Citrus Sinensis ID: 021185

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------
Protein Sequence
MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYGQSTNQTSH
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEEEcccHHHHHHHHHHHccccccEEEEEEEccccccccHHHccccEEEEEEcccHHHHHHHHHccHHHHHccEEEEEEccccccccccHHHHHHHHHHHcccccccccccccccccccEEEEcccccccEEEEEccccccccccccccccccEEEEEcccccHHHHHHHHHHHcccccccccccccccccccccccccEEEEEcEEEEEccccccccccccccccccccccHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccEEEEEEEcHHHHHHHHHHHHHccccccEEEEEEEcccccccccccccccEEEEEEccccHHHHHHHcccccHcccccEEEEEccccccccccHHHHHHHHHHccccEcccccccccccEEEEEEEEccccEEEEEEEcccccccccccccccccHHHHHHHcHHccHHHHHHHHHHHHHHHHccccccccccHcccccccccEEEEEcHEEEEcccccccccccccccccccccccHccccccHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
mrplwsspsklnnqrppmNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFakrflhpdivAEYNYIFlwdedigvenfnprrylsivkdegleisqpaldpvksevhhpitarrrnsKAHRRMYkykgsgrcddystappcigwvemMAPVFSRAAWRCAWYMIQNDLIHAWGLdiqlgycaqgdrtknvgvvdseyivhlglptlgvttepelntvgqasddleqianpvalapsqsrrydnrpevrrQSYIEMQIFRNRWKhaveddkcwvdpygqstnqtsh
Flexible Loop (DISEMBL)
mrplwsspsklnnqrpPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEIsqpaldpvksevhhpitarrrnskahrrmykykgsgrcddysTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPvalapsqsrrydnrpevrrqsYIEMQIFRNRWKHAVEDDKCWvdpygqstnqtsh
Low Complexity Region (SEG)
MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYGQSTNQTSH
Disordered region (IsUnstruct)
******************NLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLE******************************YKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTE***************************************SYIEMQIFRNRWKHAVEDDKCWVDPY*********
Disordered Region (DISOPRED)
MRP***************NLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLP****************************************PEVRRQSYIEMQIFRNRWKHAVEDDKCWV************
Disordered Region (DISEMBL)
**********LNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKS*****************RMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYG********
Disordered Region (DISPRO)
*****S*PSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTL*************************************RPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYG********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYGQSTNQTSH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
359486223	413	PREDICTED: uncharacterized protein LOC10	0.977	0.748	0.709	1e-132
240255999	389	uncharacterized protein [Arabidopsis tha	0.892	0.724	0.727	1e-126
255575938	370	conserved hypothetical protein [Ricinus	0.889	0.759	0.683	1e-124
356560121	385	PREDICTED: uncharacterized protein LOC10	0.930	0.763	0.680	1e-123
356541848	387	PREDICTED: uncharacterized protein LOC10	0.936	0.764	0.686	1e-122
357445211	406	hypothetical protein MTR_2g005330 [Medic	0.930	0.724	0.656	1e-121
224120054	314	predicted protein [Populus trichocarpa]	0.952	0.958	0.676	1e-119
224129464	299	predicted protein [Populus trichocarpa]	0.905	0.956	0.679	1e-118
359476620	466	PREDICTED: uncharacterized protein LOC10	0.990	0.671	0.644	1e-118
449462816	414	PREDICTED: uncharacterized protein LOC10	0.965	0.736	0.632	1e-118

>gi|359486223|ref|XP_002265374.2| PREDICTED: uncharacterized protein LOC100255698 [Vitis vinifera] gi|297739491|emb|CBI29673.3| unnamed protein product [Vitis vinifera]

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 220/310 (70%), Positives = 256/310 (82%), Gaps = 1/310 (0%)

Query: 1   MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWK 60
           ++PLW +        P  +LLA+A GIKQK+IV+QIV KF   +FVVMLFHYDGVVDEW+
Sbjct: 97  VQPLWGATLNGEKSSPSKSLLAMAVGIKQKEIVNQIVEKFILSNFVVMLFHYDGVVDEWR 156

Query: 61  DLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD 120
           +  W+D AIHV+  NQTKWWFAKRFLHPDIVAEYNYIFLWDED+GVENF+P RY+SIV+D
Sbjct: 157 EFAWSDHAIHVTVVNQTKWWFAKRFLHPDIVAEYNYIFLWDEDLGVENFHPGRYVSIVED 216

Query: 121 EGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMA 180
           EGLEISQPALDP KS VHH ITAR RNS+ HRR YK++GSGRCDD STAPPC+GWVEMMA
Sbjct: 217 EGLEISQPALDPKKSRVHHQITARVRNSRVHRRTYKHRGSGRCDDQSTAPPCVGWVEMMA 276

Query: 181 PVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVT 240
           PVFS+AAWRC W+MIQN+LIHAWG+D+QLGYCAQGDRTKNVGVVDSEY+VHL LPTLGV 
Sbjct: 277 PVFSKAAWRCVWHMIQNELIHAWGVDMQLGYCAQGDRTKNVGVVDSEYVVHLALPTLGVL 336

Query: 241 TEPELNTVGQASDDL-EQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVED 299
            E EL   G     L E++   VALA S+  + DNR  VRRQS+IEMQIFR+RW +AV++
Sbjct: 337 DENELRGEGHDHSSLREKLPKSVALAQSEFHKVDNRSAVRRQSFIEMQIFRSRWANAVKE 396

Query: 300 DKCWVDPYGQ 309
           DKCW+DPY Q
Sbjct: 397 DKCWIDPYAQ 406

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|240255999|ref|NP_193588.5| uncharacterized protein [Arabidopsis thaliana] gi|332658658|gb|AEE84058.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 211/290 (72%), Positives = 240/290 (82%), Gaps = 8/290 (2%)

Query: 18  MNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQT 77
           M+LLA+A GIKQK++V+++++KFP +DF VMLFHYDGVVD+WK   W + AIHVS  NQT
Sbjct: 108 MSLLAMAVGIKQKELVNKVIQKFPPRDFAVMLFHYDGVVDDWKQYPWNNHAIHVSVMNQT 167

Query: 78  KWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEV 137
           KWWFAKRFLHPDIVAEY YIFLWDED+GV +FNP+RYLSIVK+EGLEISQPALD  KSEV
Sbjct: 168 KWWFAKRFLHPDIVAEYEYIFLWDEDLGVGHFNPQRYLSIVKEEGLEISQPALDTSKSEV 227

Query: 138 HHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQN 197
           HHPITARR+ SK HRRMYKYKGSGRCDD+ST PPCIGWVEMMAPVFSRAAWRC+WYMIQN
Sbjct: 228 HHPITARRKKSKVHRRMYKYKGSGRCDDHSTNPPCIGWVEMMAPVFSRAAWRCSWYMIQN 287

Query: 198 DLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQ 257
           DLIHAWGLD QLGYCAQGDR KNVGVVD+EYI+H GLPTLGV        V  AS  L  
Sbjct: 288 DLIHAWGLDTQLGYCAQGDRKKNVGVVDAEYIIHYGLPTLGV--------VETASSALRN 339

Query: 258 IANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPY 307
             +  +    +SR  DNRPEVR +S++EM+ F+ RWK AV DD CWVDPY
Sbjct: 340 ETDSKSTESLESREVDNRPEVRMKSFVEMKRFKERWKKAVRDDTCWVDPY 389

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575938|ref|XP_002528866.1| conserved hypothetical protein [Ricinus communis] gi|223531717|gb|EEF33540.1| conserved hypothetical protein [Ricinus communis]

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 216/316 (68%), Positives = 247/316 (78%), Gaps = 35/316 (11%)

Query: 1   MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWK 60
           MRPLW+S  + N Q+   +LLA+A GI QK +VDQIV+KFP  DFVVMLFHYDGVVD+W+
Sbjct: 90  MRPLWNSSLEDNKQKLSKSLLALAVGINQKVVVDQIVKKFPLSDFVVMLFHYDGVVDKWR 149

Query: 61  DLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD 120
           DL W+D AIHVSA NQTKWWFAKRFLHPDIV+EY+Y+FLWDED+GVENFNP+RYLSI++D
Sbjct: 150 DLPWSDHAIHVSAVNQTKWWFAKRFLHPDIVSEYDYLFLWDEDLGVENFNPKRYLSIIRD 209

Query: 121 EGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMA 180
           EGLEISQPALDP KS V+HPITAR+  S  HRR+YK+KGSGRC   ST+PPCIGWVEMMA
Sbjct: 210 EGLEISQPALDPTKSAVYHPITARQPKSTVHRRIYKFKGSGRCYGNSTSPPCIGWVEMMA 269

Query: 181 PVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVT 240
           PVFS AAWRCAW+MIQNDLIHAWGLD QLGYCAQGDRTKNVGVVDSEYIVHLGL TLGV 
Sbjct: 270 PVFSTAAWRCAWHMIQNDLIHAWGLDFQLGYCAQGDRTKNVGVVDSEYIVHLGLLTLGVF 329

Query: 241 TEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDD 300
                                            N  EVR+QS +EMQIF +RWK+A ++D
Sbjct: 330 ---------------------------------NGTEVRKQSSVEMQIFLDRWKNAAKED 356

Query: 301 KCWVDPYGQSTNQTSH 316
           KCWVDP+ Q  NQTS+
Sbjct: 357 KCWVDPFQQ--NQTSN 370

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560121|ref|XP_003548344.1| PREDICTED: uncharacterized protein LOC100797710 [Glycine max]

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 215/316 (68%), Positives = 243/316 (76%), Gaps = 22/316 (6%)

Query: 1   MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWK 60
           MRPLW S       + P+NLLA+A G++QK+IV++IV KF S DFVVMLFHYDG VD WK
Sbjct: 92  MRPLWDSGKDNGILKRPLNLLAMAVGLEQKEIVNKIVEKFLSSDFVVMLFHYDGFVDGWK 151

Query: 61  DLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD 120
            L W+ RAIHVSA NQTKWWFAKRFLHPDIV EYNYIFLWDED+ V+NF+P+RYLSIVK+
Sbjct: 152 SLAWSSRAIHVSAINQTKWWFAKRFLHPDIVVEYNYIFLWDEDLLVDNFDPKRYLSIVKE 211

Query: 121 EGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMA 180
           EGLEISQPALDP KSEVHHP+T  +  SK HRR YK KGSGRCDD STAPPCIGWVEMMA
Sbjct: 212 EGLEISQPALDPTKSEVHHPLTVHKAGSKVHRRYYKLKGSGRCDDKSTAPPCIGWVEMMA 271

Query: 181 PVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVT 240
           PVFS+ +W+C W++IQNDLIHAWGLD QLGYCAQGDR +NVGVVDSEYIVHLGLPTLG +
Sbjct: 272 PVFSKKSWQCVWHLIQNDLIHAWGLDRQLGYCAQGDRMQNVGVVDSEYIVHLGLPTLGGS 331

Query: 241 TEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDD 300
              E                    APS S   DNR +VR QSYIEMQ+F  RWK A E D
Sbjct: 332 NGNE--------------------APSGSSG-DNRAKVRMQSYIEMQVFGKRWKDAAEKD 370

Query: 301 KCWVDPYGQSTNQTSH 316
           KCW+DPY +  N+T H
Sbjct: 371 KCWIDPY-EKANKTGH 385

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541848|ref|XP_003539384.1| PREDICTED: uncharacterized protein LOC100526994 [Glycine max]

