Citrus Sinensis ID: 021007

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MGVDIESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQQKYRKLSDVLWEAISNGQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLKRSGNKSIGTKANLIIAATAGACTAIITQPLDTASSRMQTSAFGKSKGLWKTLTEGTWSDAFDGLGISLLLTSNPAIQYTVFDQLKRRMLKGKQNKAGGTSPQALSAFAAFVLGAVSKSIATVLTYPAIRCKVMIQAADPNENGTEKTQPRSRKTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKIAATTWVLILAIRRYLFLTRGRLKSA
ccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHcccccHHccHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHcHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
cccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccccccHHHHHHHHHHHcccHHEHccccHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccHHHHHHHHHHHccccEEHccccccHccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcccHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccc
mgvdieslseatsGAIGSLLsttilypldtcktkYQAEVRAHGQQKYRKLSDVLWEAISNGQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLkrsgnksigtKANLIIAATAGACTAiitqpldtassrmqtsafgkSKGLWKTltegtwsdafdgLGISLlltsnpaiqyTVFDQLKRRMLKgkqnkaggtspQALSAFAAFVLGAVSKSIATVLTYPAIRCKVMIqaadpnengtektqprsrkTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKIAATTWVLILAIRRYLFLTRGRLKSA
MGVDIESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQQKYRKLSDVLWEAISNGQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLKRSGNKSIGTKANLIIAATAGACTAIITQPLDTASSRMQTSAFGKSKGLWKTLTEGTWSDAFDGLGISLLLTSNPAIQYTVFDQLKRRMLKGKQNKAGGTSPQALSAFAAFVLGAVSKSIATVLTYPAIRCKVMIQaadpnengtektqprsrkTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKIAATTWVLILAIRRYLFLtrgrlksa
MGVDIESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQQKYRKLSDVLWEAISNGQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLKRSGNKSIGTKANLiiaatagactaiitQPLDTASSRMQTSAFGKSKGLWKTLTEGTWSDAFDGLGISLLLTSNPAIQYTVFDQLKRRMLKGKQNKAGGTSPQALSAFAAFVLGAVSKSIATVLTYPAIRCKVMIQAADPNENGTEKTQPRSRKTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKIAATTWVLILAIRRYLFLTRGRLKSA
**************AIGSLLSTTILYPLDTCKTKYQAEVRAHGQQKYRKLSDVLWEAISNGQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLKRSGNKSIGTKANLIIAATAGACTAIITQPLDT********AFGKSKGLWKTLTEGTWSDAFDGLGISLLLTSNPAIQYTVFDQLKRRM**************ALSAFAAFVLGAVSKSIATVLTYPAIRCKVMIQA*****************TLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKIAATTWVLILAIRRYLFLTR******
****IESLSEATSGAIGSLLSTTILYPLDTCKTK******************VLWEAISNGQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRL************KANLIIAATAGACTAIITQPLDTASSRMQTSAFGKSKGLWKTLTEGTWSDAFDGLGISLLLTSNPAIQYTVFDQLKRRML***************SAFAAFVLGAVSKSIATVLTYPAIRCKVM*******************KTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKIAATTWVLILAIRRY***********
********SEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQQKYRKLSDVLWEAISNGQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLKRSGNKSIGTKANLIIAATAGACTAIITQPLDTASSRMQTSAFGKSKGLWKTLTEGTWSDAFDGLGISLLLTSNPAIQYTVFDQLKRRMLK*********SPQALSAFAAFVLGAVSKSIATVLTYPAIRCKVMIQAADP************RKTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKIAATTWVLILAIRRYLFLTRGRLKSA
***DIESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQQKYRKLSDVLWEAISNGQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLKRSGNKSIGTKANLIIAATAGACTAIITQPLDTASSRMQTSAFGKSKGLWKTLTEGTWSDAFDGLGISLLLTSNPAIQYTVFDQLKRRMLKGKQNKAGGTSPQALSAFAAFVLGAVSKSIATVLTYPAIRCKVMIQAADPNENGT*KTQPRSRKTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKIAATTWVLILAIRRYLFLTRGRLK**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGVDIESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQQKYRKLSDVLWEAISNGQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLKRSGNKSIGTKANLIIAATAGACTAIITQPLDTASSRMQTSAFGKSKGLWKTLTEGTWSDAFDGLGISLLLTSNPAIQYTVFDQLKRRMLKGKQNKAGGTSPQALSAFAAFVLGAVSKSIATVLTYPAIRCKVMIQAADPNENGTEKTQPRSRKTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKIAATTWVLILAIRRYLFLTRGRLKSA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query318 2.2.26 [Sep-21-2011]
Q9MA90322 Peroxisomal adenine nucle yes no 0.996 0.984 0.797 1e-146
Q8VZS0321 Peroxisomal adenine nucle no no 0.993 0.984 0.778 1e-139
B6ZJZ9318 Peroxisomal adenine nucle yes no 0.993 0.993 0.798 1e-136
Q76P23329 Mitochondrial substrate c yes no 0.921 0.890 0.281 3e-30
O43808307 Peroxisomal membrane prot yes no 0.877 0.908 0.297 7e-30
Q06497328 Peroxisomal adenine nucle yes no 0.930 0.902 0.261 9e-27
O70579307 Peroxisomal membrane prot yes no 0.874 0.905 0.303 1e-25
Q75A82340 Peroxisomal adenine nucle no no 0.867 0.811 0.262 4e-23
O04200331 Peroxisomal nicotinamide no no 0.786 0.755 0.290 2e-22
Q00319419 Peroxisomal membrane prot N/A no 0.918 0.696 0.256 3e-22
>sp|Q9MA90|PNC1_ARATH Peroxisomal adenine nucleotide carrier 1 OS=Arabidopsis thaliana GN=PNC1 PE=1 SV=1 Back     alignment and function desciption
 Score =  518 bits (1334), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 256/321 (79%), Positives = 290/321 (90%), Gaps = 4/321 (1%)

