+++|.++++.|+.+..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~  292 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS  292 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence            2111    12222345567888888888888888889999999999999999999999999999987653

specificities overlap.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=94.80  E-value=0.22  Score=41.59  Aligned_cols=113  Identities=21%  Similarity=0.293  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhc----cCCCC----------------------ccCC---Ccccccc-----chhH
Q 020902           10 GFVLAVSSSIFIGSSFIIKKKGLKKA----GTTGT----------------------RAGS---GGYSYLY-----EPWW   55 (320)
Q Consensus        10 Gv~lal~~a~~~a~g~vlqk~~~~~~----~~~~~----------------------~~~~---~~~~~~~-----~p~w   55 (320)
                      |.++++.|+++.++=.+++|+..++.    ++.+.                      +...   ...+..+     .+..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999977663    11100                      0000   0001111     1122


Q ss_pred             HHHHHH-H---HHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheee
Q 020902           56 WAGMIT-M---IVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSI  122 (320)
Q Consensus        56 ~~G~~l-~---~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~  122 (320)
                      +.-+.. -   ..-+..++..+.......-+-++..--+.+.+++..+++|+++.+++.|.++.+.|....
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            211111 2   233344555566666666777788888999999999999999999999999999997753

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=94.78  E-value=0.9  Score=40.95  Aligned_cols=100  Identities=20%  Similarity=0.250  Sum_probs=72.6

Q ss_pred             HHHHHHHHHHhhhhhccCCC-----------CccCCCccccccc--h--hHHHHHHHHHHHHHHHHHHHhhcchhhhhcc
Q 020902           20 FIGSSFIIKKKGLKKAGTTG-----------TRAGSGGYSYLYE--P--WWWAGMITMIVGEIANFAAYAFAPAILVTPL   84 (320)
Q Consensus        20 ~~a~g~vlqk~~~~~~~~~~-----------~~~~~~~~~~~~~--p--~w~~G~~l~~~g~~~~~~al~~~p~slv~pl   84 (320)
                      ++...-++||..-||++..-           .+.|...+.+++|  |  -.|.      ...-....||.....+.+..+
T Consensus        12 ~~~~~~~ldkL~qRRe~N~ilGhmE~~R~FGe~kG~nik~~~~~taPF~i~Wt------~aNY~Yl~AL~~is~s~asai   85 (290)
T KOG4314|consen   12 CFGASGILDKLRQRREPNSILGHMECFRIFGEDKGFNIKLFFIRTAPFSIFWT------GANYLYLLALKKISASDASAI   85 (290)
T ss_pred             hcccceeHHHHHhcCCCceeechHHHHHHhccccCceeeeeeeeecceEEEEe------cCCcHHHHHHHhcChhhhHHH
Confidence            34555678888777766431           1113233334433  1  1122      233456788999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEe
Q 020902           85 GALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLH  125 (320)
Q Consensus        85 ~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~  125 (320)
                      .++.-.|..+++...||+|+...+++..++.+.|++++.+.
T Consensus        86 ~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~  126 (290)
T KOG4314|consen   86 FACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA  126 (290)
T ss_pred             HHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence            99999999999999999999999999999999998888664

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=93.24  E-value=0.25  Score=39.01  Aligned_cols=61  Identities=16%  Similarity=0.295  Sum_probs=47.0

Q ss_pred             HHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhc
Q 020902          226 LLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLH  293 (320)
Q Consensus       226 l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs  293 (320)
                      .......+.++++.+++.+.++.+ ..++.+.+.|.++++|..+  ..    ...|..+++.|+++++
T Consensus        65 ~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~i~~~~~~~e~~~--~~----~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   65 ALAYLLYFYALKYISASIVSILQY-LSPVFAAILGWLFLGERPS--WR----QIIGIILIIIGVVLIS  125 (126)
T ss_pred             ehHHHHHHHHHHhcchhHHHHHHH-HHHHHHHHHHHHHcCCCCC--HH----HHHHHHHHHHHHHHHH
Confidence            444566688999999998888877 7999999999999999764  32    4566677777777653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.18  E-value=4.8  Score=37.35  Aligned_cols=225  Identities=13%  Similarity=0.098  Sum_probs=111.9

