Citrus Sinensis ID: 021203

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------

MTILIDQPELIGSRAEDQNLQEQTNELVLDGGFVVPKTMPNDGFVAPEINSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLGCAFDESNVHHKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGHDDYMYLVAKENGTTLPSAGLFIVRYHSFYPLHKEGAYAHLMNEEDKENLKWLQVFNKYDLYSKSKVLVDVEKVKPYYLSLIEKYFPAKLRW

cEEEEEcccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccccEEEHHHHHccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccccc

cEEEEEcccccHHHHHHccccccHcHEEEcccccccccccccccccccccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHcccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccEEEccccccccccEEEcccccccccccccEEcHHHHccccccccccccccccccccccccccEEEEcccHHHHHHHHHHccccccHHHHHHHHHcccccccccccHHHHccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccccc

mtilidqpeligsraedqNLQEQTNELvldggfvvpktmpndgfvapeinsfgktfrdynaecERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNevvdesdpdldepqIQHLLQSAEAIrkdypdedwLHLTALIHDLGkvltlpkfgglpqwavvgdtfplgcafdesnvhhkyfkenpdsnnpayntkngiytegcgldnvmiswgHDDYMYLVAKengttlpsagLFIVRyhsfyplhkeGAYAHLMNEEDKENLKWLQVFNKYDLYSKSKVLVDVEKVKPYYLSLIEKYFPAKLRW

mtilidqpeligsraeDQNLQEQTNELVLDGGFVVPKTMPNDGFVAPEINSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLGCAFDESNVHHKYFkenpdsnnpAYNTKNGIYTEGCGLDNVMISWGHDDYMYLVAKENGTTLPSAGLFIVRYHSFYPLHKEGAYAHLMNEEDKENLKWLQVFNKYDLyskskvlvdvekvKPYYLSLIekyfpaklrw

*************************ELVLDGGFVVPKTMPNDGFVAPEINSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVD************HLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLGCAFDESNVHHKYFK********AYNTKNGIYTEGCGLDNVMISWGHDDYMYLVAKENGTTLPSAGLFIVRYHSFYPLHKEGAYAHLMNEEDKENLKWLQVFNKYDLYSKSKVLVDVEKVKPYYLSLIEKYFPA****

*TIL*********************************************NSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLGCAFDESNVHHKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGHDDYMYLVAKENGTTLPSAGLFIVRYHSFYPLHKEGAYAHLMNEEDKENLKWLQVFNKYDLYSKSKVLVDVEKVKPYYLSLIEKYFPAKLRW

MTILIDQPELIGSRAEDQ*LQEQTNELVLDGGFVVP*****DGFVAPEINSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLGCAFDESNVHHKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGHDDYMYLVAKENGTTLPSAGLFIVRYHSFYPLHKEGAYAHLMNEEDKENLKWLQVFNKYDLYSKSKVLVDVEKVKPYYLSLIEKYFPAKLRW

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		316	2.2.26 [Sep-21-2011]
O82200		317	Inositol oxygenase 2 OS=A	yes	no	1.0	0.996	0.772	1e-148
Q8H1S0		317	Inositol oxygenase 4 OS=A	no	no	0.996	0.993	0.786	1e-147
Q9FJU4		314	Inositol oxygenase 5 OS=A	no	no	0.987	0.993	0.757	1e-140
Q8L799		311	Inositol oxygenase 1 OS=A	no	no	0.965	0.980	0.723	1e-136
Q5Z8T3		308	Probable inositol oxygena	yes	no	0.965	0.990	0.727	1e-135
Q54GH4		292	Inositol oxygenase OS=Dic	yes	no	0.841	0.910	0.544	6e-82
Q4V8T0		278	Inositol oxygenase OS=Dan	yes	no	0.762	0.866	0.514	3e-70
Q9QXN5		285	Inositol oxygenase OS=Mus	yes	no	0.848	0.940	0.465	9e-69
A7MBE4		285	Inositol oxygenase OS=Bos	yes	no	0.841	0.933	0.472	5e-68
Q9QXN4		285	Inositol oxygenase OS=Rat	yes	no	0.848	0.940	0.457	2e-67

>sp\|O82200\|MIOX2_ARATH Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2	Back alignment and function desciption

 Score =  524 bits (1349), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 245/317 (77%), Positives = 278/317 (87%), Gaps = 1/317 (0%)

Query: 1   MTILIDQPELIGSRAEDQNLQEQTNELVLDGGFVVPKTMPNDGFVAPEINSFGKTFRDY- 59
           MTIL++         E + ++E+ NELVLDGGFVVPK+   D F AP++N  G +FRDY 
Sbjct: 1   MTILVEHFVPDSRVDEKKVIEERDNELVLDGGFVVPKSKETDAFDAPDMNFLGHSFRDYE 60

Query: 60  NAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPD 119
           N E ERQ+ VEEFYR+QHI+QTYDFVKKMR+EY KL+K EMSIWECCELLN VVDESDPD
Sbjct: 61  NGESERQQGVEEFYRMQHIHQTYDFVKKMRKEYGKLNKMEMSIWECCELLNNVVDESDPD 120

Query: 120 LDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLG 179
           LDEPQIQHLLQ+AEAIR+DYPDEDWLHLTALIHDLGKVL LP+FGGLPQWAVVGDTFP+G
Sbjct: 121 LDEPQIQHLLQTAEAIRRDYPDEDWLHLTALIHDLGKVLLLPEFGGLPQWAVVGDTFPVG 180

Query: 180 CAFDESNVHHKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGHDDYMYLVAKENGTT 239
           C FD +N+HHKYFK N D NNP YNTKNG+YTEGCGLDNV++SWGHDDYMYLVAK+NGTT
Sbjct: 181 CTFDSANIHHKYFKGNHDINNPKYNTKNGVYTEGCGLDNVLMSWGHDDYMYLVAKKNGTT 240

Query: 240 LPSAGLFIVRYHSFYPLHKEGAYAHLMNEEDKENLKWLQVFNKYDLYSKSKVLVDVEKVK 299
           LP AGLFI+RYHSFYPLHK GAY HLMN+ED+++LKWL VFNKYDLYSKSKVLVDVE+VK
Sbjct: 241 LPHAGLFIIRYHSFYPLHKAGAYTHLMNDEDRDDLKWLHVFNKYDLYSKSKVLVDVEQVK 300