Query: 1   MGVDIESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQQKYRKLSDVLWEAISN 60
           MGVD+ES+SEATSGAIGSLLSTTILYPLDTCK+K+QAEVRA GQQKYR LSDV+WEAIS 
Sbjct: 1   MGVDLESVSEATSGAIGSLLSTTILYPLDTCKSKFQAEVRARGQQKYRYLSDVMWEAISK 60

Query: 61  GQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLKRSGNKSIGTKANLIIAATAGACT 120
           GQV SLYQGLGTKN QSFISQF+YFY YSYFKR++ +R+G+KSIGTKANL+IAA AGACT
Sbjct: 61  GQVFSLYQGLGTKNFQSFISQFIYFYSYSYFKRVHSERTGSKSIGTKANLLIAAAAGACT 120

Query: 121 AIITQPLDTASSRMQTSAFGKSKGLWKTLTEGTWSDAFDGLGISLLLTSNPAIQYTVFDQ 180
           +++ QPLDTASSRMQTS FG+SKGLWKTLTEG+W+DAFDGLGISLLLTSNPAIQYTVFDQ
Sbjct: 121 SVLIQPLDTASSRMQTSEFGESKGLWKTLTEGSWADAFDGLGISLLLTSNPAIQYTVFDQ 180

Query: 181 LKRRMLKGKQNKA-GGTSPQALSAFAAFVLGAVSKSIATVLTYPAIRCKVMIQAADPN-E 238
           LK+ +LK K  KA  G+SP  LSAF AFVLGAVSKS+ATVLTYPAIRCKVMIQAAD + E
Sbjct: 181 LKQHLLKQKNAKAENGSSPVVLSAFMAFVLGAVSKSVATVLTYPAIRCKVMIQAADESKE 240

Query: 239 NGTEKTQPRSRKTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKIAATTW 298
           N T+K + R+RKT+ GVV AIW++EG+LGFFKGL AQILKTVLSSALLLMIKEKI ATTW
Sbjct: 241 NETKKPRRRTRKTIPGVVYAIWRKEGMLGFFKGLQAQILKTVLSSALLLMIKEKITATTW 300

