Citrus Sinensis ID: 020930


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MKFGKEFTTHLKETLPEWRDKFLCYKPLKKLLKHFPAADFQPHSQPTPTVDVVVIIDDDHNRTGSSSSNCWSLDRLQDWFVRILREELEKFNDFYIDKEEEFVIRFQELKDRIERVKEKTGGAFTSESEFSEEMMEIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKKYDKRTGGLLRQPFTQLAVHQPFFTTESLTRLVHECEENLELLFPLEAEVIEATATTPDESKSQLNAANTLSDNPPNLRDETLDVYRSTLAAMKAIKGLRKASSTSNPLSFSSLFESLDDESIGAVTAENSACNSPALLNNREDNHDDTHSS
cccHHHHHHHHHHccHHHHHHHcccHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccc
ccHHHHHHHHHHHHcHHHHHHHHcHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEccccccccccccccccccccccccc
MKFGKEFTTHLKETLPEwrdkflcykpLKKLLkhfpaadfqphsqptptvdVVVIIdddhnrtgssssncwslDRLQDWFVRILREELEKFNDFYIDKEEEFVIRFQELKDRIERVKektggaftseseFSEEMMEIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKKYDkrtggllrqpftqlavhqpfftteSLTRLVHECEENLELLFPLEAEVIEatattpdesksqlnaantlsdnppnlrdeTLDVYRSTLAAMKAIKGLrkasstsnplsfsslfeslddesigavtaensacnspallnnrednhddthss
mkfgkeftthlketlpewrDKFLCYKPLKKLLKHFPAAdfqphsqptpTVDVVVIIDDDHnrtgssssncwsldrLQDWFVRILREELEkfndfyidkeeeFVIRFQELKDRIERvkektggaftsesefseeMMEIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKKYDKRTGGLLRQPFTQLAVHQPFFTTESLTRLVHECEENLELLFPLEAEVIEATAttpdesksqlnaantlsdnppnlrDETLDVYRSTLAAMKAIKglrkasstsnpLSFSSLFESLDDESIGAVTAEnsacnspallnnrednhddthss
MKFGKEFTTHLKETLPEWRDKFLCYKPLKKLLKHFPAADFQPHSQPTPTvdvvviidddHNRTGSSSSNCWSLDRLQDWFVRILREELEKFNDFYIDKEEEFVIRFQELKDRIERVKEKTGGAFTsesefseemmeIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKKYDKRTGGLLRQPFTQLAVHQPFFTTESLTRLVHECEENLELLFPLEAEVIEATATTPDESKSQLNAANTLSDNPPNLRDETLDVYRSTLAAMKAIKGLRKAsstsnplsfsslfeslddesIGAVTAENSACNSPALLNNREDNHDDTHSS
********THLKETLPEWRDKFLCYKPLKKLLKHFPAADFQP****TPTVDVVVIIDDDH*******SNCWSLDRLQDWFVRILREELEKFNDFYIDKEEEFVIRFQELKDRIE********************MEIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKKYDKRTGGLLRQPFTQLAVHQPFFTTESLTRLVHECEENLELLFPLEAEVIE*********************************Y******************************************************************
MKFGKEFTTHLKETLPEWRDKFLCYKPLKKLLKH**************************************LDRLQDWFVRILREELEKFNDFYIDKEEEFVIRFQELKDRIERVKEKTGGAFTSESEFSEEMMEIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKKYDKRTGGLLRQPFTQLAVHQPFFTTESLTRLVHECEENLELLF******************************PPNLRDETLDVYRSTLAAM*******************SLFESLDD********************************
MKFGKEFTTHLKETLPEWRDKFLCYKPLKKLLKHFPAADFQPHSQPTPTVDVVVIIDDDHNRTGSSSSNCWSLDRLQDWFVRILREELEKFNDFYIDKEEEFVIRFQELKDRIERVKEKTGGAFTSESEFSEEMMEIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKKYDKRTGGLLRQPFTQLAVHQPFFTTESLTRLVHECEENLELLFPLEAEVIEATATTPDESKSQLNAANTLSDNPPNLRDETLDVYRSTLAAMKAI***********PLSFSSLFESLDDESIGAVTAENSACNSPALLNNR**********
MKFGKEFTTHLKETLPEWRDKFLCYKPLKKLLKHFPA*****************************SSNCWSLDRLQDWFVRILREELEKFNDFYIDKEEEFVIRFQELKDRIERVKEKT********EFSEEMMEIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKKYDKRTGGLLRQPFTQLAVHQPFFTTESLTRLVHECEENLELLFPLE*****************************NLRDETLDVYRSTLAAMKAIKGLRKASSTSNPLSFS****************************************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKFGKEFTTHLKETLPEWRDKFLCYKPLKKLLKHFPAADFQPHSQPTPTVDVVVIIDDDHNRTGSSSSNCWSLDRLQDWFVRILREELEKFNDFYIDKxxxxxxxxxxxxxxxxxxxxxTGGAFTSESEFSEEMMEIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKKYDKRTGGLLRQPFTQLAVHQPFFTTESLTRLVHECEENLELLFPLEAEVIEATATTPDESKSQLNAANTLSDNPPNLRDETLDVYRSTLAAMKAIKGLRKASSTSNPLSFSSLFESLDDESIGAVTAENSACNSPALLNNREDNHDDTHSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query319 2.2.26 [Sep-21-2011]
Q94A21318 SPX domain-containing pro yes no 0.905 0.908 0.653 1e-104
Q10B79320 SPX domain-containing pro yes no 0.924 0.921 0.564 3e-88
A2XNL6320 SPX domain-containing pro N/A no 0.924 0.921 0.564 3e-88
Q69XJ0295 SPX domain-containing pro no no 0.824 0.891 0.394 3e-46
Q8LBH4256 SPX domain-containing pro no no 0.730 0.910 0.397 4e-46
B8B4D0295 SPX domain-containing pro N/A no 0.824 0.891 0.394 5e-46
O48781287 SPX domain-containing pro no no 0.815 0.905 0.389 6e-44
Q5PP62245 SPX domain-containing pro no no 0.689 0.897 0.382 1e-43
A2X254278 SPX domain-containing pro N/A no 0.821 0.942 0.380 6e-42
Q7XEY9277 SPX domain-containing pro no no 0.786 0.906 0.363 7e-42
>sp|Q94A21|SPX4_ARATH SPX domain-containing protein 4 OS=Arabidopsis thaliana GN=SPX4 PE=2 SV=1 Back     alignment and function desciption
 Score =  378 bits (970), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 202/309 (65%), Positives = 235/309 (76%), Gaps = 20/309 (6%)