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 217/316 (68%), Positives = 245/316 (77%), Gaps = 20/316 (6%)

Query: 1   MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWK 60
           MRPLW S       + P+NLLA+A G+KQK+IV++IV KF S  FVVMLFHYDG VD WK
Sbjct: 92  MRPLWDSGKDNRILKRPLNLLAMAVGLKQKEIVNKIVEKFLSSGFVVMLFHYDGFVDGWK 151

Query: 61  DLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD 120
            L W+  AIHVSA NQTKWWFAKRFLHPDIVAEYNYIFLWDED+ V+NF+P+RYLSIVK+
Sbjct: 152 SLAWSSCAIHVSAINQTKWWFAKRFLHPDIVAEYNYIFLWDEDLLVDNFDPKRYLSIVKE 211

Query: 121 EGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMA 180
           EGLEISQPALDP KSEVHHP+T  +  SK HRR YK KGSGRCDD STAPPCIGWVEMMA
Sbjct: 212 EGLEISQPALDPTKSEVHHPLTVHKAVSKVHRRYYKLKGSGRCDDKSTAPPCIGWVEMMA 271

Query: 181 PVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVT 240
           PVFS+ +W+C W++IQNDLIHAWGLD QLGYCAQGDR +NVGVVDSEYIVHLGLPTLG +
Sbjct: 272 PVFSKKSWQCVWHLIQNDLIHAWGLDRQLGYCAQGDRMRNVGVVDSEYIVHLGLPTLGGS 331

Query: 241 TEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDD 300
              E+                   APS S   DNR +VR QSYIEMQ+F  RWK A E D
Sbjct: 332 NGNEVQ------------------APSDSPG-DNRAKVRMQSYIEMQVFGKRWKDAAEKD 372

Query: 301 KCWVDPYGQSTNQTSH 316
           KCW+DPY Q+ N+TSH
Sbjct: 373 KCWIDPYEQA-NKTSH 387

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445211|ref|XP_003592883.1| hypothetical protein MTR_2g005330 [Medicago truncatula] gi|355481931|gb|AES63134.1| hypothetical protein MTR_2g005330 [Medicago truncatula]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/332 (65%), Positives = 252/332 (75%), Gaps = 38/332 (11%)

Query: 2   RPLWSSPSKLNNQ--RPPMNLLAIAAGIKQKKIVDQIVRKF-------------PSKDFV 46
           RPLW   S +NN+    P+NLLAI+ G+KQK++VD+IV+KF             PS DFV
Sbjct: 96  RPLWDD-SAVNNRISNHPLNLLAISVGVKQKEVVDKIVKKFKLISADLYRWWQFPSSDFV 154

Query: 47  VMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGV 106
           VMLFHYDG VD WK+L W++RAIHVSA NQTKWWFAKRFLHPDIVA+YNYIFLWDED+ V
Sbjct: 155 VMLFHYDGFVDGWKNLAWSNRAIHVSAINQTKWWFAKRFLHPDIVADYNYIFLWDEDLLV 214

Query: 107 ENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDY 166
           +NF+P+RYLSIVK+EGLEISQPALDP KSE+HHP+T  +  SK HRR YK+KGSGRCDD 
Sbjct: 215 DNFDPKRYLSIVKEEGLEISQPALDPGKSEIHHPLTVHKAGSKVHRRYYKFKGSGRCDDN 274

Query: 167 STAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDS 226
           STAPPC+GWVEMMAPVFS+ +W+C W+MIQNDLIHAWGLD QLGYCAQGDR KNVGVVDS
Sbjct: 275 STAPPCLGWVEMMAPVFSKKSWQCVWHMIQNDLIHAWGLDRQLGYCAQGDRMKNVGVVDS 334

Query: 227 EYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALAPSQSRRYD-NRPEVRRQSYIE 285
           EYIVHLGLPTLG +   E                      S S R D +RP+VR QSYIE
Sbjct: 335 EYIVHLGLPTLGGSNGNE--------------------GSSNSHRDDSDRPKVRMQSYIE 374

Query: 286 MQIFRNRWKHAVEDDKCWVDPY-GQSTNQTSH 316
           MQ+F  RWK A + D+CW+DPY  Q  NQTSH
Sbjct: 375 MQVFGKRWKDAAKKDQCWIDPYEQQQANQTSH 406

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120054|ref|XP_002331125.1| predicted protein [Populus trichocarpa] gi|222872853|gb|EEF09984.1| predicted protein [Populus trichocarpa]

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/306 (67%), Positives = 241/306 (78%), Gaps = 5/306 (1%)

Query: 1   MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWK 60
           M+PLW S    +N +P  +LLAIA GIKQK+IVD+IV KFP  DFVVMLFHYDGVVD+W+
Sbjct: 14  MQPLWGSSLNDDNPQPSASLLAIAVGIKQKEIVDRIVTKFPLSDFVVMLFHYDGVVDKWR 73

Query: 61  DLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD 120
           DL W+D AIHVSA NQTKWWFAKRFLHPDIVAEYNYIFLWDED+GVENFNPRRYLSIVK+
Sbjct: 74  DLSWSDSAIHVSAVNQTKWWFAKRFLHPDIVAEYNYIFLWDEDLGVENFNPRRYLSIVKE 133

Query: 121 EGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMA 180
           EGLE+SQPALDP +S +H+PIT+R RNS+AHR++ K KG+GRC + ST PPC GWVEMMA
Sbjct: 134 EGLEVSQPALDPARSTIHNPITSRTRNSRAHRKILKLKGNGRCYNNSTLPPCTGWVEMMA 193

Query: 181 PVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVT 240
           PVFS+AAWRC WYMIQNDLIHAWGLD +LG+CAQGD TKNVGVVD+EY+VHLGL TLGV 
Sbjct: 194 PVFSKAAWRCTWYMIQNDLIHAWGLDRKLGHCAQGDWTKNVGVVDAEYVVHLGLSTLGVF 253

Query: 241 TEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDD 300
              E +      D +      V +       +     VR QSY+EM IF  RW+ AV +D
Sbjct: 254 NGSEASISYIPYDSI-----IVGVRCYNCSFFLLVLFVRTQSYVEMNIFHKRWEDAVNED 308

Query: 301 KCWVDP 306
           +CWVDP
Sbjct: 309 RCWVDP 314

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129464|ref|XP_002328723.1| predicted protein [Populus trichocarpa] gi|222839021|gb|EEE77372.1| predicted protein [Populus trichocarpa]

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/306 (67%), Positives = 238/306 (77%), Gaps = 20/306 (6%)

Query: 1   MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWK 60
           MRPLW S  K +N  P M+LLAIA GIKQK IV+QIV KFP  DFVVMLFHYDGVVDEW+
Sbjct: 14  MRPLWGSSLKNDNPPPSMSLLAIAVGIKQKAIVNQIVEKFPLSDFVVMLFHYDGVVDEWR 73

Query: 61  DLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD 120
           DL W++ AIHVSA NQTKWWFAKRFLHPDIV+EYNYIFLWDED+GVENFNPRRYLSIVKD
Sbjct: 74  DLSWSNSAIHVSAVNQTKWWFAKRFLHPDIVSEYNYIFLWDEDLGVENFNPRRYLSIVKD 133

Query: 121 EGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMA 180
           EGLE+SQPALDP +S VHH ITAR RNS  HR++ K++G+ +C   ST+PPC GWVEMMA
Sbjct: 134 EGLEVSQPALDPSRSTVHHQITARIRNSIVHRKILKFRGNTKCYGNSTSPPCTGWVEMMA 193

Query: 181 PVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVT 240
           PVFS+AAW+C WYMIQNDLIHAWGLD +LGYCAQGD TKNVGVVD+EYIVHLGL TLGV 
Sbjct: 194 PVFSKAAWQCTWYMIQNDLIHAWGLDRKLGYCAQGDWTKNVGVVDAEYIVHLGLSTLGVF 253

Query: 241 TEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDD 300
              E +               ++  P     YD    VR QS +EM IF  RW+ A+++D
Sbjct: 254 NGSEAS---------------ISYVP-----YDRIIVVRTQSSVEMNIFHERWEAAIKED 293

Query: 301 KCWVDP 306
           +CWVDP
Sbjct: 294 RCWVDP 299

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359476620|ref|XP_002272495.2| PREDICTED: uncharacterized protein LOC100244499 [Vitis vinifera]

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/326 (64%), Positives = 245/326 (75%), Gaps = 13/326 (3%)

Query: 1   MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWK 60
           MRPLW  P K  + +   NLLA+A G+KQK +V+++V KF S  FVVMLFHYDGVVDEWK
Sbjct: 144 MRPLWGFPKKRKDLK--RNLLAVAVGVKQKDLVNKMVEKFLSYGFVVMLFHYDGVVDEWK 201

Query: 61  DLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD 120
           D  W DR +HV+A NQTKWWFAKRFLHP+IVAEYNYIFLWDED+GV +FNPRRY++ V+ 
Sbjct: 202 DFKWCDRVLHVAAINQTKWWFAKRFLHPEIVAEYNYIFLWDEDLGVTDFNPRRYVATVQR 261

Query: 121 EGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGR-CDDYSTAPPCIGWVEMM 179
           EGLEISQPALD  KSEVHH IT R R S  HRR++K  GSG+ CD+ STAPPC GW+E+M
Sbjct: 262 EGLEISQPALDGSKSEVHHQITLRGRRSDVHRRIFKSSGSGKICDENSTAPPCTGWIEVM 321

Query: 180 APVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGV 239
           APVFSR AWRC WYMIQNDLIHAWGLD+QLGYCAQGDRTKNVGVVDS+YIVH GLPTLG 
Sbjct: 322 APVFSREAWRCVWYMIQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDSDYIVHYGLPTLG- 380

Query: 240 TTEPELNTVGQASDDLE--------QIANPVALAPSQSRRYDN-RPEVRRQSYIEMQIFR 290
             +P+  T     DD E            P++  P+ S    N R EVRRQSYIE  IF+
Sbjct: 381 ANDPDKTTPPVQDDDSEPEKITTTTTAETPISKLPASSTSPINFRVEVRRQSYIEYNIFK 440

Query: 291 NRWKHAVEDDKCWVDPYGQSTNQTSH 316
            RW+ AV++DKCW DPY Q   + +H
Sbjct: 441 KRWRQAVKEDKCWKDPYQQFGEKNTH 466

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462816|ref|XP_004149136.1| PREDICTED: uncharacterized protein LOC101205845 [Cucumis sativus]

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 205/324 (63%), Positives = 246/324 (75%), Gaps = 19/324 (5%)

Query: 1   MRPLWSSPSKLNNQRPPM--NLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDE 58
            +PLW S   L N++P +  NLLAIA GIKQ+ +V +I+ KFP  DF V+LFHYDGVVDE
Sbjct: 24  FQPLWGS--SLQNKKPKVSKNLLAIAVGIKQRHVVSKIIEKFPQDDFDVILFHYDGVVDE 81

Query: 59  WKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIV 118
           W++  W  RA+HVSA NQTKWWFAKRFLHPDIVAEYNYIFLWDED+GV+ F+P+RY+SI+
Sbjct: 82  WREFAWYSRALHVSALNQTKWWFAKRFLHPDIVAEYNYIFLWDEDLGVDYFDPKRYISIL 141