Query: 299 VLILAIRRYLFL--TRGRLKS 317
           +LILAIRR LFL  T+G+L+S
Sbjct: 301 ILILAIRRTLFLTNTKGKLRS 321
Peroxisomal adenine nucleotide transporter catalyzing the counterexchange of ATP with AMP. ATP is needed by reactions that generate acyl-CoA for peroxisomal fatty acid beta-oxidation during postgerminative growth. Required for the beta-oxidation reactions involved in auxin biosynthesis and for the conversion of seed-reserved triacylglycerols into sucrose that is necessary for growth before the onset of photosynthesis.
Arabidopsis thaliana (taxid: 3702)
>sp|Q8VZS0|PNC2_ARATH Peroxisomal adenine nucleotide carrier 2 OS=Arabidopsis thaliana GN=PNC2 PE=1 SV=1 Back     alignment and function description
>sp|B6ZJZ9|PNC1_SOYBN Peroxisomal adenine nucleotide carrier 1 OS=Glycine max GN=PNC1 PE=2 SV=1 Back     alignment and function description
>sp|Q76P23|PM34_DICDI Mitochondrial substrate carrier family protein Q OS=Dictyostelium discoideum GN=mcfQ PE=2 SV=1 Back     alignment and function description
>sp|O43808|PM34_HUMAN Peroxisomal membrane protein PMP34 OS=Homo sapiens GN=SLC25A17 PE=1 SV=1 Back     alignment and function description
>sp|Q06497|ANT1_YEAST Peroxisomal adenine nucleotide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ANT1 PE=1 SV=1 Back     alignment and function description
>sp|O70579|PM34_MOUSE Peroxisomal membrane protein PMP34 OS=Mus musculus GN=Slc25a17 PE=2 SV=1 Back     alignment and function description
>sp|Q75A82|ANT1_ASHGO Peroxisomal adenine nucleotide transporter 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ANT1 PE=3 SV=1 Back     alignment and function description
>sp|O04200|PXN_ARATH Peroxisomal nicotinamide adenine dinucleotide carrier OS=Arabidopsis thaliana GN=PXN PE=1 SV=1 Back     alignment and function description
>sp|Q00319|PM47B_CANBO Peroxisomal membrane protein PMP47B OS=Candida boidinii GN=PMP47B PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query318
18397181322 peroxisomal adenine nucleotide carrier 1 0.996 0.984 0.797 1e-144
21594600322 unknown [Arabidopsis thaliana] 0.996 0.984 0.794 1e-144
224131524317 predicted protein [Populus trichocarpa] 0.993 0.996 0.835 1e-144
297833234322 mitochondrial substrate carrier family p 0.996 0.984 0.800 1e-144
255542618318 peroxisomal membrane protein pmp34, puta 0.996 0.996 0.843 1e-143
224123206317 predicted protein [Populus trichocarpa] 0.996 1.0 0.811 1e-142
225450977322 PREDICTED: peroxisomal membrane protein 1.0 0.987 0.805 1e-138
449442831317 PREDICTED: peroxisomal membrane protein 0.993 0.996 0.802 1e-138
147801320322 hypothetical protein VITISV_015341 [Viti 1.0 0.987 0.805 1e-138
297808769321 mitochondrial substrate carrier family p 0.993 0.984 0.778 1e-138
>gi|18397181|ref|NP_566251.1| peroxisomal adenine nucleotide carrier 1 [Arabidopsis thaliana] gi|75264909|sp|Q9MA90.1|PNC1_ARATH RecName: Full=Peroxisomal adenine nucleotide carrier 1; Short=AtPNC1 gi|6729039|gb|AAF27035.1|AC009177_25 unknown protein [Arabidopsis thaliana] gi|15081797|gb|AAK82553.1| AT3g05290/T12H1_26 [Arabidopsis thaliana] gi|23507743|gb|AAN38675.1| At3g05290/T12H1_26 [Arabidopsis thaliana] gi|332640695|gb|AEE74216.1| peroxisomal adenine nucleotide carrier 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 256/321 (79%), Positives = 290/321 (90%), Gaps = 4/321 (1%)

Query: 1   MGVDIESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQQKYRKLSDVLWEAISN 60
           MGVD+ES+SEATSGAIGSLLSTTILYPLDTCK+K+QAEVRA GQQKYR LSDV+WEAIS 
Sbjct: 1   MGVDLESVSEATSGAIGSLLSTTILYPLDTCKSKFQAEVRARGQQKYRYLSDVMWEAISK 60

Query: 61  GQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLKRSGNKSIGTKANLIIAATAGACT 120
           GQV SLYQGLGTKN QSFISQF+YFY YSYFKR++ +R+G+KSIGTKANL+IAA AGACT
Sbjct: 61  GQVFSLYQGLGTKNFQSFISQFIYFYSYSYFKRVHSERTGSKSIGTKANLLIAAAAGACT 120

Query: 121 AIITQPLDTASSRMQTSAFGKSKGLWKTLTEGTWSDAFDGLGISLLLTSNPAIQYTVFDQ 180
           +++ QPLDTASSRMQTS FG+SKGLWKTLTEG+W+DAFDGLGISLLLTSNPAIQYTVFDQ
Sbjct: 121 SVLIQPLDTASSRMQTSEFGESKGLWKTLTEGSWADAFDGLGISLLLTSNPAIQYTVFDQ 180

Query: 181 LKRRMLKGKQNKA-GGTSPQALSAFAAFVLGAVSKSIATVLTYPAIRCKVMIQAADPN-E 238
           LK+ +LK K  KA  G+SP  LSAF AFVLGAVSKS+ATVLTYPAIRCKVMIQAAD + E
Sbjct: 181 LKQHLLKQKNAKAENGSSPVVLSAFMAFVLGAVSKSVATVLTYPAIRCKVMIQAADESKE 240

Query: 239 NGTEKTQPRSRKTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKIAATTW 298
           N T+K + R+RKT+ GVV AIW++EG+LGFFKGL AQILKTVLSSALLLMIKEKI ATTW
Sbjct: 241 NETKKPRRRTRKTIPGVVYAIWRKEGMLGFFKGLQAQILKTVLSSALLLMIKEKITATTW 300

