Citrus Sinensis ID: 020962

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MTNIRFSFDRKDFVTEAKLCFVFYREMASKIWILLLGILFMVSATMGVPPRKPVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVQAKYCATQGKRWWDQKEFQDLDAFQYRRLKWVRSKFTIYNYCTDRSRFPVLPPECRRDRDI
ccccEEcccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEccccEEEEEEccccccEEEEccEEEEEEEEEEEEEEcccccEEEEEEEEEcccccccEEEEEEEcccccccEEEEEEEEEccccccEEEEEcccccccccEEEEEEEcccEEEEEEccEEEEEEEcccccccccccccccEEEEcccccccccccccEEEcccccccEEEEEEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHccccEEEEEEEcccccccccccccccccc
cccEEEEcccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEccccEEEEccccEEEEEEEccccccccccccEEEEEEEEEEEEcccccccEEEEEEEccccccccEEEEEEccccccccEEEEEEEEEcccccccEEEEEEEcccccccEEEEEEcccEEEEEEccccEEEEEccHHcccccccccccEEEEEccccccHccccccEEcccccccEEEEEcccccccEEccccccccccccccccccHHHHHccHHHHHHHHHHHHccEEEEcccccccccccccHccccccc
mtnirfsfdrkdfvtEAKLCFVFYREMASKIWILLLGILFMVsatmgvpprkpvnvpfgrnymptwafdhikyfnggseiQLHLdkytgtgfqskgsylfGHFSmqmklvpgdsagsVTAFYLSsqnsehdeidfeflgnrtgqpyilqtnvftggkgdreqriylwfdptkayHFYSVLWNMYQIVffvddipirvfknckdlgvrfpfnqpmkIYSSlwnaddwatrgglektdwskapfiasykgfhidgcEASVQAKYCATqgkrwwdqkefqdlDAFQYRRLKWVRSKFTIynyctdrsrfpvlppecrrdrdi
mtnirfsfdrkdfvteAKLCFVFYREMASKIWILLLGILFMVSATMGVPPRKPVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVQAKYCATQGKRWWDQKEFQDLDafqyrrlkwvrskftiynyctdrsrfpvlppecrrdrdi
MTNIRFSFDRKDFVTEAKLCFVFYREMASKIWILLLGILFMVSATMGVPPRKPVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVQAKYCATQGKRWWDQKEFQDLDAFQYRRLKWVRSKFTIYNYCTDRSRFPVLPPECRRDRDI
****RFSFDRKDFVTEAKLCFVFYREMASKIWILLLGILFMVSATMGVPPRKPVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSS****HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVQAKYCATQGKRWWDQKEFQDLDAFQYRRLKWVRSKFTIYNYCTDRSRFPV***********
***IR**FDRKDFVTEAKLCFVFYREMASKIWILLLGILFMVSATMGVPPRKPVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVQ****************************KWVRSKFTIYNYCTDRSRFPVLPPECRR****
MTNIRFSFDRKDFVTEAKLCFVFYREMASKIWILLLGILFMVSATMGVPPRKPVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVQAKYCATQGKRWWDQKEFQDLDAFQYRRLKWVRSKFTIYNYCTDRSRFPVLPP********
*TNIRFSFDRKDFVTEAKLCFVFYREMASKIWILLLGILFMVSATMGVPPRKPVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVQAKYCAT*GKRWWDQKEFQDLDAFQYRRLKWVRSKFTIYNYCTDRSRFPVLPPECR*****
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTNIRFSFDRKDFVTEAKLCFVFYREMASKIWILLLGILFMVSATMGVPPRKPVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVQAKYCATQGKRWWDQKEFQDLDAFQYRRLKWVRSKFTIYNYCTDRSRFPVLPPECRRDRDI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query319 2.2.26 [Sep-21-2011]
Q8LNZ5293 Probable xyloglucan endot N/A no 0.918 1.0 0.829 1e-151
Q9XIW1293 Probable xyloglucan endot yes no 0.896 0.976 0.832 1e-146
Q41638292 Xyloglucan endotransgluco N/A no 0.915 1.0 0.819 1e-146
Q6YDN9295 Xyloglucan endotransgluco N/A no 0.918 0.993 0.802 1e-144
Q39099296 Xyloglucan endotransgluco no no 0.890 0.959 0.818 1e-143
Q39857295 Probable xyloglucan endot no no 0.905 0.979 0.813 1e-142
Q41542293 Probable xyloglucan endot N/A no 0.858 0.935 0.799 1e-136
P93349295 Probable xyloglucan endot N/A no 0.896 0.969 0.744 1e-129
Q40144296 Probable xyloglucan endot N/A no 0.846 0.912 0.75 1e-125
Q8LG58291 Probable xyloglucan endot no no 0.815 0.893 0.571 1e-85
>sp|Q8LNZ5|XTHB_PHAAN Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1 Back     alignment and function desciption
 Score =  534 bits (1375), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 243/293 (82%), Positives = 273/293 (93%)

Query: 27  MASKIWILLLGILFMVSATMGVPPRKPVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDK 86
           MAS + IL L ++ + S+ +   PR+PV+VPFGRNY+PTWAFDHIKYFNGGSEIQLHLDK
Sbjct: 1   MASSLLILCLVLVSLASSALCAAPRRPVDVPFGRNYIPTWAFDHIKYFNGGSEIQLHLDK 60

Query: 87  YTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSSQNSEHDEIDFEFLGNRTGQPY 146
           YTGTGFQ+KGSYLFGHFSM +K+VPGDSAG+VTAF LSSQN+EHDEIDFEFLGNRTGQPY
Sbjct: 61  YTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNAEHDEIDFEFLGNRTGQPY 120

Query: 147 ILQTNVFTGGKGDREQRIYLWFDPTKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGV 206
           ILQTNVFTGGKGDREQRIYLWFDPTKAYH YSVLWNMYQIVF VD+IPIRVFKN K+LGV
Sbjct: 121 ILQTNVFTGGKGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGV 180