Query: 119 KDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEM 178
           K+EGLEISQPALDPVKS+VH P+TAR+  SK HRR Y +KG+GRC   ST PPC GWVEM
Sbjct: 142 KEEGLEISQPALDPVKSKVHQPLTARKTGSKVHRRFYNFKGAGRCYANSTGPPCTGWVEM 201

Query: 179 MAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLG 238
           MAPVFSRA WRC WYMIQNDLIHAWGLD QLGYCAQGDRTK VGVVD+EYIVHLGLPTLG
Sbjct: 202 MAPVFSRAGWRCTWYMIQNDLIHAWGLDRQLGYCAQGDRTKKVGVVDAEYIVHLGLPTLG 261

Query: 239 VTTEPELNTVGQASDDL---------EQIANPVALAPSQSR------RYDNRPEVRRQSY 283
            + +  L+   + S            EQ+ +  AL    S       + +NR +VR QS 
Sbjct: 262 ASHDNALSFSIKLSSVYYGTKLTFPSEQLNSDAALKKDSSNLDRSEPQVNNRVKVRMQSS 321

Query: 284 IEMQIFRNRWKHAVEDDKCWVDPY 307
           +EMQIF++RW  A ++D+CW+DPY
Sbjct: 322 LEMQIFKDRWTDAAKNDRCWIDPY 345

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
TAIR|locus:2124608	389	AT4G18530 "AT4G18530" [Arabido	0.936	0.760	0.701	3.7e-119
TAIR|locus:2202124	438	AT1G11170 [Arabidopsis thalian	0.946	0.682	0.554	1.1e-92
TAIR|locus:2008425	425	AT1G61240 [Arabidopsis thalian	0.958	0.712	0.542	2.7e-91
TAIR|locus:2031905	401	AT1G13000 [Arabidopsis thalian	0.765	0.603	0.506	3.2e-65
TAIR|locus:2086721	398	AT3G27470 "AT3G27470" [Arabido	0.743	0.590	0.5	2.9e-64
TAIR|locus:2205140	382	AT1G08040 [Arabidopsis thalian	0.75	0.620	0.495	4.2e-63
TAIR|locus:504956279	381	AT1G24570 [Arabidopsis thalian	0.734	0.608	0.485	5.4e-63
TAIR|locus:2079291	396	AT3G26440 [Arabidopsis thalian	0.734	0.585	0.5	7.9e-62
TAIR|locus:2057557	374	AT2G28310 "AT2G28310" [Arabido	0.731	0.617	0.487	7.9e-62
TAIR|locus:2008640	404	AT1G67850 "AT1G67850" [Arabido	0.731	0.571	0.495	2.1e-61

TAIR|locus:2124608 AT4G18530 "AT4G18530" [Arabidopsis thaliana (taxid:3702)]

 Score = 1173 (418.0 bits), Expect = 3.7e-119, P = 3.7e-119
 Identities = 214/305 (70%), Positives = 245/305 (80%)

Query:     4 LWS-SPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDL 62
             LW+   +K       M+LLA+A GIKQK++V+++++KFP +DF VMLFHYDGVVD+WK  
Sbjct:    93 LWNYDDTKKRRPNHSMSLLAMAVGIKQKELVNKVIQKFPPRDFAVMLFHYDGVVDDWKQY 152

Query:    63 VWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEG 122
              W + AIHVS  NQTKWWFAKRFLHPDIVAEY YIFLWDED+GV +FNP+RYLSIVK+EG
Sbjct:   153 PWNNHAIHVSVMNQTKWWFAKRFLHPDIVAEYEYIFLWDEDLGVGHFNPQRYLSIVKEEG 212

Query:   123 LEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPV 182
             LEISQPALD  KSEVHHPITARR+ SK HRRMYKYKGSGRCDD+ST PPCIGWVEMMAPV
Sbjct:   213 LEISQPALDTSKSEVHHPITARRKKSKVHRRMYKYKGSGRCDDHSTNPPCIGWVEMMAPV 272

Query:   183 FSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTE 242
             FSRAAWRC+WYMIQNDLIHAWGLD QLGYCAQGDR KNVGVVD+EYI+H GLPTLGV   
Sbjct:   273 FSRAAWRCSWYMIQNDLIHAWGLDTQLGYCAQGDRKKNVGVVDAEYIIHYGLPTLGV--- 329

Query:   243 PELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKC 302
                  V  AS  L    +  +    +SR  DNRPEVR +S++EM+ F+ RWK AV DD C
Sbjct:   330 -----VETASSALRNETDSKSTESLESREVDNRPEVRMKSFVEMKRFKERWKKAVRDDTC 384

Query:   303 WVDPY 307
             WVDPY
Sbjct:   385 WVDPY 389

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2202124 AT1G11170 [Arabidopsis thaliana (taxid:3702)]

 Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
 Identities = 174/314 (55%), Positives = 222/314 (70%)

Query:     1 MRPLWSSPSKLNNQRPPM---NLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVD 57
             ++PLWS  S L ++   M   NLLAI  G+KQK  VD +V+KF   +F ++LFHYDG +D
Sbjct:    98 LKPLWSRGS-LRSKGVEMTNRNLLAIPVGLKQKGNVDALVKKFLPANFTIVLFHYDGNMD 156

Query:    58 EWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSI 117
             +W DL W+ ++IH+ A NQTKWWFAKRFLHPD+V+ Y+YIFLWDED+GVENFNP RYL I
Sbjct:   157 KWWDLEWSSKSIHIVAQNQTKWWFAKRFLHPDVVSIYDYIFLWDEDLGVENFNPERYLKI 216

Query:   118 VKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVE 177
             VK  GLEISQPALD   +E+HH IT R +  K HRR+Y  +G  RC + S+ PPC G+VE
Sbjct:   217 VKSVGLEISQPALDHNSTEIHHKITLRSKTKKFHRRVYINRGHKRCSNTSSDPPCTGFVE 276

Query:   178 MMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTL 237
              MAPVFS+AAW C W +IQNDL+H WG+D++LGYCAQGDRTKNVG+VDSEYI+H G+ TL
Sbjct:   277 GMAPVFSKAAWLCTWNLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIVDSEYILHQGIQTL 336

Query:   238 GVTTEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAV 297
             G +  PE           ++ A  V         +D+R E+RRQS  E+Q F+ RW  AV
Sbjct:   337 GESV-PEK----------KKTARDVGTRRQGHTTFDSRTEIRRQSTWELQTFKERWSKAV 385

Query:   298 EDDKCWVDPYGQST 311
             E+D  W+DP   S+
Sbjct:   386 EEDIKWIDPSSSSS 399

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008425 AT1G61240 [Arabidopsis thaliana (taxid:3702)]

 Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
 Identities = 171/315 (54%), Positives = 217/315 (68%)

Query:     1 MRPLWSSPS--KLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDE 58
             ++PLWSS S    + +    NLLA+  G+KQK  VD +V+KF   +F V+LFHYDG +D+
Sbjct:    95 LKPLWSSSSLRSKSGELTNRNLLAMPVGLKQKDNVDAVVKKFLPANFTVILFHYDGNMDQ 154

Query:    59 WKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIV 118
             W DL W+ +AIH+ A NQTKWWFAKRFLHPDIV+ Y+Y+FLWDED+GVENFNP++YL IV
Sbjct:   155 WWDLEWSSKAIHIVAHNQTKWWFAKRFLHPDIVSIYDYVFLWDEDLGVENFNPQKYLRIV 214

Query:   119 KDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEM 178
             K  GLEISQPAL P  +EVHH IT R R    HRR+Y  +G+ +C + S  PPC G+VE 
Sbjct:   215 KTAGLEISQPALHPNSTEVHHRITVRSRTKIFHRRVYDSRGNMKCSNASEGPPCTGFVEG 274

Query:   179 MAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLG 238
             MAPVFSR+AW C W +IQNDL+H WG+D++LGYCAQGDR+K VG+VDSEYI H G+ TLG
Sbjct:   275 MAPVFSRSAWFCTWNLIQNDLVHGWGMDMKLGYCAQGDRSKKVGIVDSEYIFHQGIQTLG 334

Query:   239 VTTEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVE 298
                       G    D +  A         S  +D+R E+RRQS  E+Q F+ RW  AV 
Sbjct:   335 ----------GSGYPDKKNSARSGVNRRRGSATFDSRTEIRRQSTWELQAFKERWNQAVA 384

Query:   299 DDKCWVDPYGQSTNQ 313
             +DK WV+    S N+
Sbjct:   385 EDKYWVERSSPSRNR 399

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2031905 AT1G13000 [Arabidopsis thaliana (taxid:3702)]

 Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
 Identities = 126/249 (50%), Positives = 166/249 (66%)

Query:     1 MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWK 60
             +R LW  P + +    P  L+A   G  QK  VD  V+KF SKDF ++LFHYDG   EW+
Sbjct:   124 LRRLWGLPEE-DVPVKPKYLIAFTVGFGQKVNVDACVKKF-SKDFTIVLFHYDGRTTEWE 181

Query:    61 DLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD 120
             +L W+ RAIHVS   QTKWW+AKRFLHPDIVA Y+Y+F+WDED+G+ENF+   Y+ ++K 
Sbjct:   182 ELEWSKRAIHVSVPKQTKWWYAKRFLHPDIVAPYDYVFIWDEDLGLENFDVEEYIRLIKK 241

Query:   121 EGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMA 180
              GLEISQPA++  K ++   IT R+   + H+   K K  GRC+D    PPC  ++E+MA
Sbjct:   242 HGLEISQPAVES-KKKITWEITKRKTKGEVHKDA-KEK-PGRCND-PHLPPCAAFIEIMA 297

Query:   181 PVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVT 240
             PVFSR AWRC W+MIQNDL+H WGLD  L  C +    K +GVVDS++I+H  LP+LG  
Sbjct:   298 PVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEK-IGVVDSQWIIHQSLPSLGSQ 356

Query:   241 TEPELNTVG 249
              E +    G
Sbjct:   357 GEAQDGKAG 365

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2086721 AT3G27470 "AT3G27470" [Arabidopsis thaliana (taxid:3702)]

 Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
 Identities = 123/246 (50%), Positives = 169/246 (68%)

Query:     1 MRPLWSSPSK-LN-NQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDE 58
             +R LW  P++ L   QR    L+    G  Q+K +D +++KF S +F +MLFHYDG   E
Sbjct:   116 LRRLWGDPNEDLTVKQR---YLVTFTVGYDQRKNIDTVLKKF-SDNFSIMLFHYDGRASE 171

Query:    59 WKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIV 118
             W++  W+ RAIHVS   QTKWW+AKRFLHPDIVA Y YIF+WDED+GVE+F+  +YL++V
Sbjct:   172 WEEFEWSKRAIHVSIRKQTKWWYAKRFLHPDIVAPYEYIFIWDEDLGVEHFDSEKYLAVV 231

Query:   119 KDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEM 178
             K  GLEISQP L+P +  +   +T +R +++ H+  +  + +G C D    PPC  +VE+
Sbjct:   232 KKHGLEISQPGLEPYEG-LTWEMTKKRDDTEVHK--HAEERNGWCTD-PNLPPCAAFVEI 287