Query: 300 PYYLSLIEKYFPAKLRW 316
           PYY+SLI KYFPAKL+W
Sbjct: 301 PYYISLINKYFPAKLKW 317

Involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. May be also involved in plant ascorbate biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 3EC: .EC: 9EC: 9EC: .EC: 1

>sp\|Q8H1S0\|MIOX4_ARATH Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1	Back alignment and function description

>sp\|Q9FJU4\|MIOX5_ARATH Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1	Back alignment and function description

>sp\|Q8L799\|MIOX1_ARATH Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1	Back alignment and function description

>sp\|Q5Z8T3\|MIOX_ORYSJ Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1	Back alignment and function description

>sp\|Q54GH4\|MIOX_DICDI Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1	Back alignment and function description

>sp\|Q4V8T0\|MIOX_DANRE Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=1	Back alignment and function description

>sp\|Q9QXN5\|MIOX_MOUSE Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV=2	Back alignment and function description

>sp\|A7MBE4\|MIOX_BOVIN Inositol oxygenase OS=Bos taurus GN=MIOX PE=2 SV=1	Back alignment and function description

>sp\|Q9QXN4\|MIOX_RAT Inositol oxygenase OS=Rattus norvegicus GN=Miox PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		316
255546251		315	myoinositol oxygenase, putative [Ricinus	0.996	1.0	0.835	1e-156
357520775		316	Inositol oxygenase [Medicago truncatula]	0.996	0.996	0.829	1e-154
217071828		316	unknown [Medicago truncatula] gi\|3885027	0.996	0.996	0.826	1e-154
363807385		312	uncharacterized protein LOC100788665 [Gl	0.984	0.996	0.820	1e-153
225445025		309	PREDICTED: probable inositol oxygenase [	0.977	1.0	0.825	1e-152
449446554		317	PREDICTED: inositol oxygenase 2-like [Cu	0.996	0.993	0.823	1e-151
449487993		317	PREDICTED: inositol oxygenase 2-like [Cu	0.996	0.993	0.823	1e-151
192338750		315	myo-inositol oxygenase [Eucalyptus grand	0.996	1.0	0.794	1e-149
350538319		317	myo-inositol oxygenase [Solanum lycopers	0.996	0.993	0.779	1e-149
147810163		309	hypothetical protein VITISV_036400 [Viti	0.971	0.993	0.812	1e-147

>gi\|255546251\|ref\|XP_002514185.1\| myoinositol oxygenase, putative [Ricinus communis] gi\|223546641\|gb\|EEF48139.1\| myoinositol oxygenase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  556 bits (1432), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 264/316 (83%), Positives = 286/316 (90%), Gaps = 1/316 (0%)

Query: 1   MTILIDQPELIGSRAEDQNLQEQTNELVLDGGFVVPKTMPNDGFVAPEINSFGKTFRDYN 60
           MTILI+QPEL GSR +DQ  Q+   ELVLDGGF VPKT  ++GF APEIN+FG +FRDY+
Sbjct: 1   MTILINQPEL-GSRVDDQKHQDDVKELVLDGGFPVPKTSSDEGFDAPEINAFGNSFRDYS 59

Query: 61  AECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPDL 120
           AE ER+KSVEEFYR QHINQTYDFVKKMREEY+KLDKA MSIWECCELLNEVVD+SDPDL
Sbjct: 60  AESERKKSVEEFYRQQHINQTYDFVKKMREEYSKLDKAVMSIWECCELLNEVVDDSDPDL 119

Query: 121 DEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLGC 180
           DEPQIQHLLQSAEAIRKDYP+EDWLHLTALIHDLGKVL LP+FG LPQWAVVGDTFPLGC
Sbjct: 120 DEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVLLLPQFGELPQWAVVGDTFPLGC 179

Query: 181 AFDESNVHHKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGHDDYMYLVAKENGTTL 240
           AFDESN+HH YFKENPDS NP Y+TKNGIY EGCGL+NVMISWGHDDYMYLVAKENGTTL
Sbjct: 180 AFDESNIHHTYFKENPDSKNPTYSTKNGIYEEGCGLENVMISWGHDDYMYLVAKENGTTL 239

Query: 241 PSAGLFIVRYHSFYPLHKEGAYAHLMNEEDKENLKWLQVFNKYDLYSKSKVLVDVEKVKP 300
           P A LFIVR+HSFYPLH+ GAY HLMNE DKE+LKWL +FNKYDLYSKSKVLVDV+ VKP
Sbjct: 240 PPAALFIVRFHSFYPLHRAGAYMHLMNEGDKESLKWLHIFNKYDLYSKSKVLVDVDAVKP 299

Query: 301 YYLSLIEKYFPAKLRW 316
           YY SLI+KYFP KLRW
Sbjct: 300 YYQSLIKKYFPEKLRW 315

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|357520775\|ref\|XP_003630676.1\| Inositol oxygenase [Medicago truncatula] gi\|355524698\|gb\|AET05152.1\| Inositol oxygenase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|217071828\|gb\|ACJ84274.1\| unknown [Medicago truncatula] gi\|388502708\|gb\|AFK39420.1\| unknown [Medicago truncatula] gi\|388507228\|gb\|AFK41680.1\| unknown [Medicago truncatula]	Back alignment and taxonomy information

>gi\|363807385\|ref\|NP_001242635.1\| uncharacterized protein LOC100788665 [Glycine max] gi\|255644784\|gb\|ACU22894.1\| unknown [Glycine max]	Back alignment and taxonomy information

>gi\|225445025\|ref\|XP_002283119.1\| PREDICTED: probable inositol oxygenase [Vitis vinifera] gi\|297738724\|emb\|CBI27969.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449446554\|ref\|XP_004141036.1\| PREDICTED: inositol oxygenase 2-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449487993\|ref\|XP_004157903.1\| PREDICTED: inositol oxygenase 2-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|192338750\|gb\|ACF04280.1\| myo-inositol oxygenase [Eucalyptus grandis]	Back alignment and taxonomy information