Query: 1   MKFGKEFTTHLKETLPEWRDKFLCYKPLKKLLKHFP--AADFQP----HSQPTP----TV 50
           MKFGKEF THL+ETLPEWRDKFLCYKPLKKLLK++P  +ADF P    H+   P    T 
Sbjct: 1   MKFGKEFRTHLEETLPEWRDKFLCYKPLKKLLKYYPYYSADFGPANSDHNDSRPVFADTT 60

Query: 51  DVVVIIDDDHNRTGSSSSNCWSLDRLQDWFVRILREELEKFNDFYIDKEEEFVIRFQELK 110
           ++    DD     G         + LQ  FVRIL +ELEKFNDFY+DKEE+FVIR QELK
Sbjct: 61  NISSAADD-----GGVVPGVRPSEDLQGSFVRILNDELEKFNDFYVDKEEDFVIRLQELK 115

Query: 111 DRIERVKEKTGGAFTSESEFSEEMMEIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKKYD 170
           +RIE+VKEK G  F SESEFSEEMM+IR+D VTIHGEMVLLKNYSSLNFAGL+KILKKYD
Sbjct: 116 ERIEQVKEKNG-EFASESEFSEEMMDIRRDLVTIHGEMVLLKNYSSLNFAGLVKILKKYD 174