Query: 207 RFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVQAKYCATQ 266
           +FPFNQPMK+Y+SLWNADDWATRGGLEKTDWSKAPF+A YKGFH+DGCEASV +++CATQ
Sbjct: 181 KFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGCEASVNSRFCATQ 240

Query: 267 GKRWWDQKEFQDLDAFQYRRLKWVRSKFTIYNYCTDRSRFPVLPPECRRDRDI 319
           GKRWWDQ EF+DLD+FQ+RRLKWVR KFTIYNYCTDR+R+P LPPECRR+RDI
Sbjct: 241 GKRWWDQTEFRDLDSFQWRRLKWVRQKFTIYNYCTDRTRYPQLPPECRRNRDI 293
Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
Phaseolus angularis (taxid: 3914)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 7
>sp|Q9XIW1|XTH5_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1 Back     alignment and function description
>sp|Q41638|XTHA_PHAAN Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1 Back     alignment and function description
>sp|Q6YDN9|XTH_BRAOB Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1 Back     alignment and function description
>sp|Q39099|XTH4_ARATH Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1 Back     alignment and function description
>sp|Q39857|XTH_SOYBN Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q41542|XTH_WHEAT Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|P93349|XTH_TOBAC Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q40144|XTH1_SOLLC Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1 Back     alignment and function description
>sp|Q8LG58|XTH16_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
254554080293 xyloglucan endotransglycosylase [Shorea 0.918 1.0 0.904 1e-160
224053607293 predicted protein [Populus trichocarpa] 0.918 1.0 0.890 1e-158
82394881294 xyloglucan endotransglucosylase [Betula 0.918 0.996 0.887 1e-157
187372962293 xyloglucan endotransglucosylase/hydrolas 0.918 1.0 0.877 1e-157
124109187293 xyloglucan endotransglycosylase/hydrolas 0.918 1.0 0.883 1e-157
224075417294 predicted protein [Populus trichocarpa] 0.915 0.993 0.876 1e-157
950299293 xyloglucan endotransglycosylase precurso 0.918 1.0 0.873 1e-156
27228078294 xyloglucan endotransglycosylase precurso 0.915 0.993 0.880 1e-156
118481141294 unknown [Populus trichocarpa] 0.915 0.993 0.873 1e-156
157365245293 xyloglucan endotransglucosidase [Populus 0.918 1.0 0.877 1e-155
>gi|254554080|gb|ACT67416.1| xyloglucan endotransglycosylase [Shorea parvifolia subsp. parvifolia] Back     alignment and taxonomy information
 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 265/293 (90%), Positives = 278/293 (94%)

Query: 27  MASKIWILLLGILFMVSATMGVPPRKPVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDK 86
           MASKIW L LG+LF++S  M  PPRKPV+VPFGRNY+PTWAFDHIKYFNGGSEIQLHLD 
Sbjct: 1   MASKIWTLFLGVLFLISGAMAAPPRKPVDVPFGRNYVPTWAFDHIKYFNGGSEIQLHLDN 60

Query: 87  YTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSSQNSEHDEIDFEFLGNRTGQPY 146
           YTGTGFQSKGSYLFGHFSMQ+KLVPGDSAG+VTAFYLSSQNSEHDEIDFEFLGNRTGQPY
Sbjct: 61  YTGTGFQSKGSYLFGHFSMQIKLVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPY 120

Query: 147 ILQTNVFTGGKGDREQRIYLWFDPTKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGV 206
           ILQTNVFTGGKGDREQRIYLWFDPTK YH YSVLWNMYQIVFFVDDIPIRVFKNCKDLGV
Sbjct: 121 ILQTNVFTGGKGDREQRIYLWFDPTKGYHAYSVLWNMYQIVFFVDDIPIRVFKNCKDLGV 180

Query: 207 RFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVQAKYCATQ 266
           RFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYK FHIDGCEASV+AKYC TQ
Sbjct: 181 RFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKSFHIDGCEASVEAKYCDTQ 240

Query: 267 GKRWWDQKEFQDLDAFQYRRLKWVRSKFTIYNYCTDRSRFPVLPPECRRDRDI 319
           GKRWWDQKEFQDLD +Q+RRL+WVRSK+TIYNYCTDR R PVLP EC+RDRDI
Sbjct: 241 GKRWWDQKEFQDLDGYQWRRLRWVRSKYTIYNYCTDRVRSPVLPAECKRDRDI 293

