Citrus Sinensis ID: 020939

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MRSCSSFQRHSQSHLGHFRARRSSSLIVAKTSCRFRSGSLSPELNGSKSNVSRTHGYQLQYTAVQVGAFNDDFDIASFDNWSDDEGTVGYMVSSSEGEESDGEIVLNSISDTDLPSVFVSNNDALTLTAHRLAMIGRARRRHRIKLGLFINLGLITFLTVLLLFVDWCAWKIVRLPLAPFYLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWLDATSIPSPYGMYSFL
Secondary Structure (PSIPRED)
cccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccEEEEEEccccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEHHHHccHHHHHHcccccccccEcccccccccccccccccccccEEEEEccccccccEEEEEEEccccccccccccccccccccEEEEcccccccccccEEEEcccccccccEEccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHcHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccEEccccccHHHcccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
mrscssfqrhsqSHLGHFRARRSSSLIvaktscrfrsgslspelngsksnvsrthgyqLQYTAVQvgafnddfdiasfdnwsddegtvgymvsssegeesdgeivlnsisdtdlpsvfvsnndalTLTAHRLAMIGRARRRHRIKLGLFINLGLITFLTVLLLFVDWCAWKivrlplapfyltrpfFISAVLVSCAGYICVPLLKSLKIRQIIRkegparhsrkgrtptmgglffVPIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLvknhssglsaWSRLILEVAVGTWFSFwldatsipspygmysfl
Flexible Loop (DISEMBL)
mrscssfqrhsqshlghfrarrssSLIVAKTscrfrsgslspelngsksnvsRTHGYQLQYTAVQVGAFNDDFDIASFDNWSDDEGTVGYMVSSSEGEESDGEIVLNSISDTDLPSVFVSNNDALTLTAHRLAMIGRARRRHRIKLGLFINLGLITFLTVLLLFVDWCAWKIVRLPLAPFYLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIrkegparhsrkgrtptmgGLFFVPIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWLDATSIPSPYGMYSFL
Low Complexity Region (SEG)
MRSCSSFQRHSQSHLGHFRARRSSSLIVAKTSCRFRSGSLSPELNGSKSNVSRTHGYQLQYTAVQVGAFNDDFDIASFDNWSDDEGTVGYMVsssegeesdgeIVLNSISDTDLPSVFVSNNDALTLTAHRLAMIGRARRRHRIKLGLFINlglitfltvlllfvDWCAWKIVRLPLAPFYLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVsgasaatlaialigliDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWLDATSIPSPYGMYSFL
Disordered region (IsUnstruct)
*****************************************************THGYQLQYTAVQVGAFNDDFDIASFDNWSDDEGTVGYM************IVLNSISDTDLPSVFVSNNDALTLTAHRLAMIGRARRRHRIKLGLFINLGLITFLTVLLLFVDWCAWKIVRLPLAPFYLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIR**************TMGGLFFVPIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWLDATSIPSPYG*****
Disordered Region (DISOPRED)
*********HSQSHLGHFRARRSSSLI***********************************AVQVGAFNDDFDIASFDNWSDDEGTVG*************EIVLNSISDTDLPSVFVSNNDALTLTAHRLAMIG*******IKLGLFINLGLITFLTVLLLFVDWCAWKIVRLPLAPFYLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWLDATSIPSPYGMYSFL
Disordered Region (DISEMBL)
******************RARRSSSLIVAKTSCRFRSGSLSPELNGSKSNVSRTHGYQLQYTAVQVGAFNDDFDIASFDNWSDDEGTVGYMV**********EIVLNSISDTDLPSVFVSNNDALTLTAHRLAMIGRARRRHRIKLGLFINLGLITFLTVLLLFVDWCAWKIVRLPLAPFYLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRK**********RTPTMGGLFFVPIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWLDATSIPSPYGMYSFL
Disordered Region (DISPRO)
****SSFQRHSQSHLGHFRARRSSSLIVAKTSCRFRSGSLSPELNGSKSNVSRTHGYQLQYTAVQVGAFNDDFDIASFDNWSDDEGTVGYMVSSSEGEESDGEIVLNSISDTDLPSVFVSNNDALTLTAHRLAMIGRARRRHRIKLGLFINLGLITFLTVLLLFVDWCAWKIVRLPLAPFYLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWLDATSIPSPYGMYSFL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRSCSSFQRHSQSHLGHFRARRSSSLIVAKTSCRFRSGSLSPELNGSKSNVSRTHGYQLQYTAVQVGAFNDDFDIASFDNWSDDEGTVGYMVSSSEGEESDGEIVLNSISDTDLPSVFVSNNDALTLTAHRLAMIGRARRRHRIKLGLFINLGLITFLTVLLLFVDWCAWKIVRLPLAPFYLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWLDATSIPSPYGMYSFL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	319	2.2.26 [Sep-21-2011]
O49730	480	Phospho-N-acetylmuramoyl-	yes	no	0.815	0.541	0.470	2e-55
Q8YP83	369	Phospho-N-acetylmuramoyl-	yes	no	0.476	0.411	0.370	2e-19
Q3MDP5	367	Phospho-N-acetylmuramoyl-	yes	no	0.476	0.414	0.370	3e-19
B0BZI7	371	Phospho-N-acetylmuramoyl-	yes	no	0.445	0.382	0.36	5e-19
B1XNS2	365	Phospho-N-acetylmuramoyl-	yes	no	0.385	0.336	0.403	2e-18
B2J5G4	363	Phospho-N-acetylmuramoyl-	yes	no	0.407	0.358	0.374	3e-18
Q8DK95	378	Phospho-N-acetylmuramoyl-	yes	no	0.416	0.351	0.408	7e-18
B7KDB2	365	Phospho-N-acetylmuramoyl-	yes	no	0.492	0.430	0.329	1e-17
B7JVF4	364	Phospho-N-acetylmuramoyl-	yes	no	0.363	0.318	0.421	2e-16
Q3AVL6	368	Phospho-N-acetylmuramoyl-	yes	no	0.410	0.355	0.359	8e-15

>sp|O49730|MRAY_ARATH Phospho-N-acetylmuramoyl-pentapeptide-transferase homolog OS=Arabidopsis thaliana GN=ATTRANS 11 PE=2 SV=3

 Score =  216 bits (549), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/289 (47%), Positives = 183/289 (63%), Gaps = 29/289 (10%)

Query: 35  FRSGSLSPELNGSKSNVSRTHGYQLQYTA--------VQVGAFNDDFDIASFDNWSDDEG 86
           FRS    P L+ S+  +        +++A        V V AF+DD    +FD ++ D  
Sbjct: 19  FRSLESIPPLSNSRYRIESGSPSSFKFSAPSLQRHSSVSVKAFDDD----TFDFYTGDIF 74

Query: 87  TVGYMVSSSEGEESDGEIVLNSISDTDLPSVFVSNNDALTLTAHRLAMIGRARRRHRIKL 146
              Y +SSSEGEESDG+  LN +++T               TA +L    R R++HRI+ 
Sbjct: 75  AATYAISSSEGEESDGDYALNVVTET---------------TAQKLGKFPRGRKKHRIRY 119

Query: 147 GLFINLGLITFLTVLLLFVDWCAWKIVRLPLAPFYLTRPFFISAVLVSCAGYICVPLLKS 206
           G  INLGL+ FL++LLL +D  AWKIVRLPL P++L+ PFF SA+LV+ AGYI VPLL  
Sbjct: 120 G--INLGLLAFLSLLLLLMDSFAWKIVRLPLPPYFLSMPFFTSAILVTLAGYIFVPLLDR 177

Query: 207 LKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGASAATLAIAL 266
           L++ + IR  GP  H+R+   PTMGGLFFVPIG+ V IA    SS++V GA+AAT+A A 
Sbjct: 178 LRVHEPIRTLGPVPHNRRPTIPTMGGLFFVPIGVVVAIALNKVSSIEVLGAAAATVAFAA 237

Query: 267 IGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWLDATSIPSPYGM 315
           IGLIDD + L   +++GLSA  +L+LE AVGT F+FWL+  S+ SPYGM
Sbjct: 238 IGLIDDSLSLYSENNNGLSAKIQLLLEAAVGTCFAFWLETASLSSPYGM 286

May be involved in glycosylation events.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8YP83|MRAY_NOSS1 Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=mraY PE=3 SV=1

 Score = 97.1 bits (240), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 10/162 (6%)

Query: 158 LTVLLLFVDWCAWKIVRLPLAPFYLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEG 217
           L +  L +DW A    R P     LT P  +  +  + AGY  VPLL++LK  QIIR++G
Sbjct: 26  LGIAALTLDWMA---NRNPWQGTSLTLPLLLCTIASAIAGYFVVPLLQALKTGQIIREDG 82

Query: 218 PARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLV 277
           P  H +K  TPTMGG+FF+P+ +        F++ +V   SA TL+  LIG IDD   L 
Sbjct: 83  PQAHLKKAGTPTMGGIFFIPVAVVGACVLSNFAT-EVLAVSALTLSYGLIGWIDDWQILR 141

Query: 278 KNHSSGLSAWSRLILEVAVGTWFSFWL------DATSIPSPY 313
           +  + G+S   +L L++     F  WL      + TSI  P+
Sbjct: 142 RKSNKGISPRMKLALQIGFAAAFCLWLMFNQPANITSIALPW 183

First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan.

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

EC: 2

EC: .

EC: 7

EC: .

EC: 8

EC: .

EC: 1

EC: 3

>sp|Q3MDP5|MRAY_ANAVT Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=mraY PE=3 SV=1

 Score = 95.9 bits (237), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 10/162 (6%)

Query: 158 LTVLLLFVDWCAWKIVRLPLAPFYLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEG 217
           L +  L +DW A    R P     LT P  +  +  + AGY  VPLL++LK  QIIR++G
Sbjct: 26  LGIAALTLDWIA---NRNPWQGTSLTLPLLLCTIASAIAGYFVVPLLQALKTGQIIREDG 82

Query: 218 PARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLV 277
           P  H +K  TPTMGG+FF+P+ +        F++ +V   SA TL+  LIG IDD   L 
Sbjct: 83  PQAHLKKAGTPTMGGIFFIPVAVVGACVLSNFAT-EVLAVSALTLSYGLIGWIDDWQILR 141

Query: 278 KNHSSGLSAWSRLILEVAVGTWFSFWL------DATSIPSPY 313
           +  + G+S   +L L++     F  WL      + TSI  P+
Sbjct: 142 RKSNKGISPRMKLALQICFAAAFCLWLMFNQPANITSIALPW 183

First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan.

Anabaena variabilis (strain ATCC 29413 / PCC 7937) (taxid: 240292)

EC: 2

EC: .

EC: 7

EC: .

EC: 8

EC: .

EC: 1

EC: 3

>sp|B0BZI7|MRAY_ACAM1 Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Acaryochloris marina (strain MBIC 11017) GN=mraY PE=3 SV=1

 Score = 95.5 bits (236), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 85/150 (56%), Gaps = 8/150 (5%)

Query: 174 RLPLAPFYLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGL 233
           R+      +  P + S ++V+  G+  VP+L+SLK  Q+I+++GP  H +K  TPTMGG+
Sbjct: 40  RIDTPALTIVAPLWTSTLVVTLLGFWAVPMLRSLKASQVIQEDGPQSHLKKAGTPTMGGI 99

Query: 234 FFVPIGIAVTIATVGFSS---LQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRL 290
           FF+P+ + +  A V  +S   L+VS A   TL + L+G  DD   L K  + G+SA  RL
Sbjct: 100 FFMPVALVLGWAWVAANSVNLLEVSAAVLLTLCLGLVGWFDDWQILRKKSNKGISAKLRL 159

Query: 291 ILEVAVGTWFSFWL-----DATSIPSPYGM 315
            +E+  G  F  WL     D + +  P+G+
Sbjct: 160 GIELGSGLIFGLWLFLTRSDISGLALPFGL 189

First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan.

Acaryochloris marina (strain MBIC 11017) (taxid: 329726)

EC: 2

EC: .

EC: 7

EC: .

EC: 8

EC: .

EC: 1

EC: 3

>sp|B1XNS2|MRAY_SYNP2 Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=mraY PE=3 SV=1

 Score = 93.6 bits (231), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 1/124 (0%)

Query: 185 PFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTI 244
           P  +SA++    G   VPLL+ LK  QIIR+EGP  H +K  TPTMGGL F+P+G+A  +
Sbjct: 52  PVLVSAIVAGIFGMWIVPLLRRLKTGQIIREEGPQAHLKKAGTPTMGGLIFLPVGLAAGV 111

Query: 245 ATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWL 304
              GF    ++  +  TLA  +IG +DD   L    + G+S   +LIL++A+   F  WL
Sbjct: 112 IFAGFDPEAIA-VALVTLAYGVIGWVDDWQVLRLKSNKGISPRMKLILQIAIAVVFCIWL 170

Query: 305 DATS 308
             T+
Sbjct: 171 ALTA 174

First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan.

Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (taxid: 32049)

EC: 2

EC: .

EC: 7

EC: .

EC: 8

EC: .

EC: 1

EC: 3

>sp|B2J5G4|MRAY_NOSP7 Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=mraY PE=3 SV=1

 Score = 92.8 bits (229), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 73/131 (55%), Gaps = 1/131 (0%)

Query: 174 RLPLAPFYLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGL 233
           RLP     LT P  + A+     G+  +PLL++LK  QIIR++GP  H +K  TPTMGG+
Sbjct: 39  RLPWQSMSLTLPLLLCAMGSGVVGFWVIPLLQALKTGQIIREDGPQAHLKKAGTPTMGGI 98

Query: 234 FFVPIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILE 293
           FF+P+G+ +      F++  V   SA T +   IG +DD   L +  + G+S  ++L L+
Sbjct: 99  FFIPVGVIIACILSNFAT-DVLAVSALTTSYGFIGWLDDWQILRRKSNKGISPRTKLALQ 157

Query: 294 VAVGTWFSFWL 304
           V     F  WL
Sbjct: 158 VGFAAVFCLWL 168

First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan.

Nostoc punctiforme (strain ATCC 29133 / PCC 73102) (taxid: 63737)

EC: 2

EC: .

EC: 7

EC: .

EC: 8

EC: .

EC: 1

EC: 3

>sp|Q8DK95|MRAY_THEEB Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Thermosynechococcus elongatus (strain BP-1) GN=mraY PE=3 SV=1

 Score = 91.7 bits (226), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 77/142 (54%), Gaps = 9/142 (6%)

Query: 182 LTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIA 241
           LT P+ +S  LV+  G   VPLL+ LK  QIIR++GP  H +K  TPTMGG+FFVP G+ 
Sbjct: 55  LTLPWLVSFALVAVLGMAVVPLLRRLKTGQIIREDGPQSHLQKSGTPTMGGIFFVPTGLG 114

Query: 242 VTIATVGFSSLQVSGASAA----TLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVG 297
           +     GF+  ++S    A     L  A IG  DD   L +  + GLSA  RL+LE    
Sbjct: 115 LAFLWTGFAQGKLSPTVGAIALLVLWYAAIGWWDDWQVLRRQSNKGLSARLRLLLEGIGA 174

Query: 298 TWFSFWL-----DATSIPSPYG 314
             F  WL      AT + +P+G
Sbjct: 175 ALFCAWLVASDPTATVVTAPWG 196

First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan.

Thermosynechococcus elongatus (strain BP-1) (taxid: 197221)

EC: 2

EC: .

EC: 7

EC: .

EC: 8

EC: .

EC: 1

EC: 3

>sp|B7KDB2|MRAY_CYAP7 Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Cyanothece sp. (strain PCC 7424) GN=mraY PE=3 SV=1

 Score = 90.9 bits (224), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 1/158 (0%)

Query: 154 LITFLTVLLLFVDWCAWKIVRLPLAPFYLTRPFFISAVLVSCAGYICVPLLKSLKIRQII 213
           LI    VL L +    W +       + +  P  +SA+     G+  +PLL+ LK  Q +
Sbjct: 20  LILLTVVLFLLMTLFQWLLTSSLEGIYAVILPVSVSAIACGLLGFGVIPLLRWLKTGQFV 79

Query: 214 RKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDV 273
           R++GP  H +K  TPTMGG+FF+P+ + V +    F   QV      TLA  +IG +DD 
Sbjct: 80  REDGPQSHLKKAGTPTMGGIFFIPVAVGVALIGSKFDP-QVVAVGIVTLAYMMIGWVDDW 138

Query: 274 ICLVKNHSSGLSAWSRLILEVAVGTWFSFWLDATSIPS 311
             L +  + G+S   +L+L++AV   F  W+  T  P+
Sbjct: 139 QVLRQKSNKGISPKMKLLLQIAVAVLFCLWMLWTGSPN 176

First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan.

Cyanothece sp. (strain PCC 7424) (taxid: 65393)

EC: 2

EC: .

EC: 7

EC: .

EC: 8

EC: .

EC: 1

EC: 3

>sp|B7JVF4|MRAY_CYAP8 Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Cyanothece sp. (strain PCC 8801) GN=mraY PE=3 SV=1

 Score = 86.7 bits (213), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/121 (42%), Positives = 73/121 (60%), Gaps = 5/121 (4%)

Query: 185 PFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTI 244
           P  +SA+  +  GY+ VP+L+ LK  Q+I+++GP  H +K  TPTMGG+FFVP  +AV I
Sbjct: 50  PLAVSAICSAILGYVVVPVLRRLKAGQVIQEDGPQTHLKKAGTPTMGGIFFVP--VAVII 107

Query: 245 ATVGFSSLQ--VSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSF 302
           A + +S L   V   S  TLA   IG IDD   L +  + GL+   +LIL++A+   F  
Sbjct: 108 ALI-WSKLDPAVLAVSIVTLAYMGIGWIDDWQILRQKSNKGLTPRMKLILQIAIAVGFCI 166

Query: 303 W 303
           W
Sbjct: 167 W 167

First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan.

Cyanothece sp. (strain PCC 8801) (taxid: 41431)

EC: 2

EC: .

EC: 7

EC: .

EC: 8

EC: .

EC: 1

EC: 3

>sp|Q3AVL6|MRAY_SYNS9 Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Synechococcus sp. (strain CC9902) GN=mraY PE=3 SV=1

 Score = 81.3 bits (199), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 80/142 (56%), Gaps = 11/142 (7%)

Query: 182 LTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIA 241
           LT P  ++AV+      + +P LK+LK+ Q+IR+EGP+ H  K  TPTMGGL  VP+G+ 
Sbjct: 42  LTLPLLLAAVVSMAVAGLGIPRLKALKMGQVIREEGPSGHQSKSGTPTMGGLLVVPVGVI 101

Query: 242 VT--IATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILE------ 293
           +   I     +S Q+   S  TLA  LIG  DD   L +  ++GL+   +L+L+      
Sbjct: 102 LGSWITREPEASQQLLAVSGVTLAYMLIGGFDDWRSLTRRTNTGLTPRGKLLLQTTAAFV 161

Query: 294 -VAVGTWFSFWLDATSIPSPYG 314
            +A+  W   W++ +S+  P+G
Sbjct: 162 FLAIAAW-QGWIN-SSVALPFG 181

First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan.

Synechococcus sp. (strain CC9902) (taxid: 316279)

EC: 2

EC: .

EC: 7

EC: .

EC: 8

EC: .

EC: 1

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
225463476	545	PREDICTED: phospho-N-acetylmuramoyl-pent	0.956	0.559	0.560	9e-90
297740678	689	unnamed protein product [Vitis vinifera]	0.774	0.358	0.637	1e-88
449459352	521	PREDICTED: phospho-N-acetylmuramoyl-pent	0.912	0.558	0.540	4e-85
255583559	503	phospho-n-acetylmuramoyl-pentapeptide-tr	0.890	0.564	0.571	5e-84
356546494	562	PREDICTED: phospho-N-acetylmuramoyl-pent	0.802	0.455	0.582	7e-82
357447343	456	Phospho-N-acetylmuramoyl-pentapeptide-tr	0.796	0.557	0.567	5e-75
357447341	508	Phospho-N-acetylmuramoyl-pentapeptide-tr	0.796	0.5	0.567	5e-75
356557821	510	PREDICTED: phospho-N-acetylmuramoyl-pent	0.777	0.486	0.602	9e-73
240255997	480	phospho-N-acetylmuramoyl-pentapeptide-tr	0.815	0.541	0.470	1e-53
414875748	505	TPA: hypothetical protein ZEAMMB73_48218	0.802	0.506	0.431	3e-51

>gi|225463476|ref|XP_002273074.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase homolog [Vitis vinifera]

 Score =  336 bits (861), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 180/321 (56%), Positives = 225/321 (70%), Gaps = 16/321 (4%)

Query: 3   SCSSFQRHSQSHLGHFRARR----SSSLIVAKTSCRFRSGSLSPELNGSKSNVSRTHGYQ 58
           S +  Q +S S L     R     SS       S RFRS SL   LN       R +G++
Sbjct: 39  SITVMQSYSLSTLSFLLPRHRLSLSSPFRFPSDSRRFRSCSLK-LLN------VRINGHE 91

Query: 59  LQYTAVQVGAFND-DFDIASFDNWSDDEGTVGYMVSSSEGEESDGEIVLNSISDTDLPSV 117
            +   +++ A ++   DI+S D+W D+EG  G M+ SS+ E+SDGEI++N +SD DL + 
Sbjct: 92  SRRRLLRIRAMDEGSMDISSLDDWGDNEGIAGNMLPSSDSEDSDGEIIINPVSDIDLATS 151

Query: 118 ---FVSNNDALTLTAHRLAMIGRARRRHRIKLGLFINLGLITFLTVLLLFVDWCAWKIVR 174
               VS+NDALT+ AHR AMIG+ R+++RIK G+ +N GLITFLT+LLL VD CAW+IVR
Sbjct: 152 NERLVSSNDALTMAAHRFAMIGKGRKKNRIKYGILVNAGLITFLTMLLLLVDSCAWRIVR 211

Query: 175 LPLAPFYLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLF 234
           LPL PFYLTRPFFIS VLVS  GYICVPLL  LK+ Q++RKEGP RHS K RTPTMGGLF
Sbjct: 212 LPLEPFYLTRPFFISTVLVSGVGYICVPLLHGLKMHQLLRKEGPVRHSSKRRTPTMGGLF 271

Query: 235 FVPIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEV 294
           FVPIGI V   ++ FSS++VS  + ATLA A IGL DDV+  VKNH+SGLSAW R++LEV
Sbjct: 272 FVPIGIVVA-KSMCFSSIEVSRVATATLAFAAIGLFDDVLSHVKNHNSGLSAWIRILLEV 330

Query: 295 AVGTWFSFWLDATSIPSPYGM 315
           A GTWFSFWLD T++ SPY M
Sbjct: 331 AAGTWFSFWLDTTNMSSPYCM 351

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740678|emb|CBI30860.3| unnamed protein product [Vitis vinifera]

 Score =  332 bits (852), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 160/251 (63%), Positives = 195/251 (77%), Gaps = 4/251 (1%)

Query: 68  AFNDDFDIASFDNWSDDEGTVGYMVSSSEGEESDGEIVLNSISDTDLPSV---FVSNNDA 124
           +     DI+S D+W D+EG  G M+ SS+ E+SDGEI++N +SD DL +     VS+NDA
Sbjct: 79  SLKGSMDISSLDDWGDNEGIAGNMLPSSDSEDSDGEIIINPVSDIDLATSNERLVSSNDA 138

Query: 125 LTLTAHRLAMIGRARRRHRIKLGLFINLGLITFLTVLLLFVDWCAWKIVRLPLAPFYLTR 184
           LT+ AHR AMIG+ R+++RIK G+ +N GLITFLT+LLL VD CAW+IVRLPL PFYLTR
Sbjct: 139 LTMAAHRFAMIGKGRKKNRIKYGILVNAGLITFLTMLLLLVDSCAWRIVRLPLEPFYLTR 198

Query: 185 PFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTI 244
           PFFIS VLVS  GYICVPLL  LK+ Q++RKEGP RHS K RTPTMGGLFFVPIGI V  
Sbjct: 199 PFFISTVLVSGVGYICVPLLHGLKMHQLLRKEGPVRHSSKRRTPTMGGLFFVPIGIVVA- 257

Query: 245 ATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWL 304
            ++ FSS++VS  + ATLA A IGL DDV+  VKNH+SGLSAW R++LEVA GTWFSFWL
Sbjct: 258 KSMCFSSIEVSRVATATLAFAAIGLFDDVLSHVKNHNSGLSAWIRILLEVAAGTWFSFWL 317

Query: 305 DATSIPSPYGM 315
           D T++ SPY M
Sbjct: 318 DTTNMSSPYCM 328

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459352|ref|XP_004147410.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase homolog [Cucumis sativus] gi|449527335|ref|XP_004170667.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase homolog [Cucumis sativus]

