Citrus Sinensis ID: 021547

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-
Protein Sequence
MENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEcccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccccccccEEEcccHHHHHHHHHHHHccccccEEEEcccccccHHHHHHHcccEEEEEEccccccccccHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEcccccccccccccccccccccccccEEEEcccccccccccccccEEcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccHcHEEEccHHHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHcccEEEEEEEEHHHccEEcHHHHHHHccccEEEEEEEcccccccccccHHHHHHHHHHHHHHcccEEEEccccccEcccccEEEEEEccccccEEEEEcccHHHHccccEEEEEccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
meneaekkWGFEVKQELNREREAEVAAFRYAIVSLMEsvdkndprpviplghgdpaafpcfrtaAVAEDAIVDSVRssmfncyapmfglPLARRAVAEYLNrdlpyklsaddiYITLGCMEAVEIILTVITRLGaanillprpgwpfyesfakrnhievrhfdllpergweVDLEAVEALADENTAAIVIinpcnpcgnvltYQHLQKIAETARKLGILVIADEvyghlafgstpyipmgvfgsIVPVITlgsiskrwivpgwrfgwlatndpngvlqksgiVGSIKaclgvrsgpstLIQVCEMFLLVNK
Flexible Loop (DISEMBL)
meneaekkwgfevkqelnREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK
Low Complexity Region (SEG)
MENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK
Disordered region (IsUnstruct)
**********************AEVAAFRYAIVSLMESV******PVIPLGHGDPAAFPCFRTAAV*************FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES*****************RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV**
Disordered Region (DISOPRED)
*****************************YAIVS**********RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN*
Disordered Region (DISEMBL)
********WGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK
Disordered Region (DISPRO)
*******KWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	311	2.2.26 [Sep-21-2011]
Q9FN30	414	Probable aminotransferase	yes	no	0.855	0.642	0.614	1e-96
Q9LVY1	420	Tyrosine aminotransferase	no	no	0.954	0.707	0.534	4e-93
Q9ST02	461	Nicotianamine aminotransf	N/A	no	0.881	0.594	0.574	5e-92
Q9ST03	551	Nicotianamine aminotransf	N/A	no	0.909	0.513	0.555	3e-90
Q9SIV0	462	S-alkyl-thiohydroximate l	no	no	0.909	0.612	0.531	3e-89
Q67Y55	449	Probable aminotransferase	no	no	0.897	0.621	0.517	1e-86
Q9SK47	445	Probable aminotransferase	no	no	0.900	0.629	0.510	4e-78
Q8VYP2	424	Probable aminotransferase	no	no	0.932	0.683	0.451	5e-70
Q9SUR6	422	Cystine lyase CORI3 OS=Ar	no	no	0.800	0.590	0.470	2e-64
Q54K95	417	Tyrosine aminotransferase	yes	no	0.926	0.690	0.356	2e-52

>sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2 OS=Arabidopsis thaliana GN=At5g53970 PE=2 SV=1

 Score =  352 bits (904), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 166/270 (61%), Positives = 206/270 (76%), Gaps = 4/270 (1%)

Query: 35  LMESVDKNDP---RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPL 91
           LMES+   +    + VI LG GDP  + CFRT  V+  A+ DS+ S+ F+ Y+P  GLP 
Sbjct: 20  LMESITTEEDEGGKRVISLGMGDPTLYSCFRTTQVSLQAVSDSLLSNKFHGYSPTVGLPQ 79

Query: 92  ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF 151
           ARRA+AEYL+RDLPYKLS DD++IT GC +A+++ L+++ R   ANILLPRPG+P YE  
Sbjct: 80  ARRAIAEYLSRDLPYKLSQDDVFITSGCTQAIDVALSMLAR-PRANILLPRPGFPIYELC 138

Query: 152 AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
           AK  H+EVR+ DLLPE GWE+DL+AVEALADENT A+V+INP NPCGNV +YQHL KIAE
Sbjct: 139 AKFRHLEVRYVDLLPENGWEIDLDAVEALADENTVALVVINPGNPCGNVYSYQHLMKIAE 198

Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271
           +A+KLG LVIADEVYGHLAFGS P++PMGVFGSIVPV+TLGS+SKRWIVPGWR GW  T 
Sbjct: 199 SAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTT 258

Query: 272 DPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
           DP+G  +   I+   K    +  GP+T IQ
Sbjct: 259 DPSGSFKDPKIIERFKKYFDILGGPATFIQ 288

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: -

>sp|Q9LVY1|TAT_ARATH Tyrosine aminotransferase OS=Arabidopsis thaliana GN=TAT PE=2 SV=1

 Score =  341 bits (874), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 161/301 (53%), Positives = 215/301 (71%), Gaps = 4/301 (1%)

Query: 1   MENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPC 60
           M     K+W F   + + R     +   R  + +L+  +D  D RPVIPLGHGDP+ FP 
Sbjct: 1   MGENGAKRWNFGANEVVERSNSLTI---RDYLNTLINCLDGGDVRPVIPLGHGDPSPFPS 57

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120
           FRT   A +AI D+VRS+ FN Y+   G+P+AR+AVAEYL+ DL Y++S +D++IT GC+
Sbjct: 58  FRTDQAAVEAICDAVRSTKFNNYSSSSGVPVARKAVAEYLSSDLSYQISPNDVHITAGCV 117

Query: 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL 180
           +A+EI+++ +   GA NILLPRP +P Y+S A    +EVR+FDLLPE GW+VDL+ VEAL
Sbjct: 118 QAIEILISALAIPGA-NILLPRPTYPMYDSRAAFCQLEVRYFDLLPENGWDVDLDGVEAL 176

Query: 181 ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240
           AD+ T AI++INPCNPCGNV + QHLQKIAETA KLGILVIADEVY H AFG  P++ M 
Sbjct: 177 ADDKTVAILVINPCNPCGNVFSRQHLQKIAETACKLGILVIADEVYDHFAFGDKPFVSMA 236

Query: 241 VFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLI 300
            F  +VPVI LG+ISKRW VPGWR GW+ T DP+G+++ SG V ++   + + + P+T I
Sbjct: 237 EFAELVPVIVLGAISKRWFVPGWRLGWMVTLDPHGIMKDSGFVQTLINVVNMSTDPATFI 296

Query: 301 Q 301
           Q
Sbjct: 297 Q 297

Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. Can catalyze the reverse reaction, using L-glutamate in vitro. Can convert phenylalanine to phenylpyruvate and catalyze the reverse reaction in vitro.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9ST02|NAATA_HORVU Nicotianamine aminotransferase A OS=Hordeum vulgare GN=naat-A PE=1 SV=2

 Score =  337 bits (865), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 159/277 (57%), Positives = 213/277 (76%), Gaps = 3/277 (1%)

Query: 25  VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA 84
           + A RY I +   SV+++ PRPV+PL HGDP+ FP FRTA  AEDA+  ++R+  FNCYA
Sbjct: 61  IRAIRYKISA---SVEESGPRPVLPLAHGDPSVFPAFRTAVEAEDAVAAALRTGQFNCYA 117

Query: 85  PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPG 144
              GLP AR AVAE+L++ +PYKLSADD+++T G  +A+E+I+ V+ +   ANILLPRPG
Sbjct: 118 AGVGLPAARSAVAEHLSQGVPYKLSADDVFLTAGGTQAIEVIIPVLAQTAGANILLPRPG 177

Query: 145 WPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204
           +P YE+ A  N +EVRHFDL+P++GWE+D++++E++AD+NT A+VIINP NPCG+V +Y 
Sbjct: 178 YPNYEARAAFNKLEVRHFDLIPDKGWEIDIDSLESIADKNTTAMVIINPNNPCGSVYSYD 237

Query: 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR 264
           HL K+AE ARKLGILVIADEVYG L  GS P+IPMGVFG I PV+++GS+SK WIVPGWR
Sbjct: 238 HLAKVAEVARKLGILVIADEVYGKLVLGSAPFIPMGVFGHIAPVLSIGSLSKSWIVPGWR 297

Query: 265 FGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
            GW+A  DP  +L+K+ I  SI   L V + P+T +Q
Sbjct: 298 LGWVAVYDPTKILEKTKISTSITNYLNVSTDPATFVQ 334

Involved in biosynthesis of mugineic acid family phytosiderophores.

Hordeum vulgare (taxid: 4513)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 0

>sp|Q9ST03|NAATB_HORVU Nicotianamine aminotransferase B OS=Hordeum vulgare GN=naat-B PE=1 SV=2

 Score =  332 bits (850), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 159/286 (55%), Positives = 212/286 (74%), Gaps = 3/286 (1%)

Query: 25  VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA 84
           + A RY I +   SV +  PRPV+PL HGDP+ FP FRTA  AEDA+  +VR+  FNCY 
Sbjct: 151 IRAIRYKISA---SVQEKGPRPVLPLAHGDPSVFPAFRTAVEAEDAVAAAVRTGQFNCYP 207

Query: 85  PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPG 144
              GLP AR AVAE+L++ +PY LSADD+++T G  +A+E+I+ V+ +   ANILLPRPG
Sbjct: 208 AGVGLPAARSAVAEHLSQGVPYMLSADDVFLTAGGTQAIEVIIPVLAQTAGANILLPRPG 267

Query: 145 WPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204
           +P YE+ A  N +EVRHFDL+P++GWE+D++++E++AD+NT A+VIINP NPCG+V +Y 
Sbjct: 268 YPNYEARAAFNRLEVRHFDLIPDKGWEIDIDSLESIADKNTTAMVIINPNNPCGSVYSYD 327

Query: 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR 264
           HL K+AE A++LGILVIADEVYG L  GS P+IPMGVFG I PV+++GS+SK WIVPGWR
Sbjct: 328 HLSKVAEVAKRLGILVIADEVYGKLVLGSAPFIPMGVFGHITPVLSIGSLSKSWIVPGWR 387

Query: 265 FGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310
            GW+A  DP  +LQ++ I  SI   L V + P+T IQ     +L N
Sbjct: 388 LGWVAVYDPRKILQETKISTSITNYLNVSTDPATFIQAALPQILEN 433

Involved in biosynthesis of mugineic acid family phytosiderophores.

Hordeum vulgare (taxid: 4513)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 0

>sp|Q9SIV0|SUR1_ARATH S-alkyl-thiohydroximate lyase SUR1 OS=Arabidopsis thaliana GN=SUR1 PE=1 SV=1

 Score =  328 bits (842), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 151/284 (53%), Positives = 205/284 (72%), Gaps = 1/284 (0%)

Query: 18  NREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS 77
           ++  +A     R  I  L ++  K+  + ++PLGHGDP+ +PCFRT   AEDA+VD +RS
Sbjct: 39  DKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS 98

Query: 78  SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAAN 137
              N Y P  G+  ARRAVA+Y+NRDLP+KL+ +DI++T GC + +EI+   + R  A N
Sbjct: 99  GKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNA-N 157

Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC 197
           ILLPRPG+P Y++ A  + +EVR FDLLPE+ WE+DLE +EA+ADENT A+V+INP NPC
Sbjct: 158 ILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPC 217

Query: 198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR 257
           GNV ++ HL+K+AETARKLGI+VI+DEVY    FG  P++ MG F SIVPV+TL  ISK 
Sbjct: 218 GNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKG 277

Query: 258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
           W+VPGW+ GW+A NDP GV + + ++ SIK  L V   P+T+IQ
Sbjct: 278 WVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQ 321

C-S lyase involved in glucosinolate biosynthesis. Converts S-(alkylacetohydroximoyl)-L-cysteine to thiohydroximate. Functions in auxin homeostasis. Probably required for glucosinolate activation in response to pathogens.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q67Y55|TAT1_ARATH Probable aminotransferase TAT1 OS=Arabidopsis thaliana GN=At4g28420 PE=2 SV=1

 Score =  319 bits (818), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 145/280 (51%), Positives = 200/280 (71%), Gaps = 1/280 (0%)

Query: 22  EAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN 81
           +A     R  +  L +    +  +P++PL HGDP+ +PC+RT+ + E+A+VD +RS   N
Sbjct: 37  KASSVTMRVIVYKLFDECSLDVKKPLLPLAHGDPSVYPCYRTSILVENAVVDVLRSGKGN 96

Query: 82  CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLP 141
            Y P  G+  AR+AVA+Y+NRDL  K+  +D++IT+GC + +E++L  + R  A NILLP
Sbjct: 97  SYGPAAGILPARQAVADYVNRDLTNKVKPNDVFITVGCNQGIEVVLQSLARPNA-NILLP 155

Query: 142 RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201
           RP +P YE+ A  + +EVR FDLLPE+ WE+DL  +EA+ADENT A+VIINP NPCGNV 
Sbjct: 156 RPSYPHYEARAVYSGLEVRKFDLLPEKEWEIDLPGIEAMADENTVAMVIINPNNPCGNVY 215

Query: 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP 261
           +Y HL+K+AETA+KLGI+VI DEVY    FG  P++PMG F SI PVITLG ISK WIVP
Sbjct: 216 SYDHLKKVAETAKKLGIMVITDEVYCQTIFGDKPFVPMGEFSSITPVITLGGISKGWIVP 275

Query: 262 GWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
           GWR GW+A NDP G+L+ +G+V SI+  L +    +T++Q
Sbjct: 276 GWRIGWIALNDPRGILKSTGMVQSIQQNLDITPDATTIVQ 315

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SK47|TAT3_ARATH Probable aminotransferase TAT3 OS=Arabidopsis thaliana GN=TAT3 PE=2 SV=1

 Score =  291 bits (745), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 143/280 (51%), Positives = 194/280 (69%)

Query: 22  EAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN 81
           +A     R     + ++   N  + ++    G+P+A   FRT   AE+A+  + RS M N
Sbjct: 26  DAAAVTLRKLAFGMFKNCTMNSGKTILFPTPGEPSAHSNFRTCPEAEEAVAAAARSGMAN 85

Query: 82  CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLP 141
            YAP  G+  ARRAVAEYLN +LP KL A+D+YIT GC +A+EI++  +    +ANILLP
Sbjct: 86  SYAPSPGVFKARRAVAEYLNGELPTKLKAEDVYITGGCNQAIEIVIDSLAGNPSANILLP 145

Query: 142 RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201
           RPG+P Y++ A  + +E+R +DLLPE  WE++L+ +EA ADENT A+VIINP NPCGNV 
Sbjct: 146 RPGYPHYDARAVYSGLEIRKYDLLPESDWEINLDGLEAAADENTVAMVIINPNNPCGNVY 205

Query: 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP 261
           TY HL K+AE ARKLGI++I+DEVY H+ +G  P+IPMG F SI PVITLGSISK W+ P
Sbjct: 206 TYDHLNKVAEMARKLGIMIISDEVYDHVVYGDKPFIPMGKFASIAPVITLGSISKGWVNP 265

Query: 262 GWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
           GWR GW+A NDPNG+   +G+V +I+  L +   PS ++Q
Sbjct: 266 GWRVGWIAMNDPNGIFVSTGVVQAIEDFLDLTPQPSFILQ 305

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q8VYP2|TAT4_ARATH Probable aminotransferase TAT4 OS=Arabidopsis thaliana GN=At4g23590 PE=2 SV=1

 Score =  264 bits (675), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 136/301 (45%), Positives = 191/301 (63%), Gaps = 11/301 (3%)

Query: 1   MENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPC 60
           M ++    W F       +  +A +  +   I SL +   K    P++P    +      
Sbjct: 1   MASQGCVDWQFSGSDAAEKAAQASLGTYSSEIFSLCDPQGK----PILPPLSEEA----- 51

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120
             T+  AE A+V +V     N YAP  GLP+A+RAVAEYLNRDL  KL+ DD+Y+T+GC 
Sbjct: 52  -ETSHTAEKAVVKAVLCGTGNAYAPSIGLPVAKRAVAEYLNRDLDNKLTGDDVYMTVGCK 110

Query: 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL 180
           +A+E+ ++++ +   ANILLPRPG+P+    +   H+EVR ++ +PER +E+D  +V  +
Sbjct: 111 QAIELAVSILAK-PKANILLPRPGFPWDMVHSIYKHLEVRRYEFIPERDFEIDFNSVREM 169

Query: 181 ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240
            DENT AI IINP NP GN  T  HL+++A  AR+LGI+V++DEVY    FGS P++PMG
Sbjct: 170 VDENTFAIFIINPHNPNGNYYTEAHLKQLATLARELGIMVVSDEVYRWSVFGSNPFVPMG 229

Query: 241 VFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLI 300
            F SIVPVITLGSISK WIVPGWR GWLA +D NGV + + ++ + K  L + S P T+I
Sbjct: 230 KFSSIVPVITLGSISKGWIVPGWRTGWLALHDLNGVFRSTKVLKAAKEFLEITSKPPTVI 289

Query: 301 Q 301
           Q
Sbjct: 290 Q 290

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SUR6|CORI3_ARATH Cystine lyase CORI3 OS=Arabidopsis thaliana GN=CORI3 PE=1 SV=1

 Score =  245 bits (626), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 119/253 (47%), Positives = 172/253 (67%), Gaps = 4/253 (1%)

Query: 52  HGDPAAFP---CFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKL 108
           HG P   P      T+  AE A+V +V     N YAP  GL  A+ AVAEYLN+ LP KL
Sbjct: 39  HGKPILPPRNEILETSNTAEKAVVKAVLYGSGNAYAPSLGLAAAKSAVAEYLNQGLPKKL 98