Source: Shorea parvifolia subsp. parvifolia

Species: Shorea parvifolia

Genus: Shorea

Family: Dipterocarpaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224053607|ref|XP_002297895.1| predicted protein [Populus trichocarpa] gi|222845153|gb|EEE82700.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|82394881|gb|ABB72441.1| xyloglucan endotransglucosylase [Betula pendula] Back     alignment and taxonomy information
>gi|187372962|gb|ACD03215.1| xyloglucan endotransglucosylase/hydrolase 5 [Actinidia deliciosa] Back     alignment and taxonomy information
>gi|124109187|gb|ABM91069.1| xyloglucan endotransglycosylase/hydrolase precursor XTH-27 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224075417|ref|XP_002304625.1| predicted protein [Populus trichocarpa] gi|222842057|gb|EEE79604.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|950299|gb|AAC09388.1| xyloglucan endotransglycosylase precursor [Actinidia deliciosa] Back     alignment and taxonomy information
>gi|27228078|gb|AAN87142.1| xyloglucan endotransglycosylase precursor [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|118481141|gb|ABK92523.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|157365245|gb|ABV44821.1| xyloglucan endotransglucosidase [Populus euphratica] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
TAIR|locus:2159118293 XTH5 "xyloglucan endotransgluc 0.896 0.976 0.832 1.9e-138
TAIR|locus:2065821296 XTH4 "xyloglucan endotransgluc 0.912 0.983 0.802 8.5e-136
TAIR|locus:2095168291 XTH16 "xyloglucan endotransglu 0.815 0.893 0.571 9.4e-82
TAIR|locus:2169990292 XTH6 "xyloglucan endotransgluc 0.802 0.876 0.558 4.1e-81
TAIR|locus:2129445289 XTH15 "xyloglucan endotransglu 0.780 0.861 0.593 6.6e-81
TAIR|locus:2137609293 XTH7 "xyloglucan endotransgluc 0.799 0.870 0.544 1e-77
TAIR|locus:2125437290 XTH9 "xyloglucan endotransgluc 0.815 0.896 0.530 7.1e-77
TAIR|locus:2174597284 XTH25 "xyloglucan endotransglu 0.862 0.968 0.521 5e-76
TAIR|locus:2174497284 TCH4 "Touch 4" [Arabidopsis th 0.871 0.978 0.516 4.5e-75
TAIR|locus:2823919305 XTH8 "xyloglucan endotransgluc 0.868 0.908 0.505 5.1e-74
TAIR|locus:2159118 XTH5 "xyloglucan endotransglucosylase/hydrolase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1355 (482.0 bits), Expect = 1.9e-138, P = 1.9e-138
 Identities = 238/286 (83%), Positives = 259/286 (90%)

Query:    34 LLLGILFMVSATMGVPPRKPVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQ 93
             L L  L + +   GVPP+K +NVPFGRNY PTWAFDHIKY NGGSE+ L LDKYTGTGFQ
Sbjct:     8 LCLTFLILATVAFGVPPKKSINVPFGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQ 67

Query:    94 SKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVF 153
             SKGSYLFGHFSM +K+V GDSAG+VTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVF
Sbjct:    68 SKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVF 127

Query:   154 TGGKGDREQRIYLWFDPTKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPFNQP 213
             TGG G+REQRI LWFDP+K YH YSVLWNMYQIVFFVDD+PIRVFKN KD+GV+FPFNQP
Sbjct:   128 TGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQP 187

Query:   214 MKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVQAKYCATQGKRWWDQ 273
             MKIYSSLWNADDWATRGGLEKT+W KAPF+ASY+GFH+DGCEASV AK+C TQGKRWWDQ
Sbjct:   188 MKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQGKRWWDQ 247

Query:   274 KEFQDLDAFQYRRLKWVRSKFTIYNYCTDRSRFPVLPPECRRDRDI 319
             KEFQDLDA QY+RLKWVR ++TIYNYCTDR RFPV PPECRRDRDI
Sbjct:   248 KEFQDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPECRRDRDI 293
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IEA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006073 "cellular glucan metabolic process" evidence=IEA
GO:0016762 "xyloglucan:xyloglucosyl transferase activity" evidence=IEA
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS
GO:0048046 "apoplast" evidence=IEA
TAIR|locus:2065821 XTH4 "xyloglucan endotransglucosylase/hydrolase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095168 XTH16 "xyloglucan endotransglucosylase/hydrolase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169990 XTH6 "xyloglucan endotransglucosylase/hydrolase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129445 XTH15 "xyloglucan endotransglucosylase/hydrolase 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137609 XTH7 "xyloglucan endotransglucosylase/hydrolase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125437 XTH9 "xyloglucan endotransglucosylase/hydrolase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174597 XTH25 "xyloglucan endotransglucosylase/hydrolase 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174497 TCH4 "Touch 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2823919 XTH8 "xyloglucan endotransglucosylase/hydrolase 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q39099XTH4_ARATH2, ., 4, ., 1, ., 2, 0, 70.81810.89020.9594nono
Q41638XTHA_PHAAN2, ., 4, ., 1, ., 2, 0, 70.81910.91531.0N/Ano
Q39857XTH_SOYBN2, ., 4, ., 1, ., 2, 0, 70.81370.90590.9796nono
Q8LNZ5XTHB_PHAAN2, ., 4, ., 1, ., 2, 0, 70.82930.91841.0N/Ano
Q6YDN9XTH_BRAOB2, ., 4, ., 1, ., 2, 0, 70.80200.91840.9932N/Ano
Q41542XTH_WHEAT2, ., 4, ., 1, ., 2, 0, 70.79920.85890.9351N/Ano
P93349XTH_TOBAC2, ., 4, ., 1, ., 2, 0, 70.74480.89650.9694N/Ano
Q40144XTH1_SOLLC2, ., 4, ., 1, ., 2, 0, 70.750.84630.9121N/Ano
Q9XIW1XTH5_ARATH2, ., 4, ., 1, ., 2, 0, 70.83210.89650.9761yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.983
4th Layer2.4.1.2070.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_I8040
SubName- Full=Xyloglucan endotransglycosylase/hydrolase XTH-27; (293 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
cd02176263 cd02176, GH16_XET, Xyloglucan endotransglycosylase 1e-166
PLN03161291 PLN03161, PLN03161, Probable xyloglucan endotransg 1e-104
pfam00722174 pfam00722, Glyco_hydro_16, Glycosyl hydrolases fam 6e-77
cd02183203 cd02183, GH16_fungal_CRH1_transglycosylase, glycos 3e-26
cd00413210 cd00413, Glyco_hydrolase_16, glycosyl hydrolase fa 6e-25
cd02175212 cd02175, GH16_lichenase, lichenase, member of glyc 2e-24
pfam0695551 pfam06955, XET_C, Xyloglucan endo-transglycosylase 1e-21
COG2273355 COG2273, SKN1, Beta-glucanase/Beta-glucan syntheta 2e-12
cd08023235 cd08023, GH16_laminarinase_like, Laminarinase, mem 5e-06
cd02178258 cd02178, GH16_beta_agarase, Beta-agarase, member o 3e-04
>gnl|CDD|185685 cd02176, GH16_XET, Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
 Score =  462 bits (1190), Expect = e-166
 Identities = 151/263 (57%), Positives = 189/263 (71%), Gaps = 2/263 (0%)