 Score =  320 bits (821), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 161/298 (54%), Positives = 207/298 (69%), Gaps = 7/298 (2%)

Query: 22  RSSSLIVAKTSCRFRSGSLSPELNGSKSNVSRTHGYQLQYTAVQVGAFNDD---FDIASF 78
            + ++I +   C + +      L   K + +R H      +  +V AF+ D   FDI S 
Sbjct: 33  HTRTIINSSMMCFYANSYYDVNLRVPKVHKTRRHR---TCSVTEVRAFDQDSFDFDIPSL 89

Query: 79  DNWSDDEGT-VGYMVSSSEGEESDGEIVLNSISDTDLPSVFVSNNDALTLTAHRLAMIGR 137
           D++SD+EGT  G+ + SS+GE+SD EI+LN +SD DLP+V V +NDALT+TAHR+AM+ R
Sbjct: 90  DHFSDNEGTGTGFGLPSSDGEDSDPEIILNPVSDVDLPAVSVQHNDALTVTAHRMAMLSR 149

Query: 138 ARRRHRIKLGLFINLGLITFLTVLLLFVDWCAWKIVRLPLAPFYLTRPFFISAVLVSCAG 197
            R ++RI+ GLF N GLI FL +LLL+VDWCAW+ VRLPL PF++T PF  SA L SCAG
Sbjct: 150 GRHKYRIRHGLFTNTGLIAFLMILLLYVDWCAWRTVRLPLGPFHMTGPFLTSACLASCAG 209

Query: 198 YICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGA 257
           YICVPLL   K  QI R+E P RH+ K +TPTMGGLFFVPIGI V     GFSS +VSGA
Sbjct: 210 YICVPLLYQFKAYQISRQERPVRHALKRKTPTMGGLFFVPIGIVVAKHFAGFSSTEVSGA 269

Query: 258 SAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWLDATSIPSPYGM 315
           S ATLA   IGL+DD++ L+K+   GLSAW +++L+VAVG WFSFWL   SI SPY M
Sbjct: 270 SVATLAFFAIGLVDDILSLIKSRKYGLSAWIKILLQVAVGIWFSFWLQDASISSPYSM 327

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255583559|ref|XP_002532536.1| phospho-n-acetylmuramoyl-pentapeptide-transferase, putative [Ricinus communis] gi|223527748|gb|EEF29852.1| phospho-n-acetylmuramoyl-pentapeptide-transferase, putative [Ricinus communis]

 Score =  317 bits (812), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 167/292 (57%), Positives = 212/292 (72%), Gaps = 8/292 (2%)

Query: 32  SCRFRSGSLSPE-LNGSKSNVS--RTHGYQLQYTAVQVGAFNDD-FDIASFDNWSDDE-- 85
           S R R   L+P   + S  NVS  R  G++LQ   VQ+ AF++D F ++S D+W+D+E  
Sbjct: 18  SLRKRFSLLTPNSFHRSTLNVSNARKRGWRLQSRIVQIRAFDEDSFGVSSLDDWADNETS 77

Query: 86  -GTVGYMVSSSEGEESDGEIVLNSISDTDLPSVFVSNNDALTLTAHRLAMIGRARRRHRI 144
               GY++SSS+GE+SDG+ VLN ++D DLPS  VSNND+LT+TAHRLA+I + RR+H +
Sbjct: 78  AAIAGYLISSSDGEDSDGDYVLNPVADIDLPSASVSNNDSLTVTAHRLAIIAKERRKHMM 137

Query: 145 KLGLFINLGLITFLTVLLLFVDWCAWKIVRLPLAPFYLTRPFFISAVLVSCAGYICVPLL 204
           + G+F NLGLI FL  LL FVDWCAWKIVRLPLAPF+L+RPFFI+  L S AGYI VP L
Sbjct: 138 RQGIFNNLGLIGFLMFLLFFVDWCAWKIVRLPLAPFHLSRPFFIAIALSSIAGYISVPFL 197

Query: 205 KSLKIRQIIRKE-GPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGASAATLA 263
            +LK+ Q   K   P RHS+K  TPTMGGLFF+PIG+ V     GFSS++VSGA+ ATLA
Sbjct: 198 NALKVHQTTSKRVRPVRHSKKRATPTMGGLFFIPIGVGVAKFIAGFSSVEVSGAAVATLA 257

Query: 264 IALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWLDATSIPSPYGM 315
            A IGL DD++  VKNH  GL AW +L LE+AVGT F+ WL++TSI SPY M
Sbjct: 258 FAAIGLFDDILSQVKNHKKGLPAWIKLFLEIAVGTLFALWLESTSISSPYSM 309

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546494|ref|XP_003541661.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase homolog [Glycine max]

 Score =  310 bits (793), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 149/256 (58%), Positives = 191/256 (74%)

Query: 60  QYTAVQVGAFNDDFDIASFDNWSDDEGTVGYMVSSSEGEESDGEIVLNSISDTDLPSVFV 119
           +Y+   + A  D FDI   D W  D+ +  YM+SSS+GE+SDGEI L  ++D DLPSV  
Sbjct: 114 RYSVEVLDALKDSFDIPMLDYWDADDNSSAYMLSSSDGEDSDGEIFLTPVNDLDLPSVSA 173

Query: 120 SNNDALTLTAHRLAMIGRARRRHRIKLGLFINLGLITFLTVLLLFVDWCAWKIVRLPLAP 179
           SNNDALT+ AHR A +GR R++ R KLG+FI +GLI  LT+LLL+VDWCAW+IVRLPL+P
Sbjct: 174 SNNDALTVAAHRFANLGRGRKKSRTKLGIFITMGLIIVLTLLLLYVDWCAWRIVRLPLSP 233

Query: 180 FYLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIG 239
           FYLTRPF ISA+LVS  GY+CVP+ +  KI  +I+K+GPARH  K  TPT+GGL F+P+G
Sbjct: 234 FYLTRPFLISAILVSFVGYVCVPIFRHFKIIHVIKKQGPARHHMKKTTPTLGGLLFIPVG 293

Query: 240 IAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTW 299
           + V     G SS++VSGA+ AT+  A +GL+ D++ L KNH  GL A + ++LEVAVGTW
Sbjct: 294 VVVAHVFAGSSSIEVSGAAGATIGFAAVGLLSDILSLTKNHWRGLPALTEVLLEVAVGTW 353

Query: 300 FSFWLDATSIPSPYGM 315
           FSFWLD TSI SPYGM
Sbjct: 354 FSFWLDITSISSPYGM 369

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357447343|ref|XP_003593947.1| Phospho-N-acetylmuramoyl-pentapeptide-transferase [Medicago truncatula] gi|355482995|gb|AES64198.1| Phospho-N-acetylmuramoyl-pentapeptide-transferase [Medicago truncatula]

 Score =  287 bits (734), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 147/259 (56%), Positives = 180/259 (69%), Gaps = 5/259 (1%)

Query: 64  VQVGAFNDD-FDIASFDNWSDDEGTVGYMVSSSEGEESDGEIVLNSISDTDLPSVFVS-- 120
           V  GAF+DD F    FD+WS +E T     SSS+GE+ DG+I L  + D DLPS   S  
Sbjct: 64  VSTGAFDDDSFHFPIFDDWSPEEST--SYASSSDGEDFDGDIFLTPVHDVDLPSASASAS 121

Query: 121 NNDALTLTAHRLAMIGRARRRHRIKLGLFINLGLITFLTVLLLFVDWCAWKIVRLPLAPF 180
           N DALT+ AHRL  IGR  ++H IKLG+FI +GLI  +TVLLL+VDWC WKIVRLPL+PF
Sbjct: 122 NKDALTVAAHRLVTIGRGHKKHSIKLGIFITMGLIIGMTVLLLYVDWCVWKIVRLPLSPF 181

Query: 181 YLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGI 240
           YLTRPF ISA+LVS AGY+ VP+ +  K   +I+++ P RH  K RTPT+GGLFFVPIGI
Sbjct: 182 YLTRPFLISAILVSFAGYVFVPIFRHFKAIHVIKQQWPLRHHLKRRTPTLGGLFFVPIGI 241

Query: 241 AVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWF 300
            V       SS++VSGAS  T+A A +GL+ D++ L KNH  GL A   +  EVAVG  F
Sbjct: 242 IVANVIADTSSIEVSGASGVTIAFAAVGLLSDILNLTKNHWRGLPALVEVFSEVAVGGCF 301

Query: 301 SFWLDATSIPSPYGMYSFL 319
           SFWLD TSI SPYGM + L
Sbjct: 302 SFWLDITSISSPYGMKTLL 320

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357447341|ref|XP_003593946.1| Phospho-N-acetylmuramoyl-pentapeptide-transferase [Medicago truncatula] gi|355482994|gb|AES64197.1| Phospho-N-acetylmuramoyl-pentapeptide-transferase [Medicago truncatula]

 Score =  287 bits (734), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 147/259 (56%), Positives = 180/259 (69%), Gaps = 5/259 (1%)

Query: 64  VQVGAFNDD-FDIASFDNWSDDEGTVGYMVSSSEGEESDGEIVLNSISDTDLPSVFVS-- 120
           V  GAF+DD F    FD+WS +E T     SSS+GE+ DG+I L  + D DLPS   S  
Sbjct: 64  VSTGAFDDDSFHFPIFDDWSPEEST--SYASSSDGEDFDGDIFLTPVHDVDLPSASASAS 121

Query: 121 NNDALTLTAHRLAMIGRARRRHRIKLGLFINLGLITFLTVLLLFVDWCAWKIVRLPLAPF 180
           N DALT+ AHRL  IGR  ++H IKLG+FI +GLI  +TVLLL+VDWC WKIVRLPL+PF
Sbjct: 122 NKDALTVAAHRLVTIGRGHKKHSIKLGIFITMGLIIGMTVLLLYVDWCVWKIVRLPLSPF 181

Query: 181 YLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGI 240
           YLTRPF ISA+LVS AGY+ VP+ +  K   +I+++ P RH  K RTPT+GGLFFVPIGI
Sbjct: 182 YLTRPFLISAILVSFAGYVFVPIFRHFKAIHVIKQQWPLRHHLKRRTPTLGGLFFVPIGI 241

Query: 241 AVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWF 300
            V       SS++VSGAS  T+A A +GL+ D++ L KNH  GL A   +  EVAVG  F
Sbjct: 242 IVANVIADTSSIEVSGASGVTIAFAAVGLLSDILNLTKNHWRGLPALVEVFSEVAVGGCF 301

Query: 301 SFWLDATSIPSPYGMYSFL 319
           SFWLD TSI SPYGM + L
Sbjct: 302 SFWLDITSISSPYGMKTLL 320

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557821|ref|XP_003547209.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase homolog [Glycine max]

 Score =  279 bits (714), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 150/249 (60%), Positives = 190/249 (76%), Gaps = 1/249 (0%)

Query: 68  AFNDD-FDIASFDNWSDDEGTVGYMVSSSEGEESDGEIVLNSISDTDLPSVFVSNNDALT 126
           AF+DD FDI   D+W+ D+ +  Y +SSS+GE+SDGEI L  ++D DLPSV  SNNDALT
Sbjct: 69  AFDDDSFDIPMLDDWNADDSSSAYKLSSSDGEDSDGEIFLTPVNDLDLPSVSASNNDALT 128

Query: 127 LTAHRLAMIGRARRRHRIKLGLFINLGLITFLTVLLLFVDWCAWKIVRLPLAPFYLTRPF 186
           + AHR A +GR R++ R KLG+FI LGLI  LT+LLL+VDWCAW+IVRLPL+PFYLTRPF
Sbjct: 129 VAAHRFANLGRGRKKSRTKLGIFITLGLIIVLTLLLLYVDWCAWRIVRLPLSPFYLTRPF 188

Query: 187 FISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIAT 246
            ISA+L S AGY+CVP+ +  KI  +I+K+GPARH  K   PT+GGL F+PIG+ V    
Sbjct: 189 LISAILASFAGYVCVPIFRHFKIIHVIKKQGPARHHMKKTAPTLGGLLFIPIGVVVAHVF 248

Query: 247 VGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWLDA 306
            G SS++VSGA+ AT+A A +GL+ D++ L KNH   L A + ++LEVAVGTWFSFWLD 
Sbjct: 249 AGSSSIEVSGAAGATIAFAAVGLLSDILSLTKNHWRALPALTEVLLEVAVGTWFSFWLDI 308

