Citrus Sinensis ID: 020930
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 319 | ||||||
| 255578268 | 330 | xenotropic and polytropic murine leukemi | 0.987 | 0.954 | 0.674 | 1e-115 | |
| 225452879 | 322 | PREDICTED: SPX domain-containing protein | 0.981 | 0.972 | 0.690 | 1e-113 | |
| 224141021 | 321 | predicted protein [Populus trichocarpa] | 0.959 | 0.953 | 0.665 | 1e-109 | |
| 359806636 | 311 | uncharacterized protein LOC100792209 [Gl | 0.934 | 0.958 | 0.670 | 1e-108 | |
| 449447641 | 325 | PREDICTED: SPX domain-containing protein | 0.971 | 0.953 | 0.646 | 1e-107 | |
| 357518245 | 307 | SPX-domain protein [Medicago truncatula] | 0.931 | 0.967 | 0.656 | 1e-105 | |
| 449528445 | 325 | PREDICTED: SPX domain-containing protein | 0.971 | 0.953 | 0.64 | 1e-105 | |
| 18417630 | 318 | SPX domain-containing protein 4 [Arabido | 0.905 | 0.908 | 0.653 | 1e-102 | |
| 7671502 | 387 | ids-4 protein-like [Arabidopsis thaliana | 0.918 | 0.757 | 0.645 | 1e-102 | |
| 296082946 | 276 | unnamed protein product [Vitis vinifera] | 0.840 | 0.971 | 0.633 | 1e-100 |
| >gi|255578268|ref|XP_002530001.1| xenotropic and polytropic murine leukemia virus receptor ids-4, putative [Ricinus communis] gi|223530480|gb|EEF32363.1| xenotropic and polytropic murine leukemia virus receptor ids-4, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/332 (67%), Positives = 262/332 (78%), Gaps = 17/332 (5%)
Query: 1 MKFGKEFTTHLKETLPEWRDKFLCYKPLKKLLKHFPAAD-----FQP-----HSQPTPTV 50
MKFGKEF THL+ETLPEWRDKFLCYKPLKKLLK FPA F P H Q P +
Sbjct: 1 MKFGKEFKTHLEETLPEWRDKFLCYKPLKKLLKQFPATSAASLSFDPSFLLQHQQLFP-I 59
Query: 51 DVVVIIDDDHNRTGSSSSNCWSLDRLQDWFVRILREELEKFNDFYIDKEEEFVIRFQELK 110
D + +D DH+ + ++ SL LQDWF+RIL EEL+KFNDFY+DKEEEF+IRFQELK
Sbjct: 60 DGIDGLDGDHHNPETGANR--SLLLLQDWFIRILNEELDKFNDFYVDKEEEFIIRFQELK 117
Query: 111 DRIERVKEKTG--GAFTSESEFSEEMMEIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKK 168
+RIE +KE++ G FTSESEFSEEMM+IRKD VTIHGEMVLLKNYSSLNFAGL+KILKK
Sbjct: 118 ERIECLKEQSSMNGVFTSESEFSEEMMDIRKDLVTIHGEMVLLKNYSSLNFAGLVKILKK 177
Query: 169 YDKRTGGLLRQPFTQLAVHQPFFTTESLTRLVHECEENLELLFPLEAEVIEATATTPDES 228
YDKRTG LL PFTQLA+HQPFFTTE LTRLVHECE NLELLFPL+AEVIE+ +T +S
Sbjct: 178 YDKRTGELLCLPFTQLALHQPFFTTEPLTRLVHECEANLELLFPLQAEVIESNNSTEKQS 237
Query: 229 KSQL-NAANTLSDNPPNLRDETLDVYRSTLAAMKAIKGLRKASSTSNPLSFSSLFESLDD 287
L N+ N S+ L D+T+D+YRSTLAAMKAI+GL+KASST NPLSFSSLF++ DD
Sbjct: 238 NPPLNNSVNMASEGSSALGDDTIDIYRSTLAAMKAIRGLQKASSTYNPLSFSSLFKNQDD 297
Query: 288 ESIGAVTAENSACNSPALLNNRED-NHDDTHS 318
E+ GAVTAENSA NS + L++ E+ + DD HS
Sbjct: 298 ENNGAVTAENSASNSLSTLHHGEESDKDDVHS 329
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225452879|ref|XP_002283890.1| PREDICTED: SPX domain-containing protein 4-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224141021|ref|XP_002323873.1| predicted protein [Populus trichocarpa] gi|222866875|gb|EEF04006.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|359806636|ref|NP_001241021.1| uncharacterized protein LOC100792209 [Glycine max] gi|255640564|gb|ACU20567.