Query:   179 MAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLG 238
             MAPVFSR AWRC W+MIQNDLIH WGLD  +  C Q    K +GVVD+++I+H G+P+LG
Sbjct:   288 MAPVFSRKAWRCVWHMIQNDLIHGWGLDFAVRKCVQNAHEK-IGVVDAQWIIHQGVPSLG 346

Query:   239 VTTEPE 244
                +PE
Sbjct:   347 NQGQPE 352

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2205140 AT1G08040 [Arabidopsis thaliana (taxid:3702)]

 Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
 Identities = 121/244 (49%), Positives = 162/244 (66%)

Query:     1 MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWK 60
             +R LW  PS+ + ++ P  L+    G +Q+  ++  V+KF S+DF ++LFHYDG   EW 
Sbjct:   107 LRRLWGEPSE-DLKKKPKYLVTFTVGFEQRNNINAAVKKF-SEDFQILLFHYDGRTTEWD 164

Query:    61 DLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD 120
                W+  AIH+SA  QTKWW+AKRFLHPD+V+ Y YIF+WDED+GVE+FN  RY+ +VK 
Sbjct:   165 QFEWSKNAIHISAKKQTKWWYAKRFLHPDVVSAYEYIFIWDEDLGVEHFNADRYVELVKK 224

Query:   121 EGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMA 180
              GLEISQP L+P  + +   +T RR +   H+   K K  G C D    PPC  +VE+MA
Sbjct:   225 HGLEISQPGLEP-NNGLTWEMTKRRGDRDVHKET-KEK-PGWCSD-PHLPPCAAFVEIMA 280

Query:   181 PVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVT 240
             PVFSR AWRC W+MIQNDL+H WGLD  L  C +    K +GVVDS++I+H  +P+LG  
Sbjct:   281 PVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEK-IGVVDSQWIIHQVIPSLGSQ 339

Query:   241 TEPE 244
              E E
Sbjct:   340 GESE 343

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:504956279 AT1G24570 [Arabidopsis thaliana (taxid:3702)]

 Score = 621 (223.7 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
 Identities = 116/239 (48%), Positives = 156/239 (65%)

Query:     1 MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWK 60
             +R LW +P + +  + P  L     G  Q+  +D  V KF S++F ++LFHYDGV   W 
Sbjct:    96 LRRLWGNPDE-DLVKQPRYLATFTVGYNQRHNIDACVSKF-SENFTIVLFHYDGVTSAWN 153

Query:    61 D-LVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVK 119
             D   W+  AIH+S   QTKWW+AKRFLHPDIVA Y+YIF+WDED+GV++FN   Y+ IVK
Sbjct:   154 DEFEWSRNAIHISVKKQTKWWYAKRFLHPDIVARYDYIFIWDEDLGVDHFNAEEYIHIVK 213

Query:   120 DEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMM 179
                LEISQP LDP ++  +  IT RR +S+ H+   +      C +    PPC  +VE+M
Sbjct:   214 KHDLEISQPGLDP-ETGFNWQITKRREHSEVHKETDEKLDW--CSN-PPRPPCAAFVEIM 269

Query:   180 APVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLG 238
             APVFSR AWRC W+MIQNDL+H WGLD  L  C +    + +G+VDS++IVH  +P+LG
Sbjct:   270 APVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCVEEPAFEKIGIVDSQWIVHQFIPSLG 328

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2079291 AT3G26440 [Arabidopsis thaliana (taxid:3702)]

 Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
 Identities = 119/238 (50%), Positives = 157/238 (65%)

Query:     1 MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWK 60
             +R LW  P        P  L+A     +Q+K +D  V+KF S +F ++LFHYDG   E+ 
Sbjct:   114 LRRLWGLPKDDLPVVKPKYLVAFTVSYEQRKNIDACVKKF-SDNFTIVLFHYDGKTSEYD 172

Query:    61 DLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD 120
             +  W+ RAIHVS   QTKWW+AKRFLHPDI+A Y YIF+WDED+GVENF+   Y+ IV  
Sbjct:   173 EFEWSKRAIHVSVPKQTKWWYAKRFLHPDIIAPYEYIFIWDEDLGVENFDAEEYIKIVNK 232

Query:   121 EGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMA 180
              GLEISQPA++  KS +   IT R    + H+ + +  G  RC+D    PPC G++E+MA
Sbjct:   233 HGLEISQPAVESRKS-ITWKITKRIPGIEVHKEVEEKPG--RCND-PHLPPCAGFIEIMA 288

Query:   181 PVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLG 238
             PVFSR AWRC W+MIQNDL+H WGLD  L  C +    K +GVVDS++I+H  +P+LG
Sbjct:   289 PVFSREAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEK-IGVVDSQWIIHQKIPSLG 345

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2057557 AT2G28310 "AT2G28310" [Arabidopsis thaliana (taxid:3702)]

 Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
 Identities = 116/238 (48%), Positives = 161/238 (67%)

Query:     1 MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWK 60
             +R LW  P++ + ++ P  L+    G +Q+  ++ +V+KF S+DF ++LFHYDG   EW 
Sbjct:   100 LRRLWGEPNE-DLKKKPKYLVTFTVGFEQRNHINGVVKKF-SEDFQILLFHYDGRTTEWD 157

Query:    61 DLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD 120
                W+  AIH+S   QTKWW+AKRFLHPD+V+ Y YIF+WDED+GVE+FN  +Y+ +VK 
Sbjct:   158 QFEWSKSAIHISTRKQTKWWYAKRFLHPDVVSAYEYIFIWDEDLGVEHFNADKYIELVKK 217

Query:   121 EGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMA 180
              GLEISQP L+P  + +   +T RR + + H+   K K  G C D    PPC  +VE+MA
Sbjct:   218 HGLEISQPGLEP-NNGLTWEMTKRRGDREVHKDT-KEK-PGWCKD-PHLPPCAAFVEIMA 273

Query:   181 PVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLG 238
             PVFSR AWRC W+MIQNDL+H WGLD  L  C +    K +GVVDS++I+H  +P+LG
Sbjct:   274 PVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEK-IGVVDSQWIIHKVIPSLG 330

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008640 AT1G67850 "AT1G67850" [Arabidopsis thaliana (taxid:3702)]

 Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
 Identities = 118/238 (49%), Positives = 157/238 (65%)

Query:     1 MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWK 60
             +R LW  P + + +  P  L     GI QK  +D  V+KF S++F ++LFHYDG V EW 
Sbjct:   120 LRRLWGLPHE-DLKSEPRYLATFTVGINQKANIDACVKKF-SENFTIVLFHYDGRVTEWD 177

Query:    61 DLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD 120
             +  W+  AIH+S   QTKWW+AKRFLHPDIVA Y+YIF+WDED+GVE+FN   Y+ +VK 
Sbjct:   178 EFEWSKTAIHISVRKQTKWWYAKRFLHPDIVARYDYIFVWDEDLGVEHFNAEEYVKMVKK 237

Query:   121 EGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMA 180
              GLEISQP L+P +  +   +T RR + + H+     +  G C D    PPC  +VE+MA
Sbjct:   238 HGLEISQPGLEPNQG-LTWQMTKRRGDMEVHK--ITEERPGWCSD-PHLPPCAAFVEIMA 293

Query:   181 PVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLG 238
             PVFSR AWRC W++IQNDL+H WGLD  L  C +    K +GVVDS+++VH   P+LG
Sbjct:   294 PVFSRNAWRCVWHVIQNDLVHGWGLDFALRRCVEPAHEK-IGVVDSQWVVHQSFPSLG 350


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.439    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      316       316   0.00082  116 3  11 22  0.38    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  629 (67 KB)
  Total size of DFA:  269 KB (2140 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.79u 0.12s 23.91t   Elapsed:  00:00:01
  Total cpu time:  23.79u 0.12s 23.91t   Elapsed:  00:00:01
  Start:  Sat May 11 05:37:49 2013   End:  Sat May 11 05:37:50 2013

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00035311001 SubName- Full=Chromosome undetermined scaffold_77, whole genome shotgun sequence; (411 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	316
pfam05212	294	pfam05212, DUF707, Protein of unknown function (DU	1e-131
COG5096	757	COG5096, COG5096, Vesicle coat complex, various su	0.002

>gnl|CDD|218501 pfam05212, DUF707, Protein of unknown function (DUF707)

 Score =  374 bits (961), Expect = e-131
 Identities = 136/300 (45%), Positives = 173/300 (57%), Gaps = 31/300 (10%)

Query: 1   MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWK 60
           +R LW SP + +    P  LLA   G  QK  VD  V+KF S +F ++LFHYDG   EW 
Sbjct: 26  LRRLWGSPEE-DVASKPKYLLAFTVGYSQKANVDACVKKF-SDNFTIVLFHYDGRTTEWD 83

Query: 61  DLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD 120
           +L W+ +AIHVSA  QTKWWFAKRFLHPDIVA Y YIFLWDED+GV+NF+   Y+ IVK 
Sbjct: 84  ELEWSKKAIHVSAKKQTKWWFAKRFLHPDIVAPYEYIFLWDEDLGVDNFDAEEYIKIVKK 143

Query: 121 EGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMA 180
            GLEISQP LDP + ++   IT RR + + H+   +          ST PPC G+VE+MA
Sbjct: 144 HGLEISQPGLDPDRGQITWRITKRRGDGEVHKDTREKGRCCD---NSTGPPCTGFVEIMA 200

Query: 181 PVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVT 240
           PVFSR AWRC W+MIQNDL+H WGLD  L  C      + +GVVDS+++VH G+P+LG  
Sbjct: 201 PVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCV-EPAHEKIGVVDSQWVVHQGIPSLGSQ 259

Query: 241 TEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDD 300
              E                                 VR +   E  +F+ RW  A ++ 
Sbjct: 260 GTAE-------------------------NGKAPWQGVRDRCKAEWTMFQRRWAAAEKEY 294

This family consists of several uncharacterized proteins from Arabidopsis thaliana. Length = 294

>gnl|CDD|227427 COG5096, COG5096, Vesicle coat complex, various subunits [Intracellular trafficking and secretion]

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 35/182 (19%), Positives = 62/182 (34%), Gaps = 25/182 (13%)

Query: 113 RYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSK-AHRRMYKYKGSGRCDDYSTAPP 171
           R LS+++ +  E+    +DP+K  +  P    R+ +  A  ++Y+       D Y     
Sbjct: 114 RTLSLLRVK--ELLGNIIDPIKKLLTDPHAYVRKTAALAVAKLYRLDK----DLYHELGL 167

Query: 172 CIGWVEMMA---PVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEY 228
                E++A   P+    A   +   I  +L H + L++ L       R   + ++    
Sbjct: 168 IDILKELVADSDPIVIANALA-SLAEIDPELAHGYSLEVIL-------RIPQLDLLSLSV 219

Query: 229 IVHLGLPT-LGVTTEPELNTVGQASDDLE------QIANPVALAPSQSRRYDNRPEVRRQ 281
                L   L V TE    T   A D  E      Q  N   L  +          +   
Sbjct: 220 STEWLLLIILEVLTERVPTTPDSAEDFEERLSPPLQHNNAEVLLIAVKVILRLLVFLPSN 279

Query: 282 SY 283
           + 
Sbjct: 280 NL 281

Length = 757

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	316
PF05212	294	DUF707: Protein of unknown function (DUF707); Inte	100.0
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	95.24
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	94.62
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	94.49
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	92.42
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	90.27
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	89.69
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	88.22
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	88.02
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	85.5
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	84.28
COG1216	305	Predicted glycosyltransferases [General function p	83.81
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	81.3
cd06442	224	DPM1_like DPM1_like represents putative enzymes si	81.01

>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana

Probab=100.00  E-value=6.1e-122  Score=865.89  Aligned_cols=268  Identities=65%  Similarity=1.195  Sum_probs=256.9

Q ss_pred             CCCCCCCCCCCCCCCCCCcEEEEEecccchhhHHHHHhhCCCCCcEEEEEEecCcccccccccccCceeEEEeecccchh
Q 021185            1 MRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWW   80 (316)
Q Consensus         1 ~r~Lwg~~~~~~~~~~~k~Ll~~~VG~kqk~~vd~~v~kf~~~nF~v~LfhYDg~vd~w~d~ews~~aiHv~a~kqtKWw   80 (316)
                      ||||||+|+++. ..++|||||||||+|||++||++|+|| ++|||||||||||+||+|++||||++||||++.||||||
T Consensus        26 ~r~lw~~p~~~~-~~~~k~Lla~~VG~kqk~~vd~~v~Kf-~~nF~i~LfhYDg~vd~w~~~~ws~~aiHv~~~kqtKww  103 (294)
T PF05212_consen   26 LRPLWGNPSEDL-PKKPKYLLAMTVGIKQKDNVDAIVKKF-SDNFDIMLFHYDGRVDEWDDFEWSDRAIHVSARKQTKWW  103 (294)
T ss_pred             eeecCCCccccc-cCCCceEEEEEecHHHHhhhhHHHhhh-ccCceEEEEEecCCcCchhhcccccceEEEEeccceEEe
Confidence            799999999985 567899999999999999999999999 899999999999999999999999999999999999999


Q ss_pred             hhccccCccccccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCcCCCCCccccccceeccCcccceeeecccCC
Q 021185           81 FAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGS  160 (316)
Q Consensus        81 ~akRfLHPdiv~~YDYIflwDDDL~vd~f~i~ry~~ivr~~gLeISQPALd~~s~~~sh~iT~r~~~~~vHr~~~~~~~~  160 (316)
                      |||||||||||++|||||||||||+||+|+|+|||+||++||||||||||+++||++||+||+|++.++|||.   .++.
T Consensus       104 ~akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~~~~~~iT~R~~~~~vhr~---~~~~  180 (294)
T PF05212_consen  104 FAKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSSEIHHPITKRRPDSEVHRK---TRGG  180 (294)
T ss_pred             ehhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCceeeeeEEeecCCceeEec---cCCC
Confidence            9999999999999999999999999999999999999999999999999999998999999999999999983   5777


Q ss_pred             CCCCCCCCCCCccceEEEecccccHHHHHHHhhhhcCCCcccchhhHHhhhhhcCCCCCcEEEEeeceEEEccCCCCCCC
Q 021185          161 GRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVT  240 (316)
Q Consensus       161 ~~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~~ptlg~~  240 (316)
                      +.|.+++++||||||||||||||||+|||||||||||||+|||||||+|+||+ +++++||||||||||+|+|+|||||+
T Consensus       181 ~~~~~~~~~ppct~fVEiMAPVFSr~Awrcvw~miqNDLvhGWGLDf~~~~c~-~~~~~kiGVVDs~~VvH~gvptLG~~  259 (294)
T PF05212_consen  181 PRCCDDSTGPPCTGFVEIMAPVFSRAAWRCVWHMIQNDLVHGWGLDFKWGYCA-GDRHKKIGVVDSQYVVHTGVPTLGGQ  259 (294)
T ss_pred             CCcCCCCCCCCcceEEEEecceechHHHHHHHhcccCCCccccchhhhHHHHh-ccccccEEEEeeEEEEEcCCCcCCCc
Confidence            88888999999999999999999999999999999999999999999999999 78999999999999999999999998


Q ss_pred             CCcccccccCCCchhhhhccccccCCCCCCCCCChHHHHhhhHHHHHHHHHHHHHhHhc
Q 021185          241 TEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVED  299 (316)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vr~r~~~E~~~f~~R~~~a~~~  299 (316)
                      +.++.                         +.++|.+||+||++||++|++||++|++|
T Consensus       260 ~~~~~-------------------------~~~~~~~Vr~r~~~E~~~F~~R~~~a~~~  293 (294)
T PF05212_consen  260 GNSEK-------------------------GKDPREEVRRRSFAEMRIFQKRWANAVKE  293 (294)
T ss_pred             ccccc-------------------------CCchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            86632                         45789999999999999999999999986

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=95.24  E-value=0.069  Score=45.49  Aligned_cols=101  Identities=17%  Similarity=0.242  Sum_probs=68.8

Q ss_pred             ccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCcCCCCCccccccceeccCcccceeeecccCCCCCCCCCCCCC
Q 021185           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPP  171 (316)
Q Consensus        92 ~~YDYIflwDDDL~vd~f~i~ry~~ivr~~gLeISQPALd~~s~~~sh~iT~r~~~~~vHr~~~~~~~~~~C~~~~~~pp  171 (316)
                      +.+|||++.|+|..++..-+.++.+.+++.++.+..|..-...+                                   +
T Consensus        78 ~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~-----------------------------------~  122 (202)
T cd04185          78 LGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLDPDG-----------------------------------S  122 (202)
T ss_pred             cCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeEcCCC-----------------------------------c
Confidence            57999999999999998888888888775555555443322111                                   1


Q ss_pred             ccceEEEecccccHHHHHHHhhhhcCCCcccchhhHHhhhhhcCCCCCcEEEEeeceEEEccCCCC
Q 021185          172 CIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTL  237 (316)
Q Consensus       172 cTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~~ptl  237 (316)
                      +.+      -+++|++++.+ .. ..+.-..||-|.-+.+-+. ..+.+| .+.+..+.|....+.
T Consensus       123 ~~~------~~~~~~~~~~~-g~-~~~~~~~~~eD~~~~~r~~-~~G~~i-~~~~~~~~h~~~~~~  178 (202)
T cd04185         123 FVG------VLISRRVVEKI-GL-PDKEFFIWGDDTEYTLRAS-KAGPGI-YVPDAVVVHKTAINK  178 (202)
T ss_pred             eEE------EEEeHHHHHHh-CC-CChhhhccchHHHHHHHHH-HcCCcE-EecceEEEEcccccc
Confidence            112      14889999877 33 3444567887877755443 245789 999999999985443

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=94.62  E-value=0.088  Score=42.27  Aligned_cols=92  Identities=20%  Similarity=0.150  Sum_probs=61.7

Q ss_pred             cccEEEEecccccCCCCCHHHHHHHHHHh-CCcccCCCcCCCCCccccccceeccCcccceeeecccCCCCCCCCCCCCC
Q 021185           93 EYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPP  171 (316)
Q Consensus        93 ~YDYIflwDDDL~vd~f~i~ry~~ivr~~-gLeISQPALd~~s~~~sh~iT~r~~~~~vHr~~~~~~~~~~C~~~~~~pp  171 (316)
                      .+|||++.|+|..++...+.++.+.+.+. +..+..+.                                          
T Consensus        74 ~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~------------------------------------------  111 (166)
T cd04186          74 KGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK------------------------------------------  111 (166)
T ss_pred             CCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc------------------------------------------
Confidence            79999999999999888888887754443 22222222                                          


Q ss_pred             ccceEEEecccccHHHHHHHhhhhcCCCcccchhhHHhhhhhcCCCCCcEEEEeeceEEEcc
Q 021185          172 CIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG  233 (316)
Q Consensus       172 cTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~  233 (316)
                          +=.-+.+|++++++.+ . .+++....+|-|..+...+. ..+.+|..+....+.|.+
T Consensus       112 ----~~~~~~~~~~~~~~~~-~-~~~~~~~~~~eD~~~~~~~~-~~g~~i~~~~~~~~~h~~  166 (166)
T cd04186         112 ----VSGAFLLVRREVFEEV-G-GFDEDFFLYYEDVDLCLRAR-LAGYRVLYVPQAVIYHHG  166 (166)
T ss_pred             ----CceeeEeeeHHHHHHc-C-CCChhhhccccHHHHHHHHH-HcCCeEEEccceEEEecC
Confidence                0012558999999976 2 23443334777777765543 245799999999999964

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=94.49  E-value=0.16  Score=46.39  Aligned_cols=128  Identities=15%  Similarity=0.084  Sum_probs=73.5

Q ss_pred             ccccEEEEecccccCCCCCHHHHHHHHHHh--CCcccCCCc-CCCCCccccccceeccCcccceeeecccCCCCCCCCCC
Q 021185           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDE--GLEISQPAL-DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYST  168 (316)
Q Consensus        92 ~~YDYIflwDDDL~vd~f~i~ry~~ivr~~--gLeISQPAL-d~~s~~~sh~iT~r~~~~~vHr~~~~~~~~~~C~~~~~  168 (316)
                      +.+|||++.|+|..++.-.+.++++.+++.  +.-+..|.. +.+.+ ...+...... ... +..       .... ..
T Consensus        72 ~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~-~~~-------~~~~-~~  140 (281)
T TIGR01556        72 RGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGTS-RRLPAIHLDG-LLL-RQI-------SLDG-LT  140 (281)
T ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCCc-ccCCceeecc-cce-eee-------cccc-cC
Confidence            379999999999999999999999988876  567777764 33221 1122211111 000 000       0000 00


Q ss_pred             CCCccceEEEecccccHHHHHHHhhhhcCCCcccchhhHHhhhhhcCCCCCcEEEEeeceEEEcc
Q 021185          169 APPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG  233 (316)
Q Consensus       169 ~ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~  233 (316)
                      .+.-+.++=.-..+++|++++.+ .++ ++..-.++.|.-|..-+. ..+.+|.++....+.|..
T Consensus       141 ~~~~~~~~~~sg~li~~~~~~~i-G~f-de~~fi~~~D~e~~~R~~-~~G~~i~~~~~~~~~H~~  202 (281)
T TIGR01556       141 TPQKTSFLISSGCLITREVYQRL-GMM-DEELFIDHVDTEWSLRAQ-NYGIPLYIDPDIVLEHRI  202 (281)
T ss_pred             CceeccEEEcCcceeeHHHHHHh-CCc-cHhhcccchHHHHHHHHH-HCCCEEEEeCCEEEEEec
Confidence            11111111001236899999988 444 333334667877743332 235689999999999974

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=92.42  E-value=2.5  Score=39.13  Aligned_cols=139  Identities=14%  Similarity=0.091  Sum_probs=76.0

Q ss_pred             ccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCcCCCCC-cccccccee-cc---CcccceeeecccCCCCCCCC
Q 021185           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKS-EVHHPITAR-RR---NSKAHRRMYKYKGSGRCDDY  166 (316)
Q Consensus        92 ~~YDYIflwDDDL~vd~f~i~ry~~ivr~~gLeISQPALd~~s~-~~sh~iT~r-~~---~~~vHr~~~~~~~~~~C~~~  166 (316)
                      +..|||++.|.|..++..-++++++.+.+..-.+.-|.+..-.+ ...+.-... ..   ...++...........+...
T Consensus        82 A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (299)
T cd02510          82 ATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEERRRES  161 (299)
T ss_pred             ccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCHHHhhhcC
Confidence            67899999999999999999999999998887777787653211 122221110 00   00000000000000000111


