Citrus Sinensis ID: 021462

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310--
Protein Sequence
MARLVRPLMQWPKLRQQCCHRAPLNYFFSSFLRRTPIATEETTSLSFSATSAPSSHGNVHNRLRALKPRNAPPLNSHEDDSATDSDSDDKKSRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVGDHATLQALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLINKDISITNEVYSVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLTRFLLTLAKGMSVHTI
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccEHccHHccccHcccccccccHHHHHHccccccccccccEEEEEcccccccccccccccccHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHcccccHccHHHHHHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHcccccccccccHHcccccccccHccccccccccHHHHHHHHHHHcccccccccEccEEEEEccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
marlvrplmqwpklrqqcchraplnyffssflrrtpiateettslsfsatsapsshgnvhnrlralkprnapplnsheddsatdsdsddkksrNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRlgpdvkegkRRQFNYIGKLLREVEPELMEGLIQATKVGDHATLQALAAANMQNiqddnnqqskesedekeKEEEEEEEELQEYVNIATRWYdglinkdisitnevysvqsvdfDRQELRKLVREVLSVQERQaiadgnegeqgqvdSKIVHAKKSLTRFLLTLAkgmsvhti
Flexible Loop (DISEMBL)
marlvrplmqwpklrQQCCHRAPLNYFFSSFLRRTPIATEETTSLsfsatsapsshgnvHNRLRALkprnapplnsheddsatdsdsddkksrnqkkrearravrwgmqiAAFSTAQIKRILSVASLDEDVLDAIMLVkrlgpdvkegkrrQFNYIGKLLREVEPELMEGLIQATKVGDHATLQALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLINKDISITNEVYSVQSVDFDRQELRKLVREVLSVQerqaiadgnegeqgqvdsKIVHAKKSLTRFLLtlakgmsvhti
Low Complexity Region (SEG)
MARLVRPLMQWPKLRQQCCHRAPLNYFFSSFLRRTPIateettslsfsatsapssHGNVHNRLRALKPRNAPPLNSHEddsatdsdsddkksrnqkkREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVGDHATLQALaaanmqniqddnnqqskesedekekeeeeeeeelqeYVNIATRWYDGLINKDISITNEVYSVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLTRFLLTLAKGMSVHTI
Disordered region (IsUnstruct)
*****RPLMQWPKLRQQCCHRAPLNYFFSSFLRRTPI*****************************************************************AVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVGDHATLQAL************************************YVNIATRWYDGLINKDISITNEVYSVQSVDFDRQELRKLVREVLSV********************IVHAKKSLTRFLLTLA********
Disordered Region (DISOPRED)
*******LMQWPKLRQQCCHRAPLNYF*************************************************************************RRAVRWGMQIAAFSTAQIKR**SVASLDEDVLDAIMLVK*********KRRQFNYIGKLLREVEPELMEGLIQATKVGDHATLQALAAANMQNIQDDNNQQSKESEDEKEK******EELQEYVNIATRWYDGLINKDISITNEVYSVQSVDFDRQELRKLVREV***************************KKSLTRFLLTLAK*******
Disordered Region (DISEMBL)
MARLVRPLMQWPKLRQQCCHRAPLNYFFSSFLRRTPIATEET*****************HNRLRALKPRNAPP*****************************AVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVGDHATLQALAAANMQNIQ**************************EYVNIATRWYDGLINKDISITNEVYSVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLTRFLLTLAKGMSVHTI
Disordered Region (DISPRO)
**RLVRPLMQWPKLRQQCCHRAPLNYFFSSFLRRTPIATEETTSLSFSATS********************************************KKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVGDHATLQALAAA*****************************ELQEYVNIATRWYDGLINKDISITNEVYSVQSVDFDRQELRKLVREVLSVQERQA*******EQGQVDSKIVHAKKSLTRFLLTLAKG******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MARLVRPLMQWPKLRQQCCHRAPLNYFFSSFLRRTPIATEETTSLSFSATSAPSSHGNVHNRLRALKPRNAPPLNSHEDDSATDSDSDDKKSRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVGDHATLQALAAANxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxATRWYDGLINKDISITNEVYSVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLTRFLLTLAKGMSVHTI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	312	2.2.26 [Sep-21-2011]
A0KQ25	181	UPF0307 protein AHA_3937	yes	no	0.451	0.779	0.256	3e-06
A4SHW3	181	UPF0307 protein ASA_0301	yes	no	0.464	0.801	0.256	3e-06
Q0HEJ5	177	UPF0307 protein Shewmr4_3	yes	no	0.243	0.429	0.353	6e-05
Q5R0H4	171	UPF0307 protein IL0389 OS	yes	no	0.224	0.409	0.36	7e-05
Q0HZF8	177	UPF0307 protein Shewmr7_0	yes	no	0.243	0.429	0.353	8e-05
A0L1D3	177	UPF0307 protein Shewana3_	yes	no	0.243	0.429	0.353	8e-05
Q8EA30	177	UPF0307 protein SO_4079 O	yes	no	0.243	0.429	0.353	9e-05
Q4QLE5	178	UPF0307 protein NTHI1319	yes	no	0.214	0.376	0.421	0.0001
A5UIS4	178	UPF0307 protein CGSHiGG_0	yes	no	0.214	0.376	0.421	0.0001
A5UCV6	178	UPF0307 protein CGSHiEE_0	yes	no	0.214	0.376	0.421	0.0001

>sp|A0KQ25|Y3937_AERHH UPF0307 protein AHA_3937 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=AHA_3937 PE=3 SV=1

 Score = 53.1 bits (126), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 54/195 (27%)

Query: 73  PLNSHEDDSATDSDSDDKKSRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVL 132
           P++ ++DD+  +   D   S++Q KR+A    + G +I + S +++++I     LDE++ 
Sbjct: 7   PMSQYQDDNEWE---DWGPSKSQLKRDAEALQKMGEEIVSLSHSELEKI----PLDEELA 59

Query: 133 DAIMLVKRLGPDVKEGKRRQFNYIGKLL--REVEPELMEGLIQATKV--GDHATLQALAA 188
           +A+ L ++L P   E  RR   +IG+L+  R+VEP     +++A  +    H+T+ A   
Sbjct: 60  EAVELGRKLKPKKDESFRRHLQFIGRLMRSRDVEP-----IVEALSIIKNRHSTVNA--- 111

Query: 189 ANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLINKDISITNEVYSV 248
                                              ++   +W + LIN+  S  NE+ S 
Sbjct: 112 ----------------------------------RLHRLEQWRERLINEGDSALNELMS- 136

Query: 249 QSVDFDRQELRKLVR 263
           Q  + DRQ+LR+L+R
Sbjct: 137 QFHELDRQKLRQLIR 151

Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) (taxid: 380703)

>sp|A4SHW3|Y301_AERS4 UPF0307 protein ASA_0301 OS=Aeromonas salmonicida (strain A449) GN=ASA_0301 PE=3 SV=1

 Score = 53.1 bits (126), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 46/191 (24%)

Query: 73  PLNSHEDDSATDSDSDDKKSRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVL 132
           P++ ++DD+  +   D   S+ Q KR+A    + G +I + S +++++I     LDE++ 
Sbjct: 7   PMSQYQDDNELE---DWGPSKTQLKRDAEVLQKLGAEIVSLSHSELEKI----PLDEELA 59

Query: 133 DAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVGDHATLQALAAANMQ 192
           DA+ L ++L P   E  RR   +IG+L+R  + E +E  +   K   H+T+ A       
Sbjct: 60  DAVELGRKLKPKKDESFRRHLQFIGRLMRSRDIEPIEEALSIIK-NRHSTVNA------- 111

Query: 193 NIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLINKDISITNEVYSVQSVD 252
                                          ++   +W + LI +  S  NE+ S Q  +
Sbjct: 112 ------------------------------RLHRLEQWRERLITEGDSALNELMS-QFHE 140

Query: 253 FDRQELRKLVR 263
            DRQ+LR+L+R
Sbjct: 141 LDRQKLRQLIR 151

Aeromonas salmonicida (strain A449) (taxid: 382245)

>sp|Q0HEJ5|Y3456_SHESM UPF0307 protein Shewmr4_3456 OS=Shewanella sp. (strain MR-4) GN=Shewmr4_3456 PE=3 SV=1

 Score = 48.5 bits (114), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 6/82 (7%)