Query: 109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER 168
           +ADD+++TLGC +A+E+ + ++ +   AN+LLP PG+P+    +   ++EVRH++ LPE+
Sbjct: 99  TADDVFMTLGCKQAIELAVDILAK-PKANVLLPSPGFPWDLVRSIYKNLEVRHYNFLPEK 157

Query: 169 GWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH 228
            +E+D ++V AL DENT AI IINP NP GN  +  HL+++AE A++L I+V++DEV+  
Sbjct: 158 NFEIDFDSVRALVDENTFAIFIINPHNPNGNTYSEAHLKQLAELAKELKIMVVSDEVFRW 217

Query: 229 LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA 288
             FGS P++PMG F SIVPV+TLGSISK W VPGWR GWL  +D +GV + + ++ + + 
Sbjct: 218 TLFGSNPFVPMGKFSSIVPVVTLGSISKGWKVPGWRTGWLTLHDLDGVFRNTKVLQAAQD 277

Query: 289 CLGVRSGPSTLIQ 301
            L + + P T+IQ
Sbjct: 278 FLQINNNPPTVIQ 290

Possesses cystine lyase and tyrosine aminotransferase activities in vitro. May be required for the synthesis of homogentisate a precursor of tocopherols and plastoquinones.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q54K95|ATTY_DICDI Tyrosine aminotransferase OS=Dictyostelium discoideum GN=tat PE=3 SV=1

 Score =  206 bits (523), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 109/306 (35%), Positives = 171/306 (55%), Gaps = 18/306 (5%)

Query: 1   MENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRP-----VIPLGHGDP 55
            +N +++KW  E  +  N            A   +   VDK   +P      I L  GDP
Sbjct: 2   QDNVSQRKWNVESSKSANN-----------AFNPIRRIVDKGGFKPNPNKSTISLSIGDP 50

Query: 56  AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI 115
             F        A D ++++++SS FN Y P  G  +AR AVA+Y+      KL++ DI +
Sbjct: 51  CVFGNLNILDYANDLLIENIKSSKFNGYPPSTGYEIAREAVAKYVETPTS-KLTSKDIIV 109

Query: 116 TLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLE 175
             G   A+E+ + V+   G  NIL+P+PG+P YE  +K   I V+H++LL ++G+ VDLE
Sbjct: 110 ASGASGAIELAIGVLLNEGD-NILVPKPGFPLYECTSKTKFINVKHYNLLEKQGFNVDLE 168

Query: 176 AVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP 235
            + +L D+ T AI++ NP NPCG V + QHL  I + AR+  + +IADE+Y  L FG   
Sbjct: 169 HLRSLIDDKTKAILVNNPSNPCGIVYSKQHLLDIIQVAREYCLPIIADEIYSDLTFGEHK 228

Query: 236 YIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSG 295
           + PM      VP++++G I+KR++VPGWR GW+A +D + +     I+  + +   V  G
Sbjct: 229 FYPMASLTDKVPILSIGGIAKRFLVPGWRLGWVAIHDRDNIFSNGRIIEGLISLSQVILG 288

Query: 296 PSTLIQ 301
           P++L+Q
Sbjct: 289 PNSLVQ 294

Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. Has no transaminase activity towards phenylalanine.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	311
225446437	419	PREDICTED: tyrosine aminotransferase [Vi	0.954	0.708	0.661	1e-117
224133454	418	aminotransferase family protein [Populus	0.951	0.708	0.654	1e-116
359485208	419	PREDICTED: LOW QUALITY PROTEIN: tyrosine	0.954	0.708	0.651	1e-114
302143324	360	unnamed protein product [Vitis vinifera]	0.954	0.825	0.651	1e-114
255553657	419	tyrosine aminotransferase, putative [Ric	0.954	0.708	0.644	1e-114
224133458	418	aminotransferase family protein [Populus	0.954	0.710	0.644	1e-111
147811786	365	hypothetical protein VITISV_034866 [Viti	0.926	0.789	0.654	1e-110
224133450	417	aminotransferase family protein [Populus	0.945	0.705	0.640	1e-109
225446435	419	PREDICTED: tyrosine aminotransferase iso	0.954	0.708	0.634	1e-107
302143330	518	unnamed protein product [Vitis vinifera]	0.954	0.573	0.634	1e-106

>gi|225446437|ref|XP_002276551.1| PREDICTED: tyrosine aminotransferase [Vitis vinifera] gi|302143331|emb|CBI21892.3| unnamed protein product [Vitis vinifera]

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 199/301 (66%), Positives = 247/301 (82%), Gaps = 4/301 (1%)

Query: 1   MENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPC 60
           MEN ++K+WGF+  QELN    A     R  +  +M ++ + D RPVIPLGHGDP+AFPC
Sbjct: 1   MENGSKKRWGFQGNQELNM---AAAVTIRGVLGKVMSNLSEEDNRPVIPLGHGDPSAFPC 57

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120
           FRT  VAEDAI D+VRS+ FN YAP  GL  ARRAVAEYL+RDLPY+LS DDIY+T+GC 
Sbjct: 58  FRTTPVAEDAIADAVRSAKFNSYAPTVGLLPARRAVAEYLSRDLPYQLSPDDIYLTIGCT 117

Query: 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL 180
           +A+EI++ V+ R GA NILLPRPG+P+YE+ A  +++EVRHFDLLPE+GWEVDLEAV+AL
Sbjct: 118 QAIEIMIQVLARPGA-NILLPRPGFPYYEARAAADNLEVRHFDLLPEQGWEVDLEAVKAL 176

Query: 181 ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240
           ADENT A+VI+NP NP G+V TY+HL+K+AETAR LGI+VI+DEVYGHLAFGS P++PMG
Sbjct: 177 ADENTVAMVIVNPGNPSGSVFTYEHLKKVAETARNLGIMVISDEVYGHLAFGSKPFVPMG 236

Query: 241 VFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLI 300
           VFGSIVP++T+GSISKRW+VPGWR GWL TND NG+L KSG+V SI +CL + S P+T I
Sbjct: 237 VFGSIVPIVTVGSISKRWVVPGWRLGWLVTNDLNGILHKSGVVESIISCLNISSDPATFI 296

Query: 301 Q 301
           Q
Sbjct: 297 Q 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133454|ref|XP_002328046.1| aminotransferase family protein [Populus trichocarpa] gi|222837455|gb|EEE75834.1| aminotransferase family protein [Populus trichocarpa]

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 197/301 (65%), Positives = 246/301 (81%), Gaps = 5/301 (1%)

Query: 1   MENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPC 60
           MEN   KKWGF+  + L+      V   R  +  L ++++K D R V+PL HGDP+AFPC
Sbjct: 1   MEN-GSKKWGFQANKSLSTSSAVTV---RGVLNVLQDNLNKEDTRQVMPLAHGDPSAFPC 56

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120
           FRT  VA++A+VD+VRS+ +N YAP  GL  ARR+VA++LNRDLPYKLS DD+++TLGC 
Sbjct: 57  FRTTTVADEAVVDAVRSAKYNHYAPTVGLLPARRSVADFLNRDLPYKLSPDDVFLTLGCT 116

Query: 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL 180
           +A+EI +TV+ R GA NILLPRPG+P+YE+ A  +H+E RHFDL+PE+GWEVDL+AVEAL
Sbjct: 117 QAIEITITVLARPGA-NILLPRPGFPYYEARAAHSHLEARHFDLIPEKGWEVDLDAVEAL 175

Query: 181 ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240
           ADENT A+V+INP NPCG+V +YQHLQKIAETARKLGI+VIADEVYGHL FG++P++PMG
Sbjct: 176 ADENTVAMVVINPGNPCGSVYSYQHLQKIAETARKLGIMVIADEVYGHLTFGNSPFVPMG 235

Query: 241 VFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLI 300
           VFGSIVPV+TLGSISKRWIVPGWR GWL T+DPNG+LQ+SG+V SIK CL + S P T I
Sbjct: 236 VFGSIVPVLTLGSISKRWIVPGWRIGWLVTSDPNGILQESGVVESIKGCLNISSDPVTFI 295

Query: 301 Q 301
           Q
Sbjct: 296 Q 296

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485208|ref|XP_003633232.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine aminotransferase-like [Vitis vinifera]

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 196/301 (65%), Positives = 238/301 (79%), Gaps = 4/301 (1%)

Query: 1   MENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPC 60
           MEN   K+WGF+  +EL++   A     R  +  +M +++  D RPVIPLGHGDP+AF C
Sbjct: 1   MENGGRKRWGFQGNEELDK---AASITIRGVLNKVMSNLNPQDHRPVIPLGHGDPSAFSC 57

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120
           FRT  VAEDAIVD++RS  FN YAP  G+  ARRA+AE+L+ DLPYKLS DDI++T+GC 
Sbjct: 58  FRTTPVAEDAIVDALRSRKFNSYAPAVGILPARRAIAEHLSHDLPYKLSPDDIFLTIGCS 117

Query: 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL 180
           +A+E+I+ V+ R GA NILLPRPG+PFYES A  NH+E RHFDLLPE+GWEVDLE V+AL
Sbjct: 118 QAIELIIKVLARPGA-NILLPRPGYPFYESHAAANHLEFRHFDLLPEKGWEVDLEGVKAL 176

Query: 181 ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240
           ADENT A+VIINP NPCGN+ T++HL+K+AETAR LGILVI+DEVY HLAFG  PY+ MG
Sbjct: 177 ADENTVAMVIINPGNPCGNIFTHEHLKKVAETARMLGILVISDEVYAHLAFGGNPYVSMG 236

Query: 241 VFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLI 300
            FGSI PVITLGSISKRWIVPGWR GWL TNDPNG+L KSG+V SI + L + S P+T I
Sbjct: 237 AFGSITPVITLGSISKRWIVPGWRLGWLVTNDPNGILHKSGVVESIVSSLNISSDPATFI 296

Query: 301 Q 301
           Q
Sbjct: 297 Q 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143324|emb|CBI21885.3| unnamed protein product [Vitis vinifera]

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 196/301 (65%), Positives = 238/301 (79%), Gaps = 4/301 (1%)

Query: 1   MENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPC 60
           MEN   K+WGF+  +EL++   A     R  +  +M +++  D RPVIPLGHGDP+AF C
Sbjct: 1   MENGGRKRWGFQGNEELDK---AASITIRGVLNKVMSNLNPQDHRPVIPLGHGDPSAFSC 57

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120
           FRT  VAEDAIVD++RS  FN YAP  G+  ARRA+AE+L+ DLPYKLS DDI++T+GC 
Sbjct: 58  FRTTPVAEDAIVDALRSRKFNSYAPAVGILPARRAIAEHLSHDLPYKLSPDDIFLTIGCS 117

Query: 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL 180
           +A+E+I+ V+ R GA NILLPRPG+PFYES A  NH+E RHFDLLPE+GWEVDLE V+AL
Sbjct: 118 QAIELIIKVLARPGA-NILLPRPGYPFYESHAAANHLEFRHFDLLPEKGWEVDLEGVKAL 176

Query: 181 ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240
           ADENT A+VIINP NPCGN+ T++HL+K+AETAR LGILVI+DEVY HLAFG  PY+ MG
Sbjct: 177 ADENTVAMVIINPGNPCGNIFTHEHLKKVAETARMLGILVISDEVYAHLAFGGNPYVSMG 236

Query: 241 VFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLI 300
            FGSI PVITLGSISKRWIVPGWR GWL TNDPNG+L KSG+V SI + L + S P+T I
Sbjct: 237 AFGSITPVITLGSISKRWIVPGWRLGWLVTNDPNGILHKSGVVESIVSSLNISSDPATFI 296

Query: 301 Q 301
           Q
Sbjct: 297 Q 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553657|ref|XP_002517869.1| tyrosine aminotransferase, putative [Ricinus communis] gi|223542851|gb|EEF44387.1| tyrosine aminotransferase, putative [Ricinus communis]

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/301 (64%), Positives = 240/301 (79%), Gaps = 4/301 (1%)

Query: 1   MENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPC 60
           MEN    KWGF   + L     A     R  + +L  +++K D R VIPLGHGDP+AFP 
Sbjct: 1   MENGVSTKWGFRANEGLT---AAAAVTVRGVLDALNSNLNKEDERTVIPLGHGDPSAFPS 57

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120
           F TA+ AEDAIVD+++S+ +NCY+P  GL  ARRA+A+YLN DLPY+LS DD+++TLGC 
Sbjct: 58  FLTASAAEDAIVDALKSAKYNCYSPTVGLLPARRAIADYLNIDLPYELSPDDVFVTLGCT 117

Query: 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL 180
           +A+E+ LTV+ R GA NILLPRPG+P+Y   A + H+EVRHFDLLPE+GWEV+ EAVEAL
Sbjct: 118 QAIEVSLTVLGRPGA-NILLPRPGFPYYTGIAAQTHLEVRHFDLLPEKGWEVNFEAVEAL 176

Query: 181 ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240
           ADENTAA+VIINP NPCGNV +Y+HL+KIAETARKLGILVIADEVY HL FGSTP++PMG
Sbjct: 177 ADENTAAMVIINPGNPCGNVYSYEHLKKIAETARKLGILVIADEVYAHLTFGSTPFVPMG 236

Query: 241 VFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLI 300
           VFGS+VPV+TLGSISKRWIVPGWR GWL  +DP G+LQ++G+V SI +CL + S P+T I
Sbjct: 237 VFGSVVPVLTLGSISKRWIVPGWRLGWLVLSDPKGILQETGVVDSITSCLNISSDPATFI 296

Query: 301 Q 301
           Q
Sbjct: 297 Q 297

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133458|ref|XP_002328047.1| aminotransferase family protein [Populus trichocarpa] gi|222837456|gb|EEE75835.1| aminotransferase family protein [Populus trichocarpa]

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 194/301 (64%), Positives = 235/301 (78%), Gaps = 4/301 (1%)

Query: 1   MENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPC 60
           MEN  EK W F+  + +N      V   R  +  L E+++K D R VIPL HGDP+AFPC
Sbjct: 1   MENGTEK-WSFQASKGMNSTASITV---RGVLNRLAETLNKEDKREVIPLAHGDPSAFPC 56

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120
           FRT  VA++AI D+VRS+  N YAP  GL  ARRA A+YLNRDLPYKLS DD+++TLGC 
Sbjct: 57  FRTTPVADEAIFDAVRSAKNNHYAPTVGLLPARRAAADYLNRDLPYKLSPDDVFLTLGCK 116

Query: 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL 180
           +A+EI +TV+  +  AN+LLPRPG+P+YE+ A  + ++VRHFDLLPE+GWEVDLEAVEAL
Sbjct: 117 QAIEIAVTVLAAIPGANVLLPRPGFPYYEARAAHSCLDVRHFDLLPEKGWEVDLEAVEAL 176

Query: 181 ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240
           ADENT A+VIINP NPCG+V +YQHL+K+AETAR LGI+VI+DEVYGHL FGS P++PMG
Sbjct: 177 ADENTVAMVIINPGNPCGSVYSYQHLEKVAETARMLGIMVISDEVYGHLTFGSAPFVPMG 236

Query: 241 VFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLI 300
           VF S VPV+TLGSISKRWIVPGWR GWL TNDPNG+LQ SGIV SIK  L + S P T I
Sbjct: 237 VFASTVPVLTLGSISKRWIVPGWRMGWLVTNDPNGILQDSGIVASIKDYLNISSDPPTFI 296

Query: 301 Q 301
           Q
Sbjct: 297 Q 297

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147811786|emb|CAN63727.1| hypothetical protein VITISV_034866 [Vitis vinifera]

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/292 (65%), Positives = 232/292 (79%), Gaps = 4/292 (1%)

Query: 11  FEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDA 70
           F+  +EL++   A     R  +  +M +++  D RPVIPLGHGDP+AF CFRT   AEDA
Sbjct: 9   FQGNEELDK---AASITIRGVLNKVMSNLNPQDHRPVIPLGHGDPSAFSCFRTTPXAEDA 65

Query: 71  IVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI 130
           IVD++RS  FN YAP  G+  ARRA+AE+L+ DLPYKLS DDI++T+GC +A+E+I+ V+
Sbjct: 66  IVDALRSRKFNSYAPAVGILPARRAIAEHLSHDLPYKLSPDDIFLTIGCSQALELIIKVL 125

Query: 131 TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVI 190
            R GA NILLPRPG+PFYES A  NH+E RHFDLLPE+GWEVDLE V+ALADENT A+VI
Sbjct: 126 ARPGA-NILLPRPGYPFYESHAAANHLEFRHFDLLPEKGWEVDLEGVKALADENTVAMVI 184

Query: 191 INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT 250
           INP NPCGN+ T++HL+K+AETAR LGILVI+DEVY HLAFG  PY+PMG FGSI PVIT
Sbjct: 185 INPGNPCGNIFTHEHLKKVAETARMLGILVISDEVYAHLAFGGNPYVPMGAFGSITPVIT 244

Query: 251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQV 302
           LGSISKRWIVPGWR GWL TNDPNG+L KSG+V SI + L + S P+T IQV
Sbjct: 245 LGSISKRWIVPGWRLGWLVTNDPNGILHKSGVVESIVSSLNISSDPATFIQV 296

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133450|ref|XP_002328045.1| aminotransferase family protein [Populus trichocarpa] gi|222837454|gb|EEE75833.1| aminotransferase family protein [Populus trichocarpa]

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/298 (64%), Positives = 236/298 (79%), Gaps = 4/298 (1%)