Query: 299 VLILAIRRYLFL--TRGRLKS 317
           +LILAIRR LFL  T+G+L+S
Sbjct: 301 ILILAIRRTLFLTNTKGKLRS 321

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|21594600|gb|AAM66025.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224131524|ref|XP_002328561.1| predicted protein [Populus trichocarpa] gi|222838276|gb|EEE76641.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297833234|ref|XP_002884499.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] gi|297330339|gb|EFH60758.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255542618|ref|XP_002512372.1| peroxisomal membrane protein pmp34, putative [Ricinus communis] gi|223548333|gb|EEF49824.1| peroxisomal membrane protein pmp34, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224123206|ref|XP_002319020.1| predicted protein [Populus trichocarpa] gi|222857396|gb|EEE94943.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225450977|ref|XP_002284763.1| PREDICTED: peroxisomal membrane protein PMP34 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449442831|ref|XP_004139184.1| PREDICTED: peroxisomal membrane protein PMP34-like [Cucumis sativus] gi|449482864|ref|XP_004156426.1| PREDICTED: peroxisomal membrane protein PMP34-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147801320|emb|CAN77030.1| hypothetical protein VITISV_015341 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297808769|ref|XP_002872268.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] gi|297318105|gb|EFH48527.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query318
TAIR|locus:2096344322 PNC1 "peroxisomal adenine nucl 0.996 0.984 0.772 2.1e-125
UNIPROTKB|B6ZJZ9318 PNC1 "Peroxisomal adenine nucl 0.993 0.993 0.764 3.1e-122
TAIR|locus:2146355321 PNC2 "peroxisomal adenine nucl 0.993 0.984 0.750 6.7e-120
ASPGD|ASPL0000056747336 antA [Emericella nidulans (tax 0.880 0.833 0.332 2e-31
DICTYBASE|DDB_G0272346329 mcfQ "mitochondrial substrate 0.927 0.896 0.280 2.6e-31
FB|FBgn0052250314 CG32250 [Drosophila melanogast 0.883 0.894 0.309 2.8e-27
ZFIN|ZDB-GENE-070620-4312 slc25a17 "solute carrier famil 0.883 0.900 0.295 3.5e-27
RGD|1311498307 Slc25a17 "solute carrier famil 0.874 0.905 0.306 9.4e-27
MGI|MGI:1342248307 Slc25a17 "solute carrier famil 0.874 0.905 0.303 2.5e-26
UNIPROTKB|F1PTI5307 SLC25A17 "Uncharacterized prot 0.874 0.905 0.306 4e-26
TAIR|locus:2096344 PNC1 "peroxisomal adenine nucleotide carrier 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1232 (438.7 bits), Expect = 2.1e-125, P = 2.1e-125
 Identities = 248/321 (77%), Positives = 278/321 (86%)

Query:     1 MGVDIESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQQKYRKLSDVLWEAISN 60
             MGVD+ES+SEATSGAIGSLLSTTILYPLDTCK+K+QAEVRA GQQKYR LSDV+WEAIS 
Sbjct:     1 MGVDLESVSEATSGAIGSLLSTTILYPLDTCKSKFQAEVRARGQQKYRYLSDVMWEAISK 60

Query:    61 GQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLKRSGNKSIGTKANLXXXXXXXXXX 120
             GQV SLYQGLGTKN QSFISQF+YFY YSYFKR++ +R+G+KSIGTKANL          
Sbjct:    61 GQVFSLYQGLGTKNFQSFISQFIYFYSYSYFKRVHSERTGSKSIGTKANLLIAAAAGACT 120

Query:   121 XXXXQPLDTASSRMQTSAFGKSKGLWKTLTEGTWSDAFDGLGISLLLTSNPAIQYTVFDQ 180
                 QPLDTASSRMQTS FG+SKGLWKTLTEG+W+DAFDGLGISLLLTSNPAIQYTVFDQ
Sbjct:   121 SVLIQPLDTASSRMQTSEFGESKGLWKTLTEGSWADAFDGLGISLLLTSNPAIQYTVFDQ 180

Query:   181 LKRRMLKGKQNKA-GGTSPQALSAFAAFVLGAVSKSIATVLTYPAIRCKVMIQAADPN-E 238
             LK+ +LK K  KA  G+SP  LSAF AFVLGAVSKS+ATVLTYPAIRCKVMIQAAD + E
Sbjct:   181 LKQHLLKQKNAKAENGSSPVVLSAFMAFVLGAVSKSVATVLTYPAIRCKVMIQAADESKE 240

Query:   239 NGTEKTQPRSRKTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKIAATTW 298
             N T+K + R+RKT+ GVV AIW++EG+LGFFKGL AQILKTVLSSALLLMIKEKI ATTW
Sbjct:   241 NETKKPRRRTRKTIPGVVYAIWRKEGMLGFFKGLQAQILKTVLSSALLLMIKEKITATTW 300