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449447641|ref|XP_004141576.1| PREDICTED: SPX domain-containing protein 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357518245|ref|XP_003629411.1| SPX-domain protein [Medicago truncatula] gi|355523433|gb|AET03887.1| SPX-domain protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|449528445|ref|XP_004171215.1| PREDICTED: SPX domain-containing protein 4-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|18417630|ref|NP_568312.1| SPX domain-containing protein 4 [Arabidopsis thaliana] gi|75164900|sp|Q94A21.1|SPX4_ARATH RecName: Full=SPX domain-containing protein 4; AltName: Full=Protein SPX DOMAIN GENE 4; Short=AtSPX4 gi|15215822|gb|AAK91456.1| AT5g15330/F8M21_220 [Arabidopsis thaliana] gi|56550691|gb|AAV97799.1| At5g15330 [Arabidopsis thaliana] gi|332004767|gb|AED92150.1| SPX domain-containing protein 4 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|7671502|emb|CAB89343.1| ids-4 protein-like [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|296082946|emb|CBI22247.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 319 | ||||||
| TAIR|locus:2150921 | 318 | SPX4 "AT5G15330" [Arabidopsis | 0.968 | 0.971 | 0.562 | 7.4e-82 | |
| UNIPROTKB|Q10B79 | 320 | SPX4 "SPX domain-containing pr | 0.943 | 0.940 | 0.506 | 1.4e-71 | |
| UNIPROTKB|Q7XEY9 | 277 | SPX3 "SPX domain-containing pr | 0.557 | 0.642 | 0.414 | 3.2e-43 | |
| TAIR|locus:2149254 | 256 | SPX1 "AT5G20150" [Arabidopsis | 0.407 | 0.507 | 0.493 | 8.5e-43 | |
| TAIR|locus:2055572 | 245 | SPX3 "AT2G45130" [Arabidopsis | 0.492 | 0.640 | 0.447 | 1.7e-40 | |
| UNIPROTKB|Q7Y0F6 | 247 | SPX5 "SPX domain-containing pr | 0.470 | 0.607 | 0.4 | 2.7e-36 | |
| UNIPROTKB|Q69XJ0 | 295 | SPX1 "SPX domain-containing pr | 0.557 | 0.603 | 0.413 | 1.4e-32 | |
| TAIR|locus:2043844 | 287 | SPX2 "AT2G26660" [Arabidopsis | 0.551 | 0.613 | 0.417 | 6e-32 | |
| UNIPROTKB|Q6Z784 | 280 | SPX2 "SPX domain-containing pr | 0.551 | 0.628 | 0.407 | 1.8e-30 | |
| UNIPROTKB|Q8H398 | 244 | SPX6 "SPX domain-containing pr | 0.498 | 0.651 | 0.373 | 6.8e-30 |
| TAIR|locus:2150921 SPX4 "AT5G15330" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 184/327 (56%), Positives = 215/327 (65%)
Query: 1 MKFGKEFTTHLKETLPEWRDKFLCYKPLKKLLKHFP--AADFQP----HSQPTPTXXXXX 54
MKFGKEF THL+ETLPEWRDKFLCYKPLKKLLK++P +ADF P H+ P
Sbjct: 1 MKFGKEFRTHLEETLPEWRDKFLCYKPLKKLLKYYPYYSADFGPANSDHNDSRPVFADTT 60
Query: 55 XXXXXHNRTGSSSSNCWSLDRLQDWFVRILREELEKFNDFYIDKEEEFVIRFQELKDRIE 114
+ G S D LQ FVRIL +ELEKFNDFY+DKEE+FVIR QELK+RIE
Sbjct: 61 NISSAADDGGVVPGVRPSED-LQGSFVRILNDELEKFNDFYVDKEEDFVIRLQELKERIE 119
Query: 115 RVKEKTGGAFTXXXXXXXXXXXIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKKYDKRTG 174
+VKEK G F IR+D VTIHGEMVLLKNYSSLNFAGL+KILKKYDKRTG
Sbjct: 120 QVKEKNG-EFASESEFSEEMMDIRRDLVTIHGEMVLLKNYSSLNFAGLVKILKKYDKRTG 178
Query: 175 GLLRQPFTQLAVHQPFFTTESLTRLVHECEENLELLFPLEAEVIEATATTPDESKS-QLN 233
GLLR PFTQL +HQPFFTTE LTRLV ECE NLELLFP EAEV+E+++ S S Q N
Sbjct: 179 GLLRLPFTQLVLHQPFFTTEPLTRLVRECEANLELLFPSEAEVVESSSAVQAHSSSHQHN 238
Query: 234 AANTLSDNPPNLRDETLDVYRSTLAAMKAIKGLRKAXXXXXXXXXXXXXXXXXXXXIGAV 293
+ ++ L +E LD+Y+STLAAM+AI+GL+KA V
Sbjct: 239 SPRISAETSSTLGNENLDIYKSTLAAMRAIRGLQKASSTYNPLSFSSLLQNEDDET---V 295
Query: 294 TAENSACNSPALLNNREDNH-DDTHSS 319
TAENS NS N++D+ +DT S