Query: 4   EAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRT 63
           E   KW     + L+   E    + R  ++ L + +DK+D RPV+PL HGDP+AF CFRT
Sbjct: 3   EHSAKWIIRGNELLD---ETAATSIRGYLIMLYDHLDKDDQRPVVPLSHGDPSAFACFRT 59

Query: 64  AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV 123
           +  A DAIV +V+S+ FN YAP  G+  ARRAVAEYL+ DLPY LSADDIY+T+GC +++
Sbjct: 60  SPEAVDAIVHAVQSAEFNSYAPTIGILPARRAVAEYLSADLPYNLSADDIYLTVGCTQSI 119

Query: 124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE 183
           E+IL+ + R GA NILLPRPG+P YES A  + +EVRHFDL+PE+GWEVDLE+VEALADE
Sbjct: 120 EVILSALARPGA-NILLPRPGYPLYESRASFSKLEVRHFDLIPEKGWEVDLESVEALADE 178

Query: 184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243
           NTAAIVII+P NPCGNV +YQHL+K+AETARKLGI VIADEVYGH+AFGS PY+PMG FG
Sbjct: 179 NTAAIVIISPGNPCGNVFSYQHLKKVAETARKLGIFVIADEVYGHIAFGSNPYVPMGEFG 238

Query: 244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
           SIVPV++LGSISKRWIVPGWR GW+AT DPNG+L+K GIV SIK+   + S P+T +Q
Sbjct: 239 SIVPVLSLGSISKRWIVPGWRLGWIATCDPNGILKKYGIVDSIKSYFNISSNPATFVQ 296

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446435|ref|XP_002276464.1| PREDICTED: tyrosine aminotransferase isoform 1 [Vitis vinifera]

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/301 (63%), Positives = 234/301 (77%), Gaps = 4/301 (1%)

Query: 1   MENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPC 60
           MEN A ++WGF   Q L++     V   R  +  ++ +++  D RPVI LG GDP+AF C
Sbjct: 1   MENGAAERWGFRGNQVLDKAASITV---RGVLRKVISNLNPQDRRPVITLGQGDPSAFSC 57

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120
           FRTA  AE+AIVD+VRS  F+ Y P  G+  ARRA+AEYL+ DLPYKLS DD+Y+T+GC 
Sbjct: 58  FRTAPEAEEAIVDAVRSREFDSYPPDVGVLPARRAIAEYLSTDLPYKLSPDDVYLTVGCG 117

Query: 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL 180
           +A+E+I+ V+ R GA NILLPRPG+ FYE+ A  NH+E R FDLLPE+ WEVDLE V+AL
Sbjct: 118 QAIELIIKVLARPGA-NILLPRPGYAFYEALAAANHLEFRRFDLLPEKVWEVDLEGVKAL 176

Query: 181 ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240
           ADENT A+VIINP NPCGNV T+QHL+K+AETAR LGILVIADEVYGHL FGS P++PMG
Sbjct: 177 ADENTVAMVIINPGNPCGNVFTHQHLKKVAETARMLGILVIADEVYGHLVFGSNPFVPMG 236

Query: 241 VFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLI 300
           VFGSI PVITLGSISKRWIVPGWR GWL TNDPNG+L KSGIV +I + L + + P++ I
Sbjct: 237 VFGSITPVITLGSISKRWIVPGWRLGWLVTNDPNGILCKSGIVETIVSYLNICADPTSFI 296

Query: 301 Q 301
           Q
Sbjct: 297 Q 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143330|emb|CBI21891.3| unnamed protein product [Vitis vinifera]

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/301 (63%), Positives = 234/301 (77%), Gaps = 4/301 (1%)

Query: 1   MENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPC 60
           MEN A ++WGF   Q L++   A     R  +  ++ +++  D RPVI LG GDP+AF C
Sbjct: 100 MENGAAERWGFRGNQVLDK---AASITVRGVLRKVISNLNPQDRRPVITLGQGDPSAFSC 156

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120
           FRTA  AE+AIVD+VRS  F+ Y P  G+  ARRA+AEYL+ DLPYKLS DD+Y+T+GC 
Sbjct: 157 FRTAPEAEEAIVDAVRSREFDSYPPDVGVLPARRAIAEYLSTDLPYKLSPDDVYLTVGCG 216

Query: 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL 180
           +A+E+I+ V+ R GA NILLPRPG+ FYE+ A  NH+E R FDLLPE+ WEVDLE V+AL
Sbjct: 217 QAIELIIKVLARPGA-NILLPRPGYAFYEALAAANHLEFRRFDLLPEKVWEVDLEGVKAL 275

Query: 181 ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240
           ADENT A+VIINP NPCGNV T+QHL+K+AETAR LGILVIADEVYGHL FGS P++PMG
Sbjct: 276 ADENTVAMVIINPGNPCGNVFTHQHLKKVAETARMLGILVIADEVYGHLVFGSNPFVPMG 335

Query: 241 VFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLI 300
           VFGSI PVITLGSISKRWIVPGWR GWL TNDPNG+L KSGIV +I + L + + P++ I
Sbjct: 336 VFGSITPVITLGSISKRWIVPGWRLGWLVTNDPNGILCKSGIVETIVSYLNICADPTSFI 395

Query: 301 Q 301
           Q
Sbjct: 396 Q 396

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	311
TAIR|locus:2154714	414	TAT7 "tyrosine aminotransferas	0.855	0.642	0.614	5.9e-89
UNIPROTKB|Q9ST02	461	naat-A "Nicotianamine aminotra	0.881	0.594	0.574	4.1e-88
UNIPROTKB|Q9ST03	551	naat-B "Nicotianamine aminotra	0.983	0.555	0.528	4.7e-87
TAIR|locus:2158926	420	AT5G36160 [Arabidopsis thalian	0.948	0.702	0.54	4.3e-86
TAIR|locus:2046056	462	SUR1 "SUPERROOT 1" [Arabidopsi	0.909	0.612	0.531	1e-82
TAIR|locus:2121407	449	AT4G28420 [Arabidopsis thalian	0.897	0.621	0.517	6e-80
TAIR|locus:2121382	447	AT4G28410 [Arabidopsis thalian	0.900	0.626	0.508	2.6e-79
TAIR|locus:2047441	445	TAT3 "tyrosine aminotransferas	0.900	0.629	0.510	2.1e-75
TAIR|locus:2128434	424	AT4G23590 [Arabidopsis thalian	0.906	0.665	0.464	9.4e-66
TAIR|locus:2128459	422	CORI3 "CORONATINE INDUCED 1" [	0.800	0.590	0.470	1e-59

TAIR|locus:2154714 TAT7 "tyrosine aminotransferase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 888 (317.7 bits), Expect = 5.9e-89, P = 5.9e-89
 Identities = 166/270 (61%), Positives = 206/270 (76%)

Query:    35 LMESVDKNDP---RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPL 91
             LMES+   +    + VI LG GDP  + CFRT  V+  A+ DS+ S+ F+ Y+P  GLP 
Sbjct:    20 LMESITTEEDEGGKRVISLGMGDPTLYSCFRTTQVSLQAVSDSLLSNKFHGYSPTVGLPQ 79

Query:    92 ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF 151
             ARRA+AEYL+RDLPYKLS DD++IT GC +A+++ L+++ R   ANILLPRPG+P YE  
Sbjct:    80 ARRAIAEYLSRDLPYKLSQDDVFITSGCTQAIDVALSMLAR-PRANILLPRPGFPIYELC 138

Query:   152 AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
             AK  H+EVR+ DLLPE GWE+DL+AVEALADENT A+V+INP NPCGNV +YQHL KIAE
Sbjct:   139 AKFRHLEVRYVDLLPENGWEIDLDAVEALADENTVALVVINPGNPCGNVYSYQHLMKIAE 198

Query:   212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271
             +A+KLG LVIADEVYGHLAFGS P++PMGVFGSIVPV+TLGS+SKRWIVPGWR GW  T 
Sbjct:   199 SAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTT 258

Query:   272 DPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
             DP+G  +   I+   K    +  GP+T IQ
Sbjct:   259 DPSGSFKDPKIIERFKKYFDILGGPATFIQ 288

GO:0005737 "cytoplasm" evidence=ISM

GO:0008483 "transaminase activity" evidence=ISS

GO:0009058 "biosynthetic process" evidence=ISS

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IGI;IMP;IDA;TAS

GO:0010189 "vitamin E biosynthetic process" evidence=IEP;IMP

UNIPROTKB|Q9ST02 naat-A "Nicotianamine aminotransferase A" [Hordeum vulgare (taxid:4513)]

 Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
 Identities = 159/277 (57%), Positives = 213/277 (76%)

Query:    25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA 84
             + A RY I +   SV+++ PRPV+PL HGDP+ FP FRTA  AEDA+  ++R+  FNCYA
Sbjct:    61 IRAIRYKISA---SVEESGPRPVLPLAHGDPSVFPAFRTAVEAEDAVAAALRTGQFNCYA 117

Query:    85 PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPG 144
                GLP AR AVAE+L++ +PYKLSADD+++T G  +A+E+I+ V+ +   ANILLPRPG
Sbjct:   118 AGVGLPAARSAVAEHLSQGVPYKLSADDVFLTAGGTQAIEVIIPVLAQTAGANILLPRPG 177

Query:   145 WPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204
             +P YE+ A  N +EVRHFDL+P++GWE+D++++E++AD+NT A+VIINP NPCG+V +Y 
Sbjct:   178 YPNYEARAAFNKLEVRHFDLIPDKGWEIDIDSLESIADKNTTAMVIINPNNPCGSVYSYD 237

Query:   205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR 264
             HL K+AE ARKLGILVIADEVYG L  GS P+IPMGVFG I PV+++GS+SK WIVPGWR
Sbjct:   238 HLAKVAEVARKLGILVIADEVYGKLVLGSAPFIPMGVFGHIAPVLSIGSLSKSWIVPGWR 297

Query:   265 FGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
              GW+A  DP  +L+K+ I  SI   L V + P+T +Q
Sbjct:   298 LGWVAVYDPTKILEKTKISTSITNYLNVSTDPATFVQ 334

GO:0033855 "nicotianamine aminotransferase activity" evidence=IDA

UNIPROTKB|Q9ST03 naat-B "Nicotianamine aminotransferase B" [Hordeum vulgare (taxid:4513)]

 Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
 Identities = 165/312 (52%), Positives = 221/312 (70%)

Query:     2 ENEAEKKWGFE-VKQELNREREAEVA--AFRYAIVSLMESVDKNDPRPVIPLGHGDPAAF 58
             E E   +W F   K  +     A ++  A RY I +   SV +  PRPV+PL HGDP+ F
Sbjct:   125 EEEEAVEWNFAGAKDGVLAATGANMSIRAIRYKISA---SVQEKGPRPVLPLAHGDPSVF 181

Query:    59 PCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG 118
             P FRTA  AEDA+  +VR+  FNCY    GLP AR AVAE+L++ +PY LSADD+++T G
Sbjct:   182 PAFRTAVEAEDAVAAAVRTGQFNCYPAGVGLPAARSAVAEHLSQGVPYMLSADDVFLTAG 241

Query:   119 CMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVE 178
               +A+E+I+ V+ +   ANILLPRPG+P YE+ A  N +EVRHFDL+P++GWE+D++++E
Sbjct:   242 GTQAIEVIIPVLAQTAGANILLPRPGYPNYEARAAFNRLEVRHFDLIPDKGWEIDIDSLE 301

Query:   179 ALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP 238
             ++AD+NT A+VIINP NPCG+V +Y HL K+AE A++LGILVIADEVYG L  GS P+IP
Sbjct:   302 SIADKNTTAMVIINPNNPCGSVYSYDHLSKVAEVAKRLGILVIADEVYGKLVLGSAPFIP 361

Query:   239 MGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPST 298
             MGVFG I PV+++GS+SK WIVPGWR GW+A  DP  +LQ++ I  SI   L V + P+T
Sbjct:   362 MGVFGHITPVLSIGSLSKSWIVPGWRLGWVAVYDPRKILQETKISTSITNYLNVSTDPAT 421

Query:   299 LIQVCEMFLLVN 310
              IQ     +L N
Sbjct:   422 FIQAALPQILEN 433

GO:0033855 "nicotianamine aminotransferase activity" evidence=IDA

TAIR|locus:2158926 AT5G36160 [Arabidopsis thaliana (taxid:3702)]

 Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
 Identities = 162/300 (54%), Positives = 217/300 (72%)

Query:     2 ENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCF 61
             EN A K+W F   + + R     +  +   + +L+  +D  D RPVIPLGHGDP+ FP F
Sbjct:     3 ENGA-KRWNFGANEVVERSNSLTIRDY---LNTLINCLDGGDVRPVIPLGHGDPSPFPSF 58

Query:    62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME 121
             RT   A +AI D+VRS+ FN Y+   G+P+AR+AVAEYL+ DL Y++S +D++IT GC++
Sbjct:    59 RTDQAAVEAICDAVRSTKFNNYSSSSGVPVARKAVAEYLSSDLSYQISPNDVHITAGCVQ 118

Query:   122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181
             A+EI+++ +   GA NILLPRP +P Y+S A    +EVR+FDLLPE GW+VDL+ VEALA
Sbjct:   119 AIEILISALAIPGA-NILLPRPTYPMYDSRAAFCQLEVRYFDLLPENGWDVDLDGVEALA 177

Query:   182 DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV 241
             D+ T AI++INPCNPCGNV + QHLQKIAETA KLGILVIADEVY H AFG  P++ M  
Sbjct:   178 DDKTVAILVINPCNPCGNVFSRQHLQKIAETACKLGILVIADEVYDHFAFGDKPFVSMAE 237

Query:   242 FGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
             F  +VPVI LG+ISKRW VPGWR GW+ T DP+G+++ SG V ++   + + + P+T IQ
Sbjct:   238 FAELVPVIVLGAISKRWFVPGWRLGWMVTLDPHGIMKDSGFVQTLINVVNMSTDPATFIQ 297

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;IDA

GO:0008483 "transaminase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0006559 "L-phenylalanine catabolic process" evidence=IGI

GO:0006572 "tyrosine catabolic process" evidence=IGI

TAIR|locus:2046056 SUR1 "SUPERROOT 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
 Identities = 151/284 (53%), Positives = 205/284 (72%)

Query:    18 NREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS 77
             ++  +A     R  I  L ++  K+  + ++PLGHGDP+ +PCFRT   AEDA+VD +RS
Sbjct:    39 DKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS 98

Query:    78 SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAAN 137
                N Y P  G+  ARRAVA+Y+NRDLP+KL+ +DI++T GC + +EI+   + R  A N
Sbjct:    99 GKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNA-N 157

Query:   138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC 197
             ILLPRPG+P Y++ A  + +EVR FDLLPE+ WE+DLE +EA+ADENT A+V+INP NPC
Sbjct:   158 ILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPC 217

Query:   198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR 257
             GNV ++ HL+K+AETARKLGI+VI+DEVY    FG  P++ MG F SIVPV+TL  ISK 
Sbjct:   218 GNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKG 277

Query:   258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
             W+VPGW+ GW+A NDP GV + + ++ SIK  L V   P+T+IQ
Sbjct:   278 WVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQ 321

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;RCA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0016846 "carbon-sulfur lyase activity" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA;IMP

GO:0080108 "S-alkylthiohydroximate lyase activity" evidence=IMP

GO:0001560 "regulation of cell growth by extracellular stimulus" evidence=IMP

GO:0048830 "adventitious root development" evidence=TAS

GO:0016020 "membrane" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=IMP;RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0019760 "glucosinolate metabolic process" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

TAIR|locus:2121407 AT4G28420 [Arabidopsis thaliana (taxid:3702)]

 Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
 Identities = 145/280 (51%), Positives = 200/280 (71%)

Query:    22 EAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN 81
             +A     R  +  L +    +  +P++PL HGDP+ +PC+RT+ + E+A+VD +RS   N
Sbjct:    37 KASSVTMRVIVYKLFDECSLDVKKPLLPLAHGDPSVYPCYRTSILVENAVVDVLRSGKGN 96

Query:    82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLP 141
              Y P  G+  AR+AVA+Y+NRDL  K+  +D++IT+GC + +E++L  + R  A NILLP
Sbjct:    97 SYGPAAGILPARQAVADYVNRDLTNKVKPNDVFITVGCNQGIEVVLQSLARPNA-NILLP 155

Query:   142 RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201
             RP +P YE+ A  + +EVR FDLLPE+ WE+DL  +EA+ADENT A+VIINP NPCGNV 
Sbjct:   156 RPSYPHYEARAVYSGLEVRKFDLLPEKEWEIDLPGIEAMADENTVAMVIINPNNPCGNVY 215

Query:   202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP 261
             +Y HL+K+AETA+KLGI+VI DEVY    FG  P++PMG F SI PVITLG ISK WIVP
Sbjct:   216 SYDHLKKVAETAKKLGIMVITDEVYCQTIFGDKPFVPMGEFSSITPVITLGGISKGWIVP 275

Query:   262 GWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
             GWR GW+A NDP G+L+ +G+V SI+  L +    +T++Q
Sbjct:   276 GWRIGWIALNDPRGILKSTGMVQSIQQNLDITPDATTIVQ 315

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2121382 AT4G28410 [Arabidopsis thaliana (taxid:3702)]

 Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
 Identities = 143/281 (50%), Positives = 202/281 (71%)

Query:    21 REAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF 80
             +EA   + +  +  L +   K+  + ++PLGHGDP+ +PCF+T+  AE+A+V+S+RS   
Sbjct:    44 KEAASVSMKGTLARLFDCCSKDVKKTILPLGHGDPSVYPCFQTSVDAEEAVVESLRSGAA 103