Query:   299 VLILAIRRYLFLT--RGRLKS 317
             +LILAIRR LFLT  +G+L+S
Sbjct:   301 ILILAIRRTLFLTNTKGKLRS 321
GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0005347 "ATP transmembrane transporter activity" evidence=IGI;ISS;IDA
GO:0005777 "peroxisome" evidence=IDA
GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP
GO:0015217 "ADP transmembrane transporter activity" evidence=ISS;IDA
GO:0015866 "ADP transport" evidence=IDA
GO:0015867 "ATP transport" evidence=IDA
GO:0080024 "indolebutyric acid metabolic process" evidence=IMP
GO:0090351 "seedling development" evidence=IGI
GO:0007031 "peroxisome organization" evidence=RCA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=RCA
GO:0051788 "response to misfolded protein" evidence=RCA
GO:0080129 "proteasome core complex assembly" evidence=RCA
UNIPROTKB|B6ZJZ9 PNC1 "Peroxisomal adenine nucleotide carrier 1" [Glycine max (taxid:3847)] Back     alignment and assigned GO terms
TAIR|locus:2146355 PNC2 "peroxisomal adenine nucleotide carrier 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000056747 antA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0272346 mcfQ "mitochondrial substrate carrier family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0052250 CG32250 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070620-4 slc25a17 "solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1311498 Slc25a17 "solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1342248 Slc25a17 "solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1PTI5 SLC25A17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9MA90PNC1_ARATHNo assigned EC number0.79750.99680.9844yesno
Q8VZS0PNC2_ARATHNo assigned EC number0.77880.99370.9844nono
B6ZJZ9PNC1_SOYBNNo assigned EC number0.79870.99370.9937yesno
O70579PM34_MOUSENo assigned EC number0.30320.87420.9055yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
PNC1
PNC1 (PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1); ADP transmembrane transporter/ ATP transmembrane transporter/ binding; encodes a peroxisomal adenine nucleotide transporter, involved in fatty acid beta-oxidation during early stage of postgerminative growth. (322 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
MBAC1
MBAC1; L-histidine transmembrane transporter/ L-lysine transmembrane transporter/ L-ornithine t [...] (311 aa)
      • 0.780
SAMC1
SAMC1 (S-ADENOSYLMETHIONINE CARRIER 1); S-adenosylmethionine transmembrane transporter/ binding [...] (325 aa)
      • 0.679
LACS7
LACS7 (LONG-CHAIN ACYL-COA SYNTHETASE 7); long-chain-fatty-acid-CoA ligase/ protein binding; En [...] (700 aa)
      • 0.659
SAMC2
SAMC2 (S-adenosylmethionine carrier 2); binding; S-adenosylmethionine carrier 2 (SAMC2); FUNCTI [...] (345 aa)
      • 0.657
LACS6
LACS6 (long-chain acyl-CoA synthetase 6); long-chain-fatty-acid-CoA ligase; encode peroxisomal [...] (701 aa)
      • 0.565
AT1G54350
ABC transporter family protein; ABC transporter family protein; FUNCTIONS IN- ATPase activity, [...] (706 aa)
      • 0.534
BAC2
BAC2; L-ornithine transmembrane transporter/ binding / carnitine-acyl carnitine antiporter; enc [...] (296 aa)
      • 0.508
PUMP1
PUMP1 (PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1); binding / oxidative phosphorylation uncoupler [...] (306 aa)
      • 0.502
CSY2
CSY2 (citrate synthase 2); citrate (SI)-synthase; Encodes a peroxisomal citrate synthase that i [...] (514 aa)
   •  • 0.449
NTT1
NTT1 (NUCLEOTIDE TRANSPORTER 1); ATP-ADP antiporter; NUCLEOTIDE TRANSPORTER 1 (NTT1); FUNCTIONS [...] (624 aa)
      • 0.438

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query318
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-10
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 7e-10
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-09
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-07
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-05
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information 
 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 8  LSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQQKYRKLSDVLWEAISNGQVHSLY 67
          L+   +G I   ++ T+ YPLD  KT+ Q+   A G +KY+ + D   +      +  LY
Sbjct: 6  LASLLAGGIAGAIAATVTYPLDVVKTRLQS-SAAGGSRKYKGILDCFKKIYKEEGIRGLY 64

Query: 68 QGLGTKNLQSFISQFVYFYGYSYFKRLYLKRS 99
          +GL    L+   +  +YF  Y   K+L LK+ 
Sbjct: 65 KGLLPNLLRVAPAAAIYFGTYETLKKLLLKKL 96

Length = 96
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 318
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.97
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 99.97
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 99.97
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.97
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.96
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 99.96
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.95
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.95
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.93
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.93
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.92
KOG0766297 consensus Predicted mitochondrial carrier protein 99.92
KOG0765333 consensus Predicted mitochondrial carrier protein 99.92
KOG0036463 consensus Predicted mitochondrial carrier protein 99.92
KOG0769308 consensus Predicted mitochondrial carrier protein 99.91
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.91
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.91
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.91
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.9
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.88
KOG1519297 consensus Predicted mitochondrial carrier protein 99.88
KOG2745321 consensus Mitochondrial carrier protein [General f 99.87
KOG2954427 consensus Mitochondrial carrier protein [General f 99.86
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.79
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.67
KOG2745321 consensus Mitochondrial carrier protein [General f 99.54
KOG1519297 consensus Predicted mitochondrial carrier protein 99.54
KOG2954427 consensus Mitochondrial carrier protein [General f 98.37
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=1.8e-57  Score=370.13  Aligned_cols=281  Identities=26%  Similarity=0.380  Sum_probs=250.0