Query: 53  PVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPG 112
            V   F  N+  TW  DHI+  N G+ +QL LD+ +G+GF+SK  YLFG FSM++KL PG
Sbjct: 1   AVAASFDENFFVTWGPDHIRVSNDGTSVQLTLDQSSGSGFKSKNKYLFGFFSMRIKLPPG 60

Query: 113 DSAGSVTAFYLSSQN-SEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPT 171
           DSAG+VTAFYLSSQ    HDEIDFEFLGN TGQPY LQTNVF  G G REQRIYLWFDPT
Sbjct: 61  DSAGTVTAFYLSSQGPDNHDEIDFEFLGNVTGQPYTLQTNVFANGVGGREQRIYLWFDPT 120

Query: 172 KAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPFNQPMKIYSSLWNADDWATRGG 231
             +H YS+LWN +QIVF+VDD+PIRVFKN + LGV +P +QPM +Y+S+W+  DWAT+GG
Sbjct: 121 ADFHTYSILWNPHQIVFYVDDVPIRVFKNNEALGVPYPSSQPMGVYASIWDGSDWATQGG 180

Query: 232 LEKTDWSKAPFIASYKGFHIDGCEASVQAKYC-ATQGKRWWDQKEFQDLDAFQYRRLKWV 290
             K DWS APF+ASY+ F +DGC       +   +  + WW+   +Q L A Q R ++WV
Sbjct: 181 RVKIDWSYAPFVASYRDFKLDGCVVDPGDSFSSCSCTEDWWNGSTYQQLSANQQRAMEWV 240

Query: 291 RSKFTIYNYCTDRSRFPVLPPEC 313
           R  + +Y+YC DR R+PV PPEC
Sbjct: 241 RRNYMVYDYCDDRKRYPVPPPEC 263

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. Length = 263
>gnl|CDD|178706 PLN03161, PLN03161, Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>gnl|CDD|216081 pfam00722, Glyco_hydro_16, Glycosyl hydrolases family 16 Back     alignment and domain information
>gnl|CDD|185692 cd02183, GH16_fungal_CRH1_transglycosylase, glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>gnl|CDD|185683 cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185684 cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|219239 pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus Back     alignment and domain information
>gnl|CDD|225182 COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185693 cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185687 cd02178, GH16_beta_agarase, Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 319
PLN03161291 Probable xyloglucan endotransglucosylase/hydrolase 100.0
cd02176263 GH16_XET Xyloglucan endotransglycosylase, member o 100.0
cd02183203 GH16_fungal_CRH1_transglycosylase glycosylphosphat 100.0
cd02175212 GH16_lichenase lichenase, member of glycosyl hydro 100.0
PF00722185 Glyco_hydro_16: Glycosyl hydrolases family 16; Int 100.0
cd00413210 Glyco_hydrolase_16 glycosyl hydrolase family 16. T 100.0
cd02178258 GH16_beta_agarase Beta-agarase, member of glycosyl 100.0
cd08023235 GH16_laminarinase_like Laminarinase, member of the 100.0
cd02177269 GH16_kappa_carrageenase Kappa-carrageenase, member 99.97
cd02180295 GH16_fungal_KRE6_glucanase Saccharomyces cerevisia 99.96
cd02182259 GH16_Strep_laminarinase_like Streptomyces laminari 99.96
cd08024330 GH16_CCF Coelomic cytolytic factor, member of glyc 99.95
cd02179321 GH16_beta_GRP beta-1,3-glucan recognition protein, 99.95
COG2273355 SKN1 Beta-glucanase/Beta-glucan synthetase [Carboh 99.93
PF0695551 XET_C: Xyloglucan endo-transglycosylase (XET) C-te 99.83
PF03935504 SKN1: Beta-glucan synthesis-associated protein (SK 99.58
cd02181293 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D- 99.47
PF09264198 Sial-lect-inser: Vibrio cholerae sialidase, lectin 94.49
PF13385157 Laminin_G_3: Concanavalin A-like lectin/glucanases 92.72
smart00560133 LamGL LamG-like jellyroll fold domain. 89.34
PF06439185 DUF1080: Domain of Unknown Function (DUF1080); Int 88.22
smart00159206 PTX Pentraxin / C-reactive protein / pentaxin fami 87.04
smart00210184 TSPN Thrombospondin N-terminal -like domains. Hepa 85.89
cd00152201 PTX Pentraxins are plasma proteins characterized b 82.19
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.7e-86  Score=627.48  Aligned_cols=267  Identities=47%  Similarity=0.928  Sum_probs=250.2

Q ss_pred             CCCcccccccCccccccCCCeEEecCCcEEEEEEcCCCeeEEEEcceeEEEEEEEEEEecCCCCCceEEEEEEeecCCCC
Q 020962           51 RKPVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSSQNSEH  130 (319)
Q Consensus        51 ~~~~~~~f~~~f~~~w~~~~v~~~~~G~~l~L~ld~~sga~i~Sk~~~~yG~fEariKlp~g~saG~v~AFwl~s~~~~~  130 (319)
                      +.++..+|.++|.++|+.+|+.+.++|+.|+|+||+.+|++|+||..|+||+||||||||+|+++|+||||||++.++.|
T Consensus        20 ~~~~~~~f~~~~~~~w~~~~~~~~~~g~~l~L~ld~~sgs~~~Sk~~f~yGr~E~riKLp~G~saG~v~AFwl~s~~~~~   99 (291)
T PLN03161         20 RSFVEADFSKSMYFTWGADHSSMLGNGDNLQLVLDQSSGSGIKSKRAFLFGSIEMLIKLVPGNSAGTVTAYYLSSTGSRH   99 (291)
T ss_pred             CCcccccccccceeeEcCCcEEEeCCCCEEEEEEeCCccCcEEecceEEEEEEEEEEEeCCCCCCCeEEEEEecCCCCCC
Confidence            34557899999999999999999888889999999999999999999999999999999999889999999999977789