Query: 86  DSDDKK-SRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPD 144
           DSD++  S+ + KR+   A + GM++ + S  Q+ +I     LDE + D+I    ++ P 
Sbjct: 15  DSDEEYVSKTEDKRDCEAAQKVGMELVSLSKTQLDKI----ELDEHLYDSIQQAHKIKPK 70

Query: 145 VKEGKRRQFNYIGKLLREVEPE 166
             E  RR   YIGKL+R V+ E
Sbjct: 71  T-EAYRRHMQYIGKLMRHVDVE 91

Shewanella sp. (strain MR-4) (taxid: 60480)

>sp|Q5R0H4|Y389_IDILO UPF0307 protein IL0389 OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) GN=IL0389 PE=3 SV=1

 Score = 48.5 bits (114), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 5/75 (6%)

Query: 87  SDDKKSRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVK 146
           SDD  S++QKKRE       G Q+   + +Q+ ++     LD+++ DA++L +++  +  
Sbjct: 12  SDDFVSKSQKKREMAERQELGTQLVNLTDSQLAKM----PLDDELRDAVLLARKIR-NKH 66

Query: 147 EGKRRQFNYIGKLLR 161
           EG RRQ  +IGKL+R
Sbjct: 67  EGYRRQLQFIGKLMR 81

Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) (taxid: 283942)

>sp|Q0HZF8|Y494_SHESR UPF0307 protein Shewmr7_0494 OS=Shewanella sp. (strain MR-7) GN=Shewmr7_0494 PE=3 SV=1

 Score = 48.1 bits (113), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 6/82 (7%)

Query: 86  DSDDKK-SRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPD 144
           DSD++  S+ + KR+   A + GM++ + S  Q+ +I     LDE + D+I    ++ P 
Sbjct: 15  DSDEEYVSKTEDKRDCEAAQKVGMELVSLSKTQLDKI----ELDEHLYDSIQQAHKIKPK 70

Query: 145 VKEGKRRQFNYIGKLLREVEPE 166
             E  RR   YIGKL+R V+ E
Sbjct: 71  T-EAYRRHMQYIGKLMRNVDVE 91

Shewanella sp. (strain MR-7) (taxid: 60481)

>sp|A0L1D3|Y3632_SHESA UPF0307 protein Shewana3_3632 OS=Shewanella sp. (strain ANA-3) GN=Shewana3_3632 PE=3 SV=1

 Score = 48.1 bits (113), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 6/82 (7%)

Query: 86  DSDDKK-SRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPD 144
           DSD++  S+ + KR+   A + GM++ + S  Q+ +I     LDE + D+I    ++ P 
Sbjct: 15  DSDEEYVSKTEDKRDCEAAQKVGMELVSLSKTQLDKI----ELDEHLYDSIQQAHKIKPK 70

Query: 145 VKEGKRRQFNYIGKLLREVEPE 166
             E  RR   YIGKL+R V+ E
Sbjct: 71  T-EAYRRHMQYIGKLMRNVDVE 91

Shewanella sp. (strain ANA-3) (taxid: 94122)

>sp|Q8EA30|Y4079_SHEON UPF0307 protein SO_4079 OS=Shewanella oneidensis (strain MR-1) GN=SO_4079 PE=3 SV=1

 Score = 48.1 bits (113), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 6/82 (7%)

Query: 86  DSDDKK-SRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPD 144
           DS+D+  S+ + KR+   A + GM++ + S  Q+ +I     LDE + D+I    ++ P 
Sbjct: 15  DSNDEYVSKTEDKRDCEAAQKVGMELVSLSKTQLDKI----ELDEHLYDSIQQAHKIKPK 70

Query: 145 VKEGKRRQFNYIGKLLREVEPE 166
             E  RR   YIGKL+R V+ E
Sbjct: 71  T-EAYRRHMQYIGKLMRNVDIE 91

Shewanella oneidensis (strain MR-1) (taxid: 211586)

>sp|Q4QLE5|Y1319_HAEI8 UPF0307 protein NTHI1319 OS=Haemophilus influenzae (strain 86-028NP) GN=NTHI1319 PE=3 SV=1

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 9/76 (11%)

Query: 92  SRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRR 151
           S+++ KR+A    + G +I   + A + +I     LDE +LDAI L +RL    KE +RR
Sbjct: 24  SKSEIKRDAEDLKQLGEKIVNLTKANLAKI----PLDESLLDAIELAQRLQ---KEARRR 76

Query: 152 QFNYIGKLLR--EVEP 165
           Q  YIGKL R  +VEP
Sbjct: 77  QLQYIGKLFRGIDVEP 92

Haemophilus influenzae (strain 86-028NP) (taxid: 281310)

>sp|A5UIS4|Y9420_HAEIG UPF0307 protein CGSHiGG_09420 OS=Haemophilus influenzae (strain PittGG) GN=CGSHiGG_09420 PE=3 SV=1

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 9/76 (11%)

Query: 92  SRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRR 151
           S+++ KR+A    + G +I   + A + +I     LDE +LDAI L +RL    KE +RR
Sbjct: 24  SKSEIKRDAEDLKQLGEKIVNLTKANLAKI----PLDESLLDAIELAQRLQ---KEARRR 76

Query: 152 QFNYIGKLLR--EVEP 165
           Q  YIGKL R  +VEP
Sbjct: 77  QLQYIGKLFRGIDVEP 92

Haemophilus influenzae (strain PittGG) (taxid: 374931)

>sp|A5UCV6|Y6290_HAEIE UPF0307 protein CGSHiEE_06290 OS=Haemophilus influenzae (strain PittEE) GN=CGSHiEE_06290 PE=3 SV=1

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 9/76 (11%)

Query: 92  SRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRR 151
           S+++ KR+A    + G +I   + A + +I     LDE +LDAI L +RL    KE +RR
Sbjct: 24  SKSEIKRDAEDLKQLGEKIVNLTKANLAKI----PLDESLLDAIELAQRLQ---KEARRR 76

Query: 152 QFNYIGKLLR--EVEP 165
           Q  YIGKL R  +VEP
Sbjct: 77  QLQYIGKLFRGIDVEP 92

Haemophilus influenzae (strain PittEE) (taxid: 374930)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
225457945	295	PREDICTED: uncharacterized protein LOC10	0.923	0.976	0.536	3e-75
224083048	300	predicted protein [Populus trichocarpa]	0.929	0.966	0.538	8e-75
297803698	305	hypothetical protein ARALYDRAFT_492444 [	0.942	0.963	0.498	3e-69
255538964	304	conserved hypothetical protein [Ricinus	0.961	0.986	0.503	4e-67
449437196	296	PREDICTED: uncharacterized protein LOC10	0.919	0.969	0.508	6e-67
18416293	306	uncharacterized protein [Arabidopsis tha	0.951	0.970	0.479	4e-60
388507908	296	unknown [Medicago truncatula]	0.910	0.959	0.454	5e-58
242040689	273	hypothetical protein SORBIDRAFT_01g03323	0.817	0.934	0.487	9e-57
226495371	274	LOC100282663 [Zea mays] gi|195624240|gb|	0.807	0.919	0.496	2e-56
5668645	1263	putative protein [Arabidopsis thaliana]	0.756	0.186	0.526	4e-56

>gi|225457945|ref|XP_002274273.1| PREDICTED: uncharacterized protein LOC100248885 [Vitis vinifera] gi|302142678|emb|CBI19881.3| unnamed protein product [Vitis vinifera]

 Score =  288 bits (736), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 163/304 (53%), Positives = 210/304 (69%), Gaps = 16/304 (5%)

Query: 4   LVRPLMQWPKLRQQCCHRAPLNYFFSSFLRRTPIATEETTSLSFSATSAPSSHGNVHNRL 63
           L+RPL QWP+L+  C     L++  SS      + + +  S   S T  PS H N H R 
Sbjct: 5   LIRPLRQWPRLQYHCIFTPTLHHSLSS----PSLFSTKAISHLLSFTKPPSLHSNRHFRS 60

Query: 64  RALKPRNAPPLNSHEDDSATDSDSDDKKSRNQKKREARRAVRWGMQIAAFSTAQIKRILS 123
             L+  N P   SH  ++A + DSD K+SRN++KREARRAVRWGM++AAFST QIKRIL 
Sbjct: 61  YGLRLPNDPA-PSHLQETAGEQDSDAKRSRNERKREARRAVRWGMELAAFSTPQIKRILR 119