Query: 171 KRTGGLLRQPFTQLAVHQPFFTTESLTRLVHECEENLELLFPLEAEVIEATATTPDESKS 230
           KRTGGLLR PFTQL +HQPFFTTE LTRLV ECE NLELLFP EAEV+E+++     S S
Sbjct: 175 KRTGGLLRLPFTQLVLHQPFFTTEPLTRLVRECEANLELLFPSEAEVVESSSAVQAHSSS 234

Query: 231 -QLNAANTLSDNPPNLRDETLDVYRSTLAAMKAIKGLRKASSTSNPLSFSSLFESLDDES 289
            Q N+    ++    L +E LD+Y+STLAAM+AI+GL+KASST NPLSFSSL ++ DDE+
Sbjct: 235 HQHNSPRISAETSSTLGNENLDIYKSTLAAMRAIRGLQKASSTYNPLSFSSLLQNEDDET 294

Query: 290 IGAVTAENS 298
              VTAENS
Sbjct: 295 ---VTAENS 300





Arabidopsis thaliana (taxid: 3702)
>sp|Q10B79|SPX4_ORYSJ SPX domain-containing protein 4 OS=Oryza sativa subsp. japonica GN=SPX4 PE=2 SV=1 Back     alignment and function description
>sp|A2XNL6|SPX4_ORYSI SPX domain-containing protein 4 OS=Oryza sativa subsp. indica GN=SPX4 PE=4 SV=1 Back     alignment and function description
>sp|Q69XJ0|SPX1_ORYSJ SPX domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=SPX1 PE=2 SV=1 Back     alignment and function description
>sp|Q8LBH4|SPX1_ARATH SPX domain-containing protein 1 OS=Arabidopsis thaliana GN=SPX1 PE=2 SV=2 Back     alignment and function description
>sp|B8B4D0|SPX1_ORYSI SPX domain-containing protein 1 OS=Oryza sativa subsp. indica GN=SPX1 PE=3 SV=1 Back     alignment and function description
>sp|O48781|SPX2_ARATH SPX domain-containing protein 2 OS=Arabidopsis thaliana GN=SPX2 PE=2 SV=1 Back     alignment and function description
>sp|Q5PP62|SPX3_ARATH SPX domain-containing protein 3 OS=Arabidopsis thaliana GN=SPX3 PE=2 SV=1 Back     alignment and function description
>sp|A2X254|SPX2_ORYSI SPX domain-containing protein 2 OS=Oryza sativa subsp. indica GN=SPX2 PE=4 SV=1 Back     alignment and function description
>sp|Q7XEY9|SPX3_ORYSJ SPX domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=SPX3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
255578268330 xenotropic and polytropic murine leukemi 0.987 0.954 0.674 1e-115
225452879322 PREDICTED: SPX domain-containing protein 0.981 0.972 0.690 1e-113
224141021321 predicted protein [Populus trichocarpa] 0.959 0.953 0.665 1e-109
359806636311 uncharacterized protein LOC100792209 [Gl 0.934 0.958 0.670 1e-108
449447641325 PREDICTED: SPX domain-containing protein 0.971 0.953 0.646 1e-107
357518245307 SPX-domain protein [Medicago truncatula] 0.931 0.967 0.656 1e-105
449528445325 PREDICTED: SPX domain-containing protein 0.971 0.953 0.64 1e-105
18417630318 SPX domain-containing protein 4 [Arabido 0.905 0.908 0.653 1e-102
7671502387 ids-4 protein-like [Arabidopsis thaliana 0.918 0.757 0.645 1e-102
296082946276 unnamed protein product [Vitis vinifera] 0.840 0.971 0.633 1e-100
>gi|255578268|ref|XP_002530001.1| xenotropic and polytropic murine leukemia virus receptor ids-4, putative [Ricinus communis] gi|223530480|gb|EEF32363.1| xenotropic and polytropic murine leukemia virus receptor ids-4, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/332 (67%), Positives = 262/332 (78%), Gaps = 17/332 (5%)