Q ss_pred             CeEEEEEcCCCCCCceEEecceeeCCCCCcceeEEccCCCCCCcEEEEEEEcCceEEEEECCeEEEEEecccCCCCCCCC
Q 020962          131 DEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPF  210 (319)
Q Consensus       131 dEIDiEflGn~~g~p~~vqTNv~~~G~g~req~~~l~fDpt~dFHtYsI~Wtp~~I~fyVDG~~ir~~~~~~~~g~~~P~  210 (319)
                      |||||||||+.+++|+++|||+|.+|.++|++++.++|||+++||+|+|+|+|++|+|||||++||++++.+..|.+||+
T Consensus       100 dEIDiEfLG~~~g~~~~vqtN~y~~g~g~re~~~~l~fDpt~dFHtYsI~Wtp~~I~wyVDG~~iRt~~~~~~~g~~yP~  179 (291)
T PLN03161        100 DEIDFEFLGNVSGQPYTIHTNIYTQGNGSREQQFRPWFDPTADFHNYTIHWNPSEVVWYVDGTPIRVFRNYENEGIAYPN  179 (291)
T ss_pred             CeEEEEecCCCCCCceEEEeceEeCCcCCcceeccccCCCccCcEEEEEEEchhhEEEEECCEEEEEEEcccccCCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987777889998


Q ss_pred             CCCcEEEEEeecCCCccCCCCCcccCCCCCCEEEEEeEEEEeeeecCCC--CcccccC-CCccccccccCCCCHHHHHHH
Q 020962          211 NQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVQ--AKYCATQ-GKRWWDQKEFQDLDAFQYRRL  287 (319)
Q Consensus       211 ~~Pm~l~lnlW~Gg~Wat~GG~~~id~s~aPf~a~~~~~~v~~c~~~~~--~~~c~~~-~~~~~~~~~~~~l~~~~~~~~  287 (319)
                      ++||+|++|||+|++|||+||++||||+++||+|.|++|+++||.++++  ...|... +..||+++.|++|+++|+++|
T Consensus       180 ~~pM~i~~siW~g~~wAt~gG~~kidw~~aPf~a~~~~f~~~~C~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~  259 (291)
T PLN03161        180 KQGMRVYSSLWNADNWATQGGRVKIDWTLAPFVARGRRFRARACKWNGPVSIKQCADPTPSNWWTSPSYSQLTNAQLTQM  259 (291)
T ss_pred             ccceEEEEeeecCCCcccCCCceeccCCcCCeeEEeeeEEEEeeccCCCCCccccCCCCccccccCccccCCCHHHHHHH
Confidence            8999999999999999999999999999999999999999999987643  3479754 467999999999999999999


Q ss_pred             HHHhhcCeeeecccCCCCCCC-CCCCCcCCC
Q 020962          288 KWVRSKFTIYNYCTDRSRFPV-LPPECRRDR  317 (319)
Q Consensus       288 ~~~~~~~~~y~yc~d~~r~~~-~p~ec~~~~  317 (319)
                      +|||+||||||||+|++|||+ +||||.++.
T Consensus       260 ~~v~~~~m~Y~YC~D~~R~~~~~p~EC~~~~  290 (291)
T PLN03161        260 KKVRDNFMIYDYCKDTKRFNGVMPPECFKPQ  290 (291)
T ss_pred             HHHHhCcEEEeccCCCCcCCCCcCcccCCCc
Confidence            999999999999999999999 899998753

>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16 Back     alignment and domain information
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16 Back     alignment and domain information
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET) Back     alignment and domain information
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1 Back     alignment and domain information
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A Back     alignment and domain information
>PF09264 Sial-lect-inser: Vibrio cholerae sialidase, lectin insertion; InterPro: IPR015344 This domain is predominantly found in Vibrio cholerae sialidase, and adopt a beta sandwich structure consisting of 12-14 strands arranged in two beta-sheets Back     alignment and domain information
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A Back     alignment and domain information
>smart00560 LamGL LamG-like jellyroll fold domain Back     alignment and domain information
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function Back     alignment and domain information
>smart00159 PTX Pentraxin / C-reactive protein / pentaxin family Back     alignment and domain information
>smart00210 TSPN Thrombospondin N-terminal -like domains Back     alignment and domain information
>cd00152 PTX Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated in innate immunity Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
1umz_A278 Xyloglucan Endotransglycosylase In Complex With The 1e-152
2vh9_A290 Crystal Structure Of Nxg1-Deltayniig In Complex Wit 3e-52
2uwb_A267 Crystal Structure Of The Nasturtium Seedling Mutant 5e-50
2uwc_A271 Crystal Structure Of Nasturtium Xyloglucan Hydrolas 2e-48
2uwa_A274 Crystal Structure Of The Nasturtium Seedling Xylogl 3e-48
3d6e_A201 Crystal Structure Of The Engineered 1,3-1,4-Beta-Gl 7e-15
1mac_A212 Crystal Structure And Site-Directed Mutagenesis Of 6e-11
1byh_A214 Molecular And Active-Site Structure Of A Bacillus ( 1e-10
1cpn_A208 Native-Like In Vivo Folding Of A Circularly Permute 6e-10
1u0a_A214 Crystal Structure Of The Engineered Beta-1,3-1,4-En 7e-10
1axk_A 394 Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Le 7e-10
1cpm_A214 Native-Like In Vivo Folding Of A Circularly Permute 8e-10
3o5s_A238 Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanas 4e-09
1gbg_A214 Bacillus Licheniformis Beta-Glucanase Length = 214 3e-08
1ajk_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 1e-07
3i4i_A234 Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glu 2e-07
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. Length = 278 Back     alignment and structure 
Iteration: 1