Query: 124 VASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVGDHATL 183
           +ASL+ +V DA+MLVKRLGPDV+EGKRRQFNYIG+LLR V+PELM+ LIQA+K GD + L
Sbjct: 120 MASLEREVFDALMLVKRLGPDVREGKRRQFNYIGRLLRGVQPELMDALIQASKDGDQSRL 179

Query: 184 QALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLINKDISITN 243
           QAL+  + + +++D  +     ED +E++EE        Y++IATRW DGLINKDI +TN
Sbjct: 180 QALSGLDTRVVEEDGEEDEANEEDYEEEDEESN-----TYIDIATRWSDGLINKDIDVTN 234

Query: 244 EVYSVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLTRFLLTL 303
           EVYSVQSV+FDRQELRKLVR+V S+Q  QAI    E      D  ++ AKKSL +FL TL
Sbjct: 235 EVYSVQSVEFDRQELRKLVRKVHSIQGHQAIIKEEE------DVALLGAKKSLFQFLYTL 288

Query: 304 AKGM 307
           AK +
Sbjct: 289 AKQL 292

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083048|ref|XP_002306937.1| predicted protein [Populus trichocarpa] gi|222856386|gb|EEE93933.1| predicted protein [Populus trichocarpa]

 Score =  286 bits (732), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 166/308 (53%), Positives = 213/308 (69%), Gaps = 18/308 (5%)

Query: 1   MARLVRPLMQWPKLRQQCCHRAPLNYFFSSFLRRTPIATEETTSLSFSATSAPSSHGNVH 60
           MARL+R   QWP L   C   A LNY  S  L      + + TS   S T   +++ +V 
Sbjct: 1   MARLIR---QWPLLHHHCFSYAALNYLLSESL----TLSTKATSHRVSFTKVAAANRSVP 53

Query: 61  NRLRALKPRNAP-PLNSHEDDSATDSDSDDKKSRNQKKREARRAVRWGMQIAAFSTAQIK 119
            R R  K  N+P P +  +  + +DSDS+  KSRNQKKREARR+VRWGM++A+FS  QIK
Sbjct: 54  FRPRGPKLPNSPTPYDFEQGGNVSDSDSEANKSRNQKKREARRSVRWGMELASFSPPQIK 113

Query: 120 RILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVGD 179
           RI+ VASL++DV DA+MLVKRLGPDV+EGKRRQ+NYIGKLLRE+EPELM+ LI  TK GD
Sbjct: 114 RIIKVASLEKDVFDALMLVKRLGPDVREGKRRQYNYIGKLLREMEPELMDALIHCTKDGD 173

Query: 180 HATLQALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLINKDI 239
            + LQ  +         +     +E+E+ +E+E E EEE   EY+++ATRW+DGLIN+DI
Sbjct: 174 WSRLQGFSGL-------EEKIAGEENEECEEREYESEEEGSHEYIDVATRWFDGLINRDI 226

Query: 240 SITNEVYSVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLTRF 299
            +TNEVYS+++VDFDRQELRKLVR V +VQER+ + + NE E   VD+ I  AKKSLTRF
Sbjct: 227 KVTNEVYSLRNVDFDRQELRKLVRRVHAVQERKGVTEENEQE---VDAAITVAKKSLTRF 283

Query: 300 LLTLAKGM 307
           L  LAK M
Sbjct: 284 LHDLAKQM 291

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297803698|ref|XP_002869733.1| hypothetical protein ARALYDRAFT_492444 [Arabidopsis lyrata subsp. lyrata] gi|297315569|gb|EFH45992.1| hypothetical protein ARALYDRAFT_492444 [Arabidopsis lyrata subsp. lyrata]

 Score =  268 bits (684), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 154/309 (49%), Positives = 205/309 (66%), Gaps = 15/309 (4%)

Query: 1   MARLVRPLMQWPKLRQQCCHRA-PLNYFFSSFLRRTPIATEETTSLSFSATSAPSSHGNV 59
           MA+L+RP+ Q   L  QC H    L + FS  L   P +    T L FS+ S   S    
Sbjct: 1   MAQLIRPIRQ---LSPQCNHHFRNLRHLFSKKLPNPPSSI--PTLLLFSSFSTAKS--PP 53

Query: 60  HNRLRALKPRNAPPLNSHEDDSATD-SDSDDKKSRNQKKREARRAVRWGMQIAAFSTAQI 118
           H R+R   P    P    EDD  +D S+SD  KSRNQ+KR+ARRAV+WGM++A+FS  Q+
Sbjct: 54  HRRIRPAPPEALTPTVIAEDDGDSDGSESDSLKSRNQRKRDARRAVKWGMELASFSGDQV 113

Query: 119 KRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVG 178
           KRIL  ASL E+V DA+ML KRLG DV+EGKRR FNYIGKLLREVEP+LM+ LI ATK G
Sbjct: 114 KRILKAASLGEEVYDALMLAKRLGSDVREGKRRHFNYIGKLLREVEPDLMDTLINATKQG 173

Query: 179 DHATLQALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLINKD 238
           DH TLQ L ++  +++ DD        +D+ E E E+ EE   EY+ +A RW+DGLI+++
Sbjct: 174 DHTTLQTLISS-AKDVADDVG---GSYDDDTETESEDGEEGSDEYIAMAARWFDGLISQN 229

Query: 239 ISITNEVYSVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLTR 298
           + +T EVYS+QSVDFDRQELRKL+R+V  V E++      E +Q +V++ +V A+ SL +
Sbjct: 230 VELTKEVYSLQSVDFDRQELRKLIRKVQLVHEQR--KGTTEEKQKEVEAALVTAENSLKQ 287

Query: 299 FLLTLAKGM 307
           FL ++AK M
Sbjct: 288 FLCSMAKQM 296

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538964|ref|XP_002510547.1| conserved hypothetical protein [Ricinus communis] gi|223551248|gb|EEF52734.1| conserved hypothetical protein [Ricinus communis]

 Score =  261 bits (666), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 159/316 (50%), Positives = 210/316 (66%), Gaps = 16/316 (5%)

Query: 1   MARLVRPLMQWPKLRQQCCHRAPLNYFFSSFLRRTPIATEETTSLSFSATSAP-SSHGNV 59
           MARL+RPL QWP L+  CC R     F         ++T  +T+      + P SS+ +V
Sbjct: 1   MARLIRPLRQWPLLQHHCCSRT--TTFLHLLSPSLLLSTTTSTTYHSLVFNTPRSSNRSV 58

Query: 60  HNRLRALK-PRNAPPLNSHEDDSATDSDSD--DKKSRNQKKREARRAVRWGMQIAAFSTA 116
           H R R L+ P    P +  E  S ++SDSD  +K+SRNQKKREARRAVRWGM++A+FS  
Sbjct: 59  HFRSRGLRLPDATTPSDRKEGGSNSNSDSDSDEKRSRNQKKREARRAVRWGMELASFSGP 118

Query: 117 QIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATK 176
           QIKRIL +ASL+ +V DA++LVKRLGPDV+EGKRRQFNYIGKLLREV+PELM+ LI +TK
Sbjct: 119 QIKRILRMASLEREVYDALILVKRLGPDVREGKRRQFNYIGKLLREVKPELMDALIHSTK 178

Query: 177 VGDHATLQALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLIN 236
            GD + +QA++      I++ +    +   DE+E+          EY ++ATRW DGLIN
Sbjct: 179 DGDWSRVQAVSDLETAIIEEADEDSEETDYDEEEEGS-------CEYADLATRWLDGLIN 231

Query: 237 KDISITNEVYSVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSL 296
           KDI ITNEVY++ S+DFDRQELRKLVR V +VQE + + + N+ E    D+ ++ A K L
Sbjct: 232 KDIQITNEVYAISSIDFDRQELRKLVRRVHAVQEGKNVIEENKQE---ADTAVMAATKPL 288

Query: 297 TRFLLTLAKGMSVHTI 312
            RFL  LAK M   +I
Sbjct: 289 LRFLHALAKQMPTESI 304

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437196|ref|XP_004136378.1| PREDICTED: uncharacterized protein LOC101214378 [Cucumis sativus] gi|449511223|ref|XP_004163897.1| PREDICTED: uncharacterized protein LOC101228495 [Cucumis sativus]

 Score =  260 bits (664), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 158/311 (50%), Positives = 202/311 (64%), Gaps = 24/311 (7%)

Query: 1   MARLVRPLMQWPKLRQQ-CCHRAPLNYFFSSFLRRTPIATEETTSLSFSATSAPSSHGNV 59
           M+ +VR L QWP + Q+ CC  A  ++ FSS     P   +   S   S  +  S+   V
Sbjct: 1   MSHMVRALRQWPSMVQKHCCGCAVHHFLFSS----PPWVAKRIYSRRLSLATVHSARREV 56

Query: 60  HNRLRALKPRNAPPL-NSHEDDSATDSDSDDKKSRNQKKREARRAVRWGMQIAAFSTAQI 118
               + L+   AP L  S E +S  D D D +KSRNQ KREARRAV+WGM +A FST+QI
Sbjct: 57  QYESKGLRLSKAPALAKSQEHESINDDDLDVRKSRNQLKREARRAVQWGMDLATFSTSQI 116

Query: 119 KRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEP--ELMEGLIQATK 176
           KRILSV SL++DV DAIMLVKRLG DV+EGKRRQFNYIGKLLR+ +P  ELM+ LIQ+TK
Sbjct: 117 KRILSVTSLEKDVFDAIMLVKRLGNDVREGKRRQFNYIGKLLRDAQPDTELMDVLIQSTK 176

Query: 177 VGDHATLQALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLIN 236
            GDH  LQ L A             S + E  K   EEEEEEE   +V+IATRW DGLI+
Sbjct: 177 AGDHKILQRLCA-------------SVDDEVSKYVYEEEEEEEEGPHVDIATRWLDGLIS 223

Query: 237 KDISITNEVYSVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSL 296
           K+  IT E+YS+Q+V+FDRQELR+LVR+V  V+ER+A  + N  E   V++ + +A+K L
Sbjct: 224 KNNIITKEIYSLQTVEFDRQELRRLVRKVHMVEERKAAIEENGDE---VNTAVTNARKPL 280

Query: 297 TRFLLTLAKGM 307
            RFL  +AK +
Sbjct: 281 ARFLCRMAKQL 291

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18416293|ref|NP_567696.1| uncharacterized protein [Arabidopsis thaliana] gi|18253021|gb|AAL62437.1| putative protein [Arabidopsis thaliana] gi|21593279|gb|AAM65228.1| unknown [Arabidopsis thaliana] gi|28059651|gb|AAO30079.1| putative protein [Arabidopsis thaliana] gi|332659459|gb|AEE84859.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  237 bits (605), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 201/313 (64%), Gaps = 16/313 (5%)

Query: 1   MARLVRPLMQWPKLRQQCCHRA-PLNYFFSSFLRRTPIATEETTSLS-FSATSAPSSHGN 58
           MA+L+RP+ Q   L  QC H    L Y FS  L   P +       S FS   +P     
Sbjct: 1   MAQLIRPIRQ---LSPQCNHHFRNLRYLFSKKLPNPPSSIPTLLLFSSFSTERSPPRRRI 57

Query: 59  VHNRLRALKPRNAPPLNSHEDDSATDSDSDDKKSRNQKKREARRAVRWGMQIAAFSTAQI 118
                 ALKP     + + ED      +SD  +SRNQ+KR+ARRAV+WGM++A+FS  Q+
Sbjct: 58  RPAPPEALKP---TVIVAEEDGDNDGYESDSLRSRNQRKRDARRAVKWGMELASFSGDQV 114

Query: 119 KRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVG 178
           K+IL  ASL E+V DA+ML KRLG DV+EGKRR FNYIGKLLREVEP+LM+ LI ATK G
Sbjct: 115 KQILKAASLGEEVYDALMLAKRLGSDVREGKRRHFNYIGKLLREVEPDLMDTLINATKQG 174

Query: 179 DHATLQALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLINKD 238
           DH+TLQ L    + + +D  +      +D+ E E E+EEE   EY  +A RW+DGLI+++
Sbjct: 175 DHSTLQTL----ISSAKDVADDVGDSYDDDTETESEDEEEGSDEYTAMAARWFDGLISQN 230

Query: 239 ISITNEVYSVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLTR 298
           + +T EVYS+QSVDFDRQELRKLVR+V  V E++      E +Q +V++ +V A+KSL +
Sbjct: 231 VELTKEVYSLQSVDFDRQELRKLVRKVQLVHEQR--KGTTEEKQKEVEAALVTAEKSLNQ 288

Query: 299 FLLTLAKGMSVHT 311
           FL ++AK   VH+
Sbjct: 289 FLCSMAK--QVHS 299

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507908|gb|AFK42020.1| unknown [Medicago truncatula]

 Score =  230 bits (587), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 22/306 (7%)

Query: 4   LVRPLMQWPKLRQQCCHRAPLNYF-FSSFLRRTPIATEETT-SLSFSATSAPSSHGNVHN 61
           + RPL  WP L     H  P +   FS+      + T     S+   + S  +S G +  
Sbjct: 7   VFRPLRHWPWLLHFHHHHHPTSSTKFSALYHHLLLPTSSPQESIKIRSFSLSASRGKLR- 65

Query: 62  RLRALKPRNAPPLNSHEDDSATDSDSDDKKSRNQKKREARRAVRWGMQIAAFSTAQIKRI 121
             RA  P    P    ED +         KSRNQ KREA+RAV+WGM +++FS  QIKRI
Sbjct: 66  --RADSPLPTAPEEEEEDAAI--------KSRNQLKREAKRAVKWGMDLSSFSPPQIKRI 115

Query: 122 LSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVGDHA 181
           L V SLD+ V +A+MLVKR+GPDV+EG+RRQFNYIGKLLR VEPELM+ LI+ATK  DH 
Sbjct: 116 LRVVSLDQIVFEALMLVKRMGPDVREGRRRQFNYIGKLLRNVEPELMDRLIKATKDSDHK 175

Query: 182 TLQALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLINKDISI 241
            LQAL      + +DD+    +  +++ ++E +  ++      +  TRW+DGLINKDI I
Sbjct: 176 ELQALTGLGPDDPEDDSENLVETEDEKDDEESKPYDD------SQVTRWFDGLINKDIQI 229

Query: 242 TNEVYSVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLTRFLL 301
           TNEVYSVQ V++DRQELRKLVR+V   QE +A    +E E+ +++   + AKK+LTRFL 
Sbjct: 230 TNEVYSVQGVEYDRQELRKLVRKVHFAQETKAT---DEDEEKKIEKAEIRAKKALTRFLR 286

Query: 302 TLAKGM 307
           +L++ +
Sbjct: 287 SLSENI 292

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242040689|ref|XP_002467739.1| hypothetical protein SORBIDRAFT_01g033230 [Sorghum bicolor] gi|241921593|gb|EER94737.1| hypothetical protein SORBIDRAFT_01g033230 [Sorghum bicolor]

 Score =  226 bits (577), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 136/279 (48%), Positives = 177/279 (63%), Gaps = 24/279 (8%)

Query: 31  FLRRTPIATEETTSLSFSATSAPSSHGNVHNRLRALKPRNAP----PLNSHEDDSATDSD 86
            LRR  +  +E   LS  A   P     +    RAL+P   P      +  +D  A    
Sbjct: 10  LLRRPLLFLKEARLLSSLAAPLP----GLRRHPRALRPAGRPLPSDAEDDTDDPDAGAGA 65

Query: 87  SDDKKSRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVK 146
              KKSRN+ KREARRAV+WGM +A+FS  QIKRILS ASL+ +V DA+MLVK+ GPDV+
Sbjct: 66  ESFKKSRNELKREARRAVKWGMDLASFSPPQIKRILSAASLEREVFDALMLVKKFGPDVR 125

Query: 147 EGKRRQFNYIGKLLREVEPELMEGLIQATKVGDHATLQALAAANMQNIQDDNNQQSKESE 206
           EGKRRQFNYIG+LLR  +PELM+ LIQA+K GD + L AL            ++ +   E
Sbjct: 126 EGKRRQFNYIGRLLRNAQPELMDTLIQASKDGDESKLHALL-----------SEGTLLVE 174

Query: 207 DEKEKEEEEEEEELQEYVNIATRWYDGLINKDISITNEVYSVQSVDFDRQELRKLVREVL 266
           +E+ ++  +E+E+ QEY+ IA RW+DGL+ KDIS+TNEVYSV SV+FDRQELRKLV+   
Sbjct: 175 EEEVEDLPDEQEDNQEYIKIADRWFDGLLCKDISVTNEVYSVHSVEFDRQELRKLVKRAH 234

Query: 267 SVQERQAIADGNEGEQGQVDSKIVHAKKSLTRFLLTLAK 305
            VQE     DG +      + K+  AKK+L RFL +LAK
Sbjct: 235 MVQESTHNKDGEDS-----NVKLSGAKKTLMRFLRSLAK 268

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495371|ref|NP_001149043.1| LOC100282663 [Zea mays] gi|195624240|gb|ACG33950.1| kinesin heavy chain isolog [Zea mays] gi|414587790|tpg|DAA38361.1| TPA: kinesin heavy chain isolog [Zea mays]

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/280 (49%), Positives = 177/280 (63%), Gaps = 28/280 (10%)

Query: 32  LRRTPIATEETTSLSFSATSAPSSHGNVHNRLRALKPRNAPPLNSHEDDSATDSDSDD-- 89
           LRR  +  +E   LS  AT  P   G  H R  AL+P    PL S  +D+  D D+ D  
Sbjct: 12  LRRPLLFLKEARLLSTLATPLP---GLRHPR--ALRPTG--PLPSDAEDT-DDPDAGDGA 63

Query: 90  ----KKSRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDV 145
               KKSRN+ KREARRAV+WGM +A FS  QIKRILS ASL+ +V DA+MLVK+ GPDV
Sbjct: 64  AVSFKKSRNELKREARRAVKWGMDLAKFSPPQIKRILSAASLEREVFDALMLVKKFGPDV 123

Query: 146 KEGKRRQFNYIGKLLREVEPELMEGLIQATKVGDHATLQALAAANMQNIQDDNNQQSKES 205
           +EG+RRQFNYIG LLR+ +PELM+ LIQA+K GD   L  L +     ++++  ++    
Sbjct: 124 REGRRRQFNYIGSLLRDAQPELMDTLIQASKDGDERKLYTLLSEGKLLVEEEEEEEEDLP 183

Query: 206 EDEKEKEEEEEEEELQEYVNIATRWYDGLINKDISITNEVYSVQSVDFDRQELRKLVREV 265
           + E+E          QEY+ IA RW+DGL+ KDIS+TNEVYSV SV+FDRQELRKLV+  
Sbjct: 184 DGEEEN---------QEYMKIADRWFDGLLCKDISVTNEVYSVHSVEFDRQELRKLVKRA 234

Query: 266 LSVQERQAIADGNEGEQGQVDSKIVHAKKSLTRFLLTLAK 305
              QE     DG E      ++K+  AKK L RFL +LAK
Sbjct: 235 HMFQESTQNKDGEES-----NAKLSGAKKPLMRFLRSLAK 269

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|5668645|emb|CAB51660.1| putative protein [Arabidopsis thaliana] gi|7269267|emb|CAB79327.1| putative protein [Arabidopsis thaliana]

 Score =  224 bits (571), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/247 (52%), Positives = 176/247 (71%), Gaps = 11/247 (4%)

Query: 65   ALKPRNAPPLNSHEDDSATDSDSDDKKSRNQKKREARRAVRWGMQIAAFSTAQIKRILSV 124
            ALKP     + + ED      +SD  +SRNQ+KR+ARRAV+WGM++A+FS  Q+K+IL  
Sbjct: 1021 ALKP---TVIVAEEDGDNDGYESDSLRSRNQRKRDARRAVKWGMELASFSGDQVKQILKA 1077

Query: 125  ASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVGDHATLQ 184
            ASL E+V DA+ML KRLG DV+EGKRR FNYIGKLLREVEP+LM+ LI ATK GDH+TLQ
Sbjct: 1078 ASLGEEVYDALMLAKRLGSDVREGKRRHFNYIGKLLREVEPDLMDTLINATKQGDHSTLQ 1137

Query: 185  ALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLINKDISITNE 244
             L ++     +D  +      +D+ E E E+EEE   EY  +A RW+DGLI++++ +T E
Sbjct: 1138 TLISS----AKDVADDVGDSYDDDTETESEDEEEGSDEYTAMAARWFDGLISQNVELTKE 1193

Query: 245  VYSVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLTRFLLTLA 304
            VYS+QSVDFDRQELRKLVR+V  V E++      E +Q +V++ +V A+KSL +FL ++A
Sbjct: 1194 VYSLQSVDFDRQELRKLVRKVQLVHEQR--KGTTEEKQKEVEAALVTAEKSLNQFLCSMA 1251

Query: 305  KGMSVHT 311
            K   VH+
Sbjct: 1252 K--QVHS 1256

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
TAIR|locus:505006519	306	AT4G24175 "AT4G24175" [Arabido	0.948	0.967	0.410	6.5e-51
UNIPROTKB|Q8EA30	177	SO_4079 "UPF0307 protein SO_40	0.205	0.361	0.347	0.00042
TIGR_CMR|SO_4079	177	SO_4079 "conserved hypothetica	0.205	0.361	0.347	0.00042

TAIR|locus:505006519 AT4G24175 "AT4G24175" [Arabidopsis thaliana (taxid:3702)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 129/314 (41%), Positives = 169/314 (53%)

Query:     1 MARLVRPLMQWPKLRQQCCHR-APLNYFFSSFLRRTPIXXXXXXXXXXXXXXXXXXHGNV 59
             MA+L+RP+ Q   L  QC H    L Y FS  L   P                       
Sbjct:     1 MAQLIRPIRQ---LSPQCNHHFRNLRYLFSKKLPNPP----SSIPTLLLFSSFSTERSPP 53

Query:    60 HNRLRALKPRNAPP--LNSHEXXXXXXXXXXXXXXXXXXXREARRAVRWGMQIAAFSTAQ 117
               R+R   P    P  + + E                   R+ARRAV+WGM++A+FS  Q
Sbjct:    54 RRRIRPAPPEALKPTVIVAEEDGDNDGYESDSLRSRNQRKRDARRAVKWGMELASFSGDQ 113

Query:   118 IKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKV 177
             +K+IL  ASL E+V DA+ML KRLG DV+EGKRR FNYIGKLLREVEP+LM+ LI ATK 
Sbjct:   114 VKQILKAASLGEEVYDALMLAKRLGSDVREGKRRHFNYIGKLLREVEPDLMDTLINATKQ 173

Query:   178 GDHATLQALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVNIATRWYDGLINK 237
             GDH+TLQ L                                    Y  +A RW+DGLI++
Sbjct:   174 GDHSTLQTLISSAKDVADDVGDSYDDDTETESEDEEEGSDE----YTAMAARWFDGLISQ 229

Query:   238 DISITNEVYSVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLT 297
             ++ +T EVYS+QSVDFDRQELRKLVR+V  V E++      E +Q +V++ +V A+KSL 
Sbjct:   230 NVELTKEVYSLQSVDFDRQELRKLVRKVQLVHEQRK--GTTEEKQKEVEAALVTAEKSLN 287

Query:   298 RFLLTLAKGMSVHT 311
             +FL ++AK   VH+
Sbjct:   288 QFLCSMAK--QVHS 299

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8EA30 SO_4079 "UPF0307 protein SO_4079" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 98 (39.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
 Identities = 24/69 (34%), Positives = 37/69 (53%)

Query:    98 REARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIG 157
             R+   A + GM++ + S  Q+ +I     LDE + D+I    ++ P   E  RR   YIG
Sbjct:    28 RDCEAAQKVGMELVSLSKTQLDKI----ELDEHLYDSIQQAHKIKPKT-EAYRRHMQYIG 82

Query:   158 KLLREVEPE 166
             KL+R V+ E
Sbjct:    83 KLMRNVDIE 91

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SO_4079 SO_4079 "conserved hypothetical protein" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 98 (39.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
 Identities = 24/69 (34%), Positives = 37/69 (53%)

Query:    98 REARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIG 157
             R+   A + GM++ + S  Q+ +I     LDE + D+I    ++ P   E  RR   YIG
Sbjct:    28 RDCEAAQKVGMELVSLSKTQLDKI----ELDEHLYDSIQQAHKIKPKT-EAYRRHMQYIG 82

Query:   158 KLLREVEPE 166
             KL+R V+ E
Sbjct:    83 KLMRNVDIE 91

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00014405001 SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (295 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	312
pfam04751	153	pfam04751, DUF615, Protein of unknown function (DU	1e-24
PRK05255	171	PRK05255, PRK05255, hypothetical protein; Provisio	2e-16
COG3028	187	COG3028, COG3028, Uncharacterized protein conserve	4e-09

>gnl|CDD|218242 pfam04751, DUF615, Protein of unknown function (DUF615)

