Citrus Sinensis ID: 021334
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 314 | ||||||
| 224135763 | 528 | nucleobase ascorbate transporter [Populu | 0.945 | 0.562 | 0.856 | 1e-148 | |
| 145334873 | 476 | nucleobase-ascorbate transporter 6 [Arab | 0.952 | 0.628 | 0.844 | 1e-148 | |
| 15241994 | 532 | nucleobase-ascorbate transporter 6 [Arab | 0.952 | 0.562 | 0.844 | 1e-148 | |
| 356516694 | 531 | PREDICTED: nucleobase-ascorbate transpor | 0.952 | 0.563 | 0.847 | 1e-147 | |
| 356508649 | 531 | PREDICTED: nucleobase-ascorbate transpor | 0.952 | 0.563 | 0.847 | 1e-147 | |
| 255540763 | 531 | purine permease, putative [Ricinus commu | 0.929 | 0.549 | 0.870 | 1e-147 | |
| 224121656 | 529 | nucleobase ascorbate transporter [Populu | 0.949 | 0.563 | 0.853 | 1e-147 | |
| 297793879 | 532 | hypothetical protein ARALYDRAFT_496474 [ | 0.952 | 0.562 | 0.841 | 1e-147 | |
| 225457114 | 531 | PREDICTED: nucleobase-ascorbate transpor | 0.929 | 0.549 | 0.853 | 1e-146 | |
| 449440700 | 530 | PREDICTED: nucleobase-ascorbate transpor | 0.952 | 0.564 | 0.84 | 1e-146 |
| >gi|224135763|ref|XP_002322154.1| nucleobase ascorbate transporter [Populus trichocarpa] gi|222869150|gb|EEF06281.1| nucleobase ascorbate transporter [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 257/300 (85%), Positives = 285/300 (95%), Gaps = 3/300 (1%)
Query: 1 MAGGAAPKADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLV 60
MAGG KA+EP HP ++QLP+ISYC+TSPPPWPEAILLGFQHY+VMLGTTVLIP++LV
Sbjct: 1 MAGGG--KAEEPQAHPPREQLPNISYCMTSPPPWPEAILLGFQHYLVMLGTTVLIPSALV 58
Query: 61 PQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSN 120
PQMGGGN+EKA VIQTLLFVAGLNTLLQSLFGTRLPAV+GGSYTFVP+TISIIL+GRFS+
Sbjct: 59 PQMGGGNKEKADVIQTLLFVAGLNTLLQSLFGTRLPAVIGGSYTFVPTTISIILSGRFSD 118
Query: 121 YSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLY 180
DPVEKFKR MRAIQG+LIVASTLQIVLGFSGLWRNVTRFLSPLS VPL++LVGFGLY
Sbjct: 119 -EVDPVEKFKRIMRAIQGALIVASTLQIVLGFSGLWRNVTRFLSPLSAVPLVALVGFGLY 177
Query: 181 EFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTV 240
E GFPGVAKCVEIGLP+L+I+VF+SQY+PHVIK G++IFDRFAVIF+VVIVWIYAHLLTV
Sbjct: 178 ELGFPGVAKCVEIGLPELIILVFVSQYMPHVIKSGRHIFDRFAVIFAVVIVWIYAHLLTV 237
Query: 241 GGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVE 300
GGAYNDAAP+TQA CRTDRAGLIDAAPWIR+P+PFQWGAP+FDAGEAFAMMMASFVALVE
Sbjct: 238 GGAYNDAAPRTQAICRTDRAGLIDAAPWIRIPYPFQWGAPTFDAGEAFAMMMASFVALVE 297
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|145334873|ref|NP_001078782.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|222422853|dbj|BAH19413.1| AT5G62890 [Arabidopsis thaliana] gi|332010288|gb|AED97671.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|15241994|ref|NP_201094.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|79600443|ref|NP_851251.2| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|145323680|ref|NP_001032127.2| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|122064607|sp|Q27GI3.2|NAT6_ARATH RecName: Full=Nucleobase-ascorbate transporter 6; Short=AtNAT6 gi|21326025|gb|AAM47573.1|AF466198_1 putative permease 1 [Arabidopsis thaliana] gi|10177467|dbj|BAB10858.1| permease 1 [Arabidopsis thaliana] gi|332010285|gb|AED97668.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|332010286|gb|AED97669.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|332010287|gb|AED97670.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|356516694|ref|XP_003527028.1| PREDICTED: nucleobase-ascorbate transporter 6-like isoform 1 [Glycine max] gi|356516696|ref|XP_003527029.1| PREDICTED: nucleobase-ascorbate transporter 6-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356508649|ref|XP_003523067.1| PREDICTED: nucleobase-ascorbate transporter 6-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255540763|ref|XP_002511446.1| purine permease, putative [Ricinus communis] gi|223550561|gb|EEF52048.1| purine permease, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224121656|ref|XP_002318639.1| nucleobase ascorbate transporter [Populus trichocarpa] gi|222859312|gb|EEE96859.1| nucleobase ascorbate transporter [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|297793879|ref|XP_002864824.1| hypothetical protein ARALYDRAFT_496474 [Arabidopsis lyrata subsp. lyrata] gi|297310659|gb|EFH41083.1| hypothetical protein ARALYDRAFT_496474 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|225457114|ref|XP_002283469.1| PREDICTED: nucleobase-ascorbate transporter 6 [Vitis vinifera] gi|297733828|emb|CBI15075.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449440700|ref|XP_004138122.1| PREDICTED: nucleobase-ascorbate transporter 6-like [Cucumis sativus] gi|449477394|ref|XP_004155010.1| PREDICTED: nucleobase-ascorbate transporter 6-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 314 | ||||||
| TAIR|locus:2170783 | 532 | AT5G62890 [Arabidopsis thalian | 0.952 | 0.562 | 0.814 | 4.8e-133 | |
| TAIR|locus:2158829 | 528 | AT5G49990 [Arabidopsis thalian | 0.939 | 0.558 | 0.754 | 1.7e-121 | |
| TAIR|locus:2202700 | 538 | NAT7 "nucleobase-ascorbate tra | 0.945 | 0.552 | 0.716 | 2.4e-115 | |
| TAIR|locus:2194631 | 539 | NAT8 "nucleobase-ascorbate tra | 0.933 | 0.543 | 0.627 | 1.3e-100 | |
| TAIR|locus:2031085 | 526 | AT1G49960 [Arabidopsis thalian | 0.936 | 0.558 | 0.549 | 9.6e-89 | |
| TAIR|locus:2034104 | 541 | AT1G65550 [Arabidopsis thalian | 0.942 | 0.547 | 0.519 | 1.1e-85 | |
| TAIR|locus:2040874 | 524 | AT2G34190 [Arabidopsis thalian | 0.920 | 0.551 | 0.537 | 9.4e-82 | |
| TAIR|locus:2060076 | 520 | AT2G05760 [Arabidopsis thalian | 0.914 | 0.551 | 0.508 | 6.3e-76 | |
| TAIR|locus:2066190 | 551 | PDE135 "pigment defective embr | 0.904 | 0.515 | 0.470 | 8.9e-70 | |
| TAIR|locus:2145507 | 419 | AT5G25420 [Arabidopsis thalian | 0.589 | 0.441 | 0.548 | 1.2e-67 |
| TAIR|locus:2170783 AT5G62890 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1304 (464.1 bits), Expect = 4.8e-133, P = 4.8e-133
Identities = 246/302 (81%), Positives = 272/302 (90%)
Query: 1 MAGGAAP--KADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTS 58
MAGG AP KADEP PHP KDQLP+ISYCITSPPPWPEAILLGFQHY+VMLGTTVLIPT+
Sbjct: 1 MAGGGAPAPKADEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTA 60
Query: 59 LVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRF 118
LVPQMGGG EEKAKVIQT+LFVAG+NTLLQ+LFGTRLPAV+G SYTFVP+TISIIL+GRF
Sbjct: 61 LVPQMGGGYEEKAKVIQTILFVAGINTLLQTLFGTRLPAVVGASYTFVPTTISIILSGRF 120
Query: 119 SNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFG 178
S+ S +P+++F+R MRA QG+LIVASTLQ++LGFSGLWRNV RF GFG
Sbjct: 121 SDTS-NPIDRFERIMRATQGALIVASTLQMILGFSGLWRNVVRFLSPISAVPLVGLVGFG 179
Query: 179 LYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLL 238
LYEFGFPGVAKC+EIGLP+L+I+VF+SQYLPHVIK GKN+FDRFAVIF+VVIVWIYAHLL
Sbjct: 180 LYEFGFPGVAKCIEIGLPELLILVFVSQYLPHVIKSGKNVFDRFAVIFAVVIVWIYAHLL 239
Query: 239 TVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL 298
TVGGAYN AAP TQ SCRTDRAG+I AAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL
Sbjct: 240 TVGGAYNGAAPTTQTSCRTDRAGIIGAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL 299
Query: 299 VE 300
VE
Sbjct: 300 VE 301
|
|
| TAIR|locus:2158829 AT5G49990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2202700 NAT7 "nucleobase-ascorbate transporter 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2194631 NAT8 "nucleobase-ascorbate transporter 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2031085 AT1G49960 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2034104 AT1G65550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2040874 AT2G34190 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2060076 AT2G05760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2066190 PDE135 "pigment defective embryo 135" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2145507 AT5G25420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 314 | |||
| COG2233 | 451 | COG2233, UraA, Xanthine/uracil permeases [Nucleoti | 4e-23 | |
| pfam00860 | 389 | pfam00860, Xan_ur_permease, Permease family | 2e-21 | |
| TIGR03173 | 406 | TIGR03173, pbuX, xanthine permease | 1e-18 | |
| TIGR00801 | 412 | TIGR00801, ncs2, uracil-xanthine permease | 8e-13 | |
| PRK11412 | 433 | PRK11412, PRK11412, putative uracil/xanthine trans | 1e-05 |
| >gnl|CDD|225142 COG2233, UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Score = 98.5 bits (246), Expect = 4e-23
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 31 PPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL 90
P + +LLG QH + M G TVL+P + +G E+ A +I L +G+ TLLQ L
Sbjct: 12 RLPLGKLLLLGLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLL 71
Query: 91 ----FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTL 146
G+ LP+ +G S+ FV I+I + A+ G +I A +
Sbjct: 72 GTGPGGSGLPSYLGSSFAFVAPMIAIGGT-------------TGDGIAALLGGIIAAGLV 118
Query: 147 QIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGL------YEFGFPGVAKCVEIGLPQ--- 197
++ R + R P+ P++ ++G L G PG A + G +
Sbjct: 119 YFLISPIVKIR-LARLFPPVVTGPVVLVIGLSLAPVAINMAGGGPGAAGNPDFGSLENLG 177
Query: 198 -----LVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQ 252
L+II+ I+++ GK R ++ +V+ ++ A + D +
Sbjct: 178 LALVTLLIILLINRF-------GKGFLRRIPILIGLVVGYLLALFM----GMVDFSG--- 223
Query: 253 ASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVE 300
+ APW +P PF +G +FD G M+ + V +VE
Sbjct: 224 ----------VAEAPWFALPTPFYFG-MAFDWGAILTMLPVAIVTIVE 260
|
Length = 451 |
| >gnl|CDD|216158 pfam00860, Xan_ur_permease, Permease family | Back alignment and domain information |
|---|
| >gnl|CDD|234136 TIGR03173, pbuX, xanthine permease | Back alignment and domain information |
|---|
| >gnl|CDD|233133 TIGR00801, ncs2, uracil-xanthine permease | Back alignment and domain information |
|---|
| >gnl|CDD|183124 PRK11412, PRK11412, putative uracil/xanthine transporter; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 314 | |||
| KOG1292 | 510 | consensus Xanthine/uracil transporters [Nucleotide | 100.0 | |
| COG2233 | 451 | UraA Xanthine/uracil permeases [Nucleotide transpo | 100.0 | |
| PRK11412 | 433 | putative uracil/xanthine transporter; Provisional | 100.0 | |
| TIGR03616 | 429 | RutG pyrimidine utilization transport protein G. T | 100.0 | |
| PRK10720 | 428 | uracil transporter; Provisional | 100.0 | |
| TIGR00801 | 415 | ncs2 uracil-xanthine permease. NCS2 family appears | 100.0 | |
| PF00860 | 389 | Xan_ur_permease: Permease family; InterPro: IPR006 | 100.0 | |
| TIGR03173 | 406 | pbuX xanthine permease. All the seed members of th | 100.0 | |
| TIGR00843 | 395 | benE benzoate transporter. The benzoate transporte | 99.92 | |
| PF03594 | 378 | BenE: Benzoate membrane transport protein; InterPr | 99.89 | |
| COG3135 | 402 | BenE Uncharacterized protein involved in benzoate | 99.86 | |
| COG2252 | 436 | Xanthine/uracil/vitamin C permease [Nucleotide tra | 98.11 | |
| COG0659 | 554 | SUL1 Sulfate permease and related transporters (MF | 98.06 | |
| PRK11660 | 568 | putative transporter; Provisional | 97.48 | |
| TIGR00815 | 563 | sulP high affinity sulphate transporter 1. (2) SO4 | 97.25 | |
| PF11840 | 492 | DUF3360: Protein of unknown function (DUF3360); In | 94.57 | |
| KOG0236 | 665 | consensus Sulfate/bicarbonate/oxalate exchanger SA | 93.84 | |
| KOG1172 | 876 | consensus Na+-independent Cl/HCO3 exchanger AE1 an | 84.56 | |
| TIGR00834 | 900 | ae anion exchange protein. They preferentially cat | 83.72 |
| >KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-57 Score=438.50 Aligned_cols=284 Identities=55% Similarity=1.012 Sum_probs=267.5
Q ss_pred cccccCCCCChHHHHHHHHHHHHHHhhhhchHHHHhhhcCCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCccceeeccc
Q 021334 24 ISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEK-AKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGS 102 (314)
Q Consensus 24 ~~y~~~d~pp~~~~~~lGlQhvl~m~~~~v~vPliia~a~gl~~~~~-~~lI~~~l~~sGi~TllQ~~~G~rlPiv~G~S 102 (314)
+.|++||.|||.+++++|+||++.|+++++++|.++++++|.+++|. +++||+.+|++||.|++|+++|.|||++||+|
T Consensus 1 l~y~i~d~P~w~~~i~lgfQhyl~~lg~~v~iP~~lv~~m~~g~~~~~~~lIsT~~f~sGI~TllQt~fG~RLp~v~G~S 80 (510)
T KOG1292|consen 1 LHYCINDNPPWPEIILLGFQHYLVCLGTTVLIPFLLVPLMCGGDEEKAVQLISTIFFVSGITTLLQTTFGTRLPLVQGPS 80 (510)
T ss_pred CccCCCCCCCchHHHHhccchHHHHhhhhhhhhhhhcccccCChHHHHHHHHHHHhhhccHHHHHHHHhhcccccccccc
Confidence 47999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred cchHHHHHHHHhhcccCCCC---CCCchhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhcCchhHHHHHHHhhccc
Q 021334 103 YTFVPSTISIILAGRFSNYS---GDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGL 179 (314)
Q Consensus 103 fa~l~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~v~Ga~ivagl~~~llg~tg~~~~l~~~fpP~V~g~vv~lIGlsL 179 (314)
|+|++|+.++.+.+++.|+. +.+.+.|++.++++|||+++++++++++|++|+++++.|++.|+++.|+++++|+++
T Consensus 81 fafl~p~~~i~~~~~~~~~~~~~~~~~~~~~~~mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l 160 (510)
T KOG1292|consen 81 FAFLPPALAIISLPRFTCITTPHETDTERFQHRMREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALVGLGL 160 (510)
T ss_pred eehhhHHHHHHhccccCCCCCcccchhHHHHHHHHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhh
Confidence 99999999999988888853 223457999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccccchhhHHHHHHHHHHHHHH--hchhh--hccccchhhHHHHHHHHHHHHHHHHhhhcCCCCCCCccCcccc
Q 021334 180 YEFGFPGVAKCVEIGLPQLVIIVFISQY--LPHVI--KRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASC 255 (314)
Q Consensus 180 ~~~~~~~~~~~~~i~~~~l~~iv~~s~~--~~~~~--~~~~~~~~~~svLigi~vG~~va~~~g~~g~~~~~~~~~~~~~ 255 (314)
++.+.+.++.||+++++.+++++++++| +++.. ..+++++++|++++++.+.|++|++++..|+||.+++.++++|
T Consensus 161 ~~~~~~~~~~~weI~l~~~llli~fsqy~~~~~~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~~~~t~~~~ 240 (510)
T KOG1292|consen 161 FQDGFPKLGKHWEISLPEILLLILFSQYASLPKKGFGSRRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYKPTTTQSSC 240 (510)
T ss_pred HHhhhhhhhhheeecHHHHHHHHHHHHhhhcccccccccccchHhhccHHHHHHHHHHHHHHHHhccccCCCccccCCcc
Confidence 9999999999999999999999999999 53322 2346799999999999999999999999999999999999999
Q ss_pred ccCccCcCCCCCccccCCCCCcccCcccHHHHHHHHHHHHHHHhhhhhhHHH
Q 021334 256 RTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVEVCFFSSF 307 (314)
Q Consensus 256 ~~d~s~~v~~apwf~~P~p~~fg~P~F~~~ail~~~~~~lv~~~Es~G~~~~ 307 (314)
|+|.+.+++++||+++|||+|||.|+||.+..+.|+...+++++||+|+...
T Consensus 241 RTD~~~vi~~apWi~vPyP~QwG~P~f~~~~~f~m~aa~~va~iES~G~y~a 292 (510)
T KOG1292|consen 241 RTDRNGVISSAPWIRVPYPFQWGPPTFSAGLVFAMMAASLVAMIESTGDYIA 292 (510)
T ss_pred cccHhhhhccCCceeecCCCccCCCcccHHHHHHHHHHHHHHHHHhcchHHH
Confidence 9999888999999999999999999999999999999999999999998653
|
|
| >COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK11412 putative uracil/xanthine transporter; Provisional | Back alignment and domain information |
|---|
| >TIGR03616 RutG pyrimidine utilization transport protein G | Back alignment and domain information |
|---|
| >PRK10720 uracil transporter; Provisional | Back alignment and domain information |
|---|
| >TIGR00801 ncs2 uracil-xanthine permease | Back alignment and domain information |
|---|
| >PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters [] | Back alignment and domain information |
|---|
| >TIGR03173 pbuX xanthine permease | Back alignment and domain information |
|---|
| >TIGR00843 benE benzoate transporter | Back alignment and domain information |
|---|
| >PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ] | Back alignment and domain information |
|---|
| >COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK11660 putative transporter; Provisional | Back alignment and domain information |
|---|
| >TIGR00815 sulP high affinity sulphate transporter 1 | Back alignment and domain information |
|---|
| >PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised | Back alignment and domain information |
|---|
| >KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00834 ae anion exchange protein | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 314 | |||
| 3qe7_A | 429 | Uracil permease; uracil transporter, URAA, transpo | 7e-19 |
| >3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Length = 429 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 7e-19
Identities = 50/289 (17%), Positives = 94/289 (32%), Gaps = 79/289 (27%)
Query: 32 PPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL- 90
PP + I L QH M G TV LVP + N T+L G+ TLL
Sbjct: 12 PPLLQTIPLSLQHLFAMFGATV-----LVPVLFHIN------PATVLLFNGIGTLLYLFI 60
Query: 91 FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVL 150
++PA +G S+ F+ + ++ G G I+ L ++
Sbjct: 61 CKGKIPAYLGSSFAFISPVLLLLPLG----------------YEVALGGFIMCGVLFCLV 104
Query: 151 GF---SGLWRNVTRFLSPLSVVPLISLVGFGL-----------YEFGFPGVAKCVEIGLP 196
F + P ++ +++++G L G +K + I +
Sbjct: 105 SFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISIT 164
Query: 197 QLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCR 256
L + V S + ++ V++ + + +
Sbjct: 165 TLAVTVLGSVL-------FRGFLAIIPILIGVLVGYALSFAM------------------ 199
Query: 257 TDRAGLID-----AAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVE 300
G++D A W +P + P F+ ++ A+ V + E
Sbjct: 200 ----GIVDTTPIINAHWFALPTLY---TPRFEWFAILTILPAALVVIAE 241
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 314 | |||
| 3qe7_A | 429 | Uracil permease; uracil transporter, URAA, transpo | 100.0 |
| >3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-40 Score=323.42 Aligned_cols=231 Identities=20% Similarity=0.361 Sum_probs=203.3
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHHhhhhchHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHh-CCccceeecc
Q 021334 23 SISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLF-GTRLPAVMGG 101 (314)
Q Consensus 23 ~~~y~~~d~pp~~~~~~lGlQhvl~m~~~~v~vPliia~a~gl~~~~~~~lI~~~l~~sGi~TllQ~~~-G~rlPiv~G~ 101 (314)
+..|++|||||+.+.+.+|+||+++|+++++++|+++ |+|+ +++++++|++|++|+++ |+|+|+++|+
T Consensus 3 ~~~~~~~~~~~~~~~i~~GlQh~lam~~~~v~~Plil----Gl~~-------~~~l~~agi~Tllq~~~~~~~lP~~~G~ 71 (429)
T 3qe7_A 3 RRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLF----HINP-------ATVLLFNGIGTLLYLFICKGKIPAYLGS 71 (429)
T ss_dssp -CCBCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT----TSCH-------HHHHHHHHHHHHHHHHHTTTCCCCCEEE
T ss_pred CcccCcccCCCHHHHHHHHHHHHHHHHHHHHHhHHHh----CCCH-------HHHHHHHHHHHHHHHHHcCCCCCeEecC
Confidence 5679999999999999999999999999999999987 8887 48999999999999985 8999999999
Q ss_pred ccchHHHHHHHHhhcccCCCCCCCchhhhchHHHHHHHHHHHHHHHHHHHhh--hh-HHHHHhhcCchhHHHHHHHhhcc
Q 021334 102 SYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFS--GL-WRNVTRFLSPLSVVPLISLVGFG 178 (314)
Q Consensus 102 Sfa~l~~~~~i~~~~~~~~~~~~~~~~~~~~l~~v~Ga~ivagl~~~llg~t--g~-~~~l~~~fpP~V~g~vv~lIGls 178 (314)
||+|++++.++.. +++++++|+.+++|++++++|++ +. .+|++|+|||+|+|+++++||++
T Consensus 72 sfafi~~~~~i~~----------------~g~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl~ 135 (429)
T 3qe7_A 72 SFAFISPVLLLLP----------------LGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLE 135 (429)
T ss_dssp CGGGHHHHHHHGG----------------GCHHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHh----------------cCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHHH
Confidence 9999999887753 25899999999999999999985 22 15899999999999999999999
Q ss_pred chhccccccc-----------cchhhHHHHHHHHHHHHHHhchhhhccccchhhHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 021334 179 LYEFGFPGVA-----------KCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDA 247 (314)
Q Consensus 179 L~~~~~~~~~-----------~~~~i~~~~l~~iv~~s~~~~~~~~~~~~~~~~~svLigi~vG~~va~~~g~~g~~~~~ 247 (314)
+++.++++.+ .++.+++.+++++++++++.| +++|++++|+|+++||++|+.+|.
T Consensus 136 l~~~~~~~~~~~~~~~~~~~~~~~~la~~tl~iii~~~~~~k-------g~~~~~aiLigivvg~~~a~~~G~------- 201 (429)
T 3qe7_A 136 LAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFR-------GFLAIIPILIGVLVGYALSFAMGI------- 201 (429)
T ss_dssp HHHHHHHHHTSSCBTTBCCCHHHHHHHHHHHHHHHHHHHSSS-------TTTTTHHHHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHhccccCCCCccccHHHHHHHHHHHHHHHHHHHHhc-------ccchhhHHHHHHHHHHHHHHHhcC-------
Confidence 9999876543 256788888888888887764 568999999999999999999986
Q ss_pred CccCccccccCccCcCCCCCccccCCCCCcccCcccHHHHHHHHHHHHHHHhhhhhhHHH
Q 021334 248 APKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVEVCFFSSF 307 (314)
Q Consensus 248 ~~~~~~~~~~d~s~~v~~apwf~~P~p~~fg~P~F~~~ail~~~~~~lv~~~Es~G~~~~ 307 (314)
+|+++ +.++||+++|+ |+.|+||+++++.++++++++++|++||..-
T Consensus 202 ---------~d~~~-v~~a~~~~lP~---~~~P~f~~~~i~~i~~i~lV~~~Eslg~~~a 248 (429)
T 3qe7_A 202 ---------VDTTP-IINAHWFALPT---LYTPRFEWFAILTILPAALVVIAEHVGHLVV 248 (429)
T ss_dssp ---------TTSSH-HHHSCSSCCCC---CCCCCCCHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ---------CCccc-ccccccccccC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46664 67789999996 5779999999999999999999999999853
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00