>gi\|350538319\|ref\|NP_001234593.1\| myo-inositol oxygenase [Solanum lycopersicum] gi\|240248438\|gb\|ACS45396.1\| myo-inositol oxygenase [Solanum lycopersicum]	Back alignment and taxonomy information

>gi\|147810163\|emb\|CAN78063.1\| hypothetical protein VITISV_036400 [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		316
TAIR\|locus:2052015		317	MIOX2 "myo-inositol oxygenase	0.996	0.993	0.773	4.9e-140
TAIR\|locus:2165061		314	MIOX5 "myo-inositol oxygenase	0.987	0.993	0.757	4.4e-132
TAIR\|locus:2012572		311	MIOX1 "myo-inositol oxygenase	0.965	0.980	0.726	8.7e-127
DICTYBASE\|DDB_G0290161		292	miox "inositol oxygenase" [Dic	0.841	0.910	0.544	7.6e-80
FB\|FBgn0036262		292	CG6910 [Drosophila melanogaste	0.816	0.883	0.518	1.7e-73
ASPGD\|ASPL0000003632		312	AN5985 [Emericella nidulans (t	0.810	0.820	0.545	2.8e-73
UNIPROTKB\|G4N272		317	MGG_09462 "Inositol oxygenase	0.962	0.958	0.474	5.5e-70
ZFIN\|ZDB-GENE-050913-113		283	miox "myo-inositol oxygenase"	0.841	0.939	0.488	7e-70
CGD\|CAL0002203		340	orf19.3894 [Candida albicans (	0.803	0.747	0.521	2.1e-68
UNIPROTKB\|Q5AKC6		340	IOX1 "Likely inositol oxygenas	0.803	0.747	0.521	2.1e-68

TAIR\|locus:2052015 MIOX2 "myo-inositol oxygenase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
 Identities = 246/318 (77%), Positives = 282/318 (88%)

Query:     1 MTILIDQPELIGSRAEDQN-LQEQTNELVLDGGFVVPKTMPNDGFVAPEINSFGKTFRDY 59
             MTIL++   +  SR +++  ++E+ NELVLDGGFVVPK+   D F AP++N  G +FRDY
Sbjct:     1 MTILVEH-FVPDSRVDEKKVIEERDNELVLDGGFVVPKSKETDAFDAPDMNFLGHSFRDY 59

Query:    60 -NAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDP 118
              N E ERQ+ VEEFYR+QHI+QTYDFVKKMR+EY KL+K EMSIWECCELLN VVDESDP
Sbjct:    60 ENGESERQQGVEEFYRMQHIHQTYDFVKKMRKEYGKLNKMEMSIWECCELLNNVVDESDP 119

Query:   119 DLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPL 178
             DLDEPQIQHLLQ+AEAIR+DYPDEDWLHLTALIHDLGKVL LP+FGGLPQWAVVGDTFP+
Sbjct:   120 DLDEPQIQHLLQTAEAIRRDYPDEDWLHLTALIHDLGKVLLLPEFGGLPQWAVVGDTFPV 179

Query:   179 GCAFDESNVHHKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGHDDYMYLVAKENGT 238
             GC FD +N+HHKYFK N D NNP YNTKNG+YTEGCGLDNV++SWGHDDYMYLVAK+NGT
Sbjct:   180 GCTFDSANIHHKYFKGNHDINNPKYNTKNGVYTEGCGLDNVLMSWGHDDYMYLVAKKNGT 239

Query:   239 TLPSAGLFIVRYHSFYPLHKEGAYAHLMNEEDKENLKWLQVFNKYDLYSKSKVLVDVEKV 298
             TLP AGLFI+RYHSFYPLHK GAY HLMN+ED+++LKWL VFNKYDLYSKSKVLVDVE+V
Sbjct:   240 TLPHAGLFIIRYHSFYPLHKAGAYTHLMNDEDRDDLKWLHVFNKYDLYSKSKVLVDVEQV 299

Query:   299 KPYYLSLIEKYFPAKLRW 316
             KPYY+SLI KYFPAKL+W
Sbjct:   300 KPYYISLINKYFPAKLKW 317

GO:0005506 "iron ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0019310 "inositol catabolic process" evidence=IEA

GO:0050113 "inositol oxygenase activity" evidence=IEA;IMP

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006949 "syncytium formation" evidence=IGI

TAIR\|locus:2165061 MIOX5 "myo-inositol oxygenase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2012572 MIOX1 "myo-inositol oxygenase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0290161 miox "inositol oxygenase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

FB\|FBgn0036262 CG6910 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000003632 AN5985 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|G4N272 MGG_09462 "Inositol oxygenase 1" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-050913-113 miox "myo-inositol oxygenase" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

CGD\|CAL0002203 orf19.3894 [Candida albicans (taxid:5476)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5AKC6 IOX1 "Likely inositol oxygenase" [Candida albicans SC5314 (taxid:237561)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9QXN5	MIOX_MOUSE	1, ., 1, 3, ., 9, 9, ., 1	0.4652	0.8481	0.9403	yes	no
Q9QXN4	MIOX_RAT	1, ., 1, 3, ., 9, 9, ., 1	0.4578	0.8481	0.9403	yes	no
Q4V8T0	MIOX_DANRE	1, ., 1, 3, ., 9, 9, ., 1	0.5142	0.7626	0.8669	yes	no
Q8L799	MIOX1_ARATH	1, ., 1, 3, ., 9, 9, ., 1	0.7236	0.9651	0.9807	no	no
Q9UGB7	MIOX_HUMAN	1, ., 1, 3, ., 9, 9, ., 1	0.4615	0.8481	0.9403	yes	no
Q5Z8T3	MIOX_ORYSJ	1, ., 1, 3, ., 9, 9, ., 1	0.7272	0.9651	0.9902	yes	no
Q9FJU4	MIOX5_ARATH	1, ., 1, 3, ., 9, 9, ., 1	0.7578	0.9873	0.9936	no	no
Q5REY9	MIOX_PONAB	1, ., 1, 3, ., 9, 9, ., 1	0.4652	0.8481	0.9403	yes	no
A7MBE4	MIOX_BOVIN	1, ., 1, 3, ., 9, 9, ., 1	0.4723	0.8417	0.9333	yes	no
Q8H1S0	MIOX4_ARATH	1, ., 1, 3, ., 9, 9, ., 1	0.7861	0.9968	0.9936	no	no
Q54GH4	MIOX_DICDI	1, ., 1, 3, ., 9, 9, ., 1	0.5441	0.8417	0.9109	yes	no
O82200	MIOX2_ARATH	1, ., 1, 3, ., 9, 9, ., 1	0.7728	1.0	0.9968	yes	no
Q8WN98	MIOX_PIG	1, ., 1, 3, ., 9, 9, ., 1	0.4649	0.8417	0.9432	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.13.99	0.983
3rd Layer	1.13.99.1	0.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	scaffold_303866.1	annotation not avaliable (317 aa)
		(Arabidopsis lyrata)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		316
pfam05153		255	pfam05153, DUF706, Family of unknown function (DUF	1e-173