Q ss_pred             hhHHHHHHHhHHHHHHHhhhchHHHHHHHHhhcccc-cCccCcCcHHHHHHHHHHcCCccccccchhhhhhhhhhhhhHH
Q 021007            6 ESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRA-HGQQKYRKLSDVLWEAISNGQVHSLYQGLGTKNLQSFISQFVY   84 (318)
Q Consensus         6 ~~~~~~~~g~~a~~~~~~i~~Pld~ik~~~q~~~~~-~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~   84 (318)
                      ..+...++|.++|+++++++||+|.+|+|.|++... ...+.|++++++++.|++.||++|||+|+.|++++..++.++|
T Consensus         4 ~~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiY   83 (299)
T KOG0764|consen    4 VQWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLY   83 (299)
T ss_pred             cchhhhhhhhhhhhhhhhhccchhHhhhhhhhccCccccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHH
Confidence            345567999999999999999999999999999544 3567899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhccCCCCCChHHHHHHHHHHHHHHHhhhccHHHHHHhHhccCCC--------CchhHHHHHHhcchhh
Q 021007           85 FYGYSYFKRLYLKRSGNKSIGTKANLIIAATAGACTAIITQPLDTASSRMQTSAFG--------KSKGLWKTLTEGTWSD  156 (318)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~v~~Pld~ik~r~q~~~~~--------~~~~~~~~~~~~G~~~  156 (318)
                      |.+||.+|..+.+..+....++..++.+++.||.++.++++|+.++|+|++.+...        .++++++++++||++|
T Consensus        84 F~~Y~~~K~~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~~~~~Y~~~f~a~rki~k~EG~rg  163 (299)
T KOG0764|consen   84 FFFYDFLKSFITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNVQSTAYKGMFDALRKIYKEEGFRG  163 (299)
T ss_pred             HHHHHHHHHHHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccccccccccHHHHHHHHHHHHhHHH
Confidence            99999999999776665555888999999999999999999999999999987642        3478889999999999


Q ss_pred             cccccchhhhcchhhhHHHHHHHHHHHHHHccccCCCCCCCCCcccHHHHHHHHHHHHHhHHHhcchhHHHHHHHHhcCC
Q 021007          157 AFDGLGISLLLTSNPAIQYTVFDQLKRRMLKGKQNKAGGTSPQALSAFAAFVLGAVSKSIATVLTYPAIRCKVMIQAADP  236 (318)
Q Consensus       157 ly~G~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~t~P~dvv~~r~q~~~~  236 (318)
                      ||+|+.|.++.+...+++|..||.+|....+...+..    ...++....+..+.++.++|+.+|||++|+|+|||.++.
T Consensus       164 LY~GlVP~L~GvshgAiQF~~YE~lK~~~~~~~~~~~----d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~~~  239 (299)
T KOG0764|consen  164 LYKGLVPGLLGVSHGAIQFPAYEELKLRKNRKQGRST----DNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQSD  239 (299)
T ss_pred             HHhhhhhHhhhhchhhhhhhhHHHHHHHHHHhcCCCc----ccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhccc
Confidence            9999999999999999999999999999974433221    123455666777779999999999999999999999974


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHhhCcccccccchhhhhhHhhhhHHHHHHHHHHHHHHHH
Q 021007          237 NENGTEKTQPRSRKTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKIAATTWV  299 (318)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~~~~~~~~i~~~~ye~~~~~~~~  299 (318)
                      ..         +|.++++|++++|+.||++|||||+.++++|.+|.+.++|.+||.+++++..
T Consensus       240 ~~---------~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv~~~L~~  293 (299)
T KOG0764|consen  240 NP---------RYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENVKHFLVT  293 (299)
T ss_pred             Cc---------ccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHHHHHHhc
Confidence            32         5999999999999999999999999999999999999999999999998853

>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query318
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-27
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-19
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-11
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-07
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-23
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 7e-19
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  107 bits (270), Expect = 2e-27
 Identities = 56/299 (18%), Positives = 117/299 (39%), Gaps = 36/299 (12%)

Query: 13  SGAIGSLLSTTILYPLDTCKTKYQ---AEVRAHGQQKYRKLSDVLWEAISNGQVHSLYQG 69
           +G + + +S T + P++  K   Q   A  +   +++Y+ + D +          S ++G
Sbjct: 13  AGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRG 72