Q ss_pred             CCCCCccceEEEecccccHHHHHHHhhhhcCCCcccch-hhHHhh-hhhcCCCCCcEEEEeeceEEEccC
Q 021185          167 STAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG-LDIQLG-YCAQGDRTKNVGVVDSEYIVHLGL  234 (316)
Q Consensus       167 ~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWG-LD~~w~-~c~~g~~~~kiGVVDa~~V~H~~~  234 (316)
                      +..+..+.++-..+=+|+|++|..+ ..+ ......|| =|.-+. ++.+  .+.+|-++-...|.|...
T Consensus       162 ~~~~~~~~~~~g~~~~irr~~~~~v-Ggf-De~~~~~~~ED~Dl~~R~~~--~G~~i~~~p~a~v~H~~~  227 (299)
T cd02510         162 PTAPIRSPTMAGGLFAIDREWFLEL-GGY-DEGMDIWGGENLELSFKVWQ--CGGSIEIVPCSRVGHIFR  227 (299)
T ss_pred             CCCCccCccccceeeEEEHHHHHHh-CCC-CCcccccCchhHHHHHHHHH--cCCeEEEeeccEEEEecc
Confidence            1122223333333446899999988 333 44455665 344442 2221  235799999999999864

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=90.27  E-value=0.65  Score=40.30  Aligned_cols=125  Identities=14%  Similarity=0.117  Sum_probs=62.7

Q ss_pred             cccEEEEecccccCCCCCHHHHH---HHHH-HhCCcccCCCcCCCCCccccccceeccCcccceeeecccCCCCCCCCCC
Q 021185           93 EYNYIFLWDEDIGVENFNPRRYL---SIVK-DEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYST  168 (316)
Q Consensus        93 ~YDYIflwDDDL~vd~f~i~ry~---~ivr-~~gLeISQPALd~~s~~~sh~iT~r~~~~~vHr~~~~~~~~~~C~~~~~  168 (316)
                      .||||++.|+|..++...+.+++   .... ...+-+..|......+....... +.....+  ..  ..    +.    
T Consensus        75 ~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~--~~----~~----  141 (237)
T cd02526          75 GADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPGV-RKSGYKL--RI--QK----EG----  141 (237)
T ss_pred             CCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccce-eccCccc--ee--cc----cc----
Confidence            68999999999999988888885   2222 22445555554322111111111 1100000  00  00    00    


Q ss_pred             CCCcc--ceEEEecccccHHHHHHHhhhhcCCCcccchhhHHhhhhhcCCCCCcEEEEeeceEEEcc
Q 021185          169 APPCI--GWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG  233 (316)
Q Consensus       169 ~ppcT--gFVEiMaPVFSR~Awrcvw~miqNdlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~  233 (316)
                      ..++.  .++=.-+-+|+|++++.+ ..+ .+.....|-|+.+...+. ..+.++..+....|.|..
T Consensus       142 ~~~~~~~~~~~~~~~~~rr~~~~~~-ggf-d~~~~~~~eD~d~~~r~~-~~G~~~~~~~~~~v~h~~  205 (237)
T cd02526         142 EEGLKEVDFLITSGSLISLEALEKV-GGF-DEDLFIDYVDTEWCLRAR-SKGYKIYVVPDAVLKHEL  205 (237)
T ss_pred             cCCceEeeeeeccceEEcHHHHHHh-CCC-CHHHcCccchHHHHHHHH-HcCCcEEEEcCeEEEecc
Confidence            00010  011011125899999988 333 222223355666654442 235689888888888864

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=89.69  E-value=0.44  Score=41.04  Aligned_cols=93  Identities=17%  Similarity=0.141  Sum_probs=55.2

Q ss_pred             ccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCcCCCCCccccccceeccCcccceeeecccCCCCCCCCCCCCC
Q 021185           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPP  171 (316)
Q Consensus        92 ~~YDYIflwDDDL~vd~f~i~ry~~ivr~~gLeISQPALd~~s~~~sh~iT~r~~~~~vHr~~~~~~~~~~C~~~~~~pp  171 (316)
                      +.+|||++.|.|..++...+.++++.+.       +|..+--.|.                          |        
T Consensus        85 a~~d~i~~~D~D~~~~~~~l~~l~~~~~-------~~~~~~v~~~--------------------------~--------  123 (196)
T cd02520          85 ARYDILVISDSDISVPPDYLRRMVAPLM-------DPGVGLVTCL--------------------------C--------  123 (196)
T ss_pred             CCCCEEEEECCCceEChhHHHHHHHHhh-------CCCCCeEEee--------------------------c--------
Confidence            5799999999999887777777765542       2322211110                          0        


Q ss_pred             ccceEEEecccccHHHHHHHhhhhcCCCcccchhhHHhhhhhcCCCCCcEEEEeeceEEEcc
Q 021185          172 CIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG  233 (316)
Q Consensus       172 cTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~  233 (316)
                      ++    ..+=+|+|++++.+=. + .....-.+=|+.+...+. ..+.+|.+++.. ++|..
T Consensus       124 ~~----g~~~~~r~~~~~~~gg-f-~~~~~~~~eD~~l~~rl~-~~G~~i~~~~~~-~~~~~  177 (196)
T cd02520         124 AF----GKSMALRREVLDAIGG-F-EAFADYLAEDYFLGKLIW-RLGYRVVLSPYV-VMQPL  177 (196)
T ss_pred             cc----CceeeeEHHHHHhccC-h-HHHhHHHHHHHHHHHHHH-HcCCeEEEcchh-eeccC
Confidence            00    1234789999987722 2 221223467888876654 346789888775 55543

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=88.22  E-value=2  Score=37.13  Aligned_cols=127  Identities=9%  Similarity=-0.011  Sum_probs=68.0

Q ss_pred             ccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCcCCCCCccccccceeccCcccceeeecccCCCCCCCC-C-CC
Q 021185           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDY-S-TA  169 (316)
Q Consensus        92 ~~YDYIflwDDDL~vd~f~i~ry~~ivr~~gLeISQPALd~~s~~~sh~iT~r~~~~~vHr~~~~~~~~~~C~~~-~-~~  169 (316)
                      +.+|||.+.|+|..++...++++++.+++.+..+.++...................+.+.     ......+... . ..
T Consensus        80 a~~d~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  154 (249)
T cd02525          80 SRGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPMETIGESKFQKAIAVAQSSPLG-----SGGSAYRGGAVKIGY  154 (249)
T ss_pred             hCCCEEEEECCCccCCHHHHHHHHHHHhcCCCCEEecceecCCCChHHHHHHHHhhchhc-----cCCcccccccccccc
Confidence            479999999999999999999999888888877766554321100111000000000000     0000000000 0 00


Q ss_pred             CCccceEEEecccccHHHHHHHhhhhcCCCcccchhhHHhh-hhhcCCCCCcEEEEeeceEEEcc
Q 021185          170 PPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLG-YCAQGDRTKNVGVVDSEYIVHLG  233 (316)
Q Consensus       170 ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWGLD~~w~-~c~~g~~~~kiGVVDa~~V~H~~  233 (316)
                      ..+.++   |  +|+|++|+.+ ..+ +. ....|-|+.+. +|.+  .+.++..+....+.|..
T Consensus       155 ~~~~~~---~--~~~~~~~~~~-g~~-~~-~~~~~eD~~l~~r~~~--~G~~~~~~~~~~~~~~~  209 (249)
T cd02525         155 VDTVHH---G--AYRREVFEKV-GGF-DE-SLVRNEDAELNYRLRK--AGYKIWLSPDIRVYYYP  209 (249)
T ss_pred             cccccc---c--eEEHHHHHHh-CCC-Cc-ccCccchhHHHHHHHH--cCcEEEEcCCeEEEEcC
Confidence            011111   1  5789999887 323 22 22346777665 4442  35689999988888875

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=88.02  E-value=1.1  Score=38.87  Aligned_cols=198  Identities=17%  Similarity=0.110  Sum_probs=88.9

Q ss_pred             cEEEEEecccchhhHHHHHhhCCC---CCcEEEEEEecCccccccc-c-----cccCceeEEEeec---c--cchhhhcc
Q 021185           19 NLLAIAAGIKQKKIVDQIVRKFPS---KDFVVMLFHYDGVVDEWKD-L-----VWADRAIHVSAAN---Q--TKWWFAKR   84 (316)
Q Consensus        19 ~Ll~~~VG~kqk~~vd~~v~kf~~---~nF~v~LfhYDg~vd~w~d-~-----ews~~aiHv~a~k---q--tKWw~akR   84 (316)
                      -.|++|+-.. ...+...++-...   .++.|+++- |+..++=.+ +     ++....+++....   +  +|-.-++.
T Consensus         3 v~Vvip~~~~-~~~l~~~l~sl~~~~~~~~~v~vvd-~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~a~n~   80 (228)
T PF13641_consen    3 VSVVIPAYNE-DDVLRRCLESLLAQDYPRLEVVVVD-DGSDDETAEILRALAARYPRVRVRVIRRPRNPGPGGKARALNE   80 (228)
T ss_dssp             EEEE--BSS--HHHHHHHHHHHTTSHHHTEEEEEEE-E-SSS-GCTTHHHHHHTTGG-GEEEEE----HHHHHHHHHHHH
T ss_pred             EEEEEEecCC-HHHHHHHHHHHHcCCCCCeEEEEEE-CCCChHHHHHHHHHHHHcCCCceEEeecCCCCCcchHHHHHHH
Confidence            4455665433 2355555554432   468888876 333333211 1     2333234543322   2  23322222


Q ss_pred             ccCccccccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCcCCCCCccccccceeccCcccceeeecccCCCCCC
Q 021185           85 FLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCD  164 (316)
Q Consensus        85 fLHPdiv~~YDYIflwDDDL~vd~f~i~ry~~ivr~~gLeISQPALd~~s~~~sh~iT~r~~~~~vHr~~~~~~~~~~C~  164 (316)
                      .+.   ...+|||++.|+|..++...+.++++.+...+..+.++......+.  ..++.-......+..  ......  .
T Consensus        81 ~~~---~~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~--~  151 (228)
T PF13641_consen   81 ALA---AARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDR--NWLTRLQDLFFARWH--LRFRSG--R  151 (228)
T ss_dssp             HHH---H---SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCC--CEEEE-TT--S-EET--TTS-TT---
T ss_pred             HHH---hcCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCC--CHHHHHHHHHHhhhh--hhhhhh--h
Confidence            221   1459999999999999999999999999778888888665332111  111111110000000  000000  0


Q ss_pred             CCCCCCCccceEEEecccccHHHHHHHhhhhcCCCcccchhhHHhhhhhcCCCCCcEEEEeeceEEEccCCC
Q 021185          165 DYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPT  236 (316)
Q Consensus       165 ~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~~pt  236 (316)
                      .....+.++|    -+=+|+|++++.+- . ++.  ..-|=|+.+...+.. .+.+|.......|.|...++
T Consensus       152 ~~~~~~~~~G----~~~~~rr~~~~~~g-~-fd~--~~~~eD~~l~~r~~~-~G~~~~~~~~~~v~~~~~~~  214 (228)
T PF13641_consen  152 RALGVAFLSG----SGMLFRRSALEEVG-G-FDP--FILGEDFDLCLRLRA-AGWRIVYAPDALVYHEEPSS  214 (228)
T ss_dssp             B----S-B------TEEEEEHHHHHHH--S---S--SSSSHHHHHHHHHHH-TT--EEEEEEEEEEE--SSS
T ss_pred             cccceeeccC----cEEEEEHHHHHHhC-C-CCC--CCcccHHHHHHHHHH-CCCcEEEECCcEEEEeCCCC
Confidence            0000111221    12368999999884 2 233  444578877644432 45789999888888886444