 Score = 96.8 bits (242), Expect = 1e-24
 Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 45/173 (26%)

Query: 91  KSRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKR 150
            S++Q KREA      G ++   S  Q+ ++     LDE++ DAI   +R+     E +R
Sbjct: 2   VSKSQLKREAEALQDLGEELVELSKDQLAKL----PLDEELRDAIAEARRI--TKHEARR 55

Query: 151 RQFNYIGKLLREVEPELMEGLIQATKVGDHATLQALAAANMQNIQDDNNQQSKESEDEKE 210
           RQ  YIGKL+RE + E +                AL       +++ + Q+         
Sbjct: 56  RQLQYIGKLMREEDIEAIR--------------AALDK-----LKNKSEQE--------- 87

Query: 211 KEEEEEEEELQEYVNIATRWYDGLINKDISITNEVYSVQSVDFDRQELRKLVR 263
                        ++   RW D LI    S   E       D DRQ+LR+L+R
Sbjct: 88  ----------TARLHKLERWRDRLIADGDSALEEFLEEYP-DADRQQLRQLIR 129

This family of bacterial proteins has no known function. Length = 153

>gnl|CDD|235377 PRK05255, PRK05255, hypothetical protein; Provisional

 Score = 75.3 bits (186), Expect = 2e-16
 Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 45/189 (23%)

Query: 75  NSHEDDSATDSDSDDKKSRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDA 134
           +    D   + D     S++Q KR+A      G ++   S  Q+ ++     LDED+ DA
Sbjct: 1   DVPMRDPEEEDDEIIWVSKSQIKRDAEALQDLGEELVELSKDQLAKL----PLDEDLRDA 56

Query: 135 IMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVGDHATLQALAAANMQNI 194
           I+  +R+     E +RRQ  YIGKL+R  + E                  AL       +
Sbjct: 57  ILEAQRI--TSHEARRRQLQYIGKLMRNEDVE--------------PIRAALDK-----L 95

Query: 195 QDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLINKDISITNEVYSVQSVDFD 254
           ++ +NQ+                       +   RW D L+ +      E    +  D D
Sbjct: 96  KNKHNQE-------------------TARFHKLERWRDRLLAEGDDALTEF-LEEYPDAD 135

Query: 255 RQELRKLVR 263
           RQ+LR+L+R
Sbjct: 136 RQQLRQLIR 144

Length = 171

>gnl|CDD|225572 COG3028, COG3028, Uncharacterized protein conserved in bacteria [Function unknown]

 Score = 54.7 bits (132), Expect = 4e-09
 Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 11/118 (9%)

Query: 73  PLNSHEDDSATDSDSDDK----KSRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLD 128
           P +  +D    D + +D      S++Q KR+A      G ++   + A + +I     LD
Sbjct: 5   PADWLDDVPGDDEEDEDDEIIWVSKSQIKRDAEALQDLGEELVDLTKAALAKI----PLD 60

Query: 129 EDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVGDHATLQAL 186
           ED+L+AI L +R+  +    +RRQ  YIGKL+R+ + E +   +       H    AL
Sbjct: 61  EDLLEAIELAQRIKSE--IARRRQLQYIGKLMRDRDVEPIRAAL-DKLRNRHNQQVAL 115

Length = 187

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	312
PRK05255	171	hypothetical protein; Provisional	100.0
PF04751	157	DUF615: Protein of unknown function (DUF615); Inte	100.0
COG3028	187	Uncharacterized protein conserved in bacteria [Fun	100.0

>PRK05255 hypothetical protein; Provisional

Probab=100.00  E-value=7.5e-52  Score=365.79  Aligned_cols=159  Identities=29%  Similarity=0.416  Sum_probs=148.3

Q ss_pred             CCCCcCChhHHHHHHHHHHHHHHHHhcCCHHHHHHhcccCCCCHHHHHHHHHHHhcCCCChhhhhhHHHHHHHHHhhcCH
Q 021462           86 DSDDKKSRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEP  165 (312)
Q Consensus        86 d~~~~~SKSq~KREa~~lq~LG~eL~~Ls~~QLkril~~~pL~eeL~dAI~~akRi~~~~~earRRQ~qYIGKLLR~~D~  165 (312)
                      ++..++||||+||+|+++|+||++|++||+.||++|    ||||+|++||.+|++|++  ++|+|||+||||||||..|+
T Consensus        12 ~~~~~~SKSq~KRe~~alq~LG~~L~~Ls~~ql~~l----pL~e~L~~Ai~ea~ri~~--~eA~RRqlqyIGKLmR~~d~   85 (171)
T PRK05255         12 DEIIWVSKSQIKRDAEALQDLGEELVELSKDQLAKL----PLDEDLRDAILEAQRITS--HEARRRQLQYIGKLMRNEDV   85 (171)
T ss_pred             ccccCCChHHHHHHHHHHHHHHHHHHhCCHHHHhcC----CCCHHHHHHHHHHhhhcc--chHHHHHHHHHHHHHhhCCH
Confidence            455678999999999999999999999999999999    999999999999999975  89999999999999999999


Q ss_pred             HHHHHHHHHhhccChhHHHHHHHhhhhhccccccccccchhhHHhhhhHHHHHHHHHHHHHHHHHHHHhhcCCcchHHHH
Q 021462          166 ELMEGLIQATKVGDHATLQALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLINKDISITNEV  245 (312)
Q Consensus       166 E~I~~al~~~k~~~~~~lqa~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~h~lErWRDrLI~~d~~a~~Ev  245 (312)
                      |+|.++|+.+++++..                                      .++.||++|+|||+||++|++++++|
T Consensus        86 e~I~~al~~~~~~~~~--------------------------------------~~~~~h~lE~wRdrLi~~~d~al~e~  127 (171)
T PRK05255         86 EPIRAALDKLKNKHNQ--------------------------------------ETARFHKLERWRDRLLAEGDDALTEF  127 (171)
T ss_pred             HHHHHHHHHHhchhHH--------------------------------------HHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence            9999999999987664                                      38889999999999999999999999


Q ss_pred             HhhcCChhhHHHHHHHHHHHHHHHHHhhhhcCCCCccCCCcccchhhHHHHHHHHHHHh
Q 021462          246 YSVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLTRFLLTLA  304 (312)
Q Consensus       246 ~~~~~p~~DRQeLRqLVR~A~keqe~k~~k~~~ee~~~~~~~k~pkA~R~LFrfLr~l~  304 (312)
                      ++. ||++|||+||||||+|+++++.               +|||+++|+||+||++++
T Consensus       128 ~~~-~P~~DrQ~LRqLiR~A~kE~~~---------------~kppk~~R~LF~~Lr~~~  170 (171)
T PRK05255        128 LEE-YPDADRQQLRQLIRNAKKEKAQ---------------NKPPKSFRELFQYLRELI  170 (171)
T ss_pred             HHH-CchhhHHHHHHHHHHHHHHHHc---------------CCCchhHHHHHHHHHHHh
Confidence            997 6999999999999999998653               478999999999999975

>PF04751 DUF615: Protein of unknown function (DUF615); InterPro: IPR006839 The proteins in this entry are functionally uncharacterised

Probab=100.00  E-value=3e-51  Score=357.11  Aligned_cols=156  Identities=33%  Similarity=0.498  Sum_probs=122.2

Q ss_pred             CCCcCChhHHHHHHHHHHHHHHHHhcCCHHHHHHhcccCCCCHHHHHHHHHHHhcCCCChhhhhhHHHHHHHHHhhcCHH
Q 021462           87 SDDKKSRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPE  166 (312)
Q Consensus        87 ~~~~~SKSq~KREa~~lq~LG~eL~~Ls~~QLkril~~~pL~eeL~dAI~~akRi~~~~~earRRQ~qYIGKLLR~~D~E  166 (312)
                      ++.++||||+||+|+++|+||++|++||+.||++|    |||++|++||++|++|+  +++|+|||+||||||||++|+|
T Consensus         2 e~~~~SKSq~KRe~~~lq~Lg~~L~~L~~~ql~~l----pL~e~l~~Ai~~a~ri~--~~~arrRQ~qyIGKLmR~~d~e   75 (157)
T PF04751_consen    2 EEERPSKSQLKREMHALQDLGEELVELSPKQLAKL----PLPEELRDAIMEARRIT--SHEARRRQLQYIGKLMREEDPE   75 (157)
T ss_dssp             --------------HHHHHHHHHHTTS-HHHHTTS-------HHHHHHHHHGGG----SHHHHHHHHHHHHHHGGGS-HH
T ss_pred             CCCcCChhHHHHHHHHHHHHHHHHHhCCHHHHhhC----CCCHHHHHHHHHHHHHc--ccHHHHHHHHHHHHHHHhCCHH
Confidence            45789999999999999999999999999999999    99999999999999996  4999999999999999999999