Query: 1   MKFGKEFTTHLKETLPEWRDKFLCYKPLKKLLKHFPAAD-----FQP-----HSQPTPTV 50
           MKFGKEF THL+ETLPEWRDKFLCYKPLKKLLK FPA       F P     H Q  P +
Sbjct: 1   MKFGKEFKTHLEETLPEWRDKFLCYKPLKKLLKQFPATSAASLSFDPSFLLQHQQLFP-I 59

Query: 51  DVVVIIDDDHNRTGSSSSNCWSLDRLQDWFVRILREELEKFNDFYIDKEEEFVIRFQELK 110
           D +  +D DH+   + ++   SL  LQDWF+RIL EEL+KFNDFY+DKEEEF+IRFQELK
Sbjct: 60  DGIDGLDGDHHNPETGANR--SLLLLQDWFIRILNEELDKFNDFYVDKEEEFIIRFQELK 117

Query: 111 DRIERVKEKTG--GAFTSESEFSEEMMEIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKK 168
           +RIE +KE++   G FTSESEFSEEMM+IRKD VTIHGEMVLLKNYSSLNFAGL+KILKK
Sbjct: 118 ERIECLKEQSSMNGVFTSESEFSEEMMDIRKDLVTIHGEMVLLKNYSSLNFAGLVKILKK 177

Query: 169 YDKRTGGLLRQPFTQLAVHQPFFTTESLTRLVHECEENLELLFPLEAEVIEATATTPDES 228
           YDKRTG LL  PFTQLA+HQPFFTTE LTRLVHECE NLELLFPL+AEVIE+  +T  +S
Sbjct: 178 YDKRTGELLCLPFTQLALHQPFFTTEPLTRLVHECEANLELLFPLQAEVIESNNSTEKQS 237

Query: 229 KSQL-NAANTLSDNPPNLRDETLDVYRSTLAAMKAIKGLRKASSTSNPLSFSSLFESLDD 287
              L N+ N  S+    L D+T+D+YRSTLAAMKAI+GL+KASST NPLSFSSLF++ DD
Sbjct: 238 NPPLNNSVNMASEGSSALGDDTIDIYRSTLAAMKAIRGLQKASSTYNPLSFSSLFKNQDD 297

Query: 288 ESIGAVTAENSACNSPALLNNRED-NHDDTHS 318
           E+ GAVTAENSA NS + L++ E+ + DD HS
Sbjct: 298 ENNGAVTAENSASNSLSTLHHGEESDKDDVHS 329




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452879|ref|XP_002283890.1| PREDICTED: SPX domain-containing protein 4-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224141021|ref|XP_002323873.1| predicted protein [Populus trichocarpa] gi|222866875|gb|EEF04006.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359806636|ref|NP_001241021.1| uncharacterized protein LOC100792209 [Glycine max] gi|255640564|gb|ACU20567.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|449447641|ref|XP_004141576.1| PREDICTED: SPX domain-containing protein 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357518245|ref|XP_003629411.1| SPX-domain protein [Medicago truncatula] gi|355523433|gb|AET03887.1| SPX-domain protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|449528445|ref|XP_004171215.1| PREDICTED: SPX domain-containing protein 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|18417630|ref|NP_568312.1| SPX domain-containing protein 4 [Arabidopsis thaliana] gi|75164900|sp|Q94A21.1|SPX4_ARATH RecName: Full=SPX domain-containing protein 4; AltName: Full=Protein SPX DOMAIN GENE 4; Short=AtSPX4 gi|15215822|gb|AAK91456.1| AT5g15330/F8M21_220 [Arabidopsis thaliana] gi|56550691|gb|AAV97799.1| At5g15330 [Arabidopsis thaliana] gi|332004767|gb|AED92150.1| SPX domain-containing protein 4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|7671502|emb|CAB89343.1| ids-4 protein-like [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|296082946|emb|CBI22247.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
TAIR|locus:2150921318 SPX4 "AT5G15330" [Arabidopsis 0.968 0.971 0.562 7.4e-82
UNIPROTKB|Q10B79320 SPX4 "SPX domain-containing pr 0.943 0.940 0.506 1.4e-71
UNIPROTKB|Q7XEY9277 SPX3 "SPX domain-containing pr 0.557 0.642 0.414 3.2e-43
TAIR|locus:2149254256 SPX1 "AT5G20150" [Arabidopsis 0.407 0.507 0.493 8.5e-43
TAIR|locus:2055572245 SPX3 "AT2G45130" [Arabidopsis 0.492 0.640 0.447 1.7e-40
UNIPROTKB|Q7Y0F6247 SPX5 "SPX domain-containing pr 0.470 0.607 0.4 2.7e-36
UNIPROTKB|Q69XJ0295 SPX1 "SPX domain-containing pr 0.557 0.603 0.413 1.4e-32
TAIR|locus:2043844287 SPX2 "AT2G26660" [Arabidopsis 0.551 0.613 0.417 6e-32
UNIPROTKB|Q6Z784280 SPX2 "SPX domain-containing pr 0.551 0.628 0.407 1.8e-30
UNIPROTKB|Q8H398244 SPX6 "SPX domain-containing pr 0.498 0.651 0.373 6.8e-30
TAIR|locus:2150921 SPX4 "AT5G15330" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
 Identities = 184/327 (56%), Positives = 215/327 (65%)