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=85.50  E-value=0.47  Score=40.88  Aligned_cols=129  Identities=13%  Similarity=-0.002  Sum_probs=72.4

Q ss_pred             ccccEEEEecccccCCCCCHHHHHHHHHH-hCCcccCCCcC--CCCCc--cccccceeccCcccceeeecccCCCCCCCC
Q 021185           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKD-EGLEISQPALD--PVKSE--VHHPITARRRNSKAHRRMYKYKGSGRCDDY  166 (316)
Q Consensus        92 ~~YDYIflwDDDL~vd~f~i~ry~~ivr~-~gLeISQPALd--~~s~~--~sh~iT~r~~~~~vHr~~~~~~~~~~C~~~  166 (316)
                      +.+|||++.|+|..++...+.++++.+.+ .++.+.++...  ...+.  +......... . +.+.+.  .+...    
T Consensus        83 a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~--~~~~~----  154 (234)
T cd06421          83 TTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNEQE-L-FYGVIQ--PGRDR----  154 (234)
T ss_pred             CCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchhHHHHHHHHHH-H-HHHHHH--HHHhh----
Confidence            48999999999999999999999999987 77777776421  11111  0000000000 0 000000  00000    


Q ss_pred             CCCCCccceEEEecccccHHHHHHHhhhhcCCCcccchhhHHhhhhhcCCCCCcEEEEeeceEEEccCCCC
Q 021185          167 STAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTL  237 (316)
Q Consensus       167 ~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~~ptl  237 (316)
                         .++ .++=.+.=+|+|++++.+-. +..   ...+-|+.+..-+. ..+.+|..++...+.|...+++
T Consensus       155 ---~~~-~~~~g~~~~~r~~~~~~ig~-~~~---~~~~eD~~l~~r~~-~~g~~i~~~~~~~~~~~~~~~~  216 (234)
T cd06421         155 ---WGA-AFCCGSGAVVRREALDEIGG-FPT---DSVTEDLATSLRLH-AKGWRSVYVPEPLAAGLAPETL  216 (234)
T ss_pred             ---cCC-ceecCceeeEeHHHHHHhCC-CCc---cceeccHHHHHHHH-HcCceEEEecCccccccCCccH
Confidence               011 12223455789999998843 322   34578888864332 2346888888877776654433

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=84.28  E-value=0.77  Score=38.81  Aligned_cols=119  Identities=12%  Similarity=0.028  Sum_probs=64.2

Q ss_pred             cccccEEEEecccccCCCCCHHHHHHHHHHh-CCcccCCCcCCC--CCccccccceeccCcccceeeecccCCCCCCCCC
Q 021185           91 VAEYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPALDPV--KSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYS  167 (316)
Q Consensus        91 v~~YDYIflwDDDL~vd~f~i~ry~~ivr~~-gLeISQPALd~~--s~~~sh~iT~r~~~~~vHr~~~~~~~~~~C~~~~  167 (316)
                      .+.+|||++.|+|..++.-.+.++++.+.+. +..|..+....-  .+.......  .+..  .+..+. -....|.   
T Consensus        78 ~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~-~~~~~~~---  149 (201)
T cd04195          78 HCTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGKRR--LPTS--HDDILK-FARRRSP---  149 (201)
T ss_pred             hcCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeecccc--CCCC--HHHHHH-HhccCCC---
Confidence            4689999999999999988899988887654 566665543211  111111111  0100  000000 0001111   


Q ss_pred             CCCCccceEEEecccccHHHHHHHhhhhcCCCcccchhhHHhhhhhcCCCCCcEEEEeeceEE
Q 021185          168 TAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIV  230 (316)
Q Consensus       168 ~~ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~  230 (316)
                              +..++=+|.|+++..+-. + ...  -.+-|+.+...+- ..+.++..+....+.
T Consensus       150 --------~~~~~~~~rr~~~~~~g~-~-~~~--~~~eD~~~~~r~~-~~g~~~~~~~~~~~~  199 (201)
T cd04195         150 --------FNHPTVMFRKSKVLAVGG-Y-QDL--PLVEDYALWARML-ANGARFANLPEILVK  199 (201)
T ss_pred             --------CCChHHhhhHHHHHHcCC-c-CCC--CCchHHHHHHHHH-HcCCceecccHHHhh
Confidence                    111223689999988743 2 233  5677888765542 235678877655443

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>COG1216 Predicted glycosyltransferases [General function prediction only]

Probab=83.81  E-value=5.9  Score=37.22  Aligned_cols=138  Identities=14%  Similarity=0.004  Sum_probs=84.9

Q ss_pred             ccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCcCCCCCccccccceeccCcccceeeecccCCCCCCC----CCCC
Q 021185           94 YNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDD----YSTA  169 (316)
Q Consensus        94 YDYIflwDDDL~vd~f~i~ry~~ivr~~gLeISQPALd~~s~~~sh~iT~r~~~~~vHr~~~~~~~~~~C~~----~~~~  169 (316)
                      |+|++++++|..++...++++++.+++.+-...-|++-.+...-.+.-... .........   .....+..    ....
T Consensus        85 ~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~  160 (305)
T COG1216          85 DDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESLYIDRRG-GESDGLTGG---WRASPLLEIAPDLSSY  160 (305)
T ss_pred             CcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchheec-ccccccccc---ceecccccccccccch
Confidence            559999999999999999999999999988887777654322112221111 110000000   00011111    0111


Q ss_pred             CCccceEEEecccccHHHHHHHhhhhcCCCcccchhhHHhhhhhcCCCCCcEEEEeeceEEEccCCCCC
Q 021185          170 PPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLG  238 (316)
Q Consensus       170 ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~~ptlg  238 (316)
                      +.+-.++..-+-+++|++++.+= . +...-=...-|.-|..-+. ..+.+|..+=+-.|.|..--+-+
T Consensus       161 ~~~~~~~~G~~~li~~~~~~~vG-~-~de~~F~y~eD~D~~~R~~-~~G~~i~~~p~a~i~H~~g~s~~  226 (305)
T COG1216         161 LEVVASLSGACLLIRREAFEKVG-G-FDERFFIYYEDVDLCLRAR-KAGYKIYYVPDAIIYHKIGSSKG  226 (305)
T ss_pred             hhhhhhcceeeeEEcHHHHHHhC-C-CCcccceeehHHHHHHHHH-HcCCeEEEeeccEEEEeccCCCC
Confidence            22333667777889999999983 2 4445566677777765553 23458999999999998744444

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=81.30  E-value=2.9  Score=34.43  Aligned_cols=37  Identities=8%  Similarity=-0.049  Sum_probs=27.5

Q ss_pred             ccccEEEEecccccCCCCCHHHHHHHH-HHhCCcccCC
Q 021185           92 AEYNYIFLWDEDIGVENFNPRRYLSIV-KDEGLEISQP  128 (316)
Q Consensus        92 ~~YDYIflwDDDL~vd~f~i~ry~~iv-r~~gLeISQP  128 (316)
                      +..|||++.|+|..++...+.+.++.+ ...+..+..+
T Consensus        74 a~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g  111 (202)
T cd06433          74 ATGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYG  111 (202)
T ss_pred             cCCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEe
Confidence            468999999999999998888888444 3434555443

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1

Probab=81.01  E-value=1.7  Score=37.28  Aligned_cols=36  Identities=17%  Similarity=0.144  Sum_probs=26.9

Q ss_pred             ccccEEEEecccccCCCCCHHHHHHHHHHhCCcccC
Q 021185           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQ  127 (316)
Q Consensus        92 ~~YDYIflwDDDL~vd~f~i~ry~~ivr~~gLeISQ  127 (316)
                      +..|||++.|+|..++...+.++++.+.+.+..+..
T Consensus        77 a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~  112 (224)
T cd06442          77 ARGDVIVVMDADLSHPPEYIPELLEAQLEGGADLVI  112 (224)
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHhcCCCCEEE
Confidence            456999999999888777777888876555555443

Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	316
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 54/406 (13%), Positives = 99/406 (24%), Gaps = 152/406 (37%)

Query: 28  KQKKIV----DQIVRKFPSK---DFVVMLF---HYDGVVDEWKDLVWADRAIHVSAANQT 77
           + K I+    D  V  F  K   D    +      D ++     +    R      + Q 
Sbjct: 17  QYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE 76

Query: 78  KWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNP----RRYLSIVKDEGLEISQPALDPV 133
           +    ++F+  + V   NY FL    I  E   P    R Y+     + L          
Sbjct: 77  E--MVQKFV--EEVLRINYKFLMSP-IKTEQRQPSMMTRMYIEQR--DRLYNDNQVFAKY 129

Query: 134 KSEVHHPITARRRNSKAHRR--------MYKYKGSGR-------CDDYS--TAPPC-IGW 175
                 P    R+     R         +    GSG+       C  Y         I W
Sbjct: 130 NVSRLQPYLKLRQALLELRPAKNVLIDGV---LGSGKTWVALDVCLSYKVQCKMDFKIFW 186

Query: 176 VEM------------------------------MAPVFSRAAW---------------RC 190
           + +                               + +  R                   C
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246

Query: 191 AWYMIQNDLIHAW---GLDIQLGYCAQGDR----TKNVGVVD---SEYIVHLGL-PTLGV 239
              ++  ++ +A      ++    C    +    T+   V D   +    H+ L      
Sbjct: 247 --LLVLLNVQNAKAWNAFNLS---C----KILLTTRFKQVTDFLSAATTTHISLDHHSMT 297

Query: 240 TTEPE-----LNTVGQASDDL-EQIA--NPVALA---------PSQSRRYDN-------- 274
            T  E     L  +     DL  ++   NP  L+          +    + +        
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357

Query: 275 ---------RPEVRRQSYIEMQIFRNR-----------WKHAVEDD 300
                     P   R+ +  + +F              W   ++ D
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSD 403

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	316
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	87.8
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	85.36
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	84.39

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=87.80  E-value=1.8  Score=42.38  Aligned_cols=216  Identities=13%  Similarity=0.127  Sum_probs=100.4

Q ss_pred             CCcEEEEEecccchhhHHHHHhhC----CCCCcEEEEEEecCccccccc-cc-ccC-ceeEEEeecccchhhhccccCcc
Q 021185           17 PMNLLAIAAGIKQKKIVDQIVRKF----PSKDFVVMLFHYDGVVDEWKD-LV-WAD-RAIHVSAANQTKWWFAKRFLHPD   89 (316)
Q Consensus        17 ~k~Ll~~~VG~kqk~~vd~~v~kf----~~~nF~v~LfhYDg~vd~w~d-~e-ws~-~aiHv~a~kqtKWw~akRfLHPd   89 (316)
                      ++.-|++|+=.. ...+...+...    ...++.|+++. ||..|+=.+ ++ +.+ ..+++........-.+...-.-=
T Consensus        93 p~vsviIp~~n~-~~~l~~~l~sl~~q~~~~~~eiivvD-d~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~g~  170 (625)
T 2z86_A           93 DGLSIVIPTYNR-AKILAITLACLCNQKTIYDYEVIVAD-DGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGL  170 (625)
T ss_dssp             CCEEEEEEESSC-HHHHHHHHHHHHTCCCSSCEEEEEEE-ESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHHHH
T ss_pred             CcEEEEEecCCc-HHHHHHHHHHHHhhccCCCeEEEEEe-CCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHHHH
Confidence            345566666433 34444444432    22378887776 677664322 11 111 12333333221111111100111