Q ss_pred             HHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCC----CcccCCHH
Q 020902           61 TMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPH----ERTIHSVK  136 (320)
Q Consensus        61 l~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~----~~~~~t~~  136 (320)
                      -+.++.+.+=-|+.+.|.-.---=-+.--+=.++++..+.|.+-++++..-+++|++|+.++.+.-++    +++..-..
T Consensus        94 sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~G  173 (337)
T KOG1580|consen   94 SYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFG  173 (337)
T ss_pred             HHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchH
Confidence            35555666666777776432111111223455788899999999999999999999999998775332    22223333


Q ss_pred             HHHHHhcCchhHHHHHHHHHHHHHHH--HhhcccCCCchHHHH-HHHHHhhhHHHHHHHHHHHHHHHHHhcCCccchhhH
Q 020902          137 ELWHLATQPGFLVYGGIVLVVVGVLI--FKFVPTHGNSHLIVY-VGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQ  213 (320)
Q Consensus       137 el~~~~~~~~fl~~~~~~~~~~~~l~--~~~~~r~~~~~~~~~-~~~~gllg~~s~l~~K~v~~~l~~~~~g~~~~~~~~  213 (320)
                      |+.-.++-       ..-..- ...-  .+.+.+++..+++.| -..+.+.-|...+++-..=+.+.      ..-+||.
T Consensus       174 ElLL~lSL-------~mDGlT-g~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~y------F~~RhP~  239 (337)
T KOG1580|consen  174 ELLLILSL-------AMDGLT-GSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFY------FVQRHPY  239 (337)
T ss_pred             HHHHHHHH-------Hhcccc-hhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHH------HHHhccH
Confidence            43321110       000000 0000  011111222333333 23444433333322211111110      1236777


Q ss_pred             HHHHHH-HHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhh
Q 020902          214 TWIFTV-VVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLL  292 (320)
Q Consensus       214 ~yl~~~-~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lL  292 (320)
                      .|.=+. ..+.+++.| +|.=+....+.|.. ..+.+.---+++++.++++|+...  ++-||    +|.++++.+...=
T Consensus       240 ~~~~l~l~ai~s~LGQ-~fIF~tv~~FgPLt-CSivTTTRKfFTil~SVllf~npl--s~rQw----lgtvlVF~aL~~D  311 (337)
T KOG1580|consen  240 VFWDLTLLAIASCLGQ-WFIFKTVEEFGPLT-CSIVTTTRKFFTILISVLLFNNPL--SGRQW----LGTVLVFSALTAD  311 (337)
T ss_pred             HHHHHHHHHHHHHhhh-HHHHHHHHHhCCee-EEEEeehHHHHHHHHHHHHhcCcC--cHHHH----HHHHHHHHHhhhH
Confidence            655444 344444544 55556666666532 233334455678999999999864  35454    5566666655554


Q ss_pred             ccCCCCCCCCCCCCC
Q 020902          293 HKTKDMGDSPSSDSP  307 (320)
Q Consensus       293 s~~~~~~~~~~~~~~  307 (320)
                      ..+...++-.++..|
T Consensus       312 ~~~GK~a~~t~akkp  326 (337)
T KOG1580|consen  312 VVDGKKAPMTAAKKP  326 (337)
T ss_pred             hhcCCcCccccccCC
Confidence            444443333333333

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=92.87  E-value=0.15  Score=41.07  Aligned_cols=78  Identities=19%  Similarity=0.278  Sum_probs=64.7

Q ss_pred             CccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhcch-hhHHHHHHHHHHHHhccccc-ccchhhHHHHhhhheee
Q 020902           45 GGYSYLYEPWWWAGMITMIVGEIANFAAYAFAPAILVTPLG-ALSIIFSAVLAHFILREKLH-IFGMLGCALCVVGSVSI  122 (320)
Q Consensus        45 ~~~~~~~~p~w~~G~~l~~~g~~~~~~al~~~p~slv~pl~-~~~lv~~~~la~~~l~e~~~-~~~~~g~~li~~G~~~~  122 (320)
                      +.+.++.|+.+++=+.+.-.|+.+.+.-|+-+|.++..|+. ++++.|+++++..+ +|+.. ++.+.|+.+++.|+.+.
T Consensus        45 e~~tl~l~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~a~lGt~liv~Gi~Lc  123 (125)
T KOG4831|consen   45 EMKTLFLNWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGLALLGTSLIVFGIWLC  123 (125)
T ss_pred             HHHHHHHhHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccceeehhhhHHhhhhhhe
Confidence            34577888999999999989999999999999999999985 66888999988765 66665 55567999999998765