Sbjct: 296 TAENSP-NS----GNKDDSEKEDTGPS 317
|
|
| UNIPROTKB|Q10B79 SPX4 "SPX domain-containing protein 4" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q7XEY9 SPX3 "SPX domain-containing protein 3" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2149254 SPX1 "AT5G20150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2055572 SPX3 "AT2G45130" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q7Y0F6 SPX5 "SPX domain-containing protein 5" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q69XJ0 SPX1 "SPX domain-containing protein 1" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2043844 SPX2 "AT2G26660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6Z784 SPX2 "SPX domain-containing protein 2" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8H398 SPX6 "SPX domain-containing protein 6" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00021003001 | SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (313 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 319 | |||
| pfam03105 | 176 | pfam03105, SPX, SPX domain | 1e-41 | |
| COG5036 | 509 | COG5036, COG5036, SPX domain-containing protein in | 2e-12 |
| >gnl|CDD|217372 pfam03105, SPX, SPX domain | Back alignment and domain information |
|---|
Score = 142 bits (359), Expect = 1e-41
Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 20/191 (10%)
Query: 1 MKFGKEFTTHLKETLPEWRDKFLCYKPLKKLLKHFPAADFQPHSQPTPTVDVVVIIDDDH 60
MKFGK +L +PEWRDK++ YK LKKL+K A + + ++D
Sbjct: 1 MKFGKSLERNL---VPEWRDKYIDYKALKKLIKELTRAK------------LSLTTNEDG 45
Query: 61 NRTGSSSSNCWSLDRLQDWFVRILREELEKFNDFYIDKEEEFVIRFQELKDRIE-----R 115
S+ N L+ + F L +ELEK N FY +KE E + R +EL+ ++E R
Sbjct: 46 EDESSNLLNEEELEEDESEFFEALDKELEKVNSFYKEKEAELLERLEELEKQLEELEERR 105
Query: 116 VKEKTGGAFTSESEFSEEMMEIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKKYDKRTGG 175
+ + + S+ + E++K + ++ E+ LLK+Y LN G KILKKYDK TG
Sbjct: 106 DETSSAKSSPSDKNLLKAFEELKKALLELYRELQLLKSYIELNRTGFRKILKKYDKITGS 165
Query: 176 LLRQPFTQLAV 186
L + + + V
Sbjct: 166 SLSKKYLEKVV 176
|
We have named this region the SPX domain after (SYG1, Pho81 and XPR1). This 180 residue length domain is found at the amino terminus of a variety of proteins. In the yeast protein SYG1, the N-terminus directly binds to the G- protein beta subunit and inhibits transduction of the mating pheromone signal. This finding suggests that all the members of this family are involved in G-protein associated signal transduction. The N-termini of several proteins involved in the regulation of phosphate transport, including the putative phosphate level sensors PHO81 from Saccharomyces cerevisiae and NUC-2 from Neurospora crassa, are also members of this family. The SPX domain of S. cerevisiae low-affinity phosphate transporters Pho87 and Pho90 auto-regulates uptake and prevents efflux. This SPX dependent inhibition is mediated by the physical interaction with Spl2 NUC-2 contains several ankyrin repeats pfam00023. Several members of this family are annotated as XPR1 proteins: the xenotropic and polytropic retrovirus receptor confers susceptibility to infection with murine leukaemia viruses (MLV). The similarity between SYG1, phosphate regulators and XPR1 