Query:     1 MKFGKEFTTHLKETLPEWRDKFLCYKPLKKLLKHFP--AADFQP----HSQPTPTXXXXX 54
             MKFGKEF THL+ETLPEWRDKFLCYKPLKKLLK++P  +ADF P    H+   P      
Sbjct:     1 MKFGKEFRTHLEETLPEWRDKFLCYKPLKKLLKYYPYYSADFGPANSDHNDSRPVFADTT 60

Query:    55 XXXXXHNRTGSSSSNCWSLDRLQDWFVRILREELEKFNDFYIDKEEEFVIRFQELKDRIE 114
                   +  G       S D LQ  FVRIL +ELEKFNDFY+DKEE+FVIR QELK+RIE
Sbjct:    61 NISSAADDGGVVPGVRPSED-LQGSFVRILNDELEKFNDFYVDKEEDFVIRLQELKERIE 119

Query:   115 RVKEKTGGAFTXXXXXXXXXXXIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKKYDKRTG 174
             +VKEK G  F            IR+D VTIHGEMVLLKNYSSLNFAGL+KILKKYDKRTG
Sbjct:   120 QVKEKNG-EFASESEFSEEMMDIRRDLVTIHGEMVLLKNYSSLNFAGLVKILKKYDKRTG 178

Query:   175 GLLRQPFTQLAVHQPFFTTESLTRLVHECEENLELLFPLEAEVIEATATTPDESKS-QLN 233
             GLLR PFTQL +HQPFFTTE LTRLV ECE NLELLFP EAEV+E+++     S S Q N
Sbjct:   179 GLLRLPFTQLVLHQPFFTTEPLTRLVRECEANLELLFPSEAEVVESSSAVQAHSSSHQHN 238

Query:   234 AANTLSDNPPNLRDETLDVYRSTLAAMKAIKGLRKAXXXXXXXXXXXXXXXXXXXXIGAV 293
             +    ++    L +E LD+Y+STLAAM+AI+GL+KA                       V
Sbjct:   239 SPRISAETSSTLGNENLDIYKSTLAAMRAIRGLQKASSTYNPLSFSSLLQNEDDET---V 295

Query:   294 TAENSACNSPALLNNREDNH-DDTHSS 319
             TAENS  NS     N++D+  +DT  S
Sbjct:   296 TAENSP-NS----GNKDDSEKEDTGPS 317




GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0016036 "cellular response to phosphate starvation" evidence=IEP;RCA
GO:0006817 "phosphate ion transport" evidence=RCA
UNIPROTKB|Q10B79 SPX4 "SPX domain-containing protein 4" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q7XEY9 SPX3 "SPX domain-containing protein 3" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2149254 SPX1 "AT5G20150" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055572 SPX3 "AT2G45130" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q7Y0F6 SPX5 "SPX domain-containing protein 5" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q69XJ0 SPX1 "SPX domain-containing protein 1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2043844 SPX2 "AT2G26660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6Z784 SPX2 "SPX domain-containing protein 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q8H398 SPX6 "SPX domain-containing protein 6" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q10B79SPX4_ORYSJNo assigned EC number0.56460.92470.9218yesno
Q94A21SPX4_ARATHNo assigned EC number0.65370.90590.9088yesno
A2XNL6SPX4_ORYSINo assigned EC number0.56460.92470.9218N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00021003001
SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (313 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
pfam03105176 pfam03105, SPX, SPX domain 1e-41
COG5036 509 COG5036, COG5036, SPX domain-containing protein in 2e-12
>gnl|CDD|217372 pfam03105, SPX, SPX domain Back     alignment and domain information
 Score =  142 bits (359), Expect = 1e-41
 Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 20/191 (10%)

Query: 1   MKFGKEFTTHLKETLPEWRDKFLCYKPLKKLLKHFPAADFQPHSQPTPTVDVVVIIDDDH 60
           MKFGK    +L   +PEWRDK++ YK LKKL+K    A             + +  ++D 
Sbjct: 1   MKFGKSLERNL---VPEWRDKYIDYKALKKLIKELTRAK------------LSLTTNEDG 45

Query: 61  NRTGSSSSNCWSLDRLQDWFVRILREELEKFNDFYIDKEEEFVIRFQELKDRIE-----R 115
               S+  N   L+  +  F   L +ELEK N FY +KE E + R +EL+ ++E     R
Sbjct: 46  EDESSNLLNEEELEEDESEFFEALDKELEKVNSFYKEKEAELLERLEELEKQLEELEERR 105

Query: 116 VKEKTGGAFTSESEFSEEMMEIRKDFVTIHGEMVLLKNYSSLNFAGLLKILKKYDKRTGG 175
            +  +  +  S+    +   E++K  + ++ E+ LLK+Y  LN  G  KILKKYDK TG 
Sbjct: 106 DETSSAKSSPSDKNLLKAFEELKKALLELYRELQLLKSYIELNRTGFRKILKKYDKITGS 165

Query: 176 LLRQPFTQLAV 186
            L + + +  V
Sbjct: 166 SLSKKYLEKVV 176


We have named this region the SPX domain after (SYG1, Pho81 and XPR1). This 180 residue length domain is found at the amino terminus of a variety of proteins. In the yeast protein SYG1, the N-terminus directly binds to the G- protein beta subunit and inhibits transduction of the mating pheromone signal. This finding suggests that all the members of this family are involved in G-protein associated signal transduction. The N-termini of several proteins involved in the regulation of phosphate transport, including the putative phosphate level sensors PHO81 from Saccharomyces cerevisiae and NUC-2 from Neurospora crassa, are also members of this family. The SPX domain of S. cerevisiae low-affinity phosphate transporters Pho87 and Pho90 auto-regulates uptake and prevents efflux. This SPX dependent inhibition is mediated by the physical interaction with Spl2 NUC-2 contains several ankyrin repeats pfam00023. Several members of this family are annotated as XPR1 proteins: the xenotropic and polytropic retrovirus receptor confers susceptibility to infection with murine leukaemia viruses (MLV). The similarity between SYG1, phosphate regulators and XPR1 sequences has been previously noted, as has the additional similarity to several predicted proteins, of unknown function, from Drosophila melanogaster, Arabidopsis thaliana, Caenorhabditis elegans, Schizosaccharomyces pombe, and Saccharomyces cerevisiae. In addition, given the similarities between XPR1 and SYG1 and phosphate regulatory proteins, it has been proposed that XPR1 might be involved in G-protein associated signal transduction and may itself function as a phosphate sensor. Length = 176