Query: 307 TSIPSPYGM 315
           TSI SPYGM
Sbjct: 309 TSISSPYGM 317

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|240255997|ref|NP_193561.4| phospho-N-acetylmuramoyl-pentapeptide-transferase-like protein [Arabidopsis thaliana] gi|229621258|sp|O49730.3|MRAY_ARATH RecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase homolog; AltName: Full=Translocase I gi|332658618|gb|AEE84018.1| phospho-N-acetylmuramoyl-pentapeptide-transferase-like protein [Arabidopsis thaliana]

 Score =  216 bits (549), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/289 (47%), Positives = 183/289 (63%), Gaps = 29/289 (10%)

Query: 35  FRSGSLSPELNGSKSNVSRTHGYQLQYTA--------VQVGAFNDDFDIASFDNWSDDEG 86
           FRS    P L+ S+  +        +++A        V V AF+DD    +FD ++ D  
Sbjct: 19  FRSLESIPPLSNSRYRIESGSPSSFKFSAPSLQRHSSVSVKAFDDD----TFDFYTGDIF 74

Query: 87  TVGYMVSSSEGEESDGEIVLNSISDTDLPSVFVSNNDALTLTAHRLAMIGRARRRHRIKL 146
              Y +SSSEGEESDG+  LN +++T               TA +L    R R++HRI+ 
Sbjct: 75  AATYAISSSEGEESDGDYALNVVTET---------------TAQKLGKFPRGRKKHRIRY 119

Query: 147 GLFINLGLITFLTVLLLFVDWCAWKIVRLPLAPFYLTRPFFISAVLVSCAGYICVPLLKS 206
           G  INLGL+ FL++LLL +D  AWKIVRLPL P++L+ PFF SA+LV+ AGYI VPLL  
Sbjct: 120 G--INLGLLAFLSLLLLLMDSFAWKIVRLPLPPYFLSMPFFTSAILVTLAGYIFVPLLDR 177

Query: 207 LKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGASAATLAIAL 266
           L++ + IR  GP  H+R+   PTMGGLFFVPIG+ V IA    SS++V GA+AAT+A A 
Sbjct: 178 LRVHEPIRTLGPVPHNRRPTIPTMGGLFFVPIGVVVAIALNKVSSIEVLGAAAATVAFAA 237

Query: 267 IGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWLDATSIPSPYGM 315
           IGLIDD + L   +++GLSA  +L+LE AVGT F+FWL+  S+ SPYGM
Sbjct: 238 IGLIDDSLSLYSENNNGLSAKIQLLLEAAVGTCFAFWLETASLSSPYGM 286

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414875748|tpg|DAA52879.1| TPA: hypothetical protein ZEAMMB73_482187 [Zea mays]

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/264 (43%), Positives = 157/264 (59%), Gaps = 8/264 (3%)

Query: 53  RTHGYQLQYTAVQVGAFNDDFDIASFDNWSDDEGTVGYMVSSSEGEESDGEIVLNSISDT 112
           R H  Q+      V AF+DD    S  +   DE   G    SSE E SD +++L + +D 
Sbjct: 55  RRHAIQV------VTAFDDDPGDFSLVHDDGDE-QFGVPQYSSESEWSDDDVILTAFTDV 107

Query: 113 DLPSVFVSNND-ALTLTAHRLAMIGRARRRHRIKLGLFINLGLITFLTVLLLFVDWCAWK 171
           +LP    S  + ALT+ AHR A I +  ++ R + GL  N+GL+ FL +LL FVDWC+WK
Sbjct: 108 ELPMAVKSRAEGALTIAAHRFATIDKGHKKSRTQQGLMNNVGLVAFLVMLLFFVDWCSWK 167

Query: 172 IVRLPLAPFYLTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMG 231
           IVRLPL  FYLTRPF  SAVL + AG++  P+  SLKI    R+      S +  TP MG
Sbjct: 168 IVRLPLDSFYLTRPFLTSAVLSALAGFLFAPVADSLKIHHFRRRGKSVSPSSRKPTPGMG 227

Query: 232 GLFFVPIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLI 291
           GLFFVP+GI V    VG +S  V+GA+  TL  A++GL+DD+  L  +H+  +  W R +
Sbjct: 228 GLFFVPVGIFVAKREVGSNSNGVNGAAMITLIFAMVGLLDDISSLAVDHNYKIPRWIRFL 287

Query: 292 LEVAVGTWFSFWLDATSIPSPYGM 315
           +++  G +FS WL +T I +PY M
Sbjct: 288 VQIVAGIYFSNWLGSTDISTPYSM 311

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
TAIR|locus:2141892	480	TRANS11 "AT4G18270" [Arabidops	0.583	0.387	0.462	1.4e-44
TIGR_CMR|BA_4052	324	BA_4052 "phospho-N-acetylmuram	0.354	0.348	0.316	2.9e-07
TIGR_CMR|CHY_2072	325	CHY_2072 "phospho-N-acetylmura	0.357	0.350	0.3	2.5e-06
TIGR_CMR|CBU_0125	361	CBU_0125 "phospho-N-acetylmura	0.385	0.340	0.279	3.1e-06
TIGR_CMR|GSU_3072	358	GSU_3072 "phospho-N-acetylmura	0.363	0.324	0.275	0.00046

TAIR|locus:2141892 TRANS11 "AT4G18270" [Arabidopsis thaliana (taxid:3702)]

 Score = 420 (152.9 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
 Identities = 87/188 (46%), Positives = 113/188 (60%)

Query:   128 TAHRLAMIGRARRRHRIKLGLFINXXXXXXXXXXXXXXDWCAWKIVRLPLAPFYLTRPFF 187
             TA +L    R R++HRI+ G  IN              D  AWKIVRLPL P++L+ PFF
Sbjct:   101 TAQKLGKFPRGRKKHRIRYG--INLGLLAFLSLLLLLMDSFAWKIVRLPLPPYFLSMPFF 158

Query:   188 ISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATV 247
              SA+LV+ AGYI VPLL  L++ + IR  GP  H+R+   PTMGGLFFVPIG+ V IA  
Sbjct:   159 TSAILVTLAGYIFVPLLDRLRVHEPIRTLGPVPHNRRPTIPTMGGLFFVPIGVVVAIALN 218

Query:   248 GFSSLQVXXXXXXXXXXXXXXXXDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWLDAT 307
               SS++V                DD + L   +++GLSA  +L+LE AVGT F+FWL+  
Sbjct:   219 KVSSIEVLGAAAATVAFAAIGLIDDSLSLYSENNNGLSAKIQLLLEAAVGTCFAFWLETA 278

Query:   308 SIPSPYGM 315
             S+ SPYGM
Sbjct:   279 SLSSPYGM 286

GO:0003824 "catalytic activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006486 "protein glycosylation" evidence=ISS

GO:0006629 "lipid metabolic process" evidence=ISS

GO:0008963 "phospho-N-acetylmuramoyl-pentapeptide-transferase activity" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

TIGR_CMR|BA_4052 BA_4052 "phospho-N-acetylmuramoyl-pentapeptide-transferase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 141 (54.7 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 37/117 (31%), Positives = 58/117 (49%)

Query:   190 AVLVSCA-GYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGL-FFVPIGIAVTIATV 247
             A L+S A   + +P L+ LK  Q IR EGP  H +K  TPTMGG+  +V + +   I  +
Sbjct:    13 AFLISVALSPLFIPFLRKLKFGQSIRDEGPKSHQKKSGTPTMGGIVIYVSMMVTSLIMAI 72

Query:   248 GFSSL--QVXXXXXXXXXXXXXXXXDDVICLVKNHSSGLSAWSRLILEVAVGTWFSF 302
              F+ L  +V                DD I +VK  + GL++  +L+ ++ +   F F
Sbjct:    73 KFNHLGAEVSLLLLVTFGYGLIGFLDDYIKVVKKRNLGLTSKQKLVGQLVIAIAFFF 129

GO:0008963 "phospho-N-acetylmuramoyl-pentapeptide-transferase activity" evidence=ISS

GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS

TIGR_CMR|CHY_2072 CHY_2072 "phospho-N-acetylmuramoyl-pentapeptide-transferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 133 (51.9 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 36/120 (30%), Positives = 55/120 (45%)

Query:   188 ISAVLVSC-----AGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAV 242
             ++A+LVS       G + +P L  LKI Q +R EGP RH +K  TPTMGG+ F+ + + V
Sbjct:     7 VTALLVSFFVALGGGRVLIPWLLKLKIGQTVRTEGPKRHLKKSGTPTMGGIIFL-LSLVV 65

Query:   243 TIATVGFSSLQVXXXXXXXXXXXXXXXXDDVICLVKNHSSGLSAWSRLILEVAVGTWFSF 302
             T+        +                 DD + +V     GL A  +L+ +V      +F
Sbjct:    66 TVVVFQAFDAKTLLLLITTLLFGLLGFLDDYLKVVLRRPLGLRAREKLLGQVIFSLVLTF 125

GO:0008963 "phospho-N-acetylmuramoyl-pentapeptide-transferase activity" evidence=ISS

GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS

TIGR_CMR|CBU_0125 CBU_0125 "phospho-N-acetylmuramoyl-pentapeptide-transferase" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 133 (51.9 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 36/129 (27%), Positives = 63/129 (48%)

Query:   181 YLTRPFFISA----VLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFV 236
             YLT    +SA    +LV       +  L SL++ Q++R +GP  H +K  TPTMGG+  +
Sbjct:    21 YLTFRSIVSALTALILVLSLSPRLIKYLVSLQVGQMVRNDGPQTHLKKSGTPTMGGVLII 80

Query:   237 PIGIAVTIATVG-FSSLQVXXXXXXXXXXXXXXXXDDVICLVKNHSSGLSAWSRLILEVA 295
              + I +++   G  S+  +                DD   +++ +S GLSA S+ +L+  
Sbjct:    81 -VAIVISVLLWGDLSNRFIWVILLVTVAFSAIGWMDDYRKIIRKNSKGLSARSKYLLQSI 139

Query:   296 VGTWFSFWL 304
             +G   + +L
Sbjct:   140 IGALAAVYL 148

GO:0008963 "phospho-N-acetylmuramoyl-pentapeptide-transferase activity" evidence=ISS

GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS

TIGR_CMR|GSU_3072 GSU_3072 "phospho-N-acetylmuramoyl-pentapeptide-transferase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 114 (45.2 bits), Expect = 0.00046, P = 0.00046
 Identities = 33/120 (27%), Positives = 58/120 (48%)

Query:   181 YLT-RPFF--ISAVLVS-CAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFV 236
             YLT R  +  I+A++VS   G   +  L++L+ RQ+IR +GP  H +K  TPTMGG+  +
Sbjct:    21 YLTFRTIYAVITALVVSFILGPWVIRKLEALQARQVIRTDGPESHLKKSGTPTMGGILIL 80

Query:   237 PIGIAVTIATVGFSSLQVXXXXXXXXXXXXXXXXDDVICLVKNHSSGLSAWSRLILEVAV 296
                +  T+     ++  V                DD   +V+  + GLS   ++  ++ +
Sbjct:    81 ASIVIPTLLWADLTNRYVWTTLFVILGYGLIGFTDDYKKVVEKDTKGLSPRQKMFWQMLI 140


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.137   0.426    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      319       278   0.00081  115 3  11 22  0.42    33
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  212 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.66u 0.17s 18.83t   Elapsed:  00:00:01
  Total cpu time:  18.66u 0.17s 18.83t   Elapsed:  00:00:01
  Start:  Fri May 10 17:07:58 2013   End:  Fri May 10 17:07:59 2013

GO:0008963 "phospho-N-acetylmuramoyl-pentapeptide-transferase activity" evidence=ISS

GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.8.13	LOW CONFIDENCE prediction!
3rd Layer	2.7.8	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00003447001	SubName- Full=Chromosome undetermined scaffold_143, whole genome shotgun sequence; (374 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00000431001	SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (510 aa)	•		•	•		•	•		0.991
	GSVIVG00003087001	SubName- Full=Chromosome undetermined scaffold_139, whole genome shotgun sequence; (510 aa)	•		•	•		•	•		0.988
	GSVIVG00017740001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (320 aa)	•		•	•		•	•		0.987
	GSVIVG00037717001	SubName- Full=Chromosome undetermined scaffold_91, whole genome shotgun sequence; (527 aa)	•		•	•			•		0.977
	GSVIVG00025526001	SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (402 aa)	•		•				•		0.975
	GSVIVG00038228001	SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (344 aa)	•		•				•		0.967
	GSVIVG00027244001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (424 aa)	•		•				•		0.933
	GSVIVG00021622001	SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (423 aa)	•		•				•		0.921
	GSVIVG00032399001	SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (228 aa)	•						•		0.883
	GSVIVG00027807001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (471 aa)	•		•				•		0.874