Query:    81 NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140
             N YAP  G+  ARRAVA YLNRDLP+K+ +DDI++T+GC + +E ++  +     ANILL
Sbjct:   104 NSYAPGVGILPARRAVANYLNRDLPHKIHSDDIFMTVGCCQGIETMIHALAG-PKANILL 162

Query:   141 PRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV 200
             P   +P Y S A  + +E+R ++LLP+  WE+DL+ VEA+ADENT A+VI+NP NPCGNV
Sbjct:   163 PTLIYPLYNSHAIHSLVEIRKYNLLPDLDWEIDLQGVEAMADENTIAVVIMNPHNPCGNV 222

Query:   201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIV 260
              TY+HL+K+AE ARKLGI+VI+DEVY    +G   ++PMG+F SI PV+TLGSISK W+V
Sbjct:   223 YTYEHLKKVAEVARKLGIMVISDEVYNQTIYGENKFVPMGIFSSITPVVTLGSISKGWLV 282

Query:   261 PGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
             PGWR GW+A NDP  V + + +V SIK  L +   PST++Q
Sbjct:   283 PGWRIGWIAMNDPKNVFKTTRVVESIKEHLDISPDPSTILQ 323

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2047441 TAT3 "tyrosine aminotransferase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
 Identities = 143/280 (51%), Positives = 194/280 (69%)

Query:    22 EAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN 81
             +A     R     + ++   N  + ++    G+P+A   FRT   AE+A+  + RS M N
Sbjct:    26 DAAAVTLRKLAFGMFKNCTMNSGKTILFPTPGEPSAHSNFRTCPEAEEAVAAAARSGMAN 85

Query:    82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLP 141
              YAP  G+  ARRAVAEYLN +LP KL A+D+YIT GC +A+EI++  +    +ANILLP
Sbjct:    86 SYAPSPGVFKARRAVAEYLNGELPTKLKAEDVYITGGCNQAIEIVIDSLAGNPSANILLP 145

Query:   142 RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201
             RPG+P Y++ A  + +E+R +DLLPE  WE++L+ +EA ADENT A+VIINP NPCGNV 
Sbjct:   146 RPGYPHYDARAVYSGLEIRKYDLLPESDWEINLDGLEAAADENTVAMVIINPNNPCGNVY 205

Query:   202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP 261
             TY HL K+AE ARKLGI++I+DEVY H+ +G  P+IPMG F SI PVITLGSISK W+ P
Sbjct:   206 TYDHLNKVAEMARKLGIMIISDEVYDHVVYGDKPFIPMGKFASIAPVITLGSISKGWVNP 265

Query:   262 GWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
             GWR GW+A NDPNG+   +G+V +I+  L +   PS ++Q
Sbjct:   266 GWRVGWIAMNDPNGIFVSTGVVQAIEDFLDLTPQPSFILQ 305

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP;RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=ISS

TAIR|locus:2128434 AT4G23590 [Arabidopsis thaliana (taxid:3702)]

 Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
 Identities = 136/293 (46%), Positives = 189/293 (64%)

Query:     9 WGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAE 68
             W F       +  +A +  +   I SL +   K    P++P     P +     T+  AE
Sbjct:     9 WQFSGSDAAEKAAQASLGTYSSEIFSLCDPQGK----PILP-----PLSEEA-ETSHTAE 58

Query:    69 DAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILT 128
              A+V +V     N YAP  GLP+A+RAVAEYLNRDL  KL+ DD+Y+T+GC +A+E+ ++
Sbjct:    59 KAVVKAVLCGTGNAYAPSIGLPVAKRAVAEYLNRDLDNKLTGDDVYMTVGCKQAIELAVS 118

Query:   129 VITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAI 188
             ++ +   ANILLPRPG+P+    +   H+EVR ++ +PER +E+D  +V  + DENT AI
Sbjct:   119 ILAK-PKANILLPRPGFPWDMVHSIYKHLEVRRYEFIPERDFEIDFNSVREMVDENTFAI 177

Query:   189 VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV 248
              IINP NP GN  T  HL+++A  AR+LGI+V++DEVY    FGS P++PMG F SIVPV
Sbjct:   178 FIINPHNPNGNYYTEAHLKQLATLARELGIMVVSDEVYRWSVFGSNPFVPMGKFSSIVPV 237

Query:   249 ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
             ITLGSISK WIVPGWR GWLA +D NGV + + ++ + K  L + S P T+IQ
Sbjct:   238 ITLGSISKGWIVPGWRTGWLALHDLNGVFRSTKVLKAAKEFLEITSKPPTVIQ 290

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2128459 CORI3 "CORONATINE INDUCED 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
 Identities = 119/253 (47%), Positives = 172/253 (67%)

Query:    52 HGDPAAFP---CFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKL 108
             HG P   P      T+  AE A+V +V     N YAP  GL  A+ AVAEYLN+ LP KL
Sbjct:    39 HGKPILPPRNEILETSNTAEKAVVKAVLYGSGNAYAPSLGLAAAKSAVAEYLNQGLPKKL 98

Query:   109 SADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER 168
             +ADD+++TLGC +A+E+ + ++ +   AN+LLP PG+P+    +   ++EVRH++ LPE+
Sbjct:    99 TADDVFMTLGCKQAIELAVDILAK-PKANVLLPSPGFPWDLVRSIYKNLEVRHYNFLPEK 157

Query:   169 GWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH 228
              +E+D ++V AL DENT AI IINP NP GN  +  HL+++AE A++L I+V++DEV+  
Sbjct:   158 NFEIDFDSVRALVDENTFAIFIINPHNPNGNTYSEAHLKQLAELAKELKIMVVSDEVFRW 217

Query:   229 LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA 288
               FGS P++PMG F SIVPV+TLGSISK W VPGWR GWL  +D +GV + + ++ + + 
Sbjct:   218 TLFGSNPFVPMGKFSSIVPVVTLGSISKGWKVPGWRTGWLTLHDLDGVFRNTKVLQAAQD 277

Query:   289 CLGVRSGPSTLIQ 301
              L + + P T+IQ
Sbjct:   278 FLQINNNPPTVIQ 290

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;IEP

GO:0008483 "transaminase activity" evidence=IEA;ISS;NAS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0010188 "response to microbial phytotoxin" evidence=IEP

GO:0004021 "L-alanine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0004121 "cystathionine beta-lyase activity" evidence=IDA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0042538 "hyperosmotic salinity response" evidence=TAS

GO:0050362 "L-tryptophan:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0048046 "apoplast" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FN30	TAT2_ARATH	2, ., 6, ., 1, ., -	0.6148	0.8553	0.6425	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	311
PLN00145	430	PLN00145, PLN00145, tyrosine/nicotianamine aminotr	1e-156
PLN00143	409	PLN00143, PLN00143, tyrosine/nicotianamine aminotr	1e-138
PLN02656	409	PLN02656, PLN02656, tyrosine transaminase	1e-138
TIGR01265	403	TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine	1e-136
PLN02187	462	PLN02187, PLN02187, rooty/superroot1	1e-113
TIGR01264	401	TIGR01264, tyr_amTase_E, tyrosine aminotransferase	1e-75
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	3e-56
PTZ00433	412	PTZ00433, PTZ00433, tyrosine aminotransferase; Pro	7e-54
COG0436	393	COG0436, COG0436, Aspartate/tyrosine/aromatic amin	2e-47
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	1e-37
PRK05764	393	PRK05764, PRK05764, aspartate aminotransferase; Pr	9e-34
PRK08363	398	PRK08363, PRK08363, alanine aminotransferase; Vali	1e-32
PRK07568	397	PRK07568, PRK07568, aspartate aminotransferase; Pr	8e-28
PTZ00377	481	PTZ00377, PTZ00377, alanine aminotransferase; Prov	8e-27
PRK06108	382	PRK06108, PRK06108, aspartate aminotransferase; Pr	2e-24
PRK07777	387	PRK07777, PRK07777, aminotransferase; Validated	6e-24
PRK09265	404	PRK09265, PRK09265, aminotransferase AlaT; Validat	3e-23
PRK13355	517	PRK13355, PRK13355, bifunctional HTH-domain contai	6e-23
PRK07309	391	PRK07309, PRK07309, aromatic amino acid aminotrans	1e-21
COG1167	459	COG1167, ARO8, Transcriptional regulators containi	2e-21
PRK06348	384	PRK06348, PRK06348, aspartate aminotransferase; Pr	2e-20
PRK06225	380	PRK06225, PRK06225, aspartate aminotransferase; Pr	1e-19
PRK06836	394	PRK06836, PRK06836, aspartate aminotransferase; Pr	5e-19
PRK07324	373	PRK07324, PRK07324, transaminase; Validated	8e-19
PLN00175	413	PLN00175, PLN00175, aminotransferase family protei	2e-18
PRK06855	433	PRK06855, PRK06855, aminotransferase; Validated	3e-18
PRK08912	387	PRK08912, PRK08912, hypothetical protein; Provisio	1e-17
PRK07683	387	PRK07683, PRK07683, aminotransferase A; Validated	2e-17
COG1168	388	COG1168, MalY, Bifunctional PLP-dependent enzyme w	2e-17
PRK07682	378	PRK07682, PRK07682, hypothetical protein; Validate	1e-16
COG0079	356	COG0079, HisC, Histidinol-phosphate/aromatic amino	4e-16
PRK08361	391	PRK08361, PRK08361, aspartate aminotransferase; Pr	6e-16
PRK09082	386	PRK09082, PRK09082, methionine aminotransferase; V	8e-16
TIGR03538	393	TIGR03538, DapC_gpp, succinyldiaminopimelate trans	1e-15
PRK07550	386	PRK07550, PRK07550, hypothetical protein; Provisio	9e-15
PLN02368	407	PLN02368, PLN02368, alanine transaminase	1e-14
PRK07337	388	PRK07337, PRK07337, aminotransferase; Validated	7e-14
TIGR03947	359	TIGR03947, viomycin_VioD, capreomycidine synthase	9e-14
PRK09440	416	PRK09440, avtA, valine--pyruvate transaminase; Pro	3e-13
TIGR04350	384	TIGR04350, C_S_lyase_PatB, putative C-S lyase	3e-13
TIGR03540	383	TIGR03540, DapC_direct, LL-diaminopimelate aminotr	3e-13
TIGR01141	346	TIGR01141, hisC, histidinol-phosphate aminotransfe	4e-13
PRK08960	387	PRK08960, PRK08960, hypothetical protein; Provisio	7e-13
COG1448	396	COG1448, TyrB, Aspartate/tyrosine/aromatic aminotr	2e-12
COG3977	417	COG3977, COG3977, Alanine-alpha-ketoisovalerate (o	4e-12
PRK05957	389	PRK05957, PRK05957, aspartate aminotransferase; Pr	5e-12
TIGR03537	350	TIGR03537, DapC, succinyldiaminopimelate transamin	5e-12
PLN02231	534	PLN02231, PLN02231, alanine transaminase	1e-11
TIGR03539	357	TIGR03539, DapC_actino, succinyldiaminopimelate tr	6e-11
PRK12414	384	PRK12414, PRK12414, putative aminotransferase; Pro	1e-10
PRK06358	354	PRK06358, PRK06358, threonine-phosphate decarboxyl	6e-10
PRK06290	410	PRK06290, PRK06290, aspartate aminotransferase; Pr	6e-10
PRK03967	337	PRK03967, PRK03967, histidinol-phosphate aminotran	7e-10
PRK09147	396	PRK09147, PRK09147, succinyldiaminopimelate transa	8e-10
PRK06107	402	PRK06107, PRK06107, aspartate aminotransferase; Pr	8e-10
PRK09276	385	PRK09276, PRK09276, LL-diaminopimelate aminotransf	1e-09
PRK05839	374	PRK05839, PRK05839, hypothetical protein; Provisio	2e-09
PRK07681	399	PRK07681, PRK07681, aspartate aminotransferase; Pr	2e-09
TIGR03542	402	TIGR03542, DAPAT_plant, LL-diaminopimelate aminotr	4e-09
PRK08175	395	PRK08175, PRK08175, aminotransferase; Validated	7e-09
PRK07865	364	PRK07865, PRK07865, N-succinyldiaminopimelate amin	9e-09
PRK08068	389	PRK08068, PRK08068, transaminase; Reviewed	2e-08
PLN02607	447	PLN02607, PLN02607, 1-aminocyclopropane-1-carboxyl	4e-08
PRK08056	356	PRK08056, PRK08056, threonine-phosphate decarboxyl	7e-08
TIGR01140	330	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phospha	7e-08
PRK03158	359	PRK03158, PRK03158, histidinol-phosphate aminotran	2e-07
PRK09148	405	PRK09148, PRK09148, aminotransferase; Validated	2e-07
cd01494	170	cd01494, AAT_I, Aspartate aminotransferase (AAT) s	2e-07
pfam01053	382	pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP	3e-07
PRK14807	351	PRK14807, PRK14807, histidinol-phosphate aminotran	4e-07
PLN02450	468	PLN02450, PLN02450, 1-aminocyclopropane-1-carboxyl	5e-07
PRK05942	394	PRK05942, PRK05942, aspartate aminotransferase; Pr	8e-07
PRK08637	388	PRK08637, PRK08637, hypothetical protein; Provisio	1e-06
PRK00451	447	PRK00451, PRK00451, glycine dehydrogenase subunit	2e-06
PRK14809	357	PRK14809, PRK14809, histidinol-phosphate aminotran	2e-06
PRK09275	527	PRK09275, PRK09275, aspartate aminotransferase; Pr	3e-06
COG0626	396	COG0626, MetC, Cystathionine beta-lyases/cystathio	4e-06
PRK06207	405	PRK06207, PRK06207, aspartate aminotransferase; Pr	6e-06
COG2873	426	COG2873, MET17, O-acetylhomoserine sulfhydrylase [	2e-05
cd00614	369	cd00614, CGS_like, CGS_like: Cystathionine gamma-s	2e-05
pfam00266	370	pfam00266, Aminotran_5, Aminotransferase class-V	2e-05
PRK07671	377	PRK07671, PRK07671, cystathionine beta-lyase; Prov	3e-05
PLN03026	380	PLN03026, PLN03026, histidinol-phosphate aminotran	3e-05
COG0520	405	COG0520, csdA, Selenocysteine lyase/Cysteine desul	6e-05
COG4992	404	COG4992, ArgD, Ornithine/acetylornithine aminotran	9e-05
PRK02731	367	PRK02731, PRK02731, histidinol-phosphate aminotran	1e-04
PRK06425	332	PRK06425, PRK06425, histidinol-phosphate aminotran	1e-04
TIGR01326	418	TIGR01326, OAH_OAS_sulfhy, OAH/OAS sulfhydrylase	1e-04
PRK13360	442	PRK13360, PRK13360, omega amino acid--pyruvate tra	1e-04
PRK02610	374	PRK02610, PRK02610, histidinol-phosphate aminotran	2e-04
TIGR03801	521	TIGR03801, asp_4_decarbox, aspartate 4-decarboxyla	2e-04
cd06453	373	cd06453, SufS_like, Cysteine desulfurase (SufS)-li	2e-04
PLN02376	496	PLN02376, PLN02376, 1-aminocyclopropane-1-carboxyl	4e-04
PRK01533	366	PRK01533, PRK01533, histidinol-phosphate aminotran	5e-04
PRK00950	361	PRK00950, PRK00950, histidinol-phosphate aminotran	5e-04
PRK05166	371	PRK05166, PRK05166, histidinol-phosphate aminotran	6e-04
PRK02627	396	PRK02627, PRK02627, acetylornithine aminotransfera	6e-04
PRK09221	445	PRK09221, PRK09221, beta alanine--pyruvate transam	8e-04
PRK01688	351	PRK01688, PRK01688, histidinol-phosphate aminotran	9e-04
PRK06084	425	PRK06084, PRK06084, O-acetylhomoserine aminocarbox	0.001
cd00613	398	cd00613, GDC-P, Glycine cleavage system P-protein,	0.001
PRK07590	409	PRK07590, PRK07590, L,L-diaminopimelate aminotrans	0.001
PRK04870	356	PRK04870, PRK04870, histidinol-phosphate aminotran	0.002
cd00610	413	cd00610, OAT_like, Acetyl ornithine aminotransfera	0.003
PRK03715	395	PRK03715, argD, acetylornithine transaminase prote	0.004
PRK08247	366	PRK08247, PRK08247, cystathionine gamma-synthase;	0.004
pfam01212	288	pfam01212, Beta_elim_lyase, Beta-eliminating lyase	0.004
PRK08354	311	PRK08354, PRK08354, putative aminotransferase; Pro	0.004

>gnl|CDD|215074 PLN00145, PLN00145, tyrosine/nicotianamine aminotransferase; Provisional

 Score =  444 bits (1144), Expect = e-156
 Identities = 185/308 (60%), Positives = 229/308 (74%), Gaps = 8/308 (2%)

Query: 1   MENEAEKKWGFEVKQELNRER-EAEVAA-----FRYAIVSLMESVDKND-PRPVIPLGHG 53
           ME       G         ER  A +AA      R  +  +   VD    PRPV+PLGHG
Sbjct: 1   MEGGGGGGGGGHATARWRFERANAALAAAGALSIRAVLNRVKACVDAGGGPRPVLPLGHG 60

Query: 54  DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDI 113
           DP+AFPCFRTA  AEDA+  ++RS  +N Y+   GL  ARRA+AEYL+RDLPY+LS DDI
Sbjct: 61  DPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDI 120