Query: 70  LGTKNLQSFISQFVYFYGYSYFKRLYLKRSGNKSIGTK---ANLIIAATAGACTAIITQP 126
                ++ F +Q + F     +K+++L          +    NL     AGA +     P
Sbjct: 73  NLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYP 132

Query: 127 LDTASSRMQT-----SAFGKSKGLW----KTLTEGTWSDAFDGLGISLL-LTSNPAIQYT 176
           LD A +R+       +A  +  GL     K          + G  +S+  +    A  + 
Sbjct: 133 LDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFG 192

Query: 177 VFDQLKRRMLKGKQNKAGGTSPQALSAFAAFVLGAVSKSIATVLTYPA--IRCKVMIQAA 234
           V+D  K  +   K           +    ++++     ++A +++YP   +R ++M+Q+ 
Sbjct: 193 VYDTAKGMLPDPKN----------VHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSG 242

Query: 235 DPNENGTEKTQPRSRKTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKI 293
                   K               I K EG   FFKG  + +L+  +  A +L++ ++I
Sbjct: 243 -------RKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLR-GMGGAFVLVLYDEI 293
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query318
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=9.3e-55  Score=381.41  Aligned_cols=278  Identities=18%  Similarity=0.273  Sum_probs=235.7

Q ss_pred             ChhhHHHHHHHhHHHHHHHhhhchHHHHHHHHhhccccc---CccCcCcHHHHHHHHHHcCCccccccchhhhhhhhhhh
Q 021007            4 DIESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAH---GQQKYRKLSDVLWEAISNGQVHSLYQGLGTKNLQSFIS   80 (318)
Q Consensus         4 ~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~~~q~~~~~~---~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~   80 (318)
                      +.+.+.++++|+++++++.+++||+|++|+|+|++....   ....|+++++++++++++||+++||||+.+.+++.++.
T Consensus         4 ~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~   83 (297)
T 1okc_A            4 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   83 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHH
Confidence            456788999999999999999999999999999986421   23478999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhccCCCC---CChHHHHHHHHHHHHHHHhhhccHHHHHHhHhccCC---------CCchhHHHH
Q 021007           81 QFVYFYGYSYFKRLYLKRSGNKS---IGTKANLIIAATAGACTAIITQPLDTASSRMQTSAF---------GKSKGLWKT  148 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~ag~~~~~v~~Pld~ik~r~q~~~~---------~~~~~~~~~  148 (318)
                      .+++|.+||.+++.+....+...   .+....+++|+++|+++.++++|+|++|+|+|++..         +..++++++
T Consensus        84 ~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i  163 (297)
T 1okc_A           84 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKI  163 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHH
Confidence            99999999999996543222111   124568899999999999999999999999998742         122677889


Q ss_pred             HHhcchhhcccccchhhhc-chhhhHHHHHHHHHHHHHHccccCCCCCCCCCcccHHHHHHHHHHHHHhHHHhcchhHHH
Q 021007          149 LTEGTWSDAFDGLGISLLL-TSNPAIQYTVFDQLKRRMLKGKQNKAGGTSPQALSAFAAFVLGAVSKSIATVLTYPAIRC  227 (318)
Q Consensus       149 ~~~~G~~~ly~G~~~~~~~-~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~t~P~dvv  227 (318)
                      +++||+++||+|+.++++| +++.+++|.+||.+++.+.+..          ..+....+++|.++|++++++++|+|||
T Consensus       164 ~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~----------~~~~~~~~~~g~~ag~~a~~~t~P~dvv  233 (297)
T 1okc_A          164 FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK----------NVHIIVSWMIAQTVTAVAGLVSYPFDTV  233 (297)
T ss_dssp             HHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG----------CSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCC----------CccHHHHHHHHHHHHHHHHHhcChHHHH
Confidence            9999999999999999999 8999999999999999654321          1356778999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHhhCcccccccchhhhhhHhhhhHHHHHHHHHHHHHH
Q 021007          228 KVMIQAADPNENGTEKTQPRSRKTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKIAATT  297 (318)
Q Consensus       228 ~~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~~~~~~~~i~~~~ye~~~~~~  297 (318)
                      |+|||.+....     .....|.++++|+++|+++||++|||||+.|+++|. +..+++|.+||.+|+++
T Consensus       234 ktr~q~~~~~~-----~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~-~~~~~~f~~ye~~k~~l  297 (297)
T 1okc_A          234 RRRMMMQSGRK-----GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRG-MGGAFVLVLYDEIKKFV  297 (297)
T ss_dssp             HHHHHTTTTCC-----GGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHH-HHHHHHHHHHHTC----
T ss_pred             HHHHhhcCCCC-----CCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhh-ccceeeehHHHHHHhhC
Confidence            99999986432     123469999999999999999999999999999996 57899999999998764
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 318
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-21
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-06
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score = 90.2 bits (222), Expect = 2e-21
 Identities = 47/287 (16%), Positives = 102/287 (35%), Gaps = 12/287 (4%)