 Score =  533 bits (1373), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 245/269 (91%), Positives = 260/269 (96%)
Query: 51  RKPVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLV 110
           RKPV+V FGRNY+PTWAFDHIKYFNGG+EIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLV
Sbjct: 10  RKPVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLV 69
Query: 111 PGDSAGSVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDP 170
           PGDSAG+VTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDP
Sbjct: 70  PGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDP 129
Query: 171 TKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPFNQPMKIYSSLWNADDWATRG 230
           TK +H+YSVLWNMY IVF VDD+PIRVFKNCKDLGV+FPFNQPMKIYSSLWNADDWATRG
Sbjct: 130 TKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRG 189
Query: 231 GLEKTDWSKAPFIASYKGFHIDGCEASVQAKYCATQGKRWWDQKEFQDLDAFQYRRLKWV 290
           GLEKTDWSKAPFIASY+ FHIDGCEASV+AK+CATQG RWWDQKEFQDLDAFQYRRL WV
Sbjct: 190 GLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWV 249
Query: 291 RSKFTIYNYCTDRSRFPVLPPECRRDRDI 319
           R K+TIYNYCTDRSR+P +PPEC+RDRDI
Sbjct: 250 RQKYTIYNYCTDRSRYPSMPPECKRDRDI 278
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide Length = 290 Back     alignment and structure
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig Length = 267 Back     alignment and structure
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 Length = 271 Back     alignment and structure
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 Length = 274 Back     alignment and structure
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase Protein From Bacillus Licheniformis Length = 201 Back     alignment and structure
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase Length = 212 Back     alignment and structure
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus (1-3,1-4)- Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 208 Back     alignment and structure
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With Beta-Glucan Tetrasaccharide Length = 214 Back     alignment and structure
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Length = 394 Back     alignment and structure
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 214 Back     alignment and structure
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) Length = 238 Back     alignment and structure
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-84 Length = 214 Back     alignment and structure
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase (Lichenase) Derived From A Mouse Hindgut Metagenome Length = 234 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 1e-130
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 1e-101
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 3e-66
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 9e-65
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 4e-64
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1e-60
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 2e-58
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 5e-52
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 1e-47
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 1e-17
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 1e-17
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 3e-07
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 4e-07
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 4e-07
3rq0_A269 Glycosyl hydrolases family protein 16; structural 6e-07
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 7e-07
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 8e-07
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 3e-06
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 3e-06
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 8e-06
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 1e-05
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 5e-04
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 9e-04
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Length = 278 Back     alignment and structure
 Score =  370 bits (951), Expect = e-130
 Identities = 245/276 (88%), Positives = 260/276 (94%)

Query: 44  ATMGVPPRKPVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHF 103
                  RKPV+V FGRNY+PTWAFDHIKYFNGG+EIQLHLDKYTGTGFQSKGSYLFGHF
Sbjct: 3   TAAFAALRKPVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHF 62

Query: 104 SMQMKLVPGDSAGSVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQR 163
           SMQMKLVPGDSAG+VTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQR
Sbjct: 63  SMQMKLVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQR 122

Query: 164 IYLWFDPTKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPFNQPMKIYSSLWNA 223
           IYLWFDPTK +H+YSVLWNMY IVF VDD+PIRVFKNCKDLGV+FPFNQPMKIYSSLWNA
Sbjct: 123 IYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNA 182

Query: 224 DDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVQAKYCATQGKRWWDQKEFQDLDAFQ 283
           DDWATRGGLEKTDWSKAPFIASY+ FHIDGCEASV+AK+CATQG RWWDQKEFQDLDAFQ
Sbjct: 183 DDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQ 242

Query: 284 YRRLKWVRSKFTIYNYCTDRSRFPVLPPECRRDRDI 319
           YRRL WVR K+TIYNYCTDRSR+P +PPEC+RDRDI
Sbjct: 243 YRRLSWVRQKYTIYNYCTDRSRYPSMPPECKRDRDI 278
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Length = 274 Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Length = 238 Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Length = 208 Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Length = 214 Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Length = 234 Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Length = 394 Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Length = 240 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Length = 280 Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Length = 271 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Length = 245 Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Length = 269 Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Length = 288 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Length = 272 Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Length = 266 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Length = 420 Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Length = 264 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Length = 324 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Length = 363 Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Length = 251 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query319
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 100.0
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 100.0
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 100.0
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 100.0
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 100.0
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 100.0
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 100.0
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 100.0
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 100.0
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 100.0
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 100.0
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 100.0
3rq0_A269 Glycosyl hydrolases family protein 16; structural 100.0
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 100.0
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 100.0
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 100.0
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 100.0
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 100.0
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 100.0
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 100.0
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 100.0
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 99.98
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 99.97
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 99.94
2w39_A298 Putative laminarinase; hydrolase, white ROT fungus 99.93
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.86
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.79
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 96.81
3flp_A217 SAP-like pentraxin; physiological doubly-stacked h 93.9
4dqa_A355 Uncharacterized protein; two domains structure, DU 82.7
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Back     alignment and structure
Probab=100.00  E-value=7.8e-82  Score=594.34  Aligned_cols=264  Identities=91%  Similarity=1.603  Sum_probs=249.9