>gnl|CDD|227369 COG5036, COG5036, SPX domain-containing protein involved in vacuolar polyphosphate accumulation [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 319
KOG1161310 consensus Protein involved in vacuolar polyphospha 100.0
PF03105275 SPX: SPX domain; InterPro: IPR004331 The SPX domai 100.0
KOG1162 617 consensus Predicted small molecule transporter [In 99.97
COG5036 509 SPX domain-containing protein involved in vacuolar 99.9
COG5408296 SPX domain-containing protein [Signal transduction 99.76
>KOG1161 consensus Protein involved in vacuolar polyphosphate accumulation, contains SPX domain [Inorganic ion transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=4.9e-45  Score=340.38  Aligned_cols=244  Identities=41%  Similarity=0.577  Sum_probs=188.9

Q ss_pred             CcchhhHhhhhhhhCchhhhcccCchhhHhHhhcCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCCccchhhhHHHH
Q 020930            1 MKFGKEFTTHLKETLPEWRDKFLCYKPLKKLLKHFPAADFQPHSQPTPTVDVVVIIDDDHNRTGSSSSNCWSLDRLQDWF   80 (319)
Q Consensus         1 MKFGK~L~~~ie~~vPEW~~~YIdYK~LKK~IK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~F   80 (319)
                      |||||.|++   +.+|||+++|||||.|||+||+........               ++             ....+..|
T Consensus         1 MkFGk~L~~---~~l~ew~~~yinYk~LKK~lK~~~~~~~~~---------------~~-------------~~~~e~dF   49 (310)
T KOG1161|consen    1 MKFGKYLKE---ELLPEWKDKYINYKELKKLLKQYSIQTADS---------------SP-------------DSRDESDF   49 (310)
T ss_pred             CchhHHHHH---hhhhhHhhhhcCHHHHHHHHHHhccccccC---------------Cc-------------ccchHHHH
Confidence            999999996   579999999999999999999975432110               00             01157789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 020930           81 VRILREELEKFNDFYIDKEEEFVIRFQELKDRIERVKEKTGGAFTSESEFSEEMMEIRKDFVTIHGEMVLLKNYSSLNFA  160 (319)
Q Consensus        81 ~~~Ld~ELeKVn~Fy~~ke~el~~rl~~L~~~~~~~~~~~~~~~~s~~~~~e~l~~L~~~~~~l~~el~~L~~y~~LN~t  160 (319)
                      +++|+.||+||+.||.+|++++.+|++.|+++++..        +..+...+.+..|++++.+|++||++|.+|++||+|
T Consensus        50 v~~Ld~ELEKv~~F~lek~~el~~Rl~~L~e~~~~~--------~~~~~~~~~~~~lr~~l~~~~~em~~L~~fs~LN~t  121 (310)
T KOG1161|consen   50 VRLLDAELEKVNGFQLEKESELIIRLKELEEKIDAL--------SLEPPSAEEMKELREELVDFHGEMVLLENFSRLNYT  121 (310)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--------ccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            999999999999999999999999999999998761        011122467889999999999999999999999999


Q ss_pred             HHHHHHhhhhhhcCCCCchhHHHHhhcCCCCChHHHHHHHHHHHHHHHHHhhhhHHhhhccCCCCCCccccc--cccc-c
Q 020930          161 GLLKILKKYDKRTGGLLRQPFTQLAVHQPFFTTESLTRLVHECEENLELLFPLEAEVIEATATTPDESKSQL--NAAN-T  237 (319)
Q Consensus       161 gf~KILKK~DK~tg~~l~~~fl~~V~~qpF~~~~~l~~Lv~~~e~~l~~L~~~~~~~~~~~~~~~~~~~~~~--~~~~-~  237 (319)
                      ||+||||||||+||..++.+|.++|..+|||+++.+.+||.+|+.+++.++|....   ..+...++. ..+  .+.. .
T Consensus       122 Gf~KILKK~DKrtg~~l~~~f~~~l~~~Pf~~~e~~~~Lv~e~~~l~~~l~~~~~~---~~s~~~~~~-~~~~~t~k~wv  197 (310)
T KOG1161|consen  122 GFAKILKKHDKRTGYRLRPYFQVRLLHQPFFTTEQLFRLVYEISILLDLLRPSNRN---GESKESNDS-DFVRRTTKYWV  197 (310)
T ss_pred             HHHHHHHHHhcccccccccHHHHHHHhCCCchhhhHHHHHHHHHHHHHHhcccccc---cccccccch-hhhhhcccccc
Confidence            99999999999999999999999999999999999999999999999999987654   111111100 000  0000 0