Query: 114 YITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVD 173
           Y+T GC +A+EII++V+ + GA NILLPRPG+P YE+ A  + +EVRHFDLLPERGWEVD
Sbjct: 121 YLTAGCAQAIEIIMSVLAQPGA-NILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVD 179

Query: 174 LEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
           LE VEALADENT A+VIINP NPCG+V +Y+HL KIAETARKLGILVIADEVY HL FGS
Sbjct: 180 LEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGS 239

Query: 234 TPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVR 293
            P++PMGVFG + PV+TLGSISKRW+VPGWR GW+AT DPNG+L+++ +V SI+  L + 
Sbjct: 240 KPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNIS 299

Query: 294 SGPSTLIQ 301
           + P+T +Q
Sbjct: 300 TDPATFVQ 307

Length = 430

>gnl|CDD|165711 PLN00143, PLN00143, tyrosine/nicotianamine aminotransferase; Provisional

 Score =  397 bits (1021), Expect = e-138
 Identities = 172/271 (63%), Positives = 212/271 (78%), Gaps = 1/271 (0%)

Query: 31  AIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLP 90
           A+  L E+ +++D R  I  G GDP+ F CFRT  +AEDAIV++VRS+ FN YAP  G+ 
Sbjct: 18  AVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGIL 77

Query: 91  LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES 150
            ARRA+A+YL+ DLPY+LS DD+Y+TLGC  A EII+ V+ R  A NILLPRPG+P  E+
Sbjct: 78  PARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEA-NILLPRPGFPDVET 136

Query: 151 FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIA 210
           +A  +H+E+RHFDLLPE+GWEVDL+AVEA+ADENT A+VIINP NPCG+V +Y+HL KIA
Sbjct: 137 YAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIA 196

Query: 211 ETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT 270
           ETARKLGILVIADEVYGH+ FGS P++PMG+F SIVPVITLGSISKRW++PGW  GWL T
Sbjct: 197 ETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVT 256

Query: 271 NDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
            DP+G+LQ   I  SIK  L     P T IQ
Sbjct: 257 CDPSGLLQICEIADSIKKALNPAPFPPTFIQ 287

Length = 409

>gnl|CDD|178262 PLN02656, PLN02656, tyrosine transaminase

 Score =  396 bits (1020), Expect = e-138
 Identities = 174/268 (64%), Positives = 214/268 (79%), Gaps = 2/268 (0%)

Query: 35  LMESV-DKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLAR 93
           LMES+ D+ + + VI LG GDP A+ CF T  VA++A+VD+++S+ FN YAP  GLP AR
Sbjct: 20  LMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQAR 79

Query: 94  RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK 153
           RA+AEYL+RDLPYKLS DD++IT GC +A+++ L+++ R GA NILLPRPG+P YE  A 
Sbjct: 80  RAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGA-NILLPRPGFPIYELCAA 138

Query: 154 RNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETA 213
             H+EVR+ DLLPE+GWEVDL+AVEALAD+NT A+VIINP NPCGNV +YQHL+KIAETA
Sbjct: 139 FRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHLKKIAETA 198

Query: 214 RKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273
            KL ILVIADEVYGHLAFGS P++PMGVFGSIVPV+TLGS+SKRWIVPGWR GW  T DP
Sbjct: 199 EKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDP 258

Query: 274 NGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
           +G  +   IV  IK    +  GP+T IQ
Sbjct: 259 SGSFRDPKIVERIKKYFDILGGPATFIQ 286

Length = 409

>gnl|CDD|188123 TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine family aminotransferase

 Score =  392 bits (1009), Expect = e-136
 Identities = 141/257 (54%), Positives = 189/257 (73%), Gaps = 2/257 (0%)

Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
           +PVIPL HGDP+ F   RT   AE+A+ D++RS  FN YAP  G   AR AVAEYL+ DL
Sbjct: 31  KPVIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDL 90

Query: 105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL 164
           P KL+ADD+ +T GC +A+EI +  +   GA NIL+PRPG+P Y++ A  + +EVR +DL
Sbjct: 91  PGKLTADDVVLTSGCSQAIEICIEALANPGA-NILVPRPGFPLYDTRAAFSGLEVRLYDL 149

Query: 165 LPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224
           LPE+ WE+DL+ +E+LADE T AIV+INP NPCG+V +  HLQKIAE A KLGI +IADE
Sbjct: 150 LPEKDWEIDLDGLESLADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVAEKLGIPIIADE 209

Query: 225 VYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVG 284
           +YGH+ FG  P+IPM  F SIVPV++LG ISKRW+VPGWR GW+  +DP+G+ + + ++ 
Sbjct: 210 IYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDT-VLQ 268

Query: 285 SIKACLGVRSGPSTLIQ 301
            +K  L    GP+T++Q
Sbjct: 269 GLKNLLQRILGPATIVQ 285

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley. Length = 403

>gnl|CDD|215119 PLN02187, PLN02187, rooty/superroot1

 Score =  334 bits (857), Expect = e-113
 Identities = 151/284 (53%), Positives = 205/284 (72%), Gaps = 1/284 (0%)

Query: 18  NREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS 77
           ++  +A     R  I  L ++  K+  + ++PLGHGDP+ +PCFRT   AEDA+VD +RS
Sbjct: 39  DKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS 98

Query: 78  SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAAN 137
              N Y P  G+  ARRAVA+Y+NRDLP+KL+ +DI++T GC + +EI+   + R  A N
Sbjct: 99  GKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNA-N 157

Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC 197
           ILLPRPG+P Y++ A  + +EVR FDLLPE+ WE+DLE +EA+ADENT A+V+INP NPC
Sbjct: 158 ILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPC 217

Query: 198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR 257
           GNV ++ HL+K+AETARKLGI+VI+DEVY    FG  P++ MG F SIVPV+TL  ISK 
Sbjct: 218 GNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKG 277

Query: 258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
           W+VPGW+ GW+A NDP GV + + ++ SIK  L V   P+T+IQ
Sbjct: 278 WVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQ 321

Length = 462

>gnl|CDD|188122 TIGR01264, tyr_amTase_E, tyrosine aminotransferase, eukaryotic

 Score =  236 bits (605), Expect = 1e-75
 Identities = 107/271 (39%), Positives = 159/271 (58%), Gaps = 5/271 (1%)

Query: 31  AIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLP 90
           AIV  M+ V  N  +PVI L  GDP  F    T      A+ DS+ S  +N YAP  G  
Sbjct: 18  AIVDNMK-VKPNPEKPVIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGAL 76

Query: 91  LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES 150
            AR A+A Y   +    + ADD+ +  GC  A+E+ +  +   G  NIL+PRPG+P Y +
Sbjct: 77  SAREAIASYY-HNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQ-NILVPRPGFPLYRT 134

Query: 151 FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIA 210
            A+   IEV+ ++LLP++ WE+DL+ +E+L DE TAA+V+ NP NPCG+V + QHL++I 
Sbjct: 135 LAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALVVNNPSNPCGSVFSRQHLEEIL 194

Query: 211 ETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT 270
             A +  + +IADE+YG + F    + P+    S VP+++ G ++KRW+VPGWR GW+  
Sbjct: 195 AVAERQCLPIIADEIYGDMVFSGATFEPVASLSSNVPILSCGGLAKRWLVPGWRLGWIII 254

Query: 271 NDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
           +D  G+L    I   +        GP T++Q
Sbjct: 255 HDRRGIL--RDIRDGLVKLSQRILGPCTIVQ 283

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs [Energy metabolism, Amino acids and amines]. Length = 401

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score =  185 bits (471), Expect = 3e-56
 Identities = 74/226 (32%), Positives = 114/226 (50%), Gaps = 5/226 (2%)

Query: 48  IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK 107
           I L  G+P     F       +A+  +   +    Y P  GLP  R A+AE+L R     
Sbjct: 1   IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVD 56

Query: 108 LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE 167
           +  ++I +T G  EA+ ++L  +   G   +L+P P +P YE+ A+    EV    L  E
Sbjct: 57  VPPEEIVVTNGAQEALSLLLRALLNPGDE-VLVPDPTYPGYEAAARLAGAEVVPVPLDEE 115

Query: 168 RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG 227
            G+ +DLE +EA     T  + + NP NP G VL+ + L+++AE A+K GIL+I+DE Y 
Sbjct: 116 GGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYA 175

Query: 228 HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273
            L +   P   + +  +   VI L S SK + +PG R G+L     
Sbjct: 176 ELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE 221

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|185613 PTZ00433, PTZ00433, tyrosine aminotransferase; Provisional

 Score =  180 bits (459), Expect = 7e-54
 Identities = 84/239 (35%), Positives = 129/239 (53%), Gaps = 7/239 (2%)

Query: 44  PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD 103
           P+ +I L  GDP       T A+   A+V++V S   N Y P  G P AR AVA Y    
Sbjct: 32  PKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNS 91

Query: 104 LPYK------LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHI 157
             +K      +  D++ +  G   A+ + LT +   G  NIL+P PG+P YE+  K   I
Sbjct: 92  FVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGD-NILVPAPGFPHYETVCKAYGI 150

Query: 158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG 217
           E+R ++  PE+ WE DL+ +  L D+ T A+++ NP NPCG+  + +H++ I     +L 
Sbjct: 151 EMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELR 210

Query: 218 ILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGV 276
           + +I+DE+Y  + F    +  +  F + VP + LG  +K  +VPGWR GWL   DP+G 
Sbjct: 211 LPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN 269

Length = 412

>gnl|CDD|223513 COG0436, COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  163 bits (415), Expect = 2e-47
 Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 9/233 (3%)

Query: 44  PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD 103
              VI L  G+P     F T     +A ++++     + Y P  G+P  R A+AE   R 
Sbjct: 27  KEDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGTH-YTPSAGIPELREAIAEKYKRR 81

Query: 104 LPYKLSAD-DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHF 162
               +  + +I +T G  EA+ +    +   G   +L+P PG+P YE+  K    +    
Sbjct: 82  YGLDVDPEEEIIVTAGAKEALFLAFLALLNPGD-EVLIPDPGYPSYEAAVKLAGGKPVPV 140

Query: 163 DLL-PERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221
            L   E G++ DLE +EA     T AI++ +P NP G V + + L+ I E AR+  I++I
Sbjct: 141 PLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIII 200

Query: 222 ADEVYGHLAF-GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273
           +DE+Y  L + G+     + + G+    IT+ S SK + + GWR GW+     
Sbjct: 201 SDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPE 253

Length = 393

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score =  136 bits (345), Expect = 1e-37
 Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 11/236 (4%)

Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
              I LG  +          AVA+ A  D++     N Y P  GLP  R A+A++L R  
Sbjct: 1   TDKINLGSNEYL-GDSGTLPAVAK-AEKDALAGGTRNLYGPTDGLPELREALAKFLGRSP 58

Query: 105 PYKLSADDIYITLGCMEAVEIILTVITRLGAA---NILLPRPGWPFYESFAKRNHIEVRH 161
             KL  +   +      A   I  +I  L       IL+P P +P Y    +    EV  
Sbjct: 59  VLKLDREAAVVFGSG--AGANIEALIFLLRLNPGDAILVPAPTYPSYIRIFRLAGGEVVR 116

Query: 162 FDLLPERGWEVDLEAVEALADENTAAIVII---NPCNPCGNVLTYQHLQKIAETARKLGI 218
           + L     + +D +A+EA   E T    ++   +P NP G V T + L+K+ + A++  I
Sbjct: 117 YPLYSSNDFHLDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEELEKLLDLAKEHNI 176

Query: 219 LVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDP 273
           L++ DE Y    FGS   +      +    ++ +GS SK + + GWR G++  N  
Sbjct: 177 LLLVDEAYAGFVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAA 232

Length = 357

>gnl|CDD|235596 PRK05764, PRK05764, aspartate aminotransferase; Provisional

 Score =  127 bits (321), Expect = 9e-34
 Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 24/235 (10%)

Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
           R VI LG G+P     F T    ++A ++++       Y P  G+P  R A+A  L RD 
Sbjct: 31  RDVISLGAGEPD----FDTPEHIKEAAIEALDDG-KTKYTPAAGIPELREAIAAKLKRDN 85

Query: 105 PYKLSADDIYITLGCMEAV-EIILTVITRLGAAN----ILLPRPGWPFYESFAKRNHIEV 159
                   + +T G  +A+    + ++      +    +++P P W  Y    K      
Sbjct: 86  GLDYDPSQVIVTTGAKQALYNAFMALL------DPGDEVIIPAPYWVSYPEMVKLAGGVP 139

Query: 160 RHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGIL 219
                  E G+++ +E +EA     T A+++ +P NP G V + + L+ IA+ A +  I 
Sbjct: 140 VFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIW 199

Query: 220 VIADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKRWIVPGWRFGWLA 269
           V++DE+Y  L +    +  +    S+ P      IT+   SK + + GWR G+ A
Sbjct: 200 VLSDEIYEKLVYDGAEFTSI---ASLSPELRDRTITVNGFSKAYAMTGWRLGYAA 251

Length = 393

>gnl|CDD|181402 PRK08363, PRK08363, alanine aminotransferase; Validated

 Score =  123 bits (311), Expect = 1e-32
 Identities = 74/256 (28%), Positives = 122/256 (47%), Gaps = 6/256 (2%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106
           VI L  GDP  F  F+     ++A   +++    N Y P  GLP  R A+ +   R    
Sbjct: 32  VIRLNIGDPVKFD-FQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGV 89

Query: 107 KLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP 166
            ++ DD+ +T    EA+++I   +   G   IL+P P +P Y    K        +  + 
Sbjct: 90  DITPDDVRVTAAVTEALQLIFGALLDPGD-EILIPGPSYPPYTGLVKFYGGVPVEYRTIE 148

Query: 167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY 226
           E GW+ D++ +     E T AI +INP NP G +   + L++I + A +  + VI+DE+Y
Sbjct: 149 EEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIY 208

Query: 227 GHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSI 286
             + +    ++  G     VPVI +  +SK +   GWR G++   DP G L  + +  +I
Sbjct: 209 DLMTYEGK-HVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKL--AEVREAI 265

Query: 287 KACLGVRSGPSTLIQV 302
                +R  P+T  Q 
Sbjct: 266 DKLARIRLCPNTPAQF 281

Length = 398

>gnl|CDD|181036 PRK07568, PRK07568, aspartate aminotransferase; Provisional

 Score =  110 bits (278), Expect = 8e-28
 Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 4/190 (2%)

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
           Y+   G+P  R A A+Y  +     +  D+I IT G  EA+   +  I   G   IL+P 
Sbjct: 62  YSHSQGIPELREAFAKYYKK-WGIDVEPDEILITNGGSEAILFAMMAICDPGD-EILVPE 119

Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEV-DLEAVEALADENTAAIVIINPCNPCGNVL 201
           P +  Y  FA    +++       E G+ +   E +E L    T AI+I NP NP G V 
Sbjct: 120 PFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVY 179

Query: 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-VITLGSISKRWIV 260
           T + L+ +AE A+K  + +I+DEVY    +    Y        +   VI + S+SKR+  
Sbjct: 180 TKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSA 239

Query: 261 PGWRFGWLAT 270
            G R G L +
Sbjct: 240 CGARIGCLIS 249

Length = 397

>gnl|CDD|240391 PTZ00377, PTZ00377, alanine aminotransferase; Provisional

 Score =  109 bits (274), Expect = 8e-27
 Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 6/150 (4%)

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
           Y    G P  R+AVA ++ R         DI++T G    ++++L ++    +  +++P 
Sbjct: 111 YTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPI 170

Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNP 196
           P +P Y +       +   + L  E+GW +D E +E   ++         A+V+INP NP
Sbjct: 171 PQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNP 230

Query: 197 CGNVLTYQHLQKIAETARKLGILVIADEVY 226
            G VLT   +++I +   + GI+++ADEVY
Sbjct: 231 TGQVLTRDVMEEIIKFCYEKGIVLMADEVY 260

Length = 481

>gnl|CDD|180404 PRK06108, PRK06108, aspartate aminotransferase; Provisional

 Score =  101 bits (254), Expect = 2e-24
 Identities = 62/229 (27%), Positives = 94/229 (41%), Gaps = 17/229 (7%)

Query: 47  VIPL--GHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
           V+PL  G  D        T     DA   ++       Y    G+P  R A+A Y++R  
Sbjct: 26  VLPLWFGESDLP------TPDFIRDAAAAALADG-ETFYTHNLGIPELREALARYVSRLH 78

Query: 105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL 164
                 + I +T   ++A+ +    +   G   ++   P WP   +  K     V    L
Sbjct: 79  GVATPPERIAVTSSGVQALMLAAQALVGPGD-EVVAVTPLWPNLVAAPKILGARVVCVPL 137

Query: 165 LPE-RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223
                GW +DL+ + A     T A+ I +P NP G   +   L+ I    R+ G+ ++AD
Sbjct: 138 DFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVAD 197

Query: 224 EVYGHLAFGSTPYIPMGVFGSIVP----VITLGSISKRWIVPGWRFGWL 268
           EVY  L +      P   F  I      +I + S SK W + GWR GWL
Sbjct: 198 EVYERLYYAPGGRAPS--FLDIAEPDDRIIFVNSFSKNWAMTGWRLGWL 244

Length = 382

>gnl|CDD|236095 PRK07777, PRK07777, aminotransferase; Validated

 Score =  100 bits (250), Expect = 6e-24
 Identities = 71/222 (31%), Positives = 104/222 (46%), Gaps = 41/222 (18%)

Query: 65  AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD---DIYITLGCME 121
             A++AI   V     N Y P  G+P  R A+A    R   Y L  D   ++ +T+G  E
Sbjct: 44  EAAQEAIAGGV-----NQYPPGPGIPELRAAIAAQRRRR--YGLEYDPDTEVLVTVGATE 96

Query: 122 AVEIILTVITRLGAANIL-LPRPG------WPFYESFA--------KRNHIEVRHFDLLP 166
           A+           AA +L L  PG       P+Y+S+A         R  + +       
Sbjct: 97  AI-----------AAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVP----D 141

Query: 167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY 226
            RG+ +DL+A+ A     T A+++ +P NP G VLT   L  IAE A +  +LVI DEVY
Sbjct: 142 GRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVY 201

Query: 227 GHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGW 267
            HL F    ++P+    G     +T+ S +K + V GW+ GW
Sbjct: 202 EHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGW 243

Length = 387

>gnl|CDD|181738 PRK09265, PRK09265, aminotransferase AlaT; Validated

 Score = 98.3 bits (246), Expect = 3e-23
 Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 16/233 (6%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC--YAPMFGLPLARRAVAEYLNRDL 104
           ++ L  G+PA F  F     A D I+  V  ++     Y+   GL  AR+A+ +Y  +  
Sbjct: 35  ILKLNIGNPAPFG-FE----APDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKG 89

Query: 105 PYKLSADDIYITLGCMEAVEIILTVITRLGAAN----ILLPRPGWPFYESFAKRNHIEVR 160
              +  DDIYI  G  E     L V+      N    +L+P P +P + +    +  +  
Sbjct: 90  IPDVDVDDIYIGNGVSE-----LIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPV 144

Query: 161 HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220
           H+    E GW  DL+ + +     T AIVIINP NP G V + + L++I E AR+  +++
Sbjct: 145 HYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLII 204

Query: 221 IADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273
            ADE+Y  + +    +I +      +  +T   +SK + V G+R GW+  + P
Sbjct: 205 FADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGP 257

Length = 404

>gnl|CDD|237361 PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional

 Score = 98.3 bits (245), Expect = 6e-23
 Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 10/225 (4%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC--YAPMFGLPLARRAVAEYLN-RD 103
           ++ L  G+PA F  FRT     D +V  +   + +   Y+   GL  AR+A+ +Y   + 
Sbjct: 148 ILKLNIGNPAPFG-FRTP----DEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKG 202

Query: 104 LPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFD 163
           LP  +  DDIY   G  E + + ++ +   G   +L+P P +P + +          H+ 
Sbjct: 203 LP-NVDVDDIYTGNGVSELINLSMSALLDDGD-EVLIPSPDYPLWTACVNLAGGTAVHYR 260

Query: 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223
              +  W  D++ + +     T AIVIINP NP G +   + LQ+I + AR+  +++ +D
Sbjct: 261 CDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSD 320

Query: 224 EVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL 268
           E+Y  L      +  +      +  +T   +SK  ++ G+R GW+
Sbjct: 321 EIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWM 365

Length = 517

>gnl|CDD|235985 PRK07309, PRK07309, aromatic amino acid aminotransferase; Validated

 Score = 94.0 bits (234), Expect = 1e-21
 Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 21/197 (10%)

Query: 83  YAPMFGLPLARRAVAEYLNR--DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140
           Y  M GL   R+A A+++    +L Y    ++I +T+G  EA+   LT I   G   +LL
Sbjct: 63  YTGMAGLLELRQAAADFVKEKYNLDYA-PENEILVTIGATEALSASLTAILEPGDK-VLL 120

Query: 141 PRPGWPFYESFAKRNHIEV-------RHFDLLPERGWEVDLEAVEALADENTAAIVIINP 193
           P P +P YE        E+         F L PE      LE       +   A+++  P
Sbjct: 121 PAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEM-----LEKAILEQGDKLKAVILNYP 175

Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITL 251
            NP G   + + ++ +A+  +K  I VI+DEVY  L +   P++ +  +   +P   I +
Sbjct: 176 ANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY---LPDQTILI 232

Query: 252 GSISKRWIVPGWRFGWL 268
             +SK   + GWR G +
Sbjct: 233 NGLSKSHAMTGWRIGLI 249

Length = 391

>gnl|CDD|224089 COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

 Score = 93.2 bits (232), Expect = 2e-21
 Identities = 61/255 (23%), Positives = 98/255 (38%), Gaps = 10/255 (3%)

Query: 19  REREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAA--FPCFRTAAVAEDAIVDSVR 76
                     R  ++   +     D   VI    G P    FP           + +   
Sbjct: 63  GSAPPSGRPVRLELLKPSDPELLEDDPSVIDFAGGLPDPSLFPLEALRRALARVLRNYGA 122

Query: 77  SSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAA 136
           S     Y P  GLP  R A+A YL          + I IT G  +A++++L ++   G  
Sbjct: 123 SLALQ-YGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDT 181

Query: 137 NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPC-- 194
            +L+  P +P      +     V    +  + G   D EA+E    +     V + P   
Sbjct: 182 -VLVEDPTYPGALQALEALGARVIPVPVDED-GI--DPEALEEALAQWKPKAVYVTPTFQ 237

Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSI 254
           NP G  ++ +  + +   A K  +L+I D+ YG L +   P  P+    +   VI LGS 
Sbjct: 238 NPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSF 297

Query: 255 SKRWIVPGWRFGWLA 269
           SK  + PG R G++ 
Sbjct: 298 SKT-LAPGLRLGYVV 311

Length = 459

>gnl|CDD|180537 PRK06348, PRK06348, aspartate aminotransferase; Provisional

 Score = 89.8 bits (223), Expect = 2e-20
 Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 5/192 (2%)

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
           Y    G       + +Y +++       ++I  T+G    + + L  I   G   +++  
Sbjct: 62  YTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGD-EVIIHE 120

Query: 143 PGW-PFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201
           P + P+ +         +   +   E G++++++ +EAL    T AI++ +P NP G V 
Sbjct: 121 PYFTPYKDQIEMVGGKPI-ILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVF 179

Query: 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-VITLGSISKRWIV 260
           + + L++IA+ A +  + +I+DEVY   +F    ++PM     +    IT GS SK + +
Sbjct: 180 SKETLEEIAKIAIEYDLFIISDEVYDGFSF-YEDFVPMATLAGMPERTITFGSFSKDFAM 238

Query: 261 PGWRFGWLATND 272
            GWR G++   D
Sbjct: 239 TGWRIGYVIAPD 250

Length = 384

>gnl|CDD|235749 PRK06225, PRK06225, aspartate aminotransferase; Provisional

 Score = 87.9 bits (218), Expect = 1e-19
 Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 18/203 (8%)

Query: 68  EDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIIL 127
            +A++  +    +  Y P  G P  R  + + L       L  D+  IT G  E++ +++
Sbjct: 47  REAMIRCIEEGEYCKYPPPEGFPELRELILKDLG------LDDDEALITAGATESLYLVM 100

Query: 128 TVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL-PERGWEVDLEAVEALADENTA 186
                 G  N + P PG+   ++FA R   EV    +   E  +++  E V+   DENT 
Sbjct: 101 RAFLSPGD-NAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTR 159

Query: 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP---YIPMGVFG 243
            I +I+P NP G+  T + +++ AE AR     ++ D  Y   A   T    Y P     
Sbjct: 160 LIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEH--- 216

Query: 244 SIVPVITLGSISKRWIVPGWRFG 266
                +T  S SK + + G R G
Sbjct: 217 ----TVTSYSFSKIFGMAGLRIG 235

Length = 380

>gnl|CDD|180720 PRK06836, PRK06836, aspartate aminotransferase; Provisional

 Score = 86.0 bits (214), Expect = 5e-19
 Identities = 68/230 (29%), Positives = 105/230 (45%), Gaps = 29/230 (12%)

Query: 55  PAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIY 114
           PAA       A+ E  + +     +   Y P  G P  R A+AE LNR     L+AD I 
Sbjct: 48  PAAV----KEALRE--LAEEEDPGLHG-YMPNAGYPEVREAIAESLNRRFGTPLTADHIV 100

Query: 115 ITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNH----IEVRHFDLLPERGW 170
           +T G   A+ + L  I   G   +++  P +  Y  +   NH    + V          +
Sbjct: 101 MTCGAAGALNVALKAILNPG-DEVIVFAPYFVEYRFYVD-NHGGKLVVV----PTDTDTF 154

Query: 171 EVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIA----ETARKLG--ILVIADE 224
           + DL+A+EA     T A++I +P NP G V + + L+ +A    E +++ G  I +I+DE
Sbjct: 155 QPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDE 214

Query: 225 VYGHLAFGST--PYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272
            Y  + +     PYI      SIV    + S SK   +PG R G++A N 
Sbjct: 215 PYREIVYDGAEVPYIFKYYDNSIV----VYSFSKSLSLPGERIGYIAVNP 260

Length = 394

>gnl|CDD|235989 PRK07324, PRK07324, transaminase; Validated

 Score = 85.4 bits (212), Expect = 8e-19
 Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG 217
           EV ++ L  E GW  DL+ +  L   NT  I I N  NP G ++   +L++I E AR + 
Sbjct: 127 EVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVD 186

Query: 218 ILVIADEVYGHLAFGSTPYIPMGVFGSIVPV----ITLGSISKRWIVPGWRFGWLATN 271
             V++DEVY  L          G   SI  +    I+  S+SK + +PG R GW+A N
Sbjct: 187 AYVLSDEVYRPLDED-------GSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAAN 237

Length = 373

>gnl|CDD|215089 PLN00175, PLN00175, aminotransferase family protein; Provisional

 Score = 84.9 bits (210), Expect = 2e-18
 Identities = 71/237 (29%), Positives = 107/237 (45%), Gaps = 40/237 (16%)

Query: 48  IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK 107
           I LG G    FP F      ++A + ++R    N YA  FG+P    A+AE   +D    
Sbjct: 57  INLGQG----FPNFDGPDFVKEAAIQAIRDGK-NQYARGFGVPELNSAIAERFKKDTGLV 111

Query: 108 LSAD-DIYITLGCMEAVEIILTVITRLGAANIL-LPRPG------WPFYESF-------- 151
           +  + ++ +T GC EA+           AA IL L  PG       PFY+S+        
Sbjct: 112 VDPEKEVTVTSGCTEAI-----------AATILGLINPGDEVILFAPFYDSYEATLSMAG 160

Query: 152 AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
           AK   + +R  D      + V  + ++A     T AI+I  P NP G + T + L+ IA 
Sbjct: 161 AKIKTVTLRPPD------FAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIAS 214

Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGW 267
             ++  +L   DEVY  LAF    +I M    G     +T+ S+ K + + GW+ GW
Sbjct: 215 LCKENDVLAFTDEVYDKLAF-EGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGW 270

Length = 413

>gnl|CDD|180734 PRK06855, PRK06855, aminotransferase; Validated

 Score = 84.2 bits (209), Expect = 3e-18
 Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 13/200 (6%)

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
           Y P  G+   R  +AE  N+    +++ DDI    G  +A+  I  ++ R   A ++ P 
Sbjct: 69  YCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYGLLRR--EARVIGPS 126

Query: 143 PGWPFYESFAKRNHIEVRH--FDLLPERGWEVDLEAVEALADEN--TAAIVIINPCNPCG 198
           P +  + S A+  H       + L PE  W  DL+ +E     N   A I++INP NP G
Sbjct: 127 PAYSTHSS-AEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTG 185

Query: 199 NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG-VFGSIVPVITLGSISKR 257
            V   + L++I + AR+  + +I DE+Y ++ +     +P+  V G  VP I L  ISK 
Sbjct: 186 AVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGD-VPGIALKGISKE 244

Query: 258 WIVPGWRFGWL----ATNDP 273
              PG R GW+    A  D 
Sbjct: 245 LPWPGSRCGWIEVYNADKDE 264

Length = 433

>gnl|CDD|181580 PRK08912, PRK08912, hypothetical protein; Provisional

 Score = 82.3 bits (204), Expect = 1e-17
 Identities = 72/237 (30%), Positives = 105/237 (44%), Gaps = 37/237 (15%)

Query: 48  IPLGHG---DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
           I LG G   DP      R AA   DA++D       N Y PM GLP  R+AVA +  R  
Sbjct: 29  INLGQGFPDDPGPEDVRRAAA---DALLDG-----SNQYPPMMGLPELRQAVAAHYARF- 79

Query: 105 PYKLSAD---DIYITLGCMEAVEIILTVITRLGAANILLPRPG------WPFYESFA--- 152
              L  D   ++ +T G  EA          L AA + L  PG       P Y+++    
Sbjct: 80  -QGLDLDPETEVMVTSGATEA----------LAAALLALVEPGDEVVLFQPLYDAYLPLI 128

Query: 153 KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
           +R     R   L P   W +   A+ A     T A+++ NP NP G V   + L  +AE 
Sbjct: 129 RRAGGVPRLVRLEPPH-WRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEF 187

Query: 213 ARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWL 268
            ++   + I DEV+ H+ F    +IP M + G     + +GS  K + + GW+ G++
Sbjct: 188 CQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFV 244

Length = 387

>gnl|CDD|236075 PRK07683, PRK07683, aminotransferase A; Validated

 Score = 81.3 bits (201), Expect = 2e-17
 Identities = 63/229 (27%), Positives = 97/229 (42%), Gaps = 20/229 (8%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR--DL 104
           +I L  G P           A+ AI ++     +  Y    GL   R+A   ++    DL
Sbjct: 30  LISLTIGQPDFPTPSHVKEAAKRAITEN-----YTSYTHNAGLLELRKAACNFVKDKYDL 84

Query: 105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF-----AKRNHIEV 159
            Y     +I +T+G  EA++I    I   G   ++LP P +P YE       AK   I+ 
Sbjct: 85  HYS-PESEIIVTIGASEAIDIAFRTILEPGT-EVILPAPIYPGYEPIIRLCGAKPVFIDT 142

Query: 160 RHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGIL 219
           R        G+ +  EA+E    E T  +V+  P NP G  L+ + LQ IA+  +   I 
Sbjct: 143 R------STGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIF 196

Query: 220 VIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL 268
           V++DE+Y  L +                 I +  +SK   + GWR G+L
Sbjct: 197 VLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFL 245

Length = 387

>gnl|CDD|224090 COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

 Score = 81.6 bits (202), Expect = 2e-17
 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 7/174 (4%)

Query: 94  RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGW-PFYESFA 152
            A+A +  +   +++  + I    G +  + + +  +T+ G   +++  P + PFY    
Sbjct: 67  AAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDG-VVIQTPVYPPFYN-AI 124

Query: 153 KRNHIEVRHFDLLPE-RGWEVDLEAVE-ALADENTAAIVIINPCNPCGNVLTYQHLQKIA 210
           K N  +V    L+ +   +E+D +A+E A  DE     ++ NP NP G V T + L+KIA
Sbjct: 125 KLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIA 184

Query: 211 ETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIVPG 262
           E   + G+ VI+DE++  L  G   +IP            ITL S SK + + G
Sbjct: 185 ELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAG 238

Length = 388

>gnl|CDD|181082 PRK07682, PRK07682, hypothetical protein; Validated

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 9/225 (4%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106
           VI LG G+P     F T     +A + S+    +  Y    GL   R+ +A+YL +    
Sbjct: 22  VISLGVGEPD----FVTPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAV 76

Query: 107 KLSADD-IYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL 165
               +D I +T+G  +A+++ +  I   G   +L+  P +  Y                 
Sbjct: 77  SYDPNDEIIVTVGASQALDVAMRAIINPGD-EVLIVEPSFVSYAPLVTLAGGVPVPVATT 135

Query: 166 PERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEV 225
            E  ++V    +EA     T AI++ +P NP G VL    L++IA    K  ++V++DE+
Sbjct: 136 LENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEI 195

Query: 226 YGHLAFGSTPYIPMG-VFGSIVPVITLGSISKRWIVPGWRFGWLA 269
           Y  L +    Y     + G     I +   SK + + GWR G++A
Sbjct: 196 YAELTY-DEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIA 239

Length = 378

>gnl|CDD|223157 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

 Score = 77.7 bits (192), Expect = 4e-16
 Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 14/187 (7%)

Query: 85  PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPG 144
           P       R A+AEY        +  +++ +  G  E +E+++      G   +L+P P 
Sbjct: 55  PDPDYRELRAALAEYYG-----VVDPENVLVGNGSDELIELLVRAFVEPGDT-VLIPEPT 108

Query: 145 WPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204
           +  YE  A+    EV      P + + +DL+A+ A   + T  + + NP NP G +L  +
Sbjct: 109 FSMYEIAAQLAGAEVVKV---PLKEFRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPRE 165

Query: 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR 264
            L+ + E   + G++VI DE Y    F     + +  +     +I L + SK + + G R
Sbjct: 166 ELRALLEALPEGGLVVI-DEAYIE--FSPESSLELLKYPP--NLIVLRTFSKAFGLAGLR 220

Query: 265 FGWLATN 271
            G+   N
Sbjct: 221 VGYAIAN 227

Length = 356

>gnl|CDD|236248 PRK08361, PRK08361, aspartate aminotransferase; Provisional

 Score = 77.2 bits (190), Expect = 6e-16
 Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 13/241 (5%)

Query: 29  RYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFG 88
           R  I  L E   K +   VI LG G+P     F T    ++A   ++    +  Y P  G
Sbjct: 19  RSKIRELFERASKMEN--VISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAG 71

