Citrus Sinensis ID: 020992
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 319 | ||||||
| 255552636 | 325 | conserved hypothetical protein [Ricinus | 0.952 | 0.935 | 0.468 | 8e-66 | |
| 224092576 | 317 | predicted protein [Populus trichocarpa] | 0.943 | 0.949 | 0.432 | 1e-61 | |
| 296088935 | 357 | unnamed protein product [Vitis vinifera] | 0.931 | 0.831 | 0.405 | 4e-56 | |
| 147853875 | 815 | hypothetical protein VITISV_002672 [Viti | 0.645 | 0.252 | 0.456 | 3e-44 | |
| 255552634 | 278 | hypothetical protein RCOM_0851370 [Ricin | 0.789 | 0.906 | 0.403 | 5e-44 | |
| 147821434 | 1115 | hypothetical protein VITISV_009110 [Viti | 0.927 | 0.265 | 0.362 | 2e-37 | |
| 359473339 | 308 | PREDICTED: uncharacterized protein LOC10 | 0.880 | 0.912 | 0.355 | 5e-37 | |
| 225424697 | 310 | PREDICTED: uncharacterized protein LOC10 | 0.877 | 0.903 | 0.363 | 8e-37 | |
| 147857441 | 225 | hypothetical protein VITISV_020549 [Viti | 0.351 | 0.497 | 0.586 | 1e-32 | |
| 356565944 | 215 | PREDICTED: uncharacterized protein LOC10 | 0.598 | 0.888 | 0.390 | 2e-30 |
| >gi|255552636|ref|XP_002517361.1| conserved hypothetical protein [Ricinus communis] gi|223543372|gb|EEF44903.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 256 bits (655), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 149/318 (46%), Positives = 199/318 (62%), Gaps = 14/318 (4%)
Query: 4 DDSRIAMKEKLEFVGIIKEALKIPIKNPKFIFTILLTSFPLFCSLCLHETMFQRALIESL 63
++ + MK+KLEF GIIKE+LK+ +N FI LTSFP FC L E FQ+ LI+++
Sbjct: 3 NNPVLMMKDKLEFFGIIKESLKLIPRNTSFIILTFLTSFPYFCFLLFLEINFQQPLIDAI 62
Query: 64 RSQADDPPPHEGF--VITVRSSGPSLYAFRDWIGNFISRKLLVQSFTLLAIIHLFDLLNT 121
+S+ P + F +I + + R+ I + LL L + HL LLNT
Sbjct: 63 KSKLTTPTYDDPFGKIIDLSWQPRPIDVIRELILDVFLPSLL-PGLLYLGMAHLLHLLNT 121
Query: 122 IITVSTASAIYAEE-----KEMMTKPFIENKVALFKGPLITSIYALLLNSLALVGLFTLS 176
I TV +AS +YA E KEM+ +PF + KGPLITS YAL+L++L L+G+ +LS
Sbjct: 122 ITTVYSASMVYAGEGTANLKEMLCRPF---RTVGLKGPLITSTYALILSTLTLIGILSLS 178
Query: 177 INIYVMWS--AFTFFTLTYMLLFVALFTKYIEWSAVWNTGIVISILEQNKHGDVALGVSA 234
+ +V S A + F + L +AL TKYIEWSA+WN G+VISIL++ KHGDVALGVSA
Sbjct: 179 THFFVTSSIHAASIFKTAFGLAIIALLTKYIEWSAIWNMGMVISILDE-KHGDVALGVSA 237
Query: 235 YISRGSRKRGFLIMLVFFAWSFGLRLSSLCVGWQKGNVVIEVILAQACLDCLGSVMKWVA 294
YISRG RKRGFL MLVFF W RL + W + ++ V + + C+G+VMKWV
Sbjct: 238 YISRGCRKRGFLSMLVFFVWWVSFRLICVYGVWTESISLVMVSVGEVFSVCVGNVMKWVV 297
Query: 295 FMIYFYDCKKRFIEKKFD 312
F +YFYDCKKRF+EKK D
Sbjct: 298 FTVYFYDCKKRFLEKKVD 315
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224092576|ref|XP_002309669.1| predicted protein [Populus trichocarpa] gi|222855645|gb|EEE93192.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|296088935|emb|CBI38501.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147853875|emb|CAN79559.1| hypothetical protein VITISV_002672 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255552634|ref|XP_002517360.1| hypothetical protein RCOM_0851370 [Ricinus communis] gi|223543371|gb|EEF44902.1| hypothetical protein RCOM_0851370 [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|147821434|emb|CAN74577.1| hypothetical protein VITISV_009110 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359473339|ref|XP_002264915.2| PREDICTED: uncharacterized protein LOC100262202 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225424697|ref|XP_002264874.1| PREDICTED: uncharacterized protein LOC100267371 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147857441|emb|CAN80792.1| hypothetical protein VITISV_020549 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356565944|ref|XP_003551195.1| PREDICTED: uncharacterized protein LOC100786983 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 319 | ||||||
| TAIR|locus:2199832 | 354 | AT1G23850 "AT1G23850" [Arabido | 0.347 | 0.313 | 0.341 | 7.4e-22 | |