Q ss_pred             ccccccCccccccCCCeEEecCCcEEEEEEcCCCeeEEEEcceeEEEEEEEEEEecCCCCCceEEEEEEeecCCCCCeEE
Q 020962           55 NVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSSQNSEHDEID  134 (319)
Q Consensus        55 ~~~f~~~f~~~w~~~~v~~~~~G~~l~L~ld~~sga~i~Sk~~~~yG~fEariKlp~g~saG~v~AFwl~s~~~~~dEID  134 (319)
                      +.+|.++|+++|+++||++.++|+.|+|+|++++||+|+||+.|+||+||||||+|+|+++|+||||||++++|.+||||
T Consensus        14 ~~~f~~~~~~~w~~~nv~~~~~G~~l~L~l~~~tsa~i~Sk~~f~YGr~Ear~Klp~g~s~G~wpAfwll~~~p~~gEID   93 (278)
T 1umz_A           14 DVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDEID   93 (278)
T ss_dssp             CCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCCEEE
T ss_pred             CCcccCCceeeECCCCEEEeCCCCEEEEEECCCccCEEEECcEEECEEEEEEEEeCCCCCCceEEEEEEecCCCCCCeEE
Confidence            68999999999999999999889899999999999999999999999999999999998899999999999888999999


Q ss_pred             EEEcCCCCCCceEEecceeeCCCCCcceeEEccCCCCCCcEEEEEEEcCceEEEEECCeEEEEEecccCCCCCCCCCCCc
Q 020962          135 FEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPFNQPM  214 (319)
Q Consensus       135 iEflGn~~g~p~~vqTNv~~~G~g~req~~~l~fDpt~dFHtYsI~Wtp~~I~fyVDG~~ir~~~~~~~~g~~~P~~~Pm  214 (319)
                      ||++|+.+++|+++|+|+|.+|.+++++++.+++||+++||+|+|+|+|++|+|||||+++|++++.+..+.+|||++||
T Consensus        94 mE~lG~~~g~~~tvhtn~~~~g~~~~~~~~~l~~d~~~dFHtY~i~Wtp~~I~fyVDG~~v~t~~~~~~~g~~~Pf~~P~  173 (278)
T 1umz_A           94 FEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPM  173 (278)
T ss_dssp             EEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSSCB
T ss_pred             EEEeCCCCCCceEEEEEEecCCCCCCcceEecCCCCccCcEEEEEEEecCeEEEEECCeEEEEEecCcCcCccCcCCCce
Confidence            99999999999999999999999999999999999999999999999999999999999999999877667889999999


Q ss_pred             EEEEEeecCCCccCCCCCcccCCCCCCEEEEEeEEEEeeeecCCCCcccccCCCccccccccCCCCHHHHHHHHHHhhcC
Q 020962          215 KIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVQAKYCATQGKRWWDQKEFQDLDAFQYRRLKWVRSKF  294 (319)
Q Consensus       215 ~l~lnlW~Gg~Wat~GG~~~id~s~aPf~a~~~~~~v~~c~~~~~~~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  294 (319)
                      +|+||||+||+|+++||++++||+++||+++|+.+++.+|.++.+.+.|.+.+..||+++++++|++.|+++|+|||+||
T Consensus       174 ~lilnlw~GG~Wa~~gG~~~~d~~~~p~v~~vr~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  253 (278)
T 1umz_A          174 KIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKY  253 (278)
T ss_dssp             EEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTTTTCSGGGSGGGSSCCHHHHHHHHHHHHHT
T ss_pred             EEEEEEEECCcccCCCCccccCCCCCCEEEEEEEEEEecccCCCCCCccCCCcccccccCccccCCHHHHHHHHHHHHCC
Confidence            99999999999999999889999999999999999999999764445698766789999999999999999999999999


Q ss_pred             eeeecccCCCCCCCCCCCCcCCCC
Q 020962          295 TIYNYCTDRSRFPVLPPECRRDRD  318 (319)
Q Consensus       295 ~~y~yc~d~~r~~~~p~ec~~~~~  318 (319)
                      ||||||+|++|||++||||.++.+
T Consensus       254 ~~y~yc~d~~r~~~~~~ec~~~~~  277 (278)
T 1umz_A          254 TIYNYCTDRSRYPSMPPECKRDRD  277 (278)
T ss_dssp             EEEEGGGCTTTCSSCCTHHHHHTC
T ss_pred             eEEecCCCCCcCCCCCcccCCCCC
Confidence            999999999999999999986654
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Back     alignment and structure
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A* Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Back     alignment and structure
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 319
d1umza_267 b.29.1.2 (A:) Xyloglucan endotransglycosylase {Eur 1e-125
d1ajka_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bac 4e-44
d1mvea_243 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fib 1e-23
d2ayha_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {syn 2e-20
d1dypa_271 b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseud 3e-10
d1o4ya_270 b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivo 5e-07
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Length = 267 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

 Score =  355 bits (913), Expect = e-125
 Identities = 243/267 (91%), Positives = 258/267 (96%)

Query: 53  PVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPG 112
           PV+V FGRNY+PTWAFDHIKYFNGG+EIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPG
Sbjct: 1   PVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPG 60

Query: 113 DSAGSVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTK 172
           DSAG+VTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTK
Sbjct: 61  DSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTK 120

Query: 173 AYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPFNQPMKIYSSLWNADDWATRGGL 232
            +H+YSVLWNMY IVF VDD+PIRVFKNCKDLGV+FPFNQPMKIYSSLWNADDWATRGGL
Sbjct: 121 EFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGL 180

Query: 233 EKTDWSKAPFIASYKGFHIDGCEASVQAKYCATQGKRWWDQKEFQDLDAFQYRRLKWVRS 292
           EKTDWSKAPFIASY+ FHIDGCEASV+AK+CATQG RWWDQKEFQDLDAFQYRRL WVR 
Sbjct: 181 EKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQ 240