Q ss_pred             HHHHHHHHhhccChhHHHHHHHhhhhhccccccccccchhhHHhhhhHHHHHHHHHHHHHHHHHHHHhhcCCcchHHHHH
Q 021462          167 LMEGLIQATKVGDHATLQALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLINKDISITNEVY  246 (312)
Q Consensus       167 ~I~~al~~~k~~~~~~lqa~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~h~lErWRDrLI~~d~~a~~Ev~  246 (312)
                      +|.++|+.+++++..                                      .+..||++|+|||+||++|++++++|+
T Consensus        76 ~I~~al~~~~~~~~~--------------------------------------~~~~~h~lE~wRdrLi~~~~~al~e~~  117 (157)
T PF04751_consen   76 AIRAALDALKNKSQQ--------------------------------------ETARFHRLERWRDRLIADDDSALTEFL  117 (157)
T ss_dssp             HHHHHHHHHHHHHHH--------------------------------------HHHHHHHHHHHHHHHHHS-HHHHHHHH
T ss_pred             HHHHHHHHHHcccHH--------------------------------------HHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence            999999999976443                                      488999999999999999999999999


Q ss_pred             hhcCChhhHHHHHHHHHHHHHHHHHhhhhcCCCCccCCCcccchhhHHHHHHHHHH
Q 021462          247 SVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLTRFLLT  302 (312)
Q Consensus       247 ~~~~p~~DRQeLRqLVR~A~keqe~k~~k~~~ee~~~~~~~k~pkA~R~LFrfLr~  302 (312)
                      +. ||++|+|+||||||+|+++++.               +|||+++|+||+|||+
T Consensus       118 ~~-~p~~D~Q~LRqLiR~a~ke~~~---------------~k~~ka~R~Lfr~Lre  157 (157)
T PF04751_consen  118 AE-YPDADRQQLRQLIRNARKEREA---------------NKPPKAYRELFRYLRE  157 (157)
T ss_dssp             HH-STTS-HHHHHHHHHHHHHHHHT---------------T---HHHHHHHHHHHH
T ss_pred             HH-CChhhHHHHHHHHHHHHHHHHc---------------CCCchhHHHHHHHHhC
Confidence            97 6999999999999999998763               4689999999999986

The entry contains the Escherichia coli (strain K12) protein YjgA (P0A8X0 from SWISSPROT), which has been shown to comigrate with the mature 50S ribosome subunit. Therefore it either represents a novel ribosome-associated protein or it is associated with a different oligomeric complex that comigrates with ribosomal particles [].; PDB: 2P0T_A.

>COG3028 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=100.00  E-value=1.2e-50  Score=358.54  Aligned_cols=171  Identities=27%  Similarity=0.398  Sum_probs=155.4

Q ss_pred             CCCCCCCCCCCCCCCCCCcCChhHHHHHHHHHHHHHHHHhcCCHHHHHHhcccCCCCHHHHHHHHHHHhcCCCChhhhhh
Q 021462           72 PPLNSHEDDSATDSDSDDKKSRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRR  151 (312)
Q Consensus        72 ~p~~~~~~~~~~~~d~~~~~SKSq~KREa~~lq~LG~eL~~Ls~~QLkril~~~pL~eeL~dAI~~akRi~~~~~earRR  151 (312)
                      .|.+.+++    |.++..++||||+||+|.++|+||++|++|++..|++|    ||||.|++||.+|+||++  ++||||
T Consensus        12 ~~~~~~~d----ed~e~iwvSKSqiKRd~~aLq~LGe~L~~L~~~~L~Ki----PL~E~L~~Ai~~aqri~~--~~arrR   81 (187)
T COG3028          12 VPGDDEED----EDDEIIWVSKSQIKRDAEALQDLGEELVDLTKAALAKI----PLDEDLLEAIELAQRIKS--EIARRR   81 (187)
T ss_pred             Cccccccc----cccccccccHHHHHHHHHHHHHHHHHHHhcCHHHHhhC----CCChHHHHHHHHHHHHHH--HHHHHH
Confidence            35555442    23566789999999999999999999999999999999    999999999999999985  779999


Q ss_pred             HHHHHHHHHhhcCHHHHHHHHHHhhccChhHHHHHHHhhhhhccccccccccchhhHHhhhhHHHHHHHHHHHHHHHHHH
Q 021462          152 QFNYIGKLLREVEPELMEGLIQATKVGDHATLQALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWY  231 (312)
Q Consensus       152 Q~qYIGKLLR~~D~E~I~~al~~~k~~~~~~lqa~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~h~lErWR  231 (312)
                      |+||||||||..|+|+|+++|+.+.+.+.+                                      .++.+|.+|+||
T Consensus        82 QlQyIGKlmR~~DvepI~~~Ldkl~~~~~q--------------------------------------~~a~lHklE~~R  123 (187)
T COG3028          82 QLQYIGKLMRDRDVEPIRAALDKLRNRHNQ--------------------------------------QVALLHKLEQLR  123 (187)
T ss_pred             HHHHHHHHHHhCChHHHHHHHHHHhhhHHH--------------------------------------HHHHHHHHHHHH
Confidence            999999999999999999999999987664                                      388999999999


Q ss_pred             HHhhcCCcchHHHHHhhcCChhhHHHHHHHHHHHHHHHHHhhhhcCCCCccCCCcccchhhHHHHHHHHHHHhhh
Q 021462          232 DGLINKDISITNEVYSVQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLTRFLLTLAKG  306 (312)
Q Consensus       232 DrLI~~d~~a~~Ev~~~~~p~~DRQeLRqLVR~A~keqe~k~~k~~~ee~~~~~~~k~pkA~R~LFrfLr~l~~~  306 (312)
                      |+||++||+++++|+.. ||++|||+||+|||||++|++.               +|||+|+|+||+||++++..
T Consensus       124 drLia~GD~Alt~~l~~-~P~aDrq~LR~LvRna~kE~a~---------------NKPPks~ReifQ~lk~l~~~  182 (187)
T COG3028         124 DRLIAEGDGALTEFLNQ-YPDADRQQLRTLIRNAKKEQAQ---------------NKPPKSFREIFQYLKELMEN  182 (187)
T ss_pred             HHHHhcCchHHHHHHHH-CCcccHHHHHHHHHHHHHHHhc---------------CCCcHHHHHHHHHHHHHHHh
Confidence            99999999999999996 7999999999999999998764               57999999999999998754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	312
2p0t_A	176	UPF0307 protein pspto_4464; APC85033, conserved pu	100.0

>2p0t_A UPF0307 protein pspto_4464; APC85033, conserved putative protein, pseudomonas syringae P STR. DC3000, structural genomics, PSI-2; 2.19A {Pseudomonas syringae PV} SCOP: a.290.1.1

Probab=100.00  E-value=6.6e-53  Score=372.67  Aligned_cols=159  Identities=23%  Similarity=0.358  Sum_probs=137.5

Q ss_pred             CCcCChhHHHHHHHHHHHHHHHHhcCCHHHHHHhcccCCCCHHHHHHHHHHHhcCCCChhhhhhHHHHHHHHHhhcCHHH
Q 021462           88 DDKKSRNQKKREARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPEL  167 (312)
Q Consensus        88 ~~~~SKSq~KREa~~lq~LG~eL~~Ls~~QLkril~~~pL~eeL~dAI~~akRi~~~~~earRRQ~qYIGKLLR~~D~E~  167 (312)
                      ++++|||++||+|+++|+||++|++||++||++|    ||||+|++||++|++|++  ++|+|||+||||||||++|+|+
T Consensus        13 ~~~~SKSq~KRe~~~lq~LG~eL~~Ls~~ql~kl----pL~e~L~~Ai~~a~ri~~--~earRRQlqyIGKLmR~~D~e~   86 (176)
T 2p0t_A           13 DGEKSKTQVKRELHALVDLGERLTTLKADVLAKL----PLTDALRKALAEAPKHTA--NIARKRHILFIGKLMRDQDQEA   86 (176)
T ss_dssp             ------------CHHHHHHHHHHTTSCHHHHTTS----CCCHHHHHHHHHGGGCCS--HHHHHHHHHHHHHHGGGSCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHhcC----CCCHHHHHHHHHHhhccc--cHHHHHHHHHHHHHHhcCCHHH
Confidence            3567999999999999999999999999999999    999999999999999985  8899999999999999999999