sequences has been previously noted, as has the additional similarity to several predicted proteins, of unknown function, from Drosophila melanogaster, Arabidopsis thaliana, Caenorhabditis elegans, Schizosaccharomyces pombe, and Saccharomyces cerevisiae. In addition, given the similarities between XPR1 and SYG1 and phosphate regulatory proteins, it has been proposed that XPR1 might be involved in G-protein associated signal transduction and may itself function as a phosphate sensor. Length = 176 |
| >gnl|CDD|227369 COG5036, COG5036, SPX domain-containing protein involved in vacuolar polyphosphate accumulation [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 319 | |||
| KOG1161 | 310 | consensus Protein involved in vacuolar polyphospha | 100.0 | |
| PF03105 | 275 | SPX: SPX domain; InterPro: IPR004331 The SPX domai | 100.0 | |
| KOG1162 | 617 | consensus Predicted small molecule transporter [In | 99.97 | |
| COG5036 | 509 | SPX domain-containing protein involved in vacuolar | 99.9 | |
| COG5408 | 296 | SPX domain-containing protein [Signal transduction | 99.76 |
| >KOG1161 consensus Protein involved in vacuolar polyphosphate accumulation, contains SPX domain [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-45 Score=340.38 Aligned_cols=244 Identities=41% Similarity=0.577 Sum_probs=188.9
Q ss_pred CcchhhHhhhhhhhCchhhhcccCchhhHhHhhcCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCCccchhhhHHHH
Q 020930 1 MKFGKEFTTHLKETLPEWRDKFLCYKPLKKLLKHFPAADFQPHSQPTPTVDVVVIIDDDHNRTGSSSSNCWSLDRLQDWF 80 (319)
Q Consensus 1 MKFGK~L~~~ie~~vPEW~~~YIdYK~LKK~IK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~F 80 (319)
|||||.|++ +.+|||+++|||||.|||+||+........ ++ ....+..|
T Consensus 1 MkFGk~L~~---~~l~ew~~~yinYk~LKK~lK~~~~~~~~~---------------~~-------------~~~~e~dF 49 (310)
T KOG1161|consen 1 MKFGKYLKE---ELLPEWKDKYINYKELKKLLKQYSIQTADS---------------SP-------------DSRDESDF 49 (310)
T ss_pred CchhHHHHH---hhhhhHhhhhcCHHHHHHHHHHhccccccC---------------Cc-------------ccchHHHH
Confidence 999999996 579999999999999999999975432110 00 01157789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 020930 81 VRILREELEKFNDFYIDKEEEFVIRFQELKDRIERVKEKTGGAFTSESEFSEEMMEIRKDFVTIHGEMVLLKNYSSLNFA 160 (319)
Q Consensus 81 ~~~Ld~ELeKVn~Fy~~ke~el~~rl~~L~~~~~~~~~~~~~~~~s~~~~~e~l~~L~~~~~~l~~el~~L~~y~~LN~t 160 (319)
+++|+.||+||+.||.+|++++.+|++.|+++++.. +..+...+.+..|++++.+|++||++|.+|++||+|
T Consensus 50 v~~Ld~ELEKv~~F~lek~~el~~Rl~~L~e~~~~~--------~~~~~~~~~~~~lr~~l~~~~~em~~L~~fs~LN~t 121 (310)
T KOG1161|consen 50 VRLLDAELEKVNGFQLEKESELIIRLKELEEKIDAL--------SLEPPSAEEMKELREELVDFHGEMVLLENFSRLNYT 121 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--------ccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999999998761 011122467889999999999999999999999999
Q ss_pred HHHHHHhhhhhhcCCCCchhHHHHhhcCCCCChHHHHHHHHHHHHHHHHHhhhhHHhhhccCCCCCCccccc--cccc-c
Q 020930 161 GLLKILKKYDKRTGGLLRQPFTQLAVHQPFFTTESLTRLVHECEENLELLFPLEAEVIEATATTPDESKSQL--NAAN-T 237 (319)
Q Consensus 161 gf~KILKK~DK~tg~~l~~~fl~~V~~qpF~~~~~l~~Lv~~~e~~l~~L~~~~~~~~~~~~~~~~~~~~~~--~~~~-~ 237 (319)
||+||||||||+||..++.+|.++|..+|||+++.+.+||.+|+.+++.++|.... ..+...++. ..+ .+.. .
