Citrus Sinensis ID: 021258

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-----
Protein Sequence
MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNGASSLMKGSSPRGGEP
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcHHHHHHHHHHHccEEcccHHHHHHHHHHHHcEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mrvpygadneyFKYSLFLVFCNRLMTSAVSAGTLIasrkaidpvapVYKYCLVSMSNILTTTCQYEAlkyvsfpvqtlakCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIfilfpsgadlspyskgrentVWGVSLMVGYlgfdgftstfqdklfkgydmeiHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCvwfrhplsweqCIGSIIVFGALYTRSFFKkvsekprpsehpmenmhngasslmkgssprggep
Flexible Loop (DISEMBL)
mrvpygadnEYFKYSLFLVFCNRLMTSAVSAGTliasrkaidpVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSekprpsehpmenmhngasslmkgssprggep
Low Complexity Region (SEG)
MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNGASSLMKGSSPRGGEP
Disordered region (IsUnstruct)
*****GADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK**********************************
Disordered Region (DISOPRED)
**VPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI*****************TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR**************************************
Disordered Region (DISEMBL)
MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK*************NMHNGAS*************
Disordered Region (DISPRO)
********NEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS**********RENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV********************************
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNGASSLMKGSSPRGGEP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	315	2.2.26 [Sep-21-2011]
Q6NMB6	344	UDP-galactose/UDP-glucose	yes	no	0.930	0.851	0.793	1e-141
Q6NM25	347	UDP-galactose/UDP-glucose	no	no	0.926	0.841	0.797	1e-137
Q55DM5	359	Adenosine 3'-phospho 5'-p	yes	no	0.866	0.760	0.480	2e-65
Q91ZN5	431	Adenosine 3'-phospho 5'-p	no	no	0.911	0.665	0.39	1e-45
Q8TB61	432	Adenosine 3'-phospho 5'-p	yes	no	0.923	0.673	0.373	1e-43
Q5R9A1	432	Adenosine 3'-phospho 5'-p	yes	no	0.923	0.673	0.373	1e-43
Q9VEI3	465	Adenosine 3'-phospho 5'-p	yes	no	0.892	0.604	0.366	7e-41
Q8MXJ9	425	Adenosine 3'-phospho 5'-p	yes	no	0.873	0.647	0.369	1e-37
Q6C4X5	365	UDP-galactose transporter	yes	no	0.879	0.758	0.290	5e-28
Q8AXS6	323	Solute carrier family 35	yes	no	0.873	0.851	0.304	1e-22

>sp|Q6NMB6|UTR5B_ARATH UDP-galactose/UDP-glucose transporter 5B OS=Arabidopsis thaliana GN=At5g59740 PE=2 SV=1

 Score =  501 bits (1290), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 235/296 (79%), Positives = 265/296 (89%), Gaps = 3/296 (1%)

Query: 1   MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
           MRVPYG + E+FK+SLFLVFCNRL TSAVSAG L+AS+K +DPVAPVYKYCL+S++NILT
Sbjct: 41  MRVPYGVNKEFFKHSLFLVFCNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILT 100

Query: 61  TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
           TTCQYEALKYVSFPVQTLAKCAKMIPVM+WGTLIMQK+YKG+DY +A LVTLGCS+FILF
Sbjct: 101 TTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILF 160

Query: 121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
           P+G D+SPY+KGRENTVWGVSLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSC
Sbjct: 161 PAGDDVSPYNKGRENTVWGVSLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSC 220

Query: 181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
           VLS +GLIL+GHL  A+DFV  H DC  D+ALLSTVAT SQFFISYTIRTFGALTFA IM
Sbjct: 221 VLSFTGLILQGHLLPAVDFVSLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIM 280

Query: 241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF--KKVSE-KPRPSEHP 293
           TTRQL SI+LSC+WF HPLSWEQCIGS+IVFG+LY ++    KK S+ +P P E P
Sbjct: 281 TTRQLASIMLSCIWFSHPLSWEQCIGSVIVFGSLYAKNLLNNKKNSQTQPPPPELP 336

Sugar transporter involved in the transport of nucleotide-sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum.
Arabidopsis thaliana (taxid: 3702)

>sp|Q6NM25|UTR5_ARATH UDP-galactose/UDP-glucose transporter 5 OS=Arabidopsis thaliana GN=UTR5 PE=2 SV=1

 Score =  489 bits (1258), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 233/292 (79%), Positives = 264/292 (90%)

Query: 1   MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
           MRVPYG   EYFK+SLFLVFCNRL TSAVSA  L+AS+K +DPVAPVYKYCL+S++NILT
Sbjct: 42  MRVPYGLKKEYFKHSLFLVFCNRLTTSAVSAAALLASKKVLDPVAPVYKYCLISVTNILT 101

Query: 61  TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
           TTCQYEALKYVSFPVQTLAKCAKMIPVM+WGTLIMQK+Y+G+DY +A LVTLGCS+FILF
Sbjct: 102 TTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKYRGFDYLVAFLVTLGCSVFILF 161

Query: 121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
           P+G D+SPY+KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTT+CS 
Sbjct: 162 PAGDDISPYNKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTICSS 221

Query: 181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
           +LS +GLIL+GHL  A+DFV  H DC FD+ALLSTVAT SQFFISYTIRTFGALTFA IM
Sbjct: 222 ILSFTGLILQGHLLPAVDFVSRHRDCLFDIALLSTVATASQFFISYTIRTFGALTFAAIM 281

Query: 241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEH 292
           TTRQL SI+LSC+WF HPLSWEQCIGS+IVFG+LY ++F KK SEKP  ++ 
Sbjct: 282 TTRQLASIMLSCIWFSHPLSWEQCIGSVIVFGSLYAKTFVKKKSEKPPAAQE 333

Sugar transporter involved in the transport of nucleotide-sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum.

Arabidopsis thaliana (taxid: 3702)

>sp|Q55DM5|S35B2_DICDI Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Dictyostelium discoideum GN=slc35b2 PE=3 SV=1

 Score =  249 bits (636), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 135/281 (48%), Positives = 180/281 (64%), Gaps = 8/281 (2%)

Query: 1   MRVPY-GAD--NEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSN 57
           M VPY  AD   EYF  S FLV  NR+  + ++   ++   +++  VAP++KY  V++SN
Sbjct: 51  MVVPYKNADGSEEYFTDSTFLVLSNRVFAALMAIVIVLKRGESLKNVAPLHKYVGVALSN 110

Query: 58  ILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF 117
              T CQYEALKYV+FP QTL KC KM+PVM+ GT I  K+Y   DY +AL +T GC IF
Sbjct: 111 FCATWCQYEALKYVNFPTQTLGKCGKMLPVMLVGTFISGKKYGLKDYSIALTITTGCMIF 170

Query: 118 ILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTL 177
            L    ++         NT +G+ LM  Y+ FD FTSTFQ+K+FKGY M  ++Q+ Y   
Sbjct: 171 FLTGKISN-----NESSNTSYGIILMALYMFFDSFTSTFQEKMFKGYTMSTYDQMIYVNG 225

Query: 178 CSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFA 237
           CS ++S+  LIL G LF AI+F+  H   FFD  +LS  A   Q  I YTI+ FGAL F+
Sbjct: 226 CSSIISVFILILNGRLFPAIEFISTHNGVFFDSTMLSASAGLGQMVIYYTIKEFGALVFS 285

Query: 238 TIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 278
           TIM TRQ+VSI+LS + + HPLS  Q IG+++VFG LY +S
Sbjct: 286 TIMVTRQMVSIILSTLIYLHPLSNTQWIGALLVFGTLYYKS 326

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Dictyostelium discoideum (taxid: 44689)

>sp|Q91ZN5|S35B2_MOUSE Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Mus musculus GN=Slc35b2 PE=2 SV=1

 Score =  183 bits (465), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/300 (39%), Positives = 173/300 (57%), Gaps = 13/300 (4%)

Query: 5   YGAD----NEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
           YGA      E+F  S FLV  NR++ + V AG     RK     AP+Y+Y   S+SN+L+
Sbjct: 138 YGATATSPGEHFTDSQFLVLMNRVL-ALVVAGLYCVLRKQPRHGAPMYRYSFASLSNVLS 196

Query: 61  TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
           + CQYEALK+VSFP Q LAK +K+IPVM+ G L+ ++ Y+ ++Y  A L+++G S+F+L 
Sbjct: 197 SWCQYEALKFVSFPTQVLAKASKVIPVMMMGKLVSRRSYEHWEYLTAGLISIGVSMFLL- 255

Query: 121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
            SG +  P S     T+ G+ L+ GY+ FD FTS +QD LF  Y M     +F   L SC
Sbjct: 256 SSGPE--PRSS-PATTLSGLVLLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSC 311

Query: 181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
           + ++  L+ +G L     F+  H +      LLS  +   Q FI YTI  FGA  F  IM
Sbjct: 312 LFTVGSLLEQGALLEGARFMGRHSEFALHALLLSICSAFGQLFIFYTIGQFGAAVFTIIM 371

Query: 241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF---KKVSEKPRPSEHPMENM 297
           T RQ ++I+LSC+ + H ++    +G  +VF AL  R +    K+  +K  P+E P++ +
Sbjct: 372 TLRQAIAILLSCLLYGHTVTVVGGLGVAVVFTALLLRVYARGRKQRGKKAVPTEPPVQKV 431

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Mus musculus (taxid: 10090)

>sp|Q8TB61|S35B2_HUMAN Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Homo sapiens GN=SLC35B2 PE=1 SV=1

 Score =  177 bits (449), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/305 (37%), Positives = 170/305 (55%), Gaps = 14/305 (4%)

Query: 1   MRVPYGAD----NEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMS 56
           M   YGA      E F  S FLV  NR++   V+  + +  ++     AP+Y+Y   S+S
Sbjct: 134 MTRSYGATATSPGERFTDSQFLVLMNRVLALIVAGLSCVLCKQPRHG-APMYRYSFASLS 192

Query: 57  NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSI 116
           N+L++ CQYEALK+VSFP Q LAK +K+IPVM+ G L+ ++ Y+ ++Y  A L+++G S+
Sbjct: 193 NVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLMGKLVSRRSYEHWEYLTATLISIGVSM 252

Query: 117 FILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTT 176
           F+L  SG +  P S     T+ G+ L+ GY+ FD FTS +QD LF  Y M     +F   
Sbjct: 253 FLL-SSGPE--PRSS-PATTLSGLILLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVN 307

Query: 177 LCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTF 236
             SC+ ++  L+ +G L     F+  H +      LLS  +   Q FI YTI  FGA  F
Sbjct: 308 FFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIGQFGAAVF 367

Query: 237 ATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGAL----YTRSFFKKVSEKPRPSEH 292
             IMT RQ  +I+LSC+ + H ++    +G  +VF AL    Y R   K+  +K  P E 
Sbjct: 368 TIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGKKAVPVES 427

Query: 293 PMENM 297
           P++ +
Sbjct: 428 PVQKV 432

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. May indirectly participate in activation of the NF-kappa-B and MAPK pathways.

Homo sapiens (taxid: 9606)

>sp|Q5R9A1|S35B2_PONAB Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Pongo abelii GN=SLC35B2 PE=2 SV=2

 Score =  177 bits (449), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/305 (37%), Positives = 170/305 (55%), Gaps = 14/305 (4%)

Query: 1   MRVPYGAD----NEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMS 56
           M   YGA      E F  S FLV  NR++   V+  + +  ++     AP+Y+Y   S+S
Sbjct: 134 MTRSYGATATSPGERFTDSQFLVLMNRVLALIVAGLSCVLCKQPRHG-APMYRYSFASLS 192

Query: 57  NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSI 116
           N+L++ CQYEALK+VSFP Q LAK +K+IPVM+ G L+ ++ Y+ ++Y  A L+++G S+
Sbjct: 193 NVLSSWCQYEALKFVSFPTQVLAKVSKVIPVMLMGKLVSRRSYEHWEYLTATLISIGVSM 252

Query: 117 FILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTT 176
           F+L  SG +  P S     T+ G+ L+ GY+ FD FTS +QD LF  Y M     +F   
Sbjct: 253 FLL-SSGPE--PRSS-PATTLSGLILLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVN 307

Query: 177 LCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTF 236
             SC+ ++  L+ +G L     F+  H +      LLS  +   Q FI YTI  FGA  F
Sbjct: 308 FFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIGQFGAAVF 367

Query: 237 ATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGAL----YTRSFFKKVSEKPRPSEH 292
             IMT RQ  +I+LSC+ + H ++    +G  +VF AL    Y R   K+  +K  P E 
Sbjct: 368 TIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGKKAVPVES 427

Query: 293 PMENM 297
           P++ +
Sbjct: 428 PVQKV 432

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Pongo abelii (taxid: 9601)

>sp|Q9VEI3|S35B2_DROME Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Drosophila melanogaster GN=sll PE=1 SV=1

 Score =  167 bits (424), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 161/292 (55%), Gaps = 11/292 (3%)

Query: 5   YGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQ 64
           +  ++  FK S FLVF NRL+   V+   L      +   AP+YKY   S SNI++   Q
Sbjct: 174 FTGESAKFKDSQFLVFSNRLLAFLVALAYLQWQPSPVRHRAPLYKYSYASFSNIMSAWFQ 233

Query: 65  YEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGA 124
           YEALK+V+FP Q LAK  K+IPVM+ G ++ + +Y+ Y+Y  ALL++LG    I F SG+
Sbjct: 234 YEALKFVNFPTQVLAKSCKIIPVMLMGKIMSKAKYESYEYVTALLISLG---MIFFMSGS 290

Query: 125 DLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSL 184
             S  + G   T+ G+ L+  Y+ FD FT+ +Q  LFK Y M     +    L S + + 
Sbjct: 291 SDSSKASG-VTTLTGIFLLSMYMVFDSFTANWQGSLFKSYGMTPLQMMCGVNLFSSIFTG 349

Query: 185 SGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQ 244
           + L ++G    ++ F   H    FD+ +LS  +   Q FI +TI  FG + F  IMT RQ
Sbjct: 350 ASLSMQGGFMDSLAFATEHPKFVFDMVVLSVCSAVGQLFIYHTIDVFGPVVFTIIMTLRQ 409

Query: 245 LVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF-------FKKVSEKPRP 289
            V+I+LSC  ++H +S     G +IVF A++ R +        +K +E  +P
Sbjct: 410 AVAIMLSCFIYQHSISLLGIFGVLIVFVAIFLRVYCTQRLRAIRKRAEANKP 461

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Required for the dorsoventral patterning, suggesting that it mediates the transport of the sulfate donor required for the sulfotransferase activity of pip (pipe).

Drosophila melanogaster (taxid: 7227)

>sp|Q8MXJ9|S35B2_CAEEL Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Caenorhabditis elegans GN=pst-1 PE=3 SV=4

 Score =  157 bits (396), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/292 (36%), Positives = 153/292 (52%), Gaps = 17/292 (5%)

Query: 9   NEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDP-VAPVYKYCLVSMSNILTTTCQYEA 67
            + F  + FL+FCNR++   +S   L        P V P+Y +   S SN +++ CQYEA
Sbjct: 141 EDKFGETQFLIFCNRIVALVLSLMILAKDWTKQPPHVPPLYVHSYTSFSNTISSWCQYEA 200

Query: 68  LKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLS 127
           LKYVSFP QT+ K +K++  M+ G L+  +RY  ++Y        GC   I F +   L 
Sbjct: 201 LKYVSFPTQTICKASKVVVTMLMGRLVRGQRYSWFEY--------GCGCTIAFGASLFLL 252

Query: 128 PYS-KGRENTVW-----GVSLMVGYLGFDGFTSTFQDKLFKGY-DMEIHNQIFYTTLCSC 180
             S KG  +T+      G+ LM GYL FD FT  +Q  LF     +  +  +F     S 
Sbjct: 253 SSSSKGAGSTITYTSFSGMILMAGYLLFDAFTLNWQKALFDTKPKVSKYQMMFGVNFFSA 312

Query: 181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
           +L    LI +G L+ +I F   H+D   DV LLS      Q FI  TI  FG + FA IM
Sbjct: 313 ILCAVSLIEQGTLWSSIKFGAEHVDFSRDVFLLSLSGAIGQIFIYSTIERFGPIVFAVIM 372

Query: 241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEH 292
           T RQ++SIVLS + + H L++   IG +IVF A++     KK S+K R  + 
Sbjct: 373 TIRQMLSIVLSTIMYGHELTFLAAIGFMIVFAAIFV-DIHKKYSDKSRGPQR 423

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Caenorhabditis elegans (taxid: 6239)

>sp|Q6C4X5|HUT1_YARLI UDP-galactose transporter homolog 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=HUT1 PE=3 SV=1

 Score =  125 bits (313), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 143/293 (48%), Gaps = 16/293 (5%)

Query: 4   PYGADNEYFKYSLFLVFCNRLMTSAV------------SAGTLIASRKAIDPVAPVYKYC 51
           PYG DN+ F+ SL +      + +AV            +A  L  +    D +  + +  
Sbjct: 70  PYGPDNKIFRASLVINTVQSFLAAAVGYAYLQYKQSRRAAKGLKKNTTVFDSMYTLKQLS 129

Query: 52  LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVT 111
           LV++S  L +   Y ALKYV +    LAK  K+IP+M     + ++++  Y Y + +LVT
Sbjct: 130 LVALSQSLASPLSYTALKYVDYLTSILAKSCKLIPLMALQVTLYRRKFPAYKYAVVVLVT 189

Query: 112 LGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLF-KGYDMEIHN 170
           +G S+F +F + A       G E+ ++G+ L+   +  DG T++ QD++F K  D+   +
Sbjct: 190 IGVSMFTIFHA-APKKASGAGSEHQLYGLGLLGISMLLDGLTNSTQDQIFRKNADITGPH 248

Query: 171 QIFYTTLCSCVLSLSGLIL--EGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTI 228
            +    L + V +   L+      L  AI F+  H +   D+ L        Q FI  T+
Sbjct: 249 VMCGLNLLTGVFTTVSLLTFSRPQLDTAIAFIRLHPEIMRDIVLFGLCGAVGQVFIFQTL 308

Query: 229 RTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK 281
             FG++   T+  TR++ S++LS VWF H L+  Q  G   VFG +   ++ K
Sbjct: 309 EKFGSVVLVTVNVTRKMFSMLLSVVWFNHRLTLGQWAGVAAVFGGIGFEAWMK 361

May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|Q8AXS6|S35B1_XENTR Solute carrier family 35 member B1 OS=Xenopus tropicalis GN=slc35b1 PE=2 SV=2

 Score =  107 bits (267), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 145/286 (50%), Gaps = 11/286 (3%)

Query: 6   GADNEYFKYSLFLVFCNRLMTSAVSAGTLIA---SRKAIDPVAPVYKYCLVSMSNILTTT 62
           G   E F+++L LVF  + + +A+ A  LI    S K     + +Y  C  S+S +    
Sbjct: 43  GEKQEKFRFALSLVFV-QCIVNALFAKLLIQFFDSGKTDRTQSWLYAAC--SLSYLGAMV 99

Query: 63  CQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS 122
               AL++V++P Q L K  K IPVM+ G  +++K+Y    Y   LL+ LG ++F+  P 
Sbjct: 100 SSNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLRKKYPLSKYLCVLLIVLGVALFMYKPK 159

Query: 123 GADLSPYSKGRENTV-WGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCV 181
                  S G E+T  +G  L++  L  DG T   QD +   +    ++ + Y  L S +
Sbjct: 160 NTG----SGGDEHTFGYGELLLLLSLTLDGLTGVSQDHMRAHFQTGSNHMMLYINLWSSL 215

Query: 182 LSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMT 241
              +G++  G L+  + F   +    +++ L S  +   Q FI  T+  FG LT + I T
Sbjct: 216 FLGAGIVFTGELWDFLSFTERYPSIVYNIMLFSLTSALGQTFIFMTVVYFGPLTCSIITT 275

Query: 242 TRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKP 287
           TR+  +I+ S + F +P+S  Q +G+I+VF  L   + + K S+KP
Sbjct: 276 TRKFFTILASVILFSNPISSIQWVGTILVFLGLGLDATYGKGSKKP 321

Probable sugar transporter.

Xenopus tropicalis (taxid: 8364)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	315
225435088	344	PREDICTED: adenosine 3'-phospho 5'-phosp	0.926	0.848	0.828	1e-144
255580568	349	Adenosine 3'-phospho 5'-phosphosulfate t	0.961	0.868	0.794	1e-144
356547228	352	PREDICTED: adenosine 3'-phospho 5'-phosp	0.939	0.840	0.807	1e-142
356542497	353	PREDICTED: adenosine 3'-phospho 5'-phosp	0.961	0.858	0.771	1e-141
356557455	351	PREDICTED: adenosine 3'-phospho 5'-phosp	0.920	0.826	0.810	1e-141
224054863	347	predicted protein [Populus trichocarpa]	0.949	0.861	0.811	1e-140
297796921	344	hypothetical protein ARALYDRAFT_332244 [	0.952	0.872	0.778	1e-140
297819150	347	UDP-galactose transporter 5 [Arabidopsis	0.926	0.841	0.791	1e-140
449460973	361	PREDICTED: UDP-galactose/UDP-glucose tra	0.939	0.819	0.780	1e-140
51969060	344	unnamed protein product [Arabidopsis tha	0.930	0.851	0.793	1e-139

>gi|225435088|ref|XP_002281454.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1 [Vitis vinifera] gi|297746141|emb|CBI16197.3| unnamed protein product [Vitis vinifera]

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 242/292 (82%), Positives = 268/292 (91%)

Query: 1   MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
           MRVPYGAD EYFKYSLFLVFCNR+ TSAVSAG L+AS+KA+DPVAPVYKYCL+S+SNILT
Sbjct: 40  MRVPYGADKEYFKYSLFLVFCNRITTSAVSAGALLASKKALDPVAPVYKYCLISVSNILT 99

Query: 61  TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
           TTCQYEALKYVSFPVQTLAKCAKMIPVM+WGTLIMQKRY+G DY LA LVT+GCS FIL+
Sbjct: 100 TTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKRYRGPDYLLAFLVTVGCSFFILY 159

Query: 121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
           P  +D+SPYSKGRENTVWGVSLM+GYLGFDGFTSTFQDKLF+GY+MEIHNQIFYTTLCSC
Sbjct: 160 PVASDISPYSKGRENTVWGVSLMMGYLGFDGFTSTFQDKLFRGYNMEIHNQIFYTTLCSC 219

Query: 181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
           +LSL+GLI +GHL LAIDFV  H DCFFD+ LLSTVAT SQFFISYTIRTFGALTFATIM
Sbjct: 220 ILSLAGLIFQGHLPLAIDFVRRHNDCFFDIVLLSTVATASQFFISYTIRTFGALTFATIM 279

Query: 241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEH 292
           TTRQLVSI+LSCVWF HPLSW+Q IG+IIVFG+LY +SF K + +KP PSE 
Sbjct: 280 TTRQLVSIMLSCVWFSHPLSWQQWIGAIIVFGSLYAKSFLKSMPQKPSPSEE 331

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580568|ref|XP_002531108.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis] gi|223529304|gb|EEF31273.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis]

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 243/306 (79%), Positives = 275/306 (89%), Gaps = 3/306 (0%)

Query: 1   MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
           MRVPYG + E+FKYSLFLVFCNR+ TSAVSA  L+AS+KA++PVAP+YKYCL+S+SNILT
Sbjct: 44  MRVPYGVNKEFFKYSLFLVFCNRITTSAVSAAVLLASKKALNPVAPIYKYCLISVSNILT 103

Query: 61  TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
           TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGT+IMQKRYKG DY LA LVTLGCS+FILF
Sbjct: 104 TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTVIMQKRYKGMDYLLAFLVTLGCSVFILF 163

Query: 121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
           P+G D+SPYS+GRENTVWGVSLM+GYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTT+CSC
Sbjct: 164 PAGTDISPYSRGRENTVWGVSLMLGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTVCSC 223

Query: 181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
           +LS +GL+++GHL  AIDFVY H DCFFD+ALLSTVAT SQFFISYTIRTFGALTFA IM
Sbjct: 224 ILSFTGLLIQGHLLPAIDFVYRHNDCFFDIALLSTVATGSQFFISYTIRTFGALTFAAIM 283

Query: 241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNG 300
           TTRQLVSI+LSCVWF HPLSWEQ IG++IVFG+LY ++F K  S +P PSE   E+  NG
Sbjct: 284 TTRQLVSIMLSCVWFSHPLSWEQWIGAVIVFGSLYAKNFLKGGSPRPPPSE---EHTENG 340

Query: 301 ASSLMK 306
           AS+  K
Sbjct: 341 ASTPTK 346

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547228|ref|XP_003542018.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1-like [Glycine max]

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 239/296 (80%), Positives = 271/296 (91%)

Query: 1   MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
           MRVPYG + EYFK+SLFLVFCNR+ TSAVSAG+L+AS+K +DPVAP+YKYCL+S+SNILT
Sbjct: 47  MRVPYGTEKEYFKHSLFLVFCNRITTSAVSAGSLLASKKVLDPVAPIYKYCLISVSNILT 106

Query: 61  TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
           TTCQYEALKYVSFPVQTLAKCAKMIPVM+WG LIMQKRY+G DY LA LVTLGCS FIL+
Sbjct: 107 TTCQYEALKYVSFPVQTLAKCAKMIPVMVWGALIMQKRYQGPDYLLAFLVTLGCSAFILY 166

Query: 121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
           P+G D+SPYS+GRENTVWG+ LMVGYLGFDGFTSTFQDKLF+GYDMEIHNQIFYTTLCSC
Sbjct: 167 PAGTDMSPYSRGRENTVWGILLMVGYLGFDGFTSTFQDKLFRGYDMEIHNQIFYTTLCSC 226

Query: 181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
           VLSL+GLIL+GHL  AI+FVYHH DCFFD+ALLSTVAT SQFFISYTIRTFGALTFATIM
Sbjct: 227 VLSLTGLILQGHLIPAIEFVYHHHDCFFDIALLSTVATISQFFISYTIRTFGALTFATIM 286

Query: 241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMEN 296
           TTRQLVSI+LSCVWF HPLSWEQ IG++IVFG+LY +SF +K+ +K  PS   ++N
Sbjct: 287 TTRQLVSIMLSCVWFAHPLSWEQWIGAVIVFGSLYGKSFSRKMPQKTTPSIALVQN 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542497|ref|XP_003539703.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1-like [Glycine max]

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 236/306 (77%), Positives = 274/306 (89%), Gaps = 3/306 (0%)

Query: 1   MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
           MRVPYG + +YFKYSLFLVFCNR+ TSAVSAG L+AS+KA+DPVAP+YKYCLVS+SNILT
Sbjct: 48  MRVPYGVNKDYFKYSLFLVFCNRITTSAVSAGALLASKKALDPVAPIYKYCLVSVSNILT 107

Query: 61  TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
           T+CQYEALKYVSFPVQTLAKCAKMIPVM+WGT IMQKRY+G DY LA +VTLGCS+FIL+
Sbjct: 108 TSCQYEALKYVSFPVQTLAKCAKMIPVMVWGTAIMQKRYRGTDYLLAFVVTLGCSVFILY 167

Query: 121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
           P+G D+SPY +GRENTVWGV LM+GYLG DGFTSTFQDK+FKGY+MEIHNQIFYTTLCSC
Sbjct: 168 PAGTDISPYGRGRENTVWGVLLMLGYLGCDGFTSTFQDKMFKGYNMEIHNQIFYTTLCSC 227

Query: 181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
           +LSL+GLI++GHL  A++FVY H DCFFD+ALLSTVAT SQFFISYTIRTFGALTFATIM
Sbjct: 228 ILSLAGLIIQGHLLPAVEFVYIHKDCFFDIALLSTVATASQFFISYTIRTFGALTFATIM 287

Query: 241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNG 300
           TTRQLVSI+LSCVWF HPLSWEQ IG++IVFGA+Y +SF +K  EK   S   +E++ NG
Sbjct: 288 TTRQLVSILLSCVWFAHPLSWEQWIGAVIVFGAIYAKSFLRKAPEKTTSS---VEHVQNG 344

Query: 301 ASSLMK 306
            S+ +K
Sbjct: 345 NSNNLK 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557455|ref|XP_003547031.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1-like [Glycine max]

 Score =  506 bits (1302), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 235/290 (81%), Positives = 269/290 (92%)

Query: 1   MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
           MRVPYGA+ EYFK+SLFLVFCNR+ TSAVSA +L+AS+KA+DPVAP+YKYCL+S+SNILT
Sbjct: 46  MRVPYGAEKEYFKHSLFLVFCNRITTSAVSACSLLASKKAMDPVAPIYKYCLISVSNILT 105

Query: 61  TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
           TTCQYEALKYVSFPVQTLAKCAK IPVM+WG LIMQKRY+G DY LA L+TLGCS+FIL+
Sbjct: 106 TTCQYEALKYVSFPVQTLAKCAKTIPVMVWGALIMQKRYQGPDYLLAFLITLGCSVFILY 165

Query: 121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
           P+GAD+SPYS+GRENTVWGV LMVGYLGFDGFTSTFQDKLF+GYDMEIHNQIFYTTLCSC
Sbjct: 166 PAGADMSPYSRGRENTVWGVLLMVGYLGFDGFTSTFQDKLFRGYDMEIHNQIFYTTLCSC 225

Query: 181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
           +LSL+GLIL+GHL  A++FVY+H DCFFD+ALLSTVAT SQFFISYTIRTFGALTFATIM
Sbjct: 226 ILSLTGLILQGHLIPAVEFVYNHHDCFFDIALLSTVATVSQFFISYTIRTFGALTFATIM 285

Query: 241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPS 290
           TTRQLVSI+LSCVWF HPLSWEQ IG++IVFG+LY +SF +K+ +K   S
Sbjct: 286 TTRQLVSIMLSCVWFAHPLSWEQWIGAVIVFGSLYGKSFSRKMPQKTTSS 335

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054863|ref|XP_002298378.1| predicted protein [Populus trichocarpa] gi|222845636|gb|EEE83183.1| predicted protein [Populus trichocarpa]

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 246/303 (81%), Positives = 274/303 (90%), Gaps = 4/303 (1%)

Query: 1   MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
           MRVPYG++ E+FKYSLFLVFCNR+ TSAVSA  L+AS+KA++PVAPV+KYCL+S+SNILT
Sbjct: 40  MRVPYGSNKEFFKYSLFLVFCNRITTSAVSAAALVASKKALNPVAPVHKYCLISVSNILT 99

Query: 61  TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
           TTCQYEALKYVSFPVQTLAKCAKMIPVM+WGT+IMQKRYKG DYFLALLVTLGCSIFILF
Sbjct: 100 TTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTIIMQKRYKGMDYFLALLVTLGCSIFILF 159

Query: 121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
           P+G ++SPYS+GRENTVWGVSLM+GYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC
Sbjct: 160 PAGTEISPYSRGRENTVWGVSLMLGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 219

Query: 181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
           +LSL+GL+L+GHL  AIDFV+ H DCFFD+ALLSTVAT SQFFISYTIRTFGALTFA IM
Sbjct: 220 ILSLTGLVLQGHLLPAIDFVFRHNDCFFDIALLSTVATASQFFISYTIRTFGALTFAAIM 279

Query: 241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNG 300
           TTRQLVSIVLSCVWF HPLSWEQ IG++IVFG+LY R+  K    K  PSEH      NG
Sbjct: 280 TTRQLVSIVLSCVWFAHPLSWEQWIGAVIVFGSLYARNLLKSTPSKLPPSEH----TQNG 335

Query: 301 ASS 303
           ASS
Sbjct: 336 ASS 338

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796921|ref|XP_002866345.1| hypothetical protein ARALYDRAFT_332244 [Arabidopsis lyrata subsp. lyrata] gi|297312180|gb|EFH42604.1| hypothetical protein ARALYDRAFT_332244 [Arabidopsis lyrata subsp. lyrata]

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 236/303 (77%), Positives = 264/303 (87%), Gaps = 3/303 (0%)

Query: 1   MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
           MRVPYG + +YFK+SLFLVFCNRL TSAVSAG L+AS+K +DPVAPVYKYCL+S++NILT
Sbjct: 41  MRVPYGVNKDYFKHSLFLVFCNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILT 100

Query: 61  TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
           TTCQYEALKYVSFPVQTLAKCAKMIPVM+WGTLIMQK+YKG+DY +A LVTLGCS+FILF
Sbjct: 101 TTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILF 160

Query: 121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
           P+G D+SPY+KGRENTVWGVSLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSC
Sbjct: 161 PAGDDVSPYNKGRENTVWGVSLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSC 220

Query: 181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
           VLS +GLIL+GHL  AIDFV  H DC  D+ALLSTVAT SQFFISYTIRTFGALTFA IM
Sbjct: 221 VLSFTGLILQGHLLSAIDFVSLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIM 280

Query: 241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF---KKVSEKPRPSEHPMENM 297
           TTRQL SI+LSC+WF HPLSWEQCIGS+IVFG+LY ++     KK   +P P E P    
Sbjct: 281 TTRQLASIMLSCIWFSHPLSWEQCIGSVIVFGSLYAKNLLNNKKKSQTQPPPPELPQYEK 340

Query: 298 HNG 300
             G
Sbjct: 341 AEG 343

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297819150|ref|XP_002877458.1| UDP-galactose transporter 5 [Arabidopsis lyrata subsp. lyrata] gi|297323296|gb|EFH53717.1| UDP-galactose transporter 5 [Arabidopsis lyrata subsp. lyrata]

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 231/292 (79%), Positives = 263/292 (90%)

Query: 1   MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
           MRVPYG   EYF +SLFLVFCNRL TSAVSA  L+ S+K +DPVAPVYKYCL+S++NILT
Sbjct: 42  MRVPYGLKKEYFTHSLFLVFCNRLTTSAVSAAALLGSKKVLDPVAPVYKYCLISVTNILT 101

Query: 61  TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
           TTCQYEALKYVSFPVQTLAKCAKMIPVM+WGTLIMQK+Y+G+DY +A LVTLGCS+FILF
Sbjct: 102 TTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKYRGFDYLVAFLVTLGCSVFILF 161

Query: 121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
           P+G D+SPY+KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTT+CS 
Sbjct: 162 PAGDDISPYNKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTICSS 221

Query: 181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
           +LS +GLIL+GHL  A+DFV  H DC FD+ALLSTVAT SQFFISYTIRTFGALTFA IM
Sbjct: 222 ILSFTGLILQGHLLPAVDFVSRHRDCLFDIALLSTVATASQFFISYTIRTFGALTFAAIM 281

Query: 241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEH 292
           TTRQLVSI+LSC+WF HPLSWEQCIGS+IVFG+LY ++  KK SEKP+ ++ 
Sbjct: 282 TTRQLVSIMLSCIWFSHPLSWEQCIGSVIVFGSLYAKTLVKKRSEKPQAAQE 333

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460973|ref|XP_004148218.1| PREDICTED: UDP-galactose/UDP-glucose transporter 5B-like [Cucumis sativus] gi|449527659|ref|XP_004170827.1| PREDICTED: UDP-galactose/UDP-glucose transporter 5B-like [Cucumis sativus]

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 231/296 (78%), Positives = 270/296 (91%)

Query: 1   MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
           MRVPYG + +YFK+SLFLVFCNR+ TSAVSAG L+AS+K +DPVAPVYKYCLVS++NILT
Sbjct: 36  MRVPYGVNKDYFKHSLFLVFCNRITTSAVSAGVLLASKKTVDPVAPVYKYCLVSITNILT 95

Query: 61  TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
           TTCQYEALKYVSFPVQTLAKCAKMIPVM+WGT+IMQK+YKG+DY LAL+VTLGCSIF+L+
Sbjct: 96  TTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTIIMQKKYKGHDYLLALIVTLGCSIFVLY 155

Query: 121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
           P+ A++SPY +GRE+TVWGVSLM+GYLGFDGFTSTFQDKLFKGY+M+IHNQIFYTTLCSC
Sbjct: 156 PASAEISPYDRGRESTVWGVSLMIGYLGFDGFTSTFQDKLFKGYNMDIHNQIFYTTLCSC 215

Query: 181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
           +LSL+GLIL+GHL  AI+FVY H DCFFD+A LSTVAT SQFFISYTIRTFGALTFATIM
Sbjct: 216 ILSLTGLILQGHLLPAIEFVYLHKDCFFDIAFLSTVATGSQFFISYTIRTFGALTFATIM 275

Query: 241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMEN 296
           TTRQLVSI+LSCVWF HPLSWEQ IG+++VFG++Y RSF +  ++K   SE P + 
Sbjct: 276 TTRQLVSIMLSCVWFSHPLSWEQWIGAVLVFGSIYARSFLRNATQKLPTSETPEDR 331

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51969060|dbj|BAD43222.1| unnamed protein product [Arabidopsis thaliana] gi|51969064|dbj|BAD43224.1| unnamed protein product [Arabidopsis thaliana]

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 235/296 (79%), Positives = 265/296 (89%), Gaps = 3/296 (1%)

Query: 1   MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
           MRVPYG + E+FK+SLFLVFCNRL TSAVSAG L+AS+K +DPVAPVYKYCL+S++NILT
Sbjct: 41  MRVPYGVNKEFFKHSLFLVFCNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILT 100

Query: 61  TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
           TTCQYEALKYVSFPVQTLAKCAKMIPVM+WGTLIMQK+YKG+DY +A LVTLGCS+FILF
Sbjct: 101 TTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILF 160

Query: 121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
           P+G D+SPY+KGRENTVWGVSLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSC
Sbjct: 161 PAGDDVSPYNKGRENTVWGVSLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSC 220

Query: 181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
           VLS +GLIL+GHL  A+DFV  H DC  D+ALLSTVAT SQFFISYTIRTFGALTFA IM
Sbjct: 221 VLSFTGLILQGHLLPAVDFVSLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIM 280

Query: 241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF--KKVSE-KPRPSEHP 293
           TTRQL SI+LSC+WF HPLSWEQCIGS+IVFG+LY ++    KK S+ +P P E P
Sbjct: 281 TTRQLASIMLSCIWFSHPLSWEQCIGSVIVFGSLYAKNLLNSKKNSQTQPPPPELP 336

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	315
TAIR|locus:2075311	347	UTR5 "AT3G46180" [Arabidopsis	0.911	0.827	0.811	6.4e-131
TAIR|locus:2174289	344	AT5G59740 "AT5G59740" [Arabido	0.930	0.851	0.793	1.5e-129
DICTYBASE|DDB_G0269602	359	slc35b2 "solute carrier family	0.866	0.760	0.487	2.3e-62
ZFIN|ZDB-GENE-050213-1	435	slc35b2 "solute carrier family	0.895	0.648	0.403	2.2e-50
UNIPROTKB|F1NC34	431	SLC35B2 "Uncharacterized prote	0.911	0.665	0.411	1.8e-48
MGI|MGI:1921086	431	Slc35b2 "solute carrier family	0.911	0.665	0.39	4.2e-47
UNIPROTKB|Q3ZBB0	433	SLC35B2 "Uncharacterized prote	0.911	0.662	0.388	2.3e-46
RGD|1565318	431	Slc35b2 "solute carrier family	0.911	0.665	0.386	3e-46
UNIPROTKB|F1PA99	414	SLC35B2 "Uncharacterized prote	0.911	0.693	0.388	7.9e-46
UNIPROTKB|J9NY30	432	SLC35B2 "Uncharacterized prote	0.911	0.664	0.388	7.9e-46

TAIR|locus:2075311 UTR5 "AT3G46180" [Arabidopsis thaliana (taxid:3702)]

 Score = 1284 (457.0 bits), Expect = 6.4e-131, P = 6.4e-131
 Identities = 233/287 (81%), Positives = 262/287 (91%)

Query:     1 MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
             MRVPYG   EYFK+SLFLVFCNRL TSAVSA  L+AS+K +DPVAPVYKYCL+S++NILT
Sbjct:    42 MRVPYGLKKEYFKHSLFLVFCNRLTTSAVSAAALLASKKVLDPVAPVYKYCLISVTNILT 101

Query:    61 TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
             TTCQYEALKYVSFPVQTLAKCAKMIPVM+WGTLIMQK+Y+G+DY +A LVTLGCS+FILF
Sbjct:   102 TTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKYRGFDYLVAFLVTLGCSVFILF 161

Query:   121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
             P+G D+SPY+KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTT+CS 
Sbjct:   162 PAGDDISPYNKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTICSS 221

Query:   181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
             +LS +GLIL+GHL  A+DFV  H DC FD+ALLSTVAT SQFFISYTIRTFGALTFA IM
Sbjct:   222 ILSFTGLILQGHLLPAVDFVSRHRDCLFDIALLSTVATASQFFISYTIRTFGALTFAAIM 281

Query:   241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKP 287
             TTRQL SI+LSC+WF HPLSWEQCIGS+IVFG+LY ++F KK SEKP
Sbjct:   282 TTRQLASIMLSCIWFSHPLSWEQCIGSVIVFGSLYAKTFVKKKSEKP 328

GO:0005354 "galactose transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2174289 AT5G59740 "AT5G59740" [Arabidopsis thaliana (taxid:3702)]

 Score = 1271 (452.5 bits), Expect = 1.5e-129, P = 1.5e-129
 Identities = 235/296 (79%), Positives = 265/296 (89%)

Query:     1 MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
             MRVPYG + E+FK+SLFLVFCNRL TSAVSAG L+AS+K +DPVAPVYKYCL+S++NILT
Sbjct:    41 MRVPYGVNKEFFKHSLFLVFCNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILT 100

Query:    61 TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
             TTCQYEALKYVSFPVQTLAKCAKMIPVM+WGTLIMQK+YKG+DY +A LVTLGCS+FILF
Sbjct:   101 TTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILF 160

Query:   121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
             P+G D+SPY+KGRENTVWGVSLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSC
Sbjct:   161 PAGDDVSPYNKGRENTVWGVSLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSC 220

Query:   181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
             VLS +GLIL+GHL  A+DFV  H DC  D+ALLSTVAT SQFFISYTIRTFGALTFA IM
Sbjct:   221 VLSFTGLILQGHLLPAVDFVSLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIM 280

Query:   241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF--KKVSE-KPRPSEHP 293
             TTRQL SI+LSC+WF HPLSWEQCIGS+IVFG+LY ++    KK S+ +P P E P
Sbjct:   281 TTRQLASIMLSCIWFSHPLSWEQCIGSVIVFGSLYAKNLLNNKKNSQTQPPPPELP 336

GO:0005354 "galactose transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0007062 "sister chromatid cohesion" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0045132 "meiotic chromosome segregation" evidence=RCA

DICTYBASE|DDB_G0269602 slc35b2 "solute carrier family 35 member B2" [Dictyostelium discoideum (taxid:44689)]

 Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
 Identities = 137/281 (48%), Positives = 183/281 (65%)

Query:     1 MRVPY-GADN--EYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSN 57
             M VPY  AD   EYF  S FLV  NR+  + ++   ++   +++  VAP++KY  V++SN
Sbjct:    51 MVVPYKNADGSEEYFTDSTFLVLSNRVFAALMAIVIVLKRGESLKNVAPLHKYVGVALSN 110

Query:    58 ILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF 117
                T CQYEALKYV+FP QTL KC KM+PVM+ GT I  K+Y   DY +AL +T GC IF
Sbjct:   111 FCATWCQYEALKYVNFPTQTLGKCGKMLPVMLVGTFISGKKYGLKDYSIALTITTGCMIF 170

Query:   118 ILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTL 177
              L  +G  +S  +    NT +G+ LM  Y+ FD FTSTFQ+K+FKGY M  ++Q+ Y   
Sbjct:   171 FL--TGK-IS--NNESSNTSYGIILMALYMFFDSFTSTFQEKMFKGYTMSTYDQMIYVNG 225

Query:   178 CSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFA 237
             CS ++S+  LIL G LF AI+F+  H   FFD  +LS  A   Q  I YTI+ FGAL F+
Sbjct:   226 CSSIISVFILILNGRLFPAIEFISTHNGVFFDSTMLSASAGLGQMVIYYTIKEFGALVFS 285

Query:   238 TIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 278
             TIM TRQ+VSI+LS + + HPLS  Q IG+++VFG LY +S
Sbjct:   286 TIMVTRQMVSIILSTLIYLHPLSNTQWIGALLVFGTLYYKS 326

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

ZFIN|ZDB-GENE-050213-1 slc35b2 "solute carrier family 35, member B2" [Danio rerio (taxid:7955)]

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 117/290 (40%), Positives = 173/290 (59%)

Query:    10 EYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALK 69
             E F+ S FLVF NR++   VS G      K     AP+YKY   S+SNIL++ CQYEALK
Sbjct:   152 ERFRDSQFLVFMNRILALTVS-GLWCVLFKQPRHGAPMYKYSFASLSNILSSWCQYEALK 210

Query:    70 YVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY 129
             ++SFP Q LAK +K+IPVM+ G ++ +K Y+ ++Y  A+L++LG S+F+L  S  D  P 
Sbjct:   211 FISFPTQVLAKASKVIPVMLMGKIVSRKSYEYWEYLTAVLISLGVSMFLL-SSSTDKHPS 269

Query:   130 SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL 189
             +     T  GV ++ GY+ FD FTS +QD LFK Y M     +F   L SC+ ++  L+ 
Sbjct:   270 TV---TTFSGVLILAGYIVFDSFTSNWQDNLFK-YKMSSVQMMFGVNLFSCLFTVGSLLE 325

Query:   190 EGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIV 249
             +G  F ++ F+  H +  F   LLS  +   Q FI +TI  FGA  F  IMT RQ ++I+
Sbjct:   326 QGAFFNSLAFMTRHSEFAFHAVLLSVCSAFGQLFIFFTIAQFGAAVFTIIMTLRQALAIL 385

Query:   250 LSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKP--RPSEHPMENM 297
             LSC  + HP+S    +G  +VF AL+ R + +   +K   RP++ P++ +
Sbjct:   386 LSCFLYGHPVSLTGGLGVGVVFLALFLRIYARSRVKKSTKRPAQTPVQKV 435

GO:0055085 "transmembrane transport" evidence=IEA

GO:0051216 "cartilage development" evidence=IMP

GO:0001503 "ossification" evidence=IMP

GO:0030166 "proteoglycan biosynthetic process" evidence=IMP

GO:0042476 "odontogenesis" evidence=IMP

GO:0030198 "extracellular matrix organization" evidence=IMP

GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0001501 "skeletal system development" evidence=IMP

GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IMP

GO:0001649 "osteoblast differentiation" evidence=IMP

UNIPROTKB|F1NC34 SLC35B2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 124/301 (41%), Positives = 170/301 (56%)

Query:     5 YGADN----EYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
             YGA      E FK S FLVF NR++   V AG   A  K     A +YKY   S+SNIL+
Sbjct:   137 YGATETDPGEKFKDSQFLVFMNRILAFTV-AGLYCALTKQPRHGAAMYKYSFASLSNILS 195

Query:    61 TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
             + CQYEALKY+SFP Q LAK +K+IPVM+ G L+  K Y+ ++Y  A L+++G S+F+L 
Sbjct:   196 SWCQYEALKYISFPTQVLAKASKVIPVMMMGKLVSHKSYEYWEYLTAALISVGVSMFLL- 254

Query:   121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
              S A     S     T  GV L+ GY+ FD FTS +QD LF  Y M     +F   + SC
Sbjct:   255 -SSAPNRHVST--VTTFSGVVLLAGYIVFDSFTSNWQDALFT-YKMSPVQMMFGVNVFSC 310

Query:   181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
             + ++  L+ +G L  ++ F+  H +      LLS  +   Q FI YTI  FGA  F  IM
Sbjct:   311 LFTVGSLLEQGALLESVHFMARHSEFTAHAVLLSVCSACGQLFIFYTINQFGAAVFTIIM 370

Query:   241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGAL----YTRSFFKKVSEKPRPSEHPMEN 296
             T RQ  +I+LSC+ + H ++    +G  +VF AL    Y RS  KK S+K  P E P++ 
Sbjct:   371 TLRQAFAILLSCLIYGHTVTVVGGLGIAVVFMALFLRVYARSRMKKRSKKLPPGETPVQK 430

Query:   297 M 297
             +
Sbjct:   431 V 431

GO:0016021 "integral to membrane" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA

MGI|MGI:1921086 Slc35b2 "solute carrier family 35, member B2" [Mus musculus (taxid:10090)]

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 117/300 (39%), Positives = 172/300 (57%)

Query:     5 YGAD----NEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
             YGA      E+F  S FLV  NR++   V AG     RK     AP+Y+Y   S+SN+L+
Sbjct:   138 YGATATSPGEHFTDSQFLVLMNRVLALVV-AGLYCVLRKQPRHGAPMYRYSFASLSNVLS 196

Query:    61 TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
             + CQYEALK+VSFP Q LAK +K+IPVM+ G L+ ++ Y+ ++Y  A L+++G S+F+L 
Sbjct:   197 SWCQYEALKFVSFPTQVLAKASKVIPVMMMGKLVSRRSYEHWEYLTAGLISIGVSMFLL- 255

Query:   121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
              SG +  P S     T+ G+ L+ GY+ FD FTS +QD LF  Y M     +F   L SC
Sbjct:   256 SSGPE--PRSSPA-TTLSGLVLLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSC 311

Query:   181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
             + ++  L+ +G L     F+  H +      LLS  +   Q FI YTI  FGA  F  IM
Sbjct:   312 LFTVGSLLEQGALLEGARFMGRHSEFALHALLLSICSAFGQLFIFYTIGQFGAAVFTIIM 371

Query:   241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF---KKVSEKPRPSEHPMENM 297
             T RQ ++I+LSC+ + H ++    +G  +VF AL  R +    K+  +K  P+E P++ +
Sbjct:   372 TLRQAIAILLSCLLYGHTVTVVGGLGVAVVFTALLLRVYARGRKQRGKKAVPTEPPVQKV 431

GO:0004871 "signal transducer activity" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0007165 "signal transduction" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=ISO

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=ISO

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|Q3ZBB0 SLC35B2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
 Identities = 117/301 (38%), Positives = 169/301 (56%)

Query:     5 YGAD----NEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
             YGA      E F  S FLV  NR++   V AG      K     AP+Y+Y   S+SN+L+
Sbjct:   139 YGATATSPGERFSDSQFLVLMNRILALMV-AGVYCILCKQPRHGAPMYRYSFASLSNVLS 197

Query:    61 TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
             + CQYEALK+VSFP Q LAK +K+IPVM+ G L+ ++ Y+ ++Y  A L+++G S+F+L 
Sbjct:   198 SWCQYEALKFVSFPTQVLAKASKVIPVMLMGKLVSRRSYEHWEYLTAGLISIGVSMFLL- 256

Query:   121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
              SG +  P+S     T+ G+ L+ GY+ FD FTS +QD LF  Y M     +F   L SC
Sbjct:   257 SSGPE--PHSSPA-TTLSGLILLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSC 312

Query:   181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
             + ++  L+ +G L   I F+  H +      LLS  +   Q FI YTI  FGA  F  IM
Sbjct:   313 LFTVGSLLEQGALLEGIRFMGRHSEFAAHTLLLSICSACGQLFIFYTIGQFGAAVFTIIM 372

Query:   241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGAL----YTRSFFKKVSEKPRPSEHPMEN 296
             T RQ  +I+LSC+ + H ++    +G  +VF AL    Y R   K+  +K  P E  ++ 
Sbjct:   373 TLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGKKAMPVESSVQK 432

Query:   297 M 297
             +
Sbjct:   433 V 433

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1565318 Slc35b2 "solute carrier family 35, member B2" [Rattus norvegicus (taxid:10116)]

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 116/300 (38%), Positives = 171/300 (57%)

Query:     5 YGAD----NEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
             YGA      E+F  S FLV  NR++   V AG     RK     AP+Y+Y   S+SN+L+
Sbjct:   138 YGATATSPGEHFTDSQFLVLMNRVLALVV-AGLYCILRKQPRHGAPMYRYSFASLSNVLS 196

Query:    61 TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
             + CQYEALK+VSFP Q LAK +K+IPVM+ G L+ ++ Y+ ++Y  A L+++G S+F+L 
Sbjct:   197 SWCQYEALKFVSFPTQVLAKASKVIPVMMMGKLVSRRSYEHWEYLTAGLISIGVSMFLL- 255

Query:   121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
              SG +  P S     T+ G+ L+ GY+ FD FTS +QD LF  Y M     +F   L SC
Sbjct:   256 SSGPE--PRSSPA-TTLSGLVLLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSC 311

Query:   181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
             + ++  L+ +G L     F+  H +      LLS  +   Q FI YTI  FGA  F  IM
Sbjct:   312 LFTVGSLLEQGALLEGARFMGRHSEFALHALLLSVCSAFGQLFIFYTIGQFGAAVFTIIM 371

Query:   241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF---KKVSEKPRPSEHPMENM 297
             T RQ ++I+LSC+ + H ++    +G  +VF AL  R +    K+  +K  P+E  ++ +
Sbjct:   372 TLRQAIAILLSCLLYGHTVTVVGGLGVAVVFTALLLRVYARGRKQRGKKAVPTEPAVQKV 431

GO:0004871 "signal transducer activity" evidence=IEA;ISO

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0007165 "signal transduction" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA;ISO

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA;ISO

UNIPROTKB|F1PA99 SLC35B2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 117/301 (38%), Positives = 168/301 (55%)

Query:     5 YGAD----NEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
             YGA      E F  S FLV  NR++   V AG      K     AP+Y+Y   S+SN+L+
Sbjct:   120 YGATATSPGERFTDSQFLVLMNRVLALIV-AGLYCVLCKQPRHGAPMYRYSFASLSNVLS 178

Query:    61 TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
             + CQYEALK+VSFP Q LAK +K+IPVM+ G L+ ++ Y+ ++Y  A L+++G S+F+L 
Sbjct:   179 SWCQYEALKFVSFPTQVLAKASKVIPVMLMGKLVSRRSYEHWEYLTAGLISIGVSMFLL- 237

Query:   121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
              SG +  P S     T+ G+ L+ GY+ FD FTS +QD LF  Y M     +F   L SC
Sbjct:   238 SSGPE--PRSSPA-TTLSGLILLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSC 293

Query:   181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
             + ++  L+ +G L     F+  H +      LLS  +   Q FI YTI  FGA  F  IM
Sbjct:   294 LFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIGQFGAAVFTIIM 353

Query:   241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGAL----YTRSFFKKVSEKPRPSEHPMEN 296
             T RQ  +I+LSC+ + H ++    +G  +VF AL    Y R   K+  +K  P E P++ 
Sbjct:   354 TLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGKKAVPVESPVQK 413

Query:   297 M 297
             +
Sbjct:   414 V 414

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|J9NY30 SLC35B2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 117/301 (38%), Positives = 168/301 (55%)

Query:     5 YGAD----NEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
             YGA      E F  S FLV  NR++   V AG      K     AP+Y+Y   S+SN+L+
Sbjct:   138 YGATATSPGERFTDSQFLVLMNRVLALIV-AGLYCVLCKQPRHGAPMYRYSFASLSNVLS 196

Query:    61 TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
             + CQYEALK+VSFP Q LAK +K+IPVM+ G L+ ++ Y+ ++Y  A L+++G S+F+L 
Sbjct:   197 SWCQYEALKFVSFPTQVLAKASKVIPVMLMGKLVSRRSYEHWEYLTAGLISIGVSMFLL- 255

Query:   121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
              SG +  P S     T+ G+ L+ GY+ FD FTS +QD LF  Y M     +F   L SC
Sbjct:   256 SSGPE--PRSSPA-TTLSGLILLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSC 311

Query:   181 VLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 240
             + ++  L+ +G L     F+  H +      LLS  +   Q FI YTI  FGA  F  IM
Sbjct:   312 LFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIGQFGAAVFTIIM 371

Query:   241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGAL----YTRSFFKKVSEKPRPSEHPMEN 296
             T RQ  +I+LSC+ + H ++    +G  +VF AL    Y R   K+  +K  P E P++ 
Sbjct:   372 TLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGKKAVPVESPVQK 431

Query:   297 M 297
             +
Sbjct:   432 V 432

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8AXS6	S35B1_XENTR	No assigned EC number	0.3041	0.8730	0.8513	yes	no
Q6NMB6	UTR5B_ARATH	No assigned EC number	0.7939	0.9301	0.8517	yes	no
Q6NM25	UTR5_ARATH	No assigned EC number	0.7979	0.9269	0.8414	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	315
pfam08449	303	pfam08449, UAA, UAA transporter family	7e-82
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	3e-04
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	0.003

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score =  249 bits (639), Expect = 7e-82
 Identities = 94/285 (32%), Positives = 137/285 (48%), Gaps = 8/285 (2%)

Query: 1   MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 60
           M   YG+      +   L F   L  S V    L+  +K      P+  Y L+  +  L+
Sbjct: 23  MTREYGSP-----FGNLLTFAQFLFISLVGLLYLLLFKKLKPRKIPLKTYVLIVATFFLS 77

Query: 61  TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 120
           +    EALKY+S+P   + K  K+IPVMI G LI  KRY    Y  ALL+TLG  IF L 
Sbjct: 78  SVLNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKRYSSLQYLSALLITLGVIIFTLA 137

Query: 121 PSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC 180
            +    +       +   G++L+ G L  D  T   Q+KL+K Y       +FY+ L S 
Sbjct: 138 SAKDSKNSKLTTFSDN-VGIALLFGALLMDALTGNTQEKLYKKYGKHSKEMMFYSHLLSL 196

Query: 181 VLSLSGLILEGHLFL--AIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFAT 238
              L GL+      L  A  F   H    F + L S      QFF+ Y I  FGALT   
Sbjct: 197 PFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLTQYVGQFFVFYLISEFGALTVTL 256

Query: 239 IMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV 283
           + T R+ VS++LS + F +PL+ +Q +G+++VF  ++  ++ KK 
Sbjct: 257 VTTLRKFVSLLLSVLLFGNPLTLQQWLGTLLVFLGIFLYAYLKKK 301

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 10/139 (7%)

Query: 149 FDGFTSTFQDKLFKGYDMEIHN---QIFYTTLCSCVLSLSGLILEG--HLFLAIDFVYHH 203
                     KL K       N    ++Y +  + ++ L GL+      L   I   +  
Sbjct: 11  LFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKLGKFILKFFGD 70

Query: 204 LDCFFDVALLSTVATTSQF--FISY-TIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLS 260
           L     V LL      +      ++  +     LT +   T +++V IVLS + F  P++
Sbjct: 71  LKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVLSVIIFGDPVT 130

Query: 261 WEQCIGSII-VFG-ALYTR 277
           +   +G  I + G  LY+ 
Sbjct: 131 FLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 38.3 bits (89), Expect = 0.003
 Identities = 36/232 (15%), Positives = 72/232 (31%), Gaps = 15/232 (6%)

Query: 52  LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVT 111
           L  +   L     + ALKY S  V +L      +   +   L++          L +L+ 
Sbjct: 75  LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLA 134

Query: 112 LGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQ 171
           L   + IL   G             + G+ L +         +    +L +   + +   
Sbjct: 135 LAGVLLILLGGGGGGILS-------LLGLLLALAAALLWALYTALVKRLSRLGPVTL--A 185

Query: 172 IFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTF 231
           +    L + +L L   +      +              + L       +     Y +R  
Sbjct: 186 LLLQLLLALLLLLLFFLSGFGAPILS------RAWLLLLYLGVFSTGLAYLLWYYALRLL 239

Query: 232 GALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV 283
           GA   A +     + + +L  +    PLS  Q +G+ +V   +   S   + 
Sbjct: 240 GASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRARR 291

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	315
KOG1581	327	consensus UDP-galactose transporter related protei	100.0
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	100.0
KOG1580	337	consensus UDP-galactose transporter related protei	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.97
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
PLN00411	358	nodulin MtN21 family protein; Provisional	99.96
KOG1582	367	consensus UDP-galactose transporter related protei	99.96
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.95
PRK11272	292	putative DMT superfamily transporter inner membran	99.94
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.94
PRK11689	295	aromatic amino acid exporter; Provisional	99.93
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.93
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.93
PRK15430	296	putative chloramphenical resistance permease RarD;	99.92
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.92
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.91
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.91
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.87
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.85
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.85
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.84
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.84
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.83
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.82
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.81
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.78
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.72
KOG2765	416	consensus Predicted membrane protein [Function unk	99.71
KOG2766	336	consensus Predicted membrane protein [Function unk	99.66
COG2962	293	RarD Predicted permeases [General function predict	99.66
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.64
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.63
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.61
COG2510	140	Predicted membrane protein [Function unknown]	99.19
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.18
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.05
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.98
PRK15430	296	putative chloramphenical resistance permease RarD;	98.93
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.93
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.88
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.84
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.72
COG2510	140	Predicted membrane protein [Function unknown]	98.62
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.61
PLN00411	358	nodulin MtN21 family protein; Provisional	98.52
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.44
COG2962	293	RarD Predicted permeases [General function predict	98.41
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.35
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.28
PRK11272	292	putative DMT superfamily transporter inner membran	98.23
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.15
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.11
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.09
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.07
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.06
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.06
PRK11689	295	aromatic amino acid exporter; Provisional	98.03
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.99
PRK13499	345	rhamnose-proton symporter; Provisional	97.87
PRK13499	345	rhamnose-proton symporter; Provisional	97.81
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.79
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.78
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.76
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.69
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.57
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.56
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.53
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.48
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.44
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.34
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.32
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.3
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.28
COG2076	106	EmrE Membrane transporters of cations and cationic	97.24
PRK11431	105	multidrug efflux system protein; Provisional	97.23
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.2
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.18
PRK11431	105	multidrug efflux system protein; Provisional	97.1
COG2076	106	EmrE Membrane transporters of cations and cationic	97.02
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	96.8
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.8
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.6
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.46
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.39
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.38
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.24
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.99
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.98
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	95.82
KOG4510	346	consensus Permease of the drug/metabolite transpor	95.69
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	94.71
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	94.64
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	94.25
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	94.12
KOG2765	416	consensus Predicted membrane protein [Function unk	93.13
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	92.75
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	91.1
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	90.97
KOG1580	337	consensus UDP-galactose transporter related protei	90.85
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	90.31
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	89.48
KOG1581	327	consensus UDP-galactose transporter related protei	89.47
KOG3912	372	consensus Predicted integral membrane protein [Gen	87.58
KOG2922	335	consensus Uncharacterized conserved protein [Funct	86.8
KOG1582	367	consensus UDP-galactose transporter related protei	83.83
KOG2766	336	consensus Predicted membrane protein [Function unk	82.56
PRK06638	198	NADH:ubiquinone oxidoreductase subunit J; Provisio	81.64

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.9e-42  Score=298.99  Aligned_cols=283  Identities=50%  Similarity=0.844  Sum_probs=264.4

Q ss_pred             CccccCCCCCcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHHHh
Q 021258            1 MRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAK   80 (315)
Q Consensus         1 ~~~~~~~~~~~f~~p~~lt~~q~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~   80 (315)
                      +|++|.+|+++|++|+++.++|.+++.+....++.+++...+.+.|++.|..+++.+.++.++++.|++|++.|++++.|
T Consensus        37 ~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaK  116 (327)
T KOG1581|consen   37 MTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAK  116 (327)
T ss_pred             eecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHH
Confidence            68999999999999999999999999999998887776667778999999999999999999999999999999999999


Q ss_pred             hcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHH
Q 021258           81 CAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKL  160 (315)
Q Consensus        81 ~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l  160 (315)
                      +|+.+++|+.+.++.|+|++..+++...++..|+.++...+..+ . .+..+..++++|+.++..+.+++|+.+..|+++
T Consensus       117 scKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~-s-~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~l  194 (327)
T KOG1581|consen  117 SCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD-S-SSKSGRENSPIGILLLFGYLLFDGFTNATQDSL  194 (327)
T ss_pred             HhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC-C-ccccCCCCchHhHHHHHHHHHHHhhHHhHHHHH
Confidence            99999999999999999999999999999999999998876533 1 222235789999999999999999999999999


Q ss_pred             HccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHH
Q 021258          161 FKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM  240 (315)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~  240 (315)
                      .+++++++.++|++.++++++....+++..|.+.+.++|...+|+.+..+++++.|++++|.++++.+++.+|.+.+.+.
T Consensus       195 f~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~  274 (327)
T KOG1581|consen  195 FKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIM  274 (327)
T ss_pred             hccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHH
Confidence            99999999999999999999999988888888888899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhccccC
Q 021258          241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE  285 (315)
Q Consensus       241 ~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~~  285 (315)
                      +.|+.++++++.++||+++++.||.|..++++|+.+..+.|+|++
T Consensus       275 ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~~  319 (327)
T KOG1581|consen  275 TTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKKN  319 (327)
T ss_pred             HHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999888744

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=100.00  E-value=8e-37  Score=279.10  Aligned_cols=272  Identities=36%  Similarity=0.530  Sum_probs=241.8

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHHH
Q 021258           13 KYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGT   92 (315)
Q Consensus        13 ~~p~~lt~~q~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~   92 (315)
                      ++|.+++++|+..+.+.+.++....+.+.+++.|+++|++.++++.++..++|.|++|+|.|+++++|+++|+++|+++.
T Consensus        30 ~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~  109 (303)
T PF08449_consen   30 PFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGV  109 (303)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHH
Confidence            68999999999999999988776666344567899999999999999999999999999999999999999999999999


Q ss_pred             HHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHH
Q 021258           93 LIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQI  172 (315)
Q Consensus        93 l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~  172 (315)
                      +++|||++++|+++++++++|++++...+..++..+ .........|+++++++.+++|+..++|||++++++.++.++|
T Consensus       110 l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~-~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~m  188 (303)
T PF08449_consen  110 LILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS-NSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELM  188 (303)
T ss_pred             HhcCccccHHHHHHHHHHHhhHheeeeccccccccc-ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHH
Confidence            999999999999999999999999887754222111 1011222349999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHH--hCchhHHhHhhhhChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHH
Q 021258          173 FYTTLCSCVLSLSGLIL--EGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVL  250 (315)
Q Consensus       173 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~il  250 (315)
                      +|.+.+++++.++..+.  .++..+..++...+|..+..++..++++++++.+++..+++.||.+.+++.++|+++++++
T Consensus       189 fy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sill  268 (303)
T PF08449_consen  189 FYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILL  268 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHH
Confidence            99999999998887766  7787777788777888888888889999999999999999999999999999999999999


Q ss_pred             HHHHccCCCcchhhhhHHHHHHHHHhhhhhccccC
Q 021258          251 SCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE  285 (315)
Q Consensus       251 s~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~~  285 (315)
                      |+++||+++++.+|+|+++++.|..++.+.|+||+
T Consensus       269 S~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  269 SVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            99999999999999999999999999998888764

; GO: 0055085 transmembrane transport

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.8e-36  Score=254.30  Aligned_cols=277  Identities=31%  Similarity=0.511  Sum_probs=246.9

Q ss_pred             CccccCC---CCCcccchhHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCchhhHHHHHHHHHHHHHHhhHhcccCchHHH
Q 021258            1 MRVPYGA---DNEYFKYSLFLVFCNRLMTSAVSAGTLIASR-KAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQ   76 (315)
Q Consensus         1 ~~~~~~~---~~~~f~~p~~lt~~q~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~   76 (315)
                      +|-+|+.   ..++|++.+.++++|+++..+++-+....++ .+.+ +.+.+.|...++.+.+++...|.|+||+|.+++
T Consensus        36 trGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D-~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTq  114 (337)
T KOG1580|consen   36 TRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEID-NTPTKMYAACSASYLLAMVSSNQALQYVPYPTQ  114 (337)
T ss_pred             hccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeeccccccc-CCcchHHHHHHHHHHHHHHhccchhcccCCcHH
Confidence            3567874   4678999999999999999999866555444 3444 456688999999999999999999999999999


Q ss_pred             HHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHH
Q 021258           77 TLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTF  156 (315)
Q Consensus        77 ~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~  156 (315)
                      .+-|+|.|+++|+++.++.|++++|++++.++++.+||+++.+++...    ...++.....|-++.++|...+++....
T Consensus       115 VlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv----~g~e~~t~g~GElLL~lSL~mDGlTg~~  190 (337)
T KOG1580|consen  115 VLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKV----GGAEDKTFGFGELLLILSLAMDGLTGSI  190 (337)
T ss_pred             HhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccccc----CCCcccccchHHHHHHHHHHhcccchhH
Confidence            999999999999999999999999999999999999999999874321    1123466778999999999999999999


Q ss_pred             HHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHH
Q 021258          157 QDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTF  236 (315)
Q Consensus       157 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~  236 (315)
                      |+++.+.+..+..++|+|.++++.+.+...++++||.++...|.+.+|..|+.+.+++++++++|.+++..+...+|.+.
T Consensus       191 Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtC  270 (337)
T KOG1580|consen  191 QDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTC  270 (337)
T ss_pred             HHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeE
Confidence            99998888878899999999999999988889999999988898999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhcc
Q 021258          237 ATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  282 (315)
Q Consensus       237 si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~  282 (315)
                      |++.+.++.++++.|+++|+++++.+||.|.++++.++..-....|
T Consensus       271 SivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK  316 (337)
T KOG1580|consen  271 SIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGK  316 (337)
T ss_pred             EEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCC
Confidence            9999999999999999999999999999999999998877664444

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=1.3e-31  Score=244.79  Aligned_cols=270  Identities=12%  Similarity=0.052  Sum_probs=208.6

Q ss_pred             cccCCCCCcccchhHHHHHHHHHHHHHHHHHHHh--hcCCCCCCCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHHHh
Q 021258            3 VPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIA--SRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAK   80 (315)
Q Consensus         3 ~~~~~~~~~f~~p~~lt~~q~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~   80 (315)
                      |||..+.  |++|.++++.|+.++.+.+.+....  ++++..++++++..++.|+++.....+.|.|++|++++.+++++
T Consensus        21 NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~   98 (302)
T TIGR00817        21 NKKLLNV--FPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIK   98 (302)
T ss_pred             HHHHHhh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence            6788863  8999999999999998776654211  11111123456667889999888889999999999999999999


Q ss_pred             hcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHH
Q 021258           81 CAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKL  160 (315)
Q Consensus        81 ~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l  160 (315)
                      ++.|+++++++++++|||++++++++++++++|+++....    +       .+.+..|++++++++++++++.++.||.
T Consensus        99 ~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~----~-------~~~~~~G~~~~l~a~~~~a~~~v~~k~~  167 (302)
T TIGR00817        99 AMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT----E-------LSFNWAGFLSAMISNITFVSRNIFSKKA  167 (302)
T ss_pred             hcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC----c-------ccccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999875321    1       1345679999999999999999999998


Q ss_pred             HccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHh-Hhhh----hChH-HHHHHHHHHH-HHHHHHHHHHHHHhhhCh
Q 021258          161 FKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAI-DFVY----HHLD-CFFDVALLST-VATTSQFFISYTIRTFGA  233 (315)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~-~~~~l~~~~~-~~~~~~~~~~~~~~~~~a  233 (315)
                      .++.+.++.+.++|++..+++.++|.....++..... +...    .... .+...+..+. +..+.+.+++.+++++||
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa  247 (302)
T TIGR00817       168 MTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSP  247 (302)
T ss_pred             hccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence            7744567889999999999988888755433211100 0100    0111 1211222222 233344566789999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhccccC
Q 021258          234 LTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE  285 (315)
Q Consensus       234 ~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~~  285 (315)
                      +++++.++++|++++++|++++||++++.+++|.+++++|++++++.|+||+
T Consensus       248 ~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~  299 (302)
T TIGR00817       248 LTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP  299 (302)
T ss_pred             hHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence            9999999999999999999999999999999999999999999887665554

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.97  E-value=7.4e-29  Score=230.53  Aligned_cols=265  Identities=12%  Similarity=0.052  Sum_probs=201.1

Q ss_pred             cccCCCCCcccchhHHHHHHHHHHHHHHHHHHHhhcCCCC----CCCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHH
Q 021258            3 VPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAID----PVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTL   78 (315)
Q Consensus         3 ~~~~~~~~~f~~p~~lt~~q~l~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~   78 (315)
                      |||..+.  +++|.+++++|++++++++.++...+.++.+    .+.++++.++.|+++.......+.|+++++++.+.+
T Consensus        68 nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~i  145 (350)
T PTZ00343         68 NKLALNM--LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHV  145 (350)
T ss_pred             HHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence            5666654  7889999999999998876554322211111    122445678999998877777889999999999999


Q ss_pred             HhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHH
Q 021258           79 AKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQD  158 (315)
Q Consensus        79 l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~  158 (315)
                      +|++.|+++++++++++|||++++++++++++++|+++.+..    |       ...++.|++++++|++++++++++.|
T Consensus       146 ika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~----~-------~~~~~~G~~~~l~s~~~~a~~~i~~k  214 (350)
T PTZ00343        146 VKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVK----E-------LHFTWLAFWCAMLSNLGSSLRSIFAK  214 (350)
T ss_pred             HHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecc----c-------chhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999987643    2       14568899999999999999999999


Q ss_pred             HHHccCC-----CChHHHHHHHHHHHHHHHHHHHH-HhCc-hhHHhHhh--hhChHHHHHHHHH----HHHHHHHHHHHH
Q 021258          159 KLFKGYD-----MEIHNQIFYTTLCSCVLSLSGLI-LEGH-LFLAIDFV--YHHLDCFFDVALL----STVATTSQFFIS  225 (315)
Q Consensus       159 ~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~--~~~~~~~~~l~~~----~~~~~~~~~~~~  225 (315)
                      +.+++++     .++.+...+...++.++++|..+ .++. ....++..  ......+..+++.    +++..+.+.+.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f  294 (350)
T PTZ00343        215 KTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAF  294 (350)
T ss_pred             HHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9887643     45666666778889888888754 3321 11111100  0011111112222    233333344555


Q ss_pred             HHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhh
Q 021258          226 YTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  280 (315)
Q Consensus       226 ~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~  280 (315)
                      .++++++|.++++.+++||++++++|++++||++++.+++|.+++++|+.++++-
T Consensus       295 ~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        295 YCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            7999999999999999999999999999999999999999999999999888765

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=9e-28  Score=218.88  Aligned_cols=270  Identities=16%  Similarity=0.175  Sum_probs=211.2

Q ss_pred             CCcccchhHHHHHHHHHHHHHHHHHHHhhcCCC----CCCCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHHHhhcch
Q 021258            9 NEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAI----DPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKM   84 (315)
Q Consensus         9 ~~~f~~p~~lt~~q~l~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p   84 (315)
                      +.+++.|.+-++..++.-.++-..++.+|+.+.    ..++++++|++.+++...++++.+.|++|++.+.++++.++..
T Consensus        37 ~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i  116 (334)
T PF06027_consen   37 NKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSI  116 (334)
T ss_pred             hcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhh
Confidence            347888999999998776666555555554321    2357888999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccC
Q 021258           85 IPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY  164 (315)
Q Consensus        85 ~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~  164 (315)
                      +++++++++++|+|+++.|++|++++++|+.++...|....  +++++.++...|+++++.|+++||++++++|++.|+.
T Consensus       117 ~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~--~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~  194 (334)
T PF06027_consen  117 PFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSG--SDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA  194 (334)
T ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccccc--ccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC
Confidence            99999999999999999999999999999999888764211  1112346789999999999999999999999998864


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHH-hCchhHHhHhhhhChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHH
Q 021258          165 DMEIHNQIFYTTLCSCVLSLSGLIL-EGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTR  243 (315)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~  243 (315)
                        +..+.+....++++++..+...+ +.+-   +...+.+.+.+..++..+++-.+...+.-..++..||+..++-....
T Consensus       195 --~~~~~lg~~Glfg~ii~~iq~~ile~~~---i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTs  269 (334)
T PF06027_consen  195 --PRVEFLGMLGLFGFIISGIQLAILERSG---IESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTS  269 (334)
T ss_pred             --CHHHHHHHHHHHHHHHHHHHHHheehhh---hhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHh
Confidence              56788888888998887765432 3221   11112233433333333333334444556679999999999999999


Q ss_pred             HHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhccccC
Q 021258          244 QLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE  285 (315)
Q Consensus       244 ~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~~  285 (315)
                      .+.++++++++||+++++..++|.++++.|++++....++.+
T Consensus       270 d~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~  311 (334)
T PF06027_consen  270 DFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEE  311 (334)
T ss_pred             hHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccc
Confidence            999999999999999999999999999999988886655443

Some of the sequences in this family are annotated as putative membrane proteins.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.96  E-value=5.5e-27  Score=217.61  Aligned_cols=268  Identities=15%  Similarity=0.219  Sum_probs=193.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCchh---hHHHHHHHHHHHHHHhhHhcccCchHHHHHHhhcchHHHHHH
Q 021258           15 SLFLVFCNRLMTSAVSAGTLIASRK-AIDPVAPVY---KYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIW   90 (315)
Q Consensus        15 p~~lt~~q~l~~~l~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll   90 (315)
                      |..++++|+.++.+++.++.+++++ +..++.+++   .+.+.|++......+.+.|++|++++.+.++.++.|++++++
T Consensus        42 ~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~ll  121 (358)
T PLN00411         42 IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFIL  121 (358)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHH
Confidence            6668999999999888877655432 222223343   345566665445568899999999999999999999999999


Q ss_pred             HHHH------hccccChhhHHHHHHHHHhHHHHhcCCCCCCCC------------C--CCCCCCchhhHHHHHHHHHHhh
Q 021258           91 GTLI------MQKRYKGYDYFLALLVTLGCSIFILFPSGADLS------------P--YSKGRENTVWGVSLMVGYLGFD  150 (315)
Q Consensus        91 ~~l~------~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~------------~--~~~~~~~~~~G~~~~~~s~~~~  150 (315)
                      ++++      +|||.+++++++++++++|+.++...++.....            .  ...+..+...|.++++.++++|
T Consensus       122 a~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~w  201 (358)
T PLN00411        122 AIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFV  201 (358)
T ss_pred             HHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHH
Confidence            9999      699999999999999999998876532100000            0  0001123356999999999999


Q ss_pred             hhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHH-HHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021258          151 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSL-SGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIR  229 (315)
Q Consensus       151 a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  229 (315)
                      +++++.+++..+++. +.....+++..++.+... +.+..+++....+ ....+.. ...+++.++++.+++.+++++++
T Consensus       202 a~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~-~~~i~y~~i~t~lay~lw~~~v~  278 (358)
T PLN00411        202 SVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW-IIHFDIT-LITIVTMAIITSVYYVIHSWTVR  278 (358)
T ss_pred             HHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHHHccCCcccc-eeccchH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999877763 334455555555444333 3333332211111 0011222 23355566666677888999999


Q ss_pred             hhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhccccC
Q 021258          230 TFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE  285 (315)
Q Consensus       230 ~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~~  285 (315)
                      +.+|+++++..+++|++++++|++++||++++.+++|.+++++|+++..+.|+||.
T Consensus       279 ~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~  334 (358)
T PLN00411        279 HKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEE  334 (358)
T ss_pred             ccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence            99999999999999999999999999999999999999999999999987666554

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.96  E-value=9e-28  Score=205.73  Aligned_cols=271  Identities=28%  Similarity=0.402  Sum_probs=239.9

Q ss_pred             CCCccc-chhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHHHhhcchHH
Q 021258            8 DNEYFK-YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIP   86 (315)
Q Consensus         8 ~~~~f~-~p~~lt~~q~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~   86 (315)
                      +.++|+ +-..+|++|+++=..+.++++..-+. .++..|||.|..++.+....+.+.+-|+.|++.|+++++|+|+.++
T Consensus        67 ~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~-k~r~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliP  145 (367)
T KOG1582|consen   67 NVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQT-KRRVIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIP  145 (367)
T ss_pred             ccccCcccchHHHHHHHHHHHhhhheEEEeecc-cceecchhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhh
Confidence            456777 88999999999888777776643322 3557999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCC
Q 021258           87 VMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDM  166 (315)
Q Consensus        87 ~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~  166 (315)
                      +|+.+.++-++|+++.++.+..++.+|++++...|++    .   .+.++..|+++.-.|.+++|.-...||+.++.++.
T Consensus       146 VmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~----~---sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~  218 (367)
T KOG1582|consen  146 VMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQ----T---SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPA  218 (367)
T ss_pred             hhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccc----c---CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCC
Confidence            9999999999999999999999999999999887531    1   14788999999999999999999999999998888


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhCh-HHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHH
Q 021258          167 EIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHL-DCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQL  245 (315)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v  245 (315)
                      +..|+.+|....+.++.+.....+|++.++|.+-..+| +.....+..++.+.+++.+.-..++..+|.++..+.+.++.
T Consensus       219 ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKa  298 (367)
T KOG1582|consen  219 SSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKA  298 (367)
T ss_pred             CcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhH
Confidence            88999999999999998888888999888888765555 46666677788899999888889999999999999999999


Q ss_pred             HHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhccccCC
Q 021258          246 VSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEK  286 (315)
Q Consensus       246 ~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~~~  286 (315)
                      +++++|+++|..++|....-|..++..|+++..++|++|.+
T Consensus       299 vTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk~~  339 (367)
T KOG1582|consen  299 VTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNKIP  339 (367)
T ss_pred             HHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCCCc
Confidence            99999999999999999999999999999999999976643

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.95  E-value=1.1e-28  Score=222.12  Aligned_cols=274  Identities=18%  Similarity=0.189  Sum_probs=226.3

Q ss_pred             ccccCCCCCcccchhHHHHHHHHHHHHHHHHHHHhhcC---CCCCCCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHH
Q 021258            2 RVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRK---AIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTL   78 (315)
Q Consensus         2 ~~~~~~~~~~f~~p~~lt~~q~l~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~   78 (315)
                      -|||..+..+|++|.++|.+|..++.+........+-.   +.+.+.+++..++.|+++.++..++|.|++|+|++...+
T Consensus        35 ~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~  114 (316)
T KOG1441|consen   35 LNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQT  114 (316)
T ss_pred             eeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHHH
Confidence            48899999999999999999887777665554333322   112346788889999999999999999999999999999


Q ss_pred             HhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHH
Q 021258           79 AKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQD  158 (315)
Q Consensus        79 l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~  158 (315)
                      +|++.|+++.++++++.+|++++..+++++++..||++.+..    |       .+.+++|.+.++++.+..++++++.+
T Consensus       115 iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~----e-------~~fn~~G~i~a~~s~~~~al~~I~~~  183 (316)
T KOG1441|consen  115 IKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVT----E-------LSFNLFGFISAMISNLAFALRNILSK  183 (316)
T ss_pred             HHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeec----c-------ccccHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999988764    2       36899999999999999999999999


Q ss_pred             HHHc--cCCCChHHHHHHHHHHHHHHHH-HHHHH-hCchhHHhHhhhhChHHHHHHHHHHHHHHHHHHHHHHHHhhhChH
Q 021258          159 KLFK--GYDMEIHNQIFYTTLCSCVLSL-SGLIL-EGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGAL  234 (315)
Q Consensus       159 ~l~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~  234 (315)
                      ++++  +++.++.+++.|+++.+...++ |.... +++....+.....+.+ ....+...++.+..|...+.++.++||.
T Consensus       184 ~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sv~~f~~Nls~f~~ig~tSal  262 (316)
T KOG1441|consen  184 KLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNSVLAFLLNLSAFLVIGRTSAL  262 (316)
T ss_pred             HhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHHHHHHHHHHHHHHHHcccCch
Confidence            9984  5678999999999999999888 76443 2321100010011112 2223344578888888999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhccccCCC
Q 021258          235 TFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKP  287 (315)
Q Consensus       235 ~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~~~~  287 (315)
                      +.++.+.+|.++.++.|+++|++++++.+..|+++.+.|+.+|++.|++++++
T Consensus       263 T~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  263 TYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG  315 (316)
T ss_pred             hhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            99999999999999999999999999999999999999999999888876643

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.94  E-value=3.5e-24  Score=194.78  Aligned_cols=253  Identities=12%  Similarity=0.067  Sum_probs=194.2

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHH-HHHHHHhhHhc-ccCchHHHHHHhhcchHHHHHH
Q 021258           13 KYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSN-ILTTTCQYEAL-KYVSFPVQTLAKCAKMIPVMIW   90 (315)
Q Consensus        13 ~~p~~lt~~q~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~al-~~v~~~~~~~l~~~~p~~~~ll   90 (315)
                      -.|..++++|+.++.++..++...+|++.+++++++.....|.+. .....+.+.+. ++++.+.+.++.++.|++++++
T Consensus        34 ~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~ll  113 (292)
T PRK11272         34 WPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCF  113 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHH
Confidence            359999999999999888777655554333344455556677664 45677788888 9999998999999999999999


Q ss_pred             HHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHH
Q 021258           91 GTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHN  170 (315)
Q Consensus        91 ~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~  170 (315)
                      +.+ +|||++++++.+++++++|+.++..++   +       .+....|.++.+.++++++.+.+..||..++   ++..
T Consensus       114 a~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~---~-------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~  179 (292)
T PRK11272        114 SRL-FGIRTRKLEWLGIAIGLAGIVLLNSGG---N-------LSGNPWGAILILIASASWAFGSVWSSRLPLP---VGMM  179 (292)
T ss_pred             HHH-hcccCchhHHHHHHHHHHhHHHHhcCc---c-------cccchHHHHHHHHHHHHHHHHHHHHHhcCCC---cchH
Confidence            986 699999999999999999998875331   1       1234579999999999999999998886432   2334


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHH-HHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHH
Q 021258          171 QIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST-VATTSQFFISYTIRTFGALTFATIMTTRQLVSIV  249 (315)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~i  249 (315)
                      ...+....+.+...+.....++...    ...+...|..+++.++ ++.+++.++++++|+.++.++++..+++|+++.+
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i  255 (292)
T PRK11272        180 AGAAEMLAAGVVLLIASLLSGERLT----ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVL  255 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCccc----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence            4556666666666555433322110    0123455666777766 4677888999999999999999999999999999


Q ss_pred             HHHHHccCCCcchhhhhHHHHHHHHHhhhhhccc
Q 021258          250 LSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV  283 (315)
Q Consensus       250 ls~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~  283 (315)
                      ++++++||++++.+++|.++++.|+++.++.++|
T Consensus       256 ~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~  289 (292)
T PRK11272        256 LGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL  289 (292)
T ss_pred             HHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999887765553

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.94  E-value=1.5e-23  Score=191.33  Aligned_cols=255  Identities=13%  Similarity=0.169  Sum_probs=185.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHH-HHHHHhhHhccc-CchHHHHHHhhcchHHHHHHH
Q 021258           14 YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNI-LTTTCQYEALKY-VSFPVQTLAKCAKMIPVMIWG   91 (315)
Q Consensus        14 ~p~~lt~~q~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~al~~-v~~~~~~~l~~~~p~~~~ll~   91 (315)
                      .|..++++|++++.+...+..  +++    +.+++..+..+++.. ....+.+.+++| ++.+.+.++.++.|+++++++
T Consensus        31 ~p~~~~~~R~~~a~~~l~~~~--~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~  104 (299)
T PRK11453         31 PPLMLAGLRFMLVAFPAIFFV--ARP----KVPLNLLLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLG  104 (299)
T ss_pred             CHHHHHHHHHHHHHHHHHHHh--cCC----CCchHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHH
Confidence            499999999998776655433  222    223444555566543 344567788887 677888888899999999999


Q ss_pred             HHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCC-CChHH
Q 021258           92 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYD-MEIHN  170 (315)
Q Consensus        92 ~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~-~~~~~  170 (315)
                      ++++|||++++++++++++++|+.++...+.  +      ....++.|+++++.++++++++.+.+||..++.+ .+...
T Consensus       105 ~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~--~------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~  176 (299)
T PRK11453        105 AFTFGERLQGKQLAGIALAIFGVLVLIEDSL--N------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMS  176 (299)
T ss_pred             HHHhcCcCcHHHHHHHHHHHHhHHHhccccC--C------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhH
Confidence            9999999999999999999999988764311  0      0123467999999999999999999999765432 12223


Q ss_pred             HHHHHHHHHHHHHHHH-HHHhCchhHHhHhhhhChHHHHHHHHHHH-HHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHH
Q 021258          171 QIFYTTLCSCVLSLSG-LILEGHLFLAIDFVYHHLDCFFDVALLST-VATTSQFFISYTIRTFGALTFATIMTTRQLVSI  248 (315)
Q Consensus       171 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~  248 (315)
                      ..++....+.+..... ...+++.....+....++..|..++++++ ++.+++.+++.++++.++.+++++.+++|+++.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~  256 (299)
T PRK11453        177 LVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGL  256 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            3334444433322222 12222211111111234566777788875 566788899999999999999999999999999


Q ss_pred             HHHHHHccCCCcchhhhhHHHHHHHHHhhhhhcc
Q 021258          249 VLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  282 (315)
Q Consensus       249 ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~  282 (315)
                      +++++++||++++.+++|.++++.|+++..+.++
T Consensus       257 ~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        257 ASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            9999999999999999999999999998877665

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.93  E-value=5.3e-24  Score=193.85  Aligned_cols=255  Identities=11%  Similarity=-0.016  Sum_probs=181.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHH-HHHHHHHHhhHhccc----CchHHHHHHhhcchHHHH
Q 021258           14 YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSM-SNILTTTCQYEALKY----VSFPVQTLAKCAKMIPVM   88 (315)
Q Consensus        14 ~p~~lt~~q~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~al~~----v~~~~~~~l~~~~p~~~~   88 (315)
                      .|..+.++|+.++.++..+..  ++++.  ++..++++..+. .......+.+.+++|    .+.....++.++.|++++
T Consensus        31 ~P~~~~~~R~~~a~l~l~~~~--~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~  106 (295)
T PRK11689         31 GPVGGAAMIYSVSGLLLLLTV--GFPRL--RQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTI  106 (295)
T ss_pred             ChHHHHHHHHHHHHHHHHHHc--ccccc--ccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHH
Confidence            499999999999988876542  22211  222334444444 345566677777765    455566788999999999


Q ss_pred             HHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCCh
Q 021258           89 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEI  168 (315)
Q Consensus        89 ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~  168 (315)
                      +++++++|||++++++++++++++|+.++...+.+.+..+..++..+...|+++.+.++++|++++++.||..+++  ++
T Consensus       107 ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~--~~  184 (295)
T PRK11689        107 LFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK--NG  184 (295)
T ss_pred             HHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC--Cc
Confidence            9999999999999999999999999988764321000000000112345799999999999999999999975543  44


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHH
Q 021258          169 HNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSI  248 (315)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~  248 (315)
                      ....+   ..+.+...+....+++..     ...+++.|..+++.++.+.+++.++++++|+.+|+++++..+++|++++
T Consensus       185 ~~~~~---~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~  256 (295)
T PRK11689        185 ITLFF---ILTALALWIKYFLSPQPA-----MVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSA  256 (295)
T ss_pred             hhHHH---HHHHHHHHHHHHHhcCcc-----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHH
Confidence            33322   222233333222232211     1234456666667777788899999999999999999999999999999


Q ss_pred             HHHHHHccCCCcchhhhhHHHHHHHHHhhhhhcc
Q 021258          249 VLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  282 (315)
Q Consensus       249 ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~  282 (315)
                      +++++++||++++.+++|.++++.|+++.....|
T Consensus       257 i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        257 ALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             HHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            9999999999999999999999999877765443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.93  E-value=9.9e-24  Score=188.32  Aligned_cols=243  Identities=15%  Similarity=0.083  Sum_probs=191.1

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHH-HHHHHHHhhHhcccCchHHHHHHhhcchHHHHHH
Q 021258           12 FKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMS-NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIW   90 (315)
Q Consensus        12 f~~p~~lt~~q~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll   90 (315)
                      ...|..+++.|++.+.+...+..+++    +++++++.++..+.+ ..+...+.+.|++|++.+...++.++.|++++++
T Consensus        15 ~~~~~~~~~~r~~~~~l~l~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~   90 (260)
T TIGR00950        15 QVPLYFAVFRRLIFALLLLLPLLRRR----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLL   90 (260)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHhc----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHH
Confidence            34588888999888887776654333    223455566666655 5677889999999999999999999999999999


Q ss_pred             HHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHH
Q 021258           91 GTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHN  170 (315)
Q Consensus        91 ~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~  170 (315)
                      +.+++|||++++++.+++++++|+.++...+   +       .+.+..|+++.++++++++.+.+..|+..++.+.++..
T Consensus        91 ~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~---~-------~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~  160 (260)
T TIGR00950        91 SDLMGKERPRKLVLLAAVLGLAGAVLLLSDG---N-------LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQ  160 (260)
T ss_pred             HHHHccCCCcHHHHHHHHHHHHhHHhhccCC---c-------ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHH
Confidence            9999999999999999999999998875331   1       13557899999999999999999999987665433434


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHH-HHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHH
Q 021258          171 QIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST-VATTSQFFISYTIRTFGALTFATIMTTRQLVSIV  249 (315)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~i  249 (315)
                      ...+.+.++.++..+.....++..      ..+...|..+++.++ ++.+++.++++++|+.++.+++++.+++|+++.+
T Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l  234 (260)
T TIGR00950       161 FTGWVLLLGALLLLPFAWFLGPNP------QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALL  234 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCC------CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence            444556677777766654433211      113344555566665 4577889999999999999999999999999999


Q ss_pred             HHHHHccCCCcchhhhhHHHHHHHH
Q 021258          250 LSCVWFRHPLSWEQCIGSIIVFGAL  274 (315)
Q Consensus       250 ls~l~f~e~~t~~~~iG~~lvl~gv  274 (315)
                      ++++++||++++.+++|.++++.|+
T Consensus       235 l~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       235 LGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            9999999999999999999999886

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.93  E-value=3.6e-24  Score=189.15  Aligned_cols=272  Identities=16%  Similarity=0.125  Sum_probs=217.6

Q ss_pred             ccccCCCCCcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCC--CCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHHH
Q 021258            2 RVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDP--VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLA   79 (315)
Q Consensus         2 ~~~~~~~~~~f~~p~~lt~~q~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l   79 (315)
                      .|||.+++.+|+...++...|++.+.+..+..-+.+-.+.++  +...|+++|+++++.+..+.+..+++|+++++++++
T Consensus        30 vNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~  109 (314)
T KOG1444|consen   30 VNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVF  109 (314)
T ss_pred             HHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccccccccCchHHHHH
Confidence            489999999998888888899998887766533222122221  445678999999999999999999999999999999


Q ss_pred             hhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHH
Q 021258           80 KCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDK  159 (315)
Q Consensus        80 ~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~  159 (315)
                      |...|+.+++.+.+++|+|+++..|.++..+.+|.......    |       ..++..|+.++...++..+.+.+..||
T Consensus       110 kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~----d-------~sf~~~gY~w~~~n~~~~a~~~v~~kk  178 (314)
T KOG1444|consen  110 KNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFT----D-------LSFNLRGYSWALANCLTTAAFVVYVKK  178 (314)
T ss_pred             hhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccc----c-------ceecchhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998766544    2       145666999999999999999988888


Q ss_pred             HHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhh---hhChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHH
Q 021258          160 LFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV---YHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTF  236 (315)
Q Consensus       160 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~  236 (315)
                      -.+..+.+.+++++|.++++.+.+....++.||+. ...+.   ..++..+..+.+.|+++....++.+.+.+..||++.
T Consensus       179 ~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~  257 (314)
T KOG1444|consen  179 SVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTT  257 (314)
T ss_pred             hhccccccceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccce
Confidence            77766677889999999999988877777778754 22221   123455666677788898889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhccccC
Q 021258          237 ATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE  285 (315)
Q Consensus       237 si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~~  285 (315)
                      ++++......+.+.+.+++|+++++..++|+.+-+.|=+.+++.+.++|
T Consensus       258 tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k  306 (314)
T KOG1444|consen  258 TIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKK  306 (314)
T ss_pred             eehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhc
Confidence            9999666666666666667779999999999997755445555554333

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.92  E-value=3.4e-23  Score=188.65  Aligned_cols=244  Identities=8%  Similarity=0.012  Sum_probs=171.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCCC--C-CCchhhH--HHHH-HHHHHHHHHhhHhcccCchHHHHHHhhcchHHHH
Q 021258           15 SLFLVFCNRLMTSAVSAGTLIASRKAID--P-VAPVYKY--CLVS-MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVM   88 (315)
Q Consensus        15 p~~lt~~q~l~~~l~~~~~~~~~~~~~~--~-~~~~~~~--~~~~-~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~   88 (315)
                      |..++++|++++.+++..++..++++.+  + .+++++.  ...+ +..+..+.+.++|++++|.+.+.++.++.|++++
T Consensus        35 ~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~  114 (296)
T PRK15430         35 ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNI  114 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence            8999999999998876655544332111  0 1122332  2244 4466778999999999999999999999999999


Q ss_pred             HHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCCh
Q 021258           89 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEI  168 (315)
Q Consensus        89 ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~  168 (315)
                      +++++++|||+++++|++++++++|+.++...+           +...    .+.++++++|+.+.+.+|+..++...+.
T Consensus       115 l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~-----------~~~~----~~~l~aa~~~a~~~i~~r~~~~~~~~~~  179 (296)
T PRK15430        115 VLGMIFLGERFRRMQWLAVILAICGVLVQLWTF-----------GSLP----IIALGLAFSFAFYGLVRKKIAVEAQTGM  179 (296)
T ss_pred             HHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHc-----------CCcc----HHHHHHHHHHHHHHHHHHhcCCCCchhH
Confidence            999999999999999999999999998876321           0111    3466678899999988877532211122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHH-HHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHH
Q 021258          169 HNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDC-FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVS  247 (315)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~  247 (315)
                      .....+..+++.+...+.  .....    .....++.. +..+++.++.+.+++.++++++++.+|.+++++.+++|+++
T Consensus       180 ~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a  253 (296)
T PRK15430        180 LIETMWLLPVAAIYLFAI--ADSST----SHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLM  253 (296)
T ss_pred             HHHHHHHHHHHHHHHHHH--ccCCc----ccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            222333333333222111  11110    001122322 23334446677889999999999999999999999999999


Q ss_pred             HHHHHHHccCCCcchhhhhHHHHHHHHHhhhh
Q 021258          248 IVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  279 (315)
Q Consensus       248 ~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~  279 (315)
                      ++++++++||++++.+++|+++++.|+.+...
T Consensus       254 ~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        254 FLLAVTFYGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999876555443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.92  E-value=7.7e-23  Score=186.05  Aligned_cols=246  Identities=10%  Similarity=0.031  Sum_probs=181.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHHHH
Q 021258           14 YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTL   93 (315)
Q Consensus        14 ~p~~lt~~q~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~l   93 (315)
                      .|..++++|++++.+++.+..+.++.+. ++++++..+..|++......+.++|++|+|.+.++++.++.|+++++++  
T Consensus        39 ~~~~~~~~R~~~a~l~l~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~--  115 (293)
T PRK10532         39 GAPGVTALRLALGTLILIAIFKPWRLRF-AKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS--  115 (293)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhHHhccC-CHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh--
Confidence            4888999999999988776553333222 2345556677888877778889999999999999999999999988776  


Q ss_pred             HhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHH
Q 021258           94 IMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIF  173 (315)
Q Consensus        94 ~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~  173 (315)
                        +||+.+.  ..+.++++|+.++...+.  +      ....+..|+++.+.++++++++.+..||..+++  ++... .
T Consensus       116 --~~~~~~~--~~~~i~~~Gv~li~~~~~--~------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~--~~~~~-~  180 (293)
T PRK10532        116 --SRRPVDF--VWVVLAVLGLWFLLPLGQ--D------VSHVDLTGAALALGAGACWAIYILSGQRAGAEH--GPATV-A  180 (293)
T ss_pred             --cCChHHH--HHHHHHHHHHheeeecCC--C------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccC--CchHH-H
Confidence              3555544  456678899887653211  1      013356799999999999999999999886553  34444 4


Q ss_pred             HHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHH-HHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHH
Q 021258          174 YTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST-VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSC  252 (315)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~  252 (315)
                      +...++.+...+.....+..      ...+...|..++++++ ++.+++.++++++++.+|.+++++.+++|+++.++++
T Consensus       181 ~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~  254 (293)
T PRK10532        181 IGSLIAALIFVPIGALQAGE------ALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGM  254 (293)
T ss_pred             HHHHHHHHHHHHHHHHccCc------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHH
Confidence            55566666665654333210      0123334544556665 4567778899999999999999999999999999999


Q ss_pred             HHccCCCcchhhhhHHHHHHHHHhhhhhccc
Q 021258          253 VWFRHPLSWEQCIGSIIVFGALYTRSFFKKV  283 (315)
Q Consensus       253 l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~  283 (315)
                      +++||++++.+++|.+++++|+....+..+|
T Consensus       255 l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        255 IFLGETLTLIQWLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             HHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999999999999999999988777655443

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.91  E-value=5.8e-25  Score=189.10  Aligned_cols=259  Identities=20%  Similarity=0.318  Sum_probs=199.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHHHHHHHhhHhccc-CchHHHHHHhhcchHHHHHHHHH
Q 021258           15 SLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKY-VSFPVQTLAKCAKMIPVMIWGTL   93 (315)
Q Consensus        15 p~~lt~~q~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~al~~-v~~~~~~~l~~~~p~~~~ll~~l   93 (315)
                      -+.+|+.|+++.+.-.+++. -+-...+++.|.|+|...-..++..+.++|+++++ ++.|.++++|+..++.+|+++++
T Consensus        33 gNLITFaqFlFia~eGlif~-skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~i  111 (330)
T KOG1583|consen   33 GNLITFAQFLFIATEGLIFT-SKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWI  111 (330)
T ss_pred             eeehHHHHHHHHHHhceeee-ccccccCCCCchhhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHH
Confidence            46899999998888877664 12234467899999998777778889999999998 89999999999999999999999


Q ss_pred             HhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCC-----CC--CC--CchhhHHHHHHHHHHhhhhhHHHHHHHHccC
Q 021258           94 IMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY-----SK--GR--ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY  164 (315)
Q Consensus        94 ~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~-----~~--~~--~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~  164 (315)
                      +.+||++.+|+.++++.++|+++....+.. |..+.     .+  ..  .....|+.++.++.+.+|...++||..+|||
T Consensus       112 l~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~-d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~ky  190 (330)
T KOG1583|consen  112 LLGKRYSLRQYSSVLMITIGIIICTLFSSK-DGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKY  190 (330)
T ss_pred             hccceeehhhhhhHHhhhhhheeEEeecCc-chhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999887775432 22220     00  11  2234688889999999999999999999999


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhCh--------HHHHHHHHHHHHHHHHHHH-HH---HHHhhhC
Q 021258          165 DMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHL--------DCFFDVALLSTVATTSQFF-IS---YTIRTFG  232 (315)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~~~~~~~~~-~~---~~~~~~~  232 (315)
                      +-++.|.+||....+.+.++.   ..++..+.+.....++        ...+.....-++..+.|+. +-   ....+++
T Consensus       191 GKh~~EalFytH~LsLP~Flf---~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~  267 (330)
T KOG1583|consen  191 GKHWKEALFYTHFLSLPLFLF---MGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETS  267 (330)
T ss_pred             cCChHHHHHHHHHhccchHHH---hcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceec
Confidence            999999999999988655432   2344433333221111        0122223334566777753 32   2357889


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhh
Q 021258          233 ALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  278 (315)
Q Consensus       233 a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~  278 (315)
                      +.+++++.++|+.+++++|.+.|++++++++|+|..++++|-.++.
T Consensus       268 sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  268 SLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA  313 (330)
T ss_pred             ceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998755444

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.91  E-value=2.2e-23  Score=181.86  Aligned_cols=257  Identities=14%  Similarity=0.211  Sum_probs=209.4

Q ss_pred             CCcccchhHHHHHHHHHHHHHHHHHHHhhcCCC---CCCCchhhHH----HHHHHHHHHHHHhhHhcccCchHHHHHHhh
Q 021258            9 NEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAI---DPVAPVYKYC----LVSMSNILTTTCQYEALKYVSFPVQTLAKC   81 (315)
Q Consensus         9 ~~~f~~p~~lt~~q~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~l~~~al~~v~~~~~~~l~~   81 (315)
                      +.+|++|++++.+|+++-++++..+.+..+.+.   +....|++++    +.+++.+....+.|+|++|++.+.+++.|+
T Consensus        39 ~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KS  118 (349)
T KOG1443|consen   39 TKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKS  118 (349)
T ss_pred             hcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccc
Confidence            456999999999999999999876655433322   2245666665    888888999999999999999999999999


Q ss_pred             cchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHH
Q 021258           82 AKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLF  161 (315)
Q Consensus        82 ~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~  161 (315)
                      +.++|+.+.+..+--||+++.-.+.++++.+|+.++++++           .+++..|..+++.+.++.|++..+.++++
T Consensus       119 Ssi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks-----------Tqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll  187 (349)
T KOG1443|consen  119 SSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS-----------TQFNIEGFFLVLAASLLSGLRWAFTQMLL  187 (349)
T ss_pred             cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc-----------cceeehhHHHHHHHHHhhhhhHHHHHHHH
Confidence            9999999999887779999999999999999999988763           25788999999999999999999999998


Q ss_pred             ccCC---CChHHHHHHHHHHHHHHHHHH-HHHhCchh----HHhHhhhhCh-HHHHHHHHHHHHHHHHHH---HHHHHHh
Q 021258          162 KGYD---MEIHNQIFYTTLCSCVLSLSG-LILEGHLF----LAIDFVYHHL-DCFFDVALLSTVATTSQF---FISYTIR  229 (315)
Q Consensus       162 ~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~-~~~~~l~~~~~~~~~~~~---~~~~~~~  229 (315)
                      ++.+   .+|...+++.+++..+.++|. +.++|...    +.+++  +++ ..+..+...+.++..+..   +-+....
T Consensus       188 ~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~--~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~  265 (349)
T KOG1443|consen  188 RNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRF--QDTGLILRVIGLISLGGLLAFLLEFSEFLLLS  265 (349)
T ss_pred             hcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHh--cCccHHHHHHHHHHHHHHHHHHHHHHHHheee
Confidence            7654   578999999999888777775 55666422    22222  222 345555555555555543   3455789


Q ss_pred             hhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhh
Q 021258          230 TFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  278 (315)
Q Consensus       230 ~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~  278 (315)
                      +++..+.|+++..+.+.+.+++..+.+|.++..+|.|..+.+.|+.++.
T Consensus       266 ~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~  314 (349)
T KOG1443|consen  266 RTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR  314 (349)
T ss_pred             eccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999884

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.87  E-value=1.2e-21  Score=163.76  Aligned_cols=277  Identities=13%  Similarity=0.121  Sum_probs=212.7

Q ss_pred             ccccCCCCCcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHHHhh
Q 021258            2 RVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKC   81 (315)
Q Consensus         2 ~~~~~~~~~~f~~p~~lt~~q~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~   81 (315)
                      ||+|..+..+|+-...+.++|.+++.+-+.+.-+.+-...+ ..+.|+|++++++....++....+++|++++.++++|.
T Consensus        24 tNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR-~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKN  102 (309)
T COG5070          24 TNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR-LTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKN  102 (309)
T ss_pred             hhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee-hhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhcc
Confidence            79999999999999999999999998876664433322233 45678899999999999999999999999999999999


Q ss_pred             cchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHH
Q 021258           82 AKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLF  161 (315)
Q Consensus        82 ~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~  161 (315)
                      ...+.++..+.++++.|.+.....+.++++..-....++|.+    ........-..|++++...++..+.+....++-.
T Consensus       103 ltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q----~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri  178 (309)
T COG5070         103 LTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQ----ASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRI  178 (309)
T ss_pred             ceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhh----HHHHHhcccCCceEEEehhhHhHHHHHHHHHHhh
Confidence            999999999999999999999999999999998877776431    1110012334688888888887777665444433


Q ss_pred             ccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhh-hhChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHH
Q 021258          162 KGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV-YHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM  240 (315)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~  240 (315)
                      |-.+....+.|+|.+..+.++++...+...|+... +.. ...+.....++..++|+....++--++.+.+++++.|+++
T Consensus       179 ~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvG  257 (309)
T COG5070         179 KLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVG  257 (309)
T ss_pred             cccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHH
Confidence            32234457899999999998887765554443221 111 1234455566677888877778888899999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCCcchhhhhHHHHHH-HHHhhhhhccccC
Q 021258          241 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFG-ALYTRSFFKKVSE  285 (315)
Q Consensus       241 ~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~-gv~~~~~~k~~~~  285 (315)
                      .+++.-..+-|.++|||+.+...+..+.+-.. |++| .+.|.+|+
T Consensus       258 ALNKlp~alaGlvffdap~nf~si~sillGflsg~iY-avaks~k~  302 (309)
T COG5070         258 ALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIY-AVAKSKKQ  302 (309)
T ss_pred             HhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence            99999999999999999999999999999764 5444 44554443

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.85  E-value=1.4e-19  Score=163.67  Aligned_cols=240  Identities=12%  Similarity=0.089  Sum_probs=164.9

Q ss_pred             HHHHHHHHHHHHHHHHHhh--cCCCC-CCCchhhHH-HHHHHHHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHHHHH
Q 021258           19 VFCNRLMTSAVSAGTLIAS--RKAID-PVAPVYKYC-LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLI   94 (315)
Q Consensus        19 t~~q~l~~~l~~~~~~~~~--~~~~~-~~~~~~~~~-~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~l~   94 (315)
                      ++.+.....+...+...++  ++..+ +++.++..+ ..++.......+.+.|+++.+.+....+.++.|++++++++++
T Consensus        31 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~  110 (281)
T TIGR03340        31 LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLT  110 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHH
Confidence            4556555655555554433  21111 122333343 3444567778899999999999999899999999999999999


Q ss_pred             hccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChH-HHHH
Q 021258           95 MQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIH-NQIF  173 (315)
Q Consensus        95 ~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~-~~~~  173 (315)
                      +|||+++++|+++.++++|+.++..++   +       ...+..|+.+.+.++++++++.+..|+..++.  ++. ....
T Consensus       111 ~~e~~~~~~~~g~~~~~~Gv~ll~~~~---~-------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~--~~~~~~~~  178 (281)
T TIGR03340       111 LGETLSPLAWLGILIITLGLLVLGLSR---F-------AQHRRKAYAWALAAALGTAIYSLSDKAAALGV--PAFYSALG  178 (281)
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHhccc---c-------cccchhHHHHHHHHHHHHHHhhhhccccccch--hcccccHH
Confidence            999999999999999999998876431   1       11234678788899999999988766543222  221 1112


Q ss_pred             HHHHHHHHHH-HHHHHH---hCchhHHhHhhhhChHHHHHHHHH-HHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHH
Q 021258          174 YTTLCSCVLS-LSGLIL---EGHLFLAIDFVYHHLDCFFDVALL-STVATTSQFFISYTIRTFGALTFATIMTTRQLVSI  248 (315)
Q Consensus       174 ~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~  248 (315)
                      +. .++.+.. .+....   .++.    .. ...+..+..+++. ++++.+++.++++++++.++.+++...+++|+++.
T Consensus       179 ~~-~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~  252 (281)
T TIGR03340       179 YL-GIGFLAMGWPFLLLYLKRHGR----SM-FPYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAV  252 (281)
T ss_pred             HH-HHHHHHHHHHHHHHHHHHhcc----ch-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHH
Confidence            21 1222221 222111   1110    00 0111222233343 56677889999999999999999999999999999


Q ss_pred             HHHHHHccCCCcchhhhhHHHHHHHHHh
Q 021258          249 VLSCVWFRHPLSWEQCIGSIIVFGALYT  276 (315)
Q Consensus       249 ils~l~f~e~~t~~~~iG~~lvl~gv~~  276 (315)
                      ++|++++||++++.+++|.++++.|+++
T Consensus       253 l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       253 VLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            9999999999999999999999999864

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.85  E-value=1.5e-18  Score=155.80  Aligned_cols=275  Identities=15%  Similarity=0.219  Sum_probs=201.7

Q ss_pred             ccCCCCCcccc-hhHHHHHHHHHHHHHHHHHHHhhc----CCCCC---------CCchhhHHHHHHHHHHHHHHhhHhcc
Q 021258            4 PYGADNEYFKY-SLFLVFCNRLMTSAVSAGTLIASR----KAIDP---------VAPVYKYCLVSMSNILTTTCQYEALK   69 (315)
Q Consensus         4 ~~~~~~~~f~~-p~~lt~~q~l~~~l~~~~~~~~~~----~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~al~   69 (315)
                      +|....++++| |...+++-.++..++|...+++..    ++..+         +++..+....++++++.+-+.+.++.
T Consensus        35 ~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYalqNnl~yval~  114 (345)
T KOG2234|consen   35 RYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYALQNNLQYVALS  114 (345)
T ss_pred             HHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHHhhhHHHHHHh
Confidence            44445554444 888889989999999887665442    11110         11233456778899999999999999


Q ss_pred             cCchHHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCC-CCCCCchhhHHHHHHHHHH
Q 021258           70 YVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY-SKGRENTVWGVSLMVGYLG  148 (315)
Q Consensus        70 ~v~~~~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~-~~~~~~~~~G~~~~~~s~~  148 (315)
                      +++.+++++....+.+.|++++.++++||.+++||.++++.+.|+.+....... +..+. .....+.+.|...++.+++
T Consensus       115 ~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~-~~~a~~~~~~~n~~~G~~avl~~c~  193 (345)
T KOG2234|consen  115 NLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS-PTGAKSESSAQNPFLGLVAVLVACF  193 (345)
T ss_pred             cCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC-CCCccCCCcccchhhhHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999988732111 11111 1124678899999999999


Q ss_pred             hhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhC-chhHHhHhhh-hChHHHHHHHHHHHHHHHHHHHHHH
Q 021258          149 FDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEG-HLFLAIDFVY-HHLDCFFDVALLSTVATTSQFFISY  226 (315)
Q Consensus       149 ~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~  226 (315)
                      ++++..++.||++|+.+.+.+........++.++.+......+ +-....++.+ ++...|..++.    .+++.++...
T Consensus       194 ~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~----~a~gGLlvs~  269 (345)
T KOG2234|consen  194 LSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLL----NAVGGLLVSL  269 (345)
T ss_pred             HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHH----HhccchhHHH
Confidence            9999999999999987766666666666777777766544432 2110112222 22333433333    3444455666


Q ss_pred             HHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhccc
Q 021258          227 TIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV  283 (315)
Q Consensus       227 ~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~  283 (315)
                      .+|+.+-..-.-...+..+++.+.|+.+||-++|.....|..+|+.++.++...+.+
T Consensus       270 v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~  326 (345)
T KOG2234|consen  270 VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR  326 (345)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence            778888888888888888999999999999999999999999999999888744443

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.84  E-value=5.2e-18  Score=152.93  Aligned_cols=248  Identities=18%  Similarity=0.176  Sum_probs=177.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCchhhHHH-HHHHHHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHHH
Q 021258           15 SLFLVFCNRLMTSAVSAGTLIASRK-AIDPVAPVYKYCL-VSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGT   92 (315)
Q Consensus        15 p~~lt~~q~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~   92 (315)
                      +....+.|.+.+.+........++. +.+...+++..+. .++.......+.+.++++++.+.++++.++.|+++.+++.
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~  115 (292)
T COG0697          36 FLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAV  115 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence            4455555887777763333222211 2222223333444 4445677789999999999999999999999999999997


Q ss_pred             -HHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHH
Q 021258           93 -LIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQ  171 (315)
Q Consensus        93 -l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~  171 (315)
                       +++|||++++++.++++.++|+.++...+..      + .+. ...|+.+.+.+.++++++.+..|++.   +.++...
T Consensus       116 ~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~------~-~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~---~~~~~~~  184 (292)
T COG0697         116 LLLLGERLSLLQILGILLALAGVLLILLGGGG------G-GIL-SLLGLLLALAAALLWALYTALVKRLS---RLGPVTL  184 (292)
T ss_pred             HHHccCCCcHHHHHHHHHHHHhHHheecCCCc------c-hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc---CCChHHH
Confidence             6679999999999999999999988754210      0 011 57899999999999999999998876   3344444


Q ss_pred             HH-HHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHH-HHHHHHHHHHhhhChHHHHHHHHHHHHHHHH
Q 021258          172 IF-YTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT-TSQFFISYTIRTFGALTFATIMTTRQLVSIV  249 (315)
Q Consensus       172 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~a~~~si~~~l~~v~~~i  249 (315)
                      .. +..........+.. .. +.    + .......+..+.+.++++. +++.++++++++.++...++..+++|+++.+
T Consensus       185 ~~~~~~~~~~~~~~~~~-~~-~~----~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  257 (292)
T COG0697         185 ALLLQLLLALLLLLLFF-LS-GF----G-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAAL  257 (292)
T ss_pred             HHHHHHHHHHHHHHHHH-hc-cc----c-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence            44 22221111111111 11 10    0 1123344556666666544 6899999999999999999999999999999


Q ss_pred             HHHHHccCCCcchhhhhHHHHHHHHHhhhhh
Q 021258          250 LSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  280 (315)
Q Consensus       250 ls~l~f~e~~t~~~~iG~~lvl~gv~~~~~~  280 (315)
                      +++++++|+++..+++|..+++.|+.+...+
T Consensus       258 ~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         258 LGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999998887765

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.84  E-value=5.1e-22  Score=170.26  Aligned_cols=265  Identities=15%  Similarity=0.138  Sum_probs=197.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHHHH
Q 021258           15 SLFLVFCNRLMTSAVSAGTLIASRKAI-DPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTL   93 (315)
Q Consensus        15 p~~lt~~q~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~l   93 (315)
                      |..+.-.|+++-.++.++-+.+++... -++-..+..+++|+..+.+..+.|+|++|++.+.++++..++|.+|.++++.
T Consensus        64 p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~  143 (346)
T KOG4510|consen   64 PMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWA  143 (346)
T ss_pred             hhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHH
Confidence            445555555555544444333333211 1222333456899999999999999999999999999999999999999999


Q ss_pred             HhccccChhhHHHHHHHHHhHHHHhcCCC--CCCCCCCC-CCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHH
Q 021258           94 IMQKRYKGYDYFLALLVTLGCSIFILFPS--GADLSPYS-KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHN  170 (315)
Q Consensus        94 ~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~--~~~~~~~~-~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~  170 (315)
                      ++|||+++.+.++....+.||+++...+-  +++.++.+ ++.+.+.+|-...+.+.+.-+...+..+++-|+  .+..-
T Consensus       144 ~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~--~h~~m  221 (346)
T KOG4510|consen  144 FLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKN--AHAIM  221 (346)
T ss_pred             HHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhcc--ccEEE
Confidence            99999999999999999999998876432  11111111 112556778777777777766666777777554  44555


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHH
Q 021258          171 QIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVL  250 (315)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~il  250 (315)
                      .+-|+...+++..+..+..-|++.    . .+..+.|+..+-+|+++.++|++.+.++|+-.|...++..+...+++.++
T Consensus       222 svsyf~~i~lV~s~I~~~~ig~~~----l-P~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~w  296 (346)
T KOG4510|consen  222 SVSYFSLITLVVSLIGCASIGAVQ----L-PHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFW  296 (346)
T ss_pred             EehHHHHHHHHHHHHHHhhcccee----c-CccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHH
Confidence            677888888887776654444321    1 23344555566679999999999999999999999999999999999999


Q ss_pred             HHHHccCCCcchhhhhHHHHHHHHHhhhhhccccCC
Q 021258          251 SCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEK  286 (315)
Q Consensus       251 s~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~~~  286 (315)
                      -+++|+|.+++++|+|+++++++.+.....|..+++
T Consensus       297 qv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa~~~  332 (346)
T KOG4510|consen  297 QVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWAGTN  332 (346)
T ss_pred             HHHHhcCCChHHHhhceeeeehhHHHHHHHHHhccc
Confidence            999999999999999999999988887766655544

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.83  E-value=1.1e-21  Score=168.61  Aligned_cols=277  Identities=15%  Similarity=0.140  Sum_probs=218.8

Q ss_pred             cccCCCC--CcccchhHHHHHHHHHHHHHHHHHHHhhcC-----CCC-CCCc---hhhHHHHHHHHHHHHHHhhHhcccC
Q 021258            3 VPYGADN--EYFKYSLFLVFCNRLMTSAVSAGTLIASRK-----AID-PVAP---VYKYCLVSMSNILTTTCQYEALKYV   71 (315)
Q Consensus         3 ~~~~~~~--~~f~~p~~lt~~q~l~~~l~~~~~~~~~~~-----~~~-~~~~---~~~~~~~~~~~~~~~~l~~~al~~v   71 (315)
                      |+|-.+.  ...+.|.++++.|+++...++...-...++     ..+ .+.+   .++.++.++.+.+++..+|+.++|+
T Consensus        47 nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yV  126 (347)
T KOG1442|consen   47 NKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYV  126 (347)
T ss_pred             HHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhc
Confidence            3444444  677889999999999999888765443221     111 1111   2456788999999999999999999


Q ss_pred             chHHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhh
Q 021258           72 SFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDG  151 (315)
Q Consensus        72 ~~~~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a  151 (315)
                      +++.+-+-|+...+|+.+++++++|+|-+..-..+..++++|--+ . .    |.++.  .+..++.|.++...|.++-|
T Consensus       127 gVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l-G-v----dqE~~--~~~ls~~GvifGVlaSl~vA  198 (347)
T KOG1442|consen  127 GVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL-G-V----DQEGS--TGTLSWIGVIFGVLASLAVA  198 (347)
T ss_pred             ceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee-c-c----ccccc--cCccchhhhHHHHHHHHHHH
Confidence            999999999999999999999999999999999888888888432 1 1    22221  24788999999999999999


Q ss_pred             hhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhh-ChHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021258          152 FTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH-HLDCFFDVALLSTVATTSQFFISYTIRT  230 (315)
Q Consensus       152 ~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~  230 (315)
                      +..++.+|.....+...+.+..|++..++++++|.+.+.||+.+-+++.+. +.+.|..+.+.|++++.-++.-..-+|.
T Consensus       199 lnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~  278 (347)
T KOG1442|consen  199 LNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKV  278 (347)
T ss_pred             HHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEe
Confidence            999998877665555678999999999999999999999998776665433 3456666555566665555444455899


Q ss_pred             hChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhccccCCC
Q 021258          231 FGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKP  287 (315)
Q Consensus       231 ~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~~~~  287 (315)
                      +||.+.++-++.|.....++++.+++|.-+..-|-|-++++.|-..+.+-|+.+.+|
T Consensus       279 TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~  335 (347)
T KOG1442|consen  279 TSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRK  335 (347)
T ss_pred             cccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999998888887777655433

>TIGR00688 rarD rarD protein

Probab=99.82  E-value=5.8e-18  Score=151.05  Aligned_cols=218  Identities=8%  Similarity=0.005  Sum_probs=152.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcCC------CCC--CCc-hhhHHHHHHHHHHHHHHhhHhcccCchHHHHHHhhcch
Q 021258           14 YSLFLVFCNRLMTSAVSAGTLIASRKA------IDP--VAP-VYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKM   84 (315)
Q Consensus        14 ~p~~lt~~q~l~~~l~~~~~~~~~~~~------~~~--~~~-~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p   84 (315)
                      .|..++++|++++.++..+++..++++      .++  +++ +..+...|++......+.++|+++++.+.++++.++.|
T Consensus        28 ~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~P  107 (256)
T TIGR00688        28 PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINP  107 (256)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHH
Confidence            589999999999988766655333221      111  111 11234567777888899999999999999999999999


Q ss_pred             HHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccC
Q 021258           85 IPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY  164 (315)
Q Consensus        85 ~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~  164 (315)
                      +++++++++++|||++++++++++++++|+.++...+           .+..    .+.+.++++++.+.+..|+..++ 
T Consensus       108 i~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~-----------~~~~----~~~l~aa~~~a~~~i~~~~~~~~-  171 (256)
T TIGR00688       108 LVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK-----------GSLP----WEALVLAFSFTAYGLIRKALKNT-  171 (256)
T ss_pred             HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc-----------CCch----HHHHHHHHHHHHHHHHHhhcCCC-
Confidence            9999999999999999999999999999998775421           0111    24567889999999888876432 


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhCh-HHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHH
Q 021258          165 DMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHL-DCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTR  243 (315)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~  243 (315)
                        +..+.... .....+...+.....+.. . .+  ..++ ..|..+++.++++.+++.++.+++|+.+|.++++..+++
T Consensus       172 --~~~~~~~~-~~~~~~~~~~~~~~~~~~-~-~~--~~~~~~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~  244 (256)
T TIGR00688       172 --DLAGFCLE-TLSLMPVAIYYLLQTDFA-T-VQ--QTNPFPIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIG  244 (256)
T ss_pred             --CcchHHHH-HHHHHHHHHHHHHHhccC-c-cc--ccCchhHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence              22222221 122222222211111110 0 00  1122 256666777778889999999999999999999999999


Q ss_pred             HHHHHHHHHHH
Q 021258          244 QLVSIVLSCVW  254 (315)
Q Consensus       244 ~v~~~ils~l~  254 (315)
                      |+++.++++++
T Consensus       245 Pv~~~~~~~~~  255 (256)
T TIGR00688       245 PTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHh
Confidence            99999999864

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.81  E-value=4e-18  Score=150.35  Aligned_cols=223  Identities=16%  Similarity=0.263  Sum_probs=172.3

Q ss_pred             CCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCC
Q 021258           44 VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSG  123 (315)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~  123 (315)
                      +++..++.+.++++.+.+.+.+.++++++++++.+++.++.++|++++++++|||.+++||.++.+.++|+++....+..
T Consensus        14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            34556778899999999999999999999999999999999999999999999999999999999999999987765432


Q ss_pred             CCCC-CCCC-----CCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHh-CchhHH
Q 021258          124 ADLS-PYSK-----GRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILE-GHLFLA  196 (315)
Q Consensus       124 ~~~~-~~~~-----~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  196 (315)
                      ++.. ++..     .......|+++++.++++.|+..++.||++|+.+.+.+........++.++.++..... ++....
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~  173 (244)
T PF04142_consen   94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISE  173 (244)
T ss_pred             ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence            2100 0000     12346799999999999999999999999998776666666677777777776654332 211111


Q ss_pred             hHhh-hhChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHH
Q 021258          197 IDFV-YHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV  270 (315)
Q Consensus       197 ~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lv  270 (315)
                      ..++ ..++..|.    ..+..+++.+.....+|+.+...-+....+..+++.++++++||.+++....+|..+|
T Consensus       174 ~g~f~G~~~~~~~----~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  174 SGFFHGYSWWVWI----VIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             CCchhhcchHHHH----HHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            1111 12222232    2234455666777889999999999999999999999999999999999999998764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.78  E-value=3.8e-17  Score=141.33  Aligned_cols=266  Identities=15%  Similarity=0.108  Sum_probs=195.5

Q ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHhhcCCC-------------CCCCchhh--HHHHHHHHHHHHHHhhHhcccCchH
Q 021258           10 EYFKYSLFLVFCNRLMTSAVSAGTLIASRKAI-------------DPVAPVYK--YCLVSMSNILTTTCQYEALKYVSFP   74 (315)
Q Consensus        10 ~~f~~p~~lt~~q~l~~~l~~~~~~~~~~~~~-------------~~~~~~~~--~~~~~~~~~~~~~l~~~al~~v~~~   74 (315)
                      ..|++|..-+.+.++--++++..+..+|++..             +.+.|++.  +++.+++...+..+.|.++.+++.+
T Consensus        34 pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di~gsslm~vgL~lTsAS  113 (372)
T KOG3912|consen   34 PGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDIAGSSLMYVGLNLTSAS  113 (372)
T ss_pred             CccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHHhhhHHHHHHHHHhhHH
Confidence            34999988887777766666665555443210             11224443  4578999999999999999999999


Q ss_pred             HHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhH
Q 021258           75 VQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTS  154 (315)
Q Consensus        75 ~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~  154 (315)
                      .+.++|-...+||.+++..+++++++.+||+++..+..|++++...|-+.+..+.+ .-..-..|.++.+++.++-|...
T Consensus       114 sfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~-d~s~iitGdllIiiaqiivaiQ~  192 (372)
T KOG3912|consen  114 SFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYT-DYSSIITGDLLIIIAQIIVAIQM  192 (372)
T ss_pred             HHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcc-ccccchhhhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998887664432211111 01455789999999999999999


Q ss_pred             HHHHHHHccCCCChHHHHHHHHHHHHHHHHHH-H---HH-hCc------------hhHHhHhhhhChHHHHHHHHHHH--
Q 021258          155 TFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSG-L---IL-EGH------------LFLAIDFVYHHLDCFFDVALLST--  215 (315)
Q Consensus       155 v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~-~~~------------~~~~~~~~~~~~~~~~~l~~~~~--  215 (315)
                      +..||.+++++.+|.+...|...++.+++... .   .+ .++            +...+.-.+..|...  +...+.  
T Consensus       193 v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~--val~~~~v  270 (372)
T KOG3912|consen  193 VCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLA--VALIGFTV  270 (372)
T ss_pred             HHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhH--HHHhhhhh
Confidence            99999999999999999999999986554222 1   11 121            111111112223221  222222  


Q ss_pred             HHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhh
Q 021258          216 VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  278 (315)
Q Consensus       216 ~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~  278 (315)
                      ..++-++.-.+..|..|+++-.+...++..+..+++....-|.+...|+.|.++.+.|+.+++
T Consensus       271 SiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  271 SIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             heeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            122223344456899999999999999999999999999999999999999999988876654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.72  E-value=2.7e-15  Score=136.24  Aligned_cols=239  Identities=9%  Similarity=0.065  Sum_probs=167.1

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCCCchhhHH----HHHHHHHHHHHHhhHhcccCchHHHHHHhh-cchHHHHHHHHHHhc
Q 021258           22 NRLMTSAVSAGTLIASRKAIDPVAPVYKYC----LVSMSNILTTTCQYEALKYVSFPVQTLAKC-AKMIPVMIWGTLIMQ   96 (315)
Q Consensus        22 q~l~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~al~~v~~~~~~~l~~-~~p~~~~ll~~l~~~   96 (315)
                      ++.++.++...+....+..  + .+.+..+    .-|++...++.+.+.|.++++.+.++.+.+ ..+++..+.+.+++|
T Consensus        33 ~~~~g~l~~~~~~~~~~~~--~-~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~  109 (290)
T TIGR00776        33 GTTFGALILSIAIAIFVLP--E-FWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFG  109 (290)
T ss_pred             HHHHHHHHHHHHHHHHhCC--c-ccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhh
Confidence            5666666655443333321  1 1222332    345557788899999999999998877777 777788899999999


Q ss_pred             cccChhh----HHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHH
Q 021258           97 KRYKGYD----YFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQI  172 (315)
Q Consensus        97 ~~~~~~~----~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~  172 (315)
                      |+.++++    +++++++++|+.++...+.  + +.+.++..+...|+++.+++.++|+++.+..|+.    +.++.+..
T Consensus       110 e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~--~-~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~  182 (290)
T TIGR00776       110 EWSTSIQTLLGLLALILIIIGVYLTSRSKD--K-SAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVL  182 (290)
T ss_pred             hccchHHHHHHHHHHHHHHHhHheEEeccc--c-ccccccccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCcceeh
Confidence            9999999    9999999999988765421  1 1100000233679999999999999998887654    24566664


Q ss_pred             HHHHH----HHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHHHHHHHHHHHHh-hhChHHHHHHHHHHHHHH
Q 021258          173 FYTTL----CSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIR-TFGALTFATIMTTRQLVS  247 (315)
Q Consensus       173 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~a~~~si~~~l~~v~~  247 (315)
                      +.+..    .+.++..+.   ...  +  +.  .+...+..++ .++...+++.+++.+.+ +.++.++++..+++|+.+
T Consensus       183 ~~~~~g~~~~~~~~~~~~---~~~--~--~~--~~~~~~~~~~-~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia  252 (290)
T TIGR00776       183 LPQAIGMVIGGIIFNLGH---ILA--K--PL--KKYAILLNIL-PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIIS  252 (290)
T ss_pred             hHHHHHHHHHHHHHHHHH---hcc--c--ch--HHHHHHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHH
Confidence            44333    222222222   000  0  00  1112333333 66667788888888888 999999999999999999


Q ss_pred             HHHHHHHccCCCcchhh----hhHHHHHHHHHhhhhh
Q 021258          248 IVLSCVWFRHPLSWEQC----IGSIIVFGALYTRSFF  280 (315)
Q Consensus       248 ~ils~l~f~e~~t~~~~----iG~~lvl~gv~~~~~~  280 (315)
                      .++++++++|..++.++    +|.+++++|+.+....
T Consensus       253 ~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       253 TLGGILILGEKKTKREMIAISVGIILIIIAANILGIG  289 (290)
T ss_pred             HHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence            99999999999999999    9999999988776543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.71  E-value=7.7e-17  Score=144.75  Aligned_cols=230  Identities=13%  Similarity=0.055  Sum_probs=179.6

Q ss_pred             HHHHHHHHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCC
Q 021258           51 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS  130 (315)
Q Consensus        51 ~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~  130 (315)
                      +..+.+.+++++..|.||.|.+++..+++.+++-+||..++.++..+|+++.+.+++.+.+.|++++...|++. .  ++
T Consensus       163 l~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~-~--~~  239 (416)
T KOG2765|consen  163 LFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ-N--SD  239 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc-c--cc
Confidence            45667789999999999999999999999999999999999999999999999999999999999988775421 1  11


Q ss_pred             CCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccC--CCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHH
Q 021258          131 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY--DMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFF  208 (315)
Q Consensus       131 ~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (315)
                      ..+.....|.++.++++++||+|.++.||-..+.  +.|.....-|..++..++++|.+++-... ..-.|...+.....
T Consensus       240 ~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~-~~e~F~lP~~~q~~  318 (416)
T KOG2765|consen  240 LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF-GEERFELPSSTQFS  318 (416)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh-ccCcccCCCCceeE
Confidence            1245668999999999999999999988876655  35555555577778888888765432211 10111111111222


Q ss_pred             HHHHH-HHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhcccc
Q 021258          209 DVALL-STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS  284 (315)
Q Consensus       209 ~l~~~-~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~  284 (315)
                      .++.. .+.+.++-++|..+.-.++|..+++..++....+++...++-+.++++.+++|.+.|++|.++.++..+..
T Consensus       319 ~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~~  395 (416)
T KOG2765|consen  319 LVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSENS  395 (416)
T ss_pred             eeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccccc
Confidence            33343 44567788999999999999999999999999999999999999999999999999999988887665433

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.66  E-value=1.1e-17  Score=142.81  Aligned_cols=252  Identities=16%  Similarity=0.167  Sum_probs=189.8

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHH
Q 021258           12 FKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWG   91 (315)
Q Consensus        12 f~~p~~lt~~q~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~   91 (315)
                      -+.|..-+|+.+..-+++-..++.+|++.  .+..|+.|++.++...-++++--.|+||++....+++.+-....+++++
T Consensus        45 iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~--~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~ls  122 (336)
T KOG2766|consen   45 INAPTSQTFLNYVLLALVYGPIMLFRRKY--IKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLS  122 (336)
T ss_pred             CCCccHHHHHHHHHHHHHHhhHHHhhhHH--HHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHH
Confidence            55688889988766666656666666632  2345677899999988889888999999999888888888877899999


Q ss_pred             HHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHH
Q 021258           92 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQ  171 (315)
Q Consensus        92 ~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~  171 (315)
                      |+++|.|+++.++.|++++++|+.+++++|-+.   .+.+++.+-..|.++++.++-+||..++.+|.+.|+  .+..+.
T Consensus       123 w~fLktrYrlmki~gV~iCi~GvvmvV~sDV~a---gd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn--~d~~el  197 (336)
T KOG2766|consen  123 WFFLKTRYRLMKISGVVICIVGVVMVVFSDVHA---GDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKN--ADRVEL  197 (336)
T ss_pred             HHHHHHHHhhheeeeEEeEecceEEEEEeeecc---ccccCCCCCccCcEEEEecceeeeeccccHHHHHhc--CcHHHH
Confidence            999999999999999999999999988875421   111234566789999999999999999999998875  578899


Q ss_pred             HHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHH--HHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHH
Q 021258          172 IFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLS--TVATTSQFFISYTIRTFGALTFATIMTTRQLVSIV  249 (315)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~i  249 (315)
                      |....++++++..+-...+-......   +.+   +....+++  ++-++-.-+.-..+|..|++..++-.......+++
T Consensus       198 m~~lgLfGaIIsaIQ~i~~~~~~~tl---~w~---~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~  271 (336)
T KOG2766|consen  198 MGFLGLFGAIISAIQFIFERHHVSTL---HWD---SAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLL  271 (336)
T ss_pred             HHHHHHHHHHHHHHHHhhhccceeeE---eeh---HHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHH
Confidence            99999999998877644432211111   111   21122222  12222222333467889999888888888888888


Q ss_pred             HHHHHccCCCcchhhhhHHHHHHHHHhhh
Q 021258          250 LSCVWFRHPLSWEQCIGSIIVFGALYTRS  278 (315)
Q Consensus       250 ls~l~f~e~~t~~~~iG~~lvl~gv~~~~  278 (315)
                      +  ..||-+++|...+..+.+..|..++.
T Consensus       272 i--~~FgYhv~wLY~laF~~i~~GliiYs  298 (336)
T KOG2766|consen  272 I--RTFGYHVDWLYFLAFATIATGLIIYS  298 (336)
T ss_pred             H--HHHhcchhhhhHHHHHHHHHhhEEee
Confidence            8  78899999999999999999987774

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.66  E-value=1.5e-13  Score=120.45  Aligned_cols=249  Identities=12%  Similarity=0.067  Sum_probs=174.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCC---C-CCCchh--hHHHHHHHHHHHHHHhhHhcccCchHHHHHHhhcchHHHH
Q 021258           15 SLFLVFCNRLMTSAVSAGTLIASRKAI---D-PVAPVY--KYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVM   88 (315)
Q Consensus        15 p~~lt~~q~l~~~l~~~~~~~~~~~~~---~-~~~~~~--~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~   88 (315)
                      +..+..-|.+-+..+....+...|+..   + .++|.+  .+...+++.+.+....-+|.+.=..-.+.+-.+..|++.+
T Consensus        34 ~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~V  113 (293)
T COG2962          34 ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNV  113 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHH
Confidence            445666676666655554444333211   1 122221  2234455566667777788887544456677888899999


Q ss_pred             HHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCCh
Q 021258           89 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEI  168 (315)
Q Consensus        89 ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~  168 (315)
                      +++.+++|||+++.||+++++..+||..-.+..           ++..+....++    +.+++|....|+    .+.++
T Consensus       114 llG~lflkErls~~Q~iAV~lA~~GV~~~~~~~-----------g~lpwval~la----~sf~~Ygl~RK~----~~v~a  174 (293)
T COG2962         114 LLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL-----------GSLPWVALALA----LSFGLYGLLRKK----LKVDA  174 (293)
T ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-----------CCCcHHHHHHH----HHHHHHHHHHHh----cCCch
Confidence            999999999999999999999999998877642           24556555544    466777755433    35566


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhh-hChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHH
Q 021258          169 HNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY-HHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVS  247 (315)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~  247 (315)
                      .+-++.-..+-++..+.+.+..++-..   +.. .++..+..++..|..+++.-.++..+-|+.+=++.++..|.+|..-
T Consensus       175 ~~g~~lE~l~l~p~al~yl~~l~~~~~---~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~  251 (293)
T COG2962         175 LTGLTLETLLLLPVALIYLLFLADSGQ---FLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLM  251 (293)
T ss_pred             HHhHHHHHHHHhHHHHHHHHHHhcCch---hhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            555555545444444444333222111   222 3445566667778889999999999999999999999999999999


Q ss_pred             HHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhccccC
Q 021258          248 IVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE  285 (315)
Q Consensus       248 ~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~~  285 (315)
                      .+++++++||+++..+++..+.+-.|+.++.++.-+++
T Consensus       252 fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~  289 (293)
T COG2962         252 FLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTA  289 (293)
T ss_pred             HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999888876655444

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.64  E-value=1.1e-14  Score=119.43  Aligned_cols=141  Identities=18%  Similarity=0.255  Sum_probs=117.1

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHcc-----CCCChHHHHHHHHHHHHHHHHHHHHHhCchh--HHh-Hhhh----hChHH
Q 021258          139 GVSLMVGYLGFDGFTSTFQDKLFKG-----YDMEIHNQIFYTTLCSCVLSLSGLILEGHLF--LAI-DFVY----HHLDC  206 (315)
Q Consensus       139 G~~~~~~s~~~~a~~~v~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~----~~~~~  206 (315)
                      |.++++.|.++.+++.++.|+.+++     .+.++.++++|.++.++++++|..++.++..  +.. +...    .++..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6889999999999999999999887     5789999999999999999888765544322  111 1111    02344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhh
Q 021258          207 FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  279 (315)
Q Consensus       207 ~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~  279 (315)
                      +..++..++++.+.++..+..++++||.+.++++.+|.+..+++|+++|+|++|+.+++|+++.+.|.+.|+|
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            5555666778888899999999999999999999999999999999999999999999999999999888765

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.63  E-value=2.4e-13  Score=116.47  Aligned_cols=245  Identities=9%  Similarity=0.066  Sum_probs=174.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHHHHH
Q 021258           15 SLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLI   94 (315)
Q Consensus        15 p~~lt~~q~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~l~   94 (315)
                      |.=.|++|..++.+++....+=.+++.. +.+++..+..|......+.+.|.|++.+|.+++..+..+.|+.+.+++   
T Consensus        40 ~~g~t~lRl~~aaLIll~l~RPwr~r~~-~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~---  115 (292)
T COG5006          40 AAGVTALRLAIAALILLALFRPWRRRLS-KPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS---  115 (292)
T ss_pred             hhhHHHHHHHHHHHHHHHHhhHHHhccC-hhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh---
Confidence            5567999988888887655431222222 456667788999999999999999999999999999999999655433   


Q ss_pred             hccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHH
Q 021258           95 MQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFY  174 (315)
Q Consensus        95 ~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~  174 (315)
                       .||..-..|  +.+.+.|+.+..-..        ++..+.+..|..+.+.+..||++|-+..+|.-+.  .+...-+.+
T Consensus       116 -sRr~~d~vw--vaLAvlGi~lL~p~~--------~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~--~~g~~g~a~  182 (292)
T COG5006         116 -SRRLRDFVW--VALAVLGIWLLLPLG--------QSVWSLDPVGVALALGAGACWALYIVLGQRAGRA--EHGTAGVAV  182 (292)
T ss_pred             -ccchhhHHH--HHHHHHHHHhheecc--------CCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc--CCCchHHHH
Confidence             455444444  455666766553221        1124678899999999999999999988887532  233444556


Q ss_pred             HHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHH-HHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHH
Q 021258          175 TTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTV-ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCV  253 (315)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l  253 (315)
                      -..+++++.+|+......    ..+  .+|.....-+..+++ +.+-+.+-..++++.++.+.++...+||.++.+.|++
T Consensus       183 gm~vAaviv~Pig~~~ag----~~l--~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i  256 (292)
T COG5006         183 GMLVAALIVLPIGAAQAG----PAL--FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLI  256 (292)
T ss_pred             HHHHHHHHHhhhhhhhcc----hhh--cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHH
Confidence            666777777776443221    111  344444333444444 4556667778999999999999999999999999999


Q ss_pred             HccCCCcchhhhhHHHHHHHHHhhhhhcc
Q 021258          254 WFRHPLSWEQCIGSIIVFGALYTRSFFKK  282 (315)
Q Consensus       254 ~f~e~~t~~~~iG~~lvl~gv~~~~~~k~  282 (315)
                      ++||.+|+.||.|++.|+.+..=..+.-|
T Consensus       257 ~L~e~ls~~qwlaI~~ViaAsaG~~lt~~  285 (292)
T COG5006         257 FLGETLTLIQWLAIAAVIAASAGSTLTAR  285 (292)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence            99999999999999999976553343333

>TIGR00803 nst UDP-galactose transporter

Probab=99.61  E-value=9.1e-15  Score=127.73  Aligned_cols=203  Identities=19%  Similarity=0.211  Sum_probs=142.2

Q ss_pred             CchHHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCC-------------CCCCC---CCCCC
Q 021258           71 VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGA-------------DLSPY---SKGRE  134 (315)
Q Consensus        71 v~~~~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~-------------~~~~~---~~~~~  134 (315)
                      +++|.++.++++.++++++.++...++|++..|+++..+++.|+.....++.+.             +.++.   ....+
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            567889999999999999999999999999999999999999987544332100             00000   00124


Q ss_pred             chhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHh-CchhHHhHhhhhChHHHHHHHHH
Q 021258          135 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILE-GHLFLAIDFVYHHLDCFFDVALL  213 (315)
Q Consensus       135 ~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~  213 (315)
                      +.+.|..+.+.+++++++..+++|+..|+++...+...+....++.+......... ++......+....+...   ...
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  158 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAV---WIV  158 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHH---HHH
Confidence            67889999999999999999999998766543333333333333333222221111 11111111111122221   223


Q ss_pred             HHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHh
Q 021258          214 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT  276 (315)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~  276 (315)
                      .+..+.++.+....+|+.|+.+.+.+..++++++.++|+++|||+++..+++|..+++.|+.+
T Consensus       159 ~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       159 GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            345667778889999999999999999999999999999999999999999999999988765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.19  E-value=1e-10  Score=90.30  Aligned_cols=134  Identities=14%  Similarity=0.119  Sum_probs=106.5

Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHHH
Q 021258          140 VSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT  219 (315)
Q Consensus       140 ~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  219 (315)
                      .++++++++++++..++.|.=.+  +.||....+--+.....++...++..|++...-   ..+++.|..++..++.+..
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~---~~~~k~~lflilSGla~gl   79 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGG---EIGPKSWLFLILSGLAGGL   79 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceeccc---ccCcceehhhhHHHHHHHH
Confidence            56778899999999888765454  356655566566666556556666666643210   1366778888888888999


Q ss_pred             HHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhh
Q 021258          220 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  278 (315)
Q Consensus       220 ~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~  278 (315)
                      +-++|++++|.-.++....+.-..+++++++|++++||+++..+|+|++++..|.++..
T Consensus        80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            99999999999999999999999999999999999999999999999999998876544

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.18  E-value=3e-10  Score=89.19  Aligned_cols=124  Identities=18%  Similarity=0.227  Sum_probs=96.5

Q ss_pred             HhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHH-HHHHHHHHHH
Q 021258          148 GFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTV-ATTSQFFISY  226 (315)
Q Consensus       148 ~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~  226 (315)
                      ++||.+.++.|+..++  .++....++....+.+ .++.........    ....+++.+...+..+.+ +.+++.++++
T Consensus         1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFY   73 (126)
T ss_pred             ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHH
Confidence            3678888888888775  6788999998888876 444433322211    112334445555555554 6788899999


Q ss_pred             HHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhh
Q 021258          227 TIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  278 (315)
Q Consensus       227 ~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~  278 (315)
                      ++++.++..++++.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus        74 a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   74 ALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999987654

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.05  E-value=2e-09  Score=83.87  Aligned_cols=101  Identities=14%  Similarity=0.128  Sum_probs=79.9

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCC-----CCCchhhHHHHHHHHH-HHHHHhhHhcccCchHHHHHHhhcchHHHHHHHHH
Q 021258           20 FCNRLMTSAVSAGTLIASRKAID-----PVAPVYKYCLVSMSNI-LTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTL   93 (315)
Q Consensus        20 ~~q~l~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~l   93 (315)
                      .+|++.+.+....+...+++..+     ++++++..+..|++.. .+..+.++|+++.+ +....+.++.|+++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            46778888777766655543211     1344444556677765 78899999999999 57778899999999999999


Q ss_pred             HhccccChhhHHHHHHHHHhHHHHhcCC
Q 021258           94 IMQKRYKGYDYFLALLVTLGCSIFILFP  121 (315)
Q Consensus        94 ~~~~~~~~~~~~~l~l~~~Gv~l~~~~~  121 (315)
                      ++|||++++++.+++++++|++++...|
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            9999999999999999999999988763

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.98  E-value=2.7e-07  Score=81.75  Aligned_cols=236  Identities=9%  Similarity=0.067  Sum_probs=152.7

Q ss_pred             HHHHHHHHHHHHhhcCCCCC-CCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHHH-hhcchHHHHHHHHHHhccccCh
Q 021258           24 LMTSAVSAGTLIASRKAIDP-VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLA-KCAKMIPVMIWGTLIMQKRYKG  101 (315)
Q Consensus        24 l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l-~~~~p~~~~ll~~l~~~~~~~~  101 (315)
                      +-+.++..+....+++..+. ...+..-++-|++...+....+.|++++.++..+=+ .....+.+.+++.++++|.-+.
T Consensus        21 ~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~  100 (269)
T PF06800_consen   21 IGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTT  100 (269)
T ss_pred             HHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCc
Confidence            33444444444444443221 122222356678889999999999998654322111 1223455888999999998887


Q ss_pred             hhHH----HHHHHHHhHHHHhcCCCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHH
Q 021258          102 YDYF----LALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTL  177 (315)
Q Consensus       102 ~~~~----~l~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~  177 (315)
                      .+++    ++++.++|+.+.+..+.+++.   .+++.+...|++.++.+.+.|..|.+..+-    .+.+++...+-++.
T Consensus       101 ~~~~~G~~Al~liiiGv~lts~~~~~~~~---~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~lPqai  173 (269)
T PF06800_consen  101 TQKIIGFLALVLIIIGVILTSYQDKKSDK---SSSKSNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFLPQAI  173 (269)
T ss_pred             chHHHHHHHHHHHHHHHHHhccccccccc---cccccchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHHHHHH
Confidence            7754    899999999998887543221   111356677999999999999888876433    24677766664433


Q ss_pred             HHHHHH-HHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcc
Q 021258          178 CSCVLS-LSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFR  256 (315)
Q Consensus       178 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~  256 (315)
                       +.++. ..+.....+     .  ..+...|.. +.-++.=.++++++..+.++.+..+.=.++.+..+++.+.|.++++
T Consensus       174 -Gm~i~a~i~~~~~~~-----~--~~~k~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~  244 (269)
T PF06800_consen  174 -GMLIGAFIFNLFSKK-----P--FFEKKSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILK  244 (269)
T ss_pred             -HHHHHHHHHhhcccc-----c--ccccchHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEE
Confidence             33332 222222211     0  112233433 2335555678888888999999999999999999999999999999


Q ss_pred             CCCcch----hhhhHHHHHHHHH
Q 021258          257 HPLSWE----QCIGSIIVFGALY  275 (315)
Q Consensus       257 e~~t~~----~~iG~~lvl~gv~  275 (315)
                      |.=+..    .++|.++++.|.+
T Consensus       245 E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  245 EKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             ecCchhhHHHHHHHHHHHHHhhh
Confidence            988866    4468887776644

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.93  E-value=8.7e-08  Score=87.35  Aligned_cols=140  Identities=11%  Similarity=0.119  Sum_probs=104.9

Q ss_pred             CchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHH
Q 021258          134 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALL  213 (315)
Q Consensus       134 ~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  213 (315)
                      .+...|.++.++++++|+...+..|.. .  +.++.++.++...++.++.++.....++....... ..+++.+...+..
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   79 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL-IQTPQKIFMLAVS   79 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HcCHHHHHHHHHH
Confidence            355679999999999999999888653 3  47899999999999888776665444332111010 1122222222222


Q ss_pred             HHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhh
Q 021258          214 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  277 (315)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~  277 (315)
                      +++....+.++++++++.++..++++.++.|++..++++++++|+++..+++|.++.+.|+.+.
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li  143 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQ  143 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence            3344556788999999999999999999999999999999999999999999999998887654

>TIGR00688 rarD rarD protein

Probab=98.93  E-value=7.4e-08  Score=85.86  Aligned_cols=137  Identities=13%  Similarity=0.088  Sum_probs=103.3

Q ss_pred             hHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHH-hHhhhhCh-HHHHHHHHHHH
Q 021258          138 WGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLA-IDFVYHHL-DCFFDVALLST  215 (315)
Q Consensus       138 ~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~l~~~~~  215 (315)
                      .|+++.++++++++...+..|.+ .  +.++.++.++-+.++++++++.....++.... .+...... +.+..+...++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-K--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-c--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            37889999999999999888763 3  47899999999999987776654443321110 01100111 11223344455


Q ss_pred             HHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhh
Q 021258          216 VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  277 (315)
Q Consensus       216 ~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~  277 (315)
                      +....+.+++.++++.++.+++++.++.|+++.++++++++|+++..+++|.++.++|+.+.
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li  140 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN  140 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            56667788999999999999999999999999999999999999999999999999887644

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.88  E-value=1.6e-08  Score=79.32  Aligned_cols=104  Identities=15%  Similarity=0.145  Sum_probs=82.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcCC---CCCCCchhhHHHHHHH-HHHHHHHhhHhcccCchHHHHHHhhcchHHHHH
Q 021258           14 YSLFLVFCNRLMTSAVSAGTLIASRKA---IDPVAPVYKYCLVSMS-NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMI   89 (315)
Q Consensus        14 ~p~~lt~~q~l~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~l   89 (315)
                      .|...+++|++.+.+ ..+.....+++   ...++.+...+..+++ ...+..+.+.++++++++...++..+.|+++++
T Consensus        18 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i   96 (126)
T PF00892_consen   18 SPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAI   96 (126)
T ss_pred             CHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHH
Confidence            488999999999986 44333333221   1122333344566666 578889999999999999999999999999999


Q ss_pred             HHHHHhccccChhhHHHHHHHHHhHHHHh
Q 021258           90 WGTLIMQKRYKGYDYFLALLVTLGCSIFI  118 (315)
Q Consensus        90 l~~l~~~~~~~~~~~~~l~l~~~Gv~l~~  118 (315)
                      ++++++||+++++++.+++++++|+.++.
T Consensus        97 ~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   97 LGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.84  E-value=8.3e-09  Score=85.67  Aligned_cols=219  Identities=11%  Similarity=0.086  Sum_probs=149.3

Q ss_pred             HHHHHHHHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCC
Q 021258           51 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS  130 (315)
Q Consensus        51 ~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~  130 (315)
                      .+.+++..+.++++..|++.++.+.++-+.+|.-.++.++++.+++.|+...+++++++.+.|+.++.+.|.        
T Consensus        57 aPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN--------  128 (290)
T KOG4314|consen   57 APFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN--------  128 (290)
T ss_pred             cceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc--------
Confidence            466778888999999999999999999999999999999999999999999999999999999998877631        


Q ss_pred             CCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCC-ChHHHHHHHHHHHHHH-HHHH--HHHhCchhHHhHhhhhChHH
Q 021258          131 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDM-EIHNQIFYTTLCSCVL-SLSG--LILEGHLFLAIDFVYHHLDC  206 (315)
Q Consensus       131 ~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~-~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~  206 (315)
                       +..+.+.|+.++.+|++..++|-+..|+...+-+. +....|--..++...+ ..|.  +.+++-  |.++.....|  
T Consensus       129 -~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V--E~~qsFA~~P--  203 (290)
T KOG4314|consen  129 -EHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGV--EHLQSFAAAP--  203 (290)
T ss_pred             -hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhch--HHHHHHhhCC--
Confidence             24789999999999999999998888877654332 1222222112222211 1222  122221  1111111111  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhcc
Q 021258          207 FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  282 (315)
Q Consensus       207 ~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~  282 (315)
                      |..+...+....--++.+..++..+.|...|+-..+.......+..++-+-..+.....|..++..|..+-..+.+
T Consensus       204 WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d  279 (290)
T KOG4314|consen  204 WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPED  279 (290)
T ss_pred             chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccc
Confidence            3332222222222233444566777888888777777777777777766667888899999999999776655444

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.72  E-value=3.6e-07  Score=82.65  Aligned_cols=133  Identities=9%  Similarity=0.008  Sum_probs=94.0

Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHHH
Q 021258          140 VSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT  219 (315)
Q Consensus       140 ~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  219 (315)
                      .++.+.++++++...+..|+..++ + ++  ..++....+++...|........   ..+.....+.+..++..++....
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~-~~--~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~   75 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-E-PD--FLWWALLAHSVLLTPYGLWYLAQ---VGWSRLPATFWLLLAISAVANMV   75 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-h-hH--HHHHHHHHHHHHHHHHHHHhccc---CCCCCcchhhHHHHHHHHHHHHH
Confidence            456778889999998888766544 1 22  34555566666666654332100   01111112223333344555667


Q ss_pred             HHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhh
Q 021258          220 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  279 (315)
Q Consensus       220 ~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~  279 (315)
                      .+.+.+.++++.++..++++.+..|+++.++++++++|+++..+++|.+++++|+.+...
T Consensus        76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            778889999999999999999999999999999999999999999999999999876553

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.62  E-value=1.3e-07  Score=73.29  Aligned_cols=106  Identities=10%  Similarity=0.031  Sum_probs=82.4

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhcCCCCC----CCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHHHhhcchHHHH
Q 021258           13 KYSLFLVFCNRLMTSAVSAGTLIASRKAIDP----VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVM   88 (315)
Q Consensus        13 ~~p~~lt~~q~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~   88 (315)
                      .+|.+-|++|.++..+++...+...++....    ++.|.-..+-|+...++..+.|.|++.=+.+...=+..++|+++.
T Consensus        29 vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~  108 (140)
T COG2510          29 VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAV  108 (140)
T ss_pred             cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHH
Confidence            4689999999999998888777665543221    233322335566678888999999998666554556778899999


Q ss_pred             HHHHHHhccccChhhHHHHHHHHHhHHHHh
Q 021258           89 IWGTLIMQKRYKGYDYFLALLVTLGCSIFI  118 (315)
Q Consensus        89 ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~  118 (315)
                      ++++++++||+|..+|+|++++++|+++.+
T Consensus       109 lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510         109 LLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            999999999999999999999999987754

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.61  E-value=1.1e-07  Score=86.46  Aligned_cols=222  Identities=14%  Similarity=0.206  Sum_probs=121.2

Q ss_pred             HHHHH-HHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCC
Q 021258           52 LVSMS-NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS  130 (315)
Q Consensus        52 ~~~~~-~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~  130 (315)
                      +.|+. +.++..+++.|+.+.|.+..+=+.+...++.++++..++|||++++++.|..+++.|++++....++++.....
T Consensus        54 ~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~  133 (300)
T PF05653_consen   54 WIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTL  133 (300)
T ss_pred             HHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCH
Confidence            45554 56778899999999999888777889999999999999999999999999999999988766543321110000


Q ss_pred             CC-----CCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchh----HHh--Hh
Q 021258          131 KG-----RENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLF----LAI--DF  199 (315)
Q Consensus       131 ~~-----~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~  199 (315)
                      ++     ......-++.......+     .+.-...+|++.+  .++.|....+.+-. ...+......    +..  +.
T Consensus       134 ~~l~~~~~~~~fl~y~~~~~~~~~-----~L~~~~~~r~g~~--~i~vyi~i~sl~Gs-~tvl~~K~i~~~i~~~~~g~~  205 (300)
T PF05653_consen  134 DELIALLSQPGFLVYFILVLVLIL-----ILIFFIKPRYGRR--NILVYISICSLIGS-FTVLSAKAISILIKLTFSGDN  205 (300)
T ss_pred             HHHHHHhcCcceehhHHHHHHHHH-----HHHHhhcchhccc--ceEEEEEEeccccc-hhhhHHHHHHHHHHHHhcCch
Confidence            00     00111112212111111     1111111222211  12223222221110 0000000000    000  00


Q ss_pred             hhhChHHHHHHHHHHHHHHHHH-HHHHHHHhhhChHHHHHHH-HHHHHHHHHHHHHHccC--CCcchh----hhhHHHHH
Q 021258          200 VYHHLDCFFDVALLSTVATTSQ-FFISYTIRTFGALTFATIM-TTRQLVSIVLSCVWFRH--PLSWEQ----CIGSIIVF  271 (315)
Q Consensus       200 ~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~a~~~si~~-~l~~v~~~ils~l~f~e--~~t~~~----~iG~~lvl  271 (315)
                      .-.++..|..++.+ +.+.+.| .+...++++.+++....+. ..-...+++-|.++|+|  ..++.+    ..|..+++
T Consensus       206 ~f~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii  284 (300)
T PF05653_consen  206 QFTYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIII  284 (300)
T ss_pred             hhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHH
Confidence            01234445433333 4456666 4557799999998755444 44556677777888887  455544    45666677


Q ss_pred             HHHHhhhhhcc
Q 021258          272 GALYTRSFFKK  282 (315)
Q Consensus       272 ~gv~~~~~~k~  282 (315)
                      .|+.+-...|+
T Consensus       285 ~GV~lL~~~~~  295 (300)
T PF05653_consen  285 IGVFLLSSSKD  295 (300)
T ss_pred             HhhheeeccCc
Confidence            88887664444

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.52  E-value=3.9e-06  Score=78.41  Aligned_cols=140  Identities=14%  Similarity=0.106  Sum_probs=103.3

Q ss_pred             hHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHH
Q 021258          138 WGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVA  217 (315)
Q Consensus       138 ~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  217 (315)
                      .-++.++.-.++|+...++.|..++ .++++....+|-..++.++++++.......   ......+.+.+..+...++++
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~---~~~~~~~~~~~~~l~l~g~~g   88 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRS---RSLPPLSVSILSKIGLLGFLG   88 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHh---cccCcchHHHHHHHHHHHHHH
Confidence            3455566667788888888888774 478999999999999888887765432110   000001122344455566666


Q ss_pred             HHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHH------ccCCCcchhhhhHHHHHHHHHhhhhhc
Q 021258          218 TTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVW------FRHPLSWEQCIGSIIVFGALYTRSFFK  281 (315)
Q Consensus       218 ~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~------f~e~~t~~~~iG~~lvl~gv~~~~~~k  281 (315)
                      .+.+.+++.++++++|..++++.++.|+++.++++++      ++|+++..+++|+++.++|+.+....+
T Consensus        89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~  158 (358)
T PLN00411         89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYH  158 (358)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHcc
Confidence            4455677889999999999999999999999999999      699999999999999999987655433

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.44  E-value=9.3e-06  Score=63.09  Aligned_cols=103  Identities=16%  Similarity=0.221  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHH-HHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHc
Q 021258          177 LCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT-TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWF  255 (315)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f  255 (315)
                      .++.+.........++..+........+  +...+..++++. ..+.+++.+.++.++ .++++..+.|+++.+++.+++
T Consensus         6 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~   82 (113)
T PF13536_consen    6 LFSVLFLLIILLIRGRLRDLFRALRRKP--WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFF   82 (113)
T ss_pred             HHHHHHHHHHHHHHccHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHh
Confidence            3445555554444444433222222222  222344455554 667788899999995 888999999999999999999


Q ss_pred             cCCCcchhhhhHHHHHHHHHhhhhhcc
Q 021258          256 RHPLSWEQCIGSIIVFGALYTRSFFKK  282 (315)
Q Consensus       256 ~e~~t~~~~iG~~lvl~gv~~~~~~k~  282 (315)
                      +|+++..+++|.++++.|+.+..+..-
T Consensus        83 ~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   83 KERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            999999999999999999988776554

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.41  E-value=1.3e-05  Score=71.05  Aligned_cols=140  Identities=13%  Similarity=0.114  Sum_probs=105.6

Q ss_pred             hhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHH
Q 021258          136 TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST  215 (315)
Q Consensus       136 ~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  215 (315)
                      .-.|+++.+.+-+.||+...+.+-+.   +.++.|+..+-..++.++.+.......+..+..+ ...+|+.+......+.
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l~a~   80 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLALTAL   80 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHHHHH
Confidence            34689999999999999887775543   3578899999999998888776666555544333 3356665533322222


Q ss_pred             HHHHHH-HHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhh
Q 021258          216 VATTSQ-FFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  280 (315)
Q Consensus       216 ~~~~~~-~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~  280 (315)
                      .. ..| ..+.++..+-....+|+-.+++|++.+++|.++++|+++..|++..++...|+....+.
T Consensus        81 li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          81 LI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            21 234 34556888889999999999999999999999999999999999999999998876654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.35  E-value=2.7e-05  Score=61.91  Aligned_cols=68  Identities=9%  Similarity=0.156  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHH--HccCCCcchhhhhHHHHHHHHHhhhhhcc
Q 021258          215 TVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCV--WFRHPLSWEQCIGSIIVFGALYTRSFFKK  282 (315)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l--~f~e~~t~~~~iG~~lvl~gv~~~~~~k~  282 (315)
                      ++..++.+++..++++.+.+.+..+..+.++...+.++.  +|||++|+.+++|++++++|+++..+.++
T Consensus        56 ~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         56 AGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            356677889999999999999999999888888888885  89999999999999999999998775433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.28  E-value=1.9e-05  Score=70.17  Aligned_cols=116  Identities=12%  Similarity=0.082  Sum_probs=85.2

Q ss_pred             hhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHH-HHHHHHHHHHHHHh
Q 021258          151 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST-VATTSQFFISYTIR  229 (315)
Q Consensus       151 a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~  229 (315)
                      |...+..|...+. ..++.+..++....+.+++.+.....           .+.+.+...+..+. +..+.+.+++.+++
T Consensus         2 g~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~   69 (260)
T TIGR00950         2 GTTGVVIGQYLEG-QVPLYFAVFRRLIFALLLLLPLLRRR-----------PPLKRLLRLLLLGALQIGVFYVLYFVAVK   69 (260)
T ss_pred             cchHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHhc-----------cCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344555554443 46788888888888777766643221           11222323333433 44566778889999


Q ss_pred             hhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhh
Q 021258          230 TFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  278 (315)
Q Consensus       230 ~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~  278 (315)
                      +.++..++++..+.|+++.+++.++++|++++.+++|+++.+.|+.+..
T Consensus        70 ~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~  118 (260)
T TIGR00950        70 RLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLL  118 (260)
T ss_pred             hcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhc
Confidence            9999999999999999999999999999999999999999999877754

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.23  E-value=7e-05  Score=68.07  Aligned_cols=127  Identities=15%  Similarity=0.096  Sum_probs=92.8

Q ss_pred             HHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHH-HHH
Q 021258          142 LMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVA-TTS  220 (315)
Q Consensus       142 ~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~  220 (315)
                      ..++-.++||...+..|....  +.+|.+.+++-..++.+++++.....+.-       ....+.+......+.+. ...
T Consensus        12 ~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~   82 (292)
T PRK11272         12 ALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHP-------LPTLRQWLNAALIGLLLLAVG   82 (292)
T ss_pred             HHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCC-------CCcHHHHHHHHHHHHHHHHHH
Confidence            345556778888888876654  57899999999999888877765443220       01122343334444443 344


Q ss_pred             HHHHHHHH-hhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhh
Q 021258          221 QFFISYTI-RTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  278 (315)
Q Consensus       221 ~~~~~~~~-~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~  278 (315)
                      +.+++.+. ++.++..++++.++.|+++.+++.+ ++|+++..+++|.++.+.|+.+..
T Consensus        83 ~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~  140 (292)
T PRK11272         83 NGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLN  140 (292)
T ss_pred             HHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHh
Confidence            55666676 9999999999999999999999985 799999999999999999987654

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.15  E-value=4.6e-05  Score=59.01  Aligned_cols=63  Identities=10%  Similarity=-0.024  Sum_probs=56.3

Q ss_pred             HHHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHh
Q 021258           56 SNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI  118 (315)
Q Consensus        56 ~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~  118 (315)
                      ++.....+...+++.+|.+.+-.+-+..++++++++++++|||++++|++++.++++|++++.
T Consensus        46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            466778889999999999877666779999999999999999999999999999999998764

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.11  E-value=0.00013  Score=66.67  Aligned_cols=119  Identities=11%  Similarity=0.075  Sum_probs=85.4

Q ss_pred             hHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 021258          153 TSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFG  232 (315)
Q Consensus       153 ~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  232 (315)
                      .++++|...++. ..|....+.....+.+...+... .+.. +   ....+.+.+..++..+++..+.+.+.+.++++++
T Consensus        17 ~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~~~-~~~~-~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s   90 (302)
T TIGR00817        17 FNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLSWS-SGLP-K---RLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVA   90 (302)
T ss_pred             HHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHHH-hCCC-C---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            446777777653 34677777766666554433311 1110 0   0011233455566677777667778889999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhh
Q 021258          233 ALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  277 (315)
Q Consensus       233 a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~  277 (315)
                      ++.++++..+.|+++.++++++++|+++..++.|.+++++|+.+.
T Consensus        91 ~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~  135 (302)
T TIGR00817        91 VSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA  135 (302)
T ss_pred             HHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence            999999999999999999999999999999999999999998654

specificities overlap.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.09  E-value=0.00014  Score=66.41  Aligned_cols=123  Identities=11%  Similarity=-0.018  Sum_probs=88.4

Q ss_pred             HHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHHHH
Q 021258          141 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTS  220 (315)
Q Consensus       141 ~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  220 (315)
                      ++.++++++||...+..|...+  +.+|....++-..++++..++...  ..        ...   +..++..+++....
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~--~~--------~~~---~~~~~~~g~~~~~~   71 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVA--RP--------KVP---LNLLLGYGLTISFG   71 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhc--CC--------CCc---hHHHHHHHHHHHHH
Confidence            4567778899999888877664  478999999888876655444321  10        001   11222334433333


Q ss_pred             H-HHHHHHHhh-hChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhh
Q 021258          221 Q-FFISYTIRT-FGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  278 (315)
Q Consensus       221 ~-~~~~~~~~~-~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~  278 (315)
                      + .+++.+.++ .++..++++.++.|+++.++++++++|+++..+++|.++.+.|+.+-.
T Consensus        72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~  131 (299)
T PRK11453         72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLI  131 (299)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence            3 345667776 578899999999999999999999999999999999999999877655

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.07  E-value=0.00015  Score=67.76  Aligned_cols=134  Identities=7%  Similarity=-0.010  Sum_probs=93.6

Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHccCCCC-hHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHH
Q 021258          140 VSLMVGYLGFDGFTSTFQDKLFKGYDME-IHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT  218 (315)
Q Consensus       140 ~~~~~~s~~~~a~~~v~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  218 (315)
                      ..+++.--.+........|..++..  + |..+..+...++.++..+.... + ..+..++ ......+..++..+++..
T Consensus        51 ~~~~~~wy~~s~~~~~~nK~vl~~~--~~P~~l~~~~~~~~~l~~~~~~~~-~-~~~~~~~-~~~~~~~~~llp~gl~~~  125 (350)
T PTZ00343         51 ALLFLTWYALNVLYVVDNKLALNML--PLPWTISSLQLFVGWLFALLYWAT-G-FRKIPRI-KSLKLFLKNFLPQGLCHL  125 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC--ChhHHHHHHHHHHHHHHHHHHHHh-C-CCCCCCC-CCHHHHHHHHHHHHHHHH
Confidence            3333333334455566777777654  5 8888888888876654443221 1 1000001 001124555666777777


Q ss_pred             HHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhh
Q 021258          219 TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  278 (315)
Q Consensus       219 ~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~  278 (315)
                      ..+...+.++++.+++.++++..+.|+++.++++++++|+++..++.|.+++++|+.+..
T Consensus       126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            666666788999999999999999999999999999999999999999999999987654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.06  E-value=9.1e-05  Score=67.33  Aligned_cols=131  Identities=13%  Similarity=0.024  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHH
Q 021258          139 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT  218 (315)
Q Consensus       139 G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  218 (315)
                      |++++++++++|+...+..|++.   +.++.+.+.  ..++.++...........    .  ...++.+..-+..++.=.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~~--~~~g~l~~~~~~~~~~~~----~--~~~~~~~~~g~l~G~~w~   70 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTLG--TTFGALILSIAIAIFVLP----E--FWALSIFLVGLLSGAFWA   70 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHHH--HHHHHHHHHHHHHHHhCC----c--ccccHHHHHHHHHHHHHH
Confidence            57888999999999988877653   444544442  333443333322221110    0  012333333333344456


Q ss_pred             HHHHHHHHHHhhhChHHHHHHHH-HHHHHHHHHHHHHccCCCcchh----hhhHHHHHHHHHhhhhh
Q 021258          219 TSQFFISYTIRTFGALTFATIMT-TRQLVSIVLSCVWFRHPLSWEQ----CIGSIIVFGALYTRSFF  280 (315)
Q Consensus       219 ~~~~~~~~~~~~~~a~~~si~~~-l~~v~~~ils~l~f~e~~t~~~----~iG~~lvl~gv~~~~~~  280 (315)
                      .+|++++.++++.+.+.+-.+.+ +.++++.+++.++|+|..+..+    ++|.++++.|+.+....
T Consensus        71 ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~  137 (290)
T TIGR00776        71 LGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS  137 (290)
T ss_pred             hhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence            78899999999999999988888 8888999999999999999999    99999999998876544

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.06  E-value=0.00015  Score=66.31  Aligned_cols=126  Identities=11%  Similarity=0.038  Sum_probs=93.4

Q ss_pred             hHHHHHHHHccCCCC--hHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021258          153 TSTFQDKLFKGYDME--IHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRT  230 (315)
Q Consensus       153 ~~v~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  230 (315)
                      +.+.||++.++...+  +..+.+.+....++...+.....+.     .  ......+...+..+++..++..+...++++
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~al~~   87 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF-----P--KSRKIPLKKYAILSFLFFLASVLSNAALKY   87 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc-----c--CCCcChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            457899998765444  6667776666666665554333320     0  011112333445567777777888899999


Q ss_pred             hChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhccccC
Q 021258          231 FGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE  285 (315)
Q Consensus       231 ~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~~  285 (315)
                      .+-.+..+.-..+++.+.++++++++++.+..++.+.+++.+|+.+....+.+++
T Consensus        88 i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~  142 (303)
T PF08449_consen   88 ISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS  142 (303)
T ss_pred             CChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence            9999999999999999999999999999999999999999999988887665444

; GO: 0055085 transmembrane transport

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.03  E-value=0.00016  Score=65.91  Aligned_cols=128  Identities=5%  Similarity=-0.042  Sum_probs=88.3

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHH
Q 021258          139 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT  218 (315)
Q Consensus       139 G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  218 (315)
                      ++++.++++++|+......|...+  +.+|....++-...+.+++++...    ..+ .   ...+  +..++..++...
T Consensus         5 ~~l~~l~a~~~Wg~~~~~~k~~~~--~~~P~~~~~~R~~~a~l~l~~~~~----~~~-~---~~~~--~~~~~~~~l~~~   72 (295)
T PRK11689          5 ATLIGLIAILLWSTMVGLIRGVSE--SLGPVGGAAMIYSVSGLLLLLTVG----FPR-L---RQFP--KRYLLAGGLLFV   72 (295)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHcc----ccc-c---cccc--HHHHHHHhHHHH
Confidence            466777888999998888877654  368888888888888777665421    100 0   0111  112222222222


Q ss_pred             HHHHHHHHHH----hhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhh
Q 021258          219 TSQFFISYTI----RTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  278 (315)
Q Consensus       219 ~~~~~~~~~~----~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~  278 (315)
                      ..+.+.+.++    +..++..++++.++.|+++.++++++++|+++..+++|.++.+.|+.+-.
T Consensus        73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~  136 (295)
T PRK11689         73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVL  136 (295)
T ss_pred             HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhhee
Confidence            2233333333    56788889999999999999999999999999999999999999987655

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.99  E-value=7.2e-05  Score=57.91  Aligned_cols=62  Identities=6%  Similarity=0.085  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhh
Q 021258          216 VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  277 (315)
Q Consensus       216 ~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~  277 (315)
                      +...+.+++..++++.+...+...-++.++.+.++|+++|||++++.+++|++++++|+..-
T Consensus        46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            34456778889999999999999999999999999999999999999999999999998654

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.87  E-value=0.0005  Score=63.53  Aligned_cols=143  Identities=10%  Similarity=0.076  Sum_probs=92.5

Q ss_pred             chhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHH--HHHHH---HHHHhCchhHHhHhhhhChHHHHH
Q 021258          135 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC--VLSLS---GLILEGHLFLAIDFVYHHLDCFFD  209 (315)
Q Consensus       135 ~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  209 (315)
                      +...|+++++++++|++...+-+|| .|++   ++|.. +. ..+.  .+..|   ..+..+++.+.  ..+.++..+..
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w---~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~--~~~~~~~~~~~   75 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKW---SWETM-WS-VGGIFSWLILPWLIAALLLPDFWAY--YSSFSGSTLLP   75 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCC---chhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHH--HHhcCHHHHHH
Confidence            5678999999999999998887766 3443   23443 32 1111  11122   11112222221  11245555554


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhChHH-HHHHHHHHHHHHHHHHHHHccCCC---c----chhhhhHHHHHHHHHhhhhhc
Q 021258          210 VALLSTVATTSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPL---S----WEQCIGSIIVFGALYTRSFFK  281 (315)
Q Consensus       210 l~~~~~~~~~~~~~~~~~~~~~~a~~-~si~~~l~~v~~~ils~l~f~e~~---t----~~~~iG~~lvl~gv~~~~~~k  281 (315)
                      -++.+++=.++|+.++.++|+.+-+. ..+..-+.-+.+.+++.+++||-.   +    ....+|.++++.|+.++.+..
T Consensus        76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            45556666789999999999999777 555566788899999999998643   2    336688888999999998755


Q ss_pred             cccC
Q 021258          282 KVSE  285 (315)
Q Consensus       282 ~~~~  285 (315)
                      .+|+
T Consensus       156 ~~k~  159 (345)
T PRK13499        156 QLKE  159 (345)
T ss_pred             hhcc
Confidence            5444

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.81  E-value=0.0059  Score=56.51  Aligned_cols=226  Identities=12%  Similarity=0.009  Sum_probs=119.7

Q ss_pred             HHHHHHHHHHHHHhhHhcccCchHHHHH-HhhcchHHHHHHHHHHhcccc-------ChhhHHHHHHHHHhHHHHhcCCC
Q 021258           51 CLVSMSNILTTTCQYEALKYVSFPVQTL-AKCAKMIPVMIWGTLIMQKRY-------KGYDYFLALLVTLGCSIFILFPS  122 (315)
Q Consensus        51 ~~~~~~~~~~~~l~~~al~~v~~~~~~~-l~~~~p~~~~ll~~l~~~~~~-------~~~~~~~l~l~~~Gv~l~~~~~~  122 (315)
                      ++-|++...+......+.+|+.++..+- --....+...++..++++|-.       ...-..+++++++|+++......
T Consensus        77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence            4567778889999999999976543321 122223445566666666432       23457899999999999988222


Q ss_pred             CCCCCCCC--CCCCchhhHHHHHHHHHHhhhhhH-------HHHHHHHccCCCChHHHHHHHHH---HHHH-HHHHHHHH
Q 021258          123 GADLSPYS--KGRENTVWGVSLMVGYLGFDGFTS-------TFQDKLFKGYDMEIHNQIFYTTL---CSCV-LSLSGLIL  189 (315)
Q Consensus       123 ~~~~~~~~--~~~~~~~~G~~~~~~s~~~~a~~~-------v~~~~l~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~  189 (315)
                      .+|.+.+.  +++.+.-.|++.++++.+.+++++       ...+... +.+.++....+-+..   .+.. ..+.++..
T Consensus       157 ~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~-~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~  235 (345)
T PRK13499        157 LKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAA-ALGVDPLYAALPSYVVIMGGGAITNLGFCFI  235 (345)
T ss_pred             hcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhh-hcCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11211110  123456789999999999999887       3333221 234444322222221   1211 11111111


Q ss_pred             ---hCc-hhHHhHhhhhChHHHHHHHHH---HHHHHHHHHHHHHHHhhhChHHHHH---HH-HHHHHHHHHHHHHHccCC
Q 021258          190 ---EGH-LFLAIDFVYHHLDCFFDVALL---STVATTSQFFISYTIRTFGALTFAT---IM-TTRQLVSIVLSCVWFRHP  258 (315)
Q Consensus       190 ---~~~-~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~a~~~si---~~-~l~~v~~~ils~l~f~e~  258 (315)
                         .++ .....++....+..+...+.-   ++.=.+++.++..+-.+.+.....+   +. .+..+++.++|. +++|.
T Consensus       236 ~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~  314 (345)
T PRK13499        236 RLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEW  314 (345)
T ss_pred             HHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhc
Confidence               111 100001100001112221111   2222344555555555554433333   33 667789999999 59997


Q ss_pred             Cc------chhhhhHHHHHHHHHhhh
Q 021258          259 LS------WEQCIGSIIVFGALYTRS  278 (315)
Q Consensus       259 ~t------~~~~iG~~lvl~gv~~~~  278 (315)
                      =+      ...++|.++++.|..+..
T Consensus       315 K~a~~k~~~~l~~G~vliI~g~~lig  340 (345)
T PRK13499        315 KGASRRPVRVLSLGCVVIILAANIVG  340 (345)
T ss_pred             cCCCccchhHHHHHHHHHHHHHHHHh
Confidence            66      567899999888766544

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.79  E-value=0.0015  Score=58.41  Aligned_cols=143  Identities=12%  Similarity=0.008  Sum_probs=92.4

Q ss_pred             chhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHH
Q 021258          135 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLS  214 (315)
Q Consensus       135 ~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  214 (315)
                      ....+....+...+.++......+...+. ..+.....++....+.+...+.......  .  ......+ .+...+.-+
T Consensus         4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~-~~~~~~~~~   77 (292)
T COG0697           4 ALLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEPR--G--LRPALRP-WLLLLLLAL   77 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcc--c--ccccccc-hHHHHHHHH
Confidence            34456666666667777777666655443 2344555554555554442222111100  0  0001111 122233334


Q ss_pred             HHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHH-HHccCCCcchhhhhHHHHHHHHHhhhhhccc
Q 021258          215 TVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSC-VWFRHPLSWEQCIGSIIVFGALYTRSFFKKV  283 (315)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~-l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~  283 (315)
                      +.....+.+++.++++.++..++++.+..|++..+++. ++++|+++..+++|..+.+.|+.+.......
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            45566778889999999999999999999999999997 6779999999999988889998887765543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.78  E-value=0.00023  Score=55.61  Aligned_cols=67  Identities=15%  Similarity=0.179  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHHHHhhhChHH-HHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhc
Q 021258          215 TVATTSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK  281 (315)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~a~~-~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k  281 (315)
                      ++..++.++...++|+.+-.. .++..-+..+.+.++++++|||++|+.+++|+.++++|++......
T Consensus        38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            344566777888899888776 4555678889999999999999999999999999999987765433

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.76  E-value=0.00015  Score=65.06  Aligned_cols=221  Identities=13%  Similarity=0.183  Sum_probs=127.4

Q ss_pred             HHHHH-HHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCCCCCCCCCCC
Q 021258           52 LVSMS-NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS  130 (315)
Q Consensus        52 ~~~~~-~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~  130 (315)
                      ..|++ +.++-.++|.|+.|.|.+..+-+-+.+.+..++++..++|||.++...+|..++++|-.+++...++.+.-.+.
T Consensus        68 w~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~  147 (335)
T KOG2922|consen   68 WAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESV  147 (335)
T ss_pred             HHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccH
Confidence            56665 67889999999999999888888888899999999999999999999999999999977776654321110000


Q ss_pred             CC-----CCchh---hHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHh---
Q 021258          131 KG-----RENTV---WGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDF---  199 (315)
Q Consensus       131 ~~-----~~~~~---~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  199 (315)
                      .+     .+...   .+.+..+...+.      +  ...++++.  ..++.|....+.+-.+-... ...+..+++.   
T Consensus       148 ~el~~~~~~~~Fliy~~~iil~~~il~------~--~~~p~~g~--tnilvyi~i~s~iGS~tV~s-vKalg~aiklt~~  216 (335)
T KOG2922|consen  148 EEVWELATEPGFLVYVIIIILIVLILI------F--FYAPRYGQ--TNILVYIGICSLIGSLTVMS-VKALGIAIKLTFS  216 (335)
T ss_pred             HHHHHHhcCccHHHHHHHHHHHHHHHh------e--eecccccc--cceeehhhHhhhhcceeeee-HHHHHHHHHHHhc
Confidence            00     01111   122111111110      0  11123332  23455555555443211100 0111111111   


Q ss_pred             ---hhhChHHHHHHHHHHHHHHHHH-HHHHHHHhhhChHHHHHHHH-HHHHHHHHHHHHHccC--CCcchh----hhhHH
Q 021258          200 ---VYHHLDCFFDVALLSTVATTSQ-FFISYTIRTFGALTFATIMT-TRQLVSIVLSCVWFRH--PLSWEQ----CIGSI  268 (315)
Q Consensus       200 ---~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~a~~~si~~~-l~~v~~~ils~l~f~e--~~t~~~----~iG~~  268 (315)
                         ...+|..|..++.+. .....| .....+++..+++..+.+.+ +-.-+++.-|.++|.|  ..+..+    ..|..
T Consensus       217 g~~ql~~~~ty~~~l~~~-~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~  295 (335)
T KOG2922|consen  217 GNNQLFYPLTWIFLLVVA-TCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFV  295 (335)
T ss_pred             CCcccccHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHH
Confidence               012344454333333 334445 45567899888888666655 4566777888888888  344444    46777


Q ss_pred             HHHHHHHhhhhhcccc
Q 021258          269 IVFGALYTRSFFKKVS  284 (315)
Q Consensus       269 lvl~gv~~~~~~k~~~  284 (315)
                      .++.|+.+....|+++
T Consensus       296 ti~~G~flL~~~kd~~  311 (335)
T KOG2922|consen  296 TIFLGIFLLHRTKDME  311 (335)
T ss_pred             HhhheeeEeeeecccc
Confidence            7778887765444444

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.69  E-value=0.0014  Score=60.47  Aligned_cols=75  Identities=12%  Similarity=0.285  Sum_probs=67.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhc
Q 021258          207 FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK  281 (315)
Q Consensus       207 ~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k  281 (315)
                      |+--+.++++-..++++...++++++.+.+.+......+++.++|+++++++.++.+++|+.+.++|+.+.....
T Consensus        79 ~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD  153 (334)
T PF06027_consen   79 WWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD  153 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence            344445678888999999999999999999999999999999999999999999999999999999987766544

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.57  E-value=0.001  Score=60.53  Aligned_cols=103  Identities=7%  Similarity=-0.103  Sum_probs=74.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhh---HHHHHHH-HHHHHHHhhHhcccCchHHHHHHhhcchHHHHHH
Q 021258           15 SLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYK---YCLVSMS-NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIW   90 (315)
Q Consensus        15 p~~lt~~q~l~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll   90 (315)
                      |... ..+.+++.+++.+..........  .++..   .+..+++ ..++..+.++++++++.+.+.++.+..|++..++
T Consensus       176 ~~~~-~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~  252 (293)
T PRK10532        176 PATV-AIGSLIAALIFVPIGALQAGEAL--WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVS  252 (293)
T ss_pred             chHH-HHHHHHHHHHHHHHHHHccCccc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHH
Confidence            3344 45555666555544433322111  11111   2345555 4566778999999999999999999999999999


Q ss_pred             HHHHhccccChhhHHHHHHHHHhHHHHhcC
Q 021258           91 GTLIMQKRYKGYDYFLALLVTLGCSIFILF  120 (315)
Q Consensus        91 ~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~  120 (315)
                      ++++++|+++..+++|..++++|++.....
T Consensus       253 ~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        253 GMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999887665

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.56  E-value=0.00094  Score=54.28  Aligned_cols=104  Identities=12%  Similarity=0.137  Sum_probs=77.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcCCC-C-----CCC-----c---hhhHHHHHHHHHHHHHHhhHhcccCchHHHHHH
Q 021258           14 YSLFLVFCNRLMTSAVSAGTLIASRKAI-D-----PVA-----P---VYKYCLVSMSNILTTTCQYEALKYVSFPVQTLA   79 (315)
Q Consensus        14 ~p~~lt~~q~l~~~l~~~~~~~~~~~~~-~-----~~~-----~---~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l   79 (315)
                      .|..+.......+.+.+.+.....+... .     ...     +   +...+..|++....+...+..++++++-++.++
T Consensus        34 ~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~  113 (153)
T PF03151_consen   34 NPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVL  113 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHH
Confidence            4666777777777777766544332211 0     000     1   111234456677888999999999999999999


Q ss_pred             hhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHH
Q 021258           80 KCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF  117 (315)
Q Consensus        80 ~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~  117 (315)
                      ...+-+.+.++++++++|+++..++.|+.++++|+.+.
T Consensus       114 ~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen  114 GNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            99999999999999999999999999999999998754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.53  E-value=0.00081  Score=59.50  Aligned_cols=73  Identities=11%  Similarity=0.167  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhcccc
Q 021258          212 LLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS  284 (315)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~  284 (315)
                      .-+++-.+.+.+.+.++++.+|.+..+...++.+++.++++++++++++..||.+..+...|+.+.+......
T Consensus        22 vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   22 VPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            3355666777889999999999999999999999999999999999999999999999999999887655533

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.48  E-value=0.0013  Score=50.76  Aligned_cols=66  Identities=14%  Similarity=0.207  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHHHhhhChHH-HHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhc
Q 021258          216 VATTSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK  281 (315)
Q Consensus       216 ~~~~~~~~~~~~~~~~~a~~-~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k  281 (315)
                      +-.++.++...++|+.+-.. .++-.-+..+.+.++++++|||++++.+++|+.+++.|++.-...+
T Consensus        39 ~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34455566778888888776 4555678889999999999999999999999999999988765433

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.44  E-value=0.00093  Score=52.26  Aligned_cols=72  Identities=10%  Similarity=0.043  Sum_probs=59.6

Q ss_pred             hHHHHHHHHHHHHHHhhHhcccCchH-HHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcC
Q 021258           49 KYCLVSMSNILTTTCQYEALKYVSFP-VQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  120 (315)
Q Consensus        49 ~~~~~~~~~~~~~~l~~~al~~v~~~-~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~  120 (315)
                      .....-+++..+.++...+++++|.+ .+.+......+.+.+++.++++|++++.+++++.++++|++++-..
T Consensus        32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            44555566778889999999999987 4566566778889999999999999999999999999999877543

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.34  E-value=0.0013  Score=52.23  Aligned_cols=71  Identities=15%  Similarity=0.180  Sum_probs=56.4

Q ss_pred             HHHHHHH-HHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHHHH--HhccccChhhHHHHHHHHHhHHHHhcC
Q 021258           50 YCLVSMS-NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTL--IMQKRYKGYDYFLALLVTLGCSIFILF  120 (315)
Q Consensus        50 ~~~~~~~-~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~l--~~~~~~~~~~~~~l~l~~~Gv~l~~~~  120 (315)
                      ++..|+. +.++..+.+.+++.+|.+.+--+.+..+..+++.++.  +++|++++.+++|++++++|+.++..+
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            4455654 6778889999999999876655556666667777764  799999999999999999999987543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.32  E-value=5.6e-05  Score=65.35  Aligned_cols=209  Identities=8%  Similarity=0.098  Sum_probs=130.6

Q ss_pred             HHHHHHHHHHHHhhHhcccCchHHHHHHh-hcchHHHHHHHHHHhccccChhh----HHHHHHHHHhHHHHhcCCCCCCC
Q 021258           52 LVSMSNILTTTCQYEALKYVSFPVQTLAK-CAKMIPVMIWGTLIMQKRYKGYD----YFLALLVTLGCSIFILFPSGADL  126 (315)
Q Consensus        52 ~~~~~~~~~~~l~~~al~~v~~~~~~~l~-~~~p~~~~ll~~l~~~~~~~~~~----~~~l~l~~~Gv~l~~~~~~~~~~  126 (315)
                      +-|++...+-...+.|.+++.++-++=+. .+..+-+-+.+++.++|-.+..+    ..++++.++|+.+.++.|.+ +.
T Consensus        64 isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~-nk  142 (288)
T COG4975          64 ISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN-NK  142 (288)
T ss_pred             HhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc-cc
Confidence            44566788888999999997554332211 12234466778888999888776    46888999999988776431 11


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHH-HHHhCchhHHhHhhhhChH
Q 021258          127 SPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSG-LILEGHLFLAIDFVYHHLD  205 (315)
Q Consensus       127 ~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  205 (315)
                      +  .++.++.-.|+..++.|.+.|-.|.+..+.    .+.+.....+-++ .+.+..... .....+-       ..+..
T Consensus       143 ~--~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~----f~v~g~saiLPqA-iGMv~~ali~~~~~~~~-------~~~K~  208 (288)
T COG4975         143 E--EENPSNLKKGIVILLISTLGYVGYVVLFQL----FDVDGLSAILPQA-IGMVIGALILGFFKMEK-------RFNKY  208 (288)
T ss_pred             c--ccChHhhhhheeeeeeeccceeeeEeeecc----ccccchhhhhHHH-HHHHHHHHHHhhccccc-------chHHH
Confidence            1  112345567888888888888777765432    2345444444332 233332222 1111110       11222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhh----hhHHHHHHHHHh
Q 021258          206 CFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQC----IGSIIVFGALYT  276 (315)
Q Consensus       206 ~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~----iG~~lvl~gv~~  276 (315)
                      .|.. +.-++.=..++++++.+.++.+-.+.=..+.+..+.+.+-+.++++|+-|..++    +|+++++.|..+
T Consensus       209 t~~n-ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~  282 (288)
T COG4975         209 TWLN-IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL  282 (288)
T ss_pred             HHHH-HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence            3332 233555567888888888777777766667778889999999999999888764    677777755433

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.30  E-value=0.002  Score=49.56  Aligned_cols=68  Identities=12%  Similarity=0.115  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHhhHhcccCchH-HHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHH
Q 021258           50 YCLVSMSNILTTTCQYEALKYVSFP-VQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF  117 (315)
Q Consensus        50 ~~~~~~~~~~~~~l~~~al~~v~~~-~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~  117 (315)
                      ....-+.+..+.++-..++|++|.+ .+.+-.....+.+.+++.++++|++++.|++++.++++|+++.
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            3444555677788888999999986 4566666677789999999999999999999999999999764

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.28  E-value=0.0094  Score=45.80  Aligned_cols=62  Identities=10%  Similarity=0.134  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHHHHhhhChHH-HHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhh
Q 021258          216 VATTSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  277 (315)
Q Consensus       216 ~~~~~~~~~~~~~~~~~a~~-~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~  277 (315)
                      +..++.++...++|+.+-.. .++-.-+..+.+.+.++++|+|++++.+++|+.++++|++.-
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            44456677788889888776 677778888999999999999999999999999999998764

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.24  E-value=0.0024  Score=48.43  Aligned_cols=71  Identities=13%  Similarity=0.060  Sum_probs=58.7

Q ss_pred             hhHHHHHHHHHHHHHHhhHhcccCchH-HHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHh
Q 021258           48 YKYCLVSMSNILTTTCQYEALKYVSFP-VQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI  118 (315)
Q Consensus        48 ~~~~~~~~~~~~~~~l~~~al~~v~~~-~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~  118 (315)
                      +..+..-+++..+..+-..|++++|.+ .+.+-.....+.+.+.++++++|+.+..+++++.+.++|++..-
T Consensus        31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence            344555556677788888999999996 56676777778899999999999999999999999999998753

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.23  E-value=0.0025  Score=48.62  Aligned_cols=69  Identities=10%  Similarity=0.038  Sum_probs=57.2

Q ss_pred             hHHHHHHHHHHHHHHhhHhcccCchH-HHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHH
Q 021258           49 KYCLVSMSNILTTTCQYEALKYVSFP-VQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF  117 (315)
Q Consensus        49 ~~~~~~~~~~~~~~l~~~al~~v~~~-~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~  117 (315)
                      ..+..-+++..+.++-..++|.+|.+ .+.+-.....+.+.++++++++|+.++.+++++.++++|+++.
T Consensus        31 ~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         31 PSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            33444556777888888999999986 4566666777789999999999999999999999999999875

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.20  E-value=0.0053  Score=54.70  Aligned_cols=117  Identities=15%  Similarity=0.135  Sum_probs=76.3

Q ss_pred             cCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHH-
Q 021258          163 GYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMT-  241 (315)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~-  241 (315)
                      |.+-+|.++++-+..-+.++.+...++.....      ..++..+..-+..+++=.++|...+.+.++.+.+.+-.+++ 
T Consensus         7 k~gG~~~~Q~lG~t~Gali~alv~~~~~~p~~------~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg   80 (269)
T PF06800_consen    7 KIGGKPANQILGTTIGALIFALVVFLFRQPAF------SMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTG   80 (269)
T ss_pred             eeCCcHHHHHHHHHHHHHHHHHHHHHHhCCCc------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchh
Confidence            33456777766555544444444333322110      11224444444456666789999999999999998877774 


Q ss_pred             HHHHHHHHHHHHHccCCCcchhh----hhHHHHHHHHHhhhhhccccC
Q 021258          242 TRQLVSIVLSCVWFRHPLSWEQC----IGSIIVFGALYTRSFFKKVSE  285 (315)
Q Consensus       242 l~~v~~~ils~l~f~e~~t~~~~----iG~~lvl~gv~~~~~~k~~~~  285 (315)
                      ++-+.+.++++++|||.-+..++    +++++++.|++++.+.+++++
T Consensus        81 ~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~  128 (269)
T PF06800_consen   81 LQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSD  128 (269)
T ss_pred             HHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccccc
Confidence            56666889999999997776654    366677789999887666544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.18  E-value=0.0031  Score=48.64  Aligned_cols=69  Identities=9%  Similarity=0.042  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHhhHhcccCchHH-HHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhc
Q 021258           51 CLVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFIL  119 (315)
Q Consensus        51 ~~~~~~~~~~~~l~~~al~~v~~~~-~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~  119 (315)
                      ...-+++.++..+...+++.+|.+. +.+-.....+.+.++++++++|++++.+++++.++++|+++.-.
T Consensus        34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3444556777788889999999874 44545556677899999999999999999999999999988744

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.10  E-value=0.0057  Score=46.70  Aligned_cols=63  Identities=8%  Similarity=0.121  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHHHHhhhChHH-HHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhh
Q 021258          216 VATTSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  278 (315)
Q Consensus       216 ~~~~~~~~~~~~~~~~~a~~-~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~  278 (315)
                      +-.++.++...++|+.+-.. .++-.-+..+.+.+.++++|||++++.+++|+.+++.|++.-+
T Consensus        38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            44556677778888888766 6777788999999999999999999999999999999987643

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.02  E-value=0.0063  Score=46.18  Aligned_cols=64  Identities=13%  Similarity=0.186  Sum_probs=53.7

Q ss_pred             HHHHHHHHHHHHHhhhChHH-HHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhh
Q 021258          216 VATTSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  279 (315)
Q Consensus       216 ~~~~~~~~~~~~~~~~~a~~-~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~  279 (315)
                      +-..++.+...++|+.+-.. .++-.-...+.+.+.|+++|+|++++.+++|+.++++|++.-..
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            34455667778889888766 78888889999999999999999999999999999999876543

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=96.80  E-value=0.082  Score=42.48  Aligned_cols=131  Identities=13%  Similarity=0.143  Sum_probs=83.8

Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHHH
Q 021258          140 VSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT  219 (315)
Q Consensus       140 ~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  219 (315)
                      +++.+.+..+-++...+..++.++.+ ++..-.+..+..+++.+....++.++.  ........|  |+. ..-++++.+
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p--~w~-~lGG~lG~~   76 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP--SLASLSSVP--WWA-YLGGLLGVF   76 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCC--hHH-hccHHHHHH
Confidence            34455555566666667777766544 577777777778887776665554432  111111112  221 123667777


Q ss_pred             HHHHHHHHHhhhChHHHHHHHHHHH-HHHHHHHHH----HccCCCcchhhhhHHHHHHHHHh
Q 021258          220 SQFFISYTIRTFGALTFATIMTTRQ-LVSIVLSCV----WFRHPLSWEQCIGSIIVFGALYT  276 (315)
Q Consensus       220 ~~~~~~~~~~~~~a~~~si~~~l~~-v~~~ils~l----~f~e~~t~~~~iG~~lvl~gv~~  276 (315)
                      .-.+....+++.++..+........ +.+.++..+    .-.+++++..++|.++++.|+.+
T Consensus        77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            6677788889999998776665544 455555654    23568999999999999999763

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.80  E-value=0.0084  Score=54.72  Aligned_cols=119  Identities=13%  Similarity=0.054  Sum_probs=82.7

Q ss_pred             CchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHH
Q 021258          134 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALL  213 (315)
Q Consensus       134 ~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  213 (315)
                      .+...|+++++.++++.+...++||+-.+|.+.+....                   ++  +..+. ..++ .|+.-+..
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~-------------------~~--~~~~~-l~~~-~W~~G~~~   59 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA-------------------GS--GGRSY-LRRP-LWWIGLLL   59 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-------------------cc--hhhHH-HhhH-HHHHHHHH
Confidence            46788999999999999999999888655432111000                   00  00000 0122 23322221


Q ss_pred             HHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhh
Q 021258          214 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  278 (315)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~  278 (315)
                         ..+++.+.+.++...+++..+..+.+.-+++.+++..+++|+++...+.|.++++.|.....
T Consensus        60 ---~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   60 ---MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             ---HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence               23444555678888999999999999999999999999999999999999999998865544

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.60  E-value=0.0013  Score=57.14  Aligned_cols=135  Identities=13%  Similarity=0.027  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHH
Q 021258          139 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT  218 (315)
Q Consensus       139 G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  218 (315)
                      .++.+++=++.|+......    .|.+-+|.++..-+.+-+.++.+..+++....        .+...+..-+..+.+=.
T Consensus         3 ~~liaL~P~l~WGsip~v~----~k~GG~p~qQ~lGtT~GALifaiiv~~~~~p~--------~T~~~~iv~~isG~~Ws   70 (288)
T COG4975           3 DLLIALLPALGWGSIPLVA----NKFGGKPYQQTLGTTLGALIFAIIVFLFVSPE--------LTLTIFIVGFISGAFWS   70 (288)
T ss_pred             hHHHHHHHHHHhcccceee----eecCCChhHhhhhccHHHHHHHHHHheeecCc--------cchhhHHHHHHhhhHhh
Confidence            3556667777887765443    23345677776655444444443332222111        12233333333344456


Q ss_pred             HHHHHHHHHHhhhChHHHHHHHH-HHHHHHHHHHHHHccCCCcchhhh----hHHHHHHHHHhhhhhccccC
Q 021258          219 TSQFFISYTIRTFGALTFATIMT-TRQLVSIVLSCVWFRHPLSWEQCI----GSIIVFGALYTRSFFKKVSE  285 (315)
Q Consensus       219 ~~~~~~~~~~~~~~a~~~si~~~-l~~v~~~ils~l~f~e~~t~~~~i----G~~lvl~gv~~~~~~k~~~~  285 (315)
                      ++|...+.+++..+.+.+..+++ ++-+-+.++++++|+|-.++.+.+    ..++++.|++.+.+.+|+++
T Consensus        71 ~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk  142 (288)
T COG4975          71 FGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNK  142 (288)
T ss_pred             hhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccc
Confidence            78988999999999888777665 566778899999999988887653    44455678888876665443

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.46  E-value=0.013  Score=51.83  Aligned_cols=67  Identities=19%  Similarity=0.194  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHhhhChHH-HHHHHHHHHHHHHHHHHH-HccCC-----CcchhhhhHHHHHHHHHhhhhhcccc
Q 021258          218 TTSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCV-WFRHP-----LSWEQCIGSIIVFGALYTRSFFKKVS  284 (315)
Q Consensus       218 ~~~~~~~~~~~~~~~a~~-~si~~~l~~v~~~ils~l-~f~e~-----~t~~~~iG~~lvl~gv~~~~~~k~~~  284 (315)
                      +.++.+..-.+|..+=.. ..+-+..+-+.+...|.+ +||.+     -.++.++|.++++.|..++..-|.++
T Consensus        66 ~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   66 ATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             hcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            345555555555555333 444555566677776655 56542     45678999999988776666555444

The region concerned is approximately 280 residues long.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.39  E-value=0.031  Score=41.66  Aligned_cols=57  Identities=12%  Similarity=0.064  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHhhHhcccCchH-HHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHH
Q 021258           54 SMSNILTTTCQYEALKYVSFP-VQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLV  110 (315)
Q Consensus        54 ~~~~~~~~~l~~~al~~v~~~-~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~  110 (315)
                      -.++..+..+...+++++|.+ .+.+......+.+.+++.++++|+++..|++++.++
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            335777788899999999987 456667778888999999999999999999998653

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.38  E-value=0.016  Score=43.22  Aligned_cols=55  Identities=15%  Similarity=0.190  Sum_probs=32.6

Q ss_pred             HHHHHHHHHHHHHhhhChHHH-HHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHH
Q 021258          216 VATTSQFFISYTIRTFGALTF-ATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV  270 (315)
Q Consensus       216 ~~~~~~~~~~~~~~~~~a~~~-si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lv  270 (315)
                      +-.++.+++..++|+.+...+ .+..-+..+.+.+.|+++|||++|+.+++|+.++
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            344566788889999998886 6666789999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.24  E-value=0.38  Score=44.29  Aligned_cols=69  Identities=13%  Similarity=0.191  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhcccc
Q 021258          216 VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS  284 (315)
Q Consensus       216 ~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~  284 (315)
                      +-++=+.+.+.+..+.+|.+..+...++...+.+++++++++.+++.||...++...|+.+.+.....+
T Consensus       101 iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~  169 (345)
T KOG2234|consen  101 IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSP  169 (345)
T ss_pred             HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCC
Confidence            333444677889999999999999999999999999999999999999999999999999988544433

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.99  E-value=0.099  Score=42.01  Aligned_cols=102  Identities=9%  Similarity=0.117  Sum_probs=71.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcCC-CC--CCCchhhHHHHHHHHHHHHHHhhHhcccCchHHHHHH-hhcchHHHHH
Q 021258           14 YSLFLVFCNRLMTSAVSAGTLIASRKA-ID--PVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLA-KCAKMIPVMI   89 (315)
Q Consensus        14 ~p~~lt~~q~l~~~l~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l-~~~~p~~~~l   89 (315)
                      +|..-+++.+.++.+.+.++...++++ .+  ++.||+.|+ -|++......+...+...+..+..+++ -....+..++
T Consensus        29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~  107 (138)
T PF04657_consen   29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLL  107 (138)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence            578888899999999888777665542 21  234544444 666777777888888888877544333 3334455666


Q ss_pred             HHHH----HhccccChhhHHHHHHHHHhHHH
Q 021258           90 WGTL----IMQKRYKGYDYFLALLVTLGCSI  116 (315)
Q Consensus        90 l~~l----~~~~~~~~~~~~~l~l~~~Gv~l  116 (315)
                      ++.+    .-|+++++++.++++++++|+.+
T Consensus       108 iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen  108 IDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            6665    34799999999999999999863

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.98  E-value=0.014  Score=45.08  Aligned_cols=68  Identities=12%  Similarity=0.152  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHHHhhHhcccCchHHH-HHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHH
Q 021258           50 YCLVSMSNILTTTCQYEALKYVSFPVQ-TLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF  117 (315)
Q Consensus        50 ~~~~~~~~~~~~~l~~~al~~v~~~~~-~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~  117 (315)
                      |...=+++..+....++.+...+.+.+ -+.+++..++|++.++++.+|..+++.++|+.+++.|+.+.
T Consensus        44 y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   44 YIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            333334577778888888888777643 34478889999999999999999999999999999998763

Many members are annotated as potential transmembrane proteins.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=95.82  E-value=0.26  Score=45.19  Aligned_cols=145  Identities=10%  Similarity=0.044  Sum_probs=82.4

Q ss_pred             CchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHH---HHhCchhHHhHhhhhCh-HHHHH
Q 021258          134 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGL---ILEGHLFLAIDFVYHHL-DCFFD  209 (315)
Q Consensus       134 ~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~  209 (315)
                      ..-..|+++..++.++.+...+=.||. |++   ++|..-....+-..+..|..   +..+++.+   .....| +.+..
T Consensus         3 ~~ii~Gii~h~iGg~~~~sfy~P~kkv-k~W---sWEs~Wlv~gi~swli~P~~~a~l~ip~~~~---i~~~~~~~~l~~   75 (344)
T PF06379_consen    3 SAIILGIIFHAIGGFASGSFYVPFKKV-KGW---SWESYWLVQGIFSWLIVPWLWALLAIPDFFS---IYSATPASTLFW   75 (344)
T ss_pred             chHHHHHHHHHHHHHHhhhhccchhhc-CCc---cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHH---HHHhCChhHHHH
Confidence            355789999999999988877765554 333   23443322222223333432   22233322   222222 33333


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhChHH-HHHHHHHHHHHHHHHHHHHcc-------CCCcchhhhhHHHHHHHHHhhhhhc
Q 021258          210 VALLSTVATTSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFR-------HPLSWEQCIGSIIVFGALYTRSFFK  281 (315)
Q Consensus       210 l~~~~~~~~~~~~~~~~~~~~~~a~~-~si~~~l~~v~~~ils~l~f~-------e~~t~~~~iG~~lvl~gv~~~~~~k  281 (315)
                      ....++.=.++.+.+-.++++.+-+. .++..-+-.++..++--++.|       ++-....++|.++.+.|+.+..+..
T Consensus        76 ~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG  155 (344)
T PF06379_consen   76 TFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAG  155 (344)
T ss_pred             HHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHH
Confidence            34445544456666677788877554 555555555555555444433       2334467899999999999888765


Q ss_pred             cccC
Q 021258          282 KVSE  285 (315)
Q Consensus       282 ~~~~  285 (315)
                      .+|+
T Consensus       156 ~~Ke  159 (344)
T PF06379_consen  156 SMKE  159 (344)
T ss_pred             Hhhh
Confidence            5444

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=95.69  E-value=0.0035  Score=55.08  Aligned_cols=68  Identities=13%  Similarity=0.244  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhh
Q 021258          212 LLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  279 (315)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~  279 (315)
                      +-|+.+..+-+..++++++.+-..++++....|++++++++.+++|+.|.....|..+.+.|+++-.+
T Consensus       102 LRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvR  169 (346)
T KOG4510|consen  102 LRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVR  169 (346)
T ss_pred             eehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEec
Confidence            34777777888889999999999999999999999999999999999999999999999999877653

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=94.71  E-value=0.028  Score=47.31  Aligned_cols=66  Identities=8%  Similarity=0.201  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhcccc
Q 021258          219 TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS  284 (315)
Q Consensus       219 ~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~  284 (315)
                      .+++.|..++++.+|+.++.+...+..+..+++++++||++....+...++.++|++.-.|..+.+
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~  130 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH  130 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh
Confidence            567889999999999999999999999999999999999999999999999999988777655433

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=94.64  E-value=0.3  Score=42.95  Aligned_cols=59  Identities=8%  Similarity=-0.013  Sum_probs=52.9

Q ss_pred             HHHhhHhcccCchHHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhc
Q 021258           61 TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFIL  119 (315)
Q Consensus        61 ~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~  119 (315)
                      ..+...+++.+|..++.++-+..|.+..+.++++++|+++..||+++..++.+.+-...
T Consensus       224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence            46788899999999999999999999999999999999999999999999988775444

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.25  E-value=1.9  Score=35.05  Aligned_cols=137  Identities=11%  Similarity=0.095  Sum_probs=74.2

Q ss_pred             hHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHH
Q 021258          138 WGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVA  217 (315)
Q Consensus       138 ~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  217 (315)
                      ...++.+.+..+-.+......++.+..+ +|.--.+..+..+++.+.......... ...+..  .+.-|+.. .-|+++
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~-~~~a~~--~~~pwW~~-~GG~lG   79 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGH-PGLAAV--ASAPWWAW-IGGLLG   79 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCC-Cchhhc--cCCchHHH-Hccchh
Confidence            3455556666666666666667755443 566666666677777666554442211 111111  11123221 112333


Q ss_pred             HHHHHHHHHHHhhhChHHH-HHHHHHHHHHHHHHHHHHc-c---CCCcchhhhhHHHHHHHHHhhhh
Q 021258          218 TTSQFFISYTIRTFGALTF-ATIMTTRQLVSIVLSCVWF-R---HPLSWEQCIGSIIVFGALYTRSF  279 (315)
Q Consensus       218 ~~~~~~~~~~~~~~~a~~~-si~~~l~~v~~~ils~l~f-~---e~~t~~~~iG~~lvl~gv~~~~~  279 (315)
                      .+.-........+.++++. .++-.-+-+.+.++..+=+ |   .++++..++|++++++|+.+...
T Consensus        80 a~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          80 AIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             hhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            2222222344566666664 4444455556666665533 2   47999999999999999666543

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=94.12  E-value=0.093  Score=40.48  Aligned_cols=60  Identities=5%  Similarity=0.050  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHHHhhhChHHHHHH-HHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHh
Q 021258          217 ATTSQFFISYTIRTFGALTFATI-MTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT  276 (315)
Q Consensus       217 ~~~~~~~~~~~~~~~~a~~~si~-~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~  276 (315)
                      .-.+...++..+.+.+=+.+..+ +.+.-+++.+.++++.+|..+...++|.++++.|+.+
T Consensus        51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            44566677888888888776666 6899999999999999889999999999999999754

Many members are annotated as potential transmembrane proteins.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=93.13  E-value=0.23  Score=45.93  Aligned_cols=71  Identities=3%  Similarity=0.095  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhcc
Q 021258          212 LLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  282 (315)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~  282 (315)
                      .++..=+++++.+..++++++....+++....-.|++.++.++-+|++|+..+++..+-++|+++....+.
T Consensus       164 ~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s  234 (416)
T KOG2765|consen  164 FFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDS  234 (416)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccc
Confidence            34444567788888899999999999999999999999999999999999999999999999988876654

>TIGR00803 nst UDP-galactose transporter

Probab=92.75  E-value=0.27  Score=42.61  Aligned_cols=62  Identities=15%  Similarity=0.216  Sum_probs=51.1

Q ss_pred             HHHHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHH
Q 021258           55 MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSI  116 (315)
Q Consensus        55 ~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l  116 (315)
                      +....+-.+....++|.+..+..+...+.++++.+++.++++++++..++.+..+++.|+.+
T Consensus       160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            34445556666777888877778888889999999999999999999999999999988653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=91.10  E-value=5.7  Score=36.18  Aligned_cols=133  Identities=13%  Similarity=0.109  Sum_probs=80.9

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHccCCCCh-HHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHH
Q 021258          139 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEI-HNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVA  217 (315)
Q Consensus       139 G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  217 (315)
                      ....++..++++.+..+..|....+|+.+. ...+++++..+.+.....-.. + +.+..++-....+.|..+-.+   -
T Consensus        13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~-lv~~~~l~~~~~kk~~P~~~l---f   87 (314)
T KOG1444|consen   13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-G-LVNFRPLDLRTAKKWFPVSLL---F   87 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-c-eeecCCcChHHHHHHccHHHH---H
Confidence            344455556666666667777777776543 555667777766554332111 1 101001111122333221111   1


Q ss_pred             HHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHh
Q 021258          218 TTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT  276 (315)
Q Consensus       218 ~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~  276 (315)
                      ..-.+.-.+.+|+.+-....++..+.++++.+...++++..++...+.....+++|...
T Consensus        88 ~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~  146 (314)
T KOG1444|consen   88 VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVA  146 (314)
T ss_pred             HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHh
Confidence            11112234578999999999999999999999999999999999999999888876543

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=90.97  E-value=0.39  Score=44.05  Aligned_cols=70  Identities=11%  Similarity=0.054  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHH
Q 021258          206 CFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALY  275 (315)
Q Consensus       206 ~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~  275 (315)
                      .+..++-++++-.++..+...++++.+-+.+-++..++|+++.++++++.+|+.+...+.-.+.+..|+.
T Consensus        82 ~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~  151 (316)
T KOG1441|consen   82 PLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVA  151 (316)
T ss_pred             chHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEE
Confidence            4566666777777788788889999999999999999999999999999999988765544444444433

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=90.85  E-value=0.29  Score=42.53  Aligned_cols=73  Identities=8%  Similarity=0.182  Sum_probs=57.4

Q ss_pred             hhhHHHHHHHHHHHHHHhhHhcccCchHHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhc
Q 021258           47 VYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFIL  119 (315)
Q Consensus        47 ~~~~~~~~~~~~~~~~l~~~al~~v~~~~~~~l~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~  119 (315)
                      +++....+++..++-++.+.-..+..+-+..+...+.-+||.+.+.+++..+.+.+||++..+++.|+..-..
T Consensus       241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            4455677777777888888777776554444555666788999999999999999999999999999876543

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.31  E-value=5.2  Score=32.51  Aligned_cols=104  Identities=12%  Similarity=0.075  Sum_probs=62.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhcCCCC----CCCchhhHHHHHHHHHHHHHHhhHhcccCchH-HHHHHhhcchHHH
Q 021258           13 KYSLFLVFCNRLMTSAVSAGTLIASRKAID----PVAPVYKYCLVSMSNILTTTCQYEALKYVSFP-VQTLAKCAKMIPV   87 (315)
Q Consensus        13 ~~p~~lt~~q~l~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~al~~v~~~-~~~~l~~~~p~~~   87 (315)
                      .+|..-.+..++++++.+.++...+.++.+    .+.|||.++ -|++.......+......+..+ +..+.-+...+.-
T Consensus        32 ~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~-GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~g  110 (150)
T COG3238          32 GSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWI-GGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMG  110 (150)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHH-ccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHH
Confidence            468888888999988888777665433221    234554443 2333333334444444444443 3333334444555


Q ss_pred             HHHHHH-Hh---ccccChhhHHHHHHHHHhHHHH
Q 021258           88 MIWGTL-IM---QKRYKGYDYFLALLVTLGCSIF  117 (315)
Q Consensus        88 ~ll~~l-~~---~~~~~~~~~~~l~l~~~Gv~l~  117 (315)
                      ++++.+ ++   ++++++.++.+++++++|+.++
T Consensus       111 lliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238         111 LLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             HHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            555544 22   6999999999999999995544

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=89.48  E-value=17  Score=33.56  Aligned_cols=229  Identities=10%  Similarity=-0.058  Sum_probs=110.3

Q ss_pred             hHHHHHHHHHHHHHHhhHhcccCchH--HHHHHhhcchHHHHHHHHH------HhccccChhhHHHHHHHHHhHHHHhcC
Q 021258           49 KYCLVSMSNILTTTCQYEALKYVSFP--VQTLAKCAKMIPVMIWGTL------IMQKRYKGYDYFLALLVTLGCSIFILF  120 (315)
Q Consensus        49 ~~~~~~~~~~~~~~l~~~al~~v~~~--~~~~l~~~~p~~~~ll~~l------~~~~~~~~~~~~~l~l~~~Gv~l~~~~  120 (315)
                      ...+.|++..++....=.+.||+..+  ..+.+-.|..+=|++=-.+      ++.++-....+++++++++|+++....
T Consensus        75 ~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   75 WTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            33556777777766666788986543  3444444332222211111      122333457799999999999988765


Q ss_pred             CCCCCCCCCC-CCCCchhhHHHHHHHHHHhhhhhHHHHHHH------HccCCCChHHHH----HHHHHHHHHHHHHHHHH
Q 021258          121 PSGADLSPYS-KGRENTVWGVSLMVGYLGFDGFTSTFQDKL------FKGYDMEIHNQI----FYTTLCSCVLSLSGLIL  189 (315)
Q Consensus       121 ~~~~~~~~~~-~~~~~~~~G~~~~~~s~~~~a~~~v~~~~l------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  189 (315)
                      ...+|.+.+. .++.+.-.|++.++++.+.+++.+.-.+.=      -.+.+.++....    .....-+.+..+.++++
T Consensus       155 G~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~~  234 (344)
T PF06379_consen  155 GSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCLI  234 (344)
T ss_pred             HHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHHH
Confidence            4333321111 112334579999988888887766432210      011223321111    01111122233333322


Q ss_pred             h----CchhHHhHhhhhChHHHHHHHHHHHHHHH--HHHHHH-HHHh----hhChHHHHHHHHHHHHHHHHHHHHHccC-
Q 021258          190 E----GHLFLAIDFVYHHLDCFFDVALLSTVATT--SQFFIS-YTIR----TFGALTFATIMTTRQLVSIVLSCVWFRH-  257 (315)
Q Consensus       190 ~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~-~~~~----~~~a~~~si~~~l~~v~~~ils~l~f~e-  257 (315)
                      -    .+....-|+....+......+...+.+.+  .|++.+ .+-.    ..+.+.-.+...+..+++-+++.+. +| 
T Consensus       235 ~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~l-kEW  313 (344)
T PF06379_consen  235 LLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLIL-KEW  313 (344)
T ss_pred             HHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHH-HHh
Confidence            1    01000001101112222233333333333  232222 2222    2346667778888888888888854 44 


Q ss_pred             -----CCcchhhhhHHHHHHHHHhhh
Q 021258          258 -----PLSWEQCIGSIIVFGALYTRS  278 (315)
Q Consensus       258 -----~~t~~~~iG~~lvl~gv~~~~  278 (315)
                           +.-..-++|+++++.++.+.-
T Consensus       314 Kg~s~kt~~vl~~G~~vlI~s~~ivG  339 (344)
T PF06379_consen  314 KGASKKTIRVLVLGIAVLILSVVIVG  339 (344)
T ss_pred             ccCCcccHHHHHHHHHHHHHHHHHHh
Confidence                 222335788888777766543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=89.47  E-value=9.1  Score=34.77  Aligned_cols=125  Identities=12%  Similarity=0.118  Sum_probs=86.3

Q ss_pred             hHHHHHHHHcc-CC------CChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHHHHHHHHHHHHHHHHHH
Q 021258          153 TSTFQDKLFKG-YD------MEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFIS  225 (315)
Q Consensus       153 ~~v~~~~l~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  225 (315)
                      ..++|||+..+ |+      .++.-+.+-+.+.+.++....+  .+ .    ........-|.-.-+.++.+.++..+.+
T Consensus        29 ~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l--~~-~----k~~~~~~apl~~y~~is~tn~~s~~~~y  101 (327)
T KOG1581|consen   29 WGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAML--KW-W----KKELSGVAPLYKYSLISFTNTLSSWCGY  101 (327)
T ss_pred             HHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHH--hc-c----cccCCCCCchhHHhHHHHHhhcchHHHH
Confidence            45789998653 41      2345555555555555543322  11 0    0001112224444455677778888889


Q ss_pred             HHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhcccc
Q 021258          226 YTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS  284 (315)
Q Consensus       226 ~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~~~  284 (315)
                      .++|++|=-+..+.-..|-+-..+++.++.+.+.++....=..+|-+|+.+....++..
T Consensus       102 eaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~  160 (327)
T KOG1581|consen  102 EALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD  160 (327)
T ss_pred             HHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence            99999999999999999999999999999999999999988888888887777654433

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=87.58  E-value=1.4  Score=39.37  Aligned_cols=66  Identities=11%  Similarity=0.113  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhh
Q 021258          214 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  279 (315)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~  279 (315)
                      ++|-..+..+.+.++-.++|+..-+.--.-.+++-+++..+++.+++..+|.|+..+..|+++..+
T Consensus        93 al~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~  158 (372)
T KOG3912|consen   93 ALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS  158 (372)
T ss_pred             HHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence            566777777777788888888888888888899999999999999999999999999999876543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=86.80  E-value=0.24  Score=44.91  Aligned_cols=116  Identities=11%  Similarity=0.119  Sum_probs=77.6

Q ss_pred             CCchhhHHHHHHHHHHhhhhhHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhhChHHHHH-HH
Q 021258          133 RENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFD-VA  211 (315)
Q Consensus       133 ~~~~~~G~~~~~~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~  211 (315)
                      ..++..|.++...+.+.-+...+..||-.+|.+...  .-.               -+|.    ..+. .+ ..|+. ++
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~--~ra---------------~~gg----~~yl-~~-~~Ww~G~l   72 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASG--LRA---------------GEGG----YGYL-KE-PLWWAGML   72 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhc--ccc---------------cCCC----cchh-hh-HHHHHHHH
Confidence            367788999988888877777777666554432100  000               0111    0111 11 23332 22


Q ss_pred             HHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHH
Q 021258          212 LLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALY  275 (315)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~  275 (315)
                      .+    .+|...-|.++...+++..+..+.+..+.+.+++..+++|.+++...+|.++.+.|-+
T Consensus        73 tm----~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst  132 (335)
T KOG2922|consen   73 TM----IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGST  132 (335)
T ss_pred             HH----HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccE
Confidence            22    3455555677777899999999999999999999999999999999999999887643

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=83.83  E-value=3.1  Score=37.19  Aligned_cols=103  Identities=17%  Similarity=0.179  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCC-----CCchhhH---HHHHHHHHHH--HHHhhHhcccCchHHHHHHhhcchHH
Q 021258           17 FLVFCNRLMTSAVSAGTLIASRKAIDP-----VAPVYKY---CLVSMSNILT--TTCQYEALKYVSFPVQTLAKCAKMIP   86 (315)
Q Consensus        17 ~lt~~q~l~~~l~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~--~~l~~~al~~v~~~~~~~l~~~~p~~   86 (315)
                      ..+++-..+++.+++..+..+++-.+.     ..|++.|   ++.++...++  ..+..+.+--.  .++.+.....=..
T Consensus       222 EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA--~~aatvTTaRKav  299 (367)
T KOG1582|consen  222 EMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGA--LIAATVTTARKAV  299 (367)
T ss_pred             eEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhch--hHHHHHHHhHhHH
Confidence            334455556666666555555543221     2444433   2334443333  23444333222  2222222223344


Q ss_pred             HHHHHHHHhccccChhhHHHHHHHHHhHHHHhcCC
Q 021258           87 VMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP  121 (315)
Q Consensus        87 ~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~~  121 (315)
                      |.+++++++.|+++....-+.++++.|+.+-.+++
T Consensus       300 Ti~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  300 TILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            89999999999999999999999999999877763

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=82.56  E-value=0.71  Score=40.73  Aligned_cols=73  Identities=14%  Similarity=0.176  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhh
Q 021258          207 FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  279 (315)
Q Consensus       207 ~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~  279 (315)
                      |..-+++++...=++++...+.|+++-+.+.+...-..+...+++|++++.+-.+.++.|.++.++|++....
T Consensus        78 ~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~  150 (336)
T KOG2766|consen   78 WRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVF  150 (336)
T ss_pred             HHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEE
Confidence            4444455666666788888999999999999999999999999999999999999999999999999876553

>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional

Probab=81.64  E-value=32  Score=29.31  Aligned_cols=24  Identities=8%  Similarity=0.066  Sum_probs=17.8

Q ss_pred             HHHHHHHccCCCcchhhhhHHHHH
Q 021258          248 IVLSCVWFRHPLSWEQCIGSIIVF  271 (315)
Q Consensus       248 ~ils~l~f~e~~t~~~~iG~~lvl  271 (315)
                      -.+|..+|++..=+...+|..+.+
T Consensus       133 ~~iG~~L~t~y~l~fe~~silLLv  156 (198)
T PRK06638        133 KAIGILLFTDYLLPFELASVLLLV  156 (198)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344677777877788889988864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	315
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.87
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.36
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.08
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.02

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.87  E-value=3e-09  Score=84.30  Aligned_cols=68  Identities=13%  Similarity=0.184  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHHHHHhhhChHHHHHH-HHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhhcc
Q 021258          215 TVATTSQFFISYTIRTFGALTFATI-MTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  282 (315)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~a~~~si~-~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~k~  282 (315)
                      ++..++++++.+++|+.+++.+..+ ..+.|+++.++|+++|||++++.+++|++++++|++.....++
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~~  106 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSR  106 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            4566778899999999999999888 8999999999999999999999999999999999988775443

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.36  E-value=2.4e-06  Score=64.98  Aligned_cols=66  Identities=14%  Similarity=0.175  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHHhhhChHHHHHH-HHHHHHHHHHHHHHHccCCCcchhhhhHHHHHHHHHhhhhh
Q 021258          215 TVATTSQFFISYTIRTFGALTFATI-MTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  280 (315)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~a~~~si~-~~l~~v~~~ils~l~f~e~~t~~~~iG~~lvl~gv~~~~~~  280 (315)
                      ++..++.+++..++|+.+.+++..+ ..+.|+.+.++++++|||++|+.+++|+++++.|++.....
T Consensus        38 ~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3455677788889999999999888 89999999999999999999999999999999999877643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.08  E-value=1.5e-05  Score=60.49  Aligned_cols=70  Identities=10%  Similarity=0.045  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHhhHhcccCchHHHHHH-hhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcC
Q 021258           51 CLVSMSNILTTTCQYEALKYVSFPVQTLA-KCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  120 (315)
Q Consensus        51 ~~~~~~~~~~~~l~~~al~~v~~~~~~~l-~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~  120 (315)
                      +...+++.++..+...+++++|.+.+-.+ ....|+.+.++++++++|++++.|++++.++++|+.+....
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            33334567788888899999999866444 89999999999999999999999999999999999887654

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.02  E-value=1.8e-05  Score=62.43  Aligned_cols=68  Identities=10%  Similarity=0.068  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHHhhHhcccCchHHHHHH-hhcchHHHHHHHHHHhccccChhhHHHHHHHHHhHHHHhcC
Q 021258           53 VSMSNILTTTCQYEALKYVSFPVQTLA-KCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  120 (315)
Q Consensus        53 ~~~~~~~~~~l~~~al~~v~~~~~~~l-~~~~p~~~~ll~~l~~~~~~~~~~~~~l~l~~~Gv~l~~~~  120 (315)
                      ..+++.++..+.+.+++++|.+.+..+ ....|++++++++++++|++++.+++|+.++++|++++...
T Consensus        36 ~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            334577788999999999999855444 89999999999999999999999999999999999988664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00