| TAIR|locus:2034913 | 338 | AT1G23840 [Arabidopsis thalian | 0.379 | 0.357 | 0.361 | 6.2e-21 | |
| TAIR|locus:2034908 | 345 | AT1G23830 "AT1G23830" [Arabido | 0.357 | 0.330 | 0.314 | 3.1e-17 | |
| TAIR|locus:2054005 | 287 | AT2G18680 "AT2G18680" [Arabido | 0.639 | 0.710 | 0.266 | 5.9e-11 | |
| TAIR|locus:2054016 | 322 | AT2G18690 "AT2G18690" [Arabido | 0.865 | 0.857 | 0.244 | 2e-09 |
| TAIR|locus:2199832 AT1G23850 "AT1G23850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 194 (73.4 bits), Expect = 7.4e-22, Sum P(2) = 7.4e-22
Identities = 42/123 (34%), Positives = 72/123 (58%)
Query: 198 VALFTKYIEWSAVWNTGIVISILEQNKHGDV-----ALGVSAYISRGSRKRGFLIMLVFF 252
+A+F+K WSA WN G+V+S+LE+ ++G AL +S+ +G KRG +MLVF
Sbjct: 224 LAMFSK---WSAGWNMGLVVSVLEEEENGQSIYGTDALTLSSNYGKGHEKRGLQVMLVFL 280
Query: 253 AWSFGLRLSSLCVGWQK---GNVVIEVILAQACLDCLGSVMKWVAFMIYFYDCKKRFIEK 309
++ +R+ C + GN V+ + C+G+++KWVA ++++ DC+ +EK
Sbjct: 281 VFAIAMRMPCFCFKCTESSNGNRVLYTSFYVGLI-CVGNMIKWVACVVFYEDCRTSVLEK 339
Query: 310 KFD 312
K D
Sbjct: 340 KGD 342
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| TAIR|locus:2034913 AT1G23840 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2034908 AT1G23830 "AT1G23830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2054005 AT2G18680 "AT2G18680" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2054016 AT2G18690 "AT2G18690" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00020771001 | SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (321 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 319 | |||
| PF06161 | 243 | DUF975: Protein of unknown function (DUF975); Inte | 97.58 | |
| PF10110 | 149 | GPDPase_memb: Membrane domain of glycerophosphoryl | 96.74 | |
| PF06790 | 248 | UPF0259: Uncharacterised protein family (UPF0259); | 95.31 | |
| PRK02868 | 245 | hypothetical protein; Provisional | 91.49 |
| >PF06161 DUF975: Protein of unknown function (DUF975); InterPro: IPR010380 This is a family of uncharacterised bacterial proteins | Back alignment and domain information |
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Probab=97.58 E-value=0.0031 Score=58.04 Aligned_cols=67 Identities=24% Similarity=0.170 Sum_probs=48.2
Q ss_pred CcchhhhhhhcchhhccCCceehhHHHHHHHHHHHHHHHhhhcccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 020992 222 QNKHGDVALGVSAYISRGSRKRGFLIMLVFFAWSFGLRLSSLCVGWQKGNVVIEVILAQACLDCLGSVMKWVAFMIYFYD 301 (319)
Q Consensus 222 ~~~~G~~Al~ks~~L~kG~~~~g~~l~l~f~~~~~~l~~~~~~~~~~~~~~~i~~~~v~v~L~~~v~L~~~v~~tVfY~~ 301 (319)
||.-..+|+++|+++|||++++-+.+.+.|..|...--..+ |+. . --+.-+--++++.||-+
T Consensus 177 ~~~~~~~al~~S~~lmkg~k~~~f~l~Lsfigw~~L~~~t~----------gi~--~------l~~~pY~~~~~a~fY~~ 238 (243)
T PF06161_consen 177 PELGAFEALKRSRKLMKGNKWRLFLLDLSFIGWYILGLLTF----------GIG--L------LWVIPYINTAQAEFYEE 238 (243)
T ss_pred cCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH----------HHH--H------HHHHHHHHHHHHHHHHH
Confidence 34567889999999999999999999998887733221111 111 1 12236788999999999
Q ss_pred ccccc
Q 020992 302 CKKRF 306 (319)
Q Consensus 302 CKs~h 306 (319)
.|+++
T Consensus 239 l~~~~ 243 (243)
T PF06161_consen 239 LRKRK 243 (243)
T ss_pred HHhcC
Confidence 99874
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| >PF10110 GPDPase_memb: Membrane domain of glycerophosphoryl diester phosphodiesterase; InterPro: IPR018476 Members of this family comprise the membrane domain of the prokaryotic enzyme glycerophosphoryl diester phosphodiesterase [] | Back alignment and domain information |
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| >PF06790 UPF0259: Uncharacterised protein family (UPF0259); InterPro: IPR009627 This is a group of proteins of unknown function | Back alignment and domain information |
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| >PRK02868 hypothetical protein; Provisional | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00