Query: 293 KFTIYNYCTDRSRFPVLPPECRRDRDI 319
           K+TIYNYCTDRSR+P +PPEC+RDRDI
Sbjct: 241 KYTIYNYCTDRSRYPSMPPECKRDRDI 267
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Length = 214 Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Length = 243 Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Length = 214 Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Length = 271 Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Length = 270 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query319
d1umza_267 Xyloglucan endotransglycosylase {European aspen (P 100.0
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 100.0
d2ayha_214 Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid 100.0
d1mvea_243 Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succi 100.0
d1dypa_271 kappa-Carrageenase, catalytic {Pseudoalteromonas c 99.96
d1o4ya_270 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.96
d1o4za_295 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.96
d1upsa1266 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 99.95
d2slia1196 Leech intramolecular trans-sialidase, N-terminal d 92.95
d1epwa1218 Botulinum neurotoxin {Clostridium botulinum, serot 92.11
d1b09a_206 C-reactive protein (CRP) {Human (Homo sapiens) [Ta 90.11
d1a8da1247 Tetanus neurotoxin {Clostridium tetani [TaxId: 151 89.96
d2erfa1206 Thrombospondin 1 N-terminal domain {Human (Homo sa 89.85
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 89.57
d1saca_204 Serum amyloid P component (SAP) {Human (Homo sapie 87.24
d3btaa1207 Botulinum neurotoxin {Clostridium botulinum, serot 87.21
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 81.64
d1w0pa1192 Vibrio cholerae sialidase, N-terminal and insertio 81.16
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

Probab=100.00  E-value=5.1e-84  Score=603.97  Aligned_cols=267  Identities=91%  Similarity=1.604  Sum_probs=256.1

Q ss_pred             CcccccccCccccccCCCeEEecCCcEEEEEEcCCCeeEEEEcceeEEEEEEEEEEecCCCCCceEEEEEEeecCCCCCe
Q 020962           53 PVNVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSSQNSEHDE  132 (319)
Q Consensus        53 ~~~~~f~~~f~~~w~~~~v~~~~~G~~l~L~ld~~sga~i~Sk~~~~yG~fEariKlp~g~saG~v~AFwl~s~~~~~dE  132 (319)
                      |+..+|+++|.++|+++|+++.++|..|+|+||+++||+|+||+.|+||+||||||||+|+++|++++||++++++.++|
T Consensus         1 ~~~~~f~~~~~~~w~~~~v~~~~~g~~l~l~ld~~sga~i~Sk~~f~YG~~EariKlp~G~g~g~~~~f~~~s~~~~~dE   80 (267)
T d1umza_           1 PVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDE   80 (267)
T ss_dssp             CCCCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCCE
T ss_pred             CccccCCCCceecCCCCCEEEeCCCeEEEEEECCcccCceEecceEEeeEEEEEEEcCCCCccEEEEEeeecCCCCCCCe
Confidence            45789999999999999999999999999999999999999999999999999999999988999999999998889999


Q ss_pred             EEEEEcCCCCCCceEEecceeeCCCCCcceeEEccCCCCCCcEEEEEEEcCceEEEEECCeEEEEEecccCCCCCCCCCC
Q 020962          133 IDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHFYSVLWNMYQIVFFVDDIPIRVFKNCKDLGVRFPFNQ  212 (319)
Q Consensus       133 IDiEflGn~~g~p~~vqTNv~~~G~g~req~~~l~fDpt~dFHtYsI~Wtp~~I~fyVDG~~ir~~~~~~~~g~~~P~~~  212 (319)
                      ||||++|+..++++++|||+|.+|.+++++++.+++||+++||+|+|+|+|++|+|||||++||++++.+..+.++|+++
T Consensus        81 IDiE~lG~~~~~~~~v~tn~~~~g~g~~~~~~~~~~d~s~dFHtY~i~Wtp~~I~fyVDG~~vr~~~n~~~~g~~~p~~~  160 (267)
T d1umza_          81 IDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQ  160 (267)
T ss_dssp             EEEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSS
T ss_pred             EEEEEecccCCcccEEEeeEeCCCCCCcceeEecCCCCccCcEEEEEEECcceEEEEECCEEEEEEeccccCCCCCCcce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999888889999999


Q ss_pred             CcEEEEEeecCCCccCCCCCcccCCCCCCEEEEEeEEEEeeeecCCCCcccccCCCccccccccCCCCHHHHHHHHHHhh
Q 020962          213 PMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVQAKYCATQGKRWWDQKEFQDLDAFQYRRLKWVRS  292 (319)
Q Consensus       213 Pm~l~lnlW~Gg~Wat~GG~~~id~s~aPf~a~~~~~~v~~c~~~~~~~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  292 (319)
                      ||+|++|||+||+|||+||+++|||+++||+|.|++|+|+||.++...+.|...+..||+++.+++|+++|+++|+|||+
T Consensus       161 pm~i~~niW~g~~Wat~gG~~~~d~~~aPf~a~~~~~~v~~c~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  240 (267)
T d1umza_         161 PMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQ  240 (267)
T ss_dssp             CBEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTTTTCSGGGSGGGSSCCHHHHHHHHHHHH
T ss_pred             EEEEEEeeeeCCCccccCCeeeecCCCCCEEEEEEEEEEEecccCCCCcccCCCCCccccccccccCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998776677776777899999999999999999999999


Q ss_pred             cCeeeecccCCCCCCCCCCCCcCCCCC
Q 020962          293 KFTIYNYCTDRSRFPVLPPECRRDRDI  319 (319)
Q Consensus       293 ~~~~y~yc~d~~r~~~~p~ec~~~~~~  319 (319)
                      ||||||||+|++|||.+||||.+|+++
T Consensus       241 ~~~~y~yC~d~~r~~~~p~EC~~~~~~  267 (267)
T d1umza_         241 KYTIYNYCTDRSRYPSMPPECKRDRDI  267 (267)
T ss_dssp             HTEEEEGGGCTTTCSSCCTHHHHHTCC
T ss_pred             CCcEEccCCCCCcCCCCCcccCCCCCC
Confidence            999999999999999999999998875
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1o4za_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure
>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Back     information, alignment and structure
>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]} Back     information, alignment and structure
>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} Back     information, alignment and structure
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d1w0pa1 b.29.1.8 (A:25-216) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure