Citrus Sinensis ID: 021398

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310---
Protein Sequence
METGSSSDSRDKQKTLKGSDIDSMMPQIGPFVPRTEHNPRELRSWAKKTGFVSDFSGETTTDVSGKFDSAGLDVQRSHEHSRGGGSSPKIEIDPVLGRTKPNRGSEIEPDAEAGHGVRRNGNAGVLGFREGIVRGDNERRRVRDEAVLEDKVDERLNGSGPSGNGNGVPVPSVNSVEPKKEEGKDERDVQIDMYPGGEETADGGWHRQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSEHVI
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHcccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHcHHHHHccccEEcccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
metgsssdsrdkqktlkgsdidsmmpqigpfvprtehnpreLRSWAKKTGfvsdfsgetttdvsgkfdsagldvqrshehsrgggsspkieidpvlgrtkpnrgseiepdaeaghgvrrngnagvlgfregivrgdnerrrvrdeavledkvderlngsgpsgngngvpvpsvnsvepkkeegkderdvqidmypggeetadggwhrqpelrfglrdnrgwvPVIYYGLQHFLSlagslifipliivpamggtdkdTATVISTMLLVTGVTTTLQSYfgtrlplvqgssfvylaPALVIINAREYRNLSEHVI
Flexible Loop (DISEMBL)
metgsssdsrdkqktlkgsdidsmmpQIGPFVPRTEHNPRELRSWAKKTGFVSDFSGETTTDVSGKFDSAGLDVQrshehsrgggsspkieidpvlgrtKPNRGseiepdaeaghgvrrngnagvlgfregivrgdnerrrvrdeavledkvderlngsgpsgngngvpvpsvnsvepkkeegkderdvqidmypggeetadggwhrQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAReyrnlsehvi
Low Complexity Region (SEG)
METGSSSDSRDKQKTLKGSDIDSMMPQIGPFVPRTEHNPRELRSWAKKTGFVSDFSGETTTDVSGKFDSAGLDVQrshehsrgggssPKIEIDPVLGRTKPNRGSEIEPDAEAGHGVRRNGNAGVLGFREGIVRGDNERRRVRDEAVLEDKVDERLngsgpsgngngvpvpsvnsvEPKKEEGKDERDVQIDMYPGGEETADGGWHRQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVIStmllvtgvtttlQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSEHVI
Disordered region (IsUnstruct)
***************************************************************************************************************************GVLGFREGI***********************************************************************GWHRQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYR*******
Disordered Region (DISOPRED)
*******************************************SWAKKTGF******************************************************************************************************************************************************************GLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLS**V*
Disordered Region (DISEMBL)
**************TLKGSDIDSMMPQIGPFVPRTEHNPRELRSWAKKTGFVSDFSGETTTDVSGKFDSAG****************PKIEIDPVLGRTKPNRGSEIEPDAEAGHGVRRNGNAGVLGFREGIVRGDNERRRVRDEAVLEDKVDERLNGSGPSGNGNGVPVPSV*************RDVQIDMYPGGEETADGGWHRQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSEHVI
Disordered Region (DISPRO)
**********************SMMPQIGPFVPRTEHNPRELRSWAKKTGFVS*********************************************************************************************************************************************************RQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNL*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHoooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
METGSSSDSRDKQKTLKGSDIDSMMPQIGPFVPRTEHNPRELRSWAKKTGFVSDFSGETTTDVSGKFDSAGLDVQRSHEHSRGGGSSPKIEIDPVLGRTKPNRGSEIEPDAEAGHGVRRNGNAGVLGFREGIVRGDNERRRVRDEAVLEDKVDERLNGSGPSGNGNGVPVPSVNSVEPKKEEGKDERDVQIDMYPGGEETADGGWHRQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSEHVI
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	313	2.2.26 [Sep-21-2011]
Q6SZ87	709	Nucleobase-ascorbate tran	yes	no	0.760	0.335	0.467	3e-59
Q3E7D0	709	Nucleobase-ascorbate tran	no	no	0.760	0.335	0.388	2e-34
P93039	526	Nucleobase-ascorbate tran	no	no	0.316	0.188	0.424	5e-16
Q9SHZ3	520	Nucleobase-ascorbate tran	no	no	0.322	0.194	0.405	7e-15
Q3E956	419	Putative nucleobase-ascor	no	no	0.332	0.248	0.346	6e-14
Q0WPE9	538	Nucleobase-ascorbate tran	no	no	0.281	0.163	0.431	6e-14
Q41760	527	Nucleobase-ascorbate tran	N/A	no	0.281	0.166	0.431	8e-14
Q9WTW8	647	Solute carrier family 23	yes	no	0.319	0.154	0.352	7e-13
Q9EPR4	648	Solute carrier family 23	yes	no	0.319	0.154	0.352	7e-13
Q27GI3	532	Nucleobase-ascorbate tran	no	no	0.399	0.234	0.304	8e-13

>sp|Q6SZ87|NAT11_ARATH Nucleobase-ascorbate transporter 11 OS=Arabidopsis thaliana GN=NAT11 PE=2 SV=1

 Score =  228 bits (582), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/295 (46%), Positives = 176/295 (59%), Gaps = 57/295 (19%)

Query: 23  SMMPQIGPFVPRTEHNPRELRSWAKKTGFVSDFSGETTTDVSGKF-DSAGLDVQRSHEHS 81
           +   ++ PF+P+ + NPR+LRSWAKKTGFVSD+SGET+T    KF +S+  D+ +  +  
Sbjct: 32  AFFKRVEPFLPKKDLNPRDLRSWAKKTGFVSDYSGETSTSTRTKFGESSDFDLPKGRDQV 91

Query: 82  RGGGSSPKIEIDPVLGRTKPNRGSEIEPDAEAGHGVRRNGNAGVLGFREGIVRGDNERRR 141
              GSS K EIDP+LGR +P    EI                                  
Sbjct: 92  V-TGSSHKTEIDPILGRNRP----EI---------------------------------- 112

Query: 142 VRDEAVLEDKVDERLNGSGPSGNGNGVPVPSVNSVEPKKEE--GKDERDVQIDMY---PG 196
                       E + GS P          + N   P+ E   GK  +D++   Y    G
Sbjct: 113 ------------EHVTGSEPVSREEEERRLNRNEATPETENEGGKINKDLENGFYYPGGG 160

Query: 197 GEETADGGWHRQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKD 256
           GE + DG W +   ++FGLRDN G+VP+IYYGLQH+LSL GSL+FIPL+IVPAM G+DKD
Sbjct: 161 GESSEDGQWPKPILMKFGLRDNPGFVPLIYYGLQHYLSLVGSLVFIPLVIVPAMDGSDKD 220

Query: 257 TATVISTMLLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSEH 311
           TA+VISTMLL+TGVTT L  YFGTRLPLVQGSSFVYLAP LV+IN+ E+RNL+EH
Sbjct: 221 TASVISTMLLLTGVTTILHCYFGTRLPLVQGSSFVYLAPVLVVINSEEFRNLTEH 275

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E7D0|NAT12_ARATH Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3

 Score =  146 bits (368), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/268 (38%), Positives = 146/268 (54%), Gaps = 30/268 (11%)

Query: 44  SWAKKTGFVSDFSGETT-TDVSGKFDSAGLDVQRSHEHSRGGGSSPKIEIDPVLGRTKPN 102
           SWAKKTGF   FSGETT TD S       L V+   + ++     P +E      R  P 
Sbjct: 28  SWAKKTGFRPKFSGETTATDSSS--GQLSLPVRAKQQETQ-----PDLEAGQTRLRPPPP 80

Query: 103 RGSEIEPDAEAGHGVRRNGNAGVLGFREGIVRGDNERRRVRDEAVLEDKVDERLNGSGPS 162
             + +  + E     +        G     V+    +RR RD     D V  R NG  P 
Sbjct: 81  VSAAVT-NGETDKDKKEKPPPPPPGSVAVPVKDQPVKRR-RDS----DGVVGRSNG--PD 132

Query: 163 G-NGNGVPVPSVNSVEPKKEEGKDERDVQIDMYPGGEETADGGWHRQPELRFGLRDNRGW 221
           G NG+G         +P +  G+ E  V++      +   D    R   +++GLRD  G 
Sbjct: 133 GANGSG---------DPVRRPGRIEETVEVL----PQSMDDDLVARNLHMKYGLRDTPGL 179

Query: 222 VPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGTR 281
           VP+ +YGLQH+LS+ GSLI +PL+IVPAMGG+ ++ A V+ST+L V+G+TT L + FG+R
Sbjct: 180 VPIGFYGLQHYLSMLGSLILVPLVIVPAMGGSHEEVANVVSTVLFVSGITTLLHTSFGSR 239

Query: 282 LPLVQGSSFVYLAPALVIINAREYRNLS 309
           LPL+QG SFV+LAPAL IIN+ E++ L+
Sbjct: 240 LPLIQGPSFVFLAPALAIINSPEFQGLN 267

Arabidopsis thaliana (taxid: 3702)

>sp|P93039|NAT4_ARATH Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2

 Score = 85.5 bits (210), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 63/99 (63%)

Query: 207 RQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLL 266
           + P + F +  +  W   I  G QH++ + G+ + IP I+VP MGG D + A VI+T+L 
Sbjct: 16  QLPGVEFCVSSSPNWPEGIVLGFQHYIVMLGTTVIIPSILVPLMGGGDVEKAEVINTVLF 75

Query: 267 VTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREY 305
           V+G+ T LQS FG+RLP+V G+S+ YL PAL I  +  +
Sbjct: 76  VSGINTLLQSLFGSRLPVVMGASYAYLIPALYITFSYRF 114

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SHZ3|NAT1_ARATH Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1

 Score = 81.6 bits (200), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%)

Query: 210 ELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTG 269
           +L + +  N  W   +    Q+++ + G+  FIP ++VPAMGG+D D A VI T+L V G
Sbjct: 14  DLEYCIDSNPPWPETVLLAFQNYILMLGTSAFIPALLVPAMGGSDGDRARVIQTLLFVAG 73

Query: 270 VTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSE 310
           + T LQ+ FGTRLP V G S  Y+ P   IIN    + +S 
Sbjct: 74  IKTLLQALFGTRLPAVVGGSLAYVVPIAYIINDSSLQKISN 114

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E956|NAT9_ARATH Putative nucleobase-ascorbate transporter 9 OS=Arabidopsis thaliana GN=NAT9 PE=3 SV=1

 Score = 78.6 bits (192), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 61/104 (58%)

Query: 207 RQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLL 266
           + P +++ +     W+  +  G QH+L   G  + IP ++VP MGG D +   VI T+L 
Sbjct: 38  QLPGIQYCVNSPPPWLEAVVLGFQHYLLSLGITVLIPSLLVPLMGGGDAEKVKVIQTLLF 97

Query: 267 VTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSE 310
           V+G+TT  QS+FGTRLP++  +S+ Y+ P   II +  +   ++
Sbjct: 98  VSGLTTLFQSFFGTRLPVIASASYAYIIPITSIIYSTRFTYYTD 141

Arabidopsis thaliana (taxid: 3702)

>sp|Q0WPE9|NAT7_ARATH Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2

 Score = 78.6 bits (192), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 56/88 (63%)

Query: 221 WVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGT 280
           W   I  G QH+L + G+ + IP  +VP MGG +++ A ++ T+L V+G+ T LQS+FGT
Sbjct: 42  WPEAILLGFQHYLVMLGTTVLIPTYLVPQMGGGNEEKAKMVQTLLFVSGLNTLLQSFFGT 101

Query: 281 RLPLVQGSSFVYLAPALVIINAREYRNL 308
           RLP V G S+ Y+   L II A  Y ++
Sbjct: 102 RLPAVIGGSYTYVPTTLSIILAGRYSDI 129

Arabidopsis thaliana (taxid: 3702)

>sp|Q41760|LPE1_MAIZE Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2

 Score = 78.2 bits (191), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 54/88 (61%)

Query: 221 WVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGT 280
           W+  +  G QH+L + G+ + I  IIVP MGG   + A VI T+L ++G+ T LQ +FGT
Sbjct: 31  WITTVLVGFQHYLVMLGTTVLIATIIVPLMGGGHAEKAIVIQTILFLSGINTLLQVHFGT 90

Query: 281 RLPLVQGSSFVYLAPALVIINAREYRNL 308
           RLP V   S+ Y+ PA+ II +  Y  L
Sbjct: 91  RLPAVMSGSYTYIYPAVAIILSPRYALL 118

High affinity uric acid-xanthine transporter in A.nidulans. Binds, but cannot transport ascorbic acid.

Zea mays (taxid: 4577)

>sp|Q9WTW8|S23A2_RAT Solute carrier family 23 member 2 OS=Rattus norvegicus GN=Slc23a2 PE=2 SV=2

 Score = 74.7 bits (182), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 2/102 (1%)

Query: 207 RQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTAT--VISTM 264
           ++ ++ + + D   W   I+ GLQH+L+     I +P ++  AM   D   AT  +I T+
Sbjct: 84  QRSDMIYTIEDVPPWYLCIFLGLQHYLTCFSGTIAVPFLLADAMCVGDDQWATSQLIGTI 143

Query: 265 LLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYR 306
               G+TT LQ+ FG RLPL Q S+F +LAPA  I++  +++
Sbjct: 144 FFCVGITTLLQTTFGCRLPLFQASAFAFLAPARAILSLDKWK 185

Sodium/ascorbate cotransporter. Mediates electrogenic uptake of vitamin C, with a stoichiometry of 2 Na(+) for each ascorbate.

Rattus norvegicus (taxid: 10116)

>sp|Q9EPR4|S23A2_MOUSE Solute carrier family 23 member 2 OS=Mus musculus GN=Slc23a2 PE=1 SV=2

 Score = 74.7 bits (182), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 2/102 (1%)

Query: 207 RQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTAT--VISTM 264
           ++ ++ + + D   W   I+ GLQH+L+     I +P ++  AM   D   AT  +I T+
Sbjct: 85  QRSDMIYTIEDVPPWYLCIFLGLQHYLTCFSGTIAVPFLLADAMCVGDDQWATSQLIGTI 144

Query: 265 LLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYR 306
               G+TT LQ+ FG RLPL Q S+F +LAPA  I++  +++
Sbjct: 145 FFCVGITTLLQTTFGCRLPLFQASAFAFLAPARAILSLDKWK 186

Sodium/ascorbate cotransporter. Mediates electrogenic uptake of vitamin C, with a stoichiometry of 2 Na(+) for each ascorbate.

Mus musculus (taxid: 10090)

>sp|Q27GI3|NAT6_ARATH Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2

 Score = 74.7 bits (182), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 23/148 (15%)

Query: 165 GNGVPVPSVNSVEPKKEEGKDERDVQIDMYPGGEETADGGWHRQPELRFGLRDNRGWVPV 224
           G G P P  +  EP+    KD+                      P + + +     W   
Sbjct: 3   GGGAPAPKAD--EPQPHPPKDQL---------------------PNISYCITSPPPWPEA 39

Query: 225 IYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGTRLPL 284
           I  G QH+L + G+ + IP  +VP MGG  ++ A VI T+L V G+ T LQ+ FGTRLP 
Sbjct: 40  ILLGFQHYLVMLGTTVLIPTALVPQMGGGYEEKAKVIQTILFVAGINTLLQTLFGTRLPA 99

Query: 285 VQGSSFVYLAPALVIINAREYRNLSEHV 312
           V G+S+ ++   + II +  + + S  +
Sbjct: 100 VVGASYTFVPTTISIILSGRFSDTSNPI 127

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	313
255586649	756	purine permease, putative [Ricinus commu	0.974	0.403	0.606	2e-94
356566181	767	PREDICTED: nucleobase-ascorbate transpor	0.987	0.402	0.518	6e-82
449432962	771	PREDICTED: nucleobase-ascorbate transpor	0.984	0.399	0.522	2e-77
356531353	728	PREDICTED: nucleobase-ascorbate transpor	0.897	0.385	0.517	7e-73
357485507	716	Nucleobase-ascorbate transporter [Medica	0.808	0.353	0.532	2e-68
15144504	489	putative permease [Solanum lycopersicum]	0.884	0.566	0.424	5e-60
79499196	709	nucleobase-ascorbate transporter 11 [Ara	0.760	0.335	0.467	2e-57
4467111	703	putative protein [Arabidopsis thaliana]	0.760	0.338	0.467	3e-57
359496912	342	PREDICTED: nucleobase-ascorbate transpor	0.322	0.295	0.851	1e-43
297735949	318	unnamed protein product [Vitis vinifera]	0.322	0.317	0.851	2e-43

>gi|255586649|ref|XP_002533955.1| purine permease, putative [Ricinus communis] gi|223526068|gb|EEF28424.1| purine permease, putative [Ricinus communis]

 Score =  352 bits (902), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 197/325 (60%), Positives = 238/325 (73%), Gaps = 20/325 (6%)

Query: 1   METGSSSDSRDKQKTLK------GSDIDSMMPQIGPFVPRTEH-NPRELRSWAKKTGFVS 53
           METGSSS+S  K++  K       + + SM+P+I PFVPRT+H NPRELRSWAK+TGFVS
Sbjct: 1   METGSSSNSASKKEKQKEGANKTKTKLASMLPKIEPFVPRTDHLNPRELRSWAKRTGFVS 60

Query: 54  DFSGETTTDVSGKFDS-AGLDVQRSHEHSRGGGSSPKIEIDPVLGRTKPNRGSEIEPDAE 112
            FS ET    S KFD+ AG D+++  +H + GGSSPKIEIDPVLGRT+P RGSEIE D  
Sbjct: 61  TFSSETAASNSEKFDTRAGFDLEKGPDHHKNGGSSPKIEIDPVLGRTRPARGSEIESDLG 120

Query: 113 AGHGVRRNGNAGVLGFREGIVRGDNERRRVRDEAVLEDKVDER----LNGSGPSGNGNGV 168
           +     R GN     F  G++R +N +R   DE+VL  K  ER          + NG+G 
Sbjct: 121 SA---SRPGNWKERNF--GLLRDENNKRN-GDESVLRVKEQERKVELNGNGNANVNGSGN 174

Query: 169 PVPSVN-SVEPKKEEGKDERDVQIDMYPGG-EETADGGWHRQPELRFGLRDNRGWVPVIY 226
            +P +   +EPKKEE     D+ I+MYPGG  E  DGGWHRQ  +RFGLRDN G+VP+IY
Sbjct: 175 EIPLIAPGLEPKKEEENGGNDIGIEMYPGGGNEPDDGGWHRQSGMRFGLRDNPGFVPLIY 234

Query: 227 YGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGTRLPLVQ 286
           YGLQH+LSLAGSLIFIPLIIVPAMGGTDKDTA VIST+LL++G+TT L SYFGTRLPLVQ
Sbjct: 235 YGLQHYLSLAGSLIFIPLIIVPAMGGTDKDTAIVISTILLISGITTILHSYFGTRLPLVQ 294

Query: 287 GSSFVYLAPALVIINAREYRNLSEH 311
           GSSFV+LAPAL+I+NA+EYRNLSEH
Sbjct: 295 GSSFVFLAPALIIMNAQEYRNLSEH 319

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566181|ref|XP_003551313.1| PREDICTED: nucleobase-ascorbate transporter 11-like [Glycine max]

 Score =  310 bits (794), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 172/332 (51%), Positives = 225/332 (67%), Gaps = 23/332 (6%)

Query: 1   METGSSSDSRDKQKTLK---GSDIDSMMPQIGPFVPRTEHNPRELRSWAKKTGFVSDFSG 57
           METGSSS+  D+ K ++   G   D    ++ PFVPR++HNP+EL+SWAK+TGFVSD+SG
Sbjct: 1   METGSSSEFLDRGKAMRDGTGKRHDVSDAKVEPFVPRSDHNPKELKSWAKRTGFVSDYSG 60

Query: 58  ETTTDVSGKFDSAGLDVQRSHEHSRGGGSSPKIEIDPVLGRTKPNRGSEIEPDAEAGHGV 117
           E  T  +  FDS G DV +S +  R GGSSP IEIDPVLG  +PNR +EIEP   + H V
Sbjct: 61  EAGTSANENFDSVGFDV-KSVDDQREGGSSPTIEIDPVLGLARPNRDNEIEPVFVSKHRV 119

Query: 118 RRNGNAGVLGFRE---GIVRGDNERRRVRDE--AVLEDKVDERLNGSGPSGNGNGVPVPS 172
            R  N  VL  ++   G V   N+RR++ DE    L    D+++   G +G+ NG+ V +
Sbjct: 120 IRGENDRVLRSKDVWNGAVGSQNQRRKIGDEPGLALAGDGDKKVGLRG-NGDANGMTVST 178

Query: 173 --------VNSVEP-----KKEEGKDERDVQIDMYPGGEETADGGWHRQPELRFGLRDNR 219
                   V++V P     K+EEG  E DV+++++P GEE++   W     L++ + +N 
Sbjct: 179 NHDSNSHGVSAVAPLPEQKKEEEGVAEGDVKVNLFPEGEESSGREWQGSSGLKYSITENP 238

Query: 220 GWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFG 279
           G VP+IYYGLQH+LSL GSL+ IPLI+VP MGGTD DTA VISTML ++G+TT L SYFG
Sbjct: 239 GLVPLIYYGLQHYLSLVGSLVLIPLIMVPTMGGTDNDTANVISTMLFLSGITTILHSYFG 298

Query: 280 TRLPLVQGSSFVYLAPALVIINAREYRNLSEH 311
           TRLPLVQGSSFVYLAPALVIINA E+RNL+ H
Sbjct: 299 TRLPLVQGSSFVYLAPALVIINAEEFRNLTHH 330

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432962|ref|XP_004134267.1| PREDICTED: nucleobase-ascorbate transporter 11-like [Cucumis sativus] gi|449518994|ref|XP_004166520.1| PREDICTED: nucleobase-ascorbate transporter 11-like [Cucumis sativus]

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 176/337 (52%), Positives = 227/337 (67%), Gaps = 29/337 (8%)

Query: 1   METGSSSDSRDKQKTLKGSDIDSMMPQ---IGPFVPRTEHNPRELRSWAKKTGFVSDFSG 57
           M+TGS + ++ +    +G  + S++P    +  FVPRT+HNPRELRSWA++TGFVS FSG
Sbjct: 1   MDTGSRAMNKVETGK-RGGKLGSILPNDSTVDRFVPRTDHNPRELRSWARRTGFVSTFSG 59

Query: 58  ETTTDVSGKFDSAGLDVQRSHEHSRGGGSSPKIEIDPVLGRTKPNRGSEIEPDAEAGHGV 117
           E T+ V  K +S   D+++  E  RGGGSSPKIEIDP+LG+T+PNR  E+EP    G G 
Sbjct: 60  EATSSVGEKNESTRFDLEKGLER-RGGGSSPKIEIDPILGQTRPNREIEVEPVTGTGKGE 118

Query: 118 RRNGNAGVLGFREGIVRGDNERRRVRDEAVLE-DKVDERLNGSGPSG------------- 163
            +  N G L FR+G++R + ERRR+  E V+   K DER+  +G                
Sbjct: 119 MKTENEGGLRFRDGVLRSE-ERRRIGIEPVMGGAKEDERVVTNGKRSEKVDGAVNRQSDG 177

Query: 164 --NGNGVPVPSVN-SVEPKKEEGKDERDVQ------IDMYPGGEETADGGWHRQPELRFG 214
             NGN    P V  + EPKKE+G+D RD +      I+   G EE  +  W     L+ G
Sbjct: 178 DFNGNAHVAPFVTPAAEPKKEDGRDGRDGRDGRDEDINENAGEEEATEREWGGPSGLKLG 237

Query: 215 LRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTL 274
             D  G+VP+IYYGLQ +LSL GS++F+PLIIVPAMGGTDKDTATVIST+LLV+G+TT L
Sbjct: 238 PTDYPGYVPLIYYGLQQYLSLVGSVVFMPLIIVPAMGGTDKDTATVISTLLLVSGITTIL 297

Query: 275 QSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSEH 311
            SYFGTRLPLVQGSSFVYLAPAL+I+NA+EYRNL+EH
Sbjct: 298 HSYFGTRLPLVQGSSFVYLAPALIIMNAQEYRNLTEH 334

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531353|ref|XP_003534242.1| PREDICTED: nucleobase-ascorbate transporter 11-like [Glycine max]

 Score =  280 bits (716), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 166/321 (51%), Positives = 210/321 (65%), Gaps = 40/321 (12%)

Query: 1   METGSSSDS--RDKQKTLKGSD--------IDSMMPQIGPFVPRTEHNPRELRSWAKKTG 50
           METGS+S+S  R+   +++GS         +     ++ PFVPR+EHNPRELRSWAK+TG
Sbjct: 1   METGSNSESLNRNVAMSVRGSTGKKKQQGGVTLAGKKVDPFVPRSEHNPRELRSWAKRTG 60

Query: 51  FVSDFSGETTTDVSGKFDSAGLDVQRSHEHSRGGGSSPKIEIDPVLGRTKPNRGSEIEPD 110
           FVSD+SGE  +  S KF++    ++R     RGGGSSPKIEIDPV+GRT+ N     E +
Sbjct: 61  FVSDYSGEAGSSGSAKFEA----LER-----RGGGSSPKIEIDPVVGRTRQN-----EIE 106

Query: 111 AEAGHGVRRNGNAGVLGFREGIVRGDNERRRVRDEAVLEDKVDERLNGSGPSGNGNGVPV 170
            E   G  R  N  VL         D   R+ ++    E KV    NG+G         V
Sbjct: 107 QETHGGAMRGENGAVL---------DGRGRKEKENEGCERKVGFNGNGNGHG-------V 150

Query: 171 PSVNSVEPKKEEGKDERDVQIDMYPGGEETADGGWHRQPELRFGLRDNRGWVPVIYYGLQ 230
            +V  V  +KE  +   DV++ +   GEE ADGGW     L+ GL++N G VP+IYYGLQ
Sbjct: 151 SAVAPVNEEKEGEEGNGDVKVSVLHEGEEVADGGWQGPLGLKCGLKENPGIVPLIYYGLQ 210

Query: 231 HFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGTRLPLVQGSSF 290
           H+LSL GSL+ IPL++VP MGGTDKDTATVIST+L ++G+TT L SYFGTRLPLVQGSSF
Sbjct: 211 HYLSLVGSLVLIPLVMVPVMGGTDKDTATVISTILFLSGITTILHSYFGTRLPLVQGSSF 270

Query: 291 VYLAPALVIINAREYRNLSEH 311
           VYLAPALVIINA+EYRNL+EH
Sbjct: 271 VYLAPALVIINAQEYRNLTEH 291

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357485507|ref|XP_003613041.1| Nucleobase-ascorbate transporter [Medicago truncatula] gi|355514376|gb|AES95999.1| Nucleobase-ascorbate transporter [Medicago truncatula]

 Score =  265 bits (677), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 157/295 (53%), Positives = 192/295 (65%), Gaps = 42/295 (14%)

Query: 26  PQIGPFVPRTEHNPRELRSWAKKTGFVSDFSGETTTDVSGKFDSAGLDVQRSHEHSRGGG 85
           P++ PFVP+T +NPRELRSWAKKTGFVSD+SGE  T  S KF+         H   RG  
Sbjct: 7   PKVAPFVPKTGYNPRELRSWAKKTGFVSDYSGEAGTSGSEKFEPF-------HHRGRGSS 59

Query: 86  SSPKIEIDPVLGRTKPNRGSEIEPDAEAG---HGVRRNGNAGVLGFREGIVRGDNERRRV 142
           SSPKIEIDP        RG EI+P ++ G     VR+  N  VL      + GD ER   
Sbjct: 60  SSPKIEIDP-------TRGVEIQPASQGGVLEENVRKE-NEPVLP-----LNGDGER--- 103

Query: 143 RDEAVLEDKVDERLNGSGPSGNGNGVPVPSVNSVEPKKEEGKDER------DVQIDMYPG 196
                   KV  R NG   +GNG      S  +V P  EE  +E       +V+++++P 
Sbjct: 104 --------KVGLRGNGVNVNGNGGNGHGVS--AVAPVTEEKDEENVIHGDGEVKVNVFPE 153

Query: 197 GEETADGGWHRQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKD 256
           G +  DGGW    EL+ GL++N G+V +IYYGLQH+LSLAGSL+ IPL++VP MGGTDKD
Sbjct: 154 GVDFGDGGWKGPSELKCGLKENPGFVALIYYGLQHYLSLAGSLVLIPLVMVPIMGGTDKD 213

Query: 257 TATVISTMLLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSEH 311
           TATVISTML ++G+TT L  YFGTRLPLVQGSSFVYLAPALVIINA+EYRNL+EH
Sbjct: 214 TATVISTMLFLSGITTILHCYFGTRLPLVQGSSFVYLAPALVIINAQEYRNLTEH 268

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15144504|gb|AAK84471.1| putative permease [Solanum lycopersicum]

 Score =  237 bits (605), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 151/356 (42%), Positives = 202/356 (56%), Gaps = 79/356 (22%)

Query: 26  PQIGPFVPRTEHNPRELRSWAKKTGFVSD-FSGETT---------------TDVSGKFDS 69
           P+I PFVP+  ++PREL+SWAK+TGFVS  FSGET                 +VS   ++
Sbjct: 13  PKIEPFVPKKGYDPRELKSWAKRTGFVSTTFSGETERGGGHSRRDFDNGRDLNVSSN-EN 71

Query: 70  AGLDVQRSHEHSRGGGSSPKIEIDPVLGRTKPNRGSEIEPDAEAGHGVRRNGNAGVLGFR 129
            G D++R    +     SPKIE+DP+LGR + NRG EIEP + +      N      G  
Sbjct: 72  VGFDLERGVNKTET--VSPKIELDPILGRAR-NRGVEIEPISGS------NNEGLRNGRG 122

Query: 130 EGIVRGDNERRRVRDEAVLEDKVDERLNGSGPSGNGN---------------GVPVPSVN 174
            G  +G+N  RR   E +L    +ER +    +GN                   P   V 
Sbjct: 123 RGRGKGENLGRRTEMEPILRGHNEERKDARNENGNDGDSANGAVNGNGNGHIAQPATPVT 182

Query: 175 SVEPKKEEGKDERDVQIDMYPGGEETADGGWHRQPELRFGLRDNRG---------W---- 221
            V P+K++G  + +V + +YP GE+ + GGWH+ P ++ GLR+N G         W    
Sbjct: 183 EV-PRKDDGNVDEEVGMGIYPNGEDPSYGGWHQSPRMKCGLRENPGVDPPGMHYCWRIQH 241

Query: 222 ------------------------VPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDT 257
                                   VP+++YGLQH+LSLAGSLIFIPLI VP MGG+DKDT
Sbjct: 242 APANIFEGSEQHRSSNNVPSENTRVPLMFYGLQHYLSLAGSLIFIPLITVPTMGGSDKDT 301

Query: 258 ATVISTMLLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSEHVI 313
           A V+ST+LL++G+TT L SYFGTRLPLVQGSSFVYLAPALVI+N+ EYRNL++H +
Sbjct: 302 ADVVSTVLLLSGLTTILHSYFGTRLPLVQGSSFVYLAPALVIMNSEEYRNLADHYL 357

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79499196|ref|NP_195518.2| nucleobase-ascorbate transporter 11 [Arabidopsis thaliana] gi|75128428|sp|Q6SZ87.1|NAT11_ARATH RecName: Full=Nucleobase-ascorbate transporter 11; Short=AtNAT11 gi|38350521|gb|AAR18373.1| nucleobase-ascorbate transporter 11 [Arabidopsis thaliana] gi|332661467|gb|AEE86867.1| nucleobase-ascorbate transporter 11 [Arabidopsis thaliana]

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/295 (46%), Positives = 176/295 (59%), Gaps = 57/295 (19%)

Query: 23  SMMPQIGPFVPRTEHNPRELRSWAKKTGFVSDFSGETTTDVSGKF-DSAGLDVQRSHEHS 81
           +   ++ PF+P+ + NPR+LRSWAKKTGFVSD+SGET+T    KF +S+  D+ +  +  
Sbjct: 32  AFFKRVEPFLPKKDLNPRDLRSWAKKTGFVSDYSGETSTSTRTKFGESSDFDLPKGRDQV 91

Query: 82  RGGGSSPKIEIDPVLGRTKPNRGSEIEPDAEAGHGVRRNGNAGVLGFREGIVRGDNERRR 141
              GSS K EIDP+LGR +P    EI                                  
Sbjct: 92  V-TGSSHKTEIDPILGRNRP----EI---------------------------------- 112

Query: 142 VRDEAVLEDKVDERLNGSGPSGNGNGVPVPSVNSVEPKKEE--GKDERDVQIDMY---PG 196
                       E + GS P          + N   P+ E   GK  +D++   Y    G
Sbjct: 113 ------------EHVTGSEPVSREEEERRLNRNEATPETENEGGKINKDLENGFYYPGGG 160

Query: 197 GEETADGGWHRQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKD 256
           GE + DG W +   ++FGLRDN G+VP+IYYGLQH+LSL GSL+FIPL+IVPAM G+DKD
Sbjct: 161 GESSEDGQWPKPILMKFGLRDNPGFVPLIYYGLQHYLSLVGSLVFIPLVIVPAMDGSDKD 220

Query: 257 TATVISTMLLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSEH 311
           TA+VISTMLL+TGVTT L  YFGTRLPLVQGSSFVYLAP LV+IN+ E+RNL+EH
Sbjct: 221 TASVISTMLLLTGVTTILHCYFGTRLPLVQGSSFVYLAPVLVVINSEEFRNLTEH 275

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4467111|emb|CAB37545.1| putative protein [Arabidopsis thaliana] gi|7270788|emb|CAB80470.1| putative protein [Arabidopsis thaliana]

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/295 (46%), Positives = 176/295 (59%), Gaps = 57/295 (19%)

Query: 23  SMMPQIGPFVPRTEHNPRELRSWAKKTGFVSDFSGETTTDVSGKF-DSAGLDVQRSHEHS 81
           +   ++ PF+P+ + NPR+LRSWAKKTGFVSD+SGET+T    KF +S+  D+ +  +  
Sbjct: 32  AFFKRVEPFLPKKDLNPRDLRSWAKKTGFVSDYSGETSTSTRTKFGESSDFDLPKGRDQV 91

Query: 82  RGGGSSPKIEIDPVLGRTKPNRGSEIEPDAEAGHGVRRNGNAGVLGFREGIVRGDNERRR 141
              GSS K EIDP+LGR +P    EI                                  
Sbjct: 92  V-TGSSHKTEIDPILGRNRP----EI---------------------------------- 112

Query: 142 VRDEAVLEDKVDERLNGSGPSGNGNGVPVPSVNSVEPKKEE--GKDERDVQIDMY---PG 196
                       E + GS P          + N   P+ E   GK  +D++   Y    G
Sbjct: 113 ------------EHVTGSEPVSREEEERRLNRNEATPETENEGGKINKDLENGFYYPGGG 160

Query: 197 GEETADGGWHRQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKD 256
           GE + DG W +   ++FGLRDN G+VP+IYYGLQH+LSL GSL+FIPL+IVPAM G+DKD
Sbjct: 161 GESSEDGQWPKPILMKFGLRDNPGFVPLIYYGLQHYLSLVGSLVFIPLVIVPAMDGSDKD 220

Query: 257 TATVISTMLLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSEH 311
           TA+VISTMLL+TGVTT L  YFGTRLPLVQGSSFVYLAP LV+IN+ E+RNL+EH
Sbjct: 221 TASVISTMLLLTGVTTILHCYFGTRLPLVQGSSFVYLAPVLVVINSEEFRNLTEH 275

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496912|ref|XP_003635369.1| PREDICTED: nucleobase-ascorbate transporter 11-like, partial [Vitis vinifera]

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 86/101 (85%), Positives = 98/101 (97%)

Query: 211 LRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGV 270
           ++ GLR+N G+VP+IYYGLQH+LSLAGS+IFIPL+IVPAMGGTDKDTATVISTMLLVTG+
Sbjct: 1   MKCGLRENPGFVPLIYYGLQHYLSLAGSIIFIPLVIVPAMGGTDKDTATVISTMLLVTGI 60

Query: 271 TTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSEH 311
           TT LQSYFGTRLPLVQGSSFVYLAPALVIIN++EYRNL+EH
Sbjct: 61  TTILQSYFGTRLPLVQGSSFVYLAPALVIINSQEYRNLTEH 101

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735949|emb|CBI23526.3| unnamed protein product [Vitis vinifera]

 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 86/101 (85%), Positives = 98/101 (97%)

Query: 211 LRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGV 270
           ++ GLR+N G+VP+IYYGLQH+LSLAGS+IFIPL+IVPAMGGTDKDTATVISTMLLVTG+
Sbjct: 1   MKCGLRENPGFVPLIYYGLQHYLSLAGSIIFIPLVIVPAMGGTDKDTATVISTMLLVTGI 60

Query: 271 TTTLQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSEH 311
           TT LQSYFGTRLPLVQGSSFVYLAPALVIIN++EYRNL+EH
Sbjct: 61  TTILQSYFGTRLPLVQGSSFVYLAPALVIINSQEYRNLTEH 101

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	313
TAIR|locus:2120953	709	AT4G38050 [Arabidopsis thalian	0.431	0.190	0.594	6e-56
TAIR|locus:2042036	709	NAT12 "nucleobase-ascorbate tr	0.412	0.181	0.436	2.7e-31
TAIR|locus:2031085	526	AT1G49960 [Arabidopsis thalian	0.290	0.173	0.395	1.8e-11
TAIR|locus:2060076	520	AT2G05760 [Arabidopsis thalian	0.325	0.196	0.349	7.6e-11
FB|FBgn0037807	573	CG6293 [Drosophila melanogaste	0.316	0.172	0.306	1.5e-09
TAIR|locus:2202700	538	NAT7 "nucleobase-ascorbate tra	0.281	0.163	0.363	1.8e-09
TAIR|locus:2145507	419	AT5G25420 [Arabidopsis thalian	0.309	0.231	0.309	1.9e-09
TAIR|locus:2040874	524	AT2G34190 [Arabidopsis thalian	0.290	0.173	0.340	8.9e-09
TAIR|locus:2158829	528	AT5G49990 [Arabidopsis thalian	0.373	0.221	0.256	3.4e-08
TAIR|locus:2170783	532	AT5G62890 [Arabidopsis thalian	0.332	0.195	0.298	6e-08

TAIR|locus:2120953 AT4G38050 [Arabidopsis thaliana (taxid:3702)]

 Score = 417 (151.9 bits), Expect = 6.0e-56, Sum P(2) = 6.0e-56
 Identities = 82/138 (59%), Positives = 101/138 (73%)

Query:   177 EPKKEEGKDERDVQIDMY-PGG--EETADGGWHRQPELRFGLRDNRGWVPVIYYGLQHFL 233
             E + E GK  +D++   Y PGG  E + DG W +   ++FGLRDN G+VP+IYYGLQH+L
Sbjct:   138 ETENEGGKINKDLENGFYYPGGGGESSEDGQWPKPILMKFGLRDNPGFVPLIYYGLQHYL 197

Query:   234 SLAGSLIFIPLIIVPAMGGTDKDTATVISXXXXXXXXXXXXQSYFGTRLPLVQGSSFVYL 293
             SL GSL+FIPL+IVPAM G+DKDTA+VIS              YFGTRLPLVQGSSFVYL
Sbjct:   198 SLVGSLVFIPLVIVPAMDGSDKDTASVISTMLLLTGVTTILHCYFGTRLPLVQGSSFVYL 257

Query:   294 APALVIINAREYRNLSEH 311
             AP LV+IN+ E+RNL+EH
Sbjct:   258 APVLVVINSEEFRNLTEH 275

GO:0005215 "transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2042036 NAT12 "nucleobase-ascorbate transporter 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 2.7e-31, Sum P(2) = 2.7e-31
 Identities = 58/133 (43%), Positives = 85/133 (63%)

Query:   177 EPKKEEGKDERDVQIDMYPGGEETADGGWHRQPELRFGLRDNRGWVPVIYYGLQHFLSLA 236
             +P +  G+ E  V++   P  +   D    R   +++GLRD  G VP+ +YGLQH+LS+ 
Sbjct:   139 DPVRRPGRIEETVEV--LP--QSMDDDLVARNLHMKYGLRDTPGLVPIGFYGLQHYLSML 194

Query:   237 GSLIFIPLIIVPAMGGTDKDTATVISXXXXXXXXXXXXQSYFGTRLPLVQGSSFVYLAPA 296
             GSLI +PL+IVPAMGG+ ++ A V+S             + FG+RLPL+QG SFV+LAPA
Sbjct:   195 GSLILVPLVIVPAMGGSHEEVANVVSTVLFVSGITTLLHTSFGSRLPLIQGPSFVFLAPA 254

Query:   297 LVIINAREYRNLS 309
             L IIN+ E++ L+
Sbjct:   255 LAIINSPEFQGLN 267

GO:0005215 "transporter activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2031085 AT1G49960 [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 1.8e-11, P = 1.8e-11
 Identities = 36/91 (39%), Positives = 51/91 (56%)

Query:   209 PELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISXXXXXX 268
             P + F +  +  W   I  G QH++ + G+ + IP I+VP MGG D + A VI+      
Sbjct:    18 PGVEFCVSSSPNWPEGIVLGFQHYIVMLGTTVIIPSILVPLMGGGDVEKAEVINTVLFVS 77

Query:   269 XXXXXXQSYFGTRLPLVQGSSFVYLAPALVI 299
                   QS FG+RLP+V G+S+ YL PAL I
Sbjct:    78 GINTLLQSLFGSRLPVVMGASYAYLIPALYI 108

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2060076 AT2G05760 [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 7.6e-11, P = 7.6e-11
 Identities = 36/103 (34%), Positives = 53/103 (51%)

Query:   210 ELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISXXXXXXX 269
             +L + +  N  W   +    Q+++ + G+  FIP ++VPAMGG+D D A VI        
Sbjct:    14 DLEYCIDSNPPWPETVLLAFQNYILMLGTSAFIPALLVPAMGGSDGDRARVIQTLLFVAG 73

Query:   270 XXXXXQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLS-EH 311
                  Q+ FGTRLP V G S  Y+ P   IIN    + +S +H
Sbjct:    74 IKTLLQALFGTRLPAVVGGSLAYVVPIAYIINDSSLQKISNDH 116

GO:0005215 "transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

FB|FBgn0037807 CG6293 [Drosophila melanogaster (taxid:7227)]

 Score = 164 (62.8 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 31/101 (30%), Positives = 56/101 (55%)

Query:   208 QPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDT--ATVISXXX 265
             +P+L + + DN  W   I+   QH+L++ G+++ IP I+ PA+  +D+D     +IS   
Sbjct:    32 KPQLLYAINDNPPWYLSIFLAFQHYLTMIGAIVSIPFILTPALCMSDEDANRGIIISTMI 91

Query:   266 XXXXXXXXXQSYFGTRLPLVQGSSFVYLAPALVIINAREYR 306
                      Q+ +G RLP+VQG +  +L P L I+   +++
Sbjct:    92 FVTGIVTYFQATWGVRLPIVQGGTISFLVPTLAILALPQWK 132

GO:0008520 "L-ascorbate:sodium symporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2202700 NAT7 "nucleobase-ascorbate transporter 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 32/88 (36%), Positives = 47/88 (53%)

Query:   221 WVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISXXXXXXXXXXXXQSYFGT 280
             W   I  G QH+L + G+ + IP  +VP MGG +++ A ++             QS+FGT
Sbjct:    42 WPEAILLGFQHYLVMLGTTVLIPTYLVPQMGGGNEEKAKMVQTLLFVSGLNTLLQSFFGT 101

Query:   281 RLPLVQGSSFVYLAPALVIINAREYRNL 308
             RLP V G S+ Y+   L II A  Y ++
Sbjct:   102 RLPAVIGGSYTYVPTTLSIILAGRYSDI 129

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2145507 AT5G25420 [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 30/97 (30%), Positives = 49/97 (50%)

Query:   209 PELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISXXXXXX 268
             P +++ +     W+  +  G QH+L   G  + IP ++VP MGG D +   VI       
Sbjct:    40 PGIQYCVNSPPPWLEAVVLGFQHYLLSLGITVLIPSLLVPLMGGGDAEKVKVIQTLLFVS 99

Query:   269 XXXXXXQSYFGTRLPLVQGSSFVYLAPALVIINAREY 305
                   QS+FGTRLP++  +S+ Y+ P   II +  +
Sbjct:   100 GLTTLFQSFFGTRLPVIASASYAYIIPITSIIYSTRF 136

GO:0005215 "transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2040874 AT2G34190 [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 8.9e-09, P = 8.9e-09
 Identities = 31/91 (34%), Positives = 46/91 (50%)

Query:   211 LRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISXXXXXXXX 270
             L + +  N  W   I  G +H++   G+ + IP I+VP MGG D D   V+         
Sbjct:    20 LEYCIDSNPPWGEAIALGFEHYILALGTAVMIPSILVPMMGGDDGDKVRVVQTLLFLQGV 79

Query:   271 XXXXQSYFGTRLPLVQGSSFVYLAPALVIIN 301
                 Q+ FGTRLP V G S+ ++ P + II+
Sbjct:    80 NTLLQTLFGTRLPTVIGGSYAFMVPIISIIH 110

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2158829 AT5G49990 [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 3.4e-08, P = 3.4e-08
 Identities = 30/117 (25%), Positives = 59/117 (50%)

Query:   196 GGEETADGGWHRQPELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDK 255
             GG+        + P++ + +     W   +  G QH+L + G+ + IP  +VP MGG ++
Sbjct:     7 GGDPLPHPPKEQLPDISYCITSPPPWPEAVLLGFQHYLVMLGTTVLIPSALVPQMGGRNE 66

Query:   256 DTATVISXXXXXXXXXXXXQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSEHV 312
             + A +I             Q+ FGTRLP V G+S+ ++   + I+ +  + ++++ V
Sbjct:    67 EKAKLIQTILFVAGLNTLLQTVFGTRLPAVIGASYTFVPVTISIMLSGRFNDVADPV 123

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

TAIR|locus:2170783 AT5G62890 [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 6.0e-08, P = 6.0e-08
 Identities = 31/104 (29%), Positives = 51/104 (49%)

Query:   209 PELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISXXXXXX 268
             P + + +     W   I  G QH+L + G+ + IP  +VP MGG  ++ A VI       
Sbjct:    24 PNISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGYEEKAKVIQTILFVA 83

Query:   269 XXXXXXQSYFGTRLPLVQGSSFVYLAPALVIINAREYRNLSEHV 312
                   Q+ FGTRLP V G+S+ ++   + II +  + + S  +
Sbjct:    84 GINTLLQTLFGTRLPAVVGASYTFVPTTISIILSGRFSDTSNPI 127

GO:0005215 "transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00011817001 SubName- Full=Chromosome undetermined scaffold_340, whole genome shotgun sequence; (763 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	313
COG2233	451	COG2233, UraA, Xanthine/uracil permeases [Nucleoti	9e-14
TIGR03173	406	TIGR03173, pbuX, xanthine permease	1e-13
pfam00860	389	pfam00860, Xan_ur_permease, Permease family	2e-12
TIGR00801	412	TIGR00801, ncs2, uracil-xanthine permease	4e-08
PRK10720	428	PRK10720, PRK10720, uracil transporter; Provisiona	0.001

>gnl|CDD|225142 COG2233, UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism]

 Score = 71.1 bits (175), Expect = 9e-14
 Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 4/76 (5%)

Query: 228 GLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQS----YFGTRLP 283
           GLQH L++ G+ + +PL++  A+G + +DTA +IS  LL +G+ T LQ       G+ LP
Sbjct: 22  GLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLP 81

Query: 284 LVQGSSFVYLAPALVI 299
              GSSF ++AP + I
Sbjct: 82  SYLGSSFAFVAPMIAI 97

Length = 451

>gnl|CDD|234136 TIGR03173, pbuX, xanthine permease

 Score = 70.2 bits (173), Expect = 1e-13
 Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 4/76 (5%)

Query: 228 GLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSY----FGTRLP 283
           GLQH L++    + +PLI+  A+G + + TA +IS  L   G+ T +Q+     FG RLP
Sbjct: 1   GLQHVLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLP 60

Query: 284 LVQGSSFVYLAPALVI 299
           +VQG SF  + P + I
Sbjct: 61  VVQGVSFAAVGPMIAI 76

All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases. Length = 406

>gnl|CDD|216158 pfam00860, Xan_ur_permease, Permease family

 Score = 66.5 bits (163), Expect = 2e-12
 Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 2/76 (2%)

Query: 225 IYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSY-FGTRLP 283
           +  GLQH L++  + I +PL++  A+G   +D A +IS   L +G+ T LQ+  FG RLP
Sbjct: 4   LLLGLQHLLAMFAATIVVPLLVGDALGLGAEDLAQLISATFLASGIGTLLQTLIFGIRLP 63

Query: 284 LVQGSSFVYLAPALVI 299
           +  GSSF ++  AL+I
Sbjct: 64  IYLGSSFAFV-TALMI 78

This family includes permeases for diverse substrates such as xanthine, uracil, and vitamin C. However many members of this family are functionally uncharacterized and may transport other substrates. Members of this family have ten predicted transmembrane helices. Length = 389

>gnl|CDD|233133 TIGR00801, ncs2, uracil-xanthine permease

 Score = 53.8 bits (130), Expect = 4e-08
 Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 6/79 (7%)

Query: 225 IYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGT---- 280
           I  GLQH L++ G  + +PL++  A+G +  +T  ++ST LL +G+ T LQ  F T    
Sbjct: 8   IVLGLQHLLAMFGGTVLVPLLVGLALGLS-AETQYLVSTSLLTSGIGTLLQ-LFRTGGVI 65

Query: 281 RLPLVQGSSFVYLAPALVI 299
            LP   GSSF +++P + I
Sbjct: 66  GLPSYLGSSFAFVSPMIAI 84

The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40) Most of the functionally characterized members of the NCS2 family are transporters specific for nucleobases including both purines and pyrimidines. However, two closely related rat members of the family, SVCT1 and SVCT2, localized to different tissues of the body, cotransport L-ascorbate and Na+ with a high degree of specificity and high affinity for the vitamin. The NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39) [Transport and binding proteins, Nucleosides, purines and pyrimidines]. Length = 412

>gnl|CDD|236744 PRK10720, PRK10720, uracil transporter; Provisional

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 16/75 (21%)

Query: 229 LQHFLSLAGSLIFIPLI--IVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGT-RLPLV 285
           LQH  ++ G+ + +P++  I PA             T+LL  G+ T L  +    ++P  
Sbjct: 21  LQHLFAMFGATVLVPILFHINPA-------------TVLLFNGIGTLLYLFICKGKIPAY 67

Query: 286 QGSSFVYLAPALVII 300
            GSSF +++P L+++
Sbjct: 68  LGSSFAFISPVLLLL 82

Length = 428

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	313
KOG1292	510	consensus Xanthine/uracil transporters [Nucleotide	99.88
COG2233	451	UraA Xanthine/uracil permeases [Nucleotide transpo	99.82
PRK11412	433	putative uracil/xanthine transporter; Provisional	99.81
PRK10720	428	uracil transporter; Provisional	99.75
TIGR00801	415	ncs2 uracil-xanthine permease. NCS2 family appears	99.71
TIGR03616	429	RutG pyrimidine utilization transport protein G. T	99.71
TIGR03173	406	pbuX xanthine permease. All the seed members of th	99.57
PF00860	389	Xan_ur_permease: Permease family; InterPro: IPR006	99.49
TIGR00843	395	benE benzoate transporter. The benzoate transporte	96.97

>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]

Probab=99.88  E-value=4.5e-23  Score=205.70  Aligned_cols=100  Identities=44%  Similarity=0.848  Sum_probs=96.5

Q ss_pred             cccccCCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHhcCCCChHHH-HHHHHHHHHHHHHHHHHHHHhCCccceeeecc
Q 021398          211 LRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDT-ATVISTMLLVTGVTTTLQSYFGTRLPLVQGSS  289 (313)
Q Consensus       211 l~YgVDDkPP~~~tllLGLQHvLaM~a~lI~VPLIIa~alGLd~e~t-a~LISaaLfvSGIaTLLQs~~GsRLPIVqGpS  289 (313)
                      +.|+++|.|||...+++||||++.|+++++++|++++.++|.++++. +.+||+.||++||+||+|++||+|||++||+|
T Consensus         1 l~y~i~d~P~w~~~i~lgfQhyl~~lg~~v~iP~~lv~~m~~g~~~~~~~lIsT~~f~sGI~TllQt~fG~RLp~v~G~S   80 (510)
T KOG1292|consen    1 LHYCINDNPPWPEIILLGFQHYLVCLGTTVLIPFLLVPLMCGGDEEKAVQLISTIFFVSGITTLLQTTFGTRLPLVQGPS   80 (510)
T ss_pred             CccCCCCCCCchHHHHhccchHHHHhhhhhhhhhhhcccccCChHHHHHHHHHHHhhhccHHHHHHHHhhcccccccccc
Confidence            46999999999999999999999999999999999999999999888 99999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHhhccCCCccC
Q 021398          290 FVYLAPALVIINAREYRNLSE  310 (313)
Q Consensus       290 FAfL~paiaIa~~~g~~~lt~  310 (313)
                      |+|++|++++.+++.|.+.++
T Consensus        81 fafl~p~~~i~~~~~~~~~~~  101 (510)
T KOG1292|consen   81 FAFLPPALAIISLPRFTCITT  101 (510)
T ss_pred             eehhhHHHHHHhccccCCCCC
Confidence            999999999999999998663

>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]

Probab=99.82  E-value=4.3e-20  Score=183.49  Aligned_cols=95  Identities=33%  Similarity=0.494  Sum_probs=89.3

Q ss_pred             ccccccCCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHH----hCCcccee
Q 021398          210 ELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSY----FGTRLPLV  285 (313)
Q Consensus       210 ~l~YgVDDkPP~~~tllLGLQHvLaM~a~lI~VPLIIa~alGLd~e~ta~LISaaLfvSGIaTLLQs~----~GsRLPIV  285 (313)
                      ...+.+|+++|+.+++++||||+|+||+++|++|++++.+++++++|+++|||++||+|||+|++|++    +|+|+|++
T Consensus         4 ~~~~~~~~~~~~~~~~~lglQH~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~   83 (451)
T COG2233           4 LIYVLVDERLPLGKLLLLGLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSY   83 (451)
T ss_pred             cccCcccccCChHHHHHHHHHHHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCee
Confidence            34456888999999999999999999999999999999999999999999999999999999999997    67799999


Q ss_pred             eecchhhHHHHHHHHhhcc
Q 021398          286 QGSSFVYLAPALVIINARE  304 (313)
Q Consensus       286 qGpSFAfL~paiaIa~~~g  304 (313)
                      ||+||+|++|++++..+.+
T Consensus        84 lG~sFafi~p~i~~~~~~g  102 (451)
T COG2233          84 LGSSFAFVAPMIAIGGTTG  102 (451)
T ss_pred             EechHHHHHHHHHHHhccC
Confidence            9999999999999998755

>PRK11412 putative uracil/xanthine transporter; Provisional

Probab=99.81  E-value=4.5e-20  Score=181.88  Aligned_cols=80  Identities=18%  Similarity=0.292  Sum_probs=77.9

Q ss_pred             hHHHHHHHHHHHHHhhhhhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCccceeeecchhhHHHHHHHHh
Q 021398          222 VPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVIIN  301 (313)
Q Consensus       222 ~~tllLGLQHvLaM~a~lI~VPLIIa~alGLd~e~ta~LISaaLfvSGIaTLLQs~~GsRLPIVqGpSFAfL~paiaIa~  301 (313)
                      ++++++||||+++|++++|++|+++++++|+++++++++||++||+|||+|+||+++|+|||++||+||+||+|+++++.
T Consensus         8 ~~~~~lglQhvl~m~~~~i~vPliva~a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf~~~~~~~~i~~   87 (433)
T PRK11412          8 RESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITL   87 (433)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCchHHHHHHHHHHh
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999973

>PRK10720 uracil transporter; Provisional

Probab=99.75  E-value=2.3e-18  Score=168.51  Aligned_cols=81  Identities=23%  Similarity=0.530  Sum_probs=74.4

Q ss_pred             ccccccCCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHh-CCccceeeec
Q 021398          210 ELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYF-GTRLPLVQGS  288 (313)
Q Consensus       210 ~l~YgVDDkPP~~~tllLGLQHvLaM~a~lI~VPLIIa~alGLd~e~ta~LISaaLfvSGIaTLLQs~~-GsRLPIVqGp  288 (313)
                      +++|++||+||+.+++++||||+++|++++|++|+++    |+++++       +||+|||+|++|+++ |.|||++||+
T Consensus         2 ~~~~~~~~~~p~~~~~~lglQhvl~m~~~~i~~Pli~----gl~~~~-------~l~~sGi~TliQ~~~~g~rlP~~~G~   70 (428)
T PRK10720          2 RRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPILF----HINPAT-------VLLFNGIGTLLYLFICKGKIPAYLGS   70 (428)
T ss_pred             CcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCHHH-------HHHHHHHHHHHHHHhccCccceEEeC
Confidence            4679999999999999999999999999999999987    788753       789999999999985 5699999999


Q ss_pred             chhhHHHHHHHHh
Q 021398          289 SFVYLAPALVIIN  301 (313)
Q Consensus       289 SFAfL~paiaIa~  301 (313)
                      ||+|++|+++++.
T Consensus        71 sfa~i~~~~~~~~   83 (428)
T PRK10720         71 SFAFISPVLLLLP   83 (428)
T ss_pred             cHHHHHHHHHHHH
Confidence            9999999999875

>TIGR00801 ncs2 uracil-xanthine permease

Probab=99.71  E-value=2.1e-17  Score=160.37  Aligned_cols=88  Identities=28%  Similarity=0.470  Sum_probs=81.4

Q ss_pred             CCChhHHHHHHHHHHHHHhhhhhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHhC---CccceeeecchhhHH
Q 021398          218 NRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFG---TRLPLVQGSSFVYLA  294 (313)
Q Consensus       218 kPP~~~tllLGLQHvLaM~a~lI~VPLIIa~alGLd~e~ta~LISaaLfvSGIaTLLQs~~G---sRLPIVqGpSFAfL~  294 (313)
                      +||+++++++||||+++|+++++++|++++.++ ++++|+++++|+++|+|||+|++|+++.   .|||++||+||+|++
T Consensus         1 ~~~~~~~~~lglQh~l~~~~~~i~~p~iv~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~   79 (415)
T TIGR00801         1 RPPFLQTLVLGLQHLLAMFGGTVLVPLLVGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVS   79 (415)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHH
Confidence            689999999999999999999999999999999 9999999999999999999999999754   347999999999999


Q ss_pred             HHHHHHhhccCC
Q 021398          295 PALVIINAREYR  306 (313)
Q Consensus       295 paiaIa~~~g~~  306 (313)
                      +++++....+++
T Consensus        80 ~~~~~~~~~~~~   91 (415)
T TIGR00801        80 PMIAIGSGLGIP   91 (415)
T ss_pred             HHHHHHhccCHH
Confidence            999988765554

NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).

>TIGR03616 RutG pyrimidine utilization transport protein G

Probab=99.71  E-value=2.9e-17  Score=160.99  Aligned_cols=80  Identities=24%  Similarity=0.389  Sum_probs=74.3

Q ss_pred             cccccCCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHH-HhCCccceeeecc
Q 021398          211 LRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQS-YFGTRLPLVQGSS  289 (313)
Q Consensus       211 l~YgVDDkPP~~~tllLGLQHvLaM~a~lI~VPLIIa~alGLd~e~ta~LISaaLfvSGIaTLLQs-~~GsRLPIVqGpS  289 (313)
                      ..|++||+||+.+++++|+||+++|+++++++|+++    |++++       ++||+|||+|+||+ ++|+|||++||+|
T Consensus        19 ~~~~~d~~~p~~~~~~~GlQh~lam~~~~v~~Plil----gl~~~-------~tl~~sGi~TllQ~~~~G~rlP~v~G~s   87 (429)
T TIGR03616        19 HPVAPDERLPAAQTIVMGLQHAVAMFGATVLMPLLM----GFDPN-------LTILMSGIGTLLFFLITGGRVPSYLGSS   87 (429)
T ss_pred             cccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCHh-------HHHHHHHHHHHHHHHHhCCCceeEEcCc
Confidence            779999999999999999999999999999999997    58866       57999999999997 5899999999999


Q ss_pred             hhhHHHHHHHHh
Q 021398          290 FVYLAPALVIIN  301 (313)
Q Consensus       290 FAfL~paiaIa~  301 (313)
                      |+|+++++++..
T Consensus        88 f~f~~~~~~~~~   99 (429)
T TIGR03616        88 AAFVGAVIAATG   99 (429)
T ss_pred             HHHHHHHHHHHh
Confidence            999999998753

This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).

>TIGR03173 pbuX xanthine permease

Probab=99.57  E-value=2.2e-15  Score=145.08  Aligned_cols=78  Identities=38%  Similarity=0.610  Sum_probs=73.1

Q ss_pred             HHHHHHHHhhhhhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHH----HhCCccceeeecchhhHHHHHHHHhhc
Q 021398          228 GLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQS----YFGTRLPLVQGSSFVYLAPALVIINAR  303 (313)
Q Consensus       228 GLQHvLaM~a~lI~VPLIIa~alGLd~e~ta~LISaaLfvSGIaTLLQs----~~GsRLPIVqGpSFAfL~paiaIa~~~  303 (313)
                      |+||+++|+++++++|++++.++|+|++++..++++++|++||+|++|+    .+|+|||+++|+||+|+++++++....
T Consensus         1 ~~Qh~l~~~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~   80 (406)
T TIGR03173         1 GLQHVLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGG   80 (406)
T ss_pred             CccchHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhh
Confidence            6899999999999999999999999999999999999999999999998    479999999999999999999887654


Q ss_pred             cC
Q 021398          304 EY  305 (313)
Q Consensus       304 g~  305 (313)
                      +|
T Consensus        81 ~~   82 (406)
T TIGR03173        81 GL   82 (406)
T ss_pred             hH
Confidence            44

All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.

>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []

Probab=99.49  E-value=3.2e-14  Score=136.51  Aligned_cols=76  Identities=45%  Similarity=0.722  Sum_probs=54.6

Q ss_pred             hHHHHHHHHHHHHHhhhhhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHH-hCCccceeeecchhhHHHHHH
Q 021398          222 VPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSY-FGTRLPLVQGSSFVYLAPALV  298 (313)
Q Consensus       222 ~~tllLGLQHvLaM~a~lI~VPLIIa~alGLd~e~ta~LISaaLfvSGIaTLLQs~-~GsRLPIVqGpSFAfL~paia  298 (313)
                      ++.+++||||+++|+..++++|++++.++|+ ++++++++++++|+|||+|++|++ +|+|||+++|+||+|+.....
T Consensus         1 ~~~i~~glQ~~l~m~~~~iv~P~il~~~~g~-~~~~~~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~~~~~   77 (389)
T PF00860_consen    1 GKEILLGLQHFLAMFYIIIVVPLILAAAFGL-DADTAALISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIFAFMI   77 (389)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHTTTS------------HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHHHHHG
T ss_pred             CccHHHHHHHHHHHHHHHHHhHHHHhhcccc-cchhhHHHHHHHHHHHHHHHHHHhcCCCceecccccchhhhhhhhc
Confidence            4789999999999999999999999999999 888889999999999999999999 999999999999999994433

Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.

>TIGR00843 benE benzoate transporter

Probab=96.97  E-value=0.0035  Score=62.64  Aligned_cols=75  Identities=16%  Similarity=0.032  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHHhhhhhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCccceeeecchhhHHHHHHHH
Q 021398          224 VIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYFGTRLPLVQGSSFVYLAPALVII  300 (313)
Q Consensus       224 tllLGLQHvLaM~a~lI~VPLIIa~alGLd~e~ta~LISaaLfvSGIaTLLQs~~GsRLPIVqGpSFAfL~paiaIa  300 (313)
                      .+..|+=-+++-|++.+++-+=.+.++|++++|++..+++.++++||+|++|+++= |+|++++.| ..-+.++.+.
T Consensus        23 ~~~aG~va~lvg~~~~~~iv~~a~~~~g~s~aq~~swl~a~~~~~Gl~ti~lS~~~-r~Pi~~awS-tPGaAll~~~   97 (395)
T TIGR00843        23 TLIAGFLAVLIGYAGPAAIFFQAAIKAGASTAMIIGWITAIGIAAAVSGIFLSIRF-KTPVLTAWS-APGAALLVTG   97 (395)
T ss_pred             HHHHHHHHHHHhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCeeeecC-chHHHHHHHh
Confidence            45667767777777776666666777999999999999999999999999999743 999999999 5566665443

The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	313
3qe7_A	429	Uracil permease; uracil transporter, URAA, transpo	4e-09

>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Length = 429

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 12/80 (15%)

Query: 221 WVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSY-FG 279
            +  I   LQH  ++ G+ + +P++        +       +T+LL  G+ T L  +   
Sbjct: 14  LLQTIPLSLQHLFAMFGATVLVPVLF-----HIN------PATVLLFNGIGTLLYLFICK 62

Query: 280 TRLPLVQGSSFVYLAPALVI 299
            ++P   GSSF +++P L++
Sbjct: 63  GKIPAYLGSSFAFISPVLLL 82

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	313
3qe7_A	429	Uracil permease; uracil transporter, URAA, transpo	99.67

>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli}

Probab=99.67  E-value=5.4e-17  Score=157.53  Aligned_cols=85  Identities=25%  Similarity=0.537  Sum_probs=77.5

Q ss_pred             ccccccCCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHh-CCccceeeec
Q 021398          210 ELRFGLRDNRGWVPVIYYGLQHFLSLAGSLIFIPLIIVPAMGGTDKDTATVISTMLLVTGVTTTLQSYF-GTRLPLVQGS  288 (313)
Q Consensus       210 ~l~YgVDDkPP~~~tllLGLQHvLaM~a~lI~VPLIIa~alGLd~e~ta~LISaaLfvSGIaTLLQs~~-GsRLPIVqGp  288 (313)
                      +..|++||+||+.+.+++||||+++|+++++++|+++    |+|+       +++||+|||+|++|+++ |+|+|++||+
T Consensus         3 ~~~~~~~~~~~~~~~i~~GlQh~lam~~~~v~~Plil----Gl~~-------~~~l~~agi~Tllq~~~~~~~lP~~~G~   71 (429)
T 3qe7_A            3 RRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLF----HINP-------ATVLLFNGIGTLLYLFICKGKIPAYLGS   71 (429)
T ss_dssp             -CCBCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT----TSCH-------HHHHHHHHHHHHHHHHHTTTCCCCCEEE
T ss_pred             CcccCcccCCCHHHHHHHHHHHHHHHHHHHHHhHHHh----CCCH-------HHHHHHHHHHHHHHHHHcCCCCCeEecC
Confidence            5679999999999999999999999999999999998    7886       48999999999999985 8999999999


Q ss_pred             chhhHHHHHHHHhhccCC
Q 021398          289 SFVYLAPALVIINAREYR  306 (313)
Q Consensus       289 SFAfL~paiaIa~~~g~~  306 (313)
                      ||+|++|++++.. .+|+
T Consensus        72 sfafi~~~~~i~~-~g~~   88 (429)
T 3qe7_A           72 SFAFISPVLLLLP-LGYE   88 (429)
T ss_dssp             CGGGHHHHHHHGG-GCHH
T ss_pred             hHHHHHHHHHHHh-cCHH
Confidence            9999999999886 5543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00