Query: 89  LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY 148
           +P  R A+AEY  +     +  D++ +T G  EA  +    +   G   +++P P +  Y
Sbjct: 72  IPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGD-EVIIPDPAFVCY 130

Query: 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQK 208
              AK    +     L  E  ++ D + +  L  + T  IVI  P NP G  L  +  + 
Sbjct: 131 VEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKA 190

Query: 209 IAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIVPGWRFG 266
           IA+ A    I +++DE Y H  +    + PM  +    P   I   S SK + + GWR G
Sbjct: 191 IADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA---PDNTILANSFSKTFAMTGWRLG 247

Query: 267 W 267
           +
Sbjct: 248 F 248

Length = 391

>gnl|CDD|181642 PRK09082, PRK09082, methionine aminotransferase; Validated

 Score = 76.9 bits (190), Expect = 8e-16
 Identities = 54/196 (27%), Positives = 80/196 (40%), Gaps = 30/196 (15%)

Query: 48  IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM---FNCYAPMFGLPLARRAVAEYLNRDL 104
           I L  G    FP F         +V+++  +M    N Y PM G+   R A+A    R  
Sbjct: 33  INLSQG----FPDFD----GPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLY 84

Query: 105 PYKLSAD-DIYITLGCMEAVEIILTVIT---RLGAANILLPRPGWPFYESFAKRNHIE-- 158
             +  AD +I +T G  EA   +   I    R G   I+      P Y+S+A    IE  
Sbjct: 85  GRQYDADSEITVTAGATEA---LFAAILALVRPGDEVIVFD----PSYDSYAP--AIELA 135

Query: 159 ---VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK 215
                   L P   + VD +   A     T  I++  P NP G V +   ++ + +    
Sbjct: 136 GGRAVRVALQPP-DFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAG 194

Query: 216 LGILVIADEVYGHLAF 231
             I V++DEVY H+ F
Sbjct: 195 TDIYVLSDEVYEHIVF 210

Length = 386

>gnl|CDD|234249 TIGR03538, DapC_gpp, succinyldiaminopimelate transaminase

 Score = 76.3 bits (188), Expect = 1e-15
 Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 21/248 (8%)

Query: 35  LMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARR 94
           L+  V     +P I L  G+P       T A   +A+ +++     + Y    GLP  R+
Sbjct: 18  LLAGVTPPASKPPIALSIGEPK----HPTPAFVLEALRENL--HGLSTYPTTKGLPELRQ 71

Query: 95  AVAEYLNR--DLPYKLSADD-IYITLGCMEAV-EIILTVITRLGAANILLPRPGWPFYES 150
           A+A +L R  DLP  +  +  +    G  EA+      VI    A  +++P P +  YE 
Sbjct: 72  AIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEG 131

Query: 151 FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIA 210
            A     E    +   E G+  D +AV          + + +P NP G VL+   L+K+ 
Sbjct: 132 AALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLI 191

Query: 211 ETARKLGILVIADEVYGHLAF-GSTPYIPMGVF--------GSIVPVITLGSISKRWIVP 261
           E A + G ++ +DE Y  L F    P  P G+               +   S+SKR  +P
Sbjct: 192 ELADQYGFIIASDECYSELYFDEGNP--PAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLP 249

Query: 262 GWRFGWLA 269
           G R G++A
Sbjct: 250 GLRSGFVA 257

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 393

>gnl|CDD|181026 PRK07550, PRK07550, hypothetical protein; Provisional

 Score = 73.8 bits (182), Expect = 9e-15
 Identities = 60/202 (29%), Positives = 87/202 (43%), Gaps = 28/202 (13%)

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAA-NILLP 141
           Y P+ GLP  R A A + +R     +S + ++IT GC +A      ++T  GA   ++LP
Sbjct: 63  YGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQA--FWAAMVTLAGAGDEVILP 120

Query: 142 RPGWPFYESFAKRNH--------IEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP 193
            P W F       NH        I   +       G   D  A EAL    T AI ++ P
Sbjct: 121 LP-WYF-------NHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTP 172

Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-----V 248
            NP G V   + L ++ + AR+ GI +I DE Y     G     P  +F    P     +
Sbjct: 173 NNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGA--PHDLFAD--PDWDDTL 228

Query: 249 ITLGSISKRWIVPGWRFGWLAT 270
           + L S SK + + G R G +  
Sbjct: 229 VHLYSFSKSYALTGHRVGAVVA 250

Length = 386

>gnl|CDD|177996 PLN02368, PLN02368, alanine transaminase

 Score = 73.7 bits (181), Expect = 1e-14
 Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 31/290 (10%)

Query: 44  PRPVIPLGHG-----DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAE 98
           PR V+ L        DP     F   A+A      S+ S     Y+   GLP  R+ VAE
Sbjct: 59  PRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAE 118

Query: 99  YLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE-SFAKRNHI 157
           ++ R   Y    + I++T G  + V  IL  + R     +L+P P +P Y  + +     
Sbjct: 119 FIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGT 178

Query: 158 EVRHFDLLPERGWEVDLEAVEALADENTA------AIVIINPCNPCGNVLTYQHLQKIAE 211
            V ++ L     W +D+  +     +  +      A+VIINP NP G  L+  +L++I +
Sbjct: 179 LVPYY-LEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILK 237

Query: 212 TARKLGILVIADEVYGHLAF-GSTPYIP-------MGV-FGSIVPVITLGSISK-RWIVP 261
              +  ++++ DEVY    +    P+I        MG      V +++  ++SK  W   
Sbjct: 238 FCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGEC 297

Query: 262 GWRFGWLA-TNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310
           G R G+   TN P   +++   V SI         P+   Q+  M L+VN
Sbjct: 298 GQRGGYFEMTNIPPKTVEEIYKVASIAL------SPNVSGQIF-MGLMVN 340

Length = 407

>gnl|CDD|180937 PRK07337, PRK07337, aminotransferase; Validated

 Score = 70.9 bits (174), Expect = 7e-14
 Identities = 59/226 (26%), Positives = 96/226 (42%), Gaps = 9/226 (3%)

Query: 43  DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR 102
             R +I +G G+P     F       +A   ++R  +   Y    GL   R A+A +  R
Sbjct: 28  AGRDIIHMGIGEPD----FTAPEPVVEAAARALRRGVTQ-YTSALGLAPLREAIAAWYAR 82

Query: 103 DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHF 162
                ++ + I +T G   A+ +    +   G   +L+P P +P    F           
Sbjct: 83  RFGLDVAPERIVVTAGASAALLLACLALVERGD-EVLMPDPSYPCNRHFVAAAEGRPVLV 141

Query: 163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA 222
              P   +++    VEA   E T  +++ +P NP G  +    L++I E  R  G   I 
Sbjct: 142 PSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIV 201

Query: 223 DEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL 268
           DE+Y  L++ + P   +   G    VIT+ S SK + + GWR GWL
Sbjct: 202 DEIYQGLSYDAAPVSALS-LGD--DVITINSFSKYFNMTGWRLGWL 244

Length = 388

>gnl|CDD|188462 TIGR03947, viomycin_VioD, capreomycidine synthase

 Score = 70.6 bits (173), Expect = 9e-14
 Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 3/155 (1%)

Query: 113 IYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEV 172
           +  T G  EA+ ++LT + R G   +++  P +      A     EVR + LL  RG+  
Sbjct: 72  VMTTHGSSEAIYLVLTALLRPGD-EVVVVDPAYHSLSHLAVATGCEVRPWPLLAVRGFRP 130

Query: 173 DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
           DL+A+ AL    T A+V+  P NP G  +T + L ++ E A + G +++ D  +  L   
Sbjct: 131 DLDALRALLTPRTRAVVVNFPHNPTGASVTPRELDELLERAARSGAVLLWDNAFADLVHD 190

Query: 233 STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
           + P            VI+ G++SK + +PG R GW
Sbjct: 191 APPLPDPSALYD--RVISFGTLSKAFGLPGLRVGW 223

Members of this family are the enzyme capreomycidine synthase, which performs the second of two steps in the biosynthesis of 2S,3R-capreomycidine from arginine. Capreomycidine is an unusual amino acid used by non-ribosomal peptide synthases (NRPS) to make the tuberactinomycin class of peptide antibiotic. The best characterized member is VioD from the biosynthetic pathway for viomycin [Cellular processes, Biosynthesis of natural products]. Length = 359

>gnl|CDD|236517 PRK09440, avtA, valine--pyruvate transaminase; Provisional

 Score = 69.5 bits (171), Expect = 3e-13
 Identities = 66/220 (30%), Positives = 93/220 (42%), Gaps = 37/220 (16%)

Query: 32  IVSLMESVDKNDPR---PVIPLGHGDPAAFP----CFR--TAAVAEDAIVDSVRSSMFNC 82
           I  LM+  D ND       I LG G+PA  P     FR   A +        +  ++ N 
Sbjct: 16  ITQLMD--DLNDGLRTPGAIMLGGGNPAHIPEMEDYFRDLLADLLAS---GKLTEALGN- 69

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAAN----I 138
           Y    G      A+A  LN    + +S  +I +T G   A   +  +     A      I
Sbjct: 70  YDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKI 129

Query: 139 LLP-RPGWPFY-------ESF-AKRNHIEVRHFDLLPER--GWEVDLEAVEALADENTAA 187
           L P  P +  Y       + F + R +IE     LLPE    + VD E +    DE+T A
Sbjct: 130 LFPLAPEYIGYADAGLEEDLFVSYRPNIE-----LLPEGQFKYHVDFEHLHI--DEDTGA 182

Query: 188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG 227
           I +  P NP GNVLT + L+K+   AR+  I ++ D  YG
Sbjct: 183 ICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYG 222

Length = 416

>gnl|CDD|213963 TIGR04350, C_S_lyase_PatB, putative C-S lyase

 Score = 69.3 bits (170), Expect = 3e-13
 Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 85  PMFGLPL----ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140
           P+FG  L       AV  +L +   +++  + I    G + ++   +  +T  G   I+ 
Sbjct: 54  PVFGYTLPPDSLYAAVINWLAQRHGWQIDPEWIVFLPGVVPSLFAAVRALTAPGEGVIVQ 113

Query: 141 PRPGWPFYESFAKRNHIEVRHFDLLP-ERGWEVDLEAVEALADENTAAIVIINPCNPCGN 199
             P +P + S  K N  E+    L      +  DLE +E    E    +++ +P NP G 
Sbjct: 114 T-PVYPPFLSAVKSNGRELVLNPLKLDPGRYRFDLEDLEDAITEKARLLLLCSPHNPVGR 172

Query: 200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSI 254
           V T + L ++AE   +  ++V++DE++  L +    +IP     S+ P      +TL S 
Sbjct: 173 VWTREELTRLAELCLRHNVVVVSDEIHADLVYPPNKHIP---LASLSPEIAERTVTLLSP 229

Query: 255 SKRWIVPGWRFGWLATNDP 273
            K + + G    +    +P
Sbjct: 230 GKTFNIAGLNISFAIIPNP 248

Members of this subfamily are probable C-S lyases from a family of pyridoxal phosphate-dependent enzymes that tend to be (mis)annotated as probable aminotransferases. One member is PatB of Bacillus subtilis, a proven C-S-lyase. Another is the virulence factor cystalysin from Treponema denticola, whose hemolysin activity may stem from H2S production. Members of the seed alignment occur next to examples of the enzyme 5-histidylcysteine sulfoxide synthase, from ovothiol A biosynthesis, and would be expected to perform a C-S cleavage of 5-histidylcysteine sulfoxide to leave 1-methyl-4-mercaptohistidine (ovothiol A). Length = 384

>gnl|CDD|234250 TIGR03540, DapC_direct, LL-diaminopimelate aminotransferase

 Score = 69.0 bits (169), Expect = 3e-13
 Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 15/231 (6%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106
           VI LG GDP   P   T     +A+  +  +   + Y    G+   R+AVA++  R    
Sbjct: 31  VISLGIGDPD-LP---TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGV 86

Query: 107 KLSADDIYITL-GCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL 165
           +L  +   ++L G  E +  I       G   +L+P PG+P Y         E     L 
Sbjct: 87  ELDPETEVLSLIGSKEGIAHIPLAFVNPGDI-VLVPDPGYPVYRIGTLFAGGEPYEMPLK 145

Query: 166 PERGWEVDLEAVEALADENTAA---IVIIN-PCNPCGNVLTYQHLQKIAETARKLGILVI 221
            E G+  D +A+     E+ A    ++ IN P NP G V   +  +++ E A++  I+V 
Sbjct: 146 EENGFLPDFDAI----PEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVC 201

Query: 222 ADEVYGHLAF-GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271
            D  Y  + F G      + V G+    I   S+SK + + GWR G    N
Sbjct: 202 HDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGN 252

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia and the clade containing the Chlamydia gene is a neighboring one in the same pfam00155 superfamily so it seems quite reasonable that these enzymes catalyze the same transformation. Length = 383

>gnl|CDD|233290 TIGR01141, hisC, histidinol-phosphate aminotransferase

 Score = 68.4 bits (168), Expect = 4e-13
 Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 27/187 (14%)

Query: 93  RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA 152
           ++A+A+Y        +  + I +  G  E +E+++      G A +L+P P +  YE  A
Sbjct: 60  KQALADYYG------VDPEQILLGNGSDEIIELLIRAFLEPGDA-VLVPPPTYSMYEISA 112

Query: 153 KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
           K +  EV    L  +   ++DLE +    D+    + + +P NP GN+L+   ++ + E 
Sbjct: 113 KIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLER 170

Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-------VITLGSISKRWIVPGWRF 265
             +  ++V+ DE YG   F   P        S +P       +I L ++SK + + G R 
Sbjct: 171 TPEDALVVV-DEAYGE--FSGEP--------STLPLLAEYPNLIVLRTLSKAFGLAGLRI 219

Query: 266 GWLATND 272
           G+   N 
Sbjct: 220 GYAIANA 226

Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme [Amino acid biosynthesis, Histidine family]. Length = 346

>gnl|CDD|181595 PRK08960, PRK08960, hypothetical protein; Provisional

 Score = 68.2 bits (167), Expect = 7e-13
 Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 4/186 (2%)

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
           Y    GLP  R A+A +  +     +  + I +T G   A+ +  +++   G    LL  
Sbjct: 65  YTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKH-WLLAD 123

Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
           PG+P    F +      +   + P+  +++    VE   + +T   ++ +P NP G +L+
Sbjct: 124 PGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLS 183

Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG 262
              L  +++  R  G  ++ DE+Y  L +G      + V         L S SK + + G
Sbjct: 184 RDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAF---VLNSFSKYFGMTG 240

Query: 263 WRFGWL 268
           WR GWL
Sbjct: 241 WRLGWL 246

Length = 387

>gnl|CDD|224365 COG1448, TyrB, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 19/209 (9%)

Query: 31  AIVSLMESVDKNDPRP-VIPLGHG----DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP 85
            I+ L E+  K DPRP  + LG G    +    P  R    AE  +++  ++     Y P
Sbjct: 12  PILGLKEAF-KADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKN---YLP 67

Query: 86  MFGLPLARRAVAEYLNRDLPYKLSADDIYI--TLGCMEAVEIILTVITR-LGAANILLPR 142
           + GLP    AV + L       L+ D +    TLG   A+ +    + R    A + +  
Sbjct: 68  IEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISD 127

Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA---IVIINPC--NPC 197
           P WP +++  +   +EV  +         +D + +  LAD  TA    +V+++ C  NP 
Sbjct: 128 PTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGM--LADLKTAPEGSVVLLHGCCHNPT 185

Query: 198 GNVLTYQHLQKIAETARKLGILVIADEVY 226
           G   T +  Q++A+  ++ G++   D  Y
Sbjct: 186 GIDPTEEQWQELADLIKERGLIPFFDIAY 214

Length = 396

>gnl|CDD|226485 COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

 Score = 65.9 bits (161), Expect = 4e-12
 Identities = 76/264 (28%), Positives = 111/264 (42%), Gaps = 38/264 (14%)

Query: 32  IVSLMESVDKNDPRP-VIPLGHGDPAAFP----CFRTAAVAEDAIVDSVRSSMFNCYAPM 86
           I  LM+ ++     P  I LG G+PA  P     F+   +AE         ++ N   P 
Sbjct: 16  ITQLMDDLNDGLRTPGAIMLGGGNPARIPEMDDYFQDL-LAEMLASGKATEALCNYDGPQ 74

Query: 87  FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI---TRLGAAN-ILLPR 142
               L   A+A+ L R+  + ++A +I +T G   A   +  +       G    ILLP 
Sbjct: 75  GKAVLID-ALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPL 133

Query: 143 PGWPFYESFAKRNHIEVRHF-------DLLPER--GWEVDLEAVEALADENTAAIVIINP 193
              P Y  +A    +E   F       +LLP     + VD E +     E+T AI +  P
Sbjct: 134 A--PEYIGYAD-AGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHI--GESTGAICVSRP 188

Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-----V 248
            NP GNVLT + L K+   AR+ GI +I D  YG          P  +F    P     +
Sbjct: 189 TNPTGNVLTDEELAKLDALARQHGIPLIIDNAYG-------VPFPGIIFSDATPLWNENI 241

Query: 249 ITLGSISKRWIVPGWRFGWLATND 272
           I   S+SK  + PG R G +  N+
Sbjct: 242 ILCMSLSKLGL-PGSRCGIIIANE 264

Length = 417

>gnl|CDD|235654 PRK05957, PRK05957, aspartate aminotransferase; Provisional

 Score = 65.5 bits (160), Expect = 5e-12
 Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 21/206 (10%)