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	319
PRK00108	344	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapept	1e-24
cd06852	280	cd06852, GT_MraY, Phospho-N-acetylmuramoyl-pentape	5e-20
TIGR00445	321	TIGR00445, mraY, phospho-N-acetylmuramoyl-pentapep	4e-16
PRK14654	302	PRK14654, mraY, phospho-N-acetylmuramoyl-pentapept	3e-10
COG0472	319	COG0472, Rfe, UDP-N-acetylmuramyl pentapeptide pho	1e-07
cd06854	253	cd06854, GT_WbpL_WbcO_like, The members of this su	2e-05
cd06499	185	cd06499, GT_MraY-like, Glycosyltransferase 4 (GT4)	3e-05
cd06853	249	cd06853, GT_WecA_like, This subfamily contains Esc	2e-04

>gnl|CDD|234638 PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional

 Score =  101 bits (254), Expect = 1e-24
 Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 181 YLTR----PFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFV 236
           YLT         + ++    G   +  L+ LK  Q IR++GP  H +K  TPTMGG+  +
Sbjct: 6   YLTFRALLALLTALLISLILGPRFIRFLRKLKFGQPIREDGPQSHLKKAGTPTMGGILIL 65

Query: 237 PIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAV 296
              +  T+     S+  V      TL   LIG +DD + +VK ++ GLSA  +L+L++ +
Sbjct: 66  LAIVISTLLWADLSNPYVWLVLLVTLGFGLIGFLDDYLKVVKKNNLGLSARQKLLLQILI 125

Query: 297 GTWFSFWL 304
              F+  L
Sbjct: 126 ALIFALLL 133

Length = 344

>gnl|CDD|133462 cd06852, GT_MraY, Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the formation of the first lipid intermediate in the synthesis of bacterial cell wall peptidoglycan

 Score = 87.5 bits (218), Expect = 5e-20
 Identities = 32/102 (31%), Positives = 48/102 (47%)

Query: 217 GPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGASAATLAIALIGLIDDVICL 276
           GP  H +K  TPTMGG+ F+   +  T+      S +V      TL   LIG +DD + +
Sbjct: 1   GPKSHLKKAGTPTMGGILFILAILISTLLWADLDSPEVLLLLLLTLGFGLIGFLDDYLKV 60

Query: 277 VKNHSSGLSAWSRLILEVAVGTWFSFWLDATSIPSPYGMYSF 318
           VK  + GLSA  +L+L+  +   F+  L   +         F
Sbjct: 61  VKKRNLGLSARQKLLLQFLIAIVFALLLYYFNGSGTLITLPF 102

It catalyzes the formation of undecaprenyl-pyrophosphoryl-N-acetylmuramoyl- pentapeptide from UDP-MurNAc-pentapeptide and undecaprenyl-phosphate. It is an integral membrane protein with possibly ten transmembrane domains. Length = 280

>gnl|CDD|161884 TIGR00445, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase

 Score = 77.1 bits (190), Expect = 4e-16
 Identities = 35/108 (32%), Positives = 52/108 (48%)

Query: 197 GYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSG 256
           G   +P+LK LK  Q+IR +GP  H +K  TPTMGG+  V   I  T+      +  V  
Sbjct: 5   GPKVIPMLKKLKAGQVIRSDGPKSHLKKKGTPTMGGIMIVFAIIVSTVLWAQLGNPYVLL 64

Query: 257 ASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWL 304
                L    IG +DD   + +  + GL+A  +L  ++ +   F  WL
Sbjct: 65  VLFVLLGYGFIGFVDDYRKIKRKSNKGLTAKQKLFGQIIIALIFCTWL 112

Involved in peptidoglycan biosynthesis, the enzyme catalyzes the first of the lipid cycle reactions. Also known as Muramoyl-Pentapeptide Transferase (murX) [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. Length = 321

>gnl|CDD|173117 PRK14654, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional

 Score = 59.9 bits (145), Expect = 3e-10
 Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 5/97 (5%)

Query: 199 ICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGAS 258
           I + L +  +I Q IRKEGP  H  K  TPTMGG+ FV  G        G  S   +   
Sbjct: 15  ILIKLFRRRRIGQYIRKEGPDLHGYKEGTPTMGGILFVLTGF-----LFGMISKTNTMVL 69

Query: 259 AATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVA 295
                  LIG +DD + + +  S+GL  + + +L+  
Sbjct: 70  LGMFLFFLIGFLDDFLSVARKDSTGLKTYQKALLQTL 106

Length = 302

>gnl|CDD|223548 COG0472, Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase [Cell envelope biogenesis, outer membrane]

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 11/139 (7%)

Query: 186 FFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIA 245
             IS V+      I +  L+ L +  I  ++GP  H  K  TPTMGGL  +   +++ +A
Sbjct: 9   LIISFVISLILTPILIKFLRKLGLGDI-PEDGPKSH--KKGTPTMGGLAIL---LSILLA 62

Query: 246 TVGFSSLQ----VSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTW-F 300
           ++  ++L     V       L   LIG +DD + L       +     L+L +A+G    
Sbjct: 63  SLLAANLLTNPYVWLVLLGLLGFGLIGFLDDRLKLSPKIRGLIQKLKALLLIIALGELPI 122

Query: 301 SFWLDATSIPSPYGMYSFL 319
            F      IP        L
Sbjct: 123 KFLDIPLGIPFFKLPGPLL 141

Length = 319

>gnl|CDD|133464 cd06854, GT_WbpL_WbcO_like, The members of this subfamily catalyze the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate (Und-P) molecule and N-acetylhexosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylhexosamine precursor

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 11/104 (10%)

Query: 219 ARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGA---SAATLAIALIGLIDDVIC 275
            R S    TP  GG+ FV   +   +       L            L +A +G IDD+  
Sbjct: 7   ERSSHTKPTPRGGGIAFVLAFLLALLLAAAAGPLNDLSYLLLLIGLLLLAAVGFIDDLR- 65

Query: 276 LVKNHSSGLSAWSRLILEVAVGTWFSFWLDATSIPSPYGMYSFL 319
                   LS   RL++++       + L   +      +  +L
Sbjct: 66  -------SLSPKIRLLVQLLAAALALYALGPLTSLLLNFLPPWL 102

The WbcO/WbpL substrate specificity has not yet been determined, but the structure of their biosynthetic end products implies that UDP-N-acetyl-D-fucosamine (UDP-FucNAc) and/or UDPN-acetyl-D-quinosamine (UDP-QuiNAc) are used. The subgroup of bacterial UDP-HexNAc:polyprenol-P HexNAc-1-P transferases includes the WbcO protein from Yersinia enterocolitica and the WbpL protein from Pseudomonas aeruginosa. These transferases initiate LPS O-antigen biosynthesis. Similar to other GlcNAc/MurNAc-1-P transferase family members, WbpL is a highly hydrophobic protein possessing 11 predicted transmembrane segments. Length = 253

>gnl|CDD|133460 cd06499, GT_MraY-like, Glycosyltransferase 4 (GT4) includes both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine:polyprenol phosphate D-N-acetylhexosamine-1-phosphate transferases

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 10/74 (13%)

Query: 227 TPTMGGLFFVPIGIAVTIATV---GFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSG 283
           TPTMGGL    I +   +  +     S+  +  A  + L   ++G IDD++ L       
Sbjct: 2   TPTMGGL---AILLGFLLGVLLYIPHSNTLILLALLSGLVAGIVGFIDDLLGL----KVE 54

Query: 284 LSAWSRLILEVAVG 297
           LS   +L+L++   
Sbjct: 55  LSEREKLLLQILAA 68

They catalyze the transfer of a D-N-acetylhexosamine 1-phosphate to a membrane-bound polyprenol phosphate, which is the initiation step of protein N-glycosylation in eukaryotes and peptidoglycan biosynthesis in bacteria. One member, D-N-acetylhexosamine 1-phosphate transferase (GPT) is a eukaryotic enzyme, which is specific for UDP-GlcNAc as donor substrate and dolichol-phosphate as the membrane bound acceptor. The bacterial members MraY, WecA, and WbpL/WbcO utilize undecaprenol phosphate as the acceptor substrate, but use different UDP-sugar donor substrates. MraY-type transferases are highly specific for UDP-N-acetylmuramate-pentapeptide, whereas WecA proteins are selective for UDP-N-acetylglucosamine (UDP-GlcNAc). The WbcO/WbpL substrate specificity has not yet been determined, but the structure of their biosynthetic endproducts implies that UDP-N-acetyl-D-fucosamine (UDP-FucNAc) and/or UDPN-acetyl-D-quinosamine (UDP-QuiNAc) are used. The eukaryotic reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for N-glycosylation. The prokaryotic reactions lead to the formation of polyprenol-linked oligosaccharides involved in bacterial cell wall and peptidoglycan assembly. Archaeal and eukaryotic enzymes may use the same substrates and are evolutionarily closer than the bacterial enzyme. Archaea possess the same N-glycosylation pathway as eukaryotes. A glycosyl transferase gene Mv1751 in M. voltae encodes for the enzyme that carries out the first step in the pathway, the attachment of GlcNAc to a dolichol lipid carrier in the membrane. A lethal mutation in the alg7 (GPT) gene in Saccharomyces cerevisiae was successfully complemented with Mv1751, the archaea gene. Length = 185

>gnl|CDD|133463 cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 11/87 (12%)

Query: 220 RHSRKGRTPTMGGL-FFVPIGIAVTIA--TVGFSSLQVSGASAATLAIALIGLIDDVICL 276
           R   KG  P +GGL  F+   +A+ +A     F   ++ G  A    I L+GL+DD+   
Sbjct: 1   RKVHKGPIPRLGGLAIFLGFLLALLLALLFPFFLLPELLGLLAGATIIVLLGLLDDLF-- 58

Query: 277 VKNHSSGLSAWSRLILEVAVGTWFSFW 303
                  LS   +L+ ++       F 
Sbjct: 59  ------DLSPKVKLLGQILAALIVVFG 79

WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine. Length = 249

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	319
PRK14655	304	mraY phospho-N-acetylmuramoyl-pentapeptide-transfe	99.86
PRK14654	302	mraY phospho-N-acetylmuramoyl-pentapeptide-transfe	99.85
PRK00108	344	mraY phospho-N-acetylmuramoyl-pentapeptide-transfe	99.83
TIGR00445	321	mraY phospho-N-acetylmuramoyl-pentapeptide-transfe	99.8
COG0472	319	Rfe UDP-N-acetylmuramyl pentapeptide phosphotransf	99.68
PRK15119	365	undecaprenyl-phosphate alpha-N-acetylglucosaminyl	99.58
TIGR02380	346	ECA_wecA undecaprenyl-phosphate alpha-N-acetylgluc	99.58
cd06852	280	GT_MraY Phospho-N-acetylmuramoyl-pentapeptide-tran	99.42
cd06855	283	GT_GPT_euk UDP-GlcNAc:dolichol-P GlcNAc-1-P transf	99.28
cd06912	193	GT_MraY_like This subfamily is composed of unchara	99.26
cd06854	253	GT_WbpL_WbcO_like The members of this subfamily ca	99.24
cd06499	185	GT_MraY-like Glycosyltransferase 4 (GT4) includes	99.24
cd06851	223	GT_GPT_like This family includes eukaryotic UDP-Gl	99.17
cd06853	249	GT_WecA_like This subfamily contains Escherichia c	99.11
cd06856	280	GT_GPT_archaea UDP-GlcNAc:dolichol-P GlcNAc-1-P tr	99.08
PF00953	159	Glycos_transf_4: Glycosyl transferase family 4; In	97.52
PF10555	13	MraY_sig1: Phospho-N-acetylmuramoyl-pentapeptide-t	97.47