Q ss_pred             E
Q 020902          123 V  123 (320)
Q Consensus       123 ~  123 (320)
                      +
T Consensus       124 i  124 (125)
T KOG4831|consen  124 I  124 (125)
T ss_pred             e
Confidence            3

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=92.12  E-value=10  Score=35.50  Aligned_cols=193  Identities=10%  Similarity=0.076  Sum_probs=98.8

Q ss_pred             HHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCCCcccCCHHHHHHHhcCchhHH
Q 020902           70 FAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPHERTIHSVKELWHLATQPGFLV  149 (320)
Q Consensus        70 ~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~~~~~~t~~el~~~~~~~~fl~  149 (320)
                      -.++...|+.+...+.-.+-+....++.+      +.+|.+.+.+.+.|+.++.-.++..++.           +|--..
T Consensus        89 Y~si~riPlGiAVAiEF~GPL~vA~~~sR------r~~d~vwvaLAvlGi~lL~p~~~~~~~l-----------Dp~Gv~  151 (292)
T COG5006          89 YLSIERIPLGIAVAIEFTGPLAVALLSSR------RLRDFVWVALAVLGIWLLLPLGQSVWSL-----------DPVGVA  151 (292)
T ss_pred             HHHHHhccchhhhhhhhccHHHHHHHhcc------chhhHHHHHHHHHHHHhheeccCCcCcC-----------CHHHHH
Confidence            35788899998888777776555444432      3467777788888988776554433322           133333


Q ss_pred             HHHHHHHHHHHHHHh-hcccCCCc-h---HHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHH-HHHH
Q 020902          150 YGGIVLVVVGVLIFK-FVPTHGNS-H---LIVYVGICSAMGSITVMSVKALGIALKLSFSGHNQFVYYQTWIFTV-VVIF  223 (320)
Q Consensus       150 ~~~~~~~~~~~l~~~-~~~r~~~~-~---~~~~~~~~gllg~~s~l~~K~v~~~l~~~~~g~~~~~~~~~yl~~~-~~v~  223 (320)
                      |......+-.  .|. ..+|-|+. +   .+.++.   +.++.-++ --++       .+....+.+|..-.... ..+.
T Consensus       152 ~Al~AG~~Wa--~YIv~G~r~g~~~~g~~g~a~gm---~vAaviv~-Pig~-------~~ag~~l~~p~ll~laLgvavl  218 (292)
T COG5006         152 LALGAGACWA--LYIVLGQRAGRAEHGTAGVAVGM---LVAALIVL-PIGA-------AQAGPALFSPSLLPLALGVAVL  218 (292)
T ss_pred             HHHHHhHHHH--HHHHHcchhcccCCCchHHHHHH---HHHHHHHh-hhhh-------hhcchhhcChHHHHHHHHHHHH
Confidence            3333222221  232 34444321 1   111111   11111110 0011       02223355555433222 2222


Q ss_pred             HHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCC
Q 020902          224 TCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTK  296 (320)
Q Consensus       224 ~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~  296 (320)
                      +...--..-+-+|++-++. ..-+..+.++.++.+.|.++++|...  +.||....+ .+....|+.+=.|++
T Consensus       219 SSalPYsLEmiAL~rlp~~-~F~~LlSLePa~aAl~G~i~L~e~ls--~~qwlaI~~-ViaAsaG~~lt~~~~  287 (292)
T COG5006         219 SSALPYSLEMIALRRLPAR-TFGTLLSLEPALAALSGLIFLGETLT--LIQWLAIAA-VIAASAGSTLTARKP  287 (292)
T ss_pred             hcccchHHHHHHHhhCChh-HHHHHHHhhHHHHHHHHHHHhcCCCC--HHHHHHHHH-HHHHHhccccccCCC
Confidence            2222323335588877644 56677889999999999999999765  556554433 234455655544443

