Citrus Sinensis ID: 021354

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310---
Protein Sequence
MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLGR
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHccEEEccccccHHHHHHHHcccHHHHHHHHHHHHHHccccccccccHHHHHHHHHccccEEEEEEcccEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEcccccHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEEEHHHHHHHHHHHHHHccccEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSyplatlallplplifrntttvvpsfKFSILSRIILLSFIGVLSQIFgytgiacssptlssaisnltpaFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYkgptiflgtspssthstnslhwlmgspsvsnwvtGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPlclfaepdlslwrlkpdVALVSIVYSaflgpsfntIIHTWglrlkgpvyiAIFKPLSVVIAAITGIIFLgdtlhlgr
Flexible Loop (DISEMBL)
MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLgdtlhlgr
Low Complexity Region (SEG)
MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYplatlallplplIFRNTTTVVPsfkfsilsriillsfiGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLGR
Disordered region (IsUnstruct)
*****FFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTS******TNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLH***
Disordered Region (DISOPRED)
***********LLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGT******************SVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG*
Disordered Region (DISEMBL)
MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLGR
Disordered Region (DISPRO)
***RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTS*******************SNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLGR
Transmembrane Helix (TMHMM)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHoooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	313	2.2.26 [Sep-21-2011]
Q9FL08	368	WAT1-related protein At5g	yes	no	0.980	0.834	0.559	5e-90
F4KHA8	370	WAT1-related protein At5g	no	no	0.974	0.824	0.573	1e-88
Q94JU2	367	WAT1-related protein At3g	no	no	0.964	0.822	0.493	5e-73
F4JK59	347	WAT1-related protein At4g	no	no	0.939	0.847	0.521	1e-71
Q945L4	339	WAT1-related protein At5g	no	no	0.900	0.831	0.429	1e-57
Q8VYZ7	360	WAT1-related protein At3g	no	no	0.961	0.836	0.464	2e-56
Q56X95	355	WAT1-related protein At3g	no	no	0.961	0.847	0.457	4e-56
Q9LRS5	353	WAT1-related protein At3g	no	no	0.961	0.852	0.447	2e-55
F4IYZ0	358	WAT1-related protein At3g	no	no	0.961	0.840	0.437	2e-50
F4I5D5	375	WAT1-related protein At1g	no	no	0.977	0.816	0.323	6e-39

>sp|Q9FL08|WTR42_ARATH WAT1-related protein At5g40240 OS=Arabidopsis thaliana GN=At5g40240 PE=2 SV=1

 Score =  331 bits (848), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 173/309 (55%), Positives = 227/309 (73%), Gaps = 2/309 (0%)

Query: 4   RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFR 63
           + F R+ +  +A  AVEC TVG NTLFKAA  +GLS+YVFV YSY ++TL LLPL +IF 
Sbjct: 12  KYFTRDVVPFAAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFG 71

Query: 64  NTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL 123
            +  + P+ K  +  +I LL  +G +SQI G  GIA SSPTL+SAISNLTPAFTFTLAV+
Sbjct: 72  RSRRL-PAAKSPLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVI 130

Query: 124 FRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSP 183
           FRME++ LR+ +TQAKIIG ++SISGALVVVLYKGP +    S ++   T +LH  + S 
Sbjct: 131 FRMEQVRLRSSATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSI 190

Query: 184 SVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEP 243
             S+W+ GG LLA+Q FL+S+W IL T+++ +YP E+ V F YNLFA +I+VP+CLFAE 
Sbjct: 191 E-SSWIIGGLLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAES 249

Query: 244 DLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGII 303
           +L+ W LKPD++L +I+YS      F+ + HTWGL LKGPVYI++F+PLS+ IA   G I
Sbjct: 250 NLTSWVLKPDISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAI 309

Query: 304 FLGDTLHLG 312
           FLGD LHLG
Sbjct: 310 FLGDALHLG 318

Arabidopsis thaliana (taxid: 3702)

>sp|F4KHA8|WTR41_ARATH WAT1-related protein At5g40230 OS=Arabidopsis thaliana GN=At5g40230 PE=2 SV=1

 Score =  326 bits (836), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 176/307 (57%), Positives = 226/307 (73%), Gaps = 2/307 (0%)

Query: 6   FFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNT 65
           F R+ +  +A VAVEC TVG NTLFKAA  +GLS+YVFV Y+Y +ATL LLPL LIF  +
Sbjct: 15  FCRDVVPFTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRS 74

Query: 66  TTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFR 125
             + PS K  +   I LL+ +G +S I G  GI  SSPTL+SAISNLTPAFTFTLAV+FR
Sbjct: 75  KRL-PSAKTPVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFR 133

Query: 126 MEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSV 185
           ME++ LR+ +TQAKIIGT+VSISGALVV+LYKGP +    S +    T SL+  + S   
Sbjct: 134 MEQIVLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFD- 192

Query: 186 SNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL 245
           S+W+ GG LLA Q  L+S+W IL T+++ +YP E+ V FLYNL A +I+ P+CLFAE DL
Sbjct: 193 SSWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDL 252

Query: 246 SLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFL 305
           + + LKP V+L S++YS  L  SF ++IHTWGL LKGPVYI++FKPLS+VIA   G++FL
Sbjct: 253 NSFILKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFL 312

Query: 306 GDTLHLG 312
           GD L+LG
Sbjct: 313 GDALYLG 319

Arabidopsis thaliana (taxid: 3702)

>sp|Q94JU2|WTR18_ARATH WAT1-related protein At3g28050 OS=Arabidopsis thaliana GN=At3g28050 PE=2 SV=1

 Score =  274 bits (701), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 155/314 (49%), Positives = 206/314 (65%), Gaps = 12/314 (3%)

Query: 1   MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLP-LP 59
           M R+ F RE L ++A V +EC  VGLNTLFKAA  KG+S++VF+ YSY LA L LLP L 
Sbjct: 1   MARKYFQREVLPVTALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLPSLF 60

Query: 60  LIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFT 119
             FR+ T  +P   FSIL +I+LL  IG  S I GYTGI  SSPTL+SAISNLTPAFTF 
Sbjct: 61  CSFRSRT--LPPMNFSILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFL 118

Query: 120 LAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWL 179
           LAV+FRME ++ +  S+ AK++GT+VSI GA +V LY GP +   + PS +  + S +  
Sbjct: 119 LAVVFRMESVSFKRTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAKSPPSVSLRSQSTN-- 176

Query: 180 MGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCL 239
                  NW+ G   LA + F + +W I+ TQI+  YPAE  V   Y++  +     + L
Sbjct: 177 ------PNWILGAGFLAVEYFCVPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTL 230

Query: 240 FAE-PDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAA 298
           F E  DL  W++KP++ALVSIV S   G   N  IHTW LR+KGP+++A+FKPLS+ IA 
Sbjct: 231 FTEGNDLGAWKIKPNIALVSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAV 290

Query: 299 ITGIIFLGDTLHLG 312
             G+IFL D+L++G
Sbjct: 291 AMGVIFLRDSLYIG 304

Arabidopsis thaliana (taxid: 3702)

>sp|F4JK59|WTR33_ARATH WAT1-related protein At4g15540 OS=Arabidopsis thaliana GN=At4g15540 PE=2 SV=1

 Score =  270 bits (689), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 161/309 (52%), Positives = 212/309 (68%), Gaps = 15/309 (4%)

Query: 4   RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFR 63
           + F R+ +  +A +A+ECTTVG + L+KAA  +G S+YVFV Y+Y  ATL LL L LIF 
Sbjct: 9   KYFKRDVVPFTAMIAIECTTVGSSILYKAATLRGFSFYVFVFYAYVGATLVLLLLSLIFG 68

Query: 64  NTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL 123
            + ++ P+ K S+  +I LL+ +G+ S++ G  GI  SSPTLSSAISNLTPAFTF LA+ 
Sbjct: 69  RSRSL-PTAKSSLFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIF 127

Query: 124 FRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSP 183
           FRME++ LR+ +TQAKIIGT+VSISGALV+VLYKGP + +  S +S  S           
Sbjct: 128 FRMEQVMLRSSATQAKIIGTIVSISGALVIVLYKGPKLLVAASFTSFES----------- 176

Query: 184 SVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEP 243
              +W+ GG LL  Q  LLS+W IL T I+ IYP E+ V F YNL A +I+  +CL  E 
Sbjct: 177 ---SWIIGGLLLGLQFLLLSVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEK 233

Query: 244 DLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGII 303
           DL+ W+LKP  +L S++YS     S  ++IHTWGL +KGPVYI++FKPLS+ IA     I
Sbjct: 234 DLNSWQLKPGFSLASVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAI 293

Query: 304 FLGDTLHLG 312
           FLGDTLHLG
Sbjct: 294 FLGDTLHLG 302

Arabidopsis thaliana (taxid: 3702)

>sp|Q945L4|WTR40_ARATH WAT1-related protein At5g40210 OS=Arabidopsis thaliana GN=At5g40210 PE=2 SV=1

 Score =  223 bits (569), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/307 (42%), Positives = 193/307 (62%), Gaps = 25/307 (8%)

Query: 8   REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLI-FRNTT 66
           R+  +L+A V  E + VG+NTL KAA SKGLS +V + YSY   +L LLPL    FR+ +
Sbjct: 9   RDGWILTAMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLTFFSFRSRS 68

Query: 67  TVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRM 126
             +P   FSIL  + +L  I    QI GY GI  SSPTLSSA+SN+ PAFTF LAV+FRM
Sbjct: 69  --LPPLTFSILCNMGILGLIASAFQILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRM 126

Query: 127 EKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVS 186
           E ++L   S+ AK++GT++SI GALVV LY GP +       S+H              S
Sbjct: 127 ENISLGKKSSVAKVLGTILSIIGALVVTLYHGPMLM------SSH--------------S 166

Query: 187 NWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL- 245
           +W+ GG LLA Q  L+S+  +++   +  YP+ ++V  ++N+  AV+   + L AE D  
Sbjct: 167 DWIIGGGLLALQYILVSVSYLVMAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNP 226

Query: 246 SLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFL 305
             W ++ D+ L+++V +  L   +  +IHTW +  KGPVY+++FKPLS++IAA++  IFL
Sbjct: 227 KAWVIRFDITLITVVATGILNSGY-YVIHTWAVSHKGPVYLSMFKPLSILIAAVSTFIFL 285

Query: 306 GDTLHLG 312
           G++L+LG
Sbjct: 286 GESLYLG 292

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYZ7|WTR20_ARATH WAT1-related protein At3g28070 OS=Arabidopsis thaliana GN=At3g28070 PE=2 SV=1

 Score =  219 bits (558), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/306 (46%), Positives = 205/306 (66%), Gaps = 5/306 (1%)

Query: 8   REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTT 67
           REA+ L+A + VE + VG++TLFK A SKGL+ Y F+ YSY LA+L LLP  L F N ++
Sbjct: 13  REAVFLTAMLVVETSVVGISTLFKFATSKGLNIYPFLGYSYLLASLLLLPS-LFFTNRSS 71

Query: 68  VVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
            +P    SILS+I LL F+G +  I GY GI  SSPTL+SAI+N+TPA TF LA++FRME
Sbjct: 72  SLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFILAIIFRME 131

Query: 128 KLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSN 187
           K++ +  S+ AK++GT++S+ GALVV+ Y GP +FL +SP   +       L  S S S+
Sbjct: 132 KVSFKERSSLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPL--SSSNSD 189

Query: 188 WVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL-S 246
           W+ GG LL  Q   +S+  IL   I+++YPA   V+FLY +  +++   + L  E +  S
Sbjct: 190 WLIGGALLTMQGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVVEKNNPS 249

Query: 247 LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLG 306
           +W +  D+ L++IV  A +  S   +IH+W +R KGP+Y+AIFKPLS++IA + G IFL 
Sbjct: 250 VWIIHFDITLITIVTMAIV-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLN 308

Query: 307 DTLHLG 312
           D+L+LG
Sbjct: 309 DSLYLG 314

Arabidopsis thaliana (taxid: 3702)

>sp|Q56X95|WTR23_ARATH WAT1-related protein At3g28130 OS=Arabidopsis thaliana GN=At3g28130 PE=2 SV=1

 Score =  218 bits (555), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 140/306 (45%), Positives = 195/306 (63%), Gaps = 5/306 (1%)

Query: 8   REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTT 67
           R+A+LL+A +A E   V +NTLFKAA SKGL+ Y F+ YSY + ++ LLP   IF   + 
Sbjct: 9   RDAVLLTAMLATETGNVAMNTLFKAATSKGLNSYTFLIYSYLIGSIVLLP-SHIFSYRSR 67

Query: 68  VVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
            +PS   SIL +I +L  +G    I G+ GI  S+PTL+SAISN+ PA TF LA++FRME
Sbjct: 68  SLPSLSLSILCKIGVLGLLGSTYLITGFIGIEYSNPTLASAISNINPAITFILAIIFRME 127

Query: 128 KLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSN 187
           K + +  S+ AK++GT+VS+ GALVVVLY GP +F  +SP        L  L  S S S+
Sbjct: 128 KASFKEKSSVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPPFPQLRQLL--LPLSSSNSD 185

Query: 188 WVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL-S 246
           W+ GG LLA +  L+ +  IL   I+ +YPA   V+F Y L A+++   + + AE +  S
Sbjct: 186 WIIGGCLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNNPS 245

Query: 247 LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLG 306
           +W +  D+ LV IV      P +   IH W +R KGPVY+AIF+PLS++IA I G IFLG
Sbjct: 246 IWIIHFDITLVCIVVGGIFNPGYYA-IHLWAVRNKGPVYLAIFRPLSILIAVIMGAIFLG 304

Query: 307 DTLHLG 312
           D+ +LG
Sbjct: 305 DSFYLG 310

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LRS5|WTR22_ARATH WAT1-related protein At3g28100 OS=Arabidopsis thaliana GN=At3g28100 PE=2 SV=1

 Score =  216 bits (550), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/306 (44%), Positives = 201/306 (65%), Gaps = 5/306 (1%)

Query: 8   REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTT 67
           REA+ L+A +A E   VG++TLFK A SKGL+ Y F+ YSY LA+L LLP    F + + 
Sbjct: 10  REAVFLTAMLATETGVVGISTLFKVATSKGLNLYAFLGYSYLLASLLLLPSLF-FTDRSR 68

Query: 68  VVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
            +P    SILS+I LL  +G +  I GY GI  SSPTL+SAISN+TPA TF LA++FRME
Sbjct: 69  SLPPLSLSILSKIGLLGLLGSMYVITGYIGIEYSSPTLASAISNITPALTFILAIIFRME 128

Query: 128 KLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSN 187
           K++ +  S+ AK++GT++S+ GALVVVLY GP +F+ +SP   +          S S S+
Sbjct: 129 KVSFKERSSVAKVMGTILSLIGALVVVLYHGPRVFVASSPPYINFRQLS--PPLSSSNSD 186

Query: 188 WVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL-S 246
           W+ GG LL  +   +S+  IL  +I++ YPA   V+FLY +  +++   + L  E +  S
Sbjct: 187 WLIGGALLTIRDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNPS 246

Query: 247 LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLG 306
           +W ++ D+ L++IV  A +  S   +IH+W +R KGP+Y+AIFKPLS++IA +   +FL 
Sbjct: 247 VWIIRFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFLN 305

Query: 307 DTLHLG 312
           D+L+LG
Sbjct: 306 DSLYLG 311

Arabidopsis thaliana (taxid: 3702)

>sp|F4IYZ0|WTR21_ARATH WAT1-related protein At3g28080 OS=Arabidopsis thaliana GN=At3g28080 PE=2 SV=1

 Score =  199 bits (507), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/306 (43%), Positives = 194/306 (63%), Gaps = 5/306 (1%)

Query: 8   REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTT 67
           REA+ L+A +A E + VGL+TLFK A SKGL+ Y F++YSY LA+L LLP    F N + 
Sbjct: 10  REAVFLTAMLAGETSIVGLSTLFKVATSKGLNIYPFLSYSYLLASLLLLPSLF-FTNRSR 68

Query: 68  VVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
            +P    SILS+I LL F+G +  I G  GI  S+PTL+SAI N+ PA TF LAV+FRME
Sbjct: 69  SLPPLSASILSKIGLLGFLGSMYVITGGIGIEYSNPTLASAIGNIVPALTFILAVIFRME 128

Query: 128 KLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSN 187
           K++ +  S+ AK++GT++S+ GA VV+ Y GP +F+ +SP   +          S S S+
Sbjct: 129 KVSFKERSSVAKVMGTILSLIGAFVVIFYHGPRVFVASSPPYLNFRQLS--PPLSSSKSD 186

Query: 188 WVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL-S 246
           W+ GG +L  Q   +S+  IL T I+  YP    V+ LY L  +++   + L  E +  S
Sbjct: 187 WLIGGAILTIQGIFVSVSFILQTHIMREYPEAFTVSILYILCISIVTSMIGLVVEKNNPS 246

Query: 247 LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLG 306
           +W +  D+ L +IV +  +  S   +IH+W +R K P+Y+AIFKPLS++IA + G IFL 
Sbjct: 247 IWIIHFDITLFTIVTTGII-TSVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTIFLN 305

Query: 307 DTLHLG 312
           D+L+LG
Sbjct: 306 DSLYLG 311

Arabidopsis thaliana (taxid: 3702)

>sp|F4I5D5|WTR11_ARATH WAT1-related protein At1g70260 OS=Arabidopsis thaliana GN=At1g70260 PE=2 SV=1

 Score =  161 bits (407), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 166/321 (51%), Gaps = 15/321 (4%)

Query: 1   MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPL 60
           ME +    E +   A   +E  T+ L  + K A + G+S +VFV Y+    ++ LLP   
Sbjct: 1   MEVKVRRDELVPFVAMAIMEACTIALTIMAKTALTGGMSPFVFVVYTNAFGSILLLPFSF 60

Query: 61  IF-RNTTTVVPSFKFSILSRIILLSFIGV-LSQIFGYTGIACSSPTLSSAISNLTPAFTF 118
           +F RN  T    F + +L R+  L F G+ + Q   + G+  SSP +  A+    P+F+F
Sbjct: 61  LFHRNERTEQSIFSWPLLVRVFFLGFTGIFMFQNLAFVGLRFSSPIVVCAMGLQIPSFSF 120

Query: 119 TLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHW 178
            L+++    KL  R  ST+AK++GT+VS+SGA V  LYKGP I     P+S+ S N   +
Sbjct: 121 LLSIILGRSKLDWRNTSTRAKLMGTIVSLSGAFVEELYKGPFI----RPASSASPN--RF 174

Query: 179 LMGSPSV-------SNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAA 231
           L   P +        NW  G   LA   F +S+++++ T  +  YP  + VA  Y++   
Sbjct: 175 LKSVPKLLVYYNLPDNWFLGCIFLAVAVFSVSLFNVVQTGTVKKYPHVMKVASFYSIVGT 234

Query: 232 VIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKP 291
           +  +   LF E DLS W+++P+  L  I+ +   G    T +H    ++KGP Y+ +FKP
Sbjct: 235 IQCLLFSLFMERDLSAWKIQPNFDLYLIIATGTFGSVIRTSVHVKCTQMKGPYYVPLFKP 294

Query: 292 LSVVIAAITGIIFLGDTLHLG 312
             +  A + G  F  ++LH G
Sbjct: 295 FGIFWATLFGTSFFVNSLHYG 315

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	313
42568214	368	nodulin MtN21 /EamA-like transporter fam	0.980	0.834	0.559	3e-88
334188088	382	nodulin MtN21 /EamA-like transporter fam	0.980	0.803	0.559	4e-88
15242612	370	nodulin MtN21 /EamA-like transporter fam	0.974	0.824	0.573	7e-87
297801562	367	hypothetical protein ARALYDRAFT_330483 [	0.971	0.828	0.575	1e-85
10177510	346	nodulin-like protein [Arabidopsis thalia	0.939	0.849	0.584	2e-85
297801560	368	nodulin MtN21 family protein [Arabidopsi	0.980	0.834	0.559	7e-85
225452524	359	PREDICTED: auxin-induced protein 5NG4 [V	0.984	0.857	0.532	7e-82
296087698	344	unnamed protein product [Vitis vinifera]	0.932	0.848	0.554	9e-82
356524437	427	PREDICTED: auxin-induced protein 5NG4-li	0.977	0.716	0.524	2e-81
449449196	377	PREDICTED: auxin-induced protein 5NG4-li	0.968	0.803	0.523	1e-80

>gi|42568214|ref|NP_198840.2| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|10177511|dbj|BAB10905.1| nodulin-like protein [Arabidopsis thaliana] gi|30725298|gb|AAP37671.1| At5g40240 [Arabidopsis thaliana] gi|110743630|dbj|BAE99652.1| hypothetical protein [Arabidopsis thaliana] gi|332007140|gb|AED94523.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 173/309 (55%), Positives = 227/309 (73%), Gaps = 2/309 (0%)

Query: 4   RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFR 63
           + F R+ +  +A  AVEC TVG NTLFKAA  +GLS+YVFV YSY ++TL LLPL +IF 
Sbjct: 12  KYFTRDVVPFAAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFG 71

Query: 64  NTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL 123
            +  + P+ K  +  +I LL  +G +SQI G  GIA SSPTL+SAISNLTPAFTFTLAV+
Sbjct: 72  RSRRL-PAAKSPLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVI 130

Query: 124 FRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSP 183
           FRME++ LR+ +TQAKIIG ++SISGALVVVLYKGP +    S ++   T +LH  + S 
Sbjct: 131 FRMEQVRLRSSATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSI 190

Query: 184 SVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEP 243
             S+W+ GG LLA+Q FL+S+W IL T+++ +YP E+ V F YNLFA +I+VP+CLFAE 
Sbjct: 191 E-SSWIIGGLLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAES 249

Query: 244 DLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGII 303
           +L+ W LKPD++L +I+YS      F+ + HTWGL LKGPVYI++F+PLS+ IA   G I
Sbjct: 250 NLTSWVLKPDISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAI 309

Query: 304 FLGDTLHLG 312
           FLGD LHLG
Sbjct: 310 FLGDALHLG 318

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334188088|ref|NP_001190441.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|332007141|gb|AED94524.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  330 bits (847), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 173/309 (55%), Positives = 227/309 (73%), Gaps = 2/309 (0%)

Query: 4   RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFR 63
           + F R+ +  +A  AVEC TVG NTLFKAA  +GLS+YVFV YSY ++TL LLPL +IF 
Sbjct: 26  KYFTRDVVPFAAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFG 85

Query: 64  NTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL 123
            +  + P+ K  +  +I LL  +G +SQI G  GIA SSPTL+SAISNLTPAFTFTLAV+
Sbjct: 86  RSRRL-PAAKSPLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVI 144

Query: 124 FRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSP 183
           FRME++ LR+ +TQAKIIG ++SISGALVVVLYKGP +    S ++   T +LH  + S 
Sbjct: 145 FRMEQVRLRSSATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSI 204

Query: 184 SVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEP 243
             S+W+ GG LLA+Q FL+S+W IL T+++ +YP E+ V F YNLFA +I+VP+CLFAE 
Sbjct: 205 E-SSWIIGGLLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAES 263

Query: 244 DLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGII 303
           +L+ W LKPD++L +I+YS      F+ + HTWGL LKGPVYI++F+PLS+ IA   G I
Sbjct: 264 NLTSWVLKPDISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAI 323

Query: 304 FLGDTLHLG 312
           FLGD LHLG
Sbjct: 324 FLGDALHLG 332

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242612|ref|NP_198839.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|332007139|gb|AED94522.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  326 bits (836), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 176/307 (57%), Positives = 226/307 (73%), Gaps = 2/307 (0%)

Query: 6   FFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNT 65
           F R+ +  +A VAVEC TVG NTLFKAA  +GLS+YVFV Y+Y +ATL LLPL LIF  +
Sbjct: 15  FCRDVVPFTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRS 74

Query: 66  TTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFR 125
             + PS K  +   I LL+ +G +S I G  GI  SSPTL+SAISNLTPAFTFTLAV+FR
Sbjct: 75  KRL-PSAKTPVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFR 133

Query: 126 MEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSV 185
           ME++ LR+ +TQAKIIGT+VSISGALVV+LYKGP +    S +    T SL+  + S   
Sbjct: 134 MEQIVLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFD- 192

Query: 186 SNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL 245
           S+W+ GG LLA Q  L+S+W IL T+++ +YP E+ V FLYNL A +I+ P+CLFAE DL
Sbjct: 193 SSWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDL 252

Query: 246 SLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFL 305
           + + LKP V+L S++YS  L  SF ++IHTWGL LKGPVYI++FKPLS+VIA   G++FL
Sbjct: 253 NSFILKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFL 312

Query: 306 GDTLHLG 312
           GD L+LG
Sbjct: 313 GDALYLG 319

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801562|ref|XP_002868665.1| hypothetical protein ARALYDRAFT_330483 [Arabidopsis lyrata subsp. lyrata] gi|297314501|gb|EFH44924.1| hypothetical protein ARALYDRAFT_330483 [Arabidopsis lyrata subsp. lyrata]

 Score =  322 bits (826), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 176/306 (57%), Positives = 224/306 (73%), Gaps = 2/306 (0%)

Query: 6   FFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNT 65
           F R+ +  +A VAVEC TVG NTLFKAA  +GLS+YVFV Y+Y  ATL LLPL LIF  +
Sbjct: 15  FCRDVVPFTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVGATLVLLPLSLIFGRS 74

Query: 66  TTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFR 125
             + PS K  +   I LL+ +G +S I G  GI  SSPTL+SAISNLTPAFTFTLAV+FR
Sbjct: 75  KRL-PSAKTPVFFYIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFR 133

Query: 126 MEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSV 185
           ME++ LR+ +TQAKIIGT+VSISGALVVVLYKGP +    + +    T SL+  + S   
Sbjct: 134 MEQVVLRSSATQAKIIGTIVSISGALVVVLYKGPKVLTDATLTPPSPTISLYQHLTSFD- 192

Query: 186 SNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL 245
           S+W+ GG LLA Q  L+S+W IL T+++ +YP E+ V FLYNL A +I+ P+CLFAE DL
Sbjct: 193 SSWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDL 252

Query: 246 SLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFL 305
           + + LKP V+L S++YS  L  SF ++IHTWGL LKGPVYI++FKPLS+VIA   G+IFL
Sbjct: 253 TSFVLKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVIFL 312

Query: 306 GDTLHL 311
           GD L+L
Sbjct: 313 GDALYL 318

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10177510|dbj|BAB10904.1| nodulin-like protein [Arabidopsis thaliana]

 Score =  322 bits (824), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 173/296 (58%), Positives = 220/296 (74%), Gaps = 2/296 (0%)

Query: 17  VAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSI 76
           VAVEC TVG NTLFKAA  +GLS+YVFV Y+Y +ATL LLPL LIF  +  + PS K  +
Sbjct: 2   VAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSKRL-PSAKTPV 60

Query: 77  LSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLST 136
              I LL+ +G +S I G  GI  SSPTL+SAISNLTPAFTFTLAV+FRME++ LR+ +T
Sbjct: 61  FFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQIVLRSSAT 120

Query: 137 QAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLA 196
           QAKIIGT+VSISGALVV+LYKGP +    S +    T SL+  + S   S+W+ GG LLA
Sbjct: 121 QAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFD-SSWIIGGLLLA 179

Query: 197 AQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVAL 256
            Q  L+S+W IL T+++ +YP E+ V FLYNL A +I+ P+CLFAE DL+ + LKP V+L
Sbjct: 180 TQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILKPGVSL 239

Query: 257 VSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG 312
            S++YS  L  SF ++IHTWGL LKGPVYI++FKPLS+VIA   G++FLGD L+LG
Sbjct: 240 ASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYLG 295

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801560|ref|XP_002868664.1| nodulin MtN21 family protein [Arabidopsis lyrata subsp. lyrata] gi|297314500|gb|EFH44923.1| nodulin MtN21 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  320 bits (819), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 173/309 (55%), Positives = 224/309 (72%), Gaps = 2/309 (0%)

Query: 4   RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFR 63
           R F R+ +  +A  AVECTTVG NTLFKAA  +GLS+YVFV YSY ++TL LLPL LIF 
Sbjct: 12  RYFTRDVVPFAAMFAVECTTVGSNTLFKAATIRGLSFYVFVFYSYVVSTLLLLPLSLIFG 71

Query: 64  NTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL 123
            +  + PS K     +I LL  +G +SQI G  GI  SSPTL+SAISNLTPAFTFTLAV+
Sbjct: 72  RSRRL-PSAKSPFFFKIFLLGLVGFMSQIAGCKGIEYSSPTLASAISNLTPAFTFTLAVI 130

Query: 124 FRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSP 183
           FRME++ LR+ +TQAKIIG ++SISGALV++LYKGP +    S +    T SLH  + S 
Sbjct: 131 FRMEQVRLRSSATQAKIIGAILSISGALVILLYKGPQVLAAASFTPLSPTISLHQHLASL 190

Query: 184 SVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEP 243
             S W  GG LLA+Q FL+S+W IL T+++ +YP E+ V F YNLFA +I+VP+C+FAE 
Sbjct: 191 E-SKWTIGGLLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCIFAES 249

Query: 244 DLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGII 303
           +L+ W LKPD++L +I+YS      F+ + HTWGL +KGPVYI++F+PLS+ IA   G I
Sbjct: 250 NLTSWVLKPDISLAAIIYSGVFVSLFSALTHTWGLHMKGPVYISLFRPLSIAIAVAMGAI 309

Query: 304 FLGDTLHLG 312
           FLGD+LHLG
Sbjct: 310 FLGDSLHLG 318

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452524|ref|XP_002279776.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]

 Score =  310 bits (793), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 166/312 (53%), Positives = 215/312 (68%), Gaps = 4/312 (1%)

Query: 1   MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPL 60
           M      R+ +     V VE T V LN LFK+A S+G+S YVF+ YSY +ATL L PL  
Sbjct: 1   MGDGHCLRDMVPFLGMVTVEATNVVLNVLFKSATSRGMSVYVFIVYSYAVATLILFPLLF 60

Query: 61  IFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTL 120
           IF     ++P FKFS+L +I  L FIG L++I  Y GI  SSPTL+S I NLTPA TF L
Sbjct: 61  IFNGKRLLLPPFKFSLLCKICSLGFIGFLAEIVAYKGIDYSSPTLASVIGNLTPALTFML 120

Query: 121 AVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLM 180
           A+ FRMEKLALR+LS+ AKI GT+ SISGAL+VVLYKG  +   TS SS     SLH  +
Sbjct: 121 AIFFRMEKLALRSLSSWAKITGTIASISGALIVVLYKGLQL---TSTSSPLQFISLHQPL 177

Query: 181 GSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLF 240
            S  +  WV GG LL A+  L+SIW I+  Q++ +YP EL+V FL NL   +I+ P+CL 
Sbjct: 178 NSQQM-KWVIGGLLLVAEDLLVSIWYIVQAQVMEVYPEELVVVFLSNLCLTIISAPVCLI 236

Query: 241 AEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAIT 300
           AE +LS+WR++ D+AL +IV+SAF G +F  ++ TW +RLKGPVY+A+F PLS+VIA   
Sbjct: 237 AEKNLSVWRVELDIALAAIVFSAFWGSAFGMVVPTWVVRLKGPVYVAMFNPLSIVIATAM 296

Query: 301 GIIFLGDTLHLG 312
           G++FLGDTL+LG
Sbjct: 297 GVMFLGDTLYLG 308

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087698|emb|CBI34954.3| unnamed protein product [Vitis vinifera]

 Score =  309 bits (792), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 164/296 (55%), Positives = 211/296 (71%), Gaps = 4/296 (1%)

Query: 17  VAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSI 76
           V VE T V LN LFK+A S+G+S YVF+ YSY +ATL L PL  IF     ++P FKFS+
Sbjct: 2   VTVEATNVVLNVLFKSATSRGMSVYVFIVYSYAVATLILFPLLFIFNGKRLLLPPFKFSL 61

Query: 77  LSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLST 136
           L +I  L FIG L++I  Y GI  SSPTL+S I NLTPA TF LA+ FRMEKLALR+LS+
Sbjct: 62  LCKICSLGFIGFLAEIVAYKGIDYSSPTLASVIGNLTPALTFMLAIFFRMEKLALRSLSS 121

Query: 137 QAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLA 196
            AKI GT+ SISGAL+VVLYKG  +   TS SS     SLH  + S  +  WV GG LL 
Sbjct: 122 WAKITGTIASISGALIVVLYKGLQL---TSTSSPLQFISLHQPLNSQQM-KWVIGGLLLV 177

Query: 197 AQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVAL 256
           A+  L+SIW I+  Q++ +YP EL+V FL NL   +I+ P+CL AE +LS+WR++ D+AL
Sbjct: 178 AEDLLVSIWYIVQAQVMEVYPEELVVVFLSNLCLTIISAPVCLIAEKNLSVWRVELDIAL 237

Query: 257 VSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG 312
            +IV+SAF G +F  ++ TW +RLKGPVY+A+F PLS+VIA   G++FLGDTL+LG
Sbjct: 238 AAIVFSAFWGSAFGMVVPTWVVRLKGPVYVAMFNPLSIVIATAMGVMFLGDTLYLG 293

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524437|ref|XP_003530835.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 162/309 (52%), Positives = 217/309 (70%), Gaps = 3/309 (0%)

Query: 4   RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFR 63
           R   +E L  +A VAVECT VG+N LFKAA  KGLSYY F+AYS+ ++TL LL       
Sbjct: 65  RYCEKEVLPFTAMVAVECTNVGVNVLFKAATEKGLSYYAFIAYSFAVSTLFLLLPLPFVF 124

Query: 64  NTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL 123
             +  +P    S++ RI LL  IG+ +Q+ GY G+  +SPTL+SA+SNL PAFTF LA++
Sbjct: 125 RWSRGLPPLNLSLIFRIFLLGVIGLTAQLCGYKGLKYTSPTLASALSNLIPAFTFILAII 184

Query: 124 FRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSP 183
           FRMEK+ALR+ ST AKI+G++VSISGAL+VVLYKGP I   +SP  + +T+S    M S 
Sbjct: 185 FRMEKVALRSPSTMAKILGSLVSISGALIVVLYKGPIILSTSSPQPSPTTDSP---MDST 241

Query: 184 SVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEP 243
           S +NWV GG LLA +  L+ IW I+ T I+  YPAE +V FLYNL   +I+ P+CL  E 
Sbjct: 242 SQTNWVLGGSLLAIEFLLVPIWYIVQTNIMKQYPAEFIVVFLYNLTGTLISTPICLLLEA 301

Query: 244 DLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGII 303
           +LS W++  D+ L++I+YS F     ++++HTWGL LKGPVYI+IFKPLS+V+AA   +I
Sbjct: 302 NLSSWKINCDITLIAIIYSGFFSTGLSSLVHTWGLHLKGPVYISIFKPLSIVVAAALSVI 361

Query: 304 FLGDTLHLG 312
           FLGD L+ G
Sbjct: 362 FLGDALYFG 370

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449196|ref|XP_004142351.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 164/313 (52%), Positives = 209/313 (66%), Gaps = 10/313 (3%)

Query: 4   RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFR 63
           R      L   A +A+EC  VGLNTLFKAA + G+S++VFV YSY  A L LLP P I R
Sbjct: 6   RSLMEGVLPFPAMMAMECINVGLNTLFKAATAAGMSHHVFVVYSYSFAALLLLPSPFISR 65

Query: 64  NTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL 123
            T+T +P   FSI S+I LL  IG  SQI GYTGI  SSPTL+SAISNL PAFTF LA++
Sbjct: 66  -TSTRLPPLNFSITSKIALLGLIGSCSQIMGYTGINYSSPTLASAISNLVPAFTFILAII 124

Query: 124 FRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSP----SSTHSTNSLHWL 179
           FRMEK+ L++ S+QAK++GT++SISGA VV  YKGP I   +SP    S  H++  L   
Sbjct: 125 FRMEKVVLKSNSSQAKVMGTIISISGAFVVTFYKGPRIIFSSSPTISLSLHHNSQQL--- 181

Query: 180 MGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCL 239
             S S SNWV G  LL A+  L+ +W I+ T+I+  YP E  V F YNL  A+IA  + L
Sbjct: 182 --SSSDSNWVIGSLLLTAEYILVPLWYIVQTKIMKEYPEEATVVFFYNLTVAIIAAFVGL 239

Query: 240 FAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAI 299
             E D S W L+ + AL SI+ S   G   N  +HTW LRLKGPV++A+FKPLS+V+A +
Sbjct: 240 ILEKDPSAWILRQNTALASILCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIV 299

Query: 300 TGIIFLGDTLHLG 312
            G++FLGD+L+LG
Sbjct: 300 MGVLFLGDSLYLG 312

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	313
TAIR|locus:2173752	370	UMAMIT37 "AT5G40230" [Arabidop	0.974	0.824	0.530	3.8e-78
TAIR|locus:2130344	347	UMAMIT38 "AT4G15540" [Arabidop	0.936	0.844	0.485	3.7e-71
TAIR|locus:2091363	367	UMAMIT41 "AT3G28050" [Arabidop	0.964	0.822	0.455	1.8e-64
TAIR|locus:2091383	360	UMAMIT46 "AT3G28070" [Arabidop	0.961	0.836	0.415	2.5e-56
TAIR|locus:2091368	355	UMAMIT44 "AT3G28130" [Arabidop	0.961	0.847	0.428	1.1e-55
TAIR|locus:2091338	353	UMAMIT45 "AT3G28100" [Arabidop	0.961	0.852	0.408	7.8e-55
TAIR|locus:2173737	339	UMAMIT42 "Usually multiple aci	0.520	0.480	0.419	1.8e-52
TAIR|locus:2091393	358	UMAMIT47 "AT3G28080" [Arabidop	0.961	0.840	0.395	4e-51
TAIR|locus:2020688	375	UMAMIT36 "AT1G70260" [Arabidop	0.984	0.821	0.301	6.5e-35
TAIR|locus:2202745	374	UMAMIT35 "AT1G60050" [Arabidop	0.932	0.780	0.302	3.2e-33

TAIR|locus:2173752 UMAMIT37 "AT5G40230" [Arabidopsis thaliana (taxid:3702)]

 Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
 Identities = 163/307 (53%), Positives = 209/307 (68%)

Query:     6 FFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYXXXXXXXXXXXXIFRNT 65
             F R+ +  +A VAVEC TVG NTLFKAA  +GLS+YVFV Y+Y            IF  +
Sbjct:    15 FCRDVVPFTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRS 74

Query:    66 TTVVPXXXXXXXXXXXXXXXXGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFR 125
               + P                G +S I G  GI  SSPTL+SAISNLTPAFTFTLAV+FR
Sbjct:    75 KRL-PSAKTPVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFR 133

Query:   126 MEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSV 185
             ME++ LR+ +TQAKIIGT+VSISGALVV+LYKGP +    S +    T SL+  + S   
Sbjct:   134 MEQIVLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFD- 192

Query:   186 SNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL 245
             S+W+ GG LLA Q  L+S+W IL T+++ +YP E+ V FLYNL A +I+ P+CLFAE DL
Sbjct:   193 SSWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDL 252

Query:   246 SLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFL 305
             + + LKP V+L S++YS  L  SF ++IHTWGL LKGPVYI++FKPLS+VIA   G++FL
Sbjct:   253 NSFILKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFL 312

Query:   306 GDTLHLG 312
             GD L+LG
Sbjct:   313 GDALYLG 319

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2130344 UMAMIT38 "AT4G15540" [Arabidopsis thaliana (taxid:3702)]

 Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
 Identities = 150/309 (48%), Positives = 196/309 (63%)

Query:     5 KFF-REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYXXXXXXXXXXXXIFR 63
             K+F R+ +  +A +A+ECTTVG + L+KAA  +G S+YVFV Y+Y            IF 
Sbjct:     9 KYFKRDVVPFTAMIAIECTTVGSSILYKAATLRGFSFYVFVFYAYVGATLVLLLLSLIFG 68

Query:    64 NTTTVVPXXXXXXXXXXXXXXXXGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL 123
              + ++ P                G+ S++ G  GI  SSPTLSSAISNLTPAFTF LA+ 
Sbjct:    69 RSRSL-PTAKSSLFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIF 127

Query:   124 FRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSP 183
             FRME++ LR+ +TQAKIIGT+VSISGALV+VLYKGP + +  S +S  S+          
Sbjct:   128 FRMEQVMLRSSATQAKIIGTIVSISGALVIVLYKGPKLLVAASFTSFESS---------- 177

Query:   184 SVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEP 243
                 W+ GG LL  Q  LLS+W IL T I+ IYP E+ V F YNL A +I+  +CL  E 
Sbjct:   178 ----WIIGGLLLGLQFLLLSVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEK 233

Query:   244 DLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGII 303
             DL+ W+LKP  +L S++YS     S  ++IHTWGL +KGPVYI++FKPLS+ IA     I
Sbjct:   234 DLNSWQLKPGFSLASVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAI 293

Query:   304 FLGDTLHLG 312
             FLGDTLHLG
Sbjct:   294 FLGDTLHLG 302

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091363 UMAMIT41 "AT3G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
 Identities = 143/314 (45%), Positives = 190/314 (60%)

Query:     1 MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYXXXXXXXXXXXX 60
             M R+ F RE L ++A V +EC  VGLNTLFKAA  KG+S++VF+ YSY            
Sbjct:     1 MARKYFQREVLPVTALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLPSLF 60

Query:    61 I-FRNTTTVVPXXXXXXXXXXXXXXXXGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFT 119
               FR+ T  +P                G  S I GYTGI  SSPTL+SAISNLTPAFTF 
Sbjct:    61 CSFRSRT--LPPMNFSILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFL 118

Query:   120 LAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWL 179
             LAV+FRME ++ +  S+ AK++GT+VSI GA +V LY GP + +  SP S     SL   
Sbjct:   119 LAVVFRMESVSFKRTSSVAKMLGTVVSIGGAFIVTLYNGPVV-IAKSPPSV----SLRSQ 173

Query:   180 MGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCL 239
               +P   NW+ G   LA + F + +W I+ TQI+  YPAE  V   Y++  +     + L
Sbjct:   174 STNP---NWILGAGFLAVEYFCVPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTL 230

Query:   240 FAEP-DLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAA 298
             F E  DL  W++KP++ALVSIV S   G   N  IHTW LR+KGP+++A+FKPLS+ IA 
Sbjct:   231 FTEGNDLGAWKIKPNIALVSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAV 290

Query:   299 ITGIIFLGDTLHLG 312
               G+IFL D+L++G
Sbjct:   291 AMGVIFLRDSLYIG 304

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091383 UMAMIT46 "AT3G28070" [Arabidopsis thaliana (taxid:3702)]

 Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
 Identities = 127/306 (41%), Positives = 187/306 (61%)

Query:     8 REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYXXXXXXXXXXXXIFRNTTT 67
             REA+ L+A + VE + VG++TLFK A SKGL+ Y F+ YSY             F N ++
Sbjct:    13 REAVFLTAMLVVETSVVGISTLFKFATSKGLNIYPFLGYSYLLASLLLLPSL-FFTNRSS 71

Query:    68 VVPXXXXXXXXXXXXXXXXGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
              +P                G +  I GY GI  SSPTL+SAI+N+TPA TF LA++FRME
Sbjct:    72 SLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFILAIIFRME 131

Query:   128 KLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSN 187
             K++ +  S+ AK++GT++S+ GALVV+ Y GP +FL +SP   +       L  S S S+
Sbjct:   132 KVSFKERSSLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPL--SSSNSD 189

Query:   188 WVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL-S 246
             W+ GG LL  Q   +S+  IL   I+++YPA   V+FLY +  +++   + L  E +  S
Sbjct:   190 WLIGGALLTMQGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVVEKNNPS 249

Query:   247 LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLG 306
             +W +  D+ L++IV  A +  S   +IH+W +R KGP+Y+AIFKPLS++IA + G IFL 
Sbjct:   250 VWIIHFDITLITIVTMAIV-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLN 308

Query:   307 DTLHLG 312
             D+L+LG
Sbjct:   309 DSLYLG 314

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091368 UMAMIT44 "AT3G28130" [Arabidopsis thaliana (taxid:3702)]

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 131/306 (42%), Positives = 180/306 (58%)

Query:     8 REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYXXXXXXXXXXXXIFRNTTT 67
             R+A+LL+A +A E   V +NTLFKAA SKGL+ Y F+ YSY            IF   + 
Sbjct:     9 RDAVLLTAMLATETGNVAMNTLFKAATSKGLNSYTFLIYSYLIGSIVLLPSH-IFSYRSR 67

Query:    68 VVPXXXXXXXXXXXXXXXXGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
              +P                G    I G+ GI  S+PTL+SAISN+ PA TF LA++FRME
Sbjct:    68 SLPSLSLSILCKIGVLGLLGSTYLITGFIGIEYSNPTLASAISNINPAITFILAIIFRME 127

Query:   128 KLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSN 187
             K + +  S+ AK++GT+VS+ GALVVVLY GP +F  +SP        L  L  S S S+
Sbjct:   128 KASFKEKSSVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPPFPQLRQLL--LPLSSSNSD 185

Query:   188 WVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL-S 246
             W+ GG LLA +  L+ +  IL   I+ +YPA   V+F Y L A+++   + + AE +  S
Sbjct:   186 WIIGGCLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNNPS 245

Query:   247 LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLG 306
             +W +  D+ LV IV      P +  I H W +R KGPVY+AIF+PLS++IA I G IFLG
Sbjct:   246 IWIIHFDITLVCIVVGGIFNPGYYAI-HLWAVRNKGPVYLAIFRPLSILIAVIMGAIFLG 304

Query:   307 DTLHLG 312
             D+ +LG
Sbjct:   305 DSFYLG 310

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091338 UMAMIT45 "AT3G28100" [Arabidopsis thaliana (taxid:3702)]

 Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
 Identities = 125/306 (40%), Positives = 186/306 (60%)

Query:     8 REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYXXXXXXXXXXXXIFRNTTT 67
             REA+ L+A +A E   VG++TLFK A SKGL+ Y F+ YSY             F + + 
Sbjct:    10 REAVFLTAMLATETGVVGISTLFKVATSKGLNLYAFLGYSYLLASLLLLPSL-FFTDRSR 68

Query:    68 VVPXXXXXXXXXXXXXXXXGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
              +P                G +  I GY GI  SSPTL+SAISN+TPA TF LA++FRME
Sbjct:    69 SLPPLSLSILSKIGLLGLLGSMYVITGYIGIEYSSPTLASAISNITPALTFILAIIFRME 128

Query:   128 KLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSN 187
             K++ +  S+ AK++GT++S+ GALVVVLY GP +F+ +SP   +       L  S S S+
Sbjct:   129 KVSFKERSSVAKVMGTILSLIGALVVVLYHGPRVFVASSPPYINFRQLSPPL--SSSNSD 186

Query:   188 WVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL-S 246
             W+ GG LL  +   +S+  IL  +I++ YPA   V+FLY +  +++   + L  E +  S
Sbjct:   187 WLIGGALLTIRDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNPS 246

Query:   247 LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLG 306
             +W ++ D+ L++IV  A +  S   +IH+W +R KGP+Y+AIFKPLS++IA +   +FL 
Sbjct:   247 VWIIRFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFLN 305

Query:   307 DTLHLG 312
             D+L+LG
Sbjct:   306 DSLYLG 311

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2173737 UMAMIT42 "Usually multiple acids move in and out Transporters 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 299 (110.3 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
 Identities = 73/174 (41%), Positives = 97/174 (55%)

Query:     8 REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYXXXXXXXXXXXXIFRNTTT 67
             R+  +L+A V  E + VG+NTL KAA SKGLS +V + YSY                + +
Sbjct:     9 RDGWILTAMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLTFFSFRSRS 68

Query:    68 VVPXXXXXXXXXXXXXXXXGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
             + P                    QI GY GI  SSPTLSSA+SN+ PAFTF LAV+FRME
Sbjct:    69 LPPLTFSILCNMGILGLIASAF-QILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRME 127

Query:   128 KLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMG 181
              ++L   S+ AK++GT++SI GALVV LY GP +       S+HS     W++G
Sbjct:   128 NISLGKKSSVAKVLGTILSIIGALVVTLYHGPMLM------SSHSD----WIIG 171

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2091393 UMAMIT47 "AT3G28080" [Arabidopsis thaliana (taxid:3702)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 121/306 (39%), Positives = 178/306 (58%)

Query:     8 REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYXXXXXXXXXXXXIFRNTTT 67
             REA+ L+A +A E + VGL+TLFK A SKGL+ Y F++YSY             F N + 
Sbjct:    10 REAVFLTAMLAGETSIVGLSTLFKVATSKGLNIYPFLSYSYLLASLLLLPSL-FFTNRSR 68

Query:    68 VVPXXXXXXXXXXXXXXXXGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
              +P                G +  I G  GI  S+PTL+SAI N+ PA TF LAV+FRME
Sbjct:    69 SLPPLSASILSKIGLLGFLGSMYVITGGIGIEYSNPTLASAIGNIVPALTFILAVIFRME 128

Query:   128 KLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSN 187
             K++ +  S+ AK++GT++S+ GA VV+ Y GP +F+ +SP   +       L  S S S+
Sbjct:   129 KVSFKERSSVAKVMGTILSLIGAFVVIFYHGPRVFVASSPPYLNFRQLSPPL--SSSKSD 186

Query:   188 WVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL-S 246
             W+ GG +L  Q   +S+  IL T I+  YP    V+ LY L  +++   + L  E +  S
Sbjct:   187 WLIGGAILTIQGIFVSVSFILQTHIMREYPEAFTVSILYILCISIVTSMIGLVVEKNNPS 246

Query:   247 LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLG 306
             +W +  D+ L +IV +  +  S   +IH+W +R K P+Y+AIFKPLS++IA + G IFL 
Sbjct:   247 IWIIHFDITLFTIVTTGII-TSVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTIFLN 305

Query:   307 DTLHLG 312
             D+L+LG
Sbjct:   306 DSLYLG 311

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2020688 UMAMIT36 "AT1G70260" [Arabidopsis thaliana (taxid:3702)]

 Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
 Identities = 94/312 (30%), Positives = 153/312 (49%)

Query:     5 KFFREALLLSATVAV-ECTTVGLNTLFKAAASKGLSYYVFVAYSYXXXXXXXXXXXXIF- 62
             K  R+ L+    +A+ E  T+ L  + K A + G+S +VFV Y+             +F 
Sbjct:     4 KVRRDELVPFVAMAIMEACTIALTIMAKTALTGGMSPFVFVVYTNAFGSILLLPFSFLFH 63

Query:    63 RNTTTVVPXXXXXXXXXXXXXXXXGV-LSQIFGYTGIACSSPTLSSAISNLTPAFTFTLA 121
             RN  T                   G+ + Q   + G+  SSP +  A+    P+F+F L+
Sbjct:    64 RNERTEQSIFSWPLLVRVFFLGFTGIFMFQNLAFVGLRFSSPIVVCAMGLQIPSFSFLLS 123

Query:   122 VLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMG 181
             ++    KL  R  ST+AK++GT+VS+SGA V  LYKGP I   +S S      S+  L+ 
Sbjct:   124 IILGRSKLDWRNTSTRAKLMGTIVSLSGAFVEELYKGPFIRPASSASPNRFLKSVPKLLV 183

Query:   182 SPSV-SNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLF 240
               ++  NW  G   LA   F +S+++++ T  +  YP  + VA  Y++   +  +   LF
Sbjct:   184 YYNLPDNWFLGCIFLAVAVFSVSLFNVVQTGTVKKYPHVMKVASFYSIVGTIQCLLFSLF 243

Query:   241 AEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAIT 300
              E DLS W+++P+  L  I+ +   G    T +H    ++KGP Y+ +FKP  +  A + 
Sbjct:   244 MERDLSAWKIQPNFDLYLIIATGTFGSVIRTSVHVKCTQMKGPYYVPLFKPFGIFWATLF 303

Query:   301 GIIFLGDTLHLG 312
             G  F  ++LH G
Sbjct:   304 GTSFFVNSLHYG 315

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2202745 UMAMIT35 "AT1G60050" [Arabidopsis thaliana (taxid:3702)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 91/301 (30%), Positives = 144/301 (47%)

Query:    19 VECTTVGLNTLFKAAASKGLSYYVFVAYSYXXXXXXXXXXXXIF-RNTTTVVPXXXXXXX 77
             +E  T+ L  L K A + G+S +VF+ Y+              F R+ +   P       
Sbjct:    20 MEACTIALTILAKTALTGGMSPFVFIVYTNALGSLLLLPYSFYFHRDESDDEPFLTKPSL 79

Query:    78 XXXXXXXXXGV-LSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEK-LALRTLS 135
                      GV L Q   + G++ SSP +  A+   +PAF+F L++    E  L   +  
Sbjct:    80 VRIFLLGFTGVFLFQNMAFLGLSYSSPIVVCAMGLQSPAFSFLLSLALGKEGGLGWASKR 139

Query:   136 TQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSL----HWLMGSPSVSNWVTG 191
             T+ ++IGT++  +GA V V+Y GP  F+  SP S+ ++N L    H+L    +  NW  G
Sbjct:   140 TKGRVIGTLICFTGAFVEVIYLGP--FIRPSPPSSPTSNFLTTISHYLTFFKNSDNWALG 197

Query:   192 GFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLK 251
               LLA     +SIW+I+    +  YP  + V   Y+L   +       F EPDLS W LK
Sbjct:   198 SLLLACATLSISIWNIIQLDTVQKYPQVMKVVSAYSLAGTLQCAIFSAFMEPDLSAWELK 257

Query:   252 PDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL 311
              ++ L  I+ +   G    T +     ++KGP Y+ +FKP  ++ A+I G  F  ++LH 
Sbjct:   258 LNMDLYLIIATGIFGSIIRTSVQVKCSKMKGPYYVPLFKPFGILWASIFGTSFFVNSLHY 317

Query:   312 G 312
             G
Sbjct:   318 G 318

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FL08	WTR42_ARATH	No assigned EC number	0.5598	0.9808	0.8342	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	313
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	5e-74

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  231 bits (590), Expect = 5e-74
 Identities = 141/306 (46%), Positives = 203/306 (66%), Gaps = 5/306 (1%)

Query: 8   REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTT 67
           REA+ L+A +A E + VG++TLFK A SKGL+ Y F+ YSY LA+L LLP  L F N + 
Sbjct: 10  REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLP-SLFFTNRSR 68

Query: 68  VVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
            +P    SILS+I LL F+G +  I GY GI  S+PTL+SAISN+TPA TF LA++FRME
Sbjct: 69  SLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRME 128

Query: 128 KLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSN 187
           K++ +  S+ AK++GT++S+ GALVV+ Y GP +F+ +SP   +       L  S S S+
Sbjct: 129 KVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPL--SSSNSD 186

Query: 188 WVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEP-DLS 246
           W+ GG LL  Q   +S+  IL   I++ YPA   V+FLY +  +++   + L  E  + S
Sbjct: 187 WLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPS 246

Query: 247 LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLG 306
           +W +  D+ L++IV  A +  S   +IH+W +R KGP+Y+AIFKPLS++IA + G IFL 
Sbjct: 247 VWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLN 305

Query: 307 DTLHLG 312
           D+L+LG
Sbjct: 306 DSLYLG 311

Length = 358

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	313
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.98
PRK11689	295	aromatic amino acid exporter; Provisional	99.97
PRK15430	296	putative chloramphenical resistance permease RarD;	99.97
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.97
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.97
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.96
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.94
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.94
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.91
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.89
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.88
COG2962	293	RarD Predicted permeases [General function predict	99.82
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.8
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.8
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.66
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.51
KOG2765	416	consensus Predicted membrane protein [Function unk	99.49
COG2510	140	Predicted membrane protein [Function unknown]	99.48
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.43
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.2
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.19
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.19
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.09
KOG2766	336	consensus Predicted membrane protein [Function unk	99.06
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	98.99
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	98.91
COG2510	140	Predicted membrane protein [Function unknown]	98.9
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.86
PRK11272	292	putative DMT superfamily transporter inner membran	98.85
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	98.81
PLN00411	358	nodulin MtN21 family protein; Provisional	98.74
PRK11689	295	aromatic amino acid exporter; Provisional	98.73
KOG1443	349	consensus Predicted integral membrane protein [Fun	98.67
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.63
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.57
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.55
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.54
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.51
PRK15430	296	putative chloramphenical resistance permease RarD;	98.47
KOG1580	337	consensus UDP-galactose transporter related protei	98.44
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.36
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.34
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.24
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.23
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.23
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.22
KOG1581	327	consensus UDP-galactose transporter related protei	98.01
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.88
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.86
KOG3912	372	consensus Predicted integral membrane protein [Gen	97.82
PRK13499	345	rhamnose-proton symporter; Provisional	97.82
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	97.81
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	97.74
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	97.65
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	97.57
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.39
PF13536	113	EmrE: Multidrug resistance efflux transporter	97.36
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.25
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.14
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.11
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.83
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.68
COG2962	293	RarD Predicted permeases [General function predict	96.65
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.54
COG2076	106	EmrE Membrane transporters of cations and cationic	96.52
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.52
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.36
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.3
PRK11431	105	multidrug efflux system protein; Provisional	96.26
PRK13499	345	rhamnose-proton symporter; Provisional	96.2
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.12
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.07
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.94
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.75
KOG4510	346	consensus Permease of the drug/metabolite transpor	95.24
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.22
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	94.03
KOG1582	367	consensus UDP-galactose transporter related protei	93.94
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	92.97
KOG1580	337	consensus UDP-galactose transporter related protei	92.63
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	92.22
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	90.98
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	90.64
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	90.5
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	89.94
KOG2765	416	consensus Predicted membrane protein [Function unk	88.12
KOG1443	349	consensus Predicted integral membrane protein [Fun	84.67
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	84.41

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=1.9e-37  Score=291.22  Aligned_cols=298  Identities=46%  Similarity=0.791  Sum_probs=230.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHH
Q 021354            9 EALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGV   88 (313)
Q Consensus         9 ~~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   88 (313)
                      +.++++.++.+++.+++..++.|.+++.+++|+.++++|+.+|+++++++.+.+ +|++++++.+++++.++.+.|+++.
T Consensus        11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~-~~~~~~~~~~~~~~~~l~l~g~~g~   89 (358)
T PLN00411         11 EAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFT-NRSRSLPPLSVSILSKIGLLGFLGS   89 (358)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHH-HHhcccCcchHHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999999999999999999987665 3322213445778888989999886


Q ss_pred             HHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCC
Q 021354           89 LSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPS  168 (313)
Q Consensus        89 ~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~  168 (313)
                      .++.+++.|++|+++++++++.+++|+++.+++++++.|+++.++|.++.+++|++++++|+.++...+++......+++
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~  169 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPP  169 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence            67789999999999999999999999999999999954444444444444999999999999987764443210000000


Q ss_pred             --CCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCC-C
Q 021354          169 --STHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPD-L  245 (313)
Q Consensus       169 --~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-~  245 (313)
                        +......+.    .....++..|+++++++++|||+|++++|+..++++++...++|++.++++.+.+.+...+++ .
T Consensus       170 ~~~~~~~~~~~----~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~  245 (358)
T PLN00411        170 YLNFRQLSPPL----SSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNP  245 (358)
T ss_pred             ccccccccccc----CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence              000000000    011234567999999999999999999999988887666788899998888887777665532 2


Q ss_pred             ccccccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCccccC
Q 021354          246 SLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG  312 (313)
Q Consensus       246 ~~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~~  312 (313)
                      ..|...++.....++|.++. +.++|.+|++++++.||+++|.+.+++|++++++|++++||++++.
T Consensus       246 ~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~  311 (358)
T PLN00411        246 SVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG  311 (358)
T ss_pred             ccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH
Confidence            23322222334567888875 6789999999999999999999999999999999999999999874

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=1.3e-31  Score=246.36  Aligned_cols=261  Identities=14%  Similarity=0.135  Sum_probs=215.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHH
Q 021354            8 REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG   87 (313)
Q Consensus         8 ~~~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   87 (313)
                      +-..-++.+++..++||++++++|...+ ++||.+++++|+.+++++++++...+ +++ .   .+++++......|.++
T Consensus         5 ~~~~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~-~~~-~---~~~~~~~~~~~~g~~~   78 (292)
T PRK11272          5 QLLPLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLR-GHP-L---PTLRQWLNAALIGLLL   78 (292)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHh-CCC-C---CcHHHHHHHHHHHHHH
Confidence            3445567888899999999999999876 69999999999999999998886554 222 1   2456777788888887


Q ss_pred             -HHHHHHHHHHh-hccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCC
Q 021354           88 -VLSQIFGYTGI-ACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGT  165 (313)
Q Consensus        88 -~~~~~~~~~gl-~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~  165 (313)
                       ..++.+++.+. +++++++++++.++.|+++.+++++ +|||++++      +++|++++++|+.++... + +     
T Consensus        79 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~~-~-~-----  144 (292)
T PRK11272         79 LAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNSG-G-N-----  144 (292)
T ss_pred             HHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhcC-c-c-----
Confidence             67888899999 9999999999999999999999985 69999999      999999999999876531 1 0     


Q ss_pred             CCCCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 021354          166 SPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL  245 (313)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~  245 (313)
                                        .+ ....|+++.+++++|||.|++..|+..++.  +...+.+++.+++..+.+.....+.+.
T Consensus       145 ------------------~~-~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (292)
T PRK11272        145 ------------------LS-GNPWGAILILIASASWAFGSVWSSRLPLPV--GMMAGAAEMLAAGVVLLIASLLSGERL  203 (292)
T ss_pred             ------------------cc-cchHHHHHHHHHHHHHHHHHHHHHhcCCCc--chHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence                              01 124799999999999999999999865432  356778899999888888776544322


Q ss_pred             ccccccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          246 SLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       246 ~~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      ..  .++...|..++|++++++.++|.+|++++|+.++++++.+.+++|+++++++++++||+++.
T Consensus       204 ~~--~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~  267 (292)
T PRK11272        204 TA--LPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSP  267 (292)
T ss_pred             cc--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence            11  11235688999999999999999999999999999999999999999999999999999985

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.98  E-value=2.2e-30  Score=238.88  Aligned_cols=257  Identities=14%  Similarity=0.105  Sum_probs=199.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHH-HHHH
Q 021354           13 LSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-VLSQ   91 (313)
Q Consensus        13 ~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~   91 (313)
                      .+..++++++||++++++|.+++ ++||.++.++|+.++++.+.++.. +  ++.     +++   .....|+.. ...+
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~~~l~~~~~-~--~~~-----~~~---~~~~~g~~~~~~~~   73 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLH-NMPPLMLAGLRFMLVAFPAIFFVA-R--PKV-----PLN---LLLGYGLTISFGQF   73 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHhc-C--CCC-----chH---HHHHHHHHHHHHHH
Confidence            45678899999999999999887 599999999999998877766532 1  111     122   233445555 4566


Q ss_pred             HHHHHHhhcc-CchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCCC
Q 021354           92 IFGYTGIACS-SPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSST  170 (313)
Q Consensus        92 ~~~~~gl~~t-~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~~  170 (313)
                      .+++.+++|+ ++++++++.++.|+++.+++++++|||++++      +++|++++++|+.++..  + +.         
T Consensus        74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~--~-~~---------  135 (299)
T PRK11453         74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIE--D-SL---------  135 (299)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhcc--c-cC---------
Confidence            6788999985 7899999999999999999999999999999      99999999999987763  1 00         


Q ss_pred             CCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChh--HHHHHHHHHHHHHHHHHHHhhcCCCC---
Q 021354          171 HSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAE--LLVAFLYNLFAAVIAVPLCLFAEPDL---  245 (313)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~--~~~t~~~~l~~~~~~~~~~~~~~~~~---  245 (313)
                                 . .......|+++++.++++|++|++.+|+..++.+++  ...+.++++.+.+.....+...+++.   
T Consensus       136 -----------~-~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (299)
T PRK11453        136 -----------N-GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI  203 (299)
T ss_pred             -----------C-CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh
Confidence                       0 011124799999999999999999999976554322  34456666666665555444444321   


Q ss_pred             ccccccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          246 SLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       246 ~~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      .++...+...|..++|+|+++++++|.+|++++++.++++++.+.+++|+++++++++++||++++
T Consensus       204 ~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~  269 (299)
T PRK11453        204 HSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTG  269 (299)
T ss_pred             hhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence            111122335688999999999999999999999999999999999999999999999999999986

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.97  E-value=2.8e-30  Score=237.77  Aligned_cols=262  Identities=15%  Similarity=0.102  Sum_probs=193.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHH-H
Q 021354           10 ALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-V   88 (313)
Q Consensus        10 ~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~   88 (313)
                      .+.++.++++.++||++++..|.+++ ++||..++++|+.++++++.++.. +  ++.  ++.+++    ....+.++ .
T Consensus         3 ~~~~l~~l~a~~~Wg~~~~~~k~~~~-~~~P~~~~~~R~~~a~l~l~~~~~-~--~~~--~~~~~~----~~~~~~l~~~   72 (295)
T PRK11689          3 QKATLIGLIAILLWSTMVGLIRGVSE-SLGPVGGAAMIYSVSGLLLLLTVG-F--PRL--RQFPKR----YLLAGGLLFV   72 (295)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHHHHHHcc-c--ccc--ccccHH----HHHHHhHHHH
Confidence            45688899999999999999999876 599999999999999998887632 1  111  111222    22344444 6


Q ss_pred             HHHHHHHHHhhc----cCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccC
Q 021354           89 LSQIFGYTGIAC----SSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLG  164 (313)
Q Consensus        89 ~~~~~~~~gl~~----t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~  164 (313)
                      .++.+++.|++|    +++++++++.+++|+++.+++++++|||++++      +++|++++++|+.++.. .+.+.+. 
T Consensus        73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~-~~~~~~~-  144 (295)
T PRK11689         73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLG-GDNGLSL-  144 (295)
T ss_pred             HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheec-CCccchh-
Confidence            777888888865    47788899999999999999999999999999      99999999999987763 1110000 


Q ss_pred             CCCCCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 021354          165 TSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPD  244 (313)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~  244 (313)
                       +  +      .     .....+...|+++++.+++|||.|++..||..++.+ +...  . ...+++.+.+.....+ +
T Consensus       145 -~--~------~-----~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~--~-~~~~~~~l~~~~~~~~-~  205 (295)
T PRK11689        145 -A--E------L-----INNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITL--F-FILTALALWIKYFLSP-Q  205 (295)
T ss_pred             -h--h------h-----hhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhH--H-HHHHHHHHHHHHHHhc-C
Confidence             0  0      0     000012246999999999999999999999876653 4433  2 2333333333333322 2


Q ss_pred             CccccccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          245 LSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       245 ~~~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      + ..+. +...|..++|.++ +++++|.+|++++|+.++++++.+.+++|++++++|++++||+++.
T Consensus       206 ~-~~~~-~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~  269 (295)
T PRK11689        206 P-AMVF-SLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSF  269 (295)
T ss_pred             c-cccC-CHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcH
Confidence            1 1122 2346777788885 8999999999999999999999999999999999999999999985

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.97  E-value=7.8e-30  Score=234.90  Aligned_cols=262  Identities=11%  Similarity=0.038  Sum_probs=195.0

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCcc-CCCc-cHHHHHHHHH
Q 021354            5 KFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTV-VPSF-KFSILSRIIL   82 (313)
Q Consensus         5 ~~~~~~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~-~~~~-~~~~~~~~~~   82 (313)
                      ||+++.++++.+++++++||.+++++|.. + ++||.+++++|+.++.+++.++...+ +++.. .++. +++++.. ..
T Consensus         2 ~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~-~~   77 (296)
T PRK15430          2 DAKQTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSIC-RQWSYLKTLIQTPQKIFM-LA   77 (296)
T ss_pred             CchhhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHcCHHHHHH-HH
Confidence            56788899999999999999999999985 4 59999999999999998887776544 21110 0011 2333322 33


Q ss_pred             HHHHH-HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCcc
Q 021354           83 LSFIG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTI  161 (313)
Q Consensus        83 ~g~~~-~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~  161 (313)
                      .+.++ ..++.++++|++++|+++++++.++.|+++.+++++++|||++++      +|.|++++++|+.++... .   
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~-~---  147 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWT-F---  147 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHH-c---
Confidence            55555 778999999999999999999999999999999999999999999      999999999999887631 0   


Q ss_pred             ccCCCCCCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhc-ChhHHHHHHHHHHHHHHHHHHHhh
Q 021354          162 FLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIY-PAELLVAFLYNLFAAVIAVPLCLF  240 (313)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~-~~~~~~t~~~~l~~~~~~~~~~~~  240 (313)
                                             +..    ..+.++++++||.|++..|+..++. .+....+.+++.++.....+..  
T Consensus       148 -----------------------~~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  198 (296)
T PRK15430        148 -----------------------GSL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA--  198 (296)
T ss_pred             -----------------------CCc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc--
Confidence                                   111    1468889999999999998864322 1223445556655554433221  


Q ss_pred             cCCCCccccccChhhHHH-HHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCccccC
Q 021354          241 AEPDLSLWRLKPDVALVS-IVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG  312 (313)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~-ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~~  312 (313)
                       +++...+..++ ..+.. +++.|+ .+.++|.+|++++++.+++++|++.+++|++++++|++++||++++.
T Consensus       199 -~~~~~~~~~~~-~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~  268 (296)
T PRK15430        199 -DSSTSHMGQNP-MSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGAD  268 (296)
T ss_pred             -cCCcccccCCc-HHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHH
Confidence             11111122111 22233 334454 78899999999999999999999999999999999999999999863

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.97  E-value=1.7e-29  Score=227.68  Aligned_cols=244  Identities=18%  Similarity=0.260  Sum_probs=203.8

Q ss_pred             HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHH-HHHHHHHHHHhhcc
Q 021354           23 TVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-VLSQIFGYTGIACS  101 (313)
Q Consensus        23 ~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~gl~~t  101 (313)
                      ||.+++..|..++++.||.+..+.|+..+.+++.+....   +  +    +++++.+....|.++ ..++.++++|++|+
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~---~--~----~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~   71 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR---R--P----PLKRLLRLLLLGALQIGVFYVLYFVAVKRL   71 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh---c--c----CHhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            899999999998877999999999999998888776432   1  1    234455677888877 78999999999999


Q ss_pred             CchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCCCCCCCccccccC
Q 021354          102 SPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMG  181 (313)
Q Consensus       102 ~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~  181 (313)
                      ++++++++.++.|+++.+++++++|||++++      +++|++++++|+.++.. ++                       
T Consensus        72 ~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~-~~-----------------------  121 (260)
T TIGR00950        72 PVGEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS-DG-----------------------  121 (260)
T ss_pred             ChhhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc-CC-----------------------
Confidence            9999999999999999999999999999999      99999999999987653 11                       


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcCh-hHHHHHHHHHHHHHHHHHHHhhcCCCCccccccChhhHHHHH
Q 021354          182 SPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPA-ELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIV  260 (313)
Q Consensus       182 ~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~-~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  260 (313)
                        .+.....|+.+++.++++|+.+.+..|+..++.+. +...+.+++.++.+.+.+.....+++. .  . +...+..++
T Consensus       122 --~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~--~-~~~~~~~~~  195 (260)
T TIGR00950       122 --NLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-Q--A-LSLQWGALL  195 (260)
T ss_pred             --cccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-C--c-chHHHHHHH
Confidence              01223589999999999999999999998766542 245555788899888888876544322 1  1 234677789


Q ss_pred             HHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          261 YSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       261 ~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      +.+++++.++|.+|++++|+.++++++.+.+++|+++++++++++||+++.
T Consensus       196 ~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~  246 (260)
T TIGR00950       196 YLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSL  246 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence            999999999999999999999999999999999999999999999999985

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.97  E-value=1.7e-28  Score=225.74  Aligned_cols=258  Identities=17%  Similarity=0.126  Sum_probs=203.5

Q ss_pred             chhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHH
Q 021354            4 RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILL   83 (313)
Q Consensus         4 ~~~~~~~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (313)
                      || ..+.+++..++++++.|+.++.++|.+.++ +||.+++++|+.+++++++++...+  + .   +.+++++......
T Consensus         6 ~~-~~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~~--~-~---~~~~~~~~~~~~~   77 (293)
T PRK10532          6 RK-LPVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKPW--R-L---RFAKEQRLPLLFY   77 (293)
T ss_pred             cc-cccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhHH--h-c---cCCHHHHHHHHHH
Confidence            44 455888999999999999999999999875 9999999999999999888765322  1 1   2345667777788


Q ss_pred             HHHHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCcccc
Q 021354           84 SFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFL  163 (313)
Q Consensus        84 g~~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~  163 (313)
                      |+.....+.+++++++|+|++.++++.++.|+++.+++    +||.  +      ++.+++++++|+.++.. .+.+   
T Consensus        78 g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~--~------~~~~~~i~~~Gv~li~~-~~~~---  141 (293)
T PRK10532         78 GVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRP--V------DFVWVVLAVLGLWFLLP-LGQD---  141 (293)
T ss_pred             HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCCh--H------HHHHHHHHHHHHheeee-cCCC---
Confidence            88777778889999999999999999999999998876    2433  2      34567788999887652 1110   


Q ss_pred             CCCCCCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCC
Q 021354          164 GTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEP  243 (313)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~  243 (313)
                                          .+.....|+++.++++++||.|++..|+..++.+ +... .++.+++++.+.+.....++
T Consensus       142 --------------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~  199 (293)
T PRK10532        142 --------------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAG  199 (293)
T ss_pred             --------------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccC
Confidence                                0112257999999999999999999999876664 4555 56677788777777655432


Q ss_pred             CCccccccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          244 DLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       244 ~~~~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                       ...+   +...+..++|+|+++|.++|.+|+++++|.+++++|.+.++||++++++|++++||+++.
T Consensus       200 -~~~~---~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~  263 (293)
T PRK10532        200 -EALW---HWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTL  263 (293)
T ss_pred             -cccC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcH
Confidence             1111   123455678999999999999999999999999999999999999999999999999985

>TIGR00688 rarD rarD protein

Probab=99.96  E-value=2.5e-27  Score=213.66  Aligned_cols=249  Identities=9%  Similarity=0.025  Sum_probs=182.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCc----cCCCccHH-HHHHHHHHHH
Q 021354           11 LLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTT----VVPSFKFS-ILSRIILLSF   85 (313)
Q Consensus        11 ~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~g~   85 (313)
                      |++++++++.++||.+++++|. ++ ++||.+++++|+.++++++.++...+ ++++    +.++.+++ ++..+...|+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLF-RQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHH-cchHHHHHHHhCcccchHHHHHHHHHH
Confidence            4688999999999999999998 45 59999999999999998887765443 2211    10111222 2444666777


Q ss_pred             HHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCC
Q 021354           86 IGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGT  165 (313)
Q Consensus        86 ~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~  165 (313)
                      ....++.++++|++|+++++++++.+++|+++.+++++++|||++++      +|+|++++++|+.++... +       
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~-~-------  144 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVL-K-------  144 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHH-c-------
Confidence            77889999999999999999999999999999999999999999999      999999999999876531 0       


Q ss_pred             CCCCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 021354          166 SPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL  245 (313)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~  245 (313)
                                         +..    ..+.+++++||+.|.+..|+..++. . ...... .+.......+.... ++.+
T Consensus       145 -------------------~~~----~~~~l~aa~~~a~~~i~~~~~~~~~-~-~~~~~~-~~~~~~~~~~~~~~-~~~~  197 (256)
T TIGR00688       145 -------------------GSL----PWEALVLAFSFTAYGLIRKALKNTD-L-AGFCLE-TLSLMPVAIYYLLQ-TDFA  197 (256)
T ss_pred             -------------------CCc----hHHHHHHHHHHHHHHHHHhhcCCCC-c-chHHHH-HHHHHHHHHHHHHH-hccC
Confidence                               111    1357889999999999999865432 2 222111 11111111111111 1111


Q ss_pred             ccccccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHH
Q 021354          246 SLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIF  304 (313)
Q Consensus       246 ~~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~  304 (313)
                      .....++..+|..+++.|+. +.++|.+|++++|+.++++++.+.|++|+++++++++.
T Consensus       198 ~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       198 TVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             cccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            11111122367778888875 88999999999999999999999999999999999875

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.94  E-value=2.8e-25  Score=203.14  Aligned_cols=260  Identities=16%  Similarity=0.068  Sum_probs=188.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHHHH
Q 021354           13 LSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQI   92 (313)
Q Consensus        13 ~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   92 (313)
                      ++..+.++++|+......|...++ -++  ..++++..+++++.|+...++.++.+ +..+++.+......++.+..++.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGW-SRLPATFWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCC-CCcchhhHHHHHHHHHHHHHHHH
Confidence            567788999999999999965454 344  35888888888888876543012222 22233444344444444488999


Q ss_pred             HHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCCCCC
Q 021354           93 FGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHS  172 (313)
Q Consensus        93 ~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~~~~  172 (313)
                      +++.|++++++++++.+.++.|+++.+++++++|||++++      +|+|+++++.|+.++.. ++.             
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~-~~~-------------  138 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGL-SRF-------------  138 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhc-ccc-------------
Confidence            9999999999999999999999999999999999999999      99999999999987663 110             


Q ss_pred             CCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcCh---hHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 021354          173 TNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPA---ELLVAFLYNLFAAVIAVPLCLFAEPDLSLWR  249 (313)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~---~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~  249 (313)
                                  +.....|+.+++++++||+.|++..|+..++.++   ....+.++++.+++...+.....++.  .+.
T Consensus       139 ------------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  204 (281)
T TIGR03340       139 ------------AQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGR--SMF  204 (281)
T ss_pred             ------------cccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhcc--chh
Confidence                        1112367889999999999999998875443321   11233344433322222222211211  111


Q ss_pred             ccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          250 LKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       250 ~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      . ++..+..+++.+.+.+.++|.+|++++++.++++++.+.+++|++++++|++++||+++.
T Consensus       205 ~-~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~  265 (281)
T TIGR03340       205 P-YARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYL  265 (281)
T ss_pred             h-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccH
Confidence            1 223456778899999999999999999999999999999999999999999999999986

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.94  E-value=1.2e-24  Score=200.90  Aligned_cols=248  Identities=10%  Similarity=0.058  Sum_probs=189.5

Q ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhh
Q 021354           28 TLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSS  107 (313)
Q Consensus        28 ~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~gl~~t~a~~as  107 (313)
                      ..-|..+++--+|..++++|+.++.+.+.+... . +.+++ ++.+++++.+.+..|+++..++.+...|++|+++++++
T Consensus        19 ~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~-~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~   95 (302)
T TIGR00817        19 IYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-S-GLPKR-LKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTH   95 (302)
T ss_pred             HHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-h-CCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence            357888875367999999999999877665521 1 11122 34678899999999999988889999999999999999


Q ss_pred             hhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCCCCCCCccccccCCCCCCc
Q 021354          108 AISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSN  187 (313)
Q Consensus       108 ~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (313)
                      ++.+++|+++.+++++++|||++++      ++.|++++++|+.+...  +                        +.+. 
T Consensus        96 li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~~--~------------------------~~~~-  142 (302)
T TIGR00817        96 TIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALASD--T------------------------ELSF-  142 (302)
T ss_pred             HHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhcC--C------------------------cccc-
Confidence            9999999999999999999999999      99999999999975321  1                        0112 


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHh--hcChhHHHHHHHHHHHHHHHHHHHhhcCCCCc---cccc-----cChhhHH
Q 021354          188 WVTGGFLLAAQCFLLSIWSILLTQIIN--IYPAELLVAFLYNLFAAVIAVPLCLFAEPDLS---LWRL-----KPDVALV  257 (313)
Q Consensus       188 ~~~G~ll~l~aa~~~a~~~v~~k~~~~--~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~  257 (313)
                      ...|++++++++++|++|++..||..+  +. ++...+.+++..+++.++|.....|+...   ++..     .....+.
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYT  221 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHH
Confidence            247999999999999999999999876  55 46899999999999999998876553211   1100     0000111


Q ss_pred             HHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCccccC
Q 021354          258 SIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG  312 (313)
Q Consensus       258 ~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~~  312 (313)
                      ..++.+..+....+.++++++++.+|++.+...+++|++++++|++++||+++..
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~  276 (302)
T TIGR00817       222 VSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ  276 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh
Confidence            1222222222222245568999999999999999999999999999999999863

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.91  E-value=2.1e-22  Score=189.56  Aligned_cols=250  Identities=16%  Similarity=0.137  Sum_probs=191.0

Q ss_pred             HHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCc--cHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 021354           24 VGLNTLFKAAASKGLS-YYVFVAYSYPLATLALLPLPLIFRNTTTVVPSF--KFSILSRIILLSFIGVLSQIFGYTGIAC  100 (313)
Q Consensus        24 g~~~~~~K~~l~~~~~-p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~gl~~  100 (313)
                      .......|..++. +| |..+.++|+.++.++........ .++ + ++.  .++++..++..|+++...+...+.|+++
T Consensus        62 ~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~-~-~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~  137 (350)
T PTZ00343         62 VLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRK-I-PRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGL  137 (350)
T ss_pred             HHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCC-C-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            3334558988875 99 99999999999987655443321 111 1 223  3457788899999985445556799999


Q ss_pred             cCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCCCCCCCcccccc
Q 021354          101 SSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLM  180 (313)
Q Consensus       101 t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~  180 (313)
                      ++++.+.++-++.|+++.+++++++|||++++      ++.++++++.|+.+...  + +                    
T Consensus       138 ~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~--~-~--------------------  188 (350)
T PTZ00343        138 GAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV--K-E--------------------  188 (350)
T ss_pred             ccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec--c-c--------------------
Confidence            99999999999999999999999999999999      99999999999987552  1 0                    


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcC------hhHHHHHHHHHHHHHHHHHHHhhcCCCC--cccc---
Q 021354          181 GSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYP------AELLVAFLYNLFAAVIAVPLCLFAEPDL--SLWR---  249 (313)
Q Consensus       181 ~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~------~~~~~t~~~~l~~~~~~~~~~~~~~~~~--~~~~---  249 (313)
                         .+. ...|++++++|+++|+.|++..|+..++.+      ++.....++.+.+++.++|+....|...  ..+.   
T Consensus       189 ---~~~-~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~  264 (350)
T PTZ00343        189 ---LHF-TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYT  264 (350)
T ss_pred             ---chh-HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence               112 257999999999999999999999765431      2455666678899999999887555321  1110   


Q ss_pred             -ccChhhHHHHHHHHhhhhHHHHHHHHH----HhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          250 -LKPDVALVSIVYSAFLGPSFNTIIHTW----GLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       250 -~~~~~~~~~ll~lgv~~s~~~~~l~~~----~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                       ......+..+++. ++.++++|.+|+.    ++++.+|...+...+++|++++++|++++||++++
T Consensus       265 ~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~  330 (350)
T PTZ00343        265 ANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTL  330 (350)
T ss_pred             hcccccchHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCch
Confidence             0011122344554 5678999999995    99999999999999999999999999999999985

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.89  E-value=5.6e-21  Score=173.62  Aligned_cols=262  Identities=24%  Similarity=0.318  Sum_probs=196.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHH
Q 021354            8 REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG   87 (313)
Q Consensus         8 ~~~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   87 (313)
                      +........+...+.|+.+....|...++..++....+.|+..+.+.+.+.....  +... ++ ..++.......+.++
T Consensus         4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~-~~~~~~~~~~~~~~~   79 (292)
T COG0697           4 ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLE--PRGL-RP-ALRPWLLLLLLALLG   79 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhh--cccc-cc-cccchHHHHHHHHHH
Confidence            3445667777788999999999999866547778888889999998855443322  1111 11 122233455556565


Q ss_pred             -HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHH-HHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCC
Q 021354           88 -VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAV-LFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGT  165 (313)
Q Consensus        88 -~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~-~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~  165 (313)
                       ..++.+++.++++++++.++.+.++.|+++.++++ ++++||++++      ++.|+++++.|+.++... +.      
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~-~~------  146 (292)
T COG0697          80 LALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLG-GG------  146 (292)
T ss_pred             HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecC-CC------
Confidence             78999999999999999999999999999999997 6679999999      999999999999887641 10      


Q ss_pred             CCCCCCCCCccccccCCCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHH-HHHHHHHHHHHHHHhhcCC
Q 021354          166 SPSSTHSTNSLHWLMGSPSVSN-WVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAF-LYNLFAAVIAVPLCLFAEP  243 (313)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~-~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~-~~~l~~~~~~~~~~~~~~~  243 (313)
                                        .+.. ...|+++.+.++++|+++.+..|+.. +.+ +..... ++.+ +...........+.
T Consensus       147 ------------------~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~  205 (292)
T COG0697         147 ------------------GGGILSLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLL-LALLLLLLFFLSGF  205 (292)
T ss_pred             ------------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHH-HHHHHHHHHHhccc
Confidence                              0111 36899999999999999999999876 443 345555 4444 22222211111111


Q ss_pred             CCccccccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          244 DLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       244 ~~~~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      +   . ......+..+.+.|++++++++.+|++++++.+++.++.+.+++|+++++++++++||+++.
T Consensus       206 ~---~-~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~  269 (292)
T COG0697         206 G---A-PILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSP  269 (292)
T ss_pred             c---c-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcH
Confidence            1   1 11234678888999999999999999999999999999999999999999999999999975

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.88  E-value=4e-20  Score=171.22  Aligned_cols=279  Identities=18%  Similarity=0.197  Sum_probs=202.0

Q ss_pred             hhhhhhHHHHHHHHHHH---HHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHH
Q 021354            5 KFFREALLLSATVAVEC---TTVGLNTLFKAAASKGLS-YYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRI   80 (313)
Q Consensus         5 ~~~~~~~~~l~l~~~~~---~~g~~~~~~K~~l~~~~~-p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   80 (313)
                      ++.++++-+..+++++.   +-.++.+.....-+.+.+ |..-.++-+..-.++..+....+++++.. .+..++++++.
T Consensus         4 ~~~~~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~-~~~~~~~~w~y   82 (334)
T PF06027_consen    4 SFLFTRRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKW-LKVLKRPWWKY   82 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccc-hhhcchhHHHH
Confidence            33455555555554433   444445555544444444 55555555555555555655444233222 23345677888


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCc
Q 021354           81 ILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPT  160 (313)
Q Consensus        81 ~~~g~~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~  160 (313)
                      ++++++....+++...|++||+.+.+.++..+.-.++.+++++++|||.++.      |++|+++|+.|+.++...+.  
T Consensus        83 ~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~--  154 (334)
T PF06027_consen   83 FLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDV--  154 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeecc--
Confidence            8999999999999999999999999999998888899999999999999999      99999999999888775211  


Q ss_pred             cccCCCCCCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhh
Q 021354          161 IFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLF  240 (313)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~  240 (313)
                      .+  .+        .      ...+++..+||++++.|+++||++++.+++..++.+ ..++..+..++|.++..+...+
T Consensus       155 ~~--~~--------~------~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~i  217 (334)
T PF06027_consen  155 LS--GS--------D------SSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAI  217 (334)
T ss_pred             cc--cc--------c------CCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHh
Confidence            10  00        0      112455689999999999999999999999998876 5788888889999988888777


Q ss_pred             cCCC-CccccccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          241 AEPD-LSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       241 ~~~~-~~~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      +|.+ ....+.  +...........++...-|.+....++..+|+.+.+-..+..+++++++++++||++++
T Consensus       218 le~~~i~~~~w--~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~  287 (334)
T PF06027_consen  218 LERSGIESIHW--TSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSW  287 (334)
T ss_pred             eehhhhhccCC--ChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccH
Confidence            7654 222222  22222222222235567777888999999999999999999999999999999999886

Some of the sequences in this family are annotated as putative membrane proteins.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.82  E-value=4.5e-18  Score=151.27  Aligned_cols=261  Identities=13%  Similarity=0.098  Sum_probs=201.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCcc-CCCccHHHHHHHHHHHHHH
Q 021354            9 EALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTV-VPSFKFSILSRIILLSFIG   87 (313)
Q Consensus         9 ~~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~   87 (313)
                      ..++++..+.+.++||..+...|.. ++ .|+.++.++|..-+..++.......|+++.. .-..+.+.+......++..
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li   82 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL-EP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI   82 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence            4678999999999999999999985 54 9999999999999987776655544122111 0012334556666667776


Q ss_pred             HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCC
Q 021354           88 VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSP  167 (313)
Q Consensus        88 ~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~  167 (313)
                      ..++..+.|+..+...-++|.=++..|++..+++.+++|||+++-      ||++++++.+|+.......|         
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g---------  147 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLG---------  147 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcC---------
Confidence            889999999999999999999999999999999999999999999      99999999999987765221         


Q ss_pred             CCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 021354          168 SSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSL  247 (313)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~  247 (313)
                                       +..|     ..+.=+++|+.|...-|+.  +.+ +.+-....++.-....+...+..+...+.
T Consensus       148 -----------------~lpw-----val~la~sf~~Ygl~RK~~--~v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~  202 (293)
T COG2962         148 -----------------SLPW-----VALALALSFGLYGLLRKKL--KVD-ALTGLTLETLLLLPVALIYLLFLADSGQF  202 (293)
T ss_pred             -----------------CCcH-----HHHHHHHHHHHHHHHHHhc--CCc-hHHhHHHHHHHHhHHHHHHHHHHhcCchh
Confidence                             2223     5666788999999876543  333 36666777777777777666655543321


Q ss_pred             ccccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCccccC
Q 021354          248 WRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG  312 (313)
Q Consensus       248 ~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~~  312 (313)
                      ...+++..+..++..|+ .|+++..++..+-|+++-+..+...|++|..-.+++++++||+++..
T Consensus       203 ~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~  266 (293)
T COG2962         203 LQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSD  266 (293)
T ss_pred             hhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence            11123345666677776 78999999999999999999999999999999999999999999853

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.80  E-value=8.3e-18  Score=154.49  Aligned_cols=255  Identities=15%  Similarity=0.116  Sum_probs=184.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHHHH
Q 021354           13 LSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQI   92 (313)
Q Consensus        13 ~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   92 (313)
                      ++..++++++||++++..|.. . +.++.++.  |..++.+++..+.... +++++   ..++.+..-...|+.-...+.
T Consensus         3 ~l~~lia~~~wGs~g~~~k~~-~-g~~~~~~~--~~~~g~l~~~~~~~~~-~~~~~---~~~~~~~~g~l~G~~w~ig~~   74 (290)
T TIGR00776         3 ILIALIPALFWGSFVLINVKI-G-GGPYSQTL--GTTFGALILSIAIAIF-VLPEF---WALSIFLVGLLSGAFWALGQI   74 (290)
T ss_pred             hHHHHHHHHHHhhhHHHHhcc-C-CCHHHHHH--HHHHHHHHHHHHHHHH-hCCcc---cccHHHHHHHHHHHHHHhhhh
Confidence            677888999999999999985 3 68888886  7888887776655544 11111   112333333333444466779


Q ss_pred             HHHHHhhccCchhhhhhcc-hhhHHHHHHHHHHhhhcccccccccccc----hhhHHHHHHhHHHHhhhcCCccccCCCC
Q 021354           93 FGYTGIACSSPTLSSAISN-LTPAFTFTLAVLFRMEKLALRTLSTQAK----IIGTMVSISGALVVVLYKGPTIFLGTSP  167 (313)
Q Consensus        93 ~~~~gl~~t~a~~as~i~~-~~P~~~~ll~~~~~~E~~~~~~~~s~~~----~~gi~l~~~G~~ll~~~~g~~~~~~~~~  167 (313)
                      +++.++++++.+.+..+.+ +.|++..+.+.+++|||.+++      +    ++|+++.++|+.++...++++.      
T Consensus        75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~------  142 (290)
T TIGR00776        75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSA------  142 (290)
T ss_pred             hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEecccccc------
Confidence            9999999999999999988 889999999999999999988      8    9999999999877653111000      


Q ss_pred             CCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHH---HHHHHHHHHHhhcCCC
Q 021354          168 SSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNL---FAAVIAVPLCLFAEPD  244 (313)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l---~~~~~~~~~~~~~~~~  244 (313)
                             .      .++..+...|..+.+.++++|+.|.+..|+.  ++ +|...++.+..   ++++...+.. ..+  
T Consensus       143 -------~------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~-~~~--  203 (290)
T TIGR00776       143 -------G------IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGH-ILA--  203 (290)
T ss_pred             -------c------cccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHH-hcc--
Confidence                   0      0000333579999999999999999999875  34 35777555443   3443333222 101  


Q ss_pred             CccccccChhhHHHHHHHHhhhhHHHHHHHHHHhh-ccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          245 LSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLR-LKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       245 ~~~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~-~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                       .++  .+...+..++ .|++ ..+++.+|..+.+ +.+++..+...+++|++++++++++++|+.+.
T Consensus       204 -~~~--~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~  266 (290)
T TIGR00776       204 -KPL--KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTK  266 (290)
T ss_pred             -cch--HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence             112  1222344444 8887 7999999999999 99999999999999999999999999999875

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.80  E-value=1.5e-17  Score=144.50  Aligned_cols=253  Identities=17%  Similarity=0.098  Sum_probs=200.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHHH
Q 021354           12 LLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQ   91 (313)
Q Consensus        12 ~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   91 (313)
                      +++.++.++..-=....+.|..... .+|...+++|..++++++.++.+-     ++ ++..++++..+...|..-...|
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RP-----wr-~r~~~~~~~~~~~yGvsLg~MN   85 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRP-----WR-RRLSKPQRLALLAYGVSLGGMN   85 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhH-----HH-hccChhhhHHHHHHHHHHHHHH
Confidence            6777777777666667788887765 999999999999999999887432     22 3456788888888888877788


Q ss_pred             HHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCCCC
Q 021354           92 IFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTH  171 (313)
Q Consensus        92 ~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~~~  171 (313)
                      .+||.+++..|-+.+..+=.+-|+.+.+++    .+|  .+      ..+.+.+++.|+.++.- .++            
T Consensus        86 l~FY~si~riPlGiAVAiEF~GPL~vA~~~----sRr--~~------d~vwvaLAvlGi~lL~p-~~~------------  140 (292)
T COG5006          86 LLFYLSIERIPLGIAVAIEFTGPLAVALLS----SRR--LR------DFVWVALAVLGIWLLLP-LGQ------------  140 (292)
T ss_pred             HHHHHHHHhccchhhhhhhhccHHHHHHHh----ccc--hh------hHHHHHHHHHHHHhhee-ccC------------
Confidence            999999999999999999999999888764    111  12      56777888899887663 111            


Q ss_pred             CCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 021354          172 STNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLK  251 (313)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~  251 (313)
                                 +.++....|..+++.+..||+.|++..||.-+..+ ..+-+...+.++++..+|+.....+ +.-+++ 
T Consensus       141 -----------~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag-~~l~~p-  206 (292)
T COG5006         141 -----------SVWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAG-PALFSP-  206 (292)
T ss_pred             -----------CcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcc-hhhcCh-
Confidence                       11233479999999999999999999999765544 3677888999999999999875432 221221 


Q ss_pred             ChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCccccC
Q 021354          252 PDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG  312 (313)
Q Consensus       252 ~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~~  312 (313)
                        .-...-+..|+++|++.|.+=.-+++|.+...-+..+.+||.++.+.|++++||.+|+.
T Consensus       207 --~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~  265 (292)
T COG5006         207 --SLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI  265 (292)
T ss_pred             --HHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH
Confidence              23455567899999999999999999999999999999999999999999999999863

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.66  E-value=4.7e-17  Score=142.36  Aligned_cols=271  Identities=17%  Similarity=0.187  Sum_probs=190.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHH
Q 021354           10 ALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVL   89 (313)
Q Consensus        10 ~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   89 (313)
                      .+...++.++ ..+.+..++.+..+  +.+|.+....|+..-.++-.|....+ ..... .+-.+  .+.+++.|+.|+.
T Consensus        37 ~~gl~l~~vs-~ff~~~~vv~t~~~--e~~p~e~a~~r~l~~mlit~pcliy~-~~~v~-gp~g~--R~~LiLRg~mG~t  109 (346)
T KOG4510|consen   37 NLGLLLLTVS-YFFNSCMVVSTKVL--ENDPMELASFRLLVRMLITYPCLIYY-MQPVI-GPEGK--RKWLILRGFMGFT  109 (346)
T ss_pred             ccCceehhhH-HHHhhHHHhhhhhh--ccChhHhhhhhhhhehhhhheEEEEE-eeeee-cCCCc--EEEEEeehhhhhh
Confidence            3344455555 55555555555554  36999999999888777777766554 11111 11122  2346678899977


Q ss_pred             HHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCC
Q 021354           90 SQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSS  169 (313)
Q Consensus        90 ~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~  169 (313)
                      .....|++++|.+-+.|++|..+.|++|.+++|.++|||.++.      ...|..+.+.|+++++.   +.+-+..+.++
T Consensus       110 gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIvR---PpFlFG~~t~g  180 (346)
T KOG4510|consen  110 GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIVR---PPFLFGDTTEG  180 (346)
T ss_pred             HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEec---CCcccCCCccc
Confidence            8888899999999999999999999999999999999999888      99999999999998874   33322111101


Q ss_pred             CCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 021354          170 THSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWR  249 (313)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~  249 (313)
                      .   +       ++.......|...++.+++.-|.-.++.|+.-|+... ....++..+++.+..++.....+    .++
T Consensus       181 ~---~-------~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~-~msvsyf~~i~lV~s~I~~~~ig----~~~  245 (346)
T KOG4510|consen  181 E---D-------SSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHA-IMSVSYFSLITLVVSLIGCASIG----AVQ  245 (346)
T ss_pred             c---c-------cccccccCCchHHHHHhHhhhhhHHHHHHHhhccccE-EEEehHHHHHHHHHHHHHHhhcc----cee
Confidence            0   0       1111122456777777777777666777777666543 44455666666666655443222    222


Q ss_pred             cc-ChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCccccC
Q 021354          250 LK-PDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG  312 (313)
Q Consensus       250 ~~-~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~~  312 (313)
                      .+ -..+|+.++.+|++ +.++..+.+.++++..+..+++..+..-++|.++.++++||.+|+-
T Consensus       246 lP~cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~w  308 (346)
T KOG4510|consen  246 LPHCGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIW  308 (346)
T ss_pred             cCccccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHH
Confidence            21 23457777788884 4678888999999999999999999999999999999999999874

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.51  E-value=9e-14  Score=110.49  Aligned_cols=124  Identities=22%  Similarity=0.342  Sum_probs=106.2

Q ss_pred             HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHH-HHHHHHHHHHhh
Q 021354           21 CTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-VLSQIFGYTGIA   99 (313)
Q Consensus        21 ~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~gl~   99 (313)
                      ++||.+.++.|...++ +||....++|+..+++ +.+..... +++.. .+.+.+++......|.++ ...+.+++.|++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLIL-GRKPF-KNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhh-ccccc-cCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            4699999999998765 9999999999999997 55555444 33222 345667777888888886 889999999999


Q ss_pred             ccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHh
Q 021354          100 CSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVV  154 (313)
Q Consensus       100 ~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~  154 (313)
                      +++++.++.+.++.|+++.++++++++|+++++      +++|+++.+.|++++.
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999      9999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.49  E-value=2.6e-13  Score=124.24  Aligned_cols=201  Identities=18%  Similarity=0.307  Sum_probs=152.1

Q ss_pred             HHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCC
Q 021354           86 IGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGT  165 (313)
Q Consensus        86 ~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~  165 (313)
                      +=+..+.++..++.+|+++..+++.++.-+||.+++..+..||+++.      |.+++++++.|++++...+.++.    
T Consensus       168 lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~~~----  237 (416)
T KOG2765|consen  168 LWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSKQN----  237 (416)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEecccccc----
Confidence            33778899999999999999999999999999999999999999999      99999999999988775322110    


Q ss_pred             CCCCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcC---hhHHHHHHHHHHHHHHHHHHHhhcC
Q 021354          166 SPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYP---AELLVAFLYNLFAAVIAVPLCLFAE  242 (313)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~---~~~~~t~~~~l~~~~~~~~~~~~~~  242 (313)
                                +     +..+.+...|+++++++++.||+|+++.||...+..   |-...-.+..++..+.+-|..++.+
T Consensus       238 ----------~-----~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~  302 (416)
T KOG2765|consen  238 ----------S-----DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILD  302 (416)
T ss_pred             ----------c-----cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHH
Confidence                      0     112344579999999999999999999998765542   2122223333444444444443321


Q ss_pred             C-CCccccccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          243 P-DLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       243 ~-~~~~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      . ..+.++.+.......+++.+.+++.++.++|.++.--.+|..+.+-+.++-..|++.+.++=|.++++
T Consensus       303 ~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~  372 (416)
T KOG2765|consen  303 FFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSA  372 (416)
T ss_pred             HhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCH
Confidence            1 12233443434455677889999999999999999999999999999999999999999987776653

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.48  E-value=4.3e-13  Score=105.27  Aligned_cols=135  Identities=16%  Similarity=0.134  Sum_probs=118.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHHH
Q 021354           12 LLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQ   91 (313)
Q Consensus        12 ~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   91 (313)
                      ...+.+++++.||....+.|++++ ++||......|-.....++..+.... ++.......+.|.+..+.+-|+.+....
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~-g~~~~~~~~~~k~~lflilSGla~glsw   81 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVT-GNWQAGGEIGPKSWLFLILSGLAGGLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhc-CceecccccCcceehhhhHHHHHHHHHH
Confidence            467788899999999999999987 59999999999999998888887765 4333222346677888888888889999


Q ss_pred             HHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHh
Q 021354           92 IFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVV  154 (313)
Q Consensus        92 ~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~  154 (313)
                      .+||.+++...++...-+-.+.|+++.++++++++||++.+      +|+|+.+..+|++++.
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs  138 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence            99999999999999999999999999999999999999999      9999999999998754

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.43  E-value=7.6e-11  Score=109.01  Aligned_cols=257  Identities=14%  Similarity=0.161  Sum_probs=186.0

Q ss_pred             HHHHHHHHHhC-CCC--HHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 021354           26 LNTLFKAAASK-GLS--YYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSS  102 (313)
Q Consensus        26 ~~~~~K~~l~~-~~~--p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~gl~~t~  102 (313)
                      +....+..... ...  |..+++..+....+.-.+..... + +..   .++..+.+.+..++.....+.+-..+++|.|
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~-~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~   89 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLF-K-FPK---SRKIPLKKYAILSFLFFLASVLSNAALKYIS   89 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhc-c-ccC---CCcChHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            33444444433 244  88999999998887766655443 2 111   1223345567778888889999999999999


Q ss_pred             chhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCCCCCCCccccccCC
Q 021354          103 PTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGS  182 (313)
Q Consensus       103 a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  182 (313)
                      ...-.++-...|+.+.+++.+++|+|.+++      ++.++++..+|+.+....+..+-     +       ..     .
T Consensus        90 ~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~-----~-------~~-----~  146 (303)
T PF08449_consen   90 YPTQIVFKSSKPIPVMILGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSS-----S-------SS-----N  146 (303)
T ss_pred             hHHHHHHhhhHHHHHHHHHHHhcCccccHH------HHHHHHHHHhhHheeeecccccc-----c-------cc-----c
Confidence            998899999999999999999999999999      99999999999987664211110     0       00     1


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHHHHHHhh--cCCCCc--cccccChhhHH
Q 021354          183 PSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYP-AELLVAFLYNLFAAVIAVPLCLF--AEPDLS--LWRLKPDVALV  257 (313)
Q Consensus       183 ~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~-~~~~~t~~~~l~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~  257 (313)
                      ..+.++..|+.+++.+.++.+...+.+++..++++ ++.+..++..+++.+...+....  .++..+  ++....+..+.
T Consensus       147 ~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~  226 (303)
T PF08449_consen  147 SSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLL  226 (303)
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHH
Confidence            11122345999999999999999999999876554 45788999999999988887766  222111  11111223344


Q ss_pred             HHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          258 SIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       258 ~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      .++...+ ...++....++.+++.|+...++...+--+++++++++++|+++++
T Consensus       227 ~l~~~s~-~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~  279 (303)
T PF08449_consen  227 YLLLFSL-TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSP  279 (303)
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCCh
Confidence            4444444 4455666667889999999999999999999999999999999886

; GO: 0055085 transmembrane transport

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.20  E-value=2.9e-09  Score=95.40  Aligned_cols=221  Identities=14%  Similarity=0.203  Sum_probs=154.4

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHH
Q 021354           73 KFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALV  152 (313)
Q Consensus        73 ~~~~~~~~~~~g~~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~l  152 (313)
                      .+++..+..+-+++....+.+.+.++++.+|+.-.++.++-.++|++++++++|+|++++      ||+++.+-++|+.+
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~l   86 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVVL   86 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHhe
Confidence            457778888999999889999999999999999999999999999999999999999999      99999999999887


Q ss_pred             HhhhcCCccccCCCCCCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChh-HHHHHHHHHHHH
Q 021354          153 VVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAE-LLVAFLYNLFAA  231 (313)
Q Consensus       153 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~-~~~t~~~~l~~~  231 (313)
                      +-.. + ...   ++.+.++..++     ...+.+...|.++.+.++++-++..++..+..|+.+.+ ..-.....++|.
T Consensus        87 v~~~-~-~~~---~~~~~~~~~~~-----~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi  156 (244)
T PF04142_consen   87 VQLS-S-SQS---SDNSSSSSVHH-----DASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGI  156 (244)
T ss_pred             eecC-C-ccc---ccccccccccc-----ccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Confidence            5531 1 110   00000000000     11133457899999999999999999999988775422 333333455555


Q ss_pred             HHHHHHHhhcCCC-CccccccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCccc
Q 021354          232 VIAVPLCLFAEPD-LSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLH  310 (313)
Q Consensus       232 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~  310 (313)
                      +..++.....+.+ ..+...  -+.+-...+.-++..+++-.+....+|+.+...=+....++-+.+.+.++.++|.+++
T Consensus       157 ~~~~~~~~~~~~~~~~~~g~--f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s  234 (244)
T PF04142_consen  157 LFNLLALLLSDGSAISESGF--FHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPS  234 (244)
T ss_pred             HHHHHHHhcccccccccCCc--hhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence            5555444333322 111110  0112222333444556666677788899888887788888999999999999999988


Q ss_pred             c
Q 021354          311 L  311 (313)
Q Consensus       311 ~  311 (313)
                      .
T Consensus       235 ~  235 (244)
T PF04142_consen  235 L  235 (244)
T ss_pred             h
Confidence            5

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.19  E-value=5.7e-11  Score=93.87  Aligned_cols=104  Identities=23%  Similarity=0.379  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHHHhhhhhhcCCCcc-CCCccHHHHHHHHHHHHHH-HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHH
Q 021354           44 VAYSYPLATLALLPLPLIFRNTTTV-VPSFKFSILSRIILLSFIG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLA  121 (313)
Q Consensus        44 ~~~R~~~a~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~-~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~  121 (313)
                      +.+|+..+.+++..+...+ ++.+. .+..+++.+......|+++ ..++.++++|+++++ +.++.+.++.|+++.+++
T Consensus         1 aa~r~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~   78 (113)
T PF13536_consen    1 AAFRYLFSVLFLLIILLIR-GRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLS   78 (113)
T ss_pred             CHHHHHHHHHHHHHHHHHH-ccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHH
Confidence            3689999999988887765 33211 0122334455666778887 589999999999999 588899999999999999


Q ss_pred             HHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354          122 VLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus       122 ~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      ++++|||++++      ++.|++++++|+.++..
T Consensus        79 ~~~~~er~~~~------~~~a~~l~~~Gv~li~~  106 (113)
T PF13536_consen   79 WLFFKERLSPR------RWLAILLILIGVILIAW  106 (113)
T ss_pred             HHHhcCCCCHH------HHHHHHHHHHHHHHHhh
Confidence            99999999999      99999999999998875

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.19  E-value=5.8e-10  Score=100.29  Aligned_cols=132  Identities=19%  Similarity=0.255  Sum_probs=110.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHH
Q 021354            8 REALLLSATVAVECTTVGLNTLFKAAASKGLS--YYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSF   85 (313)
Q Consensus         8 ~~~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~--p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   85 (313)
                      .+.++....+++++.|+......|...+ +.+  +.....+|+.++.+++.+..... ++..   ..+.+++......++
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~---~~~~~~~~~~~~~~~  199 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVK-KEGPELLQFTGWVLLLGALLLLPFAWFL-GPNP---QALSLQWGALLYLGL  199 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHhc-CCCC---CcchHHHHHHHHHHH
Confidence            4456888999999999999999999865 366  44566688999999998887664 3222   235567767778888


Q ss_pred             HH-HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhH
Q 021354           86 IG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGA  150 (313)
Q Consensus        86 ~~-~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~  150 (313)
                      ++ ...+.++++++++.+++.++.+.++.|+++.++++++++||++.+      +++|..+.+.|+
T Consensus       200 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~  259 (260)
T TIGR00950       200 IGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhc
Confidence            87 789999999999999999999999999999999999999999999      999999998886

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.09  E-value=2.3e-10  Score=90.73  Aligned_cols=108  Identities=21%  Similarity=0.370  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCCCccccccChhhHHHHHHHHhhhhHHHHHHHHHHhh
Q 021354          200 FLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLR  279 (313)
Q Consensus       200 ~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~  279 (313)
                      ++|+.+.+..|+..++.+ +...++++++.+++ +.+...+.+...  ....+...+...++.+++++.+++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            478999999999988875 69999999999998 666665554322  11122345677888899889999999999999


Q ss_pred             ccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          280 LKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       280 ~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      +.++++++.+.+++|+++.++++++++|+++.
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~  108 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSW  108 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence            99999999999999999999999999999985

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.06  E-value=1.1e-10  Score=102.05  Aligned_cols=256  Identities=20%  Similarity=0.190  Sum_probs=178.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHHHHH
Q 021354           15 ATVAVECTTVGLNTLFKAAASKGL-SYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIF   93 (313)
Q Consensus        15 ~l~~~~~~~g~~~~~~K~~l~~~~-~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   93 (313)
                      .-++..++-+.++.-..++ ..++ .|..-.++-+..-+++-.|...+|  ++.  .+..   +...+++++...-.+++
T Consensus        23 GQiLSL~~t~~a~tss~la-~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR--~~~--~~~~---~~hYilla~~DVEaNy~   94 (336)
T KOG2766|consen   23 GQILSLLITSTAFTSSELA-RKGINAPTSQTFLNYVLLALVYGPIMLFR--RKY--IKAK---WRHYILLAFVDVEANYF   94 (336)
T ss_pred             HHHHHHHHHcchhhhHHHH-hccCCCccHHHHHHHHHHHHHHhhHHHhh--hHH--HHHH---HHHhhheeEEeecccEE
Confidence            4455556666666666655 3333 467778888888888888888775  211  1222   33467788888888889


Q ss_pred             HHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCCCCCC
Q 021354           94 GYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHST  173 (313)
Q Consensus        94 ~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~~~~~  173 (313)
                      ...|.|||+-+....+-.-.-..+.+++|+++|.|.++.      |+.|+++|+.|+.+++..            +.|..
T Consensus        95 vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~s------------DV~ag  156 (336)
T KOG2766|consen   95 VVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFS------------DVHAG  156 (336)
T ss_pred             EeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEe------------eeccc
Confidence            999999999877776654333356778999999999999      999999999999887751            12221


Q ss_pred             CccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCC-CCccccccC
Q 021354          174 NSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEP-DLSLWRLKP  252 (313)
Q Consensus       174 ~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~  252 (313)
                      ++       .++++-..||.+.++++-+||+.++......|+.+ ..+.+....++|+++..+- .+.+. +...  ..+
T Consensus       157 d~-------aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d-~~elm~~lgLfGaIIsaIQ-~i~~~~~~~t--l~w  225 (336)
T KOG2766|consen  157 DR-------AGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNAD-RVELMGFLGLFGAIISAIQ-FIFERHHVST--LHW  225 (336)
T ss_pred             cc-------cCCCCCccCcEEEEecceeeeeccccHHHHHhcCc-HHHHHHHHHHHHHHHHHHH-Hhhhccceee--Eee
Confidence            11       13556689999999999999999999999999986 4888888899999988876 44443 2222  222


Q ss_pred             hhhHHHHHHHH-hhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          253 DVALVSIVYSA-FLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       253 ~~~~~~ll~lg-v~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      +...  ..|++ .++..+-|.+--..+|..+++...+-...+-.+++++  ..+|-+++|
T Consensus       226 ~~~i--~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~w  281 (336)
T KOG2766|consen  226 DSAI--FLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDW  281 (336)
T ss_pred             hHHH--HHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhh
Confidence            2222  22333 2333444445556678999999999888899999887  445554544

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=98.99  E-value=1.7e-09  Score=99.59  Aligned_cols=246  Identities=11%  Similarity=0.137  Sum_probs=175.7

Q ss_pred             HHHHHHh--CCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhh
Q 021354           29 LFKAAAS--KGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLS  106 (313)
Q Consensus        29 ~~K~~l~--~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~gl~~t~a~~a  106 (313)
                      ..|..++  .---|..+...++..+.+..+.....+ -.+.. +..++..+..++.+|++.....++-..++.|.+.+..
T Consensus        35 ~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~-~~~~~-~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~  112 (316)
T KOG1441|consen   35 LNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLK-LVPPS-KISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFY  112 (316)
T ss_pred             eeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhc-CCCCC-ccccccchHHHHHHHHHHHHHHHhcchhhhccchhHH
Confidence            3677776  324577788888888877666654443 22211 1113355667888898888889999999999999999


Q ss_pred             hhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCCCCCCCccccccCCCCCC
Q 021354          107 SAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVS  186 (313)
Q Consensus       107 s~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (313)
                      -.+=+++|.++.++++++.+|+.+++      .+..++..+.|+.+-..                          .+.+.
T Consensus       113 q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~--------------------------~e~~f  160 (316)
T KOG1441|consen  113 QTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASV--------------------------TELSF  160 (316)
T ss_pred             HHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeee--------------------------ccccc
Confidence            99999999999999999999999998      78888887778764332                          11123


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHh----hcChhHHHHHHHHHHHHHHHH-HHHhhcCCCCcc-ccc-cChhhHHHH
Q 021354          187 NWVTGGFLLAAQCFLLSIWSILLTQIIN----IYPAELLVAFLYNLFAAVIAV-PLCLFAEPDLSL-WRL-KPDVALVSI  259 (313)
Q Consensus       187 ~~~~G~ll~l~aa~~~a~~~v~~k~~~~----~~~~~~~~t~~~~l~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~l  259 (313)
                      + ..|.+.++++.+..+..++++|+..+    +. ++.....++.-++.+.++ |.....|++... +.. +++......
T Consensus       161 n-~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~-~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~  238 (316)
T KOG1441|consen  161 N-LFGFISAMISNLAFALRNILSKKLLTSKGESL-NSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLIL  238 (316)
T ss_pred             c-HHHHHHHHHHHHHHHHHHHHHHHhhhcccccc-CchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHH
Confidence            3 58999999999999999999999763    23 457888888888888888 777666553220 000 111222333


Q ss_pred             HHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          260 VYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       260 l~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      ++..+ .........++.+.+.+|..-+..+.+--++.++.++++++|++++
T Consensus       239 ~~~sv-~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~  289 (316)
T KOG1441|consen  239 LLNSV-LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTF  289 (316)
T ss_pred             HHHHH-HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCch
Confidence            44443 2233345667888999999988888888888888888888887653

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.91  E-value=6.4e-07  Score=81.39  Aligned_cols=261  Identities=14%  Similarity=0.160  Sum_probs=183.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHH-HHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHH
Q 021354           13 LSATVAVECTTVGLNTLFKAAASK-GLSYYVF-VAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLS   90 (313)
Q Consensus        13 ~l~l~~~~~~~g~~~~~~K~~l~~-~~~p~~~-~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   90 (313)
                      ....+.-...=-.+-+.-|.++.+ +.|.... ..++.+...+++...-..+ --+.  ++++++..++.+...++..+.
T Consensus        14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~-lv~~--~~l~~~~~kk~~P~~~lf~~~   90 (314)
T KOG1444|consen   14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLG-LVNF--RPLDLRTAKKWFPVSLLFVGM   90 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhc-eeec--CCcChHHHHHHccHHHHHHHH
Confidence            333333333333445567887765 3444333 3477777666655543221 1122  467788888888889888888


Q ss_pred             HHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCCC
Q 021354           91 QIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSST  170 (313)
Q Consensus        91 ~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~~  170 (313)
                      ...-..+++|.+...-+++=+..|+++++...++++.+.+++      .|.++....+|......   +           
T Consensus        91 i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~---~-----------  150 (314)
T KOG1444|consen   91 LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAF---T-----------  150 (314)
T ss_pred             HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhcc---c-----------
Confidence            888889999999999999999999999999999999777777      88898888888765332   0           


Q ss_pred             CCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHHHHHHhhcCC-C----
Q 021354          171 HSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYP-AELLVAFLYNLFAAVIAVPLCLFAEP-D----  244 (313)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~-~~~~~t~~~~l~~~~~~~~~~~~~~~-~----  244 (313)
                                   +-+-...|..+++.+.++-+.+.+..|+..+..+ ......++.++.+...+.....++++ +    
T Consensus       151 -------------d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~  217 (314)
T KOG1444|consen  151 -------------DLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSL  217 (314)
T ss_pred             -------------cceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHh
Confidence                         0111235899999999999999999998754321 23678889999999988888877654 1    


Q ss_pred             -CccccccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCccccC
Q 021354          245 -LSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG  312 (313)
Q Consensus       245 -~~~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~~  312 (313)
                       .+.|..  ...+..+...++++-++.|. -.++.+..+++..+++....-....+-+....|++.++.
T Consensus       218 ~~~~~~~--~~~~~~~~lScv~gf~isy~-s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~  283 (314)
T KOG1444|consen  218 NFDNWSD--SSVLVVMLLSCVMGFGISYT-SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL  283 (314)
T ss_pred             hcccccc--hhHHHHHHHHHHHHHHHHHH-HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh
Confidence             111211  12356677888888888887 568899999999999995555666666666667777653

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.90  E-value=3.6e-08  Score=77.76  Aligned_cols=118  Identities=12%  Similarity=0.102  Sum_probs=98.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCCCccccccChhhHHHHHHHHhhhhHHHH
Q 021354          192 GFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNT  271 (313)
Q Consensus       192 ~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~lgv~~s~~~~  271 (313)
                      ..+++++++.+++-.+..|--.++.+ |...|....++..+.+.......++.... ....+..|..++..|+ +++++.
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~-~~~~~k~~lflilSGl-a~glsw   81 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAG-GEIGPKSWLFLILSGL-AGGLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecc-cccCcceehhhhHHHH-HHHHHH
Confidence            46899999999999999998888774 68889999988888887777665432111 1123456888888884 889999


Q ss_pred             HHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCccccC
Q 021354          272 IIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG  312 (313)
Q Consensus       272 ~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~~  312 (313)
                      .+|++++++..+++|....-.+|+++++++++++||++|..
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~  122 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP  122 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH
Confidence            99999999999999999999999999999999999999863

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.86  E-value=1e-07  Score=87.71  Aligned_cols=134  Identities=13%  Similarity=0.097  Sum_probs=106.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHH-H
Q 021354           10 ALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-V   88 (313)
Q Consensus        10 ~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~   88 (313)
                      ..+.+..+++++.|+...+..|...+ +.+|....... .++++++.++.... +. .  ...+...+...+..|++. .
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~-~~~~~~~~~~~-~~~~~~l~~~~~~~-~~-~--~~~~~~~~~~~l~lgv~~t~  220 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGA-EHGPATVAIGS-LIAALIFVPIGALQ-AG-E--ALWHWSILPLGLAVAILSTA  220 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHHHH-HHHHHHHHHHHHHc-cC-c--ccCCHHHHHHHHHHHHHHHH
Confidence            34678899999999999999998744 57887775544 55666677766543 22 1  122344444456788887 7


Q ss_pred             HHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           89 LSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        89 ~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      ..+.++++++++.+++.++.+.+++|++..++++++++|+++..      +++|.++.+.|++....
T Consensus       221 ~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        221 LPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTL  281 (293)
T ss_pred             HHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence            78889999999999999999999999999999999999999999      99999999999887664

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.85  E-value=9.1e-08  Score=87.97  Aligned_cols=137  Identities=12%  Similarity=0.010  Sum_probs=111.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHH-
Q 021354            9 EALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-   87 (313)
Q Consensus         9 ~~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-   87 (313)
                      +..+.+..+++++.|+......|.. +. -++.....+++..+++++.+..... +.... ...+.+.+......++++ 
T Consensus       148 ~~~G~l~~l~a~~~~a~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~i~~l~i~~s  223 (292)
T PRK11272        148 NPWGAILILIASASWAFGSVWSSRL-PL-PVGMMAGAAEMLAAGVVLLIASLLS-GERLT-ALPTLSGFLALGYLAVFGS  223 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhc-CC-CcchHHHHHHHHHHHHHHHHHHHHc-CCccc-ccCCHHHHHHHHHHHHHHH
Confidence            3457788889999999999999984 33 3456677889999988888776544 32211 112346677777888887 


Q ss_pred             HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           88 VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        88 ~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      ...+.++++++++.++++++.+.++.|+++.++++++++|+++..      +++|.++.+.|++++..
T Consensus       224 ~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        224 IIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHHH
Confidence            788899999999999999999999999999999999999999999      99999999999987664

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=98.81  E-value=6.1e-06  Score=76.13  Aligned_cols=277  Identities=13%  Similarity=0.126  Sum_probs=178.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHhhhhhhcCCC---ccCCC------ccHHHHH
Q 021354           11 LLLSATVAVECTTVGLNTLFKAAASKG---LSYYVFVAYSYPLATLALLPLPLIFRNTT---TVVPS------FKFSILS   78 (313)
Q Consensus        11 ~~~l~l~~~~~~~g~~~~~~K~~l~~~---~~p~~~~~~R~~~a~~~l~~~~~~~~~~~---~~~~~------~~~~~~~   78 (313)
                      .-++.++...+.+++..+..|.+-..+   +.|...++.--.+-.++......+. +|+   +..+.      ..+++..
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~-~~~~~~~~~~~l~~~i~~~~~~~l   93 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFE-ERKYAKKSLKSLSKEILAAPRETL   93 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHH-hhHHhhhhhhhcCHHHHhChHHHH
Confidence            446788888999999999999986555   6677777777777666655555443 221   11011      2234666


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcC
Q 021354           79 RIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKG  158 (313)
Q Consensus        79 ~~~~~g~~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g  158 (313)
                      +..+-+++.+..+-+++.++.+.+|+.-.+..++--+.|+++..+++++|++++      ||.++++..+|+.++-....
T Consensus        94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCC
Confidence            777888888777779999999999999999999999999999999999999999      99999999999987552111


Q ss_pred             CccccCCCCCCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHH-HHHHHHHHHHH
Q 021354          159 PTIFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLY-NLFAAVIAVPL  237 (313)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~-~l~~~~~~~~~  237 (313)
                      ...       +-         .+...+.+...|....+.++++-+.-.+...+..|+-+.+.-+--.+ .++|.+.....
T Consensus       168 ~~~-------~a---------~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~  231 (345)
T KOG2234|consen  168 SPT-------GA---------KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLT  231 (345)
T ss_pred             CCC-------Cc---------cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Confidence            100       00         00112345578999999999999999999888887654322222222 23333333333


Q ss_pred             HhhcCCCCccccccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          238 CLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      .+..+.....|.- .-..+-...+.-++..+++-.+-...+|+.+--.=+-...+.-+++.+.++.++|-++|.
T Consensus       232 ~~~~d~~~i~~~g-ff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~  304 (345)
T KOG2234|consen  232 ILLQDGEAINEYG-FFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTL  304 (345)
T ss_pred             HhhccccccccCC-ccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchH
Confidence            3332221111110 011222333333444455555566666666655444455577788888888888877763

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.74  E-value=3.7e-07  Score=86.33  Aligned_cols=138  Identities=12%  Similarity=0.094  Sum_probs=101.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHHHHhhhhhhcCCCc---cCCCccHHHHHHHHHHHHHH
Q 021354           12 LLSATVAVECTTVGLNTLFKAAASKGLSY-YVFVAYSYPLATLALLPLPLIFRNTTT---VVPSFKFSILSRIILLSFIG   87 (313)
Q Consensus        12 ~~l~l~~~~~~~g~~~~~~K~~l~~~~~p-~~~~~~R~~~a~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~   87 (313)
                      +.+.++++++.|+...++.|....+ .|| ....++....+++.+.+..... ++..   +....+.. ....+..++..
T Consensus       190 G~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~-~~~i~y~~i~t  266 (358)
T PLN00411        190 GGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVV-EKNNPSVWIIHFDIT-LITIVTMAIIT  266 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHH-ccCCcccceeccchH-HHHHHHHHHHH
Confidence            5577888999999999999987654 544 5667777776666555444443 2211   10111222 22233344433


Q ss_pred             HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcC
Q 021354           88 VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKG  158 (313)
Q Consensus        88 ~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g  158 (313)
                      .+.+.++.+++++.+|+.++.+.++.|+++.++++++++|+++..      +++|.++.+.|+++....++
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~~~~  331 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMWGKA  331 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhhhh
Confidence            567788999999999999999999999999999999999999999      99999999999988775433

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.73  E-value=2.6e-07  Score=85.07  Aligned_cols=132  Identities=18%  Similarity=0.156  Sum_probs=101.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHH
Q 021354           11 LLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLS   90 (313)
Q Consensus        11 ~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   90 (313)
                      .+.++.++++++|+...+..|... ++.+|.....   ..+.+.+.+..... +.. . ...+.+.+..++..|+.....
T Consensus       156 ~G~~~~l~aa~~~A~~~v~~k~~~-~~~~~~~~~~---~~~~~~l~~~~~~~-~~~-~-~~~~~~~~~~l~~~~~~t~~~  228 (295)
T PRK11689        156 LSYGLAFIGAFIWAAYCNVTRKYA-RGKNGITLFF---ILTALALWIKYFLS-PQP-A-MVFSLPAIIKLLLAAAAMGFG  228 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcc-CCCCchhHHH---HHHHHHHHHHHHHh-cCc-c-ccCCHHHHHHHHHHHHHHHHH
Confidence            467889999999999999999964 4578765432   33344444433333 221 1 224456666666666544778


Q ss_pred             HHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           91 QIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        91 ~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      +.++++++++.+++.++.+.++.|++..++++++++|+++..      +++|.++.+.|+++...
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHhh
Confidence            999999999999999999999999999999999999999999      99999999999876553

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=98.67  E-value=2.7e-06  Score=76.75  Aligned_cols=270  Identities=15%  Similarity=0.153  Sum_probs=165.8

Q ss_pred             cchhhhhhHHHHHHHHHHH--HHHHHHHHHHHHHhCCCCHHHHHHHHH----HHHHHHHHhhhhhhcCCCccCCCccHHH
Q 021354            3 RRKFFREALLLSATVAVEC--TTVGLNTLFKAAASKGLSYYVFVAYSY----PLATLALLPLPLIFRNTTTVVPSFKFSI   76 (313)
Q Consensus         3 ~~~~~~~~~~~l~l~~~~~--~~g~~~~~~K~~l~~~~~p~~~~~~R~----~~a~~~l~~~~~~~~~~~~~~~~~~~~~   76 (313)
                      |.+++.++-..++++...-  -.|..|...+.-.+-++ |..++.+..    ++|++.....  .+ .+++.+-..++++
T Consensus         7 ~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~f-PLf~ts~h~~v~flfa~~~~~l~--~~-~~~r~r~~~sw~~   82 (349)
T KOG1443|consen    7 DNQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTKNFHF-PLFVTSLHLAVKFLFAALSRRLY--QC-SVPRARVVLSWRD   82 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCC-chHHHHHHHHHHHHHHHHHHHHH--hc-cCCccccCCcHHH
Confidence            3455666666666665433  33445555555433333 455555544    4444433222  11 1111102345544


Q ss_pred             -HHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           77 -LSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        77 -~~~~~~~g~~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                       +.++..+|+..+..-.+-.++++|++.+.=+..=+..++|+.+++.++.-||.++.      -..-+.+..+|+.+++.
T Consensus        83 ~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~------L~l~v~lI~~Glflft~  156 (349)
T KOG1443|consen   83 YLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTY  156 (349)
T ss_pred             HHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEe
Confidence             55677888887888888889999999887777777899999999999999999887      55555555566655443


Q ss_pred             hcCCccccCCCCCCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcC----hhHHHHHHHHHHHH
Q 021354          156 YKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYP----AELLVAFLYNLFAA  231 (313)
Q Consensus       156 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~----~~~~~t~~~~l~~~  231 (313)
                       |..                         +. ...|..+.++++++-++-=...+...++.+    .|........-...
T Consensus       157 -KsT-------------------------qf-~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~  209 (349)
T KOG1443|consen  157 -KST-------------------------QF-NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMS  209 (349)
T ss_pred             -ccc-------------------------ce-eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHH
Confidence             221                         11 257888888888887766555555544433    35555565566666


Q ss_pred             HHHHHHHhhcCCC-Cc----cccc-cChhhHHHHHHHHhhhhHHHHH---HHHHHhhccCceeeecccchHHHHHHHHHH
Q 021354          232 VIAVPLCLFAEPD-LS----LWRL-KPDVALVSIVYSAFLGPSFNTI---IHTWGLRLKGPVYIAIFKPLSVVIAAITGI  302 (313)
Q Consensus       232 ~~~~~~~~~~~~~-~~----~~~~-~~~~~~~~ll~lgv~~s~~~~~---l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~  302 (313)
                      +.++|..+.+|+. ..    .+.. ++...+..+.+.+. +...++.   .=+....+.+.-..|++.-..-+...++|.
T Consensus       210 ~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~  288 (349)
T KOG1443|consen  210 IGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAI  288 (349)
T ss_pred             HHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHH
Confidence            7777777777763 11    1221 12122222222222 2223332   234456788888899999999999999999


Q ss_pred             HHhcCccc
Q 021354          303 IFLGDTLH  310 (313)
Q Consensus       303 ~~l~E~l~  310 (313)
                      ++.+|.++
T Consensus       289 ii~~d~ls  296 (349)
T KOG1443|consen  289 IILKDQLS  296 (349)
T ss_pred             HHhhcchh
Confidence            99999876

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.63  E-value=4e-07  Score=83.20  Aligned_cols=133  Identities=16%  Similarity=0.110  Sum_probs=91.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHH
Q 021354           10 ALLLSATVAVECTTVGLNTLFKAAASKGLSYY----VFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSF   85 (313)
Q Consensus        10 ~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~----~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   85 (313)
                      .++.+..+++++.|+......|... ++.+|.    ....+.+...++.+.+....+ +++.. .. ...........+.
T Consensus       143 ~~g~~~~l~aal~~a~~~i~~k~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~-~~~~~~~~~~~~~  218 (281)
T TIGR03340       143 RKAYAWALAAALGTAIYSLSDKAAA-LGVPAFYSALGYLGIGFLAMGWPFLLLYLKR-HGRSM-FP-YARQILPSATLGG  218 (281)
T ss_pred             hhHHHHHHHHHHHHHHhhhhccccc-cchhcccccHHHHHHHHHHHHHHHHHHHHHH-hccch-hh-hHHHHHHHHHHHH
Confidence            3456677888899999999888753 234442    233344433322222222222 11111 11 1222334445555


Q ss_pred             HH-HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHH
Q 021354           86 IG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALV  152 (313)
Q Consensus        86 ~~-~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~l  152 (313)
                      +. ...+.++++++++.+++.++.+.++.|++..++++++++|+++..      +++|.++.++|+.+
T Consensus       219 ~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~------~~iG~~lil~Gv~l  280 (281)
T TIGR03340       219 LMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLT------RLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHhHHh
Confidence            55 678899999999999999999999999999999999999999999      99999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.57  E-value=1.7e-06  Score=71.45  Aligned_cols=133  Identities=22%  Similarity=0.333  Sum_probs=110.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCC---c-------cHHH
Q 021354           13 LSATVAVECTTVGLNTLFKAAASK------GLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPS---F-------KFSI   76 (313)
Q Consensus        13 ~l~l~~~~~~~g~~~~~~K~~l~~------~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~---~-------~~~~   76 (313)
                      +...+.+.+.-+...+..|..+++      ..+|.++..+-...+.+++.|.+... |+....+.   .       ..+.
T Consensus         2 ~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    2 FILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLL-EGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHhhhhhhcchHHH
Confidence            466788889999999999998877      68999999999999999999988776 43221000   0       1234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHH
Q 021354           77 LSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALV  152 (313)
Q Consensus        77 ~~~~~~~g~~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~l  152 (313)
                      +..+...|++....+...+.-+++++|...++..+.-.+.+.++++++++|+++.+      ++.|+++++.|.++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence            55566666777889999999999999999999999999999999999999999999      99999999999764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.55  E-value=5.5e-07  Score=83.08  Aligned_cols=140  Identities=16%  Similarity=0.180  Sum_probs=104.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCC-C-------ccHHHHHH
Q 021354            9 EALLLSATVAVECTTVGLNTLFKAAASK-GLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVP-S-------FKFSILSR   79 (313)
Q Consensus         9 ~~~~~l~l~~~~~~~g~~~~~~K~~l~~-~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~-~-------~~~~~~~~   79 (313)
                      +..+.+..+++++.|+...+..|...++ +.||..+..+-...+++.+.|..... +...... .       ........
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  221 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFIT-EGPPFLPHGFMQAISGVNVTKIYT  221 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHH-cchHHHHHHHHHhhcccCchHHHH
Confidence            4457788889999999999999987541 48999999999999999999987654 3211000 0       00011111


Q ss_pred             -HHHHHHHH-HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           80 -IILLSFIG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        80 -~~~~g~~~-~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                       .+..+... ...+.+++.++++++|..+++..++.|+++.++++++++|+++.+      +++|.++.+.|+.+...
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       222 VSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHH
Confidence             22222212 334467778999999999999999999999999999999999999      99999999999987664

specificities overlap.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.54  E-value=1.7e-05  Score=71.45  Aligned_cols=205  Identities=17%  Similarity=0.123  Sum_probs=134.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcc-hhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHH
Q 021354           75 SILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISN-LTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVV  153 (313)
Q Consensus        75 ~~~~~~~~~g~~~~~~~~~~~~gl~~t~a~~as~i~~-~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll  153 (313)
                      +.+...++.|++=...|...+.++++...+.+.=+.. ++=+.+.+.+.++|+|.-+.+.+  -....++++.++|+.+-
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lt  120 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILT  120 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHh
Confidence            6666677777777889999999999999998887765 56667889999999998776521  01234666777777653


Q ss_pred             hhhcCCccccCCCCCCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHH
Q 021354          154 VLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVI  233 (313)
Q Consensus       154 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~  233 (313)
                      .. ++++        +.+          .+++.+...|....+++++.|..|.+..|.  .+. ++.....-|.+-..+.
T Consensus       121 s~-~~~~--------~~~----------~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~-~~~~~~lPqaiGm~i~  178 (269)
T PF06800_consen  121 SY-QDKK--------SDK----------SSSKSNMKKGILALLISTIGYWIYSVIPKA--FHV-SGWSAFLPQAIGMLIG  178 (269)
T ss_pred             cc-cccc--------ccc----------cccccchhhHHHHHHHHHHHHHHHHHHHHh--cCC-ChhHhHHHHHHHHHHH
Confidence            33 1110        000          112345568999999999999999999775  333 3466555554333333


Q ss_pred             HHHHHhhcCCCCccccccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCccc
Q 021354          234 AVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLH  310 (313)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~  310 (313)
                      ...+....++...+ .    ..+..+ ..|++ =.++...+..+.++.|.+..=.+.-+..+++.+.|.++++|+=+
T Consensus       179 a~i~~~~~~~~~~~-k----~~~~ni-l~G~~-w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt  248 (269)
T PF06800_consen  179 AFIFNLFSKKPFFE-K----KSWKNI-LTGLI-WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKT  248 (269)
T ss_pred             HHHHhhcccccccc-c----chHHhh-HHHHH-HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCc
Confidence            33333322211111 1    123322 22332 23566668888999999999999999999999999999999743

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.51  E-value=4.6e-06  Score=76.95  Aligned_cols=138  Identities=17%  Similarity=0.204  Sum_probs=101.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHHHHHhhhhhhcCCCcc----CCCccHHHHHHHHHH
Q 021354           10 ALLLSATVAVECTTVGLNTLFKAAASKGLSY--YVFVAYSYPLATLALLPLPLIFRNTTTV----VPSFKFSILSRIILL   83 (313)
Q Consensus        10 ~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p--~~~~~~R~~~a~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~   83 (313)
                      ..+.++.+.+++.|+...+..|...++.-+|  .....+-...+.+.+....... +....    ....+.+.+..++.+
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLIL-DGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHh-cCchhhhhhhccCCHHHHHHHHHH
Confidence            3577888999999999999999864332122  2333333444433333222222 21110    012345677778888


Q ss_pred             HHHH-HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHh
Q 021354           84 SFIG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVV  154 (313)
Q Consensus        84 g~~~-~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~  154 (313)
                      |++. ...+.++++++++.+++.++.+.++.|++..++++++++|+++..      +++|.++.+.|+.+..
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~  286 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINV  286 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHh
Confidence            8888 788899999999999999999999999999999999999999999      9999999999987654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.47  E-value=1.2e-06  Score=80.70  Aligned_cols=121  Identities=14%  Similarity=0.163  Sum_probs=92.9

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCCCccc--cccChhhHHHHHHHHh
Q 021354          187 NWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLW--RLKPDVALVSIVYSAF  264 (313)
Q Consensus       187 ~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~lgv  264 (313)
                      +...|.+++++++++|+...+..|.. .+.+ |.+.+++.++++.+.+.+...... +....  .......+ .....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICR-QWSYLKTLIQTPQKI-FMLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHcCHHHH-HHHHHHH
Confidence            34689999999999999999999864 5664 799999999999887776654432 11110  01111222 2233556


Q ss_pred             hhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          265 LGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       265 ~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      +..++.+.++++++++.+++.++...++.|++.+++++++++|+++.
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~  127 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRR  127 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence            66778899999999999999999999999999999999999999875

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.44  E-value=1e-05  Score=70.54  Aligned_cols=204  Identities=13%  Similarity=0.131  Sum_probs=152.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCC
Q 021354           80 IILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGP  159 (313)
Q Consensus        80 ~~~~g~~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~  159 (313)
                      ..-+++-..+.++.-..+++|.|=-.+.+=-+.-|+=+.+++.++.+++.+|+      +..-+++.++|+.+... +.+
T Consensus        88 YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~------kY~cVL~IV~GValFmY-K~~  160 (337)
T KOG1580|consen   88 YAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWR------KYCCVLMIVVGVALFMY-KEN  160 (337)
T ss_pred             HHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHH------HHHHHHHHHHHHHHhhc-ccc
Confidence            33455555677888888999998655555566788888999999999998888      99999999999987665 432


Q ss_pred             ccccCCCCCCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHHHHHH
Q 021354          160 TIFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYP-AELLVAFLYNLFAAVIAVPLC  238 (313)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~-~~~~~t~~~~l~~~~~~~~~~  238 (313)
                      ...                   +..+.+...|.++.++|---=+.-...|.+..+.+. ....++.+.++.+.+.+-.-.
T Consensus       161 Kv~-------------------g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~  221 (337)
T KOG1580|consen  161 KVG-------------------GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGL  221 (337)
T ss_pred             ccC-------------------CCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhh
Confidence            211                   113455678999999988877788888888765543 346788888988888766544


Q ss_pred             hhcCCCCc--cccccChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCccc
Q 021354          239 LFAEPDLS--LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLH  310 (313)
Q Consensus       239 ~~~~~~~~--~~~~~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~  310 (313)
                      ++.++..+  .+....+..|+.+..+++ ++.++.+..+..+..-||-.-|++...--.++++.++++++.+++
T Consensus       222 lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls  294 (337)
T KOG1580|consen  222 LFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLS  294 (337)
T ss_pred             eehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCc
Confidence            44332111  111112345677777776 778888888999999999999999999999999999999999886

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.36  E-value=1.4e-05  Score=75.40  Aligned_cols=139  Identities=17%  Similarity=0.184  Sum_probs=102.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCC----------Cc
Q 021354            9 EALLLSATVAVECTTVGLNTLFKAAASK------GLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVP----------SF   72 (313)
Q Consensus         9 ~~~~~l~l~~~~~~~g~~~~~~K~~l~~------~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~----------~~   72 (313)
                      +..+.+..+++++.|+...+..|..+++      ..++.....+-...++++++|+.... |......          ..
T Consensus       192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~-e~~~~~~~~~~~~~~~~~~  270 (350)
T PTZ00343        192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFF-EGKKWVPVWTNYTANMTNY  270 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHhhhccccc
Confidence            4568889999999999999999998753      25677777777889999998887643 3211000          00


Q ss_pred             cHHH-HHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHH
Q 021354           73 KFSI-LSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGAL  151 (313)
Q Consensus        73 ~~~~-~~~~~~~g~~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~  151 (313)
                      .... +...+..++...+.+...+.+++++++..+++..++.|+++.++++++++|+++..      +++|.++.+.|++
T Consensus       271 ~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~  344 (350)
T PTZ00343        271 TKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGAL  344 (350)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHH
Confidence            1111 11122222333455566668999999999999999999999999999999999999      9999999999997


Q ss_pred             HHh
Q 021354          152 VVV  154 (313)
Q Consensus       152 ll~  154 (313)
                      +..
T Consensus       345 lYs  347 (350)
T PTZ00343        345 LYS  347 (350)
T ss_pred             HHh
Confidence            644

>TIGR00688 rarD rarD protein

Probab=98.34  E-value=3.6e-06  Score=75.77  Aligned_cols=119  Identities=10%  Similarity=0.146  Sum_probs=90.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCCC---cccc-ccChhhHHHHHHHHhh
Q 021354          190 TGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL---SLWR-LKPDVALVSIVYSAFL  265 (313)
Q Consensus       190 ~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~ll~lgv~  265 (313)
                      .|..++++++++|+...+..|. ..+.+ |.+++++.++++++.+.+.........   ..++ .+..+.+..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4788999999999999999997 45664 799999999999888776554332110   1111 1111123344455554


Q ss_pred             hhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          266 GPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       266 ~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                       ..+.+.++++++++.+++.++...++.|++++++++++++|+++.
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~  124 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISR  124 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence             567889999999999999999999999999999999999999985

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.24  E-value=1.1e-05  Score=66.41  Aligned_cols=120  Identities=13%  Similarity=0.288  Sum_probs=92.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh------cChhHHHHHHHHHHHHHHHHHHHhhcCCCCc-c-c-ccc------Chhh
Q 021354          191 GGFLLAAQCFLLSIWSILLTQIINI------YPAELLVAFLYNLFAAVIAVPLCLFAEPDLS-L-W-RLK------PDVA  255 (313)
Q Consensus       191 G~ll~l~aa~~~a~~~v~~k~~~~~------~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~-~-~-~~~------~~~~  255 (313)
                      |.++++.|+++.+++.++.|+..++      ..++.....+....+.+.+.+...+.|+... . . ...      ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999987655      2357888999999999999999887765321 1 1 000      1133


Q ss_pred             HHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          256 LVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       256 ~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      +..++..|+++ .......++.+++.+|...++...+-.+..+++|++++||++|.
T Consensus        81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~  135 (153)
T PF03151_consen   81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITP  135 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCH
Confidence            44555556544 34555688899999999999999999999999999999999885

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.23  E-value=5.2e-05  Score=68.51  Aligned_cols=132  Identities=21%  Similarity=0.207  Sum_probs=104.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH-HHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHH-
Q 021354           10 ALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVA-YSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-   87 (313)
Q Consensus        10 ~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~-~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-   87 (313)
                      ..+.++.+.+.+.|+...+..|...  ..++..... +.+..+.....+....  +++ .  ....+++......|+++ 
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~--~~~~~~~~~~~~~g~~~~  225 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLFFLS--GFG-A--PILSRAWLLLLYLGVFST  225 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHHhc--ccc-c--cCCHHHHHHHHHHHHHHH
Confidence            4678889999999999999999764  467777777 5555333333333222  121 1  24567777888888888 


Q ss_pred             HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHh
Q 021354           88 VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVV  154 (313)
Q Consensus        88 ~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~  154 (313)
                      ...+.+++.+++..+++.++.+.++.|++..++++++++|+++.+      +++|.++.+.|+.+..
T Consensus       226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~  286 (292)
T COG0697         226 GLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHh
Confidence            469999999999999999999999999999999999999999999      9999999999987655

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.23  E-value=2.4e-05  Score=71.97  Aligned_cols=129  Identities=15%  Similarity=0.040  Sum_probs=98.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH---HHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHH
Q 021354           10 ALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYP---LATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFI   86 (313)
Q Consensus        10 ~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~---~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   86 (313)
                      ++++...+++.+.++......|..   +.||...++....   +++.++.+.. .+ +   + +. ..+........|++
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~-~~-~---~-~~-~~~~~~~~~~~Gi~  220 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH-IL-A---K-PL-KKYAILLNILPGLM  220 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH-hc-c---c-ch-HHHHHHHHHHHHHH
Confidence            679999999999999999999974   3799988555554   4444333322 12 1   1 21 22333344457777


Q ss_pred             HHHHHHHHHHHhh-ccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccch----hhHHHHHHhHHHHh
Q 021354           87 GVLSQIFGYTGIA-CSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKI----IGTMVSISGALVVV  154 (313)
Q Consensus        87 ~~~~~~~~~~gl~-~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~----~gi~l~~~G~~ll~  154 (313)
                      -...+.+++.+.+ +.+++.++.+.+..|+...+.++++++|+.+++      ++    +|.++.+.|+.++.
T Consensus       221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence            6677888999999 999999999999999999999999999999999      88    99999999887654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.22  E-value=6.5e-06  Score=64.73  Aligned_cols=66  Identities=15%  Similarity=0.147  Sum_probs=59.8

Q ss_pred             HHHHH-HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHh
Q 021354           83 LSFIG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVV  154 (313)
Q Consensus        83 ~g~~~-~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~  154 (313)
                      .++.+ ...+.++..+++..|.+.+-.+.++.|+++.+++++++|||++++      |++|+++.++|+.++.
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence            34354 678899999999999999999999999999999999999999999      9999999999998765

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.01  E-value=0.0016  Score=59.16  Aligned_cols=240  Identities=15%  Similarity=0.152  Sum_probs=160.0

Q ss_pred             CHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcc--hhhHH
Q 021354           39 SYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISN--LTPAF  116 (313)
Q Consensus        39 ~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~gl~~t~a~~as~i~~--~~P~~  116 (313)
                      +|..+.+..-..+.++-..+..   .++..  ...+.-+......++.+.....+.+.+++|.+=-...+==.  +.|+ 
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~---~~k~~--~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPV-  123 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLK---WWKKE--LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPV-  123 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHh---ccccc--CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHH-
Confidence            4566666666666655443322   22222  12234456677888888889999999999997322222112  4554 


Q ss_pred             HHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCCCCCCCccccccCCCCCCchhhHHHHHH
Q 021354          117 TFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLA  196 (313)
Q Consensus       117 ~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l  196 (313)
                       .+.+.++.+.|.+.+      +..-.++.-.|+.+....+..+        +      +    +...+.+...|..++.
T Consensus       124 -mlmg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~--------s------~----~~~g~~ns~~G~~Ll~  178 (327)
T KOG1581|consen  124 -MLMGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSD--------S------S----SKSGRENSPIGILLLF  178 (327)
T ss_pred             -HHHHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCC--------C------c----cccCCCCchHhHHHHH
Confidence             677888898888888      7777777678876655421111        0      0    0112345578999988


Q ss_pred             HHHHHHHHHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHHHHHHhhcCCCCc--cc-cccChhhHHHHHHHHhhhhHHHHH
Q 021354          197 AQCFLLSIWSILLTQIINIYP-AELLVAFLYNLFAAVIAVPLCLFAEPDLS--LW-RLKPDVALVSIVYSAFLGPSFNTI  272 (313)
Q Consensus       197 ~aa~~~a~~~v~~k~~~~~~~-~~~~~t~~~~l~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~ll~lgv~~s~~~~~  272 (313)
                      ..-..=+.-+..|+++.++.. ++..++++.++++++.-.......+...+  .+ ..+ ++.+..++..+. +.+++..
T Consensus       179 ~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~h-p~~~~Di~l~s~-~gavGQ~  256 (327)
T KOG1581|consen  179 GYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEH-PDVAFDILLYST-CGAVGQL  256 (327)
T ss_pred             HHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcC-hhHHHHHHHHHH-hhhhhhh
Confidence            888888888888999877543 35788899999998887776433222111  11 222 345666665665 4456666


Q ss_pred             HHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          273 IHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       273 l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      ..++-+++-|+-.-+.++..-=++++.++.+++|.++++
T Consensus       257 FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~  295 (327)
T KOG1581|consen  257 FIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSS  295 (327)
T ss_pred             eehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccch
Confidence            777889999999999999999999999999999998865

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.88  E-value=0.00037  Score=64.42  Aligned_cols=117  Identities=19%  Similarity=0.240  Sum_probs=83.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHH-
Q 021354            9 EALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-   87 (313)
Q Consensus         9 ~~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-   87 (313)
                      ..-+....+.+++.-+.+..+.|.+..+. +.   ..               .+ +++.. ++. .+  ...++.|+.- 
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~-~~---~~---------------~~-~~~~~-~~~-l~--~~~W~~G~~~~   60 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRL-PR---GS---------------LR-AGSGG-RSY-LR--RPLWWIGLLLM   60 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hc---cc---------------cc-ccchh-hHH-Hh--hHHHHHHHHHH
Confidence            35567778888888999999999875431 10   00               00 00000 001 11  1234556554 


Q ss_pred             HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           88 VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        88 ~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      ......-+.++.+.|++..+-+..+.-++..+++..+.+||++++      .+.|+++++.|..++..
T Consensus        61 ~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   61 VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVI  122 (300)
T ss_pred             hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEE
Confidence            566778889999999999998888888999999999999999999      99999999999987765

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.86  E-value=0.00029  Score=56.89  Aligned_cols=117  Identities=20%  Similarity=0.213  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHH-HHH
Q 021354           12 LLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-VLS   90 (313)
Q Consensus        12 ~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~   90 (313)
                      +++..+...++=+....+.|.++++ .++...... . ...+    .. .. +     |   .    .....|+.. .+.
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~~~~----~~-~~-~-----p---~----~~i~lgl~~~~la   61 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-IAAL----LA-FG-L-----A---L----RAVLLGLAGYALS   61 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-HHHH----HH-Hh-c-----c---H----HHHHHHHHHHHHH
Confidence            4666777777778888999999764 444332221 1 1110    00 11 0     1   0    134567776 788


Q ss_pred             HHHHHHHhhccCchhhhhhcchhhHHHHHHHHH--HhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           91 QIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL--FRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        91 ~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~--~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      +.++..+++..+++.+.-+.+..+..+.+.++.  +++|+++++      |++|+++.++|++++..
T Consensus        62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhcc
Confidence            999999999999999999999988888888875  799999999      99999999999987653

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=97.82  E-value=0.0005  Score=61.67  Aligned_cols=192  Identities=16%  Similarity=0.131  Sum_probs=124.0

Q ss_pred             HHHHHHHHHHHHh---CCC----CHHHHHHHHHHHHHHHHHhhhhhhcCCCccC---C---------CccHHHHHHHHHH
Q 021354           23 TVGLNTLFKAAAS---KGL----SYYVFVAYSYPLATLALLPLPLIFRNTTTVV---P---------SFKFSILSRIILL   83 (313)
Q Consensus        23 ~g~~~~~~K~~l~---~~~----~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~   83 (313)
                      =+.|-+++|.+=+   .+-    +|+..+-.-|+.=++++..+.+++ .|...+   .         +.+.+-. ..+.-
T Consensus        15 Gs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir-~~sn~~g~~s~~~~ilsq~~~pf~p~-lfl~P   92 (372)
T KOG3912|consen   15 GSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIR-LRSNGQGVSSDLDSILSQDSSPFNPV-LFLPP   92 (372)
T ss_pred             ccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCCcccccccccccccCCCCcc-eecCh
Confidence            3456677887522   122    366666666666667777766654 221110   0         0011111 12235


Q ss_pred             HHHHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCcccc
Q 021354           84 SFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFL  163 (313)
Q Consensus        84 g~~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~  163 (313)
                      +++......+.+.|+.+|+|+.---+=...-+|+.+++.-+++.++..+      ||.|+.....|+..+.. ..  .. 
T Consensus        93 al~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~-~d--~~-  162 (372)
T KOG3912|consen   93 ALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGS-LD--VH-  162 (372)
T ss_pred             HHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeee-ee--cc-
Confidence            5666777888899999999764444444556788999999999999999      99999999999876543 11  10 


Q ss_pred             CCCCCCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHh-hcChhHHHHHHHHHHHHHHHHHHHh
Q 021354          164 GTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIIN-IYPAELLVAFLYNLFAAVIAVPLCL  239 (313)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~-~~~~~~~~t~~~~l~~~~~~~~~~~  239 (313)
                       .++|++            +.-++...|+++.+.+-+.-|...+.-.|..+ ...+|.....|+.++|.+.+...+.
T Consensus       163 -~~~~p~------------~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i  226 (372)
T KOG3912|consen  163 -LVTDPY------------TDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAI  226 (372)
T ss_pred             -cccCCc------------cccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHH
Confidence             111111            11234578999999999999999998666544 4446899999999999766665553

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.82  E-value=0.012  Score=55.30  Aligned_cols=278  Identities=13%  Similarity=0.065  Sum_probs=151.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhh--hhcCCCcc--CCCccHHHHHHHHHHH
Q 021354            9 EALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPL--IFRNTTTV--VPSFKFSILSRIILLS   84 (313)
Q Consensus         9 ~~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~g   84 (313)
                      -..+++..++++++||++++-.|.. + +-+ ++.-+.-..+-.-++.|+..  .. .+...  ....+.+.+...++.|
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~~-k-~w~-wE~~W~v~gi~~wl~~~~~~g~~~-~~~f~~~~~~~~~~~~~~~~l~G   80 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKKV-K-KWS-WETMWSVGGIFSWLILPWLIAALL-LPDFWAYYSSFSGSTLLPVFLFG   80 (345)
T ss_pred             hHHHHHHHHHHHHHhhccccccccc-C-CCc-hhHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHhcCHHHHHHHHHHH
Confidence            3557888999999999999999984 3 233 22222211111112222111  10 11000  0113344455555556


Q ss_pred             HHHHHHHHHHHHHhhccCchhhhhhc-chhhHHHHHHHHHHhhhcc---cccccccccchhhHHHHHHhHHHHhhhcCCc
Q 021354           85 FIGVLSQIFGYTGIACSSPTLSSAIS-NLTPAFTFTLAVLFRMEKL---ALRTLSTQAKIIGTMVSISGALVVVLYKGPT  160 (313)
Q Consensus        85 ~~~~~~~~~~~~gl~~t~a~~as~i~-~~~P~~~~ll~~~~~~E~~---~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~  160 (313)
                      ++=...+..++.++++...+.+.-+. .++-+...++..++++|--   +.+  ......+|+++.++|+.+... .+..
T Consensus        81 ~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~--~g~~~~~gv~liliGi~l~s~-Ag~~  157 (345)
T PRK13499         81 ALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATN--GGRMTLLGVLVALIGVAIVGR-AGQL  157 (345)
T ss_pred             HHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccc--hHHHHHHHHHHHHHHHHHHHH-hhhh
Confidence            66577899999999999988887664 4778888888888888743   221  122258889999999887664 1100


Q ss_pred             cccCCCCCCCCCCCccccccCC-CCCCchhhHHHHHHHHHHHHHHHH-------HHHHHHH-hhcChhHHHHHHH---HH
Q 021354          161 IFLGTSPSSTHSTNSLHWLMGS-PSVSNWVTGGFLLAAQCFLLSIWS-------ILLTQII-NIYPAELLVAFLY---NL  228 (313)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~G~ll~l~aa~~~a~~~-------v~~k~~~-~~~~~~~~~t~~~---~l  228 (313)
                      -    ++ +.     .    ++ ..+++...|...++++.+.+++|.       ...+... .+.+ +.....-+   ++
T Consensus       158 k----~~-~~-----~----~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~-~~~~~lp~~~~~~  222 (345)
T PRK13499        158 K----ER-KM-----G----IKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVD-PLYAALPSYVVIM  222 (345)
T ss_pred             c----cc-cc-----c----cccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCC-chHHHHHHHHHHH
Confidence            0    00 00     0    00 124566789999999999999999       4333211 1222 22222222   33


Q ss_pred             HHHHHHHHHH-hh---cCCCC---ccccccChhhHHHH---HHHHhhhhHHHHHHHHHHhhccCceeee----cccchHH
Q 021354          229 FAAVIAVPLC-LF---AEPDL---SLWRLKPDVALVSI---VYSAFLGPSFNTIIHTWGLRLKGPVYIA----IFKPLSV  294 (313)
Q Consensus       229 ~~~~~~~~~~-~~---~~~~~---~~~~~~~~~~~~~l---l~lgv~~s~~~~~l~~~~l~~~~~~~vs----~~~~l~P  294 (313)
                      .|++...... ..   .+++.   .+...+-+..+-..   +..|+ .=.+++..|..+-++.|.....    +.+-+.-
T Consensus       223 ~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~V  301 (345)
T PRK13499        223 GGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYV  301 (345)
T ss_pred             HHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHH
Confidence            5555444322 21   12221   11111100001121   12222 2245666777777777665433    3336666


Q ss_pred             HHHHHHHHHHhcCccc
Q 021354          295 VIAAITGIIFLGDTLH  310 (313)
Q Consensus       295 v~a~l~~~~~l~E~l~  310 (313)
                      +++.+.|.+ ++|+=+
T Consensus       302 iistlwGi~-lkE~K~  316 (345)
T PRK13499        302 LCGNLWGLV-LKEWKG  316 (345)
T ss_pred             HHHHHhhhh-hhhccC
Confidence            999999994 999754

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.81  E-value=0.00022  Score=63.75  Aligned_cols=240  Identities=13%  Similarity=0.137  Sum_probs=140.5

Q ss_pred             CHHHHHHHHHHHHHHHHHhhhhhhcCCC--cc-CCC--ccHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchh
Q 021354           39 SYYVFVAYSYPLATLALLPLPLIFRNTT--TV-VPS--FKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLT  113 (313)
Q Consensus        39 ~p~~~~~~R~~~a~~~l~~~~~~~~~~~--~~-~~~--~~~~~~~~~~~~g~~~~~~~~~~~~gl~~t~a~~as~i~~~~  113 (313)
                      .|..+.++..+....+.+.+.... .+.  .. .++  ++.+.-++..-+.+...+.-.+=..-++|.+.+.=-+==.++
T Consensus        60 ~plf~t~~qcLvt~~~c~~ls~ls-~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLt  138 (347)
T KOG1442|consen   60 APLFITWYQCLVTTSICLVLSSLS-VKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLT  138 (347)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHH-hhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchh
Confidence            578889999988876655544322 111  10 011  222333333333333221222222345555543222222367


Q ss_pred             hHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCCCCCCCccccccCCCCCCchhhHHH
Q 021354          114 PAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGF  193 (313)
Q Consensus       114 P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l  193 (313)
                      -+|+.++.++++|+|-+..      -.     +.+|++++.++-|.+.+                   +..+.-...|.+
T Consensus       139 tvFtVlLtyvllkqkTs~~------~~-----~~C~lIi~GF~lGvdqE-------------------~~~~~ls~~Gvi  188 (347)
T KOG1442|consen  139 TVFTVLLTYVLLKQKTSFF------AL-----GCCLLIILGFGLGVDQE-------------------GSTGTLSWIGVI  188 (347)
T ss_pred             hhHHHHhHHhhcccccccc------cc-----eeehhheehheeccccc-------------------cccCccchhhhH
Confidence            7899999999999998766      22     22333333333333221                   111222358999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHHHHHHhhcCCCCc--cccccC-hhhHHHHHHHHhhhhHH
Q 021354          194 LLAAQCFLLSIWSILLTQIINIYP-AELLVAFLYNLFAAVIAVPLCLFAEPDLS--LWRLKP-DVALVSIVYSAFLGPSF  269 (313)
Q Consensus       194 l~l~aa~~~a~~~v~~k~~~~~~~-~~~~~t~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~ll~lgv~~s~~  269 (313)
                      +...++++-|...+..|+...... .-+..+++.++.+.+.++|...+.++-..  .++..+ ...|..+...|+++-.+
T Consensus       189 fGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~m  268 (347)
T KOG1442|consen  189 FGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAM  268 (347)
T ss_pred             HHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHh
Confidence            999999999999999997654433 24789999999999999998766543111  222222 23345555666655555


Q ss_pred             HHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCccc
Q 021354          270 NTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLH  310 (313)
Q Consensus       270 ~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~  310 (313)
                      +|. -.|=+|-.+|..=.+...---..=.+++..+++|.-+
T Consensus       269 gyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks  308 (347)
T KOG1442|consen  269 GYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKS  308 (347)
T ss_pred             hhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhh
Confidence            544 4455677777776666666666777788888888654

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=97.74  E-value=0.00012  Score=62.45  Aligned_cols=98  Identities=17%  Similarity=0.255  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCC
Q 021354           88 VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSP  167 (313)
Q Consensus        88 ~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~  167 (313)
                      .+.++.+..+++..+++.++.+..+...|+.+++++++++|+.--      |+++.++++.|++++.+.+.         
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~DN---------  128 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYADN---------  128 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEeccc---------
Confidence            457889999999999999999999999999999999999999888      99999999999887774111         


Q ss_pred             CCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 021354          168 SSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIY  216 (313)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~  216 (313)
                                      .+.+...|..++..|++.-|+|-+..|+...+-
T Consensus       129 ----------------~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnA  161 (290)
T KOG4314|consen  129 ----------------EHADEIIGIACAVGSAFMAALYKVLFKMFIGNA  161 (290)
T ss_pred             ----------------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence                            233446999999999999999999999987553

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=97.65  E-value=0.00043  Score=60.14  Aligned_cols=204  Identities=13%  Similarity=0.208  Sum_probs=143.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCc
Q 021354           81 ILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPT  160 (313)
Q Consensus        81 ~~~g~~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~  160 (313)
                      +..+++-...-+.--.+++|.+...=+++-+++-+.++....++|+.|++-.      ....-.+.+...++-..  ++.
T Consensus        72 fpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~w--~D~  143 (309)
T COG5070          72 FPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVATW--GDQ  143 (309)
T ss_pred             cCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhcc--chh
Confidence            3444444333444457889999888889999998899999999999998776      66666665555443111  100


Q ss_pred             cccCCCCCCCCCCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHh--hcChhHHHHHHHHHHHHHHHHHHH
Q 021354          161 IFLGTSPSSTHSTNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIIN--IYPAELLVAFLYNLFAAVIAVPLC  238 (313)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~--~~~~~~~~t~~~~l~~~~~~~~~~  238 (313)
                      .           .  .     ........-|.+++...+++-+.|.+..|+..+  +..+ ...++|..+.+..+++.+.
T Consensus       144 q-----------~--~-----~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d-~dtmfYnNllslPiL~~~s  204 (309)
T COG5070         144 Q-----------A--S-----AFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKD-FDTMFYNNLLSLPILLSFS  204 (309)
T ss_pred             h-----------H--H-----HHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccch-hhHHHHhhhHHHHHHHHHH
Confidence            0           0  0     001123357899999999999999999998653  3334 6778999999999999888


Q ss_pred             hhcCC-CCccccc-cChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCccccC
Q 021354          239 LFAEP-DLSLWRL-KPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG  312 (313)
Q Consensus       239 ~~~~~-~~~~~~~-~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~~  312 (313)
                      .++|+ ++.+... .+++....+...|+.+.++.|. -.|+.+-.+.+.-|.+..+.-.-..+-|.+++||+.+-.
T Consensus       205 ~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~-saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~  279 (309)
T COG5070         205 FLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYC-SAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL  279 (309)
T ss_pred             HHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhc-cceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH
Confidence            87764 2322111 1223445666677766666666 789999999999999999998889999999999998754

>TIGR00803 nst UDP-galactose transporter

Probab=97.57  E-value=0.00061  Score=59.99  Aligned_cols=183  Identities=14%  Similarity=0.097  Sum_probs=104.9

Q ss_pred             hhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhh-----------cCCccccCCCCCCCCCCCc
Q 021354          107 SAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLY-----------KGPTIFLGTSPSSTHSTNS  175 (313)
Q Consensus       107 s~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~-----------~g~~~~~~~~~~~~~~~~~  175 (313)
                      ...-+..|+++.+..+...+||....      |++++++...|++.-...           .+..... .++ +   . +
T Consensus         8 ~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~-~~~-~---~-~   75 (222)
T TIGR00803         8 IIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQ-MVQ-S---S-A   75 (222)
T ss_pred             HHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeee-cCC-C---C-c
Confidence            44556778888888888888888766      899999888887642210           0100000 000 0   0 0


Q ss_pred             cccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHH-HHHHHHHHHHHHHHHHhhcCCCC-cccc---c
Q 021354          176 LHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLV-AFLYNLFAAVIAVPLCLFAEPDL-SLWR---L  250 (313)
Q Consensus       176 ~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~-t~~~~l~~~~~~~~~~~~~~~~~-~~~~---~  250 (313)
                      +     .....+...|....+.++++-+.-.+.+++..|+.+...-. .....+++.+.........+.+. ..+.   .
T Consensus        76 ~-----~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (222)
T TIGR00803        76 K-----TLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIG  150 (222)
T ss_pred             c-----ccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccC
Confidence            0     00112345777788888888888888888765543211111 11112222222111111111111 1111   1


Q ss_pred             cChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          251 KPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       251 ~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      .+.. .+.+    ++..+++..+..+.+|+.++...+....++++++.+++++++||+++.
T Consensus       151 ~~~~-~~~~----~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~  206 (222)
T TIGR00803       151 YPTA-VWIV----GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISS  206 (222)
T ss_pred             CchH-HHHH----HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccH
Confidence            1111 1222    233455666788999999999999999999999999999999999985

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.39  E-value=0.0029  Score=59.18  Aligned_cols=139  Identities=12%  Similarity=-0.006  Sum_probs=101.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCc--cHHHHHHHHHHHH
Q 021354            8 REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSF--KFSILSRIILLSF   85 (313)
Q Consensus         8 ~~~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~   85 (313)
                      ++.++=+..+.+++++|.+.+..|...+ +.|+.++...=-+++.++..+..... |++.. .+.  +.+.......-++
T Consensus       165 ~~i~GDll~l~~a~lya~~nV~~E~~v~-~~~~~~~lg~~Glfg~ii~~iq~~il-e~~~i-~~~~w~~~~~~~~v~~~~  241 (334)
T PF06027_consen  165 NPILGDLLALLGAILYAVSNVLEEKLVK-KAPRVEFLGMLGLFGFIISGIQLAIL-ERSGI-ESIHWTSQVIGLLVGYAL  241 (334)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHHhe-ehhhh-hccCCChhhHHHHHHHHH
Confidence            4566677889999999999999999876 47988888777777888877776665 54333 222  3232222222222


Q ss_pred             HHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           86 IGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        86 ~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      ..+....+.-..+++++|+...+-.-+..++..++++++++|++++.      .++|.++.++|.++...
T Consensus       242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~  305 (334)
T PF06027_consen  242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNL  305 (334)
T ss_pred             HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEc
Confidence            22445556667788999887777666788899999999999999998      89999999999876554

Some of the sequences in this family are annotated as putative membrane proteins.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=97.36  E-value=0.00041  Score=54.52  Aligned_cols=55  Identities=16%  Similarity=0.313  Sum_probs=47.3

Q ss_pred             HHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          256 LVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       256 ~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      +...+..|++....++.++.+++++.++ .++....+.|++++++++++++|+++.
T Consensus        34 ~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~   88 (113)
T PF13536_consen   34 WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSP   88 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCH
Confidence            4445556676666899999999999995 888999999999999999999999875

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.25  E-value=0.0023  Score=51.58  Aligned_cols=102  Identities=19%  Similarity=0.180  Sum_probs=74.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCCCccccccChhhHHHHHHHHhhhhHH
Q 021354          190 TGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSF  269 (313)
Q Consensus       190 ~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~lgv~~s~~  269 (313)
                      .|.++.+.+.++-+...+..|+-.++.++ ...... .    . ..... ..+             ....+++|+.+.++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~-~~~~~-~~~-------------p~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----I-AALLA-FGL-------------ALRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----H-HHHHH-Hhc-------------cHHHHHHHHHHHHH
Confidence            36788899999999999999987766543 221111 0    0 00000 000             12246788999999


Q ss_pred             HHHHHHHHhhccCceeeecccchHHHHHHHHHHH--HhcCccccC
Q 021354          270 NTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGII--FLGDTLHLG  312 (313)
Q Consensus       270 ~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~--~l~E~l~~~  312 (313)
                      ++.+|.+++++.+++.+..+..+.++...+.++.  ++||++|+.
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~  105 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK  105 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence            9999999999999999999999999888888885  899999863

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.14  E-value=0.0092  Score=55.12  Aligned_cols=138  Identities=17%  Similarity=0.162  Sum_probs=107.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHhhhhh--hcCCCccCC--CccHHHHHHHHHHHHH
Q 021354           12 LLSATVAVECTTVGLNTLFKAAAS-KGLSYYVFVAYSYPLATLALLPLPLI--FRNTTTVVP--SFKFSILSRIILLSFI   86 (313)
Q Consensus        12 ~~l~l~~~~~~~g~~~~~~K~~l~-~~~~p~~~~~~R~~~a~~~l~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~g~~   86 (313)
                      ++++++++.++-|......+...+ ++.++.+.+++-...+.++..+....  .++-....+  ....+.+..++..++.
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence            788999999999999999988774 46899999999999998887776665  201110000  0111234455666677


Q ss_pred             HHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           87 GVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        87 ~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      +...+.+.+.-.+..++...+++..+--+++.+++.++++++++..      +|+|+++.+.|..+=..
T Consensus       235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~------~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPL------QWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChH------HHHHHHHhHHHHHHHHH
Confidence            7777777778889999999999999999999999999999999999      99999999999876443

; GO: 0055085 transmembrane transport

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.11  E-value=0.009  Score=53.07  Aligned_cols=129  Identities=16%  Similarity=0.118  Sum_probs=104.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHH-HH
Q 021354           11 LLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-VL   89 (313)
Q Consensus        11 ~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   89 (313)
                      .+..+.+.+..+|...-+..|.+-+ ..+--.-+..-+.+++++.+|+-.-. .. .  --.....+...+..|++. .+
T Consensus       148 ~Gv~~Al~AG~~Wa~YIv~G~r~g~-~~~g~~g~a~gm~vAaviv~Pig~~~-ag-~--~l~~p~ll~laLgvavlSSal  222 (292)
T COG5006         148 VGVALALGAGACWALYIVLGQRAGR-AEHGTAGVAVGMLVAALIVLPIGAAQ-AG-P--ALFSPSLLPLALGVAVLSSAL  222 (292)
T ss_pred             HHHHHHHHHhHHHHHHHHHcchhcc-cCCCchHHHHHHHHHHHHHhhhhhhh-cc-h--hhcChHHHHHHHHHHHHhccc
Confidence            3456677888999999999887643 35667778889999999999987543 11 1  113345566677778888 78


Q ss_pred             HHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhH
Q 021354           90 SQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGA  150 (313)
Q Consensus        90 ~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~  150 (313)
                      .+.+-..+++..|...-+++.++.|.+.++.++++++|+++..      ||.++...+.+.
T Consensus       223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAs  277 (292)
T COG5006         223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAAS  277 (292)
T ss_pred             chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999      999998876654

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.83  E-value=0.015  Score=45.44  Aligned_cols=60  Identities=12%  Similarity=0.124  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHhhccCchhhhhhc-chhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHH
Q 021354           88 VLSQIFGYTGIACSSPTLSSAIS-NLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVV  153 (313)
Q Consensus        88 ~~~~~~~~~gl~~t~a~~as~i~-~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll  153 (313)
                      ...+.+...++++.|.+.+=.+. ..--+.+.+.++++++|++++.      |++|+.+.+.|++.+
T Consensus        46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l  106 (109)
T PRK10650         46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence            66888889999999988775544 4677888999999999999999      999999999998764

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=96.68  E-value=0.0043  Score=48.66  Aligned_cols=49  Identities=6%  Similarity=-0.006  Sum_probs=44.6

Q ss_pred             hhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCccccC
Q 021354          264 FLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG  312 (313)
Q Consensus       264 v~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~~  312 (313)
                      +.+-++++.++.+++++.+.+.+....++.++++++.|++++||++|+.
T Consensus        44 ~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~   92 (111)
T PRK15051         44 LACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR   92 (111)
T ss_pred             HHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            3556789999999999999999999999999999999999999999863

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=96.65  E-value=0.013  Score=53.14  Aligned_cols=120  Identities=14%  Similarity=0.197  Sum_probs=91.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCCCcccc-ccChhhHHHHHHHHhhhh
Q 021354          189 VTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWR-LKPDVALVSIVYSAFLGP  267 (313)
Q Consensus       189 ~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~lgv~~s  267 (313)
                      ..|.++.+.+-+.|+.--...|- .++.+ +.++...-.+.+...++...........-++ ...+..+..+...++. -
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kl-l~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKL-LEPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHH-HccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence            47899999999999998888775 45655 5788888888888877776655432211111 2223445555555554 3


Q ss_pred             HHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          268 SFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       268 ~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      .....+|.|+.++.....+|+=.++.|++.++.|.++++|+++.
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~  126 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSR  126 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccH
Confidence            56899999999999999999999999999999999999999874

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.54  E-value=0.0086  Score=55.54  Aligned_cols=140  Identities=14%  Similarity=0.172  Sum_probs=105.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHHHH-hhhhhhcCCCc----cCCCccHHHHHH
Q 021354            8 REALLLSATVAVECTTVGLNTLFKAAAS---KGLSYYVFVAYSYPLATLALL-PLPLIFRNTTT----VVPSFKFSILSR   79 (313)
Q Consensus         8 ~~~~~~l~l~~~~~~~g~~~~~~K~~l~---~~~~p~~~~~~R~~~a~~~l~-~~~~~~~~~~~----~~~~~~~~~~~~   79 (313)
                      -++.+.....++.+....-.++.|..+.   ..+++..+..+--.++.+.++ |+.... +...    .....+.+ ...
T Consensus       160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~-~~~~~~~~~~~~~~~~-~~~  237 (316)
T KOG1441|consen  160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYV-EGNKFVGFLTAPWFVT-FLI  237 (316)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhh-cccceeeeeccccchh-hHH
Confidence            3567788888999999999999999883   359999999999999999999 876654 3211    10123333 333


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           80 IILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        80 ~~~~g~~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      ....+++..+.+...|+-+..++|-.=++....==.++.+.++++|+|+++..      +..|..++++|+.+-..
T Consensus       238 ~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  238 LLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHHH
Confidence            44445666778888999999999877777666555566777889999999999      99999999999876443

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.52  E-value=0.0087  Score=46.25  Aligned_cols=61  Identities=21%  Similarity=0.181  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHhhccCchhhhhh-cchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHh
Q 021354           88 VLSQIFGYTGIACSSPTLSSAI-SNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVV  154 (313)
Q Consensus        88 ~~~~~~~~~gl~~t~a~~as~i-~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~  154 (313)
                      ...+.+...++++.|.+.|=.+ ...--+.+.+.++++|+|+++..      |++|+.+.++|++.+-
T Consensus        41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhh
Confidence            6788899999999998877544 44677888999999999999999      9999999999987654

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.52  E-value=0.0099  Score=47.26  Aligned_cols=62  Identities=24%  Similarity=0.247  Sum_probs=53.7

Q ss_pred             HHHHHHHHHHhhccCchhhhhhc-chhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           88 VLSQIFGYTGIACSSPTLSSAIS-NLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        88 ~~~~~~~~~gl~~t~a~~as~i~-~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      ...+.++..++++.|.+.|=.+. ..--+.+.++++++++|++++.      |++|+.+.++|++.+-.
T Consensus        41 ~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         41 SLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence            67888999999999988776654 5777888999999999999999      99999999999987653

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.36  E-value=0.017  Score=45.18  Aligned_cols=62  Identities=27%  Similarity=0.250  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHhhccCchhhhhh-cchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           88 VLSQIFGYTGIACSSPTLSSAI-SNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        88 ~~~~~~~~~gl~~t~a~~as~i-~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      ...+.++..+++..|.+.|=.+ ...--+.+.++++++++|++++.      |++|+.+.++|++.+-.
T Consensus        41 ~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            5678888899999998877655 44677788999999999999999      99999999999987653

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.30  E-value=0.0013  Score=57.98  Aligned_cols=258  Identities=14%  Similarity=0.115  Sum_probs=142.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHHHH
Q 021354           13 LSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQI   92 (313)
Q Consensus        13 ~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   92 (313)
                      ++..++=++.||+...+...-   +=.|.+-.----+.|.++-....++.  +    |..+.+.+.--++-|.+=...|.
T Consensus         4 ~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~~--~----p~~T~~~~iv~~isG~~Ws~GQ~   74 (288)
T COG4975           4 LLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLFV--S----PELTLTIFIVGFISGAFWSFGQA   74 (288)
T ss_pred             HHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHheee--c----CccchhhHHHHHHhhhHhhhhhh
Confidence            556677788999988886542   23555444333333333322222222  1    33455544444444444467889


Q ss_pred             HHHHHhhccCchhhhhhcc-hhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCCCC
Q 021354           93 FGYTGIACSSPTLSSAISN-LTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTH  171 (313)
Q Consensus        93 ~~~~gl~~t~a~~as~i~~-~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~~~  171 (313)
                      ..+.++++...+.|.-+.+ ++=+-+.+++.+.++|--+..         -..+++...+++..  |.-++...| ++.|
T Consensus        75 ~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~---------~~IlG~iAlilivi--G~~lTs~~~-~~nk  142 (288)
T COG4975          75 NQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPT---------QIILGFIALILIVI--GIYLTSKQD-RNNK  142 (288)
T ss_pred             hhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcch---------hHHHHHHHHHHHHH--hheEeeeec-cccc
Confidence            9999999999999997765 677788888999999965444         23333333333332  111111111 0111


Q ss_pred             CCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 021354          172 STNSLHWLMGSPSVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLK  251 (313)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~  251 (313)
                      .         .+..++.-.|....+.|.+.|..|.+..+...  .+ ......-|. +|-+.....--....+.. .   
T Consensus       143 ~---------~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v~-g~saiLPqA-iGMv~~ali~~~~~~~~~-~---  205 (288)
T COG4975         143 E---------EENPSNLKKGIVILLISTLGYVGYVVLFQLFD--VD-GLSAILPQA-IGMVIGALILGFFKMEKR-F---  205 (288)
T ss_pred             c---------ccChHhhhhheeeeeeeccceeeeEeeecccc--cc-chhhhhHHH-HHHHHHHHHHhhcccccc-h---
Confidence            0         11234456899999999999999998765432  21 122222221 222222222111221111 0   


Q ss_pred             ChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCccc
Q 021354          252 PDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLH  310 (313)
Q Consensus       252 ~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~  310 (313)
                      ....|..+ .-|++ =+++...+..+.++.|.+..=.+.-+.-+++.+=|.++|+|+=|
T Consensus       206 ~K~t~~ni-i~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKt  262 (288)
T COG4975         206 NKYTWLNI-IPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKT  262 (288)
T ss_pred             HHHHHHHH-hhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCc
Confidence            11122222 12221 23456667777888888877777777888889999999999743

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.26  E-value=0.021  Score=44.32  Aligned_cols=61  Identities=7%  Similarity=0.045  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHhhccCchhhhhhc-chhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHh
Q 021354           88 VLSQIFGYTGIACSSPTLSSAIS-NLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVV  154 (313)
Q Consensus        88 ~~~~~~~~~gl~~t~a~~as~i~-~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~  154 (313)
                      ...+.+...+++..|.+.+=.+. ..--+.+.++++++++|++++.      |++|+.+.+.|++.+-
T Consensus        40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence            67888889999999988775554 4777888999999999999999      9999999999987653

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.20  E-value=0.2  Score=47.17  Aligned_cols=149  Identities=17%  Similarity=0.019  Sum_probs=84.0

Q ss_pred             hhhhHHHHHHHHHHHHHHHHH-------HHHHHHHhCCCCHHHHHHHHHH---HHHHHHHh-hhh--hhcCCCcc---CC
Q 021354            7 FREALLLSATVAVECTTVGLN-------TLFKAAASKGLSYYVFVAYSYP---LATLALLP-LPL--IFRNTTTV---VP   70 (313)
Q Consensus         7 ~~~~~~~l~l~~~~~~~g~~~-------~~~K~~l~~~~~p~~~~~~R~~---~a~~~l~~-~~~--~~~~~~~~---~~   70 (313)
                      .+.+|.++.++++.+..+...       +..+.+...+.+|.....-.+.   ++.++.-. +..  .+|+++..   .+
T Consensus       170 ~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~  249 (345)
T PRK13499        170 FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADF  249 (345)
T ss_pred             cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhc
Confidence            345778888888888888877       6666654556777655555554   44443332 222  12122210   01


Q ss_pred             CccHHHHHHH----HHHHHHHHHHHHHHHHHhhccCchhhhh---hcchhhHHHHHHHHHHhhhcccccccccccchhhH
Q 021354           71 SFKFSILSRI----ILLSFIGVLSQIFGYTGIACSSPTLSSA---ISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGT  143 (313)
Q Consensus        71 ~~~~~~~~~~----~~~g~~~~~~~~~~~~gl~~t~a~~as~---i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi  143 (313)
                      +.+++.+.+-    .+-|++-...+.++..|-+..+...+.+   +....++++.-+.-+++||+-+..+|.-+..++|+
T Consensus       250 ~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~lkE~K~a~~k~~~~l~~G~  329 (345)
T PRK13499        250 SLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLVLKEWKGASRRPVRVLSLGC  329 (345)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhhhhhccCCCccchhHHHHHH
Confidence            1122222333    3333333455667777777665444444   55345544444444469999886566666678999


Q ss_pred             HHHHHhHHHHhh
Q 021354          144 MVSISGALVVVL  155 (313)
Q Consensus       144 ~l~~~G~~ll~~  155 (313)
                      ++-++|+.++..
T Consensus       330 vliI~g~~lig~  341 (345)
T PRK13499        330 VVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHHhh
Confidence            999999887664

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.12  E-value=0.1  Score=47.35  Aligned_cols=116  Identities=11%  Similarity=-0.037  Sum_probs=80.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHH
Q 021354            8 REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG   87 (313)
Q Consensus         8 ~~~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   87 (313)
                      +.++.++.++++.+.+.....+.|..   +++|.....=......+.-..+..+. ++..+    + |...+-.+.|++-
T Consensus       135 ~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~-~~~~~----~-k~~~~nil~G~~w  205 (269)
T PF06800_consen  135 NMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFS-KKPFF----E-KKSWKNILTGLIW  205 (269)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcc-ccccc----c-cchHHhhHHHHHH
Confidence            34668889999999999988888873   37887766544332222222222221 11111    1 2233445677777


Q ss_pred             HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhccccc
Q 021354           88 VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALR  132 (313)
Q Consensus        88 ~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~  132 (313)
                      ...+.+++.+.+....+.+=.+..+.+++..+-+.+++||+-++|
T Consensus       206 ~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k  250 (269)
T PF06800_consen  206 GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK  250 (269)
T ss_pred             HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence            778888899999888888888899999999999999999997766

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.07  E-value=0.016  Score=43.86  Aligned_cols=52  Identities=21%  Similarity=0.121  Sum_probs=31.2

Q ss_pred             HHHHHHHHHHhhccCchhhh-hhcchhhHHHHHHHHHHhhhcccccccccccchhhHHH
Q 021354           88 VLSQIFGYTGIACSSPTLSS-AISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMV  145 (313)
Q Consensus        88 ~~~~~~~~~gl~~t~a~~as-~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l  145 (313)
                      ...+.++..++++.|.+.+= +...+..+.+.+++.++++|+++.+      |++|+.+
T Consensus        40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l   92 (93)
T PF00893_consen   40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence            66788999999999999884 4456888999999999999999999      9999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.94  E-value=0.045  Score=50.28  Aligned_cols=119  Identities=16%  Similarity=0.196  Sum_probs=86.7

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHH
Q 021354            7 FREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFI   86 (313)
Q Consensus         7 ~~~~~~~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   86 (313)
                      .++..+..+.+.+..+.|+++.+-|.++.+           .....       .+. +.... +..  ++  +.++.|++
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r-----------~~~~~-------~ra-~~gg~-~yl--~~--~~Ww~G~l   72 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKR-----------AGASG-------LRA-GEGGY-GYL--KE--PLWWAGML   72 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHH-----------Hhhhc-------ccc-cCCCc-chh--hh--HHHHHHHH
Confidence            455556677778888899999999987643           11111       111 11111 111  22  34456666


Q ss_pred             H-HHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           87 G-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        87 ~-~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      - ......=|.+..+.|++..+-+.++.-+..++++..+++||+++.      ..+|..+|++|..+++.
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEE
Confidence            5 567777778889999999999999999999999999999999999      89999999999888775

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.75  E-value=0.029  Score=44.01  Aligned_cols=108  Identities=17%  Similarity=0.191  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHH-HHHHHHHHH
Q 021354           17 VAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFI-GVLSQIFGY   95 (313)
Q Consensus        17 ~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~   95 (313)
                      +++.++||...+++|.+-+ +.++-.-.. |..--...     ..+          +++.     ...+. +-.....|+
T Consensus         2 l~Vg~~WG~Tnpfik~g~~-~~~~~~~~~-~~~~~~~~-----Ll~----------n~~y-----~ipf~lNq~GSv~f~   59 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSS-GLEKVKASL-QLLQEIKF-----LLL----------NPKY-----IIPFLLNQSGSVLFF   59 (113)
T ss_pred             eeehHHhcCchHHHHHHHh-hcCCccchH-HHHHHHHH-----HHH----------hHHH-----HHHHHHHHHHHHHHH
Confidence            4578899999999999865 354433321 32211111     111          1111     12322 356778899


Q ss_pred             HHhhccCchhhhhhc-chhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHH
Q 021354           96 TGIACSSPTLSSAIS-NLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALV  152 (313)
Q Consensus        96 ~gl~~t~a~~as~i~-~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~l  152 (313)
                      ..+..++-+.+.-+. ++.=++|++.++++.+|..+++      +++|+.+.+.|+.+
T Consensus        60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVAL  111 (113)
T ss_pred             HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeee
Confidence            999999999999886 5677788888888877777777      89999999999764

Many members are annotated as potential transmembrane proteins.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=95.24  E-value=0.012  Score=52.59  Aligned_cols=133  Identities=14%  Similarity=0.101  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHHHH
Q 021354           13 LSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQI   92 (313)
Q Consensus        13 ~l~l~~~~~~~g~~~~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   92 (313)
                      ..+.+.+.+.-+..+++.|. +.+..+.+..+.+-..++.+.-+.....- + +.. .+...+|++...-+|++++++|+
T Consensus       193 t~aai~s~lf~asvyIilR~-iGk~~h~~msvsyf~~i~lV~s~I~~~~i-g-~~~-lP~cgkdr~l~~~lGvfgfigQI  268 (346)
T KOG4510|consen  193 TVAAISSVLFGASVYIILRY-IGKNAHAIMSVSYFSLITLVVSLIGCASI-G-AVQ-LPHCGKDRWLFVNLGVFGFIGQI  268 (346)
T ss_pred             hHHHHHhHhhhhhHHHHHHH-hhccccEEEEehHHHHHHHHHHHHHHhhc-c-cee-cCccccceEEEEEehhhhhHHHH
Confidence            34455555555556666766 34557777777777766665544433222 2 222 23556777788889999999999


Q ss_pred             HHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           93 FGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        93 ~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      +...|+|.--|+-.+++-++.-++..+...++|+|.+++.      .|+|.++.+...+....
T Consensus       269 llTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~w------s~~Ga~~vvsS~v~~a~  325 (346)
T KOG4510|consen  269 LLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIW------SWVGAVMVVSSTVWVAL  325 (346)
T ss_pred             HHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHH------HhhceeeeehhHHHHHH
Confidence            9999999999999999999999999999999999999988      89998876555554443

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.22  E-value=0.39  Score=39.15  Aligned_cols=104  Identities=18%  Similarity=0.206  Sum_probs=74.0

Q ss_pred             CHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcc-hhhHHH
Q 021354           39 SYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISN-LTPAFT  117 (313)
Q Consensus        39 ~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~gl~~t~a~~as~i~~-~~P~~~  117 (313)
                      +|..-.+.-+..+.+++..+.... +++.. +..+ +.-++...-|+++.....+....++...++.+..+.- -+-+..
T Consensus        29 s~~~as~i~~~~G~i~~~i~~~~~-~~~~~-~~~~-~~p~w~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~s  105 (138)
T PF04657_consen   29 SPLVASFISFGVGFILLLIILLIT-GRPSL-ASLS-SVPWWAYLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIAS  105 (138)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHh-ccccc-chhc-cCChHHhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence            599999999999998888877766 33222 2222 2222344567888778888888888888887776654 456666


Q ss_pred             HHHHHH----HhhhcccccccccccchhhHHHHHHhHH
Q 021354          118 FTLAVL----FRMEKLALRTLSTQAKIIGTMVSISGAL  151 (313)
Q Consensus       118 ~ll~~~----~~~E~~~~~~~~s~~~~~gi~l~~~G~~  151 (313)
                      .+++.+    .-|+|++++      |.+|+++.++|+.
T Consensus       106 l~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~  137 (138)
T PF04657_consen  106 LLIDHFGLFGAPKRPFSLR------RILGLALMIAGVI  137 (138)
T ss_pred             HHHHHccccCCCCCCCCHH------HHHHHHHHHHHHh
Confidence            677775    346666777      9999999999975

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=94.03  E-value=1.6  Score=39.65  Aligned_cols=248  Identities=10%  Similarity=0.104  Sum_probs=135.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CchhhhhhcchhhHHHHH
Q 021354           41 YVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACS-SPTLSSAISNLTPAFTFT  119 (313)
Q Consensus        41 ~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~gl~~t-~a~~as~i~~~~P~~~~l  119 (313)
                      ..+++-.|++-+.-=+++.-..  ...+ ++.+.|++...  ...+ +..+.+=..++++- +-..=.++=.-.++.+..
T Consensus        34 NLITFaqFlFia~eGlif~skf--~~~k-~kiplk~Y~i~--V~mF-F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~  107 (330)
T KOG1583|consen   34 NLITFAQFLFIATEGLIFTSKF--FTVK-PKIPLKDYAIT--VAMF-FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMI  107 (330)
T ss_pred             eehHHHHHHHHHHhceeeeccc--cccC-CCCchhhhhee--hhee-eeeeeeccceeeecccceEEEEEecCcHHHHHH
Confidence            5667777765554322221111  1122 55666765432  1111 11222222344432 222223334467888999


Q ss_pred             HHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCCCCCCCccccccC--CCCCCchhhHHHHHHH
Q 021354          120 LAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHSTNSLHWLMG--SPSVSNWVTGGFLLAA  197 (313)
Q Consensus       120 l~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~G~ll~l~  197 (313)
                      ++|++.|.|.+.+      |..++++.-+|+++-...+.++...          ++.++.++  ......|..|..+...
T Consensus       108 ~g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~----------~~~~l~~~~~~~~~~~w~iGi~lL~~  171 (330)
T KOG1583|consen  108 LGWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRS----------KLSGLDSGSAQSDFFWWLIGIALLVF  171 (330)
T ss_pred             HHHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhh----------hhcccccCcccccchHHHHHHHHHHH
Confidence            9999999998888      9999999999998766533332211          01111000  1122356789999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHHHHHHh--h------cCCC---CccccccChhhHHHHHHHHhh
Q 021354          198 QCFLLSIWSILLTQIINIYP-AELLVAFLYNLFAAVIAVPLCL--F------AEPD---LSLWRLKPDVALVSIVYSAFL  265 (313)
Q Consensus       198 aa~~~a~~~v~~k~~~~~~~-~~~~~t~~~~l~~~~~~~~~~~--~------~~~~---~~~~~~~~~~~~~~ll~lgv~  265 (313)
                      +.+.-|.-.+.|.+.-+++. ++-+..++.=+.+...++...-  .      ...+   .+.....-+..|.++++..+ 
T Consensus       172 al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L-  250 (330)
T KOG1583|consen  172 ALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL-  250 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH-
Confidence            99998888888877655442 3456777766555444333220  0      0000   00011112345555544432 


Q ss_pred             hhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          266 GPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       266 ~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      ..-+|----+-.-.+.++-.|+++..+--.+..+++.+.++.++++
T Consensus       251 ~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~  296 (330)
T KOG1583|consen  251 TQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTP  296 (330)
T ss_pred             HHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCH
Confidence            1112221122222455666799999999999999999999998875

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.94  E-value=2.1  Score=38.78  Aligned_cols=253  Identities=10%  Similarity=0.124  Sum_probs=139.1

Q ss_pred             HHHHHHHHHHHHHHHHhC-CCCH--HHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHHHHHHH
Q 021354           19 VECTTVGLNTLFKAAASK-GLSY--YVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGY   95 (313)
Q Consensus        19 ~~~~~g~~~~~~K~~l~~-~~~p--~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   95 (313)
                      .-+.+=.+..+.....+. ++.|  +.++..+++.=..+-+.-....+.++   +..++|...   .++.+-...+.+--
T Consensus        51 ~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~---r~iP~rtY~---~la~~t~gtmGLsn  124 (367)
T KOG1582|consen   51 VFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKR---RVIPWRTYV---ILAFLTVGTMGLSN  124 (367)
T ss_pred             HHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccc---eecchhHhh---hhHhhhhhccccCc
Confidence            334555566666655442 4666  34555555544322222111110222   234555432   33333223333222


Q ss_pred             HHhhccCchhhhhhcc---hhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhhhcCCccccCCCCCCCCC
Q 021354           96 TGIACSSPTLSSAISN---LTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVLYKGPTIFLGTSPSSTHS  172 (313)
Q Consensus        96 ~gl~~t~a~~as~i~~---~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~~~g~~~~~~~~~~~~~~  172 (313)
                      -++.|.+=- +-++.-   +.|+  .+.+.++-+.|..+.      ...+..+...|+++....+.              
T Consensus       125 ~SlgYLNYP-tQviFKccKliPV--miggifIqGkRY~v~------d~~aA~lm~lGli~FTLADs--------------  181 (367)
T KOG1582|consen  125 GSLGYLNYP-TQVIFKCCKLIPV--MIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLADS--------------  181 (367)
T ss_pred             CccccccCc-HHHHHHhhhhhhh--hheeeeeccccccHH------HHHHHHHHHHHHHhhhhccc--------------
Confidence            233333211 223333   3343  344566667776666      78888888899887665111              


Q ss_pred             CCccccccCCCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCh-hHHHHHHHHHHHHHHHHHHHhhcCCCCccccc
Q 021354          173 TNSLHWLMGSPSVSN-WVTGGFLLAAQCFLLSIWSILLTQIINIYPA-ELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRL  250 (313)
Q Consensus       173 ~~~~~~~~~~~~~~~-~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~-~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~  250 (313)
                                ..+.+ ...|..+.-.+-++=|+-.-.|.+..+.++. ..++.+++..+|.+.+...-...++-.+.|+.
T Consensus       182 ----------~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~f  251 (367)
T KOG1582|consen  182 ----------QTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTF  251 (367)
T ss_pred             ----------ccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHH
Confidence                      01122 2579888888888888888888877666542 35677888888888777766655443444431


Q ss_pred             ---cChhhHHHHHHHHhhhhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          251 ---KPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       251 ---~~~~~~~~ll~lgv~~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                         +|.......++.+. .+-++...-.-.++.-|+..++.+...--.++++++++++..+++.
T Consensus       252 caehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~  314 (367)
T KOG1582|consen  252 CAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTE  314 (367)
T ss_pred             HHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHH
Confidence               11111112111111 2222333333445777888889999999999999999999888763

>TIGR00803 nst UDP-galactose transporter

Probab=92.97  E-value=0.55  Score=41.11  Aligned_cols=62  Identities=11%  Similarity=0.090  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHH
Q 021354           84 SFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGAL  151 (313)
Q Consensus        84 g~~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~  151 (313)
                      .+.....+.+..+-++|.++..-+....+.++++.+++.++++|+++..      ++.|+.+.+.|+.
T Consensus       159 ~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~  220 (222)
T TIGR00803       159 GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATF  220 (222)
T ss_pred             HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeE
Confidence            3444566677888999999999999999999999999999999999999      9999999888754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=92.63  E-value=0.33  Score=42.92  Aligned_cols=72  Identities=24%  Similarity=0.306  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHh
Q 021354           77 LSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVV  154 (313)
Q Consensus        77 ~~~~~~~g~~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~  154 (313)
                      +..+.++++.+.+.|.|.+.-+.+-+|-.-+++..+--+|+.+.+.+++..+++.|      ||+|..+-+.|..+=.
T Consensus       241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADV  312 (337)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHh
Confidence            44466777777889999999999999988999999999999999999999999999      9999999998876533

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=92.22  E-value=0.48  Score=43.82  Aligned_cols=100  Identities=18%  Similarity=0.202  Sum_probs=68.8

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHhhcCh-hHHHHHHHHHHHHHHHHHHHhhcCCCCccccccChhhHHHHHHHHhh
Q 021354          187 NWVTGGFLLAAQCFLLSIWSILLTQIINIYPA-ELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFL  265 (313)
Q Consensus       187 ~~~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~-~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~lgv~  265 (313)
                      ++..|..+++.++++.+....+||+-..+.+. +.+-                   +.+..+. ... ..|+    .|+.
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~-------------------~~~~~~~-l~~-~~W~----~G~~   58 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA-------------------GSGGRSY-LRR-PLWW----IGLL   58 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-------------------cchhhHH-Hhh-HHHH----HHHH
Confidence            45799999999999999999999986555432 0000                   0000000 000 1122    2222


Q ss_pred             hhHHHHHHHHHHhhccCceeeecccchHHHHHHHHHHHHhcCcccc
Q 021354          266 GPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  311 (313)
Q Consensus       266 ~s~~~~~l~~~~l~~~~~~~vs~~~~l~Pv~a~l~~~~~l~E~l~~  311 (313)
                      ...++......++...+++.++++..+.-++..+++..++||+++.
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~  104 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTR  104 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchH
Confidence            3345556677788889999999999999999999999999999875

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=90.98  E-value=0.82  Score=34.45  Aligned_cols=47  Identities=21%  Similarity=0.400  Sum_probs=27.0

Q ss_pred             hhHHHHHHHHHHhhccCceee-ecccchHHHHHHHHHHHHhcCccccC
Q 021354          266 GPSFNTIIHTWGLRLKGPVYI-AIFKPLSVVIAAITGIIFLGDTLHLG  312 (313)
Q Consensus       266 ~s~~~~~l~~~~l~~~~~~~v-s~~~~l~Pv~a~l~~~~~l~E~l~~~  312 (313)
                      .-++++.++.+++|+.+.+.+ +...-+..+...+.|++++||++|+.
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~   85 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS   85 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH-------
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            445788999999999998887 44455889999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=90.64  E-value=3  Score=33.93  Aligned_cols=108  Identities=9%  Similarity=0.060  Sum_probs=72.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCCCccccccChhhHHHHHHHHhhhhHHHH
Q 021354          192 GFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNT  271 (313)
Q Consensus       192 ~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~lgv~~s~~~~  271 (313)
                      .++.+.+-.+-++......+..++..+|...+++....|.+.+.....+.++.  +.+...+..|+..+ -|++ ..+..
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~l-G~~~V   78 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLL-GVFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHH-HHHHH
Confidence            45677777888888888888887776679999999999999988888776542  12111112344432 3443 34455


Q ss_pred             HHHHHHhhccCceee-ecccchHHHHHHHHHHH
Q 021354          272 IIHTWGLRLKGPVYI-AIFKPLSVVIAAITGII  303 (313)
Q Consensus       272 ~l~~~~l~~~~~~~v-s~~~~l~Pv~a~l~~~~  303 (313)
                      ....+..++.|++.. .....-+-+.++++|.+
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~f  111 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHF  111 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence            568888899999864 44445566667777765

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.50  E-value=4.8  Score=33.22  Aligned_cols=134  Identities=12%  Similarity=-0.030  Sum_probs=69.6

Q ss_pred             HHHHHHHHHHHHHHH-HHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhhhhcCCCccCCCccHHHHHHHHHHHHHHHHHH
Q 021354           13 LSATVAVECTTVGLN-TLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQ   91 (313)
Q Consensus        13 ~l~l~~~~~~~g~~~-~~~K~~l~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   91 (313)
                      .+..+.+.++-.... +-.+..-.. =+|+.-.+.-+..+..++..+...+ +++.. .....+.-++.+.-|++|..+-
T Consensus         7 ll~~i~aG~~l~~Q~~iN~qL~~~~-~spl~As~isf~vGt~~L~~l~l~~-~~~~~-~a~~~~~pwW~~~GG~lGa~~v   83 (150)
T COG3238           7 LLFAILAGALLPLQAAINGRLARYL-GSPLLASLISFLVGTVLLLILLLIK-QGHPG-LAAVASAPWWAWIGGLLGAIFV   83 (150)
T ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHHHh-cCCCc-hhhccCCchHHHHccchhhhhh
Confidence            334444444333333 335554322 2699999999999998888777665 33222 2211222334445555554333


Q ss_pred             HHHHHHhhccCchh-hhhhcchhhHHHHHHHHH-HhhhcccccccccccchhhHHHHHHhHHH
Q 021354           92 IFGYTGIACSSPTL-SSAISNLTPAFTFTLAVL-FRMEKLALRTLSTQAKIIGTMVSISGALV  152 (313)
Q Consensus        92 ~~~~~gl~~t~a~~-as~i~~~~P~~~~ll~~~-~~~E~~~~~~~~s~~~~~gi~l~~~G~~l  152 (313)
                      ..-........++. ..+...-+-+...+++.+ +++++.   |..+..++.|+++.++|+++
T Consensus        84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~---~~~~~~r~lgi~L~l~gil~  143 (150)
T COG3238          84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPK---RPLNLPRILGILLVLAGILL  143 (150)
T ss_pred             hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCc---CCCCHHHHHHHHHHHHHHHH
Confidence            33333333333332 333334444555555544 333332   33344499999999999443

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=89.94  E-value=3  Score=38.56  Aligned_cols=139  Identities=19%  Similarity=0.194  Sum_probs=96.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHhhhhhhcCCC----ccCCCccHHHHHHHHHHHH
Q 021354           11 LLLSATVAVECTTVGLNTLFKAAASK-GLSYYVFVAYSYPLATLALLPLPLIFRNTT----TVVPSFKFSILSRIILLSF   85 (313)
Q Consensus        11 ~~~l~l~~~~~~~g~~~~~~K~~l~~-~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~   85 (313)
                      .++.++....+.-....+-.|...+. +.+-+.++.+--+++.+.+.......+|..    ..+.......+....+-++
T Consensus       157 ~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv  236 (314)
T KOG1444|consen  157 RGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV  236 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence            34566666666666666777777654 467788888888888877777665541211    0000011233455666677


Q ss_pred             HHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           86 IGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        86 ~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      +++.-+++-++-.+.+|+..-++.....=+.+.+...++.+++.++.      ..+|+.+++.|-++-..
T Consensus       237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHhh
Confidence            77777888888899999888888876666667777777889999988      99999999999876554

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=88.12  E-value=5.5  Score=37.72  Aligned_cols=137  Identities=18%  Similarity=0.208  Sum_probs=91.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHhhhhhh---cCCCccCCCccHHHHHHHHHH
Q 021354           10 ALLLSATVAVECTTVGLNTLFKAAASKG---LSYYVFVAYSYPLATLALLPLPLIF---RNTTTVVPSFKFSILSRIILL   83 (313)
Q Consensus        10 ~~~~l~l~~~~~~~g~~~~~~K~~l~~~---~~p~~~~~~R~~~a~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   83 (313)
                      ..+-++.+++++.||..-++.|.=.+.+   .|--.+-.+=-++..++++|.....   ++.+...|  +..+...++..
T Consensus       246 llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP--~~~q~~~vv~~  323 (416)
T KOG2765|consen  246 LLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELP--SSTQFSLVVFN  323 (416)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCC--CCceeEeeeHh
Confidence            4456778889999999999999754432   3333444444455566677654432   12222212  22334456777


Q ss_pred             HHHH-HHHHHHHHHHhhccCchhhhhhcc-hhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           84 SFIG-VLSQIFGYTGIACSSPTLSSAISN-LTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        84 g~~~-~~~~~~~~~gl~~t~a~~as~i~~-~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      ++++ +..-++|.+|.-.|++-.+++=.. +.|+ .++...++.+.++++.      .++|....++|-..+..
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPL-A~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~  390 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPL-AMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNI  390 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeH-HHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheec
Confidence            8888 788999999999999987776555 5675 4456777777777777      89999888888765443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=84.67  E-value=18  Score=33.55  Aligned_cols=135  Identities=16%  Similarity=0.206  Sum_probs=81.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCC----CCHHHHHHHHHHHHHHHHHhhhhhhcCCCccC---CCcc-------HHH
Q 021354           11 LLLSATVAVECTTVGLNTLFKAAASKG----LSYYVFVAYSYPLATLALLPLPLIFRNTTTVV---PSFK-------FSI   76 (313)
Q Consensus        11 ~~~l~l~~~~~~~g~~~~~~K~~l~~~----~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~---~~~~-------~~~   76 (313)
                      .++.....+.++=|.-|.+.+..++++    =+|++..+.-.....+.++|..+.. |.....   +...       .+.
T Consensus       164 ~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~f-EG~~~~~~s~~f~~~d~~~~~rv  242 (349)
T KOG1443|consen  164 EGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLF-EGLHLITSSSIFRFQDTGLILRV  242 (349)
T ss_pred             hhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHH-cccccchhhhHHHhcCccHHHHH
Confidence            356666677778888888887777642    2578887777777777777766655 432210   0011       111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHH
Q 021354           77 LSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALV  152 (313)
Q Consensus        77 ~~~~~~~g~~~~~~~~~~~~gl~~t~a~~as~i~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~l  152 (313)
                      ...+.+.|...++--...+.=+..|+.-..++...--=+.+.+++..+.+|+++.-      .|.|+.++..|+..
T Consensus       243 ~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~l------N~~Gl~i~~agi~~  312 (349)
T KOG1443|consen  243 IGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLL------NWLGLAICLAGILL  312 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhh------HHHHHHHHHHHHHH
Confidence            11222222222222222223334444444444444566788999999999999988      99999999999865

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=84.41  E-value=10  Score=31.37  Aligned_cols=112  Identities=12%  Similarity=0.087  Sum_probs=72.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhhcCCCCccccccChhhHHHHHHHHhhhhH
Q 021354          189 VTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPS  268 (313)
Q Consensus       189 ~~G~ll~l~aa~~~a~~~v~~k~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~lgv~~s~  268 (313)
                      .+..+..+.+-.+-....-+..|+.+...+|....++.++.|++.+..+.++.++.+. +....+..|+..+ -|+++. 
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~-~a~~~~~pwW~~~-GG~lGa-   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPG-LAAVASAPWWAWI-GGLLGA-   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCc-hhhccCCchHHHH-ccchhh-
Confidence            3556788888888888988888888888778899999999999999988877544322 2212222344322 233332 


Q ss_pred             HHHHHHHHHhhccCcee-eecccchHHHHHHHHHHH
Q 021354          269 FNTIIHTWGLRLKGPVY-IAIFKPLSVVIAAITGII  303 (313)
Q Consensus       269 ~~~~l~~~~l~~~~~~~-vs~~~~l~Pv~a~l~~~~  303 (313)
                      +--+.......|.|++. +.....-+-+.++++|-+
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~f  116 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHF  116 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhh
Confidence            23334666677887774 555555566666666654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	313
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.17
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.12
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.57
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	96.79

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.17  E-value=3e-06  Score=67.95  Aligned_cols=68  Identities=25%  Similarity=0.236  Sum_probs=50.6

Q ss_pred             HHHHHH-HHHHHHHHHHhhccCchhhhhh-cchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           82 LLSFIG-VLSQIFGYTGIACSSPTLSSAI-SNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        82 ~~g~~~-~~~~~~~~~gl~~t~a~~as~i-~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      ..+++. .+.+.++..++++.+++.+..+ .++.|+++.++++++++|+++++      +++|+++.++|++++..
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~------~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            345555 6788999999999999999888 79999999999999999999999      99999999999998775

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.12  E-value=5.9e-06  Score=63.74  Aligned_cols=68  Identities=25%  Similarity=0.236  Sum_probs=60.3

Q ss_pred             HHHHHH-HHHHHHHHHHhhccCchhhhhh-cchhhHHHHHHHHHHhhhcccccccccccchhhHHHHHHhHHHHhh
Q 021354           82 LLSFIG-VLSQIFGYTGIACSSPTLSSAI-SNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISGALVVVL  155 (313)
Q Consensus        82 ~~g~~~-~~~~~~~~~gl~~t~a~~as~i-~~~~P~~~~ll~~~~~~E~~~~~~~~s~~~~~gi~l~~~G~~ll~~  155 (313)
                      ..++.. ..++.++..++++.|.+.+..+ ..+.|+++.++++++++|+++++      |++|+++.+.|++++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~------~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            345555 6788899999999999999887 78999999999999999999999      99999999999987664

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.57  E-value=4.8e-05  Score=60.88  Aligned_cols=51  Identities=12%  Similarity=0.094  Sum_probs=37.3

Q ss_pred             HHhhhhHHHHHHHHHHhhccCceeeecc-cchHHHHHHHHHHHHhcCccccC
Q 021354          262 SAFLGPSFNTIIHTWGLRLKGPVYIAIF-KPLSVVIAAITGIIFLGDTLHLG  312 (313)
Q Consensus       262 lgv~~s~~~~~l~~~~l~~~~~~~vs~~-~~l~Pv~a~l~~~~~l~E~l~~~  312 (313)
                      +++++++++|.+|++++|+.+++++..+ ..+.|++++++|++++||++++.
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~   86 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP   86 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            5567888999999999999999999999 89999999999999999999874

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=96.79  E-value=0.0012  Score=50.70  Aligned_cols=51  Identities=12%  Similarity=0.094  Sum_probs=45.8

Q ss_pred             HHhhhhHHHHHHHHHHhhccCceeeecc-cchHHHHHHHHHHHHhcCccccC
Q 021354          262 SAFLGPSFNTIIHTWGLRLKGPVYIAIF-KPLSVVIAAITGIIFLGDTLHLG  312 (313)
Q Consensus       262 lgv~~s~~~~~l~~~~l~~~~~~~vs~~-~~l~Pv~a~l~~~~~l~E~l~~~  312 (313)
                      .++++.+++|.++.+++|+.+.+.+..+ ..+.|+.+++++++++||++|+.
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~   86 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP   86 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH
Confidence            4555678899999999999999999888 79999999999999999999863

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00