>PRK14655 mraY phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional

Probab=99.86  E-value=1.9e-21  Score=186.38  Aligned_cols=116  Identities=25%  Similarity=0.297  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCcccccccCCCcCCCCCCCCccCchhHHHHHHHHHHHH----HhcCchhHHHHHHHHH
Q 020939          187 FISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIAT----VGFSSLQVSGASAATL  262 (319)
Q Consensus       187 liAfllS~lltpi~Ipllrklklgq~IRedgP~~H~~K~gTPTMGGLaIvpig~ivall~----~~~~s~~i~~lli~tL  262 (319)
                      +.+++++++++|.++++++|.|++|.+|+|+|++|.||++||||||++|+ ++++++.+.    ........+.++.+++
T Consensus         2 ~~s~~ls~~~~p~~i~~l~~~~~~q~ir~dgP~~~~~k~~tPtmGGi~ii-~~~li~~~~~~~~~~~~~~~~~~~l~~~~   80 (304)
T PRK14655          2 VVAALLSWFLVGLFIRYSKARGWGQPVRQDGPQTHLAKEGTPTAGGVAFV-LALALVFFPLYAFGHAGGERELLIMLAAL   80 (304)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCCcccccCcccccCCCCCCCcChHHHH-HHHHHHHHHHHHhhhccchHHHHHHHHHH
Confidence            35788899999999999999999999999999999999999999999999 677766532    1112233445667788


Q ss_pred             HHHHHHHhhhhhhhhhcC----CCCCChHHHHHHHHHHHHHHHHH
Q 020939          263 AIALIGLIDDVICLVKNH----SSGLSAWSRLILEVAVGTWFSFW  303 (319)
Q Consensus       263 lf~lIGlIDDi~Kl~kk~----n~GLspr~KLllQIlAAll~~~~  303 (319)
                      +++++|++||+.|+++++    |+||+|++|+++|+++|.++..+
T Consensus        81 ~~~~iG~~DD~~kl~~~~~~~~~~gL~~~~Kl~~Q~l~a~~~~~~  125 (304)
T PRK14655         81 AMGVVGGIDDFLKIRSRMRGHGKKELLAREKFPLQFLVALVFAGF  125 (304)
T ss_pred             HHHHHHHHhhhhhhhccccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence            899999999999999887    89999999999999999876543

>PRK14654 mraY phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional

Probab=99.85  E-value=6.2e-21  Score=182.48  Aligned_cols=112  Identities=27%  Similarity=0.361  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCcccccccCCCcCCCCCCCCccCchhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q 020939          187 FISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGASAATLAIAL  266 (319)
Q Consensus       187 liAfllS~lltpi~Ipllrklklgq~IRedgP~~H~~K~gTPTMGGLaIvpig~ivall~~~~~s~~i~~lli~tLlf~l  266 (319)
                      .+++++|++++|.++++++|.|++|.+|+++|+.|++|++||||||++|++ +.++.....    .....++++++++++
T Consensus         3 ~~sf~~s~~~~p~~i~~~~k~~~~~~ir~~g~~~H~~k~~tP~mGGi~i~~-~~~~~~~~~----~~~~~~l~~~~~~~~   77 (302)
T PRK14654          3 AANFLLNLFLYPILIKLFRRRRIGQYIRKEGPDLHGYKEGTPTMGGILFVL-TGFLFGMIS----KTNTMVLLGMFLFFL   77 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCCCcccccccccccCCCCCcCCcHHHHH-HHHHHHHHH----HHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999999999999994 333332221    112334557788999


Q ss_pred             HHHhhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHHH
Q 020939          267 IGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFW  303 (319)
Q Consensus       267 IGlIDDi~Kl~kk~n~GLspr~KLllQIlAAll~~~~  303 (319)
                      +|++||+.|+++|+|+||+++.|+++|+++|+++.++
T Consensus        78 iG~lDD~~~l~~~~~~gL~~~~Kl~~q~~~a~~~~~~  114 (302)
T PRK14654         78 IGFLDDFLSVARKDSTGLKTYQKALLQTLAAFIMLLL  114 (302)
T ss_pred             HHHHhccHhhhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999886444

>PRK00108 mraY phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional

Probab=99.83  E-value=5.9e-20  Score=178.17  Aligned_cols=132  Identities=30%  Similarity=0.493  Sum_probs=108.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCcCCCCCCCCccCchhHHHHHHHHHHHHH-hcCchhHHHHHHH
Q 020939          182 LTRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATV-GFSSLQVSGASAA  260 (319)
Q Consensus       182 L~l~~liAfllS~lltpi~Ipllrklklgq~IRedgP~~H~~K~gTPTMGGLaIvpig~ivall~~-~~~s~~i~~lli~  260 (319)
                      +.+.+++++++|++++|.++++++|.+++++++.++|+.|+||++||+|||++|+ ++++++.++. ...+.+.+.++++
T Consensus        11 ~~~~~~~af~is~~~~p~~i~~~~~~~~~~~~~~~~p~~h~h~~~tP~~GGi~i~-~~~~~~~~~~~~~~~~~~~~~l~~   89 (344)
T PRK00108         11 ALLALLTALLISLILGPRFIRFLRKLKFGQPIREDGPQSHLKKAGTPTMGGILIL-LAIVISTLLWADLSNPYVWLVLLV   89 (344)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccccCCCCCCCcccHHHH-HHHHHHHHHHHhccchHHHHHHHH
Confidence            4567788999999999999999999999888888999999889999999999999 6887776432 2223445555666


Q ss_pred             HHHHHHHHHhhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHHHH-----hhcceecCCC
Q 020939          261 TLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWL-----DATSIPSPYG  314 (319)
Q Consensus       261 tLlf~lIGlIDDi~Kl~kk~n~GLspr~KLllQIlAAll~~~~l-----~~~~IslPfg  314 (319)
                      +++++++|++||+.|.++++++|++++.|+++|+++|+++..+.     ..+.+.+|+.
T Consensus        90 ~~~~~~vG~~DD~~~~~~~~~~~l~~~~kl~~q~~aa~~~~~~~~~~g~~~~~~~~p~~  148 (344)
T PRK00108         90 TLGFGLIGFLDDYLKVVKKNNLGLSARQKLLLQILIALIFALLLYLLGSTSTSLTIPFF  148 (344)
T ss_pred             HHHHHHHHhHHhhHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCCceEEecCc
Confidence            77788999999999999999999999999999999998876653     2456677764

>TIGR00445 mraY phospho-N-acetylmuramoyl-pentapeptide-transferase

Probab=99.80  E-value=2.8e-19  Score=172.01  Aligned_cols=119  Identities=32%  Similarity=0.502  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHHcCCcccccccCCCcCCCCCCCCccCchhHHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHHHHHhhh
Q 020939          194 SCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIAT-VGFSSLQVSGASAATLAIALIGLIDD  272 (319)
Q Consensus       194 ~lltpi~Ipllrklklgq~IRedgP~~H~~K~gTPTMGGLaIvpig~ivall~-~~~~s~~i~~lli~tLlf~lIGlIDD  272 (319)
                      .+++|.++++++|.|++|.+|+|+|++|+||++||+|||++|+ ++++++.++ ....+++.+.+++++++++++|++||
T Consensus         2 ~~~~p~~i~~~~r~~~~~~~~~~~~~~h~~~~~tP~~GGiai~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iG~~DD   80 (321)
T TIGR00445         2 LLLGPKVIPMLKKLKAGQVIRSDGPKSHLKKKGTPTMGGIMIV-FAIIVSTVLWAQLGNPYVLLVLFVLLGYGFIGFVDD   80 (321)
T ss_pred             EEeHHHHHHHHHHhCCCCCcccccchhccCCCCCCCcChHHHH-HHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHh
Confidence            3568999999999999999999999999999999999999999 677777643 22223444555666777889999999


Q ss_pred             hhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHh----hcceecCC
Q 020939          273 VICLVKNHSSGLSAWSRLILEVAVGTWFSFWLD----ATSIPSPY  313 (319)
Q Consensus       273 i~Kl~kk~n~GLspr~KLllQIlAAll~~~~l~----~~~IslPf  313 (319)
                      +.|.++++|+|++++.|+++|+++|++++.++.    .+.+.+|+
T Consensus        81 ~~~~~~~~~~gl~~~~rl~~q~~~a~~~~~~~~~~~~~~~~~~p~  125 (321)
T TIGR00445        81 YRKIKRKSNKGLTAKQKLFGQIIIALIFCTWLYYYGPDTFIYIPF  125 (321)
T ss_pred             HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEeccc
Confidence            999999999999999999999999988754422    22455665

Involved in peptidoglycan biosynthesis, the enzyme catalyzes the first of the lipid cycle reactions. Also known as Muramoyl-Pentapeptide Transferase (murX).

>COG0472 Rfe UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase [Cell envelope biogenesis, outer membrane]

Probab=99.68  E-value=2.6e-16  Score=151.66  Aligned_cols=104  Identities=29%  Similarity=0.392  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCcCCCCCCCCccCchhHHHHHHHHHHHHHhc--CchhHHHHHHHH
Q 020939          184 RPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGF--SSLQVSGASAAT  261 (319)
Q Consensus       184 l~~liAfllS~lltpi~Ipllrklklgq~IRedgP~~H~~K~gTPTMGGLaIvpig~ivall~~~~--~s~~i~~lli~t  261 (319)
                      ..+++++++|++++|.++++++|.+.+| +|+|+|+.|  |++||||||++|+ .+++++.++...  .+..++.+++++
T Consensus         7 ~~~i~a~~~s~~~~p~~~~~~~~~~~~~-~~~~~~k~H--~~~tP~mGGl~I~-~~~~~~~~l~~~~~~~~~~~~~l~~~   82 (319)
T COG0472           7 AALIISFVISLILTPILIKFLRKLGLGD-IPEDGPKSH--KKGTPTMGGLAIL-LSILLASLLAANLLTNPYVWLVLLGL   82 (319)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccccc-CCCcccccc--CCCCCCcchHHHH-HHHHHHHHHHHHhccchHHHHHHHHH
Confidence            3678899999999999999999999998 788999988  4599999999999 788888754322  344567788889


Q ss_pred             HHHHHHHHhhhhhhhhhcCCCCCChHHHHHH
Q 020939          262 LAIALIGLIDDVICLVKNHSSGLSAWSRLIL  292 (319)
Q Consensus       262 Llf~lIGlIDDi~Kl~kk~n~GLspr~KLll  292 (319)
                      +.++++|++||+.|++++ ++++.++.|.+.
T Consensus        83 ~~~~~iG~lDD~~~l~~~-~r~l~~~~~a~~  112 (319)
T COG0472          83 LGFGLIGFLDDRLKLSPK-IRGLIQKLKALL  112 (319)
T ss_pred             HHHHHHHHHHhHHHhhHH-hhhHHHHHHHHH
Confidence            999999999999965555 445555555444

>PRK15119 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; Provisional

Probab=99.58  E-value=2e-14  Score=140.94  Aligned_cols=119  Identities=17%  Similarity=0.232  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCcCCCCCCCCccCchhHHHHHHHHHHHHHhcCchhHHHHHHHHH
Q 020939          183 TRPFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGASAATL  262 (319)
Q Consensus       183 ~l~~liAfllS~lltpi~Ipllrklklgq~IRedgP~~H~~K~gTPTMGGLaIvpig~ivall~~~~~s~~i~~lli~tL  262 (319)
                      ...+++++++|++++|.++++++|.++.|.+++  ++  .|+++||++||++++ ++++++.++.....+....++++..
T Consensus         7 ~~~~~~~~~~s~~l~~~~~~~a~r~gl~D~P~~--Rk--~H~~~~P~~GGiai~-~~~~~~~~~~~~~~~~~~~~l~~~~   81 (365)
T PRK15119          7 STELISIFLFSTLFLFFARKVAKKIGLVDKPNY--RK--RHQGLIPLVGGISVY-AGICFTFGITDYYIPHASLYLACAG   81 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--Cc--CCCCCCCCcCcHHHH-HHHHHHHHHHHhcchhHHHHHHHHH
Confidence            345667889999999999999999998766432  33  458899999999999 6887776543222223333444555


Q ss_pred             HHHHHHHhhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHHHH--hhcceecCCC
Q 020939          263 AIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWL--DATSIPSPYG  314 (319)
Q Consensus       263 lf~lIGlIDDi~Kl~kk~n~GLspr~KLllQIlAAll~~~~l--~~~~IslPfg  314 (319)
                      +++++|++||++        +++|+.|+++|+++|.++..+.  ..+.+..|++
T Consensus        82 ll~~iG~~DD~~--------~l~~~~RL~~Q~~aa~~l~~~~g~~i~~~~~~~~  127 (365)
T PRK15119         82 VLVFVGALDDRF--------DISVKIRATIQAAVGIVMMVFAGLYLSSLGYIFG  127 (365)
T ss_pred             HHHHHHhHhccc--------CCCHHHHHHHHHHHHHHHHHHhCcchhccccccc
Confidence            577899999998        8999999999999997776543  2344444543