Q ss_pred             HHHHHHHhhccChhHHHHHHHhhhhhccccccccccchhhHHhhhhHHHHHHHHHHHHHHHHHHHHhhcCCcchHHHHHh
Q 021462          168 MEGLIQATKVGDHATLQALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLINKDISITNEVYS  247 (312)
Q Consensus       168 I~~al~~~k~~~~~~lqa~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~h~lErWRDrLI~~d~~a~~Ev~~  247 (312)
                      |+++|+.+++++..                                      .++.||++|+|||+||++|++++++|++
T Consensus        87 I~~al~~~~~~~~~--------------------------------------~~~~~h~lE~wRdrLi~~gd~al~e~~~  128 (176)
T 2p0t_A           87 ILVLLDQLDASTRQ--------------------------------------YNERFHNLERWRDRLIAGDDADLEKFVI  128 (176)
T ss_dssp             HHHHHHHHHHHHHH--------------------------------------HHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred             HHHHHHHhhcccHH--------------------------------------HHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            99999999987553                                      4899999999999999999999999999


Q ss_pred             hcCChhhHHHHHHHHHHHHHHHHHhhhhcCCCCccCCCcccchhhHHHHHHHHHHHhhh
Q 021462          248 VQSVDFDRQELRKLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLTRFLLTLAKG  306 (312)
Q Consensus       248 ~~~p~~DRQeLRqLVR~A~keqe~k~~k~~~ee~~~~~~~k~pkA~R~LFrfLr~l~~~  306 (312)
                      . ||++|||+||||||+|+++++.               +|||+++|+||+||+++++.
T Consensus       129 ~-~P~~DrQ~LRqLiR~A~kE~~~---------------~kppka~ReLFqyLr~~~~~  171 (176)
T 2p0t_A          129 E-YPDADRQQLRSLIRQAQHEVAR---------------NKPPATSRKIFKYIRELDEL  171 (176)
T ss_dssp             H-STTSCHHHHHHHHHHHHHHHHT---------------TCCCHHHHHHHHHHHHHHTC
T ss_pred             H-CchhhHHHHHHHHHHHHHHHHc---------------CCCcHHHHHHHHHHHHHHhh
Confidence            6 6999999999999999998753               46899999999999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	312
d2p0ta1	148	a.290.1.1 (A:22-169) Uncharacterized protein PSPTO	9e-15

>d2p0ta1 a.290.1.1 (A:22-169) Uncharacterized protein PSPTO4464 {Pseudomonas syringae pv. tomato [TaxId: 323]} Length = 148

class: All alpha proteins
fold: PSPTO4464-like
superfamily: PSPTO4464-like
family: PSPTO4464-like
domain: Uncharacterized protein PSPTO4464
species: Pseudomonas syringae pv. tomato [TaxId: 323]

 Score = 68.2 bits (167), Expect = 9e-15
 Identities = 26/165 (15%), Positives = 50/165 (30%), Gaps = 45/165 (27%)

Query: 107 GMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPE 166
           G ++       + ++     L + +  A+    +        ++R   +IGKL+R+ + E
Sbjct: 8   GERLTTLKADVLAKL----PLTDALRKALAEAPKHTA--NIARKRHILFIGKLMRDQDQE 61

Query: 167 LMEGLIQATKVGDHATLQALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNI 226
            +  L+           +                                          
Sbjct: 62  AILVLLDQLDASTRQYNERFHNL------------------------------------- 84

Query: 227 ATRWYDGLINKDISITNEVYSVQSVDFDRQELRKLVREVLSVQER 271
             RW D LI  D +   +    +  D DRQ+LR L+R+      R
Sbjct: 85  -ERWRDRLIAGDDADLEKFVI-EYPDADRQQLRSLIRQAQHEVAR 127

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	312
d2p0ta1	148	Uncharacterized protein PSPTO4464 {Pseudomonas syr	100.0

>d2p0ta1 a.290.1.1 (A:22-169) Uncharacterized protein PSPTO4464 {Pseudomonas syringae pv. tomato [TaxId: 323]}

class: All alpha proteins
fold: PSPTO4464-like
superfamily: PSPTO4464-like
family: PSPTO4464-like
domain: Uncharacterized protein PSPTO4464
species: Pseudomonas syringae pv. tomato [TaxId: 323]

Probab=100.00  E-value=7.5e-47  Score=323.23  Aligned_cols=147  Identities=20%  Similarity=0.326  Sum_probs=136.9

Q ss_pred             HHHHHHHHHHHhcCCHHHHHHhcccCCCCHHHHHHHHHHHhcCCCChhhhhhHHHHHHHHHhhcCHHHHHHHHHHhhccC
Q 021462          100 ARRAVRWGMQIAAFSTAQIKRILSVASLDEDVLDAIMLVKRLGPDVKEGKRRQFNYIGKLLREVEPELMEGLIQATKVGD  179 (312)
Q Consensus       100 a~~lq~LG~eL~~Ls~~QLkril~~~pL~eeL~dAI~~akRi~~~~~earRRQ~qYIGKLLR~~D~E~I~~al~~~k~~~  179 (312)
                      |+++|+||++|++||++||++|    |||++|++||.++++|++  |+|+|||+||||||||+.|+++|.++|+.+++++
T Consensus         1 M~aLq~LG~~L~~L~~~ql~~l----pl~e~L~~AI~~~~ri~~--~~A~rRQ~q~IGKLmR~~D~e~i~~~l~~~~~~~   74 (148)
T d2p0ta1           1 LHALVDLGERLTTLKADVLAKL----PLTDALRKALAEAPKHTA--NIARKRHILFIGKLMRDQDQEAILVLLDQLDAST   74 (148)
T ss_dssp             CHHHHHHHHHHTTSCHHHHTTS----CCCHHHHHHHHHGGGCCS--HHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHhCCHHHHhcC----CCCHHHHHHHHHHHhhcc--chHHHHHHHHHHHHHhhcCHHHHHHHHHHHHccc
Confidence            7899999999999999999999    999999999999999985  8999999999999999999999999999999765


Q ss_pred             hhHHHHHHHhhhhhccccccccccchhhHHhhhhHHHHHHHHHHHHHHHHHHHHhhcCCcchHHHHHhhcCChhhHHHHH
Q 021462          180 HATLQALAAANMQNIQDDNNQQSKESEDEKEKEEEEEEEELQEYVNIATRWYDGLINKDISITNEVYSVQSVDFDRQELR  259 (312)
Q Consensus       180 ~~~lqa~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~h~lErWRDrLI~~d~~a~~Ev~~~~~p~~DRQeLR  259 (312)
                      ..                                      .+..||.+|+|||+||++|++++++|+.. ||++|||+||
T Consensus        75 ~~--------------------------------------~~~~~h~lE~wRdrLi~~~~~al~e~~~~-~P~~DrQ~LR  115 (148)
T d2p0ta1          75 RQ--------------------------------------YNERFHNLERWRDRLIAGDDADLEKFVIE-YPDADRQQLR  115 (148)
T ss_dssp             HH--------------------------------------HHHHHHHHHHHHHHHHHSCHHHHHHHHHH-STTSCHHHHH
T ss_pred             HH--------------------------------------HHHHHHHHHHHHHHHHHCCHHHHHHHHHH-CcchHHHHHH
Confidence            53                                      37889999999999999999999999996 6999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCCCCccCCCcccchhhHHHHHHHHHHHhhh
Q 021462          260 KLVREVLSVQERQAIADGNEGEQGQVDSKIVHAKKSLTRFLLTLAKG  306 (312)
Q Consensus       260 qLVR~A~keqe~k~~k~~~ee~~~~~~~k~pkA~R~LFrfLr~l~~~  306 (312)
                      ||||+|+++++.               +|||+++|+||+||+++++.
T Consensus       116 qLiR~A~kE~~~---------------~k~~k~~R~LF~~Lrel~e~  147 (148)
T d2p0ta1         116 SLIRQAQHEVAR---------------NKPPATSRKIFKYIRELDEL  147 (148)
T ss_dssp             HHHHHHHHHHHT---------------TCCCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHc---------------CCCchHHHHHHHHHHHHHhc
Confidence            999999987653               46899999999999999864