>gnl\|CDD\|191210 pfam05153, DUF706, Family of unknown function (DUF706)	Back alignment and domain information

 Score =  478 bits (1233), Expect = e-173
 Identities = 167/257 (64%), Positives = 194/257 (75%), Gaps = 2/257 (0%)

Query: 60  NAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPD 119
             E      V EFYR QH  QT DFVKK R E+ K  +A+M+IWE  ELLN +VDESDPD
Sbjct: 1   YEEAPLCDRVREFYREQHTKQTVDFVKKARAEFLKFTRAKMTIWEALELLNTLVDESDPD 60

Query: 120 LDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLG 179
            D PQIQHLLQ+AEAIR+D+PD DW+HLT LIHDLGKVL    FGG PQWAVVGDTFP+G
Sbjct: 61  TDLPQIQHLLQTAEAIRRDHPDPDWMHLTGLIHDLGKVLAF--FGGEPQWAVVGDTFPVG 118

Query: 180 CAFDESNVHHKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGHDDYMYLVAKENGTT 239
           CAF ES V+ + FK NPD +NP YNTK GIY   CGLDNVM+SWGHD+Y+Y V K N +T
Sbjct: 119 CAFSESIVYPESFKGNPDYDNPKYNTKYGIYQPNCGLDNVMMSWGHDEYLYQVLKHNKST 178

Query: 240 LPSAGLFIVRYHSFYPLHKEGAYAHLMNEEDKENLKWLQVFNKYDLYSKSKVLVDVEKVK 299
           LP   L+++RYHSFYP H+EGAY HLMNE+D+E LKW++ FN YDLYSKS    DVE +K
Sbjct: 179 LPEEALYMIRYHSFYPWHREGAYTHLMNEKDEEMLKWVKAFNPYDLYSKSDDPPDVEALK 238

Query: 300 PYYLSLIEKYFPAKLRW 316
           PYY  LI+KYFP  L W
Sbjct: 239 PYYQELIDKYFPGVLEW 255

Family of uncharacterized eukaryotic function. Some members have a described putative function, but a common theme is not evident. Length = 255

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		316
PF05153		253	DUF706: Family of unknown function (DUF706) ; Inte	100.0
KOG1573		204	consensus Aldehyde reductase [General function pre	100.0
TIGR03276		179	Phn-HD phosphonate degradation operons associated	97.21
TIGR00277		80	HDIG uncharacterized domain HDIG. This domain is f	95.39
smart00471		124	HDc Metal dependent phosphohydrolases with conserv	95.25
TIGR00488		158	putative HD superfamily hydrolase of NAD metabolis	94.14
PRK00106		535	hypothetical protein; Provisional	92.59
PF01966		122	HD: HD domain; InterPro: IPR006674 This domain is	92.43
TIGR03319		514	YmdA_YtgF conserved hypothetical protein YmdA/YtgF	91.28
COG4341		186	Predicted HD phosphohydrolase [General function pr	90.77
TIGR01596		177	cas3_HD CRISPR-associated endonuclease Cas3-HD. CR	89.85
TIGR00295		164	conserved hypothetical protein TIGR00295. This set	87.46
COG2316		212	Predicted hydrolase (HD superfamily) [General func	86.26
PF08668		196	HDOD: HDOD domain; InterPro: IPR013976 This domain	86.21
cd00077		145	HDc Metal dependent phosphohydrolases with conserv	86.07
PRK12705		508	hypothetical protein; Provisional	85.88

>PF05153 DUF706: Family of unknown function (DUF706) ; InterPro: IPR007828 Inositol oxygenase (1	Back alignment and domain information

Probab=100.00  E-value=2.7e-143  Score=988.71  Aligned_cols=251  Identities=70%  Similarity=1.217  Sum_probs=201.4

Q ss_pred             hhhHHHHHHHHHhhhhchHHHHHHHHHHHccCCCccccHHHHHHHHHhhhCCCCCCCCchHHHHHHHHHHHHHhcCCCCC
Q 021203           64 ERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDED  143 (316)
Q Consensus        64 ~r~~~V~~fYr~~H~~QTvdfv~~~~~~~~~~~~~~MsI~EA~e~Ln~lvDeSDPD~dl~qi~H~lQTAEaiR~d~p~pd  143 (316)
                      +|++||++|||+||++||||||++||++|++++|++|||||||++||+||||||||+|+|||+||||||||||+|||+||
T Consensus         3 ~~~~~V~~~Y~~~h~~QTv~fv~~~~~~~~~~~~~~Mti~eA~~~L~~LvDeSDPD~d~~~i~H~lQTAEaiR~d~~~~d   82 (253)
T PF05153_consen    3 EACDRVKEFYRLQHTNQTVDFVKKMRAKYLKFDHAEMTIWEALELLNTLVDESDPDTDLPQIQHALQTAEAIRRDHPDPD   82 (253)
T ss_dssp             --HHHHHHHHHHHHCC--HHHHHHHHHHHTT--SEEE-HHHHHHHGGG---TT-TT--S-HHHHHHHHHHHHHHHSTT-H
T ss_pred             cHhHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCcceeeHHHHHHHHHHhccCccCCCchhHHHHHHHHHHHHHHhCCCcc
Confidence            35667999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhhhhcccchhcccCCCCCCCceEeccceeeccccCCCcccccccccCCCCCCCCCCCCCCcccCCCCcccccccc
Q 021203          144 WLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLGCAFDESNVHHKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISW  223 (316)
Q Consensus       144 W~qLtGLiHDLGKvl~~~~fg~~pQW~VVGDTfPvGC~f~~~iv~~~~F~~NPD~~~p~YnTk~GiY~p~CGLdnV~mSW  223 (316)
                      |||||||||||||||++  ||++|||+||||||||||+|+++|||+++|++|||.+||+|||++|||+||||||||+|||
T Consensus        83 W~~LtGLiHDLGKvl~~--~~~e~QW~vvGDTfpVGC~f~~~iv~~e~f~~NpD~~~~~YnTk~GiY~~~CGLdnv~msW  160 (253)
T PF05153_consen   83 WMQLTGLIHDLGKVLAL--FGGEPQWAVVGDTFPVGCAFSESIVFPEFFKDNPDSKNPRYNTKYGIYEPNCGLDNVMMSW  160 (253)
T ss_dssp             HHHHHHHHTTGGGHHHH--C-T--GGGTSS---BSSS---TTSTTCCC-TT-GGGCSTTTSSSSTT--TT--GGGS-B-S
T ss_pred             hhhheehhccchhhhhh--hcCCCCceeecCceeEecccCccccChhhHhhCCCCCCccccCCCCccCCCCCccceeecC
Confidence            99999999999999999  9899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchhHHHHHHHhcCCCCCcchhhhhhhccccccccCCcccccCChhhHHHHHHHHHcCCccccccCCCCCChhhhhhchH
Q 021203          224 GHDDYMYLVAKENGTTLPSAGLFIVRYHSFYPLHKEGAYAHLMNEEDKENLKWLQVFNKYDLYSKSKVLVDVEKVKPYYL  303 (316)
Q Consensus       224 GHDEYlY~Vlk~n~stLP~eaL~mIRyHSFYpwH~~gaY~hL~ne~D~~~l~wV~~Fn~yDLYSKs~~~pdve~lkPYY~  303 (316)
                      |||||||+|||+|+||||+|||+|||||||||||++|||+||||++|.+||+||++|||||||||++++||||+|||||+
T Consensus       161 gHDEYlY~Vlk~n~~tLP~eaL~mIRyhSfypwH~~~~Y~~L~~~~D~~~l~wv~~Fn~~dLYSK~~~~pdve~l~PYY~  240 (253)
T PF05153_consen  161 GHDEYLYQVLKHNKSTLPEEALYMIRYHSFYPWHREGAYDHLMNEEDEEMLKWVKEFNKYDLYSKSDEPPDVEELKPYYQ  240 (253)
T ss_dssp             SHHHHHHHHHHHCT----HHHHHHHHHTT-HHHHTTS--TTT--HHHHHHHHHHHHHHHHHHHT--SS---HCCCHHHHH
T ss_pred             CchHHHHHHHHcccCccCHHHHHHHHHhccccccccchhhHhhccCcHHHHHHHHHhCCcceeeCCCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCCC
Q 021203          304 SLIEKYFPAKLRW  316 (316)
Q Consensus       304 ~LIdKY~P~~L~W  316 (316)
                      +|||||||++|+|
T Consensus       241 ~LidKy~P~~l~W  253 (253)
T PF05153_consen  241 SLIDKYFPGKLKW  253 (253)
T ss_dssp             HHHHHHS-S-EEE
T ss_pred             HHHHHHCCCcCCC
Confidence            9999999999999

13.99.1 from EC) is involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. It may be also involved in plant ascorbate biosynthesis [, ].; GO: 0005506 iron ion binding, 0050113 inositol oxygenase activity, 0019310 inositol catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 2HUO_A 3BXD_A 2IBN_A.

>KOG1573 consensus Aldehyde reductase [General function prediction only]	Back alignment and domain information

>TIGR03276 Phn-HD phosphonate degradation operons associated HDIG domain protein	Back alignment and domain information

>TIGR00277 HDIG uncharacterized domain HDIG	Back alignment and domain information

>smart00471 HDc Metal dependent phosphohydrolases with conserved 'HD' motif	Back alignment and domain information

>TIGR00488 putative HD superfamily hydrolase of NAD metabolism	Back alignment and domain information

>PRK00106 hypothetical protein; Provisional	Back alignment and domain information

>PF01966 HD: HD domain; InterPro: IPR006674 This domain is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity []	Back alignment and domain information

>TIGR03319 YmdA_YtgF conserved hypothetical protein YmdA/YtgF	Back alignment and domain information

>COG4341 Predicted HD phosphohydrolase [General function prediction only]	Back alignment and domain information

>TIGR01596 cas3_HD CRISPR-associated endonuclease Cas3-HD	Back alignment and domain information

>TIGR00295 conserved hypothetical protein TIGR00295	Back alignment and domain information

>COG2316 Predicted hydrolase (HD superfamily) [General function prediction only]	Back alignment and domain information

>PF08668 HDOD: HDOD domain; InterPro: IPR013976 This domain is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity	Back alignment and domain information

>cd00077 HDc Metal dependent phosphohydrolases with conserved 'HD' motif	Back alignment and domain information

>PRK12705 hypothetical protein; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		316
2huo_A		289	Crystal Structure Of Mouse Myo-Inositol Oxygenase I		6e-70
2ibn_A		246	Crystal Structure Of Human Myo-Inositol Oxygenase (		2e-57
2ibn_B		240	Crystal Structure Of Human Myo-Inositol Oxygenase (		4e-55

>pdb|2HUO|A Chain A, Crystal Structure Of Mouse Myo-Inositol Oxygenase In Complex With Substrate Length = 289

Back alignment and structure

Iteration: 1

Score = 260 bits (665), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 127/273 (46%), Positives = 177/273 (64%), Gaps = 5/273 (1%) Query: 45 VAPEINSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWE 104 V PE+ +FR+Y + + V Y+L H +QT DFV + R +Y +M+I E Sbjct: 21 VDPEMAKSKDSFRNYTSGPLLDR-VFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIME 79 Query: 105 CCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFG 164 +L+++VDESDPD+D P H Q+AE IRK +PD+DW HL L+HDLGK++ L Sbjct: 80 AVGMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKIMAL---W 136 Query: 165 GLPQWAVVGDTFPLGCAFDESNVH-HKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISW 223 G PQWAVVGDTFP+GC S V F++NPD +P Y+T+ G+Y CGL+NV++SW Sbjct: 137 GEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLENVLMSW 196 Query: 224 GHDDYMYLVAKENGTTLPSAGLFIVRYHSFYPLHKEGAYAHLMNEEDKENLKWLQVFNKY 283 GHD+Y+Y + K N +LPS +++R+HSFYP H G Y L +++D + L W+Q FNK+ Sbjct: 197 GHDEYLYQMMKFNKFSLPSEAFYMIRFHSFYPWHTGGDYRQLCSQQDLDMLPWVQEFNKF 256 Query: 284 DLYSKSKVLVDVEKVKPYYLSLIEKYFPAKLRW 316 DLY+K L DVE ++PYY LI+KY P L W Sbjct: 257 DLYTKCPDLPDVESLRPYYQGLIDKYCPGTLSW 289

PyMOL of 2huo

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		316
2huo_A		289	Inositol oxygenase; protein-substrate complex, HD	1e-129
2ibn_A		250	Inositol oxygenase; reductase, DIIRON, structural	1e-128
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>2huo_A Inositol oxygenase; protein-substrate complex, HD domain fold, oxidoreductase; HET: INS; 2.00A {Mus musculus} SCOP: a.211.1.4 PDB: 3bxd_A* Length = 289	Back alignment and structure

 Score =  368 bits (946), Expect = e-129
 Identities = 126/273 (46%), Positives = 174/273 (63%), Gaps = 5/273 (1%)

Query: 45  VAPEINSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWE 104
           V PE+     +FR+Y         V   Y+L H +QT DFV + R +Y      +M+I E
Sbjct: 21  VDPEMAKSKDSFRNYT-SGPLLDRVFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIME 79

Query: 105 CCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFG 164
              +L+++VDESDPD+D P   H  Q+AE IRK +PD+DW HL  L+HDLGK++      
Sbjct: 80  AVGMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKIM---ALW 136

Query: 165 GLPQWAVVGDTFPLGCAFDESNVH-HKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISW 223
           G PQWAVVGDTFP+GC    S V     F++NPD  +P Y+T+ G+Y   CGL+NV++SW
Sbjct: 137 GEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLENVLMSW 196

Query: 224 GHDDYMYLVAKENGTTLPSAGLFIVRYHSFYPLHKEGAYAHLMNEEDKENLKWLQVFNKY 283
           GHD+Y+Y + K N  +LPS   +++R+HSFYP H  G Y  L +++D + L W+Q FNK+
Sbjct: 197 GHDEYLYQMMKFNKFSLPSEAFYMIRFHSFYPWHTGGDYRQLCSQQDLDMLPWVQEFNKF 256

Query: 284 DLYSKSKVLVDVEKVKPYYLSLIEKYFPAKLRW 316
           DLY+K   L DVE ++PYY  LI+KY P  L W
Sbjct: 257 DLYTKCPDLPDVESLRPYYQGLIDKYCPGTLSW 289

PyMOL of 2huo

>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4 Length = 250	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		316
2huo_A		289	Inositol oxygenase; protein-substrate complex, HD	100.0
2ibn_A		250	Inositol oxygenase; reductase, DIIRON, structural	100.0
2o08_A		188	BH1327 protein; putative HD superfamily hydrolase,	94.13
3ccg_A		190	HD superfamily hydrolase; NP_347894.1, HD domain,	94.07
2ogi_A		196	Hypothetical protein SAG1661; structural genomics,	93.89
3hc1_A		305	Uncharacterized HDOD domain protein; HDOD domain p	90.8
3i7a_A		281	Putative metal-dependent phosphohydrolase; YP_9268	88.0
3ljx_A		288	MMOQ response regulator; structural genomics, PSI-	86.87
3b57_A		209	LIN1889 protein; Q92AN1, X-RAY, NESG, structural g	85.81
2qgs_A		225	Protein Se1688; alpha-helical protein, structural	85.24
3dto_A		223	BH2835 protein; all alpha-helical protein, structu	85.13
3djb_A		223	Hydrolase, HD family; all alpha-helical protein.,	84.93
3m1t_A		275	Putative phosphohydrolase; structural genomics, jo	82.99
2pjq_A		231	Uncharacterized protein LP_2664; LPR71, NESG, stru	82.77

>2huo_A Inositol oxygenase; protein-substrate complex, HD domain fold, oxidoreductase; HET: INS; 2.00A {Mus musculus} SCOP: a.211.1.4 PDB: 3bxd_A*	Back alignment and structure

Probab=100.00  E-value=4e-146  Score=1020.06  Aligned_cols=269  Identities=46%  Similarity=0.914  Sum_probs=252.5

Q ss_pred             CCCCCcc----cCccccCCccchhhhhHHHHHHHHHhhhhchHHHHHHHHHHHccCCCccccHHHHHHHHHhhhCCCCCC
Q 021203           44 FVAPEIN----SFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPD  119 (316)
Q Consensus        44 f~~p~~~----~~~~~fR~Y~~~~~r~~~V~~fYr~~H~~QTvdfv~~~~~~~~~~~~~~MsI~EA~e~Ln~lvDeSDPD  119 (316)
                      |..|+.+    +++++||||+. +.+++||++|||+||++|||+||++||++|++++|++|||||||++||+||||||||
T Consensus        16 ~~~p~~~~~~~k~~~~FR~Y~~-~~~~~~V~~fYr~~H~~QTvdfv~~~~~~~~~~~~~~MtIweA~e~Ln~LvDeSDPD   94 (289)
T 2huo_A           16 VYRPDVDPEMAKSKDSFRNYTS-GPLLDRVFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIMEAVGMLDDLVDESDPD   94 (289)
T ss_dssp             ----------------CCCSSS-CSSHHHHHHHHHHHHHHCCHHHHHHHHHHHTTCCSCEECHHHHHHHGGGCCCSSCTT
T ss_pred             eeccCccccccccHHHhhCccc-chhHHHHHHHHHHHhhhhHHHHHHHHHHHHhccCCCCCcHHHHHHHHHHhcCCcCCc
Confidence            5556655    77889999997 567899999999999999999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHhcCCCCCchhhhhhhhcccchhcccCCCCCCCceEeccceeeccccCCCccccc-ccccCCCC
Q 021203          120 LDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLGCAFDESNVHHK-YFKENPDS  198 (316)
Q Consensus       120 ~dl~qi~H~lQTAEaiR~d~p~pdW~qLtGLiHDLGKvl~~~~fg~~pQW~VVGDTfPvGC~f~~~iv~~~-~F~~NPD~  198 (316)
                      +|+|||+||||||||||+|||..||||||||||||||||++  | ++|||+||||||||||+|+++|||++ ||++|||.
T Consensus        95 ~dl~qi~H~lQTAEaiR~d~pp~dW~qLtGLiHDLGKvl~~--~-~epQW~vvGDTfpVGC~f~~~iv~~e~~F~~NpD~  171 (289)
T 2huo_A           95 VDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKIMAL--W-GEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDL  171 (289)
T ss_dssp             CCSCHHHHHHHHHHHHHHHCTTCHHHHHHHHHTTGGGGGGG--G-TCCGGGTSSCCCBSSSCCCTTSTTTTTSCTTCGGG
T ss_pred             cchhHHHHHHHHHHHHHHhCCCcchheeeeecccchhhhhh--c-CCCceeeecCcceeccccccccccchhhccCCCCC
Confidence            99999999999999999999877999999999999999987  4 69999999999999999999999999 99999999


Q ss_pred             CCCCCCCCCCcccCCCCccccccccCchhHHHHHHHhcCCCCCcchhhhhhhccccccccCCcccccCChhhHHHHHHHH
Q 021203          199 NNPAYNTKNGIYTEGCGLDNVMISWGHDDYMYLVAKENGTTLPSAGLFIVRYHSFYPLHKEGAYAHLMNEEDKENLKWLQ  278 (316)
Q Consensus       199 ~~p~YnTk~GiY~p~CGLdnV~mSWGHDEYlY~Vlk~n~stLP~eaL~mIRyHSFYpwH~~gaY~hL~ne~D~~~l~wV~  278 (316)
                      +||+||||||||+||||||||+||||||||||+|||+|+||||+|||+|||||||||||++|||+||||++|.+||+||+
T Consensus       172 ~~p~YnTk~GiY~p~CGLdnV~mSWGHDEYlY~Vlk~n~stLP~eaL~mIRyHSFYpwH~~gaY~~L~ne~D~~~l~wv~  251 (289)
T 2huo_A          172 QDPRYSTELGMYQPHCGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMIRFHSFYPWHTGGDYRQLCSQQDLDMLPWVQ  251 (289)
T ss_dssp             GSTTTSSSSTTCCTTCCGGGSCBCSSHHHHHHHHHHHTTCCCCHHHHHHHHHTTCHHHHTSSCCTTTCCHHHHHHHHHHH
T ss_pred             CCccccccCCcccCCCCccceeecccchHHHHHHHHcCCCCCCHHHHHHHHHhccCcccccccHhhhcChhHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCccccccCCCCCChhhhhhchHHHHHHHcCCCCCC
Q 021203          279 VFNKYDLYSKSKVLVDVEKVKPYYLSLIEKYFPAKLRW  316 (316)
Q Consensus       279 ~Fn~yDLYSKs~~~pdve~lkPYY~~LIdKY~P~~L~W  316 (316)
                      +||||||||||+++||||+|||||++|||||||++|+|
T Consensus       252 ~Fn~yDLYSKs~~~pdve~lkpYY~~LidKY~P~~l~W  289 (289)
T 2huo_A          252 EFNKFDLYTKCPDLPDVESLRPYYQGLIDKYCPGTLSW  289 (289)
T ss_dssp             HHHHHHHHTCCSSCCCHHHHHHHHHHHHHHHSCSCEEC
T ss_pred             HhCcccccccCCCCCCHHHHHHHHHHHHHHHCCcccCC
Confidence            99999999999999999999999999999999999999

PyMOL of 2huo

>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4	Back alignment and structure

>2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans}	Back alignment and structure

>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824}	Back alignment and structure

>2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V}	Back alignment and structure

>3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, STRU genomics, joint center for structural genomics; 1.90A {Geobacter sulfurreducens}	Back alignment and structure

>3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, STRU genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B}	Back alignment and structure

>3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus} PDB: 3ljv_A 3p3q_A	Back alignment and structure

>3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1	Back alignment and structure

>2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein S initiative, northeast structural genomics consortium; 2.00A {Staphylococcus epidermidis} SCOP: a.211.1.1	Back alignment and structure

>3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1	Back alignment and structure

>3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1	Back alignment and structure

>3m1t_A Putative phosphohydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE GOL; 1.62A {Shewanella amazonensis} SCOP: a.211.1.0	Back alignment and structure

>2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		316
d2ibna1		249	a.211.1.4 (A:37-285) Myo-inositol oxygenase MioX {	1e-138

>d2ibna1 a.211.1.4 (A:37-285) Myo-inositol oxygenase MioX {Human (Homo sapiens) [TaxId: 9606]} Length = 249	Back information, alignment and structure


class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: MioX-like
domain: Myo-inositol oxygenase MioX
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  389 bits (1000), Expect = e-138
 Identities = 119/250 (47%), Positives = 161/250 (64%), Gaps = 4/250 (1%)

Query: 68  SVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPDLDEPQIQH 127
            V   Y+L H +QT DFV+    ++      +M++ E  +LL+ +VDESDPD+D P   H
Sbjct: 3   RVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFH 62

Query: 128 LLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLGCAFDESNV 187
             Q+AE IRK +PD+DW HL  L+HDLGKVL      G PQWAVVGDTFP+GC    S V
Sbjct: 63  AFQTAEGIRKAHPDKDWFHLVGLLHDLGKVL---ALFGEPQWAVVGDTFPVGCRPQASVV 119