>TIGR02380 ECA_wecA undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase

Probab=99.58  E-value=2.4e-14  Score=139.51  Aligned_cols=106  Identities=15%  Similarity=0.163  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCcCCCCCCCCccCchhHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 020939          185 PFFISAVLVSCAGYICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFSSLQVSGASAATLAI  264 (319)
Q Consensus       185 ~~liAfllS~lltpi~Ipllrklklgq~IRedgP~~H~~K~gTPTMGGLaIvpig~ivall~~~~~s~~i~~lli~tLlf  264 (319)
                      .++++++++++++|.++++++|.++.|.+++  ++  .||++||++||++++ .+++++.+......+....++.+..++
T Consensus         3 ~~~~~~~~s~~~~~~~~~~a~r~~lvD~P~~--Rk--~H~~~~P~~GGiai~-~~~~~~~~~~~~~~~~~~~~l~~~~li   77 (346)
T TIGR02380         3 ELIVIFLSSFAFLFLMRKVAKIVGLVDKPNA--RK--RHQGFIPLVGGISIF-LTLCIYLFLHPALIPHYSLYLFCATIL   77 (346)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCcCCCC--CC--CCCCCcCCcCcHHHH-HHHHHHHHHHhcchhHHHHHHHHHHHH
Confidence            4567888999999999999999998766543  33  458899999999999 687777643222223333445565667


Q ss_pred             HHHHHhhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHHH
Q 020939          265 ALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFW  303 (319)
Q Consensus       265 ~lIGlIDDi~Kl~kk~n~GLspr~KLllQIlAAll~~~~  303 (319)
                      +++|++||+.        +++++.|+++|+++|.+++.+
T Consensus        78 ~~iG~~DD~~--------~Ls~~~rl~~q~~aa~~~~~~  108 (346)
T TIGR02380        78 VVIGIIDDRF--------DISVKIRLAIQAAVSIVMIQF  108 (346)
T ss_pred             HHHHHHhhcc--------CCCHHHHHHHHHHHHHHHHHH
Confidence            8999999998        899999999999999877655

Members of this family are the WecA enzyme of enterobacterial common antigen biosynthesis, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase. This family represents one narrow clade, and closely related sequences outside this clade may represent enzymes that catalyze the same specific reaction, but in the context of different pathways. A His-rich motif in a cytosolic loop of this integral membrane protein, shown critical to enzymatic activity for WecA (see ref ) is variously present or absent in the clade that includes Bacillus subtilis TagO teichoic acid biosynthesis enzyme, which may catalyze the same reaction as WecA.

>cd06852 GT_MraY Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the formation of the first lipid intermediate in the synthesis of bacterial cell wall peptidoglycan

Probab=99.42  E-value=8e-13  Score=125.06  Aligned_cols=86  Identities=35%  Similarity=0.575  Sum_probs=68.6

Q ss_pred             CCcCCCCCCCCccCchhHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCCChHHHHHHHHHH
Q 020939          218 PARHSRKGRTPTMGGLFFVPIGIAVTIATV-GFSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAV  296 (319)
Q Consensus       218 P~~H~~K~gTPTMGGLaIvpig~ivall~~-~~~s~~i~~lli~tLlf~lIGlIDDi~Kl~kk~n~GLspr~KLllQIlA  296 (319)
                      +.+|.||++||++||++++ .+++++.+.. ...+...+.++.+.++++++|++||+.++++++++|++++.|+++|+++
T Consensus         2 ~~~~~h~~~~P~~GGiai~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vG~~DD~~~l~~~~~~~l~~~~rL~~q~~~   80 (280)
T cd06852           2 PKSHLKKAGTPTMGGILFI-LAILISTLLWADLDSPEVLLLLLLTLGFGLIGFLDDYLKVVKKRNLGLSARQKLLLQFLI   80 (280)
T ss_pred             CcccCCCCCCCCccHHHHH-HHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhHHHhhHHHhccCCCCCCHHHHHHHHHHH
Confidence            4567889999999999999 6777776432 2213334445566677889999999999999999999999999999999


Q ss_pred             HHHHHHHH
Q 020939          297 GTWFSFWL  304 (319)
Q Consensus       297 All~~~~l  304 (319)
                      |.++..+.
T Consensus        81 a~~~~~~~   88 (280)
T cd06852          81 AIVFALLL   88 (280)
T ss_pred             HHHHHHHH
Confidence            98776653

It catalyzes the formation of undecaprenyl-pyrophosphoryl-N-acetylmuramoyl-pentapeptide from UDP-MurNAc-pentapeptide and undecaprenyl-phosphate. It is an integral membrane protein with possibly ten transmembrane domains.

>cd06855 GT_GPT_euk UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol

Probab=99.28  E-value=2e-11  Score=116.20  Aligned_cols=91  Identities=18%  Similarity=0.145  Sum_probs=70.6

Q ss_pred             HHHHHHHHHcCCcccccccCCCcCCCCCCCCccCchhHHHHHHHHHHHHHhcC----------chhHHHHHHHHHHHHHH
Q 020939          198 YICVPLLKSLKIRQIIRKEGPARHSRKGRTPTMGGLFFVPIGIAVTIATVGFS----------SLQVSGASAATLAIALI  267 (319)
Q Consensus       198 pi~Ipllrklklgq~IRedgP~~H~~K~gTPTMGGLaIvpig~ivall~~~~~----------s~~i~~lli~tLlf~lI  267 (319)
                      |.+++++++.++...   |.+|.|  |.+||++||++++ ++++++..+....          ..+.+.+++++++++++
T Consensus         2 p~~i~~~~~~~l~~~---d~~k~~--~~~vP~~GGlai~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i   75 (283)
T cd06855           2 PKFGPLFIKAGLYGI---DLNKNG--EEKIPESAGLVPG-IVFLIVLFLFIPFPFLKDFPHDKLVEYLSALLSICCMTFL   75 (283)
T ss_pred             hhHHHHHHHCCCccc---CCCCCC--CCCCCCcCcHHHH-HHHHHHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHH
Confidence            788999999998644   555555  6899999999999 7888776432111          12344567777889999


Q ss_pred             HHhhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHH
Q 020939          268 GLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSF  302 (319)
Q Consensus       268 GlIDDi~Kl~kk~n~GLspr~KLllQIlAAll~~~  302 (319)
                      |++||+.        +++++.|+++|+++|+++++
T Consensus        76 G~lDD~~--------~l~~~~Kl~~q~~aa~~~~~  102 (283)
T cd06855          76 GFADDVL--------DLRWRHKLILPTFASLPLLM  102 (283)
T ss_pred             HHhhchh--------ccCchHHHHHHHHHHHHHHH
Confidence            9999999        79999999999999986553

The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. A series of six conserved motifs designated A through F, ranging in length from 5 to 13 amino acid residues, has been identified in this family. They have been determined to be important for stable expression, substrate binding, or catalytic activities.

>cd06912 GT_MraY_like This subfamily is composed of uncharacterized bacterial glycosyltransferases in the MraY-like family

Probab=99.26  E-value=3.1e-11  Score=108.82  Aligned_cols=84  Identities=20%  Similarity=0.262  Sum_probs=61.0

Q ss_pred             CCCCCCCCccCchhHHHHHHHHHHHHHh-cCchhHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCCC-hHHHHHHHHHHHH
Q 020939          221 HSRKGRTPTMGGLFFVPIGIAVTIATVG-FSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLS-AWSRLILEVAVGT  298 (319)
Q Consensus       221 H~~K~gTPTMGGLaIvpig~ivall~~~-~~s~~i~~lli~tLlf~lIGlIDDi~Kl~kk~n~GLs-pr~KLllQIlAAl  298 (319)
                      +.||++||++||++++ ++++++.+... ....+...+++++++++++|++||+.        +++ ++.|+++|+++|+
T Consensus         5 k~H~~~~P~~GGi~i~-~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~iG~~DD~~--------~l~~~~~kl~~q~~~a~   75 (193)
T cd06912           5 KFHTRPTPRIGGVAIF-LGLLAGLLLLSLLSGSLLLLLLLAALPAFLAGLLEDIT--------KRVSPRIRLLATFLSAL   75 (193)
T ss_pred             CCCCCCCCCccHHHHH-HHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhhh--------hcccHHHHHHHHHHHHH
Confidence            3569999999999999 67776653321 11233444566677889999999999        678 9999999999998


Q ss_pred             HHHHHHh--hcceecCC
Q 020939          299 WFSFWLD--ATSIPSPY  313 (319)
Q Consensus       299 l~~~~l~--~~~IslPf  313 (319)
                      ++.++..  ...+..|+
T Consensus        76 ~~~~~~~~~~~~~~~~~   92 (193)
T cd06912          76 LAVWLLGASITRLDLPG   92 (193)
T ss_pred             HHHHHhcCccceeeccc
Confidence            7766543  33445554

This family contains both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine:polyprenol phosphate D-N-acetylhexosamine-1-phosphate transferases, which catalyze the transfer of a D-N-acetylhexosamine 1-phosphate to a membrane-bound polyprenol phosphate. This is the initiation step of protein N-glycosylation in eukaryotes and peptidoglycan biosynthesis in bacteria. The three bacterial members MraY, WecA, and WbpL/WbcO, utilize undecaprenol phosphate as the acceptor substrate, but use different UDP-sugar donor substrates. MraY-type transferases are highly specific for UDP-N-acetylmuramate-pentapeptide, whereas WecA proteins are selective for UDP-N-acetylglucosamine (UDP-GlcNAc). The WbcO/WbpL substrate specificity has not yet been determined, but the structure of their biosynthetic end products implies that UDP-N-acetyl-D-fucosamine (UDP-FucNAc) and/or UDPN-acetyl-D-

>cd06854 GT_WbpL_WbcO_like The members of this subfamily catalyze the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate (Und-P) molecule and N-acetylhexosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylhexosamine precursor

Probab=99.24  E-value=3.4e-11  Score=112.21  Aligned_cols=73  Identities=25%  Similarity=0.358  Sum_probs=55.8

Q ss_pred             CCCCCCCCccCchhHHHHHHHHHHHHH-hc---CchhHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCCChHHHHHHHHHH
Q 020939          221 HSRKGRTPTMGGLFFVPIGIAVTIATV-GF---SSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAV  296 (319)
Q Consensus       221 H~~K~gTPTMGGLaIvpig~ivall~~-~~---~s~~i~~lli~tLlf~lIGlIDDi~Kl~kk~n~GLspr~KLllQIlA  296 (319)
                      +.||++||+|||++|+ .+++++.++. ..   ...+...++.+.++++++|++||+.        +++++.|+++|+++
T Consensus         9 k~H~~~~P~~GGi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~DD~~--------~l~~~~kl~~q~~~   79 (253)
T cd06854           9 SSHTKPTPRGGGIAFV-LAFLLALLLAAAAGPLNDLSYLLLLIGLLLLAAVGFIDDLR--------SLSPKIRLLVQLLA   79 (253)
T ss_pred             CCCCCCcCCcChHHHH-HHHHHHHHHHHHccccchhHHHHHHHHHHHHHHHHHHhhcc--------CCCHHHHHHHHHHH
Confidence            4568999999999999 6777665332 11   1223444566777889999999998        89999999999999


Q ss_pred             HHHHHH
Q 020939          297 GTWFSF  302 (319)
Q Consensus       297 All~~~  302 (319)
                      |+++..
T Consensus        80 a~~~~~   85 (253)
T cd06854          80 AALALY   85 (253)
T ss_pred             HHHHHH
Confidence            877654

The WbcO/WbpL substrate specificity has not yet been determined, but the structure of their biosynthetic end products implies that UDP-N-acetyl-D-fucosamine (UDP-FucNAc) and/or UDPN-acetyl-D-quinosamine (UDP-QuiNAc) are used. The subgroup of bacterial UDP-HexNAc:polyprenol-P HexNAc-1-P transferases includes the WbcO protein from Yersinia enterocolitica and the WbpL protein from Pseudomonas aeruginosa. These transferases initiate LPS O-antigen biosynthesis. Similar to other GlcNAc/MurNAc-1-P transferase family members, WbpL is a highly hydrophobic protein possessing 11 predicted transmembrane segments.