>TIGR00803 nst UDP-galactose transporter

Probab=91.78  E-value=0.63  Score=41.80  Aligned_cols=116  Identities=19%  Similarity=0.197  Sum_probs=79.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhhhccCC------C--------------CccCC--Cccc-ccc-chhHHHHHHH
Q 020902            6 DNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTT------G--------------TRAGS--GGYS-YLY-EPWWWAGMIT   61 (320)
Q Consensus         6 ~~~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~------~--------------~~~~~--~~~~-~~~-~p~w~~G~~l   61 (320)
                      +.+.|+.+.+.+.++.+.+.+.|++..++.+..      .              .+++.  ...+ ... ++.+|.=..+
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLL  161 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHH
Confidence            456777777788888889999999975543211      0              00000  0001 111 1222322234


Q ss_pred             HHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhhee
Q 020902           62 MIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVS  121 (320)
Q Consensus        62 ~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~  121 (320)
                      ...+.++-...++..+-....=...+..+++.+++.++++|+++...|.|+.++..|+.+
T Consensus       162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            455666666677888888888899999999999999999999999999999999988653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=91.77  E-value=3  Score=40.16  Aligned_cols=63  Identities=14%  Similarity=0.246  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEE
Q 020902           62 MIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVL  124 (320)
Q Consensus        62 ~~~g~~~~~~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~  124 (320)
                      +.+|-++.-.++...|++..|-+-++..+++.++++++.+|+.++..+...+.++.|+.+-..
T Consensus        93 ~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~  155 (316)
T KOG1441|consen   93 FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASV  155 (316)
T ss_pred             HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeee
Confidence            346777788899999999999999999999999999999999999999999999988765544

>PRK13499 rhamnose-proton symporter; Provisional

Probab=89.33  E-value=1.9  Score=42.07  Aligned_cols=62  Identities=11%  Similarity=0.101  Sum_probs=49.6

Q ss_pred             hHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCC-CChHHHHHHHHHHHHHHHHHhhhcc
Q 020902          233 NKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDS-QNTSQIVTELCGFVTILSGTFLLHK  294 (320)
Q Consensus       233 n~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~-~~~~~~~~~~~G~~l~i~Gv~lLs~  294 (320)
                      -++.+.--.+.-.|+..-.-.+.+.+.|.++++|+.. .+..+......|.++++.|+.+-++
T Consensus        91 ~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         91 GLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            4566666677789999999999999999999999971 1123555578899999999999988

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=85.73  E-value=4.8  Score=32.42  Aligned_cols=46  Identities=22%  Similarity=0.406  Sum_probs=36.5

Q ss_pred             hcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecCC
Q 020902           82 TPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAPH  128 (320)
Q Consensus        82 ~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~~  128 (320)
                      +.-+.+-++.++.-.+..-|.|+++.||+|...+..|+.++ .++|.
T Consensus        62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vi-l~~pR  107 (109)
T COG1742          62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVI-LFGPR  107 (109)
T ss_pred             HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeee-EeCCC
Confidence            44566677788888888999999999999999999995554 44554

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=85.53  E-value=4.1  Score=33.36  Aligned_cols=53  Identities=17%  Similarity=0.203  Sum_probs=42.0

Q ss_pred             hHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhh
Q 020902          233 NKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFL  291 (320)
Q Consensus       233 n~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~l  291 (320)
                      .-.|.+.|-+..+|+.+...-+++++.|..+.+|..+-.      -..|..++++|+.+
T Consensus        59 ~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   59 FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVAL  111 (113)
T ss_pred             HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeee
Confidence            457888999999999999999999999977777764422      35788888888765

Many members are annotated as potential transmembrane proteins.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=83.96  E-value=2.2  Score=39.78  Aligned_cols=221  Identities=14%  Similarity=0.219  Sum_probs=120.3