T Consensus 122 Gf~KILKK~DKrtg~~l~~~f~~~l~~~Pf~~~e~~~~Lv~e~~~l~~~l~~~~~~---~~s~~~~~~-~~~~~t~k~wv 197 (310)
T KOG1161|consen 122 GFAKILKKHDKRTGYRLRPYFQVRLLHQPFFTTEQLFRLVYEISILLDLLRPSNRN---GESKESNDS-DFVRRTTKYWV 197 (310)
T ss_pred HHHHHHHHHhcccccccccHHHHHHHhCCCchhhhHHHHHHHHHHHHHHhcccccc---cccccccch-hhhhhcccccc
Confidence 99999999999999999999999999999999999999999999999999987654 111111100 000 0000 0
Q ss_pred CCCCCcc---chHH-HH-HHHHH-HHHHHHHHHHhhccCCccCCCCCCccccCCCc
Q 020930 238 LSDNPPN---LRDE-TL-DVYRS-TLAAMKAIKGLRKASSTSNPLSFSSLFESLDD 287 (319)
Q Consensus 238 ~~d~~~~---~~~~-~~-~~~~~-t~aal~~~~~~~~~~st~~~~s~~~~~~~~~~ 287 (319)
.++.... .+.. +. -+|.+ |++||.|+...++++++|+.|++||+..++.+
T Consensus 198 H~~n~~e~k~~~~~~lpvL~~~~~~d~ait~~~~~n~~~~~y~~~l~~~~~a~~~r 253 (310)
T KOG1161|consen 198 HEDNVNEVKTYILRHLPVLVFNSPTDAAITTLYFDNSGSDLYSQFLLKSLLAEALR 253 (310)
T ss_pred CccccchhHHHHhccCcceecCCcchHHHHHHHHhccchHHHHHHhcccccchhhh
Confidence 1111100 0000 01 12333 99999999999999999999999999999885
|
|
| >PF03105 SPX: SPX domain; InterPro: IPR004331 The SPX domain is named after SYG1/Pho81/XPR1 proteins | Back alignment and domain information |
|---|
| >KOG1162 consensus Predicted small molecule transporter [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG5036 SPX domain-containing protein involved in vacuolar polyphosphate accumulation [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG5408 SPX domain-containing protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 319 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-10 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 5e-10
Identities = 56/359 (15%), Positives = 114/359 (31%), Gaps = 107/359 (29%)
Query: 6 EFTTHLKETLPEWRDKFLCYKPLKKLLKHFPAADFQPHSQPTPT---VDVVVIIDDDHNR 62
E K+ L + D F+ +F D Q + + +D +++ D +
Sbjct: 13 EHQYQYKDILSVFEDAFV---------DNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG 63
Query: 63 TGSSSSNCWSLDRLQDWFVRILREELEKFNDFYIDKEEEFVI-RFQ-ELKDR---IERVK 117
T RL + E ++KF + + +F++ + E +
Sbjct: 64 T----------LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI 113
Query: 118 EKTGGAFTSESEFS-------EEMMEIRK--------DFVTIHGEM------VL----LK 152
E+ + F+ + +++R+ V I G + +
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG-VLGSGKTWVALDVCL 172
Query: 153 NYSS----------LNFA------GLLKILKKYDKRTGGLLRQPFTQLAVHQPFFTTESL 196
+Y LN +L++L+K + + +T + H + ++
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ----IDPNWTSRSDH-----SSNI 223
Query: 197 TRLVHECEENLELLFPLE--------------AEVIEA-------TATTPDESKS-QLNA 234
+H + L L + A+ A TT + + L+A
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSA 283
Query: 235 ANT----LSDNPPNL-RDETLDVYRSTLAAMKAIKGLRKASSTSNPLSFSSLFESLDDE 288
A T L + L DE + L + + L + T+NP S + ES+ D
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLD-CR-PQDLPREVLTTNPRRLSIIAESIRDG 340
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00