Q ss_pred             CCCCCcc---chHH-HH-HHHHH-HHHHHHHHHHhhccCCccCCCCCCccccCCCc
Q 020930          238 LSDNPPN---LRDE-TL-DVYRS-TLAAMKAIKGLRKASSTSNPLSFSSLFESLDD  287 (319)
Q Consensus       238 ~~d~~~~---~~~~-~~-~~~~~-t~aal~~~~~~~~~~st~~~~s~~~~~~~~~~  287 (319)
                      .++....   .+.. +. -+|.+ |++||.|+...++++++|+.|++||+..++.+
T Consensus       198 H~~n~~e~k~~~~~~lpvL~~~~~~d~ait~~~~~n~~~~~y~~~l~~~~~a~~~r  253 (310)
T KOG1161|consen  198 HEDNVNEVKTYILRHLPVLVFNSPTDAAITTLYFDNSGSDLYSQFLLKSLLAEALR  253 (310)
T ss_pred             CccccchhHHHHhccCcceecCCcchHHHHHHHHhccchHHHHHHhcccccchhhh
Confidence            1111100   0000 01 12333 99999999999999999999999999999885



>PF03105 SPX: SPX domain; InterPro: IPR004331 The SPX domain is named after SYG1/Pho81/XPR1 proteins Back     alignment and domain information
>KOG1162 consensus Predicted small molecule transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG5036 SPX domain-containing protein involved in vacuolar polyphosphate accumulation [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG5408 SPX domain-containing protein [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-10
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 59.5 bits (143), Expect = 5e-10
 Identities = 56/359 (15%), Positives = 114/359 (31%), Gaps = 107/359 (29%)

Query: 6   EFTTHLKETLPEWRDKFLCYKPLKKLLKHFPAADFQPHSQPTPT---VDVVVIIDDDHNR 62
           E     K+ L  + D F+          +F   D Q   +   +   +D +++  D  + 
Sbjct: 13  EHQYQYKDILSVFEDAFV---------DNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG 63

Query: 63  TGSSSSNCWSLDRLQDWFVRILREELEKFNDFYIDKEEEFVI-RFQ-ELKDR---IERVK 117
           T           RL    +    E ++KF +  +    +F++   + E +          
Sbjct: 64  T----------LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI 113

Query: 118 EKTGGAFTSESEFS-------EEMMEIRK--------DFVTIHGEM------VL----LK 152
           E+    +     F+       +  +++R+          V I G +       +      
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG-VLGSGKTWVALDVCL 172

Query: 153 NYSS----------LNFA------GLLKILKKYDKRTGGLLRQPFTQLAVHQPFFTTESL 196
           +Y            LN         +L++L+K   +    +   +T  + H     + ++
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ----IDPNWTSRSDH-----SSNI 223

Query: 197 TRLVHECEENLELLFPLE--------------AEVIEA-------TATTPDESKS-QLNA 234
              +H  +  L  L   +              A+   A         TT  +  +  L+A
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSA 283

Query: 235 ANT----LSDNPPNL-RDETLDVYRSTLAAMKAIKGLRKASSTSNPLSFSSLFESLDDE 288
           A T    L  +   L  DE   +    L   +  + L +   T+NP   S + ES+ D 
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLD-CR-PQDLPREVLTTNPRRLSIIAESIRDG 340


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00