Q ss_pred             ccchhHHHHHHH---HHHHHHHHHHHHhhcchhhhhcch-hhHHHHHHHHHHHHhcccccccch----hhHHHHhhhhee
Q 020902           50 LYEPWWWAGMIT---MIVGEIANFAAYAFAPAILVTPLG-ALSIIFSAVLAHFILREKLHIFGM----LGCALCVVGSVS  121 (320)
Q Consensus        50 ~~~p~w~~G~~l---~~~g~~~~~~al~~~p~slv~pl~-~~~lv~~~~la~~~l~e~~~~~~~----~g~~li~~G~~~  121 (320)
                      ..-..|++|++-   -.+|...|+=|......|...|+. +..++-+.+++.+.+||=-+..+.    ++.+++++|+.+
T Consensus        54 ~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~l  133 (288)
T COG4975          54 LTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYL  133 (288)
T ss_pred             cchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheE
Confidence            334567777754   356777788888889999999996 567899999999999998887765    477888899887


Q ss_pred             eEEecCCCcccCCHHHHHHHhcCchhHHHHHHHHHHHHH--HHHhhcccCCCchHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 020902          122 IVLHAPHERTIHSVKELWHLATQPGFLVYGGIVLVVVGV--LIFKFVPTHGNSHLIVYVGICSAMGSITVMSVKALGIAL  199 (320)
Q Consensus       122 ~~~~~~~~~~~~t~~el~~~~~~~~fl~~~~~~~~~~~~--l~~~~~~r~~~~~~~~~~~~~gllg~~s~l~~K~v~~~l  199 (320)
                      -....+++.+..+.+++.+-.          +.+...-+  ..|.+..|.     +-       +.+.++++-++++-.+
T Consensus       134 Ts~~~~~nk~~~~~~n~kkgi----------~~L~iSt~GYv~yvvl~~~-----f~-------v~g~saiLPqAiGMv~  191 (288)
T COG4975         134 TSKQDRNNKEEENPSNLKKGI----------VILLISTLGYVGYVVLFQL-----FD-------VDGLSAILPQAIGMVI  191 (288)
T ss_pred             eeeeccccccccChHhhhhhe----------eeeeeeccceeeeEeeecc-----cc-------ccchhhhhHHHHHHHH
Confidence            776555444444544444311          11110000  011112221     00       1223333333222111


Q ss_pred             H---HHhcCCccchhhHHHHHHHHHHHHHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHH
Q 020902          200 K---LSFSGHNQFVYYQTWIFTVVVIFTCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIV  276 (320)
Q Consensus       200 ~---~~~~g~~~~~~~~~yl~~~~~v~~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~  276 (320)
                      -   ....+.+-..+-.+|.-+...+.-+..-+.++-.+=+.+-++ ...+-|.. .+.+.++|+.+++|...  ..++.
T Consensus       192 ~ali~~~~~~~~~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt-~FSlSQlg-ViisTiGGIl~L~ekKt--kkEm~  267 (288)
T COG4975         192 GALILGFFKMEKRFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVAT-SFSLSQLG-VIISTIGGILFLGEKKT--KKEMV  267 (288)
T ss_pred             HHHHHhhcccccchHHHHHHHHhhHHHHHhhHHHHHHhhhhhceee-eeeHhhhe-eeeeecceEEEEeccCc--hhhhh
Confidence            0   011122233444445544433222222222221111222211 11111111 12466799999999764  77899


Q ss_pred             HHHHHHHHHHHHHhhhccCC
Q 020902          277 TELCGFVTILSGTFLLHKTK  296 (320)
Q Consensus       277 ~~~~G~~l~i~Gv~lLs~~~  296 (320)
                      ..+.|.++++.|.++|.--|
T Consensus       268 ~v~iGiilivvgai~lg~~K  287 (288)
T COG4975         268 YVIIGIILIVVGAILLGIAK  287 (288)
T ss_pred             hhhhhHHHHHHHhhhhheec
Confidence            99999999999999887544

>PRK02237 hypothetical protein; Provisional

Probab=83.44  E-value=4.5  Score=32.79  Aligned_cols=44  Identities=23%  Similarity=0.391  Sum_probs=35.8

Q ss_pred             cchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheeeEEecC
Q 020902           83 PLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLHAP  127 (320)
Q Consensus        83 pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~~~  127 (320)
                      .-+.+-++.+++-.+..-|+|+++.|++|..++.+|+.++. ++|
T Consensus        64 AYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~-~~p  107 (109)
T PRK02237         64 AYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM-YAP  107 (109)
T ss_pred             HhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe-ecC
Confidence            34556677777889999999999999999999999987664 344

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=82.91  E-value=2.5  Score=40.99  Aligned_cols=52  Identities=15%  Similarity=0.284  Sum_probs=43.0

Q ss_pred             HHHhhcchhhhhcchhhHHHHHHHHHHHHhcccccccchhhHHHHhhhheee
Q 020902           71 AAYAFAPAILVTPLGALSIIFSAVLAHFILREKLHIFGMLGCALCVVGSVSI  122 (320)
Q Consensus        71 ~al~~~p~slv~pl~~~~lv~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~  122 (320)
                      .++...+.....-.+.+--++..+++.+++||+++..+++|.++++.|+.+.
T Consensus       295 ~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY  346 (350)
T PTZ00343        295 YCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY  346 (350)
T ss_pred             HHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence            4566666666666666777899999999999999999999999999998754

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=81.84  E-value=1.3  Score=41.25  Aligned_cols=62  Identities=21%  Similarity=0.397  Sum_probs=49.9

Q ss_pred             HhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCC
Q 020902          234 KALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTKD  297 (320)
Q Consensus       234 ~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~~  297 (320)
                      +|.+.-..+...|+-.-..-+.+.+.|+.+|+||.+.  .+...=..+.++++.|+++=+.+++
T Consensus        78 ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~--~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          78 KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTP--TQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hheeeeeeeccccccchhhHhhceeeeEEEEeccCcc--hhHHHHHHHHHHHHHhheEeeeecc
Confidence            5777777888899999888899999999999999874  3666555677888999998765554

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=81.63  E-value=55  Score=31.96  Aligned_cols=286  Identities=14%  Similarity=0.201  Sum_probs=143.0

Q ss_pred             CccchHHHHHHHHHHHHHHHHHHHHHHhhhhhccCC-----C-------Cc-----cCCCccccccc----hhHHHHH--
Q 020902            3 ISSDNVHGFVLAVSSSIFIGSSFIIKKKGLKKAGTT-----G-------TR-----AGSGGYSYLYE----PWWWAGM--   59 (320)
Q Consensus         3 ~~~~~~iGv~lal~~a~~~a~g~vlqk~~~~~~~~~-----~-------~~-----~~~~~~~~~~~----p~w~~G~--   59 (320)
                      |.++..+|++...+++++.+.=.+=.||-..=+=+.     +       +-     .-.+..+++++    -.|+.-+  
T Consensus         1 m~~~ii~Gii~h~iGg~~~~sfy~P~kkvk~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    1 MNSAIILGIIFHAIGGFASGSFYVPFKKVKGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             CCchHHHHHHHHHHHHHHhhhhccchhhcCCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            677889999999999999777666555521100000     0       00     00011122221    1222111  


Q ss_pred             HHHHHHHHHHHHHHhhcchhhhhcch-hhHHHHHHHHHHHHhcc-------cccccchhhHHHHhhhheeeEEecCCCcc
Q 020902           60 ITMIVGEIANFAAYAFAPAILVTPLG-ALSIIFSAVLAHFILRE-------KLHIFGMLGCALCVVGSVSIVLHAPHERT  131 (320)
Q Consensus        60 ~l~~~g~~~~~~al~~~p~slv~pl~-~~~lv~~~~la~~~l~e-------~~~~~~~~g~~li~~G~~~~~~~~~~~~~  131 (320)
                      .+-.+|.+..=.+.++.-+|+.+.+. .+..++..++-..+.++       +-.+..++|++++.+|+.+....+...+.
T Consensus        81 ~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~  160 (344)
T PF06379_consen   81 VLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK  160 (344)
T ss_pred             HHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh
Confidence            11234444444566677777766653 34445555555555432       22345567999999999988776543222


Q ss_pred             cCCHHHHHHHhcCchhHHHHHHHHHHHHHHHHhh-cc--------cCCCchHHHHHH----HHHhhhHHHHHHHHHHHHH
Q 020902          132 IHSVKELWHLATQPGFLVYGGIVLVVVGVLIFKF-VP--------THGNSHLIVYVG----ICSAMGSITVMSVKALGIA  198 (320)
Q Consensus       132 ~~t~~el~~~~~~~~fl~~~~~~~~~~~~l~~~~-~~--------r~~~~~~~~~~~----~~gllg~~s~l~~K~v~~~  198 (320)
                      +.+ +|-.+.--+.. +.-.++..+.....-+-. ..        ..|...  .|..    .--+.||+..=+.=++-..
T Consensus       161 ~~~-~~~~efn~~kG-l~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~--l~~~l~~~vvv~~GGf~tN~~yc~~~l  236 (344)
T PF06379_consen  161 ELG-EEAKEFNFKKG-LIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNP--LYANLPVYVVVLWGGFITNLIYCLILL  236 (344)
T ss_pred             hhc-cchhhhhhhhh-HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCc--HHHhCchhhhhhhhHHHHHHHHHHHHH
Confidence            222 11122111111 111122222221111101 11        112111  1111    1112344433333333322


Q ss_pred             HHH-Hhc--CCccc-hhh--HHHHHHHHHHHHHHHHHHHHhHhhcccC---ceeechhHHHHHHHHHHHHHHHHhcccCC
Q 020902          199 LKL-SFS--GHNQF-VYY--QTWIFTVVVIFTCLLQINYLNKALDTFN---TAVISPVYYVMFTTLTIVASIIMFKDWDS  269 (320)
Q Consensus       199 l~~-~~~--g~~~~-~~~--~~yl~~~~~v~~~l~Q~~~ln~aL~~~~---a~~v~P~~~v~~~~~~i~~G~i~f~E~~~  269 (320)
                      .+. ..+  ++... +++  .-|++.+..-..=..|+.+...+=.+-.   ....-++...+..+++.+.| +.++||.+
T Consensus       237 ~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwG-l~lkEWKg  315 (344)
T PF06379_consen  237 AKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWG-LILKEWKG  315 (344)
T ss_pred             hhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHH-HHHHHhcc
Confidence            221 111  11111 222  2255555555566779988877554332   24567777777788888877 56899999


Q ss_pred             CChHHHHHHHHHHHHHHHHHhhhc
Q 020902          270 QNTSQIVTELCGFVTILSGTFLLH  293 (320)
Q Consensus       270 ~~~~~~~~~~~G~~l~i~Gv~lLs  293 (320)
                      .+....-.+.+|+.+++..+.++.
T Consensus       316 ~s~kt~~vl~~G~~vlI~s~~ivG  339 (344)
T PF06379_consen  316 ASKKTIRVLVLGIAVLILSVVIVG  339 (344)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHh
Confidence            998888888999998888887764

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>TIGR00803 nst UDP-galactose transporter

Probab=80.77  E-value=21  Score=31.80  Aligned_cols=56  Identities=14%  Similarity=0.141  Sum_probs=39.7

Q ss_pred             HHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHh
Q 020902          228 QINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTF  290 (320)
Q Consensus       228 Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~  290 (320)
                      |-.+.+..+++.|++ ..-+......+.+.+.+..+|+|...  ..    ...|..+++.|++
T Consensus       165 ~~~~v~~vlk~~~~~-~~~~~~~~~~~~s~lls~~~f~~~ls--~~----~~~g~~lV~~~~~  220 (222)
T TIGR00803       165 GGLCIGGVVRYADNT-TKSFVTALSIILSTLASVRLFDAKIS--ST----FYLGAILVFLATF  220 (222)
T ss_pred             cCceeeehhHHhHHH-HHHHHHHHHHHHHHHHHHHHhcCCcc--HH----HHHHHHHHHeeeE
Confidence            444577788888877 66777788888899999999998654  22    4456666665554

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	320
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	99.06
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.92
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.66
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.56