Query: 13  SGAIGSLLSTTILYPLDTCKTKYQAE---VRAHGQQKYRKLSDVLWEAISNGQVHSLYQG 69
           +G + + +S T + P++  K   Q +    +   +++Y+ + D +          S ++G
Sbjct: 12  AGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRG 71

Query: 70  LGTKNLQSFISQFVYFYGYSYFKRLYLKRSGNKSIGTK---ANLIIAATAGACTAIITQP 126
                ++ F +Q + F     +K+++L          +    NL     AGA +     P
Sbjct: 72  NLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYP 131

Query: 127 LDTASSRMQTSAFGKSKGLWKTLTEGTWSDAFDGLGISLLLTSNPAIQYTVFDQLKRRML 186
           LD A +R+       +     T      +  F   G+  L          +         
Sbjct: 132 LDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFG 191

Query: 187 KGKQNKAGGTSPQALSAFAAFVLGAVSKSIATVLTYPAIRCKVMIQAADPNENGTEKTQP 246
                K     P+ +    ++++     ++A +++YP    +  +           K   
Sbjct: 192 VYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM-----QSGRKGAD 246

Query: 247 RSRKTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKI 293
                       I K EG   FFKG  + +L+ +   A +L++ ++I
Sbjct: 247 IMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGM-GGAFVLVLYDEI 292
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query318
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.96
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=100.00  E-value=8.1e-51  Score=353.67  Aligned_cols=274  Identities=18%  Similarity=0.264  Sum_probs=239.5

Q ss_pred             ChhhHHHHHHHhHHHHHHHhhhchHHHHHHHHhhccccc---CccCcCcHHHHHHHHHHcCCccccccchhhhhhhhhhh
Q 021007            4 DIESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAH---GQQKYRKLSDVLWEAISNGQVHSLYQGLGTKNLQSFIS   80 (318)
Q Consensus         4 ~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~~~q~~~~~~---~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~   80 (318)
                      +.+.+.++++|++|++++.+++||||+||+|+|++....   ....++++++++++++++||+++||+|+.+.+++..+.
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~   82 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   82 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcc
Confidence            467788999999999999999999999999999987532   44678999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhccCCCCC---ChHHHHHHHHHHHHHHHhhhccHHHHHHhHhccCCCC---------chhHHHH
Q 021007           81 QFVYFYGYSYFKRLYLKRSGNKSI---GTKANLIIAATAGACTAIITQPLDTASSRMQTSAFGK---------SKGLWKT  148 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~ag~~~~~v~~Pld~ik~r~q~~~~~~---------~~~~~~~  148 (318)
                      ..++|.+|+.+++.+.......+.   .....+.+|.+|++++.++++|+|++|+|+|.+....         .+.++++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~  162 (292)
T d1okca_          83 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKI  162 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHh
Confidence            999999999999998766543322   2456678999999999999999999999999876421         2567888


Q ss_pred             HHhcchhhcccccchhhhc-chhhhHHHHHHHHHHHHHHccccCCCCCCCCCcccHHHHHHHHHHHHHhHHHhcchhHHH
Q 021007          149 LTEGTWSDAFDGLGISLLL-TSNPAIQYTVFDQLKRRMLKGKQNKAGGTSPQALSAFAAFVLGAVSKSIATVLTYPAIRC  227 (318)
Q Consensus       149 ~~~~G~~~ly~G~~~~~~~-~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~t~P~dvv  227 (318)
                      +++||+++||+|+.+.++| +++.+++|..||.+|+.+.+.          ........++++.++++++++++||+|||
T Consensus       163 ~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~----------~~~~~~~~~~~~~~~~~~a~~~t~P~dvv  232 (292)
T d1okca_         163 FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP----------KNVHIIVSWMIAQTVTAVAGLVSYPFDTV  232 (292)
T ss_dssp             HHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG----------GCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccchhhhhccccccccceehHhhhhhhhccchhhhcccc----------cccchHHHHHHHHHHHHHHhhccccHHHH
Confidence            9999999999999999999 899999999999999865433          23456788999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHhhCcccccccchhhhhhHhhhhHHHHHHHHHH
Q 021007          228 KVMIQAADPNENGTEKTQPRSRKTLAGVVCAIWKREGVLGFFKGLHAQILKTVLSSALLLMIKEKI  293 (318)
Q Consensus       228 ~~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~~~~~~~~i~~~~ye~~  293 (318)
                      |+|||.+....     ....+|.++++|++++++|||++|||||+.|+++|.++ ++++|++||++
T Consensus       233 ktR~q~~~~~~-----~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         233 RRRMMMQSGRK-----GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HHHHHTTTTCC-----GGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             HHHHHhcCCCC-----CCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            99999987654     23456999999999999999999999999999999765 68999999964
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure