Citrus Sinensis ID: 021439

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310--
Protein Sequence
MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLYTPLSPKVSWYIQGNGELWKKDEDGSHPNMITIRPDYFK
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccHHHHHHHHHHHHHHcccccccccccEEEEEccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccEEccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHEEEHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEEccEEEEEEcccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHcccccccccccEEEcccccccccccccccccccHHHHHHccc
Coil and Loop (DISEMBL)
MFSSNLIGFILAVVSSAFIGSSFIIKKKglrkagangaragsggygylleplwWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMivlhapleesLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCaprygqtnILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLnylnmdysgqsASSIASELCGFITVLSGtsvlhstrepdtplitdlytplspkvswYIQGNgelwkkdedgshpnmitirpdyfk
Flexible Loop (DISEMBL)
MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGangaragsggyGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLYTPLSPKVSWYIQGNGElwkkdedgshpnmitirpdyfk
Low Complexity Region (SEG)
MFSSNLIGFILAVVSSAFIGSSFIIkkkglrkagangaragsggygylLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLYTPLSPKVSWYIQGNGELWKKDEDGSHPNMITIRPDYFK
Disordered region (IsUnstruct)
****NLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLYTPLSPKVSWYIQGNGELWK*******************
Disordered Region (DISOPRED)
*FSSNLIGFILAVVSSAFIGSSFIIKKKGL****************YLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVL************EIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLY**************************************
Disordered Region (DISEMBL)
MFSSNLIGFILAVVSSAFIGSSFIIKKK**********RAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLYTPLSPKVSWYIQGNGELWKKDEDGSHPNMITIRPDYFK
Disordered Region (DISPRO)
**SSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGAR*GSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLYTPLSPKVSWYIQGN**********SHPNMITIRPDYFK
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLYTPLSPKVSWYIQGNGELWKKDEDGSHPNMITIRPDYFK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	312	2.2.26 [Sep-21-2011]
Q5R7Q3	360	Magnesium transporter NIP	yes	no	0.721	0.625	0.517	3e-58
Q8N8Q9	360	Magnesium transporter NIP	yes	no	0.721	0.625	0.517	3e-58
Q9JJC8	359	Magnesium transporter NIP	yes	no	0.721	0.626	0.517	3e-58
Q3SWX0	360	Magnesium transporter NIP	yes	no	0.721	0.625	0.513	5e-58
Q8BZF2	406	Magnesium transporter NIP	no	no	0.833	0.640	0.407	5e-54
Q0D2K0	466	Magnesium transporter NIP	no	no	0.833	0.557	0.410	1e-53
Q8BMW7	416	Magnesium transporter NIP	no	no	0.833	0.625	0.424	3e-50
Q5RDB8	410	Magnesium transporter NIP	no	no	0.833	0.634	0.438	2e-45
Q6NVV3	410	Magnesium transporter NIP	no	no	0.833	0.634	0.431	9e-45
Q7RTP0	329	Magnesium transporter NIP	no	no	0.605	0.574	0.438	3e-37

>sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1

 Score =  225 bits (574), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 117/226 (51%), Positives = 155/226 (68%), Gaps = 1/226 (0%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANGA-RAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           IG  LA+ SS FIG SFI+KKKGL +    G+ RAG GG+ YL E LWW G+ +M  GE+
Sbjct: 12  IGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEV 71

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA LVTPLGALS++VSA+L+ + LNE+L   G +GCLL ++GST++V+HAP
Sbjct: 72  ANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAP 131

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + ++ E+      P F+++   VV VAL+LI    PR+GQTNIL+YI ICSVIG+ 
Sbjct: 132 KEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAF 191

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN 231
           +V  VK +GIAIK    G    +    WI  +  + CV TQ+NYLN
Sbjct: 192 SVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLN 237

Acts as a selective Mg(2+) transporter.
Pongo abelii (taxid: 9601)

>sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1

 Score =  225 bits (574), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 117/226 (51%), Positives = 155/226 (68%), Gaps = 1/226 (0%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANGA-RAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           IG  LA+ SS FIG SFI+KKKGL +    G+ RAG GG+ YL E LWW G+ +M  GE+
Sbjct: 12  IGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEV 71

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA LVTPLGALS++VSA+L+ + LNE+L   G +GCLL ++GST++V+HAP
Sbjct: 72  ANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAP 131

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + ++ E+      P F+++   VV VAL+LI    PR+GQTNIL+YI ICSVIG+ 
Sbjct: 132 KEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAF 191

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN 231
           +V  VK +GIAIK    G    +    WI  +  + CV TQ+NYLN
Sbjct: 192 SVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLN 237

Acts as a selective Mg(2+) transporter.

Homo sapiens (taxid: 9606)

>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1

 Score =  225 bits (574), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 117/226 (51%), Positives = 154/226 (68%), Gaps = 1/226 (0%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANGA-RAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           IG  LA+ SS FIG SFI+KKKGL +    G+ RAG GG+ YL E LWW G+ +M  GE+
Sbjct: 12  IGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEV 71

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA LVTPLGALS++VSA+L+ + LNE+L   G +GCLL ++GST++V+HAP
Sbjct: 72  ANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAP 131

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + ++ E+      P F+++   VV VAL+ I    PR+GQTNIL+YI ICSVIG+ 
Sbjct: 132 KEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAF 191

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN 231
           +V  VK +GIAIK  L G    +    WI     + CV TQ+NYLN
Sbjct: 192 SVSCVKGLGIAIKELLAGKPVLQHPLAWILLFSLVVCVSTQINYLN 237

Acts as a selective Mg(2+) transporter.

Mus musculus (taxid: 10090)

>sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1

 Score =  224 bits (572), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 116/226 (51%), Positives = 156/226 (69%), Gaps = 1/226 (0%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANGA-RAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           IG  LA+ SS FIG SFI+KKKGL +    G+ RAG GG+ YL E LWW G+ +M  GE+
Sbjct: 12  IGLGLAMSSSIFIGGSFILKKKGLLRLARKGSTRAGQGGHAYLKEWLWWAGLLSMGAGEV 71

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA LVTPLGALS++VSA+L+ + LNE+L   G +GCLL ++GST++V+HAP
Sbjct: 72  ANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAP 131

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + ++ E+      P F+++   VV V+L+LI    PR+GQTNIL+YI ICSVIG++
Sbjct: 132 KEEEIETLNEMSHKLGDPGFVVFATLVVIVSLILIFVVGPRHGQTNILVYITICSVIGAV 191

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN 231
           +V   K +GIAIK    G    +   TWI  +  + CV TQ+NYLN
Sbjct: 192 SVSCAKGLGIAIKELFAGKPVLQHPLTWILLLSLIVCVSTQINYLN 237

Acts as a selective Mg(2+) transporter.

Bos taurus (taxid: 9913)

>sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1

 Score =  211 bits (537), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 119/292 (40%), Positives = 173/292 (59%), Gaps = 32/292 (10%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANGA-RAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           IG  LA +S   IG+S I+KKKGL +  A GA RA +GGYGYL +P+WW GM TM  GE+
Sbjct: 60  IGVGLAFLSCFLIGTSVILKKKGLIRLVATGATRAVNGGYGYLKDPMWWAGMATMSAGEV 119

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA +VTPLGALS+++SA+ + + L E L  +G LGC++C+ GST++V+HAP
Sbjct: 120 ANFGAYAFAPATVVTPLGALSVLISAIFSSYCLGESLNLLGKLGCVICMAGSTVMVIHAP 179

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + +V E+        F+++   +V   L+LI   APRYGQ NILIYI ICSVIGS 
Sbjct: 180 KEEKVTTVAEMASKMKDTGFIVFAVLLVVSCLILIFIVAPRYGQRNILIYIIICSVIGSF 239

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNM------------- 232
           +V +VK +G+ I+   +GL   +    +I +++    +I Q+N+LN              
Sbjct: 240 SVTAVKGLGVTIRNFFQGLPVVRHPLPYILSLILGLSIIIQVNFLNRALDIFNTSLVFPI 299

Query: 233 ------------------DYSGQSASSIASELCGFITVLSGTSVLHSTREPD 266
                             ++   SA  I   L GF+T++ G  +LH+ ++ D
Sbjct: 300 YYVFFTTVVVASSIVLFKEWYTMSAVDIVGTLSGFVTIILGVFMLHAFKDLD 351

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Mus musculus (taxid: 10090)

>sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3

 Score =  210 bits (534), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/292 (41%), Positives = 173/292 (59%), Gaps = 32/292 (10%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANGA-RAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           IG  LA +SS  IGSS I+KKKGL +  A GA RA  GG+GYL + +WW G  TM  GE+
Sbjct: 120 IGLGLAFLSSFLIGSSVILKKKGLLRLVATGATRAVDGGFGYLKDAMWWAGFLTMAAGEV 179

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA +VTPLGALS+++SA+L+ + L E L  +G LGC++CV GST++V+HAP
Sbjct: 180 ANFGAYAFAPATVVTPLGALSVLISAILSSYFLRESLNLLGKLGCVICVAGSTVMVIHAP 239

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + ++ E+        F+++   ++   L+LI   APRYGQ NILIYI ICSVIG+ 
Sbjct: 240 EEEKVTTIMEMASKMKDTGFIVFAVLLLVSCLILIFVIAPRYGQRNILIYIIICSVIGAF 299

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNM------------- 232
           +V +VK +GI IK   +GL   +    +I +++    + TQ+N+LN              
Sbjct: 300 SVAAVKGLGITIKNFFQGLPVVRHPLPYILSLILALSLSTQVNFLNRALDIFNTSLVFPI 359

Query: 233 ------------------DYSGQSASSIASELCGFITVLSGTSVLHSTREPD 266
                             ++   SA  IA  L GF+T++ G  +LH+ ++ D
Sbjct: 360 YYVFFTTVVVTSSIILFKEWYSMSAVDIAGTLSGFVTIILGVFMLHAFKDLD 411

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Homo sapiens (taxid: 9606)

>sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2

 Score =  199 bits (505), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/292 (42%), Positives = 173/292 (59%), Gaps = 32/292 (10%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANG-ARAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           +G +LA+ SS FIGSSFI+KKKGL +    G  RAG GG+ YL E LWW G+ +M  GE 
Sbjct: 70  VGLVLAISSSVFIGSSFILKKKGLLQLADKGITRAGQGGHSYLKEWLWWAGLLSMGAGEA 129

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA LVTPLGALS+++SA+L+ + LNE+L   G +GC+L V+GST++V+HAP
Sbjct: 130 ANFAAYAFAPATLVTPLGALSVLISAILSSYFLNERLNIHGKIGCILSVLGSTVMVIHAP 189

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            E  + S+ E+ +    P F+ +   +  ++LVLIL  AP+ GQTNIL+YI ICS+IG+ 
Sbjct: 190 QEGEVTSLHEMEMKLRDPGFVSFAVIISVISLVLILIVAPKKGQTNILVYIAICSLIGAF 249

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN-------------- 231
           +V SVK +GIAIK  LE     K    +I   +    V TQ+NYLN              
Sbjct: 250 SVSSVKGLGIAIKELLERKPVYKDPLFFILLTMLALSVTTQINYLNKALDTFNTSLVTPI 309

Query: 232 -----------------MDYSGQSASSIASELCGFITVLSGTSVLHSTREPD 266
                             ++ G  A  I   L GF T+++G  +LH+ +  +
Sbjct: 310 YYVFFTSMVVTCSAILFQEWYGMKAGDIIGTLSGFFTIINGIFLLHAFKNTN 361

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Mus musculus (taxid: 10090)

>sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1

 Score =  182 bits (463), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/292 (43%), Positives = 177/292 (60%), Gaps = 32/292 (10%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANG-ARAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           +G +LAV SS FIGSSFI+KKKGL +  + G  RAG GG+ YL E LWWVG+ +M VGE 
Sbjct: 70  VGLVLAVSSSIFIGSSFILKKKGLLQLASKGITRAGQGGHSYLKEWLWWVGLLSMGVGEA 129

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA LVTPLGALS+++SA+L+ + LNE L   G +GC+L ++GST++V+HAP
Sbjct: 130 ANFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAP 189

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + S+ E+ +    P F+ +   V  ++LVLIL  AP+ GQTNIL+YI ICS+IG+ 
Sbjct: 190 QEEEVTSLHEMEMKLRDPGFISFAVIVTVISLVLILIVAPKKGQTNILVYISICSLIGAF 249

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN-------------- 231
           +V SVK +GIAIK  +E     K    ++   V +  V TQ+NYLN              
Sbjct: 250 SVSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSIVTPI 309

Query: 232 -----------------MDYSGQSASSIASELCGFITVLSGTSVLHSTREPD 266
                             ++ G +A  I   L GF T++ G  +LH+ +  D
Sbjct: 310 YYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTD 361

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Pongo abelii (taxid: 9601)

>sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1

 Score =  181 bits (458), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 126/292 (43%), Positives = 176/292 (60%), Gaps = 32/292 (10%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANG-ARAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           +G +LAV SS FIGSSFI+KKKGL +  + G  RAG GG+ YL E LWWVG+ +M  GE 
Sbjct: 70  VGLVLAVSSSIFIGSSFILKKKGLLQLASKGFTRAGQGGHSYLKEWLWWVGLLSMGAGEA 129

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA LVTPLGALS+++SA+L+ + LNE L   G +GC+L ++GST++V+HAP
Sbjct: 130 ANFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAP 189

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + S+ E+ +    P F+ +   +  ++LVLIL  AP+ GQTNIL+YI ICS+IG+ 
Sbjct: 190 QEEEVTSLHEMEMKLRDPGFISFAVIITVISLVLILIVAPKKGQTNILVYISICSLIGAF 249

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN-------------- 231
           +V SVK +GIAIK  +E     K    ++   V +  V TQ+NYLN              
Sbjct: 250 SVSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSLVTPI 309

Query: 232 -----------------MDYSGQSASSIASELCGFITVLSGTSVLHSTREPD 266
                             ++ G +A  I   L GF T++ G  +LH+ +  D
Sbjct: 310 YYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTD 361

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

>sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1

 Score =  155 bits (393), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 124/196 (63%), Gaps = 7/196 (3%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIA 66
           +G  +AVVSS   GS+F+++KKG+        RA   G  YL + +WW G   M VG+I 
Sbjct: 30  LGLGVAVVSSLVNGSTFVLQKKGI-------VRAKRRGTSYLTDIVWWAGTIAMAVGQIG 82

Query: 67  NFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPL 126
           NF+AY   P VLVTPLGAL +   ++LA ++L EKL  +G LGCLL   GS ++++H+P 
Sbjct: 83  NFLAYTAVPTVLVTPLGALGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSPK 142

Query: 127 EESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLT 186
            ES+ +  E+    T P F+ Y+  V+ + L+LI + AP +G TNI++YI ICS++GS T
Sbjct: 143 SESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISICSLLGSFT 202

Query: 187 VMSVKAIGIAIKLTLE 202
           V S K IG+A +  L 
Sbjct: 203 VPSTKGIGLAAQDILH 218

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
356516417	345	PREDICTED: magnesium transporter NIPA2-l	1.0	0.904	0.733	1e-140
356508914	344	PREDICTED: magnesium transporter NIPA2-l	1.0	0.906	0.718	1e-138
356512886	344	PREDICTED: magnesium transporter NIPA2-l	1.0	0.906	0.718	1e-137
225460464	347	PREDICTED: magnesium transporter NIPA2 [	0.993	0.893	0.697	1e-131
357520199	345	Magnesium transporter NIPA2 [Medicago tr	1.0	0.904	0.675	1e-128
225438307	360	PREDICTED: magnesium transporter NIPA2 [	0.987	0.855	0.720	1e-127
224056096	311	predicted protein [Populus trichocarpa]	0.858	0.861	0.765	1e-124
115441347	363	Os01g0873700 [Oryza sativa Japonica Grou	0.996	0.856	0.633	1e-121
125528553	363	hypothetical protein OsI_04623 [Oryza sa	0.996	0.856	0.633	1e-121
357126127	359	PREDICTED: magnesium transporter NIPA2-l	0.996	0.866	0.627	1e-121

>gi|356516417|ref|XP_003526891.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 253/345 (73%), Positives = 284/345 (82%), Gaps = 33/345 (9%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           M+S+NLIGFILAVVSSAFIGSSFIIKKKGL++A  NG+RA  GGYGYLL+PLWW+GM TM
Sbjct: 1   MYSTNLIGFILAVVSSAFIGSSFIIKKKGLQRASLNGSRASGGGYGYLLQPLWWLGMVTM 60

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           IVGEIANFVAY+YAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLC+VGST+I
Sbjct: 61  IVGEIANFVAYVYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCIVGSTVI 120

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           VLHAP E+ L+SV+EIW LA QPAFLLY  S +AVA  LILYCAPR+GQTNIL+YIGICS
Sbjct: 121 VLHAPQEKPLSSVEEIWQLALQPAFLLYTASTIAVAFFLILYCAPRFGQTNILVYIGICS 180

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNM-------- 232
           +IGSLTVMS+KAIGIAI+LT+EG +Q    +TWIF MVA++C+ITQLNYLNM        
Sbjct: 181 IIGSLTVMSIKAIGIAIRLTIEGADQFVQFQTWIFTMVAISCIITQLNYLNMALDTFNTA 240

Query: 233 -----------------------DYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL 269
                                  DYSGQS SSIASELCGFITVLSGT+VLHSTREPD P+
Sbjct: 241 VVSPIYYALFTSFTILASAIMFKDYSGQSISSIASELCGFITVLSGTTVLHSTREPDPPV 300

Query: 270 ITDLYTPLSPKVSWYIQGNGELWK-KDEDGSHPNMIT-IRPDYFK 312
            TDLY+PLSPKVSWYIQGNGE WK K+EDG   N+IT IR D+FK
Sbjct: 301 NTDLYSPLSPKVSWYIQGNGEPWKQKEEDGPPFNLITVIRQDHFK 345

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508914|ref|XP_003523198.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 247/344 (71%), Positives = 279/344 (81%), Gaps = 32/344 (9%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           M+SSN IGFILAVVSSAFIGSSFIIKKKGL++A  NG+RA  GGYGYLL+PLWW+GM TM
Sbjct: 1   MYSSNFIGFILAVVSSAFIGSSFIIKKKGLQRASLNGSRASGGGYGYLLQPLWWLGMVTM 60

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           IVGEIANFVAY+YAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLC+VGST+I
Sbjct: 61  IVGEIANFVAYVYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCIVGSTVI 120

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           VLHAP E+SL+SV+EIW LA QPAFL Y  S +AV   LILYCAPR+GQTNIL+YIGICS
Sbjct: 121 VLHAPQEKSLSSVEEIWQLALQPAFLSYTASAIAVVFFLILYCAPRHGQTNILVYIGICS 180

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNM-------- 232
           +IGSLTVMS+KAIGIAI+LT+EG +Q    +TWIF MVA++C++TQLNYLNM        
Sbjct: 181 IIGSLTVMSIKAIGIAIRLTIEGADQFVQFQTWIFTMVAISCIVTQLNYLNMALDTFNTA 240

Query: 233 -----------------------DYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL 269
                                  DY GQS SSIASELCGF+TVLSGT+VLHSTREPD P+
Sbjct: 241 VVSPIYYALFTSFTILASAIMFKDYYGQSISSIASELCGFVTVLSGTTVLHSTREPDPPV 300

Query: 270 ITDLYTPLSPKVSWYIQGNGELWKKDEDGSHPNMIT-IRPDYFK 312
            TDLY+PLSPKVSWYIQGNGE WK+ ED    N+IT IR D+FK
Sbjct: 301 NTDLYSPLSPKVSWYIQGNGEPWKQKEDAPPFNLITVIRQDHFK 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512886|ref|XP_003525145.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 247/344 (71%), Positives = 277/344 (80%), Gaps = 32/344 (9%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           M SSNL GF+LAV+SSAFIGSSFIIKKKGL+ A ANG RA  GGYGYLL+PLWWVGM TM
Sbjct: 1   MSSSNLTGFVLAVLSSAFIGSSFIIKKKGLQLASANGPRASVGGYGYLLQPLWWVGMITM 60

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHF+L EKLQKMGMLGCLLC+VGST+I
Sbjct: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLKEKLQKMGMLGCLLCIVGSTVI 120

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           VLHAP E+SL+SVQEIW LA QPAFL Y  S +AV L L+LYCAPR+GQTNIL+Y GICS
Sbjct: 121 VLHAPEEKSLSSVQEIWELAIQPAFLSYTASAIAVTLFLVLYCAPRHGQTNILVYTGICS 180

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNM-------- 232
           ++GSLTVMSVKA+GIAIKLTLEG NQA   + W+FAMV++TC+I QLNYLNM        
Sbjct: 181 IVGSLTVMSVKAVGIAIKLTLEGANQAFHFQAWVFAMVSVTCIIVQLNYLNMALDNFNTA 240

Query: 233 -----------------------DYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL 269
                                  DYSGQS SSIASELCGFIT+LSGT++LHSTREPD P+
Sbjct: 241 VVSPIYYALFTSFTILASAIMFKDYSGQSISSIASELCGFITILSGTTILHSTREPDPPV 300

Query: 270 ITDLYTPLSPKVSWYIQGNGELWKKDEDGSHPNMIT-IRPDYFK 312
           + DLYTPLSPKVSWYIQGN E WK++ED S  N+I  IR D+FK
Sbjct: 301 VADLYTPLSPKVSWYIQGNSEPWKQEEDVSPLNLIAIIRQDHFK 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225460464|ref|XP_002272602.1| PREDICTED: magnesium transporter NIPA2 [Vitis vinifera] gi|296088673|emb|CBI38123.3| unnamed protein product [Vitis vinifera]

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 240/344 (69%), Positives = 274/344 (79%), Gaps = 34/344 (9%)

Query: 2   FSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMI 61
           FS NL GFILAVVSSAFIGSSFIIKKKGL++A A+G  A SGGYGYLLEPLWW+GM TMI
Sbjct: 5   FSDNLTGFILAVVSSAFIGSSFIIKKKGLQRAAASGPPASSGGYGYLLEPLWWIGMVTMI 64

Query: 62  VGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIV 121
           VGEIANFVAYI+APAVLVTPLGALSIIVSAVLAHF+L EKL+KMG+ GC+LC+VGST+IV
Sbjct: 65  VGEIANFVAYIFAPAVLVTPLGALSIIVSAVLAHFLLKEKLRKMGIYGCVLCIVGSTLIV 124

Query: 122 LHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSV 181
           LHAP E SL+SV+EIW LATQPAFLLY  S +AV LVL+LYC PRYGQTNI++YIGICS+
Sbjct: 125 LHAPSEHSLSSVEEIWELATQPAFLLYTASAIAVVLVLVLYCEPRYGQTNIMVYIGICSI 184

Query: 182 IGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNM--------- 232
           IGSLTVMS+KAIGIAIKLTLEG +Q    +TW+FAMVA+TC+ITQLNYLN          
Sbjct: 185 IGSLTVMSIKAIGIAIKLTLEGSSQVAHFQTWVFAMVAITCIITQLNYLNKALDTFNTAV 244

Query: 233 ----------------------DYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLI 270
                                 D+SGQSASSI S LCGFITVLSGT VLHSTREPD PLI
Sbjct: 245 VSPIYYALFTSFTILASAIMFKDWSGQSASSIVSVLCGFITVLSGTMVLHSTREPDPPLI 304

Query: 271 TDLYTPLSPKVSWYIQGNGELWK-KDEDGSHPNMITI-RPDYFK 312
           TD+Y+ L P++SW +Q NG +WK KD+D   P+ ITI R D+FK
Sbjct: 305 TDVYSSL-PQISWLVQVNGNIWKQKDDDEVSPDFITILRQDHFK 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520199|ref|XP_003630388.1| Magnesium transporter NIPA2 [Medicago truncatula] gi|355524410|gb|AET04864.1| Magnesium transporter NIPA2 [Medicago truncatula]

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/345 (67%), Positives = 268/345 (77%), Gaps = 33/345 (9%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           M S+NL GF+LA++SSAFIGSSFIIKKKGL+ A  NG  A  GGYGYLL+PLWWVGM TM
Sbjct: 1   MSSTNLTGFLLALISSAFIGSSFIIKKKGLQLARVNGPSASVGGYGYLLQPLWWVGMVTM 60

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           IVGEIANFVAY+YAPAVLVTPLGALSIIVSAVLAHF+L EKLQKMGMLGCL+C++GST+I
Sbjct: 61  IVGEIANFVAYMYAPAVLVTPLGALSIIVSAVLAHFLLKEKLQKMGMLGCLICILGSTII 120

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           VLHAP E SL+SVQ+IW LA QPAFL+Y  S +A+ L L+LYCAPRYGQ+NIL+YIGICS
Sbjct: 121 VLHAPQEMSLSSVQQIWKLAIQPAFLMYTTSAIAITLFLVLYCAPRYGQSNILVYIGICS 180

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNM-------- 232
           ++GSLTVMSVKAIGIAIKLTLEG NQ    +TW+F MVA+TC+I QLNYLNM        
Sbjct: 181 IVGSLTVMSVKAIGIAIKLTLEGANQIFYFQTWVFTMVAITCIIIQLNYLNMALDNFNTA 240

Query: 233 -----------------------DYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL 269
                                  DYSGQS  SI SELCGFIT+LSGT +LH TREPD P+
Sbjct: 241 VVSPIYYALFTAFTILASAIMFKDYSGQSIGSIVSELCGFITILSGTFLLHGTREPDPPV 300

Query: 270 ITDLYTPLSPKVSWYIQGNGELWKKDEDGSHP-NMIT-IRPDYFK 312
             DLY+PLSP+VSWY QGN E WK+ E+   P N+I  IR D+FK
Sbjct: 301 NPDLYSPLSPRVSWYFQGNNESWKQKEEDVPPFNLIAIIRQDHFK 345

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438307|ref|XP_002270969.1| PREDICTED: magnesium transporter NIPA2 [Vitis vinifera] gi|296082637|emb|CBI21642.3| unnamed protein product [Vitis vinifera]

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 247/343 (72%), Positives = 277/343 (80%), Gaps = 35/343 (10%)

Query: 3   SSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIV 62
           SSN  G +LAVVSSAFIGSSFIIKKKGL+KAGA+G RA  GGYGYLLEPLWW+GM TMIV
Sbjct: 20  SSNFKGVLLAVVSSAFIGSSFIIKKKGLKKAGASGPRASVGGYGYLLEPLWWMGMITMIV 79

Query: 63  GEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVL 122
           GEIANFVAY++APA LVTPLGALSIIVSAVLAHF+LNEKLQKMGMLGCLLC+VGS +IVL
Sbjct: 80  GEIANFVAYVFAPATLVTPLGALSIIVSAVLAHFLLNEKLQKMGMLGCLLCIVGSVVIVL 139

Query: 123 HAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVI 182
           HA  E SL SV+EIW LA QPAFLLY  S +AV+LVLILYCAPRYGQTNIL+YIGICS+I
Sbjct: 140 HASDESSLASVEEIWELAIQPAFLLYTASAIAVSLVLILYCAPRYGQTNILVYIGICSII 199

Query: 183 GSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNM---------- 232
           GSLTVMS+KA+GIAI+LTLEG NQ K  + W+F MV++TC++TQLNYLNM          
Sbjct: 200 GSLTVMSIKAVGIAIELTLEGTNQFKYFQAWVFLMVSVTCIMTQLNYLNMALDTFNTAVV 259

Query: 233 ---------------------DYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLIT 271
                                D+SG SASSI SELCGFITVLSGT++LHSTREPD P IT
Sbjct: 260 SPIYYALFTSFTILASVIMFKDWSGLSASSIVSELCGFITVLSGTAILHSTREPDPPFIT 319

Query: 272 DLYTPLSPKVSWYIQGNGELWK-KDEDGSHPNMITI-RPDYFK 312
           DLYTPLSPKVSW+IQGNGE+WK KDEDG  P+ + I R DYFK
Sbjct: 320 DLYTPLSPKVSWHIQGNGEIWKPKDEDG--PDFVAILRQDYFK 360

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056096|ref|XP_002298727.1| predicted protein [Populus trichocarpa] gi|222845985|gb|EEE83532.1| predicted protein [Populus trichocarpa]

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 229/299 (76%), Positives = 252/299 (84%), Gaps = 31/299 (10%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           M+SSNL+GFILA+VSSAFIGSSFIIKKKGLRKAG +G RA SGGYGYLLEPLWW+GM TM
Sbjct: 1   MYSSNLLGFILAMVSSAFIGSSFIIKKKGLRKAGVSGPRASSGGYGYLLEPLWWIGMITM 60

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           IVGEI+NFVAYIYAPAVLVTPLGALSIIVSAVLAHF+L EKLQKMG+LGCLLC+VGST+I
Sbjct: 61  IVGEISNFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLKEKLQKMGVLGCLLCIVGSTVI 120

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           VLHAP E S+NSV+EIW LA QPAFLLY  SVVA+ALVLILY +PRYGQTNIL+YIGICS
Sbjct: 121 VLHAPEERSINSVEEIWELAIQPAFLLYTASVVAIALVLILYFSPRYGQTNILVYIGICS 180

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNM-------- 232
           VIGSLTVMS+KAIGIAIKLT+EG+NQAK  +TWIFAMV +TC+ITQLNYLNM        
Sbjct: 181 VIGSLTVMSIKAIGIAIKLTIEGINQAKYFQTWIFAMVVITCIITQLNYLNMALDTFNTA 240

Query: 233 -----------------------DYSGQSASSIASELCGFITVLSGTSVLHSTREPDTP 268
                                  DYSGQSASSIASELCGF+TVLSGT+VLHSTREPD P
Sbjct: 241 VVSPIYYAGFTSFTILASAIMFKDYSGQSASSIASELCGFLTVLSGTAVLHSTREPDPP 299

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115441347|ref|NP_001044953.1| Os01g0873700 [Oryza sativa Japonica Group] gi|56785086|dbj|BAD82725.1| putative NTS2 protein [Oryza sativa Japonica Group] gi|113534484|dbj|BAF06867.1| Os01g0873700 [Oryza sativa Japonica Group] gi|215737176|dbj|BAG96105.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/344 (63%), Positives = 268/344 (77%), Gaps = 33/344 (9%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           +F++NL G +LAV SSAFIG SFI+KKKGL +AGA G+RAG GGYGYLLEPLWWVGM TM
Sbjct: 19  LFAANLKGSLLAVASSAFIGVSFIVKKKGLLRAGAAGSRAGVGGYGYLLEPLWWVGMVTM 78

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           +VGEIANF+AY++APAVLVTPLGALSIIVSAVLAHF LNEKLQ++G+LGC+LC+VGST+I
Sbjct: 79  LVGEIANFIAYMFAPAVLVTPLGALSIIVSAVLAHFTLNEKLQRVGVLGCVLCIVGSTVI 138

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           +LHAP E + +SV EIW LA QP FL Y  + VAV+L L++YCAPRYGQ NI++Y+GICS
Sbjct: 139 ILHAPQERTPSSVDEIWHLAIQPDFLCYATAAVAVSLFLMIYCAPRYGQMNIMVYVGICS 198

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNM-------- 232
           VIGSLTVMS+KA+GIAIKLT+EG+NQA   +TW+FA++++TC+  QL YLN         
Sbjct: 199 VIGSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFAVISITCIAVQLVYLNKALDTFNAA 258

Query: 233 -----------------------DYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL 269
                                  D+SGQSAS IASE+CGF+TVL+GT VLHSTREPD  L
Sbjct: 259 VVSPIYYAMFTTLTILASAIMFKDWSGQSASKIASEICGFLTVLAGTLVLHSTREPDQTL 318

Query: 270 ITDLYTPLSPKVSWYIQGNGELWKKDEDGSHP-NMITI-RPDYF 311
             DLY PL PK+ W+IQGNG++ K+ ED S P ++IT+ R DYF
Sbjct: 319 SADLYAPLPPKIYWHIQGNGDIGKQKEDDSLPCDIITVMRQDYF 362

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125528553|gb|EAY76667.1| hypothetical protein OsI_04623 [Oryza sativa Indica Group]

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/344 (63%), Positives = 268/344 (77%), Gaps = 33/344 (9%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           +F++NL G +LAV SSAFIG SFI+KKKGL +AGA G+RAG GGYGYLLEPLWWVGM TM
Sbjct: 19  LFAANLKGSLLAVASSAFIGVSFIVKKKGLLRAGAAGSRAGVGGYGYLLEPLWWVGMVTM 78

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           +VGEIANF+AY++APAVLVTPLGALSIIVSAVLAHF LNEKLQ++G+LGC+LC+VGST+I
Sbjct: 79  LVGEIANFIAYMFAPAVLVTPLGALSIIVSAVLAHFTLNEKLQRVGVLGCVLCIVGSTVI 138

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           +LHAP E + +SV EIW LA QP FL Y  + VAV+L L++YCAPRYGQ NI++Y+GICS
Sbjct: 139 ILHAPQERTPSSVDEIWHLAIQPDFLCYATAAVAVSLFLMIYCAPRYGQMNIMVYVGICS 198

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNM-------- 232
           VIGSLTVMS+KA+GIAIKLT+EG+NQA   +TW+FA++++TC+  QL YLN         
Sbjct: 199 VIGSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFAVISITCIAVQLVYLNKALDTFNTA 258

Query: 233 -----------------------DYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL 269
                                  D+SGQSAS IASE+CGF+TVL+GT VLHSTREPD  L
Sbjct: 259 VVSPIYYAMFTTLTILASAIMFKDWSGQSASKIASEICGFLTVLAGTLVLHSTREPDQTL 318

Query: 270 ITDLYTPLSPKVSWYIQGNGELWKKDEDGSHP-NMITI-RPDYF 311
             DLY PL PK+ W+IQGNG++ K+ ED S P ++IT+ R DYF
Sbjct: 319 SADLYAPLPPKIYWHIQGNGDIGKQKEDDSLPCDIITVMRQDYF 362

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357126127|ref|XP_003564740.1| PREDICTED: magnesium transporter NIPA2-like [Brachypodium distachyon]

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/344 (62%), Positives = 268/344 (77%), Gaps = 33/344 (9%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           +F++NL G +LAV SSAF+G SFI+KKKGLR+AG+ G+RAG GGYGYL+EPLWWVGM TM
Sbjct: 15  LFAANLKGALLAVASSAFVGVSFIVKKKGLRRAGSTGSRAGVGGYGYLVEPLWWVGMVTM 74

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           +VGEIANFVAY++APAVLV PLGALSIIVSAVLAHFMLNEKLQ++G+LGC+LC+VGST+I
Sbjct: 75  LVGEIANFVAYMFAPAVLVAPLGALSIIVSAVLAHFMLNEKLQRVGVLGCVLCIVGSTVI 134

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           +LHAP E + +SV++IW LATQP FL Y    VAV+L+L+LYCAPRYGQTNI++Y+GICS
Sbjct: 135 ILHAPQERTPSSVEQIWHLATQPTFLCYAALAVAVSLLLMLYCAPRYGQTNIMVYVGICS 194

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNM-------- 232
            IGSLTVMS+KA+GIA+KLT++G+NQA   +TW+F  V+ TC++ QL YLN         
Sbjct: 195 AIGSLTVMSIKAVGIAVKLTIQGINQAGYFQTWLFVTVSATCLVIQLIYLNKALDTFNTA 254

Query: 233 -----------------------DYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL 269
                                  D+SGQSAS IASE+CGF+TVL+GT VLHSTREPD  L
Sbjct: 255 LVSPIYYAMFTTLTILASAIMFKDWSGQSASIIASEICGFLTVLAGTVVLHSTREPDQTL 314

Query: 270 ITDLYTPLSPKVSWYIQGNGELWKKDEDGSHP-NMIT-IRPDYF 311
             DLYTPL P + W+IQGNG++ K+ ED S P + IT +R DYF
Sbjct: 315 SGDLYTPLPPTIYWHIQGNGDIGKQKEDDSLPCDFITVVRQDYF 358

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
TAIR|locus:2141742	326	AT4G38730 "AT4G38730" [Arabido	0.740	0.708	0.632	1.5e-74
TAIR|locus:2047112	328	AT2G21120 [Arabidopsis thalian	0.740	0.704	0.636	6.5e-74
TAIR|locus:2009343	368	AT1G34470 "AT1G34470" [Arabido	0.875	0.741	0.512	2.5e-72
TAIR|locus:2016084	343	AT1G71900 "AT1G71900" [Arabido	0.875	0.795	0.509	2.1e-70
TAIR|locus:2136912	386	AT4G09640 "AT4G09640" [Arabido	0.875	0.707	0.509	1.4e-69
TAIR|locus:2076186	335	AT3G23870 "AT3G23870" [Arabido	0.740	0.689	0.584	4.4e-68
TAIR|locus:2119540	336	AT4G13800 [Arabidopsis thalian	0.740	0.687	0.584	1.5e-67
CGD|CAL0004327	368	orf19.5352 [Candida albicans (	0.794	0.673	0.450	7.8e-58
UNIPROTKB|Q5A5P7	368	CaO19.12812 "Putative uncharac	0.794	0.673	0.450	7.8e-58
UNIPROTKB|F1NBX2	361	NIPA2 "Uncharacterized protein	0.721	0.623	0.477	1.7e-50

TAIR|locus:2141742 AT4G38730 "AT4G38730" [Arabidopsis thaliana (taxid:3702)]

 Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
 Identities = 146/231 (63%), Positives = 174/231 (75%)

Query:     1 MFSSNLIGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMFTM 60
             M S N +G +LAV SS FIGSSFI+                       LEPLWWVG+ TM
Sbjct:     1 MVSDNEMGLVLAVSSSVFIGSSFILKKKGLKRAAANGTRAGFGGYTYLLEPLWWVGLVTM 60

Query:    61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
               GEIANFVAY+YAPAVLVTPLGALSII+SAVLAHF+L+EKL+KMG+ GC+ C+VGS MI
Sbjct:    61 TFGEIANFVAYVYAPAVLVTPLGALSIIISAVLAHFLLDEKLRKMGVWGCVCCIVGSVMI 120

Query:   121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
             V+HAP E++ NSV+EIW LA QPAFL+YV   +++ L LILYC P  GQTNIL+YIGICS
Sbjct:   121 VIHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIVLALILYCEPLCGQTNILVYIGICS 180

Query:   181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN 231
             ++GSLTVMS+KA+GIAIKLT EG+NQ    ETW FAMVA  CV+ Q+ YLN
Sbjct:   181 LMGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFAMVAAICVVMQMIYLN 231

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2047112 AT2G21120 [Arabidopsis thaliana (taxid:3702)]

 Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
 Identities = 147/231 (63%), Positives = 177/231 (76%)

Query:     1 MFSSNLIGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMFTM 60
             M + N  G ILAV SS FIGSSFI+                       LEPLWW GM TM
Sbjct:     1 METDNGKGLILAVASSVFIGSSFILKKKGLKRAGAIGTRAGYGGYTYLLEPLWWAGMVTM 60

Query:    61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
             IVGE ANFVAYIYAPAVLVTPLGALSII+SAVLAHF+L EKL+KMG+LGC+ C+VGS +I
Sbjct:    61 IVGEAANFVAYIYAPAVLVTPLGALSIIISAVLAHFLLKEKLKKMGVLGCVSCIVGSVVI 120

Query:   121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
             V+HAP E++ NSV+EIW LATQPAFL+YV   +++ L LIL+  P  GQTNIL+YIGICS
Sbjct:   121 VIHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFEPLCGQTNILVYIGICS 180

Query:   181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN 231
             ++G+LTVMS+KAIGIAIKLT+EG++Q    +TW+F MVA+TCV+TQL YLN
Sbjct:   181 LMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVVTQLIYLN 231

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2009343 AT1G34470 "AT1G34470" [Arabidopsis thaliana (taxid:3702)]

 Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
 Identities = 142/277 (51%), Positives = 194/277 (70%)

Query:     1 MFSSNLIGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMFTM 60
             M S N+ G +LA+ SS FIG+SFI+                       LEPLWWVGM TM
Sbjct:    15 MSSDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYSYLLEPLWWVGMITM 74

Query:    61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
             IVGEIANF AY +APA+LVTPLGALSII+SA LAH +L+EKL   G+LGC+LCVVGS  I
Sbjct:    75 IVGEIANFAAYAFAPAILVTPLGALSIIISAALAHVILHEKLHTFGLLGCVLCVVGSITI 134

Query:   121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
             VLHAP E+ ++SV ++W LAT+PAFLLY  +VV  A++LI+   P+YGQ+++++YIG+CS
Sbjct:   135 VLHAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVPQYGQSHVMVYIGVCS 194

Query:   181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN--MD-YSGQ 237
             ++GSL+VMSVKA+GIA+KLT  G+NQ    +TW+F ++ LTCVITQ+NYLN  +D ++  
Sbjct:   195 LVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVLTCVITQMNYLNKALDTFNTA 254

Query:   238 SASSIASELCGFITVLSGTSVLHS-TREPDTPLITDL 273
               S I   +   +T+L+   +     R+  T ++T+L
Sbjct:   255 VVSPIYYVMFTSLTILASVIMFKDWDRQDGTQIVTEL 291

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2016084 AT1G71900 "AT1G71900" [Arabidopsis thaliana (taxid:3702)]

 Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
 Identities = 141/277 (50%), Positives = 188/277 (67%)

Query:     1 MFSSNLIGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMFTM 60
             M S N+ G +LA+ SS FIG+SFI+                        EPLWW+GM TM
Sbjct:    15 MSSDNIKGLVLALSSSLFIGASFIVKKKGLKKAASTGTRAGVGGYSYLYEPLWWIGMTTM 74

Query:    61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
             ++GEIANF AY +APA+LVTPLGA+SII+SAVLAH +L EKL   G+LGC LCVVGST I
Sbjct:    75 LLGEIANFAAYAFAPAILVTPLGAVSIIISAVLAHIILREKLHIFGILGCALCVVGSTTI 134

Query:   121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
             VLHAP E  ++SV E+W LAT+PAF+ Y   V+  A+ LI+   P+YGQTN+++YIGICS
Sbjct:   135 VLHAPQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVPQYGQTNVMVYIGICS 194

Query:   181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN--MD-YSGQ 237
             ++GSL+VMSVKA+GIA+KLT  G NQ    +TWIF +V LTCV+TQLNYLN  +D ++  
Sbjct:   195 LVGSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVTQLNYLNKALDTFNTA 254

Query:   238 SASSIASELCGFITVLSGTSVLHS-TREPDTPLITDL 273
               S I   +   +T+L+   +     R+  T ++T++
Sbjct:   255 IVSPIYYVMFTSLTILASVIMFKDWDRQNGTQIVTEI 291

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2136912 AT4G09640 "AT4G09640" [Arabidopsis thaliana (taxid:3702)]

 Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
 Identities = 141/277 (50%), Positives = 187/277 (67%)

Query:     1 MFSSNLIGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMFTM 60
             M S N+ G +LA+ SS FIG+SFI+                       LEPLWW+GM TM
Sbjct:    15 MSSDNVKGLVLALSSSIFIGASFIVKKKGLKKAGASGLRAGSGGYSYLLEPLWWIGMITM 74

Query:    61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
             IVGEIANF AY +APA+LVTPLGALSII+SA LAH +L EKL   G+LGC LC+VGS  I
Sbjct:    75 IVGEIANFAAYAFAPAILVTPLGALSIIISASLAHIILQEKLHTFGILGCALCIVGSVTI 134

Query:   121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
             VLHAP E+ + SV E+W LAT+PAFL Y  +VV  A+VLI+   P YGQ+++++YIG+CS
Sbjct:   135 VLHAPQEQDIVSVLEVWNLATEPAFLFYAAAVVGAAIVLIVQFIPLYGQSHVMVYIGVCS 194

Query:   181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN--MD-YSGQ 237
             +IGSL+VMSVKA+GIA+KLT  G NQ    +TW+F ++ L CVITQ+NYLN  +D ++  
Sbjct:   195 LIGSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCVITQMNYLNKALDTFNTA 254

Query:   238 SASSIASELCGFITVLSGTSVLHS-TREPDTPLITDL 273
               S I   +   +T+L+   +     R+  T ++T+L
Sbjct:   255 VVSPIYYVMFTSLTILASVIMFKDWDRQSGTQIMTEL 291

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076186 AT3G23870 "AT3G23870" [Arabidopsis thaliana (taxid:3702)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 135/231 (58%), Positives = 161/231 (69%)

Query:     1 MFSSNLIGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMFTM 60
             M   N+ G ILAV SS FIGSSFII                        EP WW GM TM
Sbjct:     4 MSPDNINGVILAVSSSIFIGSSFIIKKKGLKKAGASGVRAGEGGYGYLKEPWWWAGMITM 63

Query:    61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
             IVGE+ANF AY +APA+LVTPLGALSII SAVLAHF+L EKL   G+LGC+LCVVGST I
Sbjct:    64 IVGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKEKLHMFGILGCILCVVGSTTI 123

Query:   121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
             VLHAP E+ + SV++IW LA +P FL+Y   +V V  +LI Y  PRYG+T++++Y+GICS
Sbjct:   124 VLHAPHEQKIESVKQIWQLAIEPGFLVYSAVIVIVVAILIFYYEPRYGKTHMIVYVGICS 183

Query:   181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN 231
             ++GSLTVMSVKA+ IAIKLT  G NQ K   TWIF +V  TC I Q+NYLN
Sbjct:   184 LMGSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCILQINYLN 234

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2119540 AT4G13800 [Arabidopsis thaliana (taxid:3702)]

 Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
 Identities = 135/231 (58%), Positives = 160/231 (69%)

Query:     1 MFSSNLIGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMFTM 60
             M   N+ G ILAV SS FIGSSFII                        EP WW GM TM
Sbjct:     4 MSPDNIHGVILAVSSSIFIGSSFIIKKKGLKKAGVSGARAGEGGYGYLYEPWWWAGMITM 63

Query:    61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
             IVGEIANF AY +APA+LVTPLGALSII SAVLAHF+L EKL   G+LGC+LCVVGST I
Sbjct:    64 IVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILEEKLHMFGILGCVLCVVGSTTI 123

Query:   121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
             VLHAP E+ + SV+++W LAT+P FL Y   V+ V L LI Y  PRYG+T++++Y+GICS
Sbjct:   124 VLHAPHEQGIESVKQVWHLATEPGFLAYSAVVLVVVLALIFYYEPRYGKTHMIVYVGICS 183

Query:   181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN 231
             ++GSLTVMSVKA+ IAIKLT  G+NQ K    WIF +V   C I Q+NYLN
Sbjct:   184 LMGSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCILQINYLN 234

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

CGD|CAL0004327 orf19.5352 [Candida albicans (taxid:5476)]

 Score = 557 (201.1 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
 Identities = 113/251 (45%), Positives = 157/251 (62%)

Query:     7 IGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLE-PLWWVGMFTMIVGEI 65
             IG  LA+ SS  IG+SFII                       L+ P+WW GM TM +GEI
Sbjct:     6 IGLALAMSSSLAIGTSFIITKKGLMDASARTGGTDGVQASDYLQNPIWWGGMITMAIGEI 65

Query:    66 ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
             ANF AY +APA+LVTPLGALS+I+ AVLA   L E+L  +G +GC +C++GS +I+LHAP
Sbjct:    66 ANFAAYTFAPAILVTPLGALSVIIGAVLAAIFLKERLGTLGKMGCAICLMGSVIIILHAP 125

Query:   126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
              ++ + +V EI   ATQP F+ Y   V   +L +I    P+YG TN +IY+ ICS +GS+
Sbjct:   126 PDKEVQTVDEILGYATQPGFMFYCTVVTLYSLFMIYKIVPKYGNTNPMIYLSICSSVGSI 185

Query:   186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMDYSGQSASSIASE 245
             +VMS+KA GIA+KLTL G NQ   + T++F +V   C++TQ+NY N     Q  +SI + 
Sbjct:   186 SVMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALCIVTQMNYFNKALD-QFDTSIVNP 244

Query:   246 LCGFITVLSGT 256
             L  ++T  + T
Sbjct:   245 LY-YVTFTTFT 254

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5A5P7 CaO19.12812 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 557 (201.1 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
 Identities = 113/251 (45%), Positives = 157/251 (62%)

Query:     7 IGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLE-PLWWVGMFTMIVGEI 65
             IG  LA+ SS  IG+SFII                       L+ P+WW GM TM +GEI
Sbjct:     6 IGLALAMSSSLAIGTSFIITKKGLMDASARTGGTDGVQASDYLQNPIWWGGMITMAIGEI 65

Query:    66 ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
             ANF AY +APA+LVTPLGALS+I+ AVLA   L E+L  +G +GC +C++GS +I+LHAP
Sbjct:    66 ANFAAYTFAPAILVTPLGALSVIIGAVLAAIFLKERLGTLGKMGCAICLMGSVIIILHAP 125

Query:   126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
              ++ + +V EI   ATQP F+ Y   V   +L +I    P+YG TN +IY+ ICS +GS+
Sbjct:   126 PDKEVQTVDEILGYATQPGFMFYCTVVTLYSLFMIYKIVPKYGNTNPMIYLSICSSVGSI 185

Query:   186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMDYSGQSASSIASE 245
             +VMS+KA GIA+KLTL G NQ   + T++F +V   C++TQ+NY N     Q  +SI + 
Sbjct:   186 SVMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALCIVTQMNYFNKALD-QFDTSIVNP 244

Query:   246 LCGFITVLSGT 256
             L  ++T  + T
Sbjct:   245 LY-YVTFTTFT 254

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1NBX2 NIPA2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
 Identities = 108/226 (47%), Positives = 144/226 (63%)

Query:     7 IGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXL-EPLWWVGMFTMIVGEI 65
             IG +LA+ SS FIG SFI+                       L E LWW G+ +M  GE+
Sbjct:    12 IGLVLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEV 71

Query:    66 ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
             ANF AY +APA LVTPLGALS++VSA+L+ F LNEKL   G +GCLL ++GST++V+HAP
Sbjct:    72 ANFAAYAFAPATLVTPLGALSVLVSAILSSFFLNEKLNLHGKIGCLLSILGSTVMVIHAP 131

Query:   126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
              EE + ++ E+      P F+++   VV V+L+LI+   PR+GQTNIL+YI ICSVIG+L
Sbjct:   132 QEEEVETLDEMSNKLRDPGFVVFATLVVIVSLILIVVVGPRHGQTNILVYITICSVIGAL 191

Query:   186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN 231
             +V  VK +GIAIK    G    K   +WI  +  + CV TQ+NYLN
Sbjct:   192 SVSCVKGLGIAIKELFAGKPVLKRPLSWILLLSLIVCVSTQINYLN 237

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0005769 "early endosome" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3SWX0	NIPA2_BOVIN	No assigned EC number	0.5132	0.7211	0.625	yes	no
Q5R7Q3	NIPA2_PONAB	No assigned EC number	0.5176	0.7211	0.625	yes	no
Q8N8Q9	NIPA2_HUMAN	No assigned EC number	0.5176	0.7211	0.625	yes	no
Q9JJC8	NIPA2_MOUSE	No assigned EC number	0.5176	0.7211	0.6267	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00001732001 SubName- Full=Chromosome chr18 scaffold_121, whole genome shotgun sequence; (347 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	312
pfam05653	300	pfam05653, Mg_trans_NIPA, Magnesium transporter NI	1e-120
pfam13536	112	pfam13536, EmrE, Multidrug resistance efflux trans	0.001

>gnl|CDD|114381 pfam05653, Mg_trans_NIPA, Magnesium transporter NIPA

 Score =  347 bits (893), Expect = e-120
 Identities = 171/295 (57%), Positives = 204/295 (69%), Gaps = 31/295 (10%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           M + N IG ILAV SS FIGSSFIIKKKGL +    G RAG GGYGYL E LWW G+ TM
Sbjct: 1   MNTDNYIGLILAVSSSIFIGSSFIIKKKGLLRLARGGMRAGEGGYGYLKEWLWWAGLLTM 60

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           IVGE ANF AY +APA LVTPLGALS+I+SAVL+ F LNEKL   G LGC+LC+VGST+I
Sbjct: 61  IVGEAANFAAYAFAPATLVTPLGALSVIISAVLSSFFLNEKLNLFGKLGCVLCIVGSTVI 120

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           V+HAP E+ + SV+E+W LAT P FL+YV  VV V L+LI +  PR+GQTNIL+YI ICS
Sbjct: 121 VIHAPKEQEIESVREVWNLATDPGFLVYVILVVGVVLILIFFVEPRHGQTNILVYITICS 180

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNM-------- 232
           +IGSLTVMSVKA+GIAIKLT  G NQ    + WIF +V +TCV+TQ+NYLN         
Sbjct: 181 LIGSLTVMSVKALGIAIKLTFSGKNQLGYPQFWIFLVVVVTCVVTQINYLNKALDIFNTS 240

Query: 233 -----------------------DYSGQSASSIASELCGFITVLSGTSVLHSTRE 264
                                  ++ GQS   IA ELCGF T+L GT +LH+TR+
Sbjct: 241 IVTPVYYVFFTTSVIAASAILFKEWLGQSFDDIAGELCGFFTILLGTFLLHATRD 295

NIPA (nonimprinted in Prader-Willi/Angelman syndrome) is a family of integral membrane proteins which function as magnesium transporters. Length = 300

>gnl|CDD|222207 pfam13536, EmrE, Multidrug resistance efflux transporter

 Score = 37.2 bits (87), Expect = 0.001
 Identities = 13/80 (16%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 53  WWVGMFTMIVGEIANFVAYIYAPAVL---VTPLGALSIIVSAVLAHFMLNEKLQKMGMLG 109
           W   +   ++G    +     A       V  + AL+ + +A+L   +  ++L K  +L 
Sbjct: 34  WLWLILAGLIG-FLFYALLCLALQYGPGWVVAITALTPVFAALLGRLLFKQRLPKRELLA 92

Query: 110 CLLCVVGSTMIVLHAPLEES 129
             + + G  ++ +      S
Sbjct: 93  SAIILAGVVLMQVTEATGLS 112

This is a membrane protein family acting as a multidrug resistance efflux transporter. Length = 112

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	312
KOG2922	335	consensus Uncharacterized conserved protein [Funct	100.0
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	100.0
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.62
COG2510	140	Predicted membrane protein [Function unknown]	98.53
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.43
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.41
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	98.33
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.29
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.18
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.1
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.96
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.85
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.65
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.59
PLN00411	358	nodulin MtN21 family protein; Provisional	97.57
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.53
PLN00411	358	nodulin MtN21 family protein; Provisional	97.51
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.49
PRK11272	292	putative DMT superfamily transporter inner membran	97.49
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.48
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.42
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.34
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.32
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.3
PRK15430	296	putative chloramphenical resistance permease RarD;	97.28
PRK13499	345	rhamnose-proton symporter; Provisional	97.23
PRK11689	295	aromatic amino acid exporter; Provisional	97.2
PRK11272	292	putative DMT superfamily transporter inner membran	97.19
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.11
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.07
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.07
PRK11689	295	aromatic amino acid exporter; Provisional	97.06
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.83
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.73
KOG3912	372	consensus Predicted integral membrane protein [Gen	96.61
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	96.49
PRK10532	293	threonine and homoserine efflux system; Provisiona	96.48
PRK11431	105	multidrug efflux system protein; Provisional	96.46
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.32
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	96.02
KOG2765	416	consensus Predicted membrane protein [Function unk	95.87
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.83
COG2076	106	EmrE Membrane transporters of cations and cationic	95.72
PRK15430	296	putative chloramphenical resistance permease RarD;	95.55
KOG4510	346	consensus Permease of the drug/metabolite transpor	95.15
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	94.57
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	94.44
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	93.82
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	93.75
COG2962	293	RarD Predicted permeases [General function predict	91.76
KOG4831	125	consensus Unnamed protein [Function unknown]	90.2
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	89.94
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	89.7
COG1742	109	Uncharacterized conserved protein [Function unknow	85.2
PRK02237	109	hypothetical protein; Provisional	82.46
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	80.71

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=3.7e-67  Score=489.03  Aligned_cols=271  Identities=65%  Similarity=1.105  Sum_probs=264.1

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCCCCCCCCCcccccchhHHHHHHHHHHHHHHHHHHHhhcccchhc
Q 021439            1 MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVT   80 (312)
Q Consensus         1 ~~~~~~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~fap~slV~   80 (312)
                      |++|+++|+.+|+.||++++.++++|||+++|..+.+.|+++++++|+++|+||+|+++|++||++||+||+|||++||+
T Consensus        15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~ra~~gg~~yl~~~~Ww~G~ltm~vGei~NFaAYaFAPasLVt   94 (335)
T KOG2922|consen   15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLRAGEGGYGYLKEPLWWAGMLTMIVGEIANFAAYAFAPASLVT   94 (335)
T ss_pred             hccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhcccccCCCcchhhhHHHHHHHHHHHHHhHhhHHHHhhchHhhhc
Confidence            78999999999999999999999999999999998788999899999999999999999999999999999999999999


Q ss_pred             cchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeecCCccCcCCHHHHHHHhcChhHHHHHHHHHHHHHHHH
Q 021439           81 PLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLI  160 (312)
Q Consensus        81 PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~p~~~~~~t~~el~~~~~~~~fl~y~~~~~~~~~~li  160 (312)
                      ||||+|+++|+++|+++|||+++..+.+||++|++|++++|+|+|+|++..|++|+|+++++|+|++|+.+.++++++++
T Consensus        95 PLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~~~il~  174 (335)
T KOG2922|consen   95 PLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILIVLILI  174 (335)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999988999


Q ss_pred             hhhcccCCCcchhhhhhhHhhhhhhHHHHHHHHHHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHh---------
Q 021439          161 LYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN---------  231 (312)
Q Consensus       161 ~~~~~r~g~~~~l~y~~i~g~lg~~tvl~~K~~~~~l~~~~~G~~~~~~~~~y~li~~~v~~~~~Q~~~LN---------  231 (312)
                      ++..||+|++|+++|+.+|+++|++||+++|+++.+++++++|++|+.+|+||+++++++.|+.+|++|||         
T Consensus       175 ~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fnts  254 (335)
T KOG2922|consen  175 FFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTS  254 (335)
T ss_pred             eeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999         


Q ss_pred             ---------------------h-cccCCCHHHHHHHHHHHHHHhhheeeecccCCCCCCccc
Q 021439          232 ---------------------M-DYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLIT  271 (312)
Q Consensus       232 ---------------------f-e~~~~~~~~i~~~~~G~~~i~~GV~lLs~~~~~~~~~~~  271 (312)
                                           | ||++++..|+.+++||+++++.|+|+|+++||++++++.
T Consensus       255 lV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~~~~s  316 (335)
T KOG2922|consen  255 IVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEISLAS  316 (335)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccccccccc
Confidence                                 3 999999999999999999999999999999999985544

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=100.00  E-value=7e-61  Score=453.57  Aligned_cols=269  Identities=46%  Similarity=0.795  Sum_probs=257.2

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCCCCCCCCCcccccchhHHHHHHHHHHHHHHHHHHHhhcccchhc
Q 021439            1 MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVT   80 (312)
Q Consensus         1 ~~~~~~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~fap~slV~   80 (312)
                      |-+|+++|+.+|++||+++++|+++|||+++|+++++.|++.++++|+|||+||+|+++|++|+++|++||+|||+++||
T Consensus         1 ~~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~~~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~slv~   80 (300)
T PF05653_consen    1 MNTDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGGRSYLRRPLWWIGLLLMVLGEILNFVALGFAPASLVA   80 (300)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHhhHHHHHHHHHHhcchHHHHHHHHhhhHHHHH
Confidence            67899999999999999999999999999999987666665567899999999999999999999999999999999999


Q ss_pred             cchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeecCCccCcCCHHHHHHHhcChhHHHHHHHHHHHHHHHH
Q 021439           81 PLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLI  160 (312)
Q Consensus        81 PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~p~~~~~~t~~el~~~~~~~~fl~y~~~~~~~~~~li  160 (312)
                      |+|++++++|+++|++++|||++++|++|+++|++|++++++++|++++.+|++|+++++++|+|+.|+.+..++.++++
T Consensus        81 Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~y~~~~~~~~~~L~  160 (300)
T PF05653_consen   81 PLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLVYFILVLVLILILI  160 (300)
T ss_pred             HHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceehhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999888777787


Q ss_pred             hhhcccCCCcchhhhhhhHhhhhhhHHHHHHHHHHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHh---------
Q 021439          161 LYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLN---------  231 (312)
Q Consensus       161 ~~~~~r~g~~~~l~y~~i~g~lg~~tvl~~K~~~~~l~~~~~G~~~~~~~~~y~li~~~v~~~~~Q~~~LN---------  231 (312)
                      ++..||+|++++++|.++||++|++|++++|++++.++++++|+|||.+|.+|++++++++|++.|++|||         
T Consensus       161 ~~~~~r~g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~  240 (300)
T PF05653_consen  161 FFIKPRYGRRNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTS  240 (300)
T ss_pred             HhhcchhcccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccce
Confidence            88889999999999999999999999999999999999999999999999999999999999999999999         


Q ss_pred             ---------------------h-cccCCCHHHHHHHHHHHHHHhhheeeecccCCCCCCc
Q 021439          232 ---------------------M-DYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL  269 (312)
Q Consensus       232 ---------------------f-e~~~~~~~~i~~~~~G~~~i~~GV~lLs~~~~~~~~~  269 (312)
                                           | ||+++++++++++.+|+++++.||++|+.+||+++.|
T Consensus       241 ~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~~~~  300 (300)
T PF05653_consen  241 LVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKEISQ  300 (300)
T ss_pred             EEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchhccC
Confidence                                 2 9999999999999999999999999999999998754

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.62  E-value=1.5e-07  Score=79.08  Aligned_cols=114  Identities=17%  Similarity=0.145  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhhhcCCCCCCCC--Ccccccch--hHHHHHHHHHHHHHHHHHHHhhcccchhccc
Q 021439            7 IGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSG--GYGYLLEP--LWWVGMFTMIVGEIANFVAYIYAPAVLVTPL   82 (312)
Q Consensus         7 iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~~~~~~~~--~~~~l~~p--~W~~G~~l~~~g~~~~~~Al~fap~slV~PL   82 (312)
                      +|.++.+.+.++.+.|.++-|++..+.++.+.... .  ......+|  .-+.|+.+++++......++...|++...|+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~~~~~~~~~~p~~~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~   80 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-FIAALLAFGLALRAVLLGLAGYALSMLCWLKALRYLPLSRAYPL   80 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHH
Confidence            46788889999999999999999887653211100 0  01223456  6788999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHH--HhccccccchhhhHHHHhhhheeEE
Q 021439           83 GALSIIVSAVLAHF--MLNEKLQKMGMLGCLLCVVGSTMIV  121 (312)
Q Consensus        83 gal~lv~~~~la~~--~l~e~l~~~~~~G~~l~~~G~~lvv  121 (312)
                      -+...++..+.+..  ++||+++..+++|++++++|+.++.
T Consensus        81 ~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         81 LSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            99998888888885  7999999999999999999998864

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.53  E-value=8e-07  Score=74.22  Aligned_cols=113  Identities=25%  Similarity=0.370  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHhhhhcC---CCCC--------------CC-CCcccccchhHHHHH---HHHHHHHHHH
Q 021439            9 FILAVVSSAFIGSSFIIKKKGLRKAGAN---GARA--------------GS-GGYGYLLEPLWWVGM---FTMIVGEIAN   67 (312)
Q Consensus         9 v~LAl~ss~~ia~G~vlqk~~~~~~~~~---~~~~--------------~~-~~~~~l~~p~W~~G~---~l~~~g~~~~   67 (312)
                      ...|+.|++|-++..++-|-+....+..   ..|+              |. +...-...+.|.-=.   +.-.++-.+.
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Y   84 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLY   84 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHH
Confidence            4678889999999999999887643221   0000              00 000111223332211   2234566789


Q ss_pred             HHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEE
Q 021439           68 FVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIV  121 (312)
Q Consensus        68 ~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv  121 (312)
                      |.|+.-++++.|+|+-..|+++..+++..+||||++...|+|+.++++|++++.
T Consensus        85 f~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          85 FRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999999999999999998864

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.43  E-value=1.3e-06  Score=71.46  Aligned_cols=101  Identities=14%  Similarity=0.206  Sum_probs=79.4

Q ss_pred             HHHHHHHHHHHHHHHHHhHHhhhhcCCCCCCCCCcccccchhHHHHH--HHHHHHHHHHHHHHhhcccchhccchhHHHH
Q 021439           11 LAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGM--FTMIVGEIANFVAYIYAPAVLVTPLGALSII   88 (312)
Q Consensus        11 LAl~ss~~ia~G~vlqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~--~l~~~g~~~~~~Al~fap~slV~PLgal~lv   88 (312)
                      +-+.+.++...|.+..|++.++.+.       + + ...++.+|.+.  ..+.++..+...++...|++...|+.+++.+
T Consensus         5 ~l~~ai~~ev~g~~~lK~s~~~~~~-------~-~-~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v   75 (111)
T PRK15051          5 TLVFASLLSVAGQLCQKQATRPVAI-------G-K-RRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFV   75 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCc-------c-h-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHH
Confidence            3455667778888888887433211       0 1 11134455555  5577888899999999999999999999999


Q ss_pred             HHHHHHHHHhccccccchhhhHHHHhhhheeE
Q 021439           89 VSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (312)
Q Consensus        89 ~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lv  120 (312)
                      ++.+++.+++|||++.++++|+++++.|++++
T Consensus        76 ~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         76 WVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999998765

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.41  E-value=8.3e-07  Score=72.21  Aligned_cols=67  Identities=31%  Similarity=0.474  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEee
Q 021439           56 GMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLH  123 (312)
Q Consensus        56 G~~l~~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~  123 (312)
                      |++....+..+.+.|+.++| ..++|+.+++.+++.+++..++|||++++.+.|++++.+|++++...
T Consensus        41 g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   41 GLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWS  107 (113)
T ss_pred             HHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence            33444577889999999999 59999999999999999999999999999999999999999887553

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=98.33  E-value=8.8e-07  Score=72.77  Aligned_cols=102  Identities=20%  Similarity=0.230  Sum_probs=80.8

Q ss_pred             HHHHHHHHhHHhhhhcCCCC--CCCCCcccccchhHHHHHHHHHHHHHHHHHHHhhcccchhccch-hHHHHHHHHHHHH
Q 021439           20 GSSFIIKKKGLRKAGANGAR--AGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLG-ALSIIVSAVLAHF   96 (312)
Q Consensus        20 a~G~vlqk~~~~~~~~~~~~--~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~fap~slV~PLg-al~lv~~~~la~~   96 (312)
                      +...-+.||+....++....  .-.+.+..++||..++++++...|.+..+..++-+|.|+..|+. +++.+++++.+.+
T Consensus         9 G~Tnpfik~g~~~~~~~~~~~~~~~~~~~Ll~n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~   88 (113)
T PF10639_consen    9 GCTNPFIKRGSSGLEKVKASLQLLQEIKFLLLNPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWL   88 (113)
T ss_pred             cCchHHHHHHHhhcCCccchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHH
Confidence            44455677776544432111  11223467899999999999999999999999999999999996 9999999999977


Q ss_pred             HhccccccchhhhHHHHhhhheeEE
Q 021439           97 MLNEKLQKMGMLGCLLCVVGSTMIV  121 (312)
Q Consensus        97 ~l~e~l~~~~~~G~~l~~~G~~lvv  121 (312)
                      +-+|..+++.++|+.+++.|+.+.+
T Consensus        89 lge~~~~~~~~~G~~Li~~Gv~Lcv  113 (113)
T PF10639_consen   89 LGEEVISRRTWLGMALILAGVALCV  113 (113)
T ss_pred             hcCcccchhHHHHHHHHHcCeeeeC
Confidence            7677778888999999999988753

Many members are annotated as potential transmembrane proteins.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.29  E-value=7.4e-05  Score=69.82  Aligned_cols=114  Identities=24%  Similarity=0.261  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHhhhhcC-------------C---CCCCCCCcccccchhHHH---HHHHHHHHHHHHHH
Q 021439            9 FILAVVSSAFIGSSFIIKKKGLRKAGAN-------------G---ARAGSGGYGYLLEPLWWV---GMFTMIVGEIANFV   69 (312)
Q Consensus         9 v~LAl~ss~~ia~G~vlqk~~~~~~~~~-------------~---~~~~~~~~~~l~~p~W~~---G~~l~~~g~~~~~~   69 (312)
                      ..+.+.++++.+...++.||...+++.-             .   .+......+..++..|+.   +......+..+.+.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDFLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQ   82 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence            5678899999999999999754442210             0   000000111112222211   22234455667788


Q ss_pred             HHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEe
Q 021439           70 AYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVL  122 (312)
Q Consensus        70 Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~  122 (312)
                      ++.++|.+..+|+...+.++.++++..++|||+++++|.|+++++.|+.++..
T Consensus        83 a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        83 AYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999887653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.18  E-value=6.8e-05  Score=72.57  Aligned_cols=77  Identities=23%  Similarity=0.444  Sum_probs=65.3

Q ss_pred             ccchhHHHHHH--HHHHHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeec
Q 021439           48 LLEPLWWVGMF--TMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHA  124 (312)
Q Consensus        48 l~~p~W~~G~~--l~~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~  124 (312)
                      +++|.|.-=++  +.+.|+-....||.+.+.+-+|=|...+.+++++++.++||||+++.+++|+++|++|.++++...
T Consensus        75 ~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD  153 (334)
T PF06027_consen   75 LKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD  153 (334)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence            44555543333  346778888899999999999999999999999999999999999999999999999988876653

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.10  E-value=5.1e-05  Score=71.72  Aligned_cols=75  Identities=15%  Similarity=0.365  Sum_probs=68.2

Q ss_pred             chhHHHHHHH---HHHHHHHHHHHHhhcccchhccchh-HHHHHHHHHHHHHhccccccch----hhhHHHHhhhheeEE
Q 021439           50 EPLWWVGMFT---MIVGEIANFVAYIYAPAVLVTPLGA-LSIIVSAVLAHFMLNEKLQKMG----MLGCLLCVVGSTMIV  121 (312)
Q Consensus        50 ~p~W~~G~~l---~~~g~~~~~~Al~fap~slV~PLga-l~lv~~~~la~~~l~e~l~~~~----~~G~~l~~~G~~lvv  121 (312)
                      ...|..|++.   +..|+++.+.|.....+++-.|+.. +.++++.+++.+++||+.++++    ..|++++++|++++.
T Consensus        56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~  135 (290)
T TIGR00776        56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS  135 (290)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence            4666778887   8899999999999999999999999 9999999999999999999999    999999999988876


Q ss_pred             eec
Q 021439          122 LHA  124 (312)
Q Consensus       122 ~~~  124 (312)
                      ...
T Consensus       136 ~~~  138 (290)
T TIGR00776       136 RSK  138 (290)
T ss_pred             ecc
Confidence            654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.96  E-value=0.00065  Score=61.95  Aligned_cols=69  Identities=22%  Similarity=0.270  Sum_probs=61.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEe
Q 021439           54 WVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVL  122 (312)
Q Consensus        54 ~~G~~l~~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~  122 (312)
                      ..|.+.+.++..+.+.|+.+.|.+..+++..+..+++++++..++|||++++++.|+.++++|+.++..
T Consensus        51 ~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~  119 (260)
T TIGR00950        51 LLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLS  119 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhcc
Confidence            344455667788899999999999999999999999999999999999999999999999999888753

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.85  E-value=5.3e-05  Score=71.37  Aligned_cols=124  Identities=17%  Similarity=0.100  Sum_probs=91.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCCC--------------CCCCCCcccccch----hHHHHHHHHHHHHHH
Q 021439            5 NLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGA--------------RAGSGGYGYLLEP----LWWVGMFTMIVGEIA   66 (312)
Q Consensus         5 ~~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~~~--------------~~~~~~~~~l~~p----~W~~G~~l~~~g~~~   66 (312)
                      ..+|.++++.++++.+...++.||...+.+....              -...+........    .++.|+...+++..+
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l  225 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSL  225 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3579999999999999999988875433221000              0000000111111    246666667788889


Q ss_pred             HHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeecCCcc
Q 021439           67 NFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEE  128 (312)
Q Consensus        67 ~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~p~~~  128 (312)
                      +..++...|++.++++..+..+++.+++.+++||+++..+++|.++++.|+.......++|+
T Consensus       226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~  287 (293)
T PRK10532        226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREP  287 (293)
T ss_pred             HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            99999999999999999999999999999999999999999999999999877655444443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.65  E-value=0.0034  Score=59.22  Aligned_cols=112  Identities=23%  Similarity=0.301  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHhhhhcC---CCCCCC-C--Ccccc---cch---hHHHHHHHHHHHHHHHHHHHhh-ccc
Q 021439           10 ILAVVSSAFIGSSFIIKKKGLRKAGAN---GARAGS-G--GYGYL---LEP---LWWVGMFTMIVGEIANFVAYIY-APA   76 (312)
Q Consensus        10 ~LAl~ss~~ia~G~vlqk~~~~~~~~~---~~~~~~-~--~~~~l---~~p---~W~~G~~l~~~g~~~~~~Al~f-ap~   76 (312)
                      .+++..+++-+......|....+.+..   ..|..- .  .....   |++   .-..|+........+.+.++.+ .|.
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a   86 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFGQFAFLFCAINFGMPA   86 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence            446777788888888888765432210   011100 0  00011   111   1111222222233455666666 477


Q ss_pred             chhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEE
Q 021439           77 VLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIV  121 (312)
Q Consensus        77 slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv  121 (312)
                      ...+-+.....++..+++++++|||+++++++|+++.++|+.++.
T Consensus        87 ~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~  131 (299)
T PRK11453         87 GLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLI  131 (299)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence            777778888889999999999999999999999999999988765

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.59  E-value=0.00056  Score=56.87  Aligned_cols=73  Identities=15%  Similarity=0.168  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccchhccc-hhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeecC
Q 021439           53 WWVGMFTMIVGEIANFVAYIYAPAVLVTPL-GALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP  125 (312)
Q Consensus        53 W~~G~~l~~~g~~~~~~Al~fap~slV~PL-gal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~p  125 (312)
                      |+..++++.++..+-..|+...|.++.-|+ .+++.+...+.+.++.||+++..+++|+.++++|++.+=..++
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            455566777888888889999999999999 5799999999999999999999999999999999987755444

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.57  E-value=0.0003  Score=68.73  Aligned_cols=123  Identities=19%  Similarity=0.227  Sum_probs=85.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC-------------------CCCCCCCcccccc-hhHHHHHHHH----
Q 021439            5 NLIGFILAVVSSAFIGSSFIIKKKGLRKAGANG-------------------ARAGSGGYGYLLE-PLWWVGMFTM----   60 (312)
Q Consensus         5 ~~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~~-------------------~~~~~~~~~~l~~-p~W~~G~~l~----   60 (312)
                      ..+|.++++.|+++.+++.++|||-..+-+...                   ...+.+....... ..|+..++..    
T Consensus       187 ~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t  266 (358)
T PLN00411        187 WLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIIT  266 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHH
Confidence            467999999999999999999998655432100                   0000000000100 1111222212    


Q ss_pred             HHHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeecCCc
Q 021439           61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLE  127 (312)
Q Consensus        61 ~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~p~~  127 (312)
                      .+++.++.-+....+++.++...-+..+++++++..+++|+++...++|+++++.|+.++.....+|
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            2245566778889999999999999999999999999999999999999999999988765444444

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.53  E-value=0.0051  Score=57.94  Aligned_cols=65  Identities=20%  Similarity=0.295  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeE
Q 021439           55 VGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (312)
Q Consensus        55 ~G~~l~~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lv  120 (312)
                      .|+. +.+...++..++.+.+++..+=+-+.+.+++++++++++|||++++.+.|.+++++|+.+.
T Consensus        71 ~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~  135 (302)
T TIGR00817        71 VAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA  135 (302)
T ss_pred             HHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence            4444 4666788999999999999999999999999999999999999999999999999999754

specificities overlap.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.51  E-value=0.0046  Score=60.48  Aligned_cols=59  Identities=15%  Similarity=0.450  Sum_probs=53.7

Q ss_pred             HHHHHHHHhhcccchhccchhHHHHHHHHHHHHH------hccccccchhhhHHHHhhhheeEEe
Q 021439           64 EIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFM------LNEKLQKMGMLGCLLCVVGSTMIVL  122 (312)
Q Consensus        64 ~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~------l~e~l~~~~~~G~~l~~~G~~lvv~  122 (312)
                      ..+.+.++.+.|++..+=+.....++.+++++++      +|||++++.++|++++++|+.++..
T Consensus        92 ~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         92 VITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            3467889999999999999999999999999999      6999999999999999999876544

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.49  E-value=0.00074  Score=61.58  Aligned_cols=114  Identities=17%  Similarity=0.171  Sum_probs=85.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC---CC--------------CCCCCcccccchhHH----HHHHHHHH
Q 021439            4 SNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANG---AR--------------AGSGGYGYLLEPLWW----VGMFTMIV   62 (312)
Q Consensus         4 ~~~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~~---~~--------------~~~~~~~~l~~p~W~----~G~~l~~~   62 (312)
                      +...|..+++.++++.+...++.||...+.+...   .+              ...+.......+.|+    .|....++
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTAL  204 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHH
Confidence            3467999999999999999999999654322100   00              000001111222332    33334467


Q ss_pred             HHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhh
Q 021439           63 GEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGS  117 (312)
Q Consensus        63 g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~  117 (312)
                      +..+.+.++...|+..++.+..+..++..+++.+++||+++..++.|+.+++.|+
T Consensus       205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            7888999999999999999999999999999999999999999999999999886

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.49  E-value=0.0028  Score=59.62  Aligned_cols=66  Identities=17%  Similarity=0.276  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHHH-hhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEE
Q 021439           55 VGMFTMIVGEIANFVAY-IYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIV  121 (312)
Q Consensus        55 ~G~~l~~~g~~~~~~Al-~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv  121 (312)
                      .|.+....+..+.+.+. ...|....+-+-.+..++..+++++ +|||++++++.|.++.++|+.++.
T Consensus        74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~  140 (292)
T PRK11272         74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLN  140 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHh
Confidence            34444445556667777 8888888888999999999999975 699999999999999999987653

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.48  E-value=0.00082  Score=55.03  Aligned_cols=75  Identities=16%  Similarity=0.235  Sum_probs=63.2

Q ss_pred             chhHHHH-HHHHHHHHHHHHHHHhhcccchhccc-hhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeec
Q 021439           50 EPLWWVG-MFTMIVGEIANFVAYIYAPAVLVTPL-GALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHA  124 (312)
Q Consensus        50 ~p~W~~G-~~l~~~g~~~~~~Al~fap~slV~PL-gal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~  124 (312)
                      ++.|.+. ++.++++..+-..|+...|.++.-|+ .+++.+.+.+.+.++.||+++..+++|..++++|++++-..+
T Consensus        29 ~~~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         29 RLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4555444 44567777777788999999999999 779999999999999999999999999999999998874443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.42  E-value=9.9e-05  Score=58.97  Aligned_cols=68  Identities=25%  Similarity=0.454  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeE
Q 021439           53 WWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (312)
Q Consensus        53 W~~G~~l~~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lv  120 (312)
                      ...|.+...++..+...++...|.+.++++..+..+++.+++..++||+++++++.|+.+++.|+.++
T Consensus        57 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   57 LFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             hHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            33444445678889999999999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.34  E-value=0.012  Score=55.33  Aligned_cols=80  Identities=13%  Similarity=0.292  Sum_probs=67.6

Q ss_pred             hhHHHHHHH---HHHHHHHHHHHHhhcccchhccch-hHHHHHHHHHHHHHhccccccchh----hhHHHHhhhheeEEe
Q 021439           51 PLWWVGMFT---MIVGEIANFVAYIYAPAVLVTPLG-ALSIIVSAVLAHFMLNEKLQKMGM----LGCLLCVVGSTMIVL  122 (312)
Q Consensus        51 p~W~~G~~l---~~~g~~~~~~Al~fap~slV~PLg-al~lv~~~~la~~~l~e~l~~~~~----~G~~l~~~G~~lvv~  122 (312)
                      ..|+.+++.   -.+|+++|+.++.....|.-.|++ +..++.|.+.+.++++|-=+..++    .+.+++++|+.+-..
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            678888874   468999999999999999999998 899999999999999998776664    688999999988766


Q ss_pred             ecCCccCc
Q 021439          123 HAPLEESL  130 (312)
Q Consensus       123 ~~p~~~~~  130 (312)
                      ...++++.
T Consensus       123 ~~~~~~~~  130 (269)
T PF06800_consen  123 QDKKSDKS  130 (269)
T ss_pred             cccccccc
Confidence            65555543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.32  E-value=0.058  Score=49.05  Aligned_cols=71  Identities=25%  Similarity=0.391  Sum_probs=60.8

Q ss_pred             HHHHHHHHHHHHHHHhhcccchhccchhHHHHHHHHHHH-HHhccccccchhhhHHHHhhhheeEEeecCCc
Q 021439           57 MFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAH-FMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLE  127 (312)
Q Consensus        57 ~~l~~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~-~~l~e~l~~~~~~G~~l~~~G~~lvv~~~p~~  127 (312)
                      ...+..+..+.+.++...|....+++...+.++..+++. +++|||++++++.|..+...|+.++...+..+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~  148 (292)
T COG0697          77 LLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG  148 (292)
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc
Confidence            334556678899999999999999999999999999997 77799999999999999999998876544433

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.30  E-value=0.00067  Score=63.38  Aligned_cols=113  Identities=17%  Similarity=0.122  Sum_probs=79.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhhhcCCCC----C-----C-----------CCCcccccchhHH----HHHHHHHH
Q 021439            7 IGFILAVVSSAFIGSSFIIKKKGLRKAGANGAR----A-----G-----------SGGYGYLLEPLWW----VGMFTMIV   62 (312)
Q Consensus         7 iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~~~~----~-----~-----------~~~~~~l~~p~W~----~G~~l~~~   62 (312)
                      -|..+++.++++.+.+.++.|+...+.+.....    .     .           .+.......+.||    .+.....+
T Consensus       144 ~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l  223 (281)
T TIGR03340       144 KAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIGG  223 (281)
T ss_pred             hHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHH
Confidence            467788999999999988888753222110000    0     0           0000000111222    22333456


Q ss_pred             HHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhhee
Q 021439           63 GEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTM  119 (312)
Q Consensus        63 g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~l  119 (312)
                      ++.+.+.++...|++.++++.-++.+++.+++.+++||+++..+++|.+++++|+.+
T Consensus       224 ~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       224 AYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            777888999999999999999999999999999999999999999999999999764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=97.28  E-value=0.00049  Score=64.92  Aligned_cols=119  Identities=16%  Similarity=0.064  Sum_probs=87.4

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcC---CCCC--------------CC--CCcccccchhHH----HHHH
Q 021439            2 FSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGAN---GARA--------------GS--GGYGYLLEPLWW----VGMF   58 (312)
Q Consensus         2 ~~~~~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~---~~~~--------------~~--~~~~~l~~p~W~----~G~~   58 (312)
                      |++...|..+++.++++.+...+.-|.. .+.+..   ..|.              +.  ..++..+++.++    .|..
T Consensus         3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (296)
T PRK15430          3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAV   81 (296)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHH
Confidence            5677889999999999988888877753 211100   0000              00  000011223332    4455


Q ss_pred             HHHHHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEE
Q 021439           59 TMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIV  121 (312)
Q Consensus        59 l~~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv  121 (312)
                      .+.++..+.+.++.+.|.+..+-+.....++..++++.++|||+++++|.|+++..+|+++++
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            566778899999999999999999999999999999999999999999999999999988764

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.23  E-value=0.0034  Score=61.12  Aligned_cols=121  Identities=18%  Similarity=0.210  Sum_probs=90.1

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHhHHhhhh--------------------c-CCCCCCCCCccccc---chhHHHH
Q 021439            1 MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAG--------------------A-NGARAGSGGYGYLL---EPLWWVG   56 (312)
Q Consensus         1 ~~~~~~iGv~LAl~ss~~ia~G~vlqk~~~~~~~--------------------~-~~~~~~~~~~~~l~---~p~W~~G   56 (312)
                      |+.+..+|++..+++.++.+.=.+-|||. +.=+                    . -..+   +..++++   ...|..+
T Consensus         1 m~~~~~~G~~~~~i~~~~~GS~~~p~K~~-k~w~wE~~W~v~gi~~wl~~~~~~g~~~~~---~f~~~~~~~~~~~~~~~   76 (345)
T PRK13499          1 MSNAIILGIIWHLIGGASSGSFYAPFKKV-KKWSWETMWSVGGIFSWLILPWLIAALLLP---DFWAYYSSFSGSTLLPV   76 (345)
T ss_pred             CCchhHHHHHHHHHHHHHhhccccccccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHhcCHHHHHHH
Confidence            67889999999999999999999999882 2111                    0 0011   1122333   3567777


Q ss_pred             HHH---HHHHHHHHHHHHhhcccchhccch-hHHHHHHHHHHHHHhcccc---cc----chhhhHHHHhhhheeEEeecC
Q 021439           57 MFT---MIVGEIANFVAYIYAPAVLVTPLG-ALSIIVSAVLAHFMLNEKL---QK----MGMLGCLLCVVGSTMIVLHAP  125 (312)
Q Consensus        57 ~~l---~~~g~~~~~~Al~fap~slV~PLg-al~lv~~~~la~~~l~e~l---~~----~~~~G~~l~~~G~~lvv~~~p  125 (312)
                      ++.   -.+|++.++.+..+...++-.|++ +++++.+.++...+.+|=-   +.    ...+|++++++|+++....+.
T Consensus        77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence            753   468899999999999999999996 6889999999999988532   32    346999999999988766444

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.20  E-value=0.0014  Score=61.84  Aligned_cols=116  Identities=17%  Similarity=0.116  Sum_probs=83.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCCCC------------CCCCCcccccchhHHHHHH----HHHHHHHHHH
Q 021439            5 NLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGAR------------AGSGGYGYLLEPLWWVGMF----TMIVGEIANF   68 (312)
Q Consensus         5 ~~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~~~~------------~~~~~~~~l~~p~W~~G~~----l~~~g~~~~~   68 (312)
                      ...|..+++.++++.+.+.++.||-..+.+.....            .-.+....--++..|..++    ..++++.+..
T Consensus       154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l~~  233 (295)
T PRK11689        154 NPLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFFILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAAWN  233 (295)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            35699999999999999999999853322110000            0000000111122222222    2345677888


Q ss_pred             HHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeE
Q 021439           69 VAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (312)
Q Consensus        69 ~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lv  120 (312)
                      .++...|++.++++..+..+++.+++..++||+++...++|+++++.|+.+.
T Consensus       234 ~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~  285 (295)
T PRK11689        234 VGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC  285 (295)
T ss_pred             HHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence            9999999999999999999999999999999999999999999999997665

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.19  E-value=0.0017  Score=61.14  Aligned_cols=116  Identities=16%  Similarity=0.112  Sum_probs=84.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcC----------------CCCCCCCCcccccchhHH----HHHHHHHHHH
Q 021439            5 NLIGFILAVVSSAFIGSSFIIKKKGLRKAGAN----------------GARAGSGGYGYLLEPLWW----VGMFTMIVGE   64 (312)
Q Consensus         5 ~~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~----------------~~~~~~~~~~~l~~p~W~----~G~~l~~~g~   64 (312)
                      ...|..+++.++++.|.+.+.+||..++.+..                ..-.+...........|+    .|+...+++.
T Consensus       148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~  227 (292)
T PRK11272        148 NPWGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAI  227 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHH
Confidence            45799999999999999999998853221100                000000000001112333    2333445667


Q ss_pred             HHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeE
Q 021439           65 IANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (312)
Q Consensus        65 ~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lv  120 (312)
                      .+...++...|.+.+..+..+..+++++++.+++||+++..+++|+++++.|+.+.
T Consensus       228 ~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~  283 (292)
T PRK11272        228 SAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV  283 (292)
T ss_pred             HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence            78888999999999999999999999999999999999999999999999998765

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.11  E-value=0.043  Score=51.90  Aligned_cols=73  Identities=16%  Similarity=0.241  Sum_probs=64.5

Q ss_pred             HHHHHHHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeecCCccC
Q 021439           57 MFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEES  129 (312)
Q Consensus        57 ~~l~~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~p~~~~  129 (312)
                      -.++.++..++-.|+.+.|...-+=+-+..++++++++..++|+|.+++++++++++++|+.+..+...++++
T Consensus        71 ~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~  143 (303)
T PF08449_consen   71 SFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS  143 (303)
T ss_pred             HHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence            3556677788889999999999999999999999999999999999999999999999999988777654443

; GO: 0055085 transmembrane transport

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.07  E-value=0.0018  Score=60.02  Aligned_cols=71  Identities=20%  Similarity=0.323  Sum_probs=64.9

Q ss_pred             HHHHHHHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeecCCc
Q 021439           57 MFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLE  127 (312)
Q Consensus        57 ~~l~~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~p~~  127 (312)
                      -+++.+.+.+.++++...+.+.-|=+.-.-++++++++.++||+|+++++|++..+.++|++++-.....+
T Consensus        24 A~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   24 ALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            35789999999999999999999999999999999999999999999999999999999999876655443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.07  E-value=0.0035  Score=59.16  Aligned_cols=115  Identities=20%  Similarity=0.220  Sum_probs=81.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCCCCC-------------------CCCCcc-----cccchhHHHH-----
Q 021439            6 LIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARA-------------------GSGGYG-----YLLEPLWWVG-----   56 (312)
Q Consensus         6 ~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~~~~~-------------------~~~~~~-----~l~~p~W~~G-----   56 (312)
                      ..|..+++.++++.+...+++||-.++.+......                   .++...     .-.++.+|..     
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            47999999999999999999998533221100000                   000000     0012222332     


Q ss_pred             HHHHHHHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeE
Q 021439           57 MFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (312)
Q Consensus        57 ~~l~~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lv  120 (312)
                      ++..++++.+.+.++.-.+..-++++..+..+++.+++.++++|+++..+++|.+++++|+.+.
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~  285 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN  285 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence            3334556667777777788999999999999999999999999999999999999999998754

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.06  E-value=0.043  Score=51.70  Aligned_cols=115  Identities=15%  Similarity=0.140  Sum_probs=70.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHhhhhcC---CCCCCC--------CCcccccc---hhHHHHHHHHHHHHHHHHHHHhh
Q 021439            8 GFILAVVSSAFIGSSFIIKKKGLRKAGAN---GARAGS--------GGYGYLLE---PLWWVGMFTMIVGEIANFVAYIY   73 (312)
Q Consensus         8 Gv~LAl~ss~~ia~G~vlqk~~~~~~~~~---~~~~~~--------~~~~~l~~---p~W~~G~~l~~~g~~~~~~Al~f   73 (312)
                      +..+++.+.++-+..+...|.+....+.-   ..|..-        ..++..|+   +....|.+.+.....+.+.++.+
T Consensus         5 ~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~   84 (295)
T PRK11689          5 ATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVGFPRLRQFPKRYLLAGGLLFVSYEICLALSLGY   84 (295)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            34556667777777777777654432210   001000        00011111   11222333333444455556654


Q ss_pred             c----ccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEe
Q 021439           74 A----PAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVL  122 (312)
Q Consensus        74 a----p~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~  122 (312)
                      +    |....+-+..+..++..++++.++|||++++++.|+++..+|++++..
T Consensus        85 ~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~  137 (295)
T PRK11689         85 ANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLG  137 (295)
T ss_pred             hhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheec
Confidence            3    555556677888999999999999999999999999999999988764

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.83  E-value=0.0066  Score=47.93  Aligned_cols=65  Identities=15%  Similarity=0.059  Sum_probs=36.7

Q ss_pred             cchhHHHHHH-HHHHHHHHHHHHHhhcccchhccc-hhHHHHHHHHHHHHHhccccccchhhhHHHH
Q 021439           49 LEPLWWVGMF-TMIVGEIANFVAYIYAPAVLVTPL-GALSIIVSAVLAHFMLNEKLQKMGMLGCLLC  113 (312)
Q Consensus        49 ~~p~W~~G~~-l~~~g~~~~~~Al~fap~slV~PL-gal~lv~~~~la~~~l~e~l~~~~~~G~~l~  113 (312)
                      +++.|..+.+ .+.++..+-..|+...|.++.-|+ .+++.+...+.+.++.||+++..++.|+.++
T Consensus        27 ~~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   27 TQLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             -------HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3455555555 577788888889999999999997 4699999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.73  E-value=0.019  Score=47.00  Aligned_cols=97  Identities=13%  Similarity=0.104  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHhhhhcCCCCCCCCCcccccchhHHHHHHH-HHHHHHHHHHHHhhcccchhccch-hH
Q 021439            8 GFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFT-MIVGEIANFVAYIYAPAVLVTPLG-AL   85 (312)
Q Consensus         8 Gv~LAl~ss~~ia~G~vlqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l-~~~g~~~~~~Al~fap~slV~PLg-al   85 (312)
                      ....=+.+.++--.|....|++    +            -+++|.|...++. +.++..+--.|+...|..+.-|+= ++
T Consensus         8 ~~~~L~~Ai~~Ev~~t~~Lk~s----~------------gf~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~Gi   71 (109)
T PRK10650          8 HAAWLALAIVLEIVANIFLKFS----D------------GFRRKIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGF   71 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh----c------------CCcchHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHH
Confidence            3333344555556666666654    1            1345666655543 455555666677788888887764 58


Q ss_pred             HHHHHHHHHHHHhccccccchhhhHHHHhhhheeE
Q 021439           86 SIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (312)
Q Consensus        86 ~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lv  120 (312)
                      +.+...+.+.++.||+++..++.|..+++.|++.+
T Consensus        72 G~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         72 GIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            88999999999999999999999999999998764

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=96.61  E-value=0.038  Score=52.38  Aligned_cols=76  Identities=18%  Similarity=0.221  Sum_probs=65.9

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEee
Q 021439           48 LLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLH  123 (312)
Q Consensus        48 l~~p~W~~G~~l~~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~  123 (312)
                      ++-.....=.++.+.|..+..+++-+..++--|-+=..-++|..+|+..+||++++.+.|+|+..+++|.+.+...
T Consensus        84 f~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   84 FNPVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             CCcceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            3334444456788899999999999999999999999999999999999999999999999999999998776554

>TIGR00688 rarD rarD protein

Probab=96.49  E-value=0.0039  Score=57.22  Aligned_cols=62  Identities=11%  Similarity=0.134  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEE
Q 021439           60 MIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIV  121 (312)
Q Consensus        60 ~~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv  121 (312)
                      +..+..+.+.|+...|..-.+-+...+.++.++++++++|||+++++|.|+++..+|+++++
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            45667889999999999999999999999999999999999999999999999999987654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=96.48  E-value=0.3  Score=45.93  Aligned_cols=112  Identities=13%  Similarity=0.114  Sum_probs=70.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcC---CCCCC----------CCCcccccchhH----HHHHHHHHHHHHH
Q 021439            4 SNLIGFILAVVSSAFIGSSFIIKKKGLRKAGAN---GARAG----------SGGYGYLLEPLW----WVGMFTMIVGEIA   66 (312)
Q Consensus         4 ~~~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~---~~~~~----------~~~~~~l~~p~W----~~G~~l~~~g~~~   66 (312)
                      |...|+.+.+.+.++.+.+.++-|.+....+..   ..|..          ...+...+++.|    +.|.. +.....+
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~   87 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVS-LGGMNYL   87 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHH-HHHHHHH
Confidence            456788999999999999999999865442210   00100          000011122223    55543 4556677


Q ss_pred             HHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEe
Q 021439           67 NFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVL  122 (312)
Q Consensus        67 ~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~  122 (312)
                      .+.++.+.|.....-+...+.++.+++++    |+.  .++.+..++++|+.+++.
T Consensus        88 ~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~--~~~~~~~i~~~Gv~li~~  137 (293)
T PRK10532         88 FYLSIQTVPLGIAVALEFTGPLAVALFSS----RRP--VDFVWVVLAVLGLWFLLP  137 (293)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHHHHHhc----CCh--HHHHHHHHHHHHHheeee
Confidence            88889999999877666677777776653    443  346677888899877654

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.46  E-value=0.024  Score=46.04  Aligned_cols=72  Identities=17%  Similarity=0.049  Sum_probs=57.4

Q ss_pred             cchhHHHHHH-HHHHHHHHHHHHHhhcccchhccch-hHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeE
Q 021439           49 LEPLWWVGMF-TMIVGEIANFVAYIYAPAVLVTPLG-ALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (312)
Q Consensus        49 ~~p~W~~G~~-l~~~g~~~~~~Al~fap~slV~PLg-al~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lv  120 (312)
                      +++.|+..++ .+.++..+--.|+...|..+.-++= +++.+.+.+.+.++.||+++..+++|+.+++.|++.+
T Consensus        27 ~~~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         27 SRLTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            3566655544 3556666666677788888887764 4899999999999999999999999999999998765

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.32  E-value=0.016  Score=52.70  Aligned_cols=115  Identities=23%  Similarity=0.229  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC-CC--------------CCCCC-ccc-ccchhHHHH--HHHHHHHHHH
Q 021439            6 LIGFILAVVSSAFIGSSFIIKKKGLRKAGANG-AR--------------AGSGG-YGY-LLEPLWWVG--MFTMIVGEIA   66 (312)
Q Consensus         6 ~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~~-~~--------------~~~~~-~~~-l~~p~W~~G--~~l~~~g~~~   66 (312)
                      ..|..+++.++++.+...+.+|+-. +.+... ..              ...+. .+. .+...+...  +...+++..+
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~  231 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLL  231 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            5899999999999999999998754 211100 00              00000 011 111222222  2222345677


Q ss_pred             HHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEE
Q 021439           67 NFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIV  121 (312)
Q Consensus        67 ~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv  121 (312)
                      .+-++...|...++|+..+..+++.+++..+++|+++..+++|+++++.|..+..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~  286 (292)
T COG0697         232 WYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence            8889999999999999999999999999999999999999999999999987653

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=96.02  E-value=0.021  Score=55.45  Aligned_cols=59  Identities=14%  Similarity=0.161  Sum_probs=54.7

Q ss_pred             HHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEE
Q 021439           63 GEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIV  121 (312)
Q Consensus        63 g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv  121 (312)
                      +..++..++.+.+++..+=+-+++.+++++++++++|||++++.+.+++++++|+.+.+
T Consensus       127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            34556699999999999999999999999999999999999999999999999998865

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.87  E-value=0.031  Score=54.73  Aligned_cols=89  Identities=16%  Similarity=0.189  Sum_probs=67.7

Q ss_pred             HHHHHHHHHHHHHH---HHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeecCCccCc
Q 021439           54 WVGMFTMIVGEIAN---FVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESL  130 (312)
Q Consensus        54 ~~G~~l~~~g~~~~---~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~p~~~~~  130 (312)
                      ..++....+-.+.|   =+||+|-.+.-.+=+.+.|=+|+..+|..+.+||+|....+++++++.|++++.....++.++
T Consensus       160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~  239 (416)
T KOG2765|consen  160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSD  239 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccccc
Confidence            34444433333333   368999999999999999999999999999999999999999999999999998876655433


Q ss_pred             C-----CHHHHHHHhcC
Q 021439          131 N-----SVQEIWVLATQ  142 (312)
Q Consensus       131 ~-----t~~el~~~~~~  142 (312)
                      .     ...+++.++..
T Consensus       240 ~~a~~~llG~llaL~sA  256 (416)
T KOG2765|consen  240 LPASRPLLGNLLALLSA  256 (416)
T ss_pred             CCccchhHHHHHHHHHH
Confidence            2     34455555533

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.83  E-value=0.47  Score=46.18  Aligned_cols=75  Identities=17%  Similarity=0.241  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeecCCccC
Q 021439           55 VGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEES  129 (312)
Q Consensus        55 ~G~~l~~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~p~~~~  129 (312)
                      +=-+++.+-+-++++++...|+..=|+..-+-++.++++...+|+||++++.|...++...|+.++=+..+++.+
T Consensus        97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~  171 (345)
T KOG2234|consen   97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTG  171 (345)
T ss_pred             HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCC
Confidence            334578887779999999999999999999999999999999999999999999999999999887544444433

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=95.72  E-value=0.068  Score=43.50  Aligned_cols=72  Identities=14%  Similarity=0.118  Sum_probs=57.5

Q ss_pred             cchhHHHHHHH-HHHHHHHHHHHHhhcccchhccc-hhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeE
Q 021439           49 LEPLWWVGMFT-MIVGEIANFVAYIYAPAVLVTPL-GALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (312)
Q Consensus        49 ~~p~W~~G~~l-~~~g~~~~~~Al~fap~slV~PL-gal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lv  120 (312)
                      +|+.|.+.++. +++...+-..|+...|..+.-++ .+++.+..++.+..+.||+++..+++|..++++|++.+
T Consensus        28 ~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          28 TRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL  101 (106)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence            35566665554 55666677777777888877664 67888899999999999999999999999999998764

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=95.55  E-value=0.014  Score=55.09  Aligned_cols=61  Identities=15%  Similarity=0.011  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEe
Q 021439           62 VGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVL  122 (312)
Q Consensus        62 ~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~  122 (312)
                      +++.+.+.++...|++.++++.-+..+++.+++.++++|+++...++|+++++.|+.++..
T Consensus       225 i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        225 VPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            5677889999999999999999999999999999999999999999999999999776543

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=95.15  E-value=0.043  Score=51.70  Aligned_cols=115  Identities=23%  Similarity=0.344  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHhhhhcC-C-CCC-C-----CCCcccccch--------hHHHHHHHHH-HHHHHHH
Q 021439            6 LIGFILAVVSSAFIGSSFIIKKKGLRKAGAN-G-ARA-G-----SGGYGYLLEP--------LWWVGMFTMI-VGEIANF   68 (312)
Q Consensus         6 ~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~-~-~~~-~-----~~~~~~l~~p--------~W~~G~~l~~-~g~~~~~   68 (312)
                      .+|+.+..+| .+.+...++-+|...-.+.. . .|- .     -...-|.+.|        .|++==..|. .|..+.+
T Consensus        37 ~~gl~l~~vs-~ff~~~~vv~t~~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvmlmy  115 (346)
T KOG4510|consen   37 NLGLLLLTVS-YFFNSCMVVSTKVLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVMLMY  115 (346)
T ss_pred             ccCceehhhH-HHHhhHHHhhhhhhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHHHHH
Confidence            3677788888 77777777766654433321 0 010 0     0001122222        2221111121 2444566


Q ss_pred             HHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEE
Q 021439           69 VAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIV  121 (312)
Q Consensus        69 ~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv  121 (312)
                      .||.+.|++=-.=+.-.+-+++.++|+.+||||+|+.|.+|+.....|+++++
T Consensus       116 ya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIv  168 (346)
T KOG4510|consen  116 YALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIV  168 (346)
T ss_pred             HHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEe
Confidence            66666655544445567889999999999999999999999999999999875

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=94.57  E-value=0.058  Score=50.99  Aligned_cols=114  Identities=19%  Similarity=0.196  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC-C-CCC----CC-----Cc---ccccchhHH----HHHHHHHHHHHHH
Q 021439            6 LIGFILAVVSSAFIGSSFIIKKKGLRKAGANG-A-RAG----SG-----GY---GYLLEPLWW----VGMFTMIVGEIAN   67 (312)
Q Consensus         6 ~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~~-~-~~~----~~-----~~---~~l~~p~W~----~G~~l~~~g~~~~   67 (312)
                      ..|+..++.|+++.+.-.+.-|+.. ..+..- . ...    ..     ..   +-...+.+|    .|+. ..+++.+.
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~ia~~~y  228 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAFG-VDGLSVLLPQAIGMVIGGIIFNLGHILAKPLKKYAILLNILPGLM-WGIGNFFY  228 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcC-CCcceehhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH-HHHHHHHH
Confidence            5799999999999988887777532 111100 0 000    00     00   011222444    3444 46677788


Q ss_pred             HHHHh-hcccchhccchhHHHHHHHHHHHHHhccccccchh----hhHHHHhhhheeEE
Q 021439           68 FVAYI-YAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGM----LGCLLCVVGSTMIV  121 (312)
Q Consensus        68 ~~Al~-fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~----~G~~l~~~G~~lvv  121 (312)
                      +.+.. ..+.+.-.++..+..+.+.+.+.+++||+.+++++    +|+++++.|+.++.
T Consensus       229 ~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       229 LFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            88888 99999999999999999999999999999999999    99999999988754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=94.44  E-value=0.39  Score=46.72  Aligned_cols=126  Identities=21%  Similarity=0.300  Sum_probs=78.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcC--------------CCCC-CCCCcccccchhHHHHHHHHHHH-HHH
Q 021439            3 SSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGAN--------------GARA-GSGGYGYLLEPLWWVGMFTMIVG-EIA   66 (312)
Q Consensus         3 ~~~~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~--------------~~~~-~~~~~~~l~~p~W~~G~~l~~~g-~~~   66 (312)
                      ++.++|=++++.|+++.|+..++|++-.++.+..              ..-. --+ +.-+++-.|=.......+| .++
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile-~~~i~~~~w~~~~~~~~v~~~~~  242 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILE-RSGIESIHWTSQVIGLLVGYALC  242 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhee-hhhhhccCCChhhHHHHHHHHHH
Confidence            4678999999999999999999999976653320              0000 000 1111111121122222233 334


Q ss_pred             HHHHHhhcccch------hccch-hHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeecCCccC
Q 021439           67 NFVAYIYAPAVL------VTPLG-ALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEES  129 (312)
Q Consensus        67 ~~~Al~fap~sl------V~PLg-al~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~p~~~~  129 (312)
                      .++-|...|..+      +..++ ..+-+++.++..++-|+++++.-++|-+++++|.++.....+++++
T Consensus       243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~  312 (334)
T PF06027_consen  243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEE  312 (334)
T ss_pred             HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccc
Confidence            555555555533      12222 3346788888999999999999999999999998887665554443

Some of the sequences in this family are annotated as putative membrane proteins.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=93.82  E-value=0.35  Score=40.33  Aligned_cols=56  Identities=18%  Similarity=0.424  Sum_probs=48.2

Q ss_pred             HHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhhee
Q 021439           64 EIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTM  119 (312)
Q Consensus        64 ~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~l  119 (312)
                      +..++..+....+.--+=++.+--+.+.+++..+.+|+++...+.|+.+++.|+.+
T Consensus        95 n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   95 NLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            34566667777777777888888999999999999999999999999999999764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=93.75  E-value=0.083  Score=49.67  Aligned_cols=117  Identities=15%  Similarity=0.242  Sum_probs=76.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCCCCC-------C----------CCCcccc----cc--------hhHH
Q 021439            4 SNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARA-------G----------SGGYGYL----LE--------PLWW   54 (312)
Q Consensus         4 ~~~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~~~~~-------~----------~~~~~~l----~~--------p~W~   54 (312)
                      .+..|..+++.|+++.++..++.||...+.+.+..+.       +          .+..+..    .+        ..|.
T Consensus       142 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (302)
T TIGR00817       142 FNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYT  221 (302)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHH
Confidence            3567999999999999999999888543111100000       0          0000000    00        1121


Q ss_pred             HHHHH----HHHHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeE
Q 021439           55 VGMFT----MIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (312)
Q Consensus        55 ~G~~l----~~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lv  120 (312)
                      .++..    +...+...+.++...+++-.+-.+.+--++..+++..+++|+++..+++|.++++.|+.+.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~  291 (302)
T TIGR00817       222 VSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY  291 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence            12111    1112234456777888888888888888999999999999999999999999999998764

specificities overlap.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=91.76  E-value=3.5  Score=39.30  Aligned_cols=76  Identities=20%  Similarity=0.262  Sum_probs=55.7

Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHhhcccc---hhccchh-HHHHHHHHHHHHHhccccccchhhhHHHHhhhheeE
Q 021439           45 YGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAV---LVTPLGA-LSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (312)
Q Consensus        45 ~~~l~~p~W~~G~~l~~~g~~~~~~Al~fap~s---lV~PLga-l~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lv  120 (312)
                      ++..|+|+=+....+-.+=...|..-|-+||-.   +=+.+|= +..++|.++++.++|||+++.+|+++.+..+|+...
T Consensus        63 ~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~  142 (293)
T COG2962          63 KQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ  142 (293)
T ss_pred             HHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence            346677766666665555556788777777765   2233332 234688999999999999999999999999998753

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=90.20  E-value=0.36  Score=39.36  Aligned_cols=78  Identities=18%  Similarity=0.279  Sum_probs=64.6

Q ss_pred             CcccccchhHHHHHHHHHHHHHHHHHHHhhcccchhccch-hHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEE
Q 021439           44 GYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLG-ALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIV  121 (312)
Q Consensus        44 ~~~~l~~p~W~~G~~l~~~g~~~~~~Al~fap~slV~PLg-al~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv  121 (312)
                      .+..+.++..|+=+++---|....+.-++-+|.++-.|+. +++..|++++...+-.|.-.++...|+.++++|+.+.+
T Consensus        46 ~~tl~l~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   46 MKTLFLNWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHhHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            3456778888999999889999999999999999999985 67889999988776444455777899999999986643

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=89.94  E-value=2.8  Score=39.48  Aligned_cols=122  Identities=17%  Similarity=0.151  Sum_probs=85.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcC---------------CCCCCCCCcccccchhHHHHHHHHHHH----H
Q 021439            4 SNLIGFILAVVSSAFIGSSFIIKKKGLRKAGAN---------------GARAGSGGYGYLLEPLWWVGMFTMIVG----E   64 (312)
Q Consensus         4 ~~~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~~---------------~~~~~~~~~~~l~~p~W~~G~~l~~~g----~   64 (312)
                      -.-+|+.+|+.+..|-+.=.+.-||.-...+..               +.-....+...+.-+.=..++..-+++    +
T Consensus       145 lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPY  224 (292)
T COG5006         145 LDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPY  224 (292)
T ss_pred             CCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccch
Confidence            356899999999999887777777754221110               000011112233333444444444444    4


Q ss_pred             HHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeecC
Q 021439           65 IANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP  125 (312)
Q Consensus        65 ~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~p  125 (312)
                      .+..+|+.-.|...-.-+.++--.+.++....+|||++|..+|+|+++++.++.-......
T Consensus       225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~  285 (292)
T COG5006         225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR  285 (292)
T ss_pred             HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence            5889999999999999999999999999999999999999999999999999875544333

>TIGR00803 nst UDP-galactose transporter

Probab=89.70  E-value=1.3  Score=39.76  Aligned_cols=116  Identities=18%  Similarity=0.251  Sum_probs=78.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhhc-----C-------------C--CCCCC--CCcccc--cchhHHHHHHH
Q 021439            4 SNLIGFILAVVSSAFIGSSFIIKKKGLRKAGA-----N-------------G--ARAGS--GGYGYL--LEPLWWVGMFT   59 (312)
Q Consensus         4 ~~~iGv~LAl~ss~~ia~G~vlqk~~~~~~~~-----~-------------~--~~~~~--~~~~~l--~~p~W~~G~~l   59 (312)
                      +...|+...+.+.++.+..-+.|+|..++.+.     .             .  .+++.  ...+.+  ..+.+|.-.++
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLL  161 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHH
Confidence            45667766667777778888888887544210     0             0  00000  001111  12333333344


Q ss_pred             HHHHHHHHHHHHhhcccchhccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhhee
Q 021439           60 MIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTM  119 (312)
Q Consensus        60 ~~~g~~~~~~Al~fap~slV~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~l  119 (312)
                      ..+|..+-...+.+++.....=...+..+++.+++.++.+|+++...|.|+.++..|..+
T Consensus       162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            566666666778888888999999999999999999999999999999999999988653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=85.20  E-value=4.5  Score=32.87  Aligned_cols=46  Identities=20%  Similarity=0.401  Sum_probs=37.7

Q ss_pred             ccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeecCC
Q 021439           80 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPL  126 (312)
Q Consensus        80 ~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~p~  126 (312)
                      +.-|.+-++.+..-....-|.+.++.||.|.+.|.+|+.++ .++|.
T Consensus        62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vi-l~~pR  107 (109)
T COG1742          62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVI-LFGPR  107 (109)
T ss_pred             HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeee-EeCCC
Confidence            45677888888888889999999999999999999995544 55554

>PRK02237 hypothetical protein; Provisional

Probab=82.46  E-value=1.5  Score=35.77  Aligned_cols=46  Identities=20%  Similarity=0.387  Sum_probs=38.1

Q ss_pred             ccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeecCC
Q 021439           80 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPL  126 (312)
Q Consensus        80 ~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~p~  126 (312)
                      +--|.+-++.+.+-.+..-|+|.++.|++|.++|.+|+.++ +++|.
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI-~~~pR  108 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI-MYAPR  108 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh-eecCC
Confidence            34567778888888999999999999999999999998765 35553

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=80.71  E-value=1.9  Score=35.07  Aligned_cols=45  Identities=24%  Similarity=0.527  Sum_probs=37.7

Q ss_pred             ccchhHHHHHHHHHHHHHhccccccchhhhHHHHhhhheeEEeecC
Q 021439           80 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP  125 (312)
Q Consensus        80 ~PLgal~lv~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~p  125 (312)
                      +--|.+-++.+.+-.+..-|++.++.|++|..+|.+|+.++ +++|
T Consensus        61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI-~~~P  105 (107)
T PF02694_consen   61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII-LFAP  105 (107)
T ss_pred             HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe-EecC
Confidence            34567778888888999999999999999999999998776 4444

; GO: 0016020 membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	312
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.71
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.57

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.71  E-value=5.8e-08  Score=78.01  Aligned_cols=99  Identities=13%  Similarity=0.076  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHhhhhcCCCCCCCCCcccccchhHHHHHHHHHHHHHHHHHHHhhcccchhccc-hhHHHH
Q 021439           10 ILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPL-GALSII   88 (312)
Q Consensus        10 ~LAl~ss~~ia~G~vlqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~fap~slV~PL-gal~lv   88 (312)
                      .+-+.+.++...|....|++.   +            ..+.+.++.+.+.+.++..+...|+...|++.+.|+ .+++.+
T Consensus         5 l~l~~a~~~e~~~~~~lK~s~---~------------~~~~~~~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v   69 (110)
T 3b5d_A            5 IYLGGAILAEVIGTTLMKFSE---G------------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIV   69 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhcc---C------------cchHHHHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHH
Confidence            445667788889999988851   0            112355667777888999988899999999999999 899999


Q ss_pred             HHHHHHHHHhccccccchhhhHHHHhhhheeEEee
Q 021439           89 VSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLH  123 (312)
Q Consensus        89 ~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~  123 (312)
                      ++++++.+++||+++..+++|+.+++.|++++-..
T Consensus        70 ~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           70 LISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999998876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.57  E-value=5.9e-08  Score=81.18  Aligned_cols=100  Identities=13%  Similarity=0.079  Sum_probs=67.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHhhhhcCCCCCCCCCcccccchhHHHHHHHHHHHHHHHHHHHhhcccchhccc-hhHHHH
Q 021439           10 ILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPL-GALSII   88 (312)
Q Consensus        10 ~LAl~ss~~ia~G~vlqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~fap~slV~PL-gal~lv   88 (312)
                      ++-+++.++.+.|..+.|++.   .            ..+.+.++.|++.++++..+...++...|++.+.|+ .+++.+
T Consensus         5 l~Ll~ail~ev~~~~~lK~s~---g------------~~~~~~~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv   69 (137)
T 2i68_A            5 IYLGGAILAEVIGTTLMKFSE---G------------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIV   69 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC---------------------------CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhc---c------------cchHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Confidence            345567788889999988862   1            112355678888899999999999999999999999 999999


Q ss_pred             HHHHHHHHHhccccccchhhhHHHHhhhheeEEeec
Q 021439           89 VSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHA  124 (312)
Q Consensus        89 ~~~~la~~~l~e~l~~~~~~G~~l~~~G~~lvv~~~  124 (312)
                      ++++++.+++||+++..+++|++++++|++++-..+
T Consensus        70 ~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           70 LISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999999999999999988765433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00