>cd06499 GT_MraY-like Glycosyltransferase 4 (GT4) includes both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine:polyprenol phosphate D-N-acetylhexosamine-1-phosphate transferases

Probab=99.24  E-value=4.5e-11  Score=107.27  Aligned_cols=83  Identities=27%  Similarity=0.421  Sum_probs=61.8

Q ss_pred             CCCccCchhHHHHHHHHHHHHHh-cCchhHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHHHH
Q 020939          226 RTPTMGGLFFVPIGIAVTIATVG-FSSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWL  304 (319)
Q Consensus       226 gTPTMGGLaIvpig~ivall~~~-~~s~~i~~lli~tLlf~lIGlIDDi~Kl~kk~n~GLspr~KLllQIlAAll~~~~l  304 (319)
                      +||+|||++++ ++++++.++.. ..+.+.+.++.++++++++|++||+++++|    |+++++|+++|+++++++..+.
T Consensus         1 ~tP~~GGi~i~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iG~~DD~~~l~~----gl~~~~kl~~q~~~a~~~~~~~   75 (185)
T cd06499           1 PTPTMGGLAIL-LGFLLGVLLYIPHSNTLILLALLSGLVAGIVGFIDDLLGLKV----ELSEREKLLLQILAALFLLLIG   75 (185)
T ss_pred             CCCCcccHHHH-HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhHHHhc----CCCHHHHHHHHHHHHHHHHHHH
Confidence            69999999999 67777664322 233444455667788899999999998865    9999999999999998765543


Q ss_pred             -hhcceecCC
Q 020939          305 -DATSIPSPY  313 (319)
Q Consensus       305 -~~~~IslPf  313 (319)
                       ....+..|+
T Consensus        76 ~~~~~~~~~~   85 (185)
T cd06499          76 GGHTTVTTPL   85 (185)
T ss_pred             HHhceeecCc
Confidence             234455554

They catalyze the transfer of a D-N-acetylhexosamine 1-phosphate to a membrane-bound polyprenol phosphate, which is the initiation step of protein N-glycosylation in eukaryotes and peptidoglycan biosynthesis in bacteria. One member, D-N-acetylhexosamine 1-phosphate transferase (GPT) is a eukaryotic enzyme, which is specific for UDP-GlcNAc as donor substrate and dolichol-phosphate as the membrane bound acceptor. The bacterial members MraY, WecA, and WbpL/WbcO utilize undecaprenol phosphate as the acceptor substrate, but use different UDP-sugar donor substrates. MraY-type transferases are highly specific for UDP-N-acetylmuramate-pentapeptide, whereas WecA proteins are selective for UDP-N-acetylglucosamine (UDP-GlcNAc). The WbcO/WbpL substrate specificity has not yet been determined, but the structure of thei

>cd06851 GT_GPT_like This family includes eukaryotic UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) and archaeal GPT-like glycosyltransferases

Probab=99.17  E-value=1.6e-10  Score=106.44  Aligned_cols=83  Identities=17%  Similarity=0.257  Sum_probs=60.0

Q ss_pred             CCCCCCCccCchhHHHHHHHHHHHHH-hc-----C---chhHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCCChHHHHHH
Q 020939          222 SRKGRTPTMGGLFFVPIGIAVTIATV-GF-----S---SLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLIL  292 (319)
Q Consensus       222 ~~K~gTPTMGGLaIvpig~ivall~~-~~-----~---s~~i~~lli~tLlf~lIGlIDDi~Kl~kk~n~GLspr~KLll  292 (319)
                      +.|.+||||||++++ ++++++.++. ..     .   ..+.+.+++++++++++|++||+.        +++++.|+++
T Consensus         8 ~~~~~tP~~GGi~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iG~lDD~~--------~l~~~~Kl~~   78 (223)
T cd06851           8 KGNVMIPEPGGISIL-IGFVASEITLIFFPFLSFPHFPISEILAALITSVLGFSVGIIDDRL--------TMGGWFKPVA   78 (223)
T ss_pred             CCCCCCCCcchHHHH-HHHHHHHHHHHHccccccccchHHHHHHHHHHHHHHHHHHHHHhcc--------cCCHHHHHHH
Confidence            457899999999999 6877776432 11     0   112344556677788999999998        8999999999


Q ss_pred             HHHHHHHHHHH-HhhcceecCC
Q 020939          293 EVAVGTWFSFW-LDATSIPSPY  313 (319)
Q Consensus       293 QIlAAll~~~~-l~~~~IslPf  313 (319)
                      |++++++++.. .....+..|+
T Consensus        79 q~~~a~~~~~~~~~~~~~~~~~  100 (223)
T cd06851          79 LAFAAAPILLLGAYDSNLDFPL  100 (223)
T ss_pred             HHHHHHHHHHHHHhccceeecc
Confidence            99998766543 2344556665

Eukaryotic GPT catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-linked glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. Evidence for the existence of the N-glycosylation pathway in archaea has emerged and genes responsible for the pathway have been identified. A glycosyl transferase gene Mv1751 in M. voltae encodes for the enzyme that carries out the first step in the pathway, the attachment of GlcNAc to a dolichol lipid carrier in the membrane. A lethal mutation in the alg7 (GPT) gene in Saccharomyces cerevisiae was successfully complemented with Mv1751, the archaeal gene, indicating eukaryotic and archaeal enzymes may use the

>cd06853 GT_WecA_like This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins

Probab=99.11  E-value=2.2e-10  Score=106.33  Aligned_cols=73  Identities=26%  Similarity=0.413  Sum_probs=56.3

Q ss_pred             CCCCCCCccCchhHHHHHHHHHHHHHhc----CchhHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCCChHHHHHHHHHHH
Q 020939          222 SRKGRTPTMGGLFFVPIGIAVTIATVGF----SSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVG  297 (319)
Q Consensus       222 ~~K~gTPTMGGLaIvpig~ivall~~~~----~s~~i~~lli~tLlf~lIGlIDDi~Kl~kk~n~GLspr~KLllQIlAA  297 (319)
                      .||++||++||++++ ++++++.++...    ...+...++++.++++++|++||+.        +++++.|+++|++++
T Consensus         3 ~H~~~~P~~GGi~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~DD~~--------~l~~~~kl~~q~~~a   73 (249)
T cd06853           3 VHKGPIPRLGGLAIF-LGFLLALLLALLFPFFLLPELLGLLAGATIIVLLGLLDDLF--------DLSPKVKLLGQILAA   73 (249)
T ss_pred             CCCCCCCCcCcHHHH-HHHHHHHHHHHhcccchhHHHHHHHHHHHHHHheehHHhcc--------CCCHHHHHHHHHHHH
Confidence            348899999999999 677777643221    1233444566777788999999997        999999999999999


Q ss_pred             HHHHHH
Q 020939          298 TWFSFW  303 (319)
Q Consensus       298 ll~~~~  303 (319)
                      ++++.+
T Consensus        74 ~~~~~~   79 (249)
T cd06853          74 LIVVFG   79 (249)
T ss_pred             HHHHHh
Confidence            877654

WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.

>cd06856 GT_GPT_archaea UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT)-like proteins in archaea

Probab=99.08  E-value=5.8e-10  Score=105.99  Aligned_cols=87  Identities=23%  Similarity=0.370  Sum_probs=63.5

Q ss_pred             CCcCC-CCCCCCccCchhHHHHHHHHHHHHHhc--CchhHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCCChHHHHHHHH
Q 020939          218 PARHS-RKGRTPTMGGLFFVPIGIAVTIATVGF--SSLQVSGASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEV  294 (319)
Q Consensus       218 P~~H~-~K~gTPTMGGLaIvpig~ivall~~~~--~s~~i~~lli~tLlf~lIGlIDDi~Kl~kk~n~GLspr~KLllQI  294 (319)
                      ++.|+ +|.+||+|||++++ ++++++.++...  ...+...+++++++++++|++||+.        +++++.|+++|+
T Consensus         3 ~d~hk~~~~~vP~~GGi~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lG~~DD~~--------~l~~~~Kl~~~~   73 (280)
T cd06856           3 RDVHKPGKPEVPEMGGIAVL-LGFSLGLLFLSALTHSVEALALLITSLLAGLIGLLDDIL--------GLSQSEKVLLTA   73 (280)
T ss_pred             ccccccCCCCCCCcchHHHH-HHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHhhhccc--------cCCHHHHHHHHH
Confidence            44564 36699999999999 687777643211  1223444567778889999999998        899999999999


Q ss_pred             HHHHHHHHHH-hhcceecCC
Q 020939          295 AVGTWFSFWL-DATSIPSPY  313 (319)
Q Consensus       295 lAAll~~~~l-~~~~IslPf  313 (319)
                      ++|+.+..+. ..+.+.+|+
T Consensus        74 ~aa~~l~~~~~~~~~~~~p~   93 (280)
T cd06856          74 LPAIPLLVLKAGNPLTSLPI   93 (280)
T ss_pred             HHHHHHHHHHHhcceeecCc
Confidence            9998876543 345556664

Eukaryotic GPT catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-linked glycosylation. Evidence for the existence of the N-glycosylation pathway in archaea has emerged and genes responsible for the pathway have been identified. A glycosyl transferase gene Mv1751 in M. voltae encodes for the enzyme that carries out the first step in the pathway, the attachment of GlcNAc to a dolichol lipid carrier in the membrane. A lethal mutation in the alg7 (GPT) gene in Saccharomyces cerevisiae was successfully complemented with Mv1751, the archaea gene, indicating that eukaryotic and archaeal enzymes may use the same substrates and are evolutionarily closer than the bacterial enzyme, which uses a different substrate.

>PF00953 Glycos_transf_4: Glycosyl transferase family 4; InterPro: IPR000715 This entry represents a family of UDP-GlcNAc/MurNAc: polyisoprenol-P GlcNAc/MurNAc-1-P transferases

Probab=97.52  E-value=0.00024  Score=62.14  Aligned_cols=51  Identities=39%  Similarity=0.530  Sum_probs=41.8

Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHHHH-hhcceecCCC
Q 020939          256 GASAATLAIALIGLIDDVICLVKNHSSGLSAWSRLILEVAVGTWFSFWL-DATSIPSPYG  314 (319)
Q Consensus       256 ~lli~tLlf~lIGlIDDi~Kl~kk~n~GLspr~KLllQIlAAll~~~~l-~~~~IslPfg  314 (319)
                      .++.+++.++++|++||+.        +++++.|+.+|++++.++..+. ..+.+..|+.
T Consensus         3 ~~l~~~~~~~~iG~~DD~~--------~l~~~~rl~~q~~~a~~~~~~~~~~~~~~~~~~   54 (159)
T PF00953_consen    3 LLLLALLLIGLIGLLDDLK--------GLSPRLRLLLQLLAALLLVFLGGGLTSLGIPFG   54 (159)
T ss_pred             HHHHHHHHHHHHHHHHHhc--------CCcHHHHHHHHHHHHHHHHHHHHHhcccccccC
Confidence            3466778899999999997        9999999999999999887654 4556667765

Members of the family include eukaryotic N-acetylglucosamine-1-phosphate transferases, which catalyse the conversion of UDP-N-acteyl-D-glucosamine and dolichyl phosphate to UMP and N-acetyl-D-glucosaminyl-diphosphodolichol in the glycosylation pathway; and bacterial phospho-N-acetylmuramoyl-pentapeptide-transferases, which catalyse the first step of the lipid cycle reactions in the biosynthesis of cell wall peptidoglycan.; GO: 0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity, 0016021 integral to membrane

>PF10555 MraY_sig1: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ; InterPro: IPR018480 Phospho-N-acetylmuramoyl-pentapeptide-transferase (2

Probab=97.47  E-value=2.3e-05  Score=43.10  Aligned_cols=13  Identities=62%  Similarity=1.170  Sum_probs=11.2

Q ss_pred             CCCCCccCchhHH
Q 020939          224 KGRTPTMGGLFFV  236 (319)
Q Consensus       224 K~gTPTMGGLaIv  236 (319)
                      |++||||||++|+
T Consensus         1 K~gTPTMGGi~~i   13 (13)
T PF10555_consen    1 KSGTPTMGGIVFI   13 (13)
T ss_pred             CCCCccceeEEEC
Confidence            6799999999874

7.8.13 from EC) (MraY) is a bacterial enzyme responsible for the formation of the first lipid intermediate of the cell wall peptidoglycan synthesis []. It catalyses the formation of undecaprenyl-pyrophosphoryl-N-acetylmuramoyl-pentapeptide from UDP-MurNAc-pentapeptide and undecaprenyl-phosphate. MraY is an integral membrane protein with probably ten transmembrane domains. It belongs to family 4 of glycosyl transferases. Homologues of MraY have been found in archaebacteria Methanobacterium thermoautotrophicum and in Arabidopsis thaliana (Mouse-ear cress). This entry represents two conserved sites found in these proteins. The first site is located at the end of the first cytoplasmic loop and the beginning of the second transmembrane domain. The second site is located in the third cytoplasmic loop.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00