Query: 188 H-HKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGHDDYMYLVAKENGTTLPSAGLF 246
                F++NPD  +P Y+T+ G+Y   CGLD V++SWGHD+YMY V K N  +LP    +
Sbjct: 120 FCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFY 179

Query: 247 IVRYHSFYPLHKEGAYAHLMNEEDKENLKWLQVFNKYDLYSKSKVLVDVEKVKPYYLSLI 306
           ++R+HSFYP H    Y  L +++D   L W++ FNK+DLY+K   L DV+K++PYY  LI
Sbjct: 180 MIRFHSFYPWHTGRDYQQLCSQQDLAMLPWVREFNKFDLYTKCPDLPDVDKLRPYYQGLI 239

Query: 307 EKYFPAKLRW 316
           +KY P  L W
Sbjct: 240 DKYCPGILSW 249

PyMOL of d2ibna1

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		316
d2ibna1		249	Myo-inositol oxygenase MioX {Human (Homo sapiens)	100.0
d3b57a1		201	Uncharacterized protein Lin1889 {Listeria innocua	81.53

>d2ibna1 a.211.1.4 (A:37-285) Myo-inositol oxygenase MioX {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: MioX-like
domain: Myo-inositol oxygenase MioX
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-137  Score=945.39  Aligned_cols=247  Identities=49%  Similarity=0.941  Sum_probs=235.1

Q ss_pred             HHHHHHHHHhhhhchHHHHHHHHHHHccCCCccccHHHHHHHHHhhhCCCCCCCCchHHHHHHHHHHHHHhcCCCCCchh
Q 021203           67 KSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLH  146 (316)
Q Consensus        67 ~~V~~fYr~~H~~QTvdfv~~~~~~~~~~~~~~MsI~EA~e~Ln~lvDeSDPD~dl~qi~H~lQTAEaiR~d~p~pdW~q  146 (316)
                      +||++|||+||++||||||++||++|+++++++||||||+++||+|||+||||+|+|||+||||||||||++||+|||||
T Consensus         2 drV~~~Y~~~h~~QT~dfv~~~~~~~~~~~~~~mti~eale~Ln~lvD~SDPD~~lpn~~H~~QTAE~iR~~~~~~dW~q   81 (249)
T d2ibna1           2 DRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFH   81 (249)
T ss_dssp             HHHHHHHHHHHHHCCHHHHHHHHHHHTTCCSCEECHHHHHHHGGGCCCTTC---CCCHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred             chHHHHHHHHHHhhHHHHHHHHHHHHhcCCcceeEHHHHHHHHHhhcCCCCCCCCchhHHHHHHHHHHHHHhCCCcchHH
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhcccchhcccCCCCCCCceEeccceeeccccCCCccccc-ccccCCCCCCCCCCCCCCcccCCCCccccccccCc
Q 021203          147 LTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLGCAFDESNVHHK-YFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGH  225 (316)
Q Consensus       147 LtGLiHDLGKvl~~~~fg~~pQW~VVGDTfPvGC~f~~~iv~~~-~F~~NPD~~~p~YnTk~GiY~p~CGLdnV~mSWGH  225 (316)
                      ||||||||||||++  || +|||+||||||||||+|+++|||++ +|++|||..||+|||++|||+||||||||+|||||
T Consensus        82 L~GLiHDLGKvl~~--~g-e~qW~vVGDTf~vGC~~~~~iv~~e~~f~~NpD~~~~~yntk~GiY~~~CGLdNv~~SWGH  158 (249)
T d2ibna1          82 LVGLLHDLGKVLAL--FG-EPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVLMSWGH  158 (249)
T ss_dssp             HHHHHTTGGGHHHH--TT-CCGGGTSSCCCBSSSCCCTTSTTHHHHCTTCGGGGCTTTSSSSTTCCTTCCGGGSCBCCSH
T ss_pred             hhhhhhhhHHHhHh--cC-CCceeeecccceecccCCccccccccccccCccccCCccCCcccccCCCCCccceeeeccc
Confidence            99999999999988  65 8999999999999999999999988 79999999999999999999999999999999999


Q ss_pred             hhHHHHHHHhcCCCCCcchhhhhhhccccccccCCcccccCChhhHHHHHHHHHcCCccccccCCCCCChhhhhhchHHH
Q 021203          226 DDYMYLVAKENGTTLPSAGLFIVRYHSFYPLHKEGAYAHLMNEEDKENLKWLQVFNKYDLYSKSKVLVDVEKVKPYYLSL  305 (316)
Q Consensus       226 DEYlY~Vlk~n~stLP~eaL~mIRyHSFYpwH~~gaY~hL~ne~D~~~l~wV~~Fn~yDLYSKs~~~pdve~lkPYY~~L  305 (316)
                      |||||+|||+|+++||+|||+|||||||||||++|+|+||||++|.+||+||++|||||||||+++.||+++|||||++|
T Consensus       159 DEYLY~Vlk~N~~~LP~eal~mIRyHSfYpwH~~~~Y~~l~n~~D~~ml~~V~~FN~yDLYSK~d~~pd~~~lkpYY~~L  238 (249)
T d2ibna1         159 DEYMYQVMKFNKFSLPPEAFYMIRFHSFYPWHTGRDYQQLCSQQDLAMLPWVREFNKFDLYTKCPDLPDVDKLRPYYQGL  238 (249)
T ss_dssp             HHHHHHHHHHHTCCCCHHHHHHHHHTTCHHHHTTCCCTTTCCHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHH
T ss_pred             hHHHHHHHhcCCCcCCHHHHHHHHhhccccccCcchHHHHhChhHHHHHHHHHhcCccccccCCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCC
Q 021203          306 IEKYFPAKLRW  316 (316)
Q Consensus       306 IdKY~P~~L~W  316 (316)
                      ||||||++|+|
T Consensus       239 idKY~pg~L~W  249 (249)
T d2ibna1         239 IDKYCPGILSW  249 (249)
T ss_dssp             HHHHSCSCEEC
T ss_pred             HHHHCCCCcCC
Confidence            99999999999

PyMOL of d2ibna1

>d3b57a1 a.211.1.1 (A:1-201) Uncharacterized protein Lin1889 {Listeria innocua [TaxId: 1642]}	Back information, alignment and structure