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=99.06  E-value=7.3e-10  Score=88.98  Aligned_cols=99  Identities=12%  Similarity=0.078  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccCCCCccCCCccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhcc-hhhHHH
Q 020902           12 VLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMITMIVGEIANFAAYAFAPAILVTPL-GALSII   90 (320)
Q Consensus        12 ~lal~~a~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~w~~G~~l~~~g~~~~~~al~~~p~slv~pl-~~~~lv   90 (320)
                      ++-+++.++-+.++.+.|++..               ..+.+.++.+...+++++.+...+++..|++.+.|+ .+++.+
T Consensus         5 l~l~~a~~~e~~~~~~lK~s~~---------------~~~~~~~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v   69 (110)
T 3b5d_A            5 IYLGGAILAEVIGTTLMKFSEG---------------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIV   69 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhccC---------------cchHHHHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHH
Confidence            4556788889999999998620               112355677888899999999999999999999999 899999


Q ss_pred             HHHHHHHHHhcccccccchhhHHHHhhhheeeEEe
Q 020902           91 FSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLH  125 (320)
Q Consensus        91 ~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~  125 (320)
                      ++.+++.+++||++++++++|+.+|+.|++++...
T Consensus        70 ~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           70 LISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999998877553

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.92  E-value=9.3e-10  Score=91.85  Aligned_cols=99  Identities=12%  Similarity=0.078  Sum_probs=69.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccCCCCccCCCccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhcc-hhhHHH
Q 020902           12 VLAVSSSIFIGSSFIIKKKGLKKAGTTGTRAGSGGYSYLYEPWWWAGMITMIVGEIANFAAYAFAPAILVTPL-GALSII   90 (320)
Q Consensus        12 ~lal~~a~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~w~~G~~l~~~g~~~~~~al~~~p~slv~pl-~~~~lv   90 (320)
                      ++-+++.++-+.|+.+.|++..               ..+.+.++.|++++++++.++..+++..|++.+.|+ ..++.+
T Consensus         5 l~Ll~ail~ev~~~~~lK~s~g---------------~~~~~~~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv   69 (137)
T 2i68_A            5 IYLGGAILAEVIGTTLMKFSEG---------------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIV   69 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC---------------------------CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc---------------cchHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Confidence            4456778889999999999621               112345678888999999999999999999999999 899999


Q ss_pred             HHHHHHHHHhcccccccchhhHHHHhhhheeeEEe
Q 020902           91 FSAVLAHFILREKLHIFGMLGCALCVVGSVSIVLH  125 (320)
Q Consensus        91 ~~~~la~~~l~e~~~~~~~~g~~li~~G~~~~~~~  125 (320)
                      ++.+++.+++||+++.++++|+++|+.|++++...
T Consensus        70 ~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           70 LISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999887543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.66  E-value=0.00011  Score=60.87  Aligned_cols=67  Identities=13%  Similarity=0.141  Sum_probs=46.9

Q ss_pred             HHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCC
Q 020902          224 TCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTK  296 (320)
Q Consensus       224 ~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~  296 (320)
                      +...-.+++++++++.|.+.++|+.....++.+.+.|.++|+|.....      ..+|..+++.|++++.+.+
T Consensus        39 ~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~------~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhcCC
Confidence            344456788999999999999999888999999999999999986532      4578888999999987654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.56  E-value=0.001  Score=52.75  Aligned_cols=67  Identities=13%  Similarity=0.147  Sum_probs=56.0

Q ss_pred             HHHHHHHHHhHhhcccCceeechhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCC
Q 020902          224 TCLLQINYLNKALDTFNTAVISPVYYVMFTTLTIVASIIMFKDWDSQNTSQIVTELCGFVTILSGTFLLHKTK  296 (320)
Q Consensus       224 ~~l~Q~~~ln~aL~~~~a~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~l~i~Gv~lLs~~~  296 (320)
                      +...-.+++++++++.|.+.++|+.....++...+.|..+|+|..+  +    ...+|..+++.|++++...+
T Consensus        39 ~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s--~----~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLD--L----PAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCC--H----HHHHHHHHHHHHHHHHhcCC
Confidence            3344566788899999999999998899999999999999999765  3    34688889999999998754

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00