Q ss_pred             ccccccEEEEecccccCCCCCHHHHHHHHHHhC-CcccCCCcCCCCCccccc------cceec-cC----cccceeeecc
Q 021185           90 IVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEG-LEISQPALDPVKSEVHHP------ITARR-RN----SKAHRRMYKY  157 (316)
Q Consensus        90 iv~~YDYIflwDDDL~vd~f~i~ry~~ivr~~g-LeISQPALd~~s~~~sh~------iT~r~-~~----~~vHr~~~~~  157 (316)
                      -.+.+|||++.|+|..++...+.++++.+.+.. .-+.+|..-...+.....      -..+. +.    ..+.......
T Consensus       171 ~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (625)
T 2z86_A          171 RAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQN  250 (625)
T ss_dssp             HHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC--------------
T ss_pred             HhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccC
Confidence            135789999999999999999999999998743 444444321111000000      00000 00    0000000000


Q ss_pred             cCCCC------CC-CCCCCCCccceEEEecccccHHHHHHHhhhhcCCCcccch-hhHHhhhhhcCCCCCcEEEEeeceE
Q 021185          158 KGSGR------CD-DYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG-LDIQLGYCAQGDRTKNVGVVDSEYI  229 (316)
Q Consensus       158 ~~~~~------C~-~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWG-LD~~w~~c~~g~~~~kiGVVDa~~V  229 (316)
                      .+..+      .. ..........++=..+=+|+|+++..+ ..+ +....+|| =|+-+..-+. ..+.++.++....+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~i-Ggf-de~~~~~g~ED~dl~~Rl~-~~G~~i~~~p~~~v  327 (625)
T 2z86_A          251 KSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRA-GWF-DEEFTHWGGEDNEFGYRLY-REGCYFRSVEGAMA  327 (625)
T ss_dssp             -CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHH-CCC-CTTCSSCCCHHHHHHHHHH-HTTCEEEECGGGCE
T ss_pred             CccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHh-CCC-ccccccCCcchhhhhhhHH-hCCceEEEcccchh
Confidence            00000      00 000000111233334557899999988 333 45555664 5665543332 23469999999999


Q ss_pred             EEccCCCC
Q 021185          230 VHLGLPTL  237 (316)
Q Consensus       230 ~H~~~ptl  237 (316)
                      .|...++.
T Consensus       328 ~H~~~~~~  335 (625)
T 2z86_A          328 YHQEPPGK  335 (625)
T ss_dssp             EEECCC--
T ss_pred             hccCCccc
Confidence            99976543

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=85.36  E-value=1.3  Score=37.40  Aligned_cols=120  Identities=8%  Similarity=-0.080  Sum_probs=68.1

Q ss_pred             ccccEEEEecccccCCCCCHHHHHHHHHHh-CCcccCCCcC----CCCCccccccceeccCcccceeeecccCCCCCCCC
Q 021185           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPALD----PVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDY  166 (316)
Q Consensus        92 ~~YDYIflwDDDL~vd~f~i~ry~~ivr~~-gLeISQPALd----~~s~~~sh~iT~r~~~~~vHr~~~~~~~~~~C~~~  166 (316)
                      +..|||++.|+|..++...+.++++.+++. +..+..+...    ...+...+.. . .+...+.          .    
T Consensus        87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~-~~~~~~~----------~----  150 (255)
T 1qg8_A           87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKET-V-RPAAQVT----------W----  150 (255)
T ss_dssp             CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEE-E-ECCCSCB----------S----
T ss_pred             cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhc-c-CchHHHH----------H----
Confidence            578999999999999999999999999876 6666665432    1111111110 0 0000000          0    


Q ss_pred             CCCCCccceEEEecccccHHHHHHHhhhh---cC-CCcccchhhHHhhhhhcCCCCCcEEEEeeceEEEcc
Q 021185          167 STAPPCIGWVEMMAPVFSRAAWRCAWYMI---QN-DLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG  233 (316)
Q Consensus       167 ~~~ppcTgFVEiMaPVFSR~Awrcvw~mi---qN-dlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~  233 (316)
                          ....++-..+=+|+|++++.+=..+   .+ +.....+-|+.+...+.. .+ ++..++...+.|+.
T Consensus       151 ----~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~-~g-~~~~~~~~~~~~r~  215 (255)
T 1qg8_A          151 ----NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-FY-PFYPLDEELDLNYI  215 (255)
T ss_dssp             ----CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-TC-CBEEEEEEEEEEEE
T ss_pred             ----hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH-hC-CEEEecCcEEEEEE
Confidence                0011122234578999999873112   11 222334567766544432 23 69999998888875

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=84.39  E-value=1.8  Score=40.93  Aligned_cols=139  Identities=15%  Similarity=0.088  Sum_probs=70.9

Q ss_pred             ccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCcCCC-CCccccc----cceeccCcccceeeecccC---CCCC
Q 021185           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPV-KSEVHHP----ITARRRNSKAHRRMYKYKG---SGRC  163 (316)
Q Consensus        92 ~~YDYIflwDDDL~vd~f~i~ry~~ivr~~gLeISQPALd~~-s~~~sh~----iT~r~~~~~vHr~~~~~~~---~~~C  163 (316)
                      +..|||++.|+|..++..-++++++.+++..-.+.-|.++.- ...+.+.    .+...-...++........   ..+-
T Consensus       113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (472)
T 1xhb_A          113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRK  192 (472)
T ss_dssp             CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTT
T ss_pred             ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhccc
Confidence            568999999999999999999999999887665655654210 0011110    0000000000000000000   0000


Q ss_pred             CCCCCCCCccceEEEecccccHHHHHHHhhhhcCCCcccch---hhHHhhhhhcCCCCCcEEEEeeceEEEccCCC
Q 021185          164 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG---LDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPT  236 (316)
Q Consensus       164 ~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWG---LD~~w~~c~~g~~~~kiGVVDa~~V~H~~~pt  236 (316)
                      . ....+-.+.++-..+=+|+|+++..+= . ++.....||   +|+.+.-...   +.+|.++....|.|....+
T Consensus       193 ~-~~~~~~~~~~~~g~~~~irr~~~~~iG-g-fde~~~~~g~ED~dl~~R~~~~---G~~i~~~p~~~v~H~~~~~  262 (472)
T 1xhb_A          193 G-DRTLPVRTPTMAGGLFSIDRDYFQEIG-T-YDAGMDIWGGENLEISFRIWQC---GGTLEIVTCSHVGHVFRKA  262 (472)
T ss_dssp             T-CTTSCEECSBCCSSSEEEEHHHHHHTT-S-CCTTSCTTCCCCSHHHHHHHHT---TCEEEEEEEEEEEEEC---
T ss_pred             C-CCCCcccCccccceeEEEEHHHHHHcC-C-CCCcccccCchhHHHHHHHHhc---CCeEEEccCcEEEEEccCc
Confidence            0 000011111111222357999999882 2 355556674   3444443333   4689999999999987543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	316
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	86.56

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.56  E-value=0.33  Score=41.13  Aligned_cols=215  Identities=13%  Similarity=0.101  Sum_probs=103.4

Q ss_pred             CCCcEEEEEecccchh----hHHHHHhhCCCCCcE-EEEEEecCcccccc--ccc-c---cCceeEEEeecccchhhhcc
Q 021185           16 PPMNLLAIAAGIKQKK----IVDQIVRKFPSKDFV-VMLFHYDGVVDEWK--DLV-W---ADRAIHVSAANQTKWWFAKR   84 (316)
Q Consensus        16 ~~k~Ll~~~VG~kqk~----~vd~~v~kf~~~nF~-v~LfhYDg~vd~w~--d~e-w---s~~aiHv~a~kqtKWw~akR   84 (316)
                      .|..=|++|+=.....    -+++++..= ..++. =+++.=||+.|+--  .++ +   ...-|++....+..=. +.-
T Consensus        21 ~P~vSIIIp~yNe~~~~l~~~l~Si~~qt-~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~~~n~G~-~~a   98 (328)
T d1xhba2          21 LPTTSVVIVFHNEAWSTLLRTVHSVINRS-PRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGL-IRA   98 (328)
T ss_dssp             CCCEEEEEEESSCCHHHHHHHHHHHHHSS-CGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCH-HHH
T ss_pred             CCCEEEEEeccCCcHHHHHHHHHHHHhcC-CCCCCeEEEEEECCCChhhHHHHHHHHHHhcCCCeEEEEecccccc-hHH
Confidence            3455567776543333    344555442 23442 24555688877521  111 1   1122555333222211 111


Q ss_pred             ccCccccccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCcCCCCCc-cc----cccceec--cCcccceeeecc
Q 021185           85 FLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSE-VH----HPITARR--RNSKAHRRMYKY  157 (316)
Q Consensus        85 fLHPdiv~~YDYIflwDDDL~vd~f~i~ry~~ivr~~gLeISQPALd~~s~~-~s----h~iT~r~--~~~~vHr~~~~~  157 (316)
                      .-..=-.+.-|||++.|+|..++.-.++++++.+.+..-.+..|.++.-.+. ..    ...+.-.  .....+......
T Consensus        99 ~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (328)
T d1xhba2          99 RLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQ  178 (328)
T ss_dssp             HHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCH
T ss_pred             HHHHHHhhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccch
Confidence            1111224678999999999999999999999999998877777765321100 00    0000000  000000000000


Q ss_pred             cCCCCCCCCCCCCCccceEEEecccccHHHHHHHhhhhcCCCcccch---hhHHhhhhhcCCCCCcEEEEeeceEEEccC
Q 021185          158 KGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG---LDIQLGYCAQGDRTKNVGVVDSEYIVHLGL  234 (316)
Q Consensus       158 ~~~~~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWG---LD~~w~~c~~g~~~~kiGVVDa~~V~H~~~  234 (316)
                      ..........+.+..+.++..-+=.++|++|..+ ..+ +.....||   +|+-+.....   +.+|..+-...|.|...
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~v-Ggf-De~~~~~g~ED~Dl~~R~~~~---G~~i~~~p~~~v~H~~~  253 (328)
T d1xhba2         179 REMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEI-GTY-DAGMDIWGGENLEISFRIWQC---GGTLEIVTCSHVGHVFR  253 (328)
T ss_dssp             HHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHT-TSC-CTTSCTTCCCCSHHHHHHHHT---TCEEEEEEEEEEEEEC-
T ss_pred             hhhhccccccccccccceecceeeeeeHHHHHHh-CCC-CCCCcCcCchHHHHHHHHHHh---CCeEEEeCCeEEEEeCC
Confidence            0000000011122222233222234789999988 433 55556665   4555554433   46899999999999754


Q ss_pred             CCC
Q 021185          235 PTL  237 (316)
Q Consensus       235 ptl  237 (316)
                      .+.
T Consensus       254 ~~~  256 (328)
T d1xhba2         254 KAT  256 (328)
T ss_dssp             ---
T ss_pred             CCC
Confidence            333