Query: 81  NCYAPMFGLPLARRAVAEYLNRDLPYKLSADD-IYITLGC-MEAVEIILTVITRLGAANI 138
           + Y  + G+P    A+ + L +D   +L+ +  I +T G  M  +  IL  IT  G   I
Sbjct: 59  HKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAIL-AITDPGDEII 117

Query: 139 LLPRPGWPFYESFAKRNH-IEVRHFDLLP-----ERGWEVDLEAVEALADENTAAIVIIN 192
           L      P+Y  F   NH + +      P     +  +++  EA+E      T AIV I+
Sbjct: 118 LNT----PYY--F---NHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTIS 168

Query: 193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI-PMGVFGSIVPVITL 251
           P NP G V     L+ + +   + GI  I+DE Y +  +    +  P  + GS    I+L
Sbjct: 169 PNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISL 228

Query: 252 GSISKRWIVPGWRFGWLATNDPNGVL 277
            S+SK +    WR G++    P  +L
Sbjct: 229 YSLSKAYGFASWRIGYMVI--PIHLL 252

Length = 389

>gnl|CDD|163313 TIGR03537, DapC, succinyldiaminopimelate transaminase

 Score = 65.3 bits (159), Expect = 5e-12
 Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 9/192 (4%)

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAVEIILTVITRLGAA----N 137
           Y    G    R A++ +  R    KL  D  +  + G  EA  I    +  +        
Sbjct: 32  YPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEA--IFHFPLVFIDPEEDRRR 89

Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC 197
           ++   PG+P YE  A     E     L  E G+ + LE VE    E T  + I  P NP 
Sbjct: 90  VIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPT 149

Query: 198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR 257
           G      +L++     R+ GI++ +DE Y  + FG  P+  + V   I  V+   S+SKR
Sbjct: 150 GATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEV--GIENVLAFHSLSKR 207

Query: 258 WIVPGWRFGWLA 269
             + G+R G++A
Sbjct: 208 SGMTGYRSGFVA 219

The four sequences which make up the seed for this model are not closely related, although they are all members of the pfam00155 family of aminotransferases and are more closely related to each other than to anything else. Additionally, all of them are found in the vicinity of genes involved in the biosynthesis of lysine via the diaminopimelate pathway (GenProp0125), although this amount to a separation of 12 genes in the case of Sulfurihydrogenibium azorense Az-Fu1. None of these genomes contain another strong candidate for this role in the pathway. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade. Length = 350

>gnl|CDD|177876 PLN02231, PLN02231, alanine transaminase

 Score = 64.6 bits (157), Expect = 1e-11
 Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 26/206 (12%)

Query: 71  IVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI 130
           I+D +       Y+   G+   R A+A  +     +    +DI++T G   AV +++ ++
Sbjct: 152 ILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL 211

Query: 131 TRLGAANILLPRPGWPFYE-SFAKRNHIEVRHFDLLPERGWEVDL-EAVEALADENTA-- 186
            R     IL P P +P Y  S A      V ++ L    GW +++ E  + L D  +   
Sbjct: 212 IRSEKDGILCPIPQYPLYSASIALHGGTLVPYY-LDEATGWGLEISELKKQLEDARSKGI 270

Query: 187 ---AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243
              A+V+INP NP G VL  ++ + I E  ++ G++++ADEVY         Y+P   F 
Sbjct: 271 TVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQE-----NVYVPDKKFH 325

Query: 244 SI-------------VPVITLGSISK 256
           S              + +++  S+SK
Sbjct: 326 SFKKVARSMGYGEKDISLVSFQSVSK 351

Length = 534

>gnl|CDD|132578 TIGR03539, DapC_actino, succinyldiaminopimelate transaminase

 Score = 62.1 bits (151), Expect = 6e-11
 Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 18/192 (9%)

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYK-LSADDIYITLGCMEAVEIILTVITRLGAAN-ILL 140
           Y   +G P  R A+ ++L R      L    +   +G  E V  + T++  LG  + +++
Sbjct: 52  YPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLG-LGPGDTVVI 110

Query: 141 PRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV 200
           P   +P YE  A          D   E            L       I + +P NP G V
Sbjct: 111 PELAYPTYEVGALLAGATPVAADDPTE------------LDPVGPDLIWLNSPGNPTGRV 158

Query: 201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI---PMGVFGSIVPVITLGSISKR 257
           L+   L+ I   AR+ G +V +DE Y  L +   P     P    G    ++ + S+SKR
Sbjct: 159 LSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKR 218

Query: 258 WIVPGWRFGWLA 269
             + G+R G++A
Sbjct: 219 SNLAGYRAGFVA 230

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 357

>gnl|CDD|183514 PRK12414, PRK12414, putative aminotransferase; Provisional

 Score = 61.3 bits (149), Expect = 1e-10
 Identities = 62/234 (26%), Positives = 95/234 (40%), Gaps = 33/234 (14%)

Query: 48  IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM---FNCYAPMFGLPLARRAVAEYLNRDL 104
           + L  G P  F         + A+V+ V  +M    N YAPM G+   R A+AE   R  
Sbjct: 32  LNLSQGAPN-FAP-------DPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLY 83

Query: 105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPG------WPFYESFA---KRN 155
             +               V +I +    L AA   L  PG       P ++S+A   +  
Sbjct: 84  GARYDPA---------SEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQ 134

Query: 156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK 215
                   L PE  + V+ + V A     T  I++  P NP   V +   L ++A+  R 
Sbjct: 135 GATPVAIKLSPE-DFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRN 193

Query: 216 LGILVIADEVYGHLAFGSTPYIPMGVFGSIV--PVITLGSISKRWIVPGWRFGW 267
             I++++DEVY H+ F    +  M     +    VI + S  K + V GWR G+
Sbjct: 194 TDIVILSDEVYEHVVFDGARHHSMARHRELAERSVI-VSSFGKSYHVTGWRVGY 246

Length = 384

>gnl|CDD|180542 PRK06358, PRK06358, threonine-phosphate decarboxylase; Provisional

 Score = 59.2 bits (144), Expect = 6e-10
 Identities = 38/182 (20%), Positives = 80/182 (43%), Gaps = 10/182 (5%)

Query: 93  RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA 152
           R+ +A +       +L  +++ +  G   A E+I  ++       +L+  P +  YE   
Sbjct: 60  RKRIASF------EQLDLENVILGNG---ATELIFNIVKVTKPKKVLILAPTFAEYERAL 110

Query: 153 KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
           K    E+ + +L  E  +  + E V     E    + + NP NP G +++ + ++KI + 
Sbjct: 111 KAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKILDK 169

Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272
             K  I +I DE +      +     +    +   +I + + +K + +PG R G+  T++
Sbjct: 170 CEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN 229

Query: 273 PN 274
            N
Sbjct: 230 KN 231

Length = 354

>gnl|CDD|235772 PRK06290, PRK06290, aspartate aminotransferase; Provisional

 Score = 59.3 bits (144), Expect = 6e-10
 Identities = 35/130 (26%), Positives = 63/130 (48%)

Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
           PG+P   +  K    EV +  LL E  +  DL+++     E    + +  P NP G V T
Sbjct: 138 PGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVAT 197

Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG 262
            +  +++ + A++  I+V+ D  Y  L F   P   + V G+    + + S+SK + + G
Sbjct: 198 KEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTG 257

Query: 263 WRFGWLATND 272
           WR  ++  N+
Sbjct: 258 WRLAFVVGNE 267

Length = 410

>gnl|CDD|167650 PRK03967, PRK03967, histidinol-phosphate aminotransferase; Provisional

 Score = 58.6 bits (142), Expect = 7e-10
 Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 21/202 (10%)

Query: 71  IVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI 130
           I + ++   FN Y P       R A+AE+        L A++I +  G  E +  ++ + 
Sbjct: 40  IFEELKRVPFNRY-PHITSDPLREAIAEFYG------LDAENIAVGNGSDELISYLVKLF 92

Query: 131 TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVI 190
                 +I++  P +  Y  +AK N I V    L  +  + +D E +   A  N +A+ I
Sbjct: 93  E---GKHIVITPPTFGMYSFYAKLNGIPVIDVPL--KEDFTIDGERIAEKAK-NASAVFI 146

Query: 191 INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT 250
            +P NP GN+   + + K+ ET    G  V+ DE Y   +  S     +G+      +I 
Sbjct: 147 CSPNNPTGNLQPEEEILKVLET----GKPVVLDEAYAEFSGKSL----IGLIDEYPNLIL 198

Query: 251 LGSISKRWIVPGWRFGWLATND 272
           L + SK + + G R G+   N+
Sbjct: 199 LRTFSKAFGLAGIRAGYAIANE 220

Length = 337

>gnl|CDD|236393 PRK09147, PRK09147, succinyldiaminopimelate transaminase; Provisional

 Score = 59.1 bits (144), Expect = 8e-10
 Identities = 68/248 (27%), Positives = 102/248 (41%), Gaps = 21/248 (8%)

Query: 35  LMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARR 94
           L   V      P I L  G+P       T A  +DA+  ++       Y    GLP  R 
Sbjct: 19  LFAGVTPPADLPPISLSIGEPK----HPTPAFIKDALAANLDG--LASYPTTAGLPALRE 72

Query: 95  AVAEYLNR--DLPYKLSADDIYITLGCMEAV-EIILTVITRLGA-ANILLPRPGWPFYES 150
           A+A +L R   LP    A  +    G  EA+     TVI R G    ++ P P +  YE 
Sbjct: 73  AIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEG 132

Query: 151 FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIA 210
            A     E    +  P   +  D +AV A     T  + + +P NP G VL     +K+ 
Sbjct: 133 AALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLF 192

Query: 211 ETARKLGILVIADEVYGHLAF-GSTPYIPMGVF--------GSIVPVITLGSISKRWIVP 261
             + + G ++ +DE Y  + F  + P  P+G+              ++   S+SKR  VP
Sbjct: 193 ALSDRYGFVIASDECYSEIYFDEAAP--PLGLLEAAAELGRDDFKRLVVFHSLSKRSNVP 250

Query: 262 GWRFGWLA 269
           G R G++A
Sbjct: 251 GLRSGFVA 258

Length = 396

>gnl|CDD|180403 PRK06107, PRK06107, aspartate aminotransferase; Provisional

 Score = 59.0 bits (143), Expect = 8e-10
 Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 12/198 (6%)

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGA-ANILLP 141
           Y  + G P  R+A+   L R      + ++I +  G  +A  I L ++  L A   +++P
Sbjct: 66  YTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQA--IFLALMATLEAGDEVIIP 123

Query: 142 RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL 201
            P W  Y      N           E+G+++  EA+EA     T  +++  P NP G V 
Sbjct: 124 APYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVY 183

Query: 202 TYQHLQKIAET-ARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSIS 255
           +   L+ +A+   R   +LV+ D++Y H+ F      P     +  P     V+    +S
Sbjct: 184 SRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE---PTPHLLAAAPELRDRVLVTNGVS 240

Query: 256 KRWIVPGWRFGWLATNDP 273
           K + + GWR G+ A    
Sbjct: 241 KTYAMTGWRIGYAAGPAD 258

Length = 402

>gnl|CDD|181749 PRK09276, PRK09276, LL-diaminopimelate aminotransferase; Provisional

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 53/250 (21%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC----YAPMFGLPLARRAVAEYLNR 102
           VI LG GDP   P         D I++++  ++ +     Y    G+   R+AVA++  R
Sbjct: 33  VISLGIGDPD-LP-------TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKR 84

Query: 103 DLPYKLSADDIYITL-GCMEAVEIILTVITRLGAANI-----------LLPRPGWPFYES 150
               +L  +   I+L G  E +            A+I           L+P PG+P Y+ 
Sbjct: 85  RFGVELDPETEVISLIGSKEGI------------AHIPLAFVNPGDVVLVPDPGYPVYKI 132

Query: 151 FAKRNHIEVRHFDLLPERGWEVDLEAV-EALADENTAAIVIIN-PCNPCGNVLTYQHLQK 208
                  E     L  E G+  DL+A+ E +A +  A ++ IN P NP G V   +  ++
Sbjct: 133 GTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKK--AKLMFINYPNNPTGAVADLEFFEE 190

Query: 209 IAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV-------ITLGSISKRWIVP 261
           + + A+K  I+V  D  Y  +A+    Y P     S + V       I   S+SK + + 
Sbjct: 191 VVDFAKKYDIIVCHDAAYSEIAYDG--YKPP----SFLEVPGAKDVGIEFHSLSKTYNMT 244

Query: 262 GWRFGWLATN 271
           GWR G+   N
Sbjct: 245 GWRIGFAVGN 254

Length = 385

>gnl|CDD|180281 PRK05839, PRK05839, hypothetical protein; Provisional

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 62/244 (25%), Positives = 99/244 (40%), Gaps = 21/244 (8%)

Query: 35  LMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARR 94
           L++ +  N     + L  G+P     F T    +DA+ ++  + + N Y    G    R 
Sbjct: 14  LLKEITPNKEYKGLDLTIGEPQ----FETPKFIQDALKNN--AHLLNKYPKSAGEESLRE 67

Query: 95  AVAEYLNRDLPYKLSADDIYITLGCMEAV-EIILTVITRLGAANILLPRPGWPFYESFAK 153
           A   +  R    +L  +++  T G  E +      V+       I  P P +  YE  A 
Sbjct: 68  AQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAI 127

Query: 154 RNHIEVRHFDLLPERGWEVDLEAVE-ALADENTAAIVIIN-PCNPCGNVLTYQHLQKIAE 211
            +  +V    L  E  +   L   E    D     +VI+N P NP G  L+ + L +  +
Sbjct: 128 ASRAKVLLMPLTKENDFTPSLNEKELQEVD-----LVILNSPNNPTGRTLSLEELIEWVK 182

Query: 212 TARKLGILVIADEVYGHLAFGSTP------YIPMGVFGSIVPVITLGSISKRWIVPGWRF 265
            A K   ++I DE Y  +   + P       I +G   S   V+ + SISKR   PG R 
Sbjct: 183 LALKHDFILINDECYSEIYENTPPPSLLEASILVGN-ESFKNVLVINSISKRSSAPGLRS 241

Query: 266 GWLA 269
           G++A
Sbjct: 242 GFIA 245

Length = 374

>gnl|CDD|181081 PRK07681, PRK07681, aspartate aminotransferase; Provisional

 Score = 57.5 bits (139), Expect = 2e-09
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 5/137 (3%)

Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV-EALADENTAAIVIIN-PCN 195
           IL+P PG+  YE+  +       +  L  E  +  DLE + E +AD+  A ++I+N P N
Sbjct: 120 ILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADK--AKMMILNFPGN 177

Query: 196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF-GSTPYIPMGVFGSIVPVITLGSI 254
           P   +      +++   A+K  I+V+ D  Y    F G+ P   + V G+    + + S+
Sbjct: 178 PVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSL 237

Query: 255 SKRWIVPGWRFGWLATN 271
           SK + + G R G++  N
Sbjct: 238 SKSYSLAGSRIGYMIGN 254

Length = 399

>gnl|CDD|163316 TIGR03542, DAPAT_plant, LL-diaminopimelate aminotransferase

 Score = 57.0 bits (138), Expect = 4e-09
 Identities = 60/246 (24%), Positives = 98/246 (39%), Gaps = 36/246 (14%)

Query: 41  KNDPRPVIPLGHGDPAAFPCFRTAAVAE---DAIVDSVRSSMFNCYAPMFGLPLARRAVA 97
           KN    +I LG GD         A+V E   +A+ +      F  Y P  G P  R A+A
Sbjct: 29  KNPSADIIRLGIGDTTQPLP---ASVIEAFHNAVDELASPETFRGYGPEQGYPFLREAIA 85

Query: 98  E--YLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY------- 148
           E  Y  R     +  ++I+I+ G    V  + ++        + +  P +P Y       
Sbjct: 86  ENDYRGR-----IDPEEIFISDGAKCDVFRLQSLFGP--DNTVAVQDPVYPAYLDSNVMA 138

Query: 149 ----ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204
                      + ++ +     E  +  +L       + +   I + +P NP G VLT +
Sbjct: 139 GRAGVLDDDGRYSKITYLPCTAENNFIPELPE-----EPHIDIIYLCSPNNPTGTVLTKE 193

Query: 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF---GSIVPVITLGSISKRWIVP 261
            L+++ + A + G L++ D  Y   AF S P +P  +F   G+    I   S SK     
Sbjct: 194 QLKELVDYANEHGSLILFDAAYS--AFISDPSLPHSIFEIPGARFCAIEFRSFSKTAGFT 251

Query: 262 GWRFGW 267
           G R GW
Sbjct: 252 GVRLGW 257

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Length = 402

>gnl|CDD|181268 PRK08175, PRK08175, aminotransferase; Validated

 Score = 55.9 bits (135), Expect = 7e-09
 Identities = 40/187 (21%), Positives = 82/187 (43%), Gaps = 5/187 (2%)

Query: 88  GLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAVEIILTVITRLGAANILLPRPGWP 146
           G+P  RRA++ +        +  + +  +T+G  E +  ++      G   +L+P P +P
Sbjct: 68  GIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDT-VLVPNPSYP 126

Query: 147 FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL 206
            +   A     +VR   L+    +  +LE     +      +++  P NP    +  +  
Sbjct: 127 IHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFF 186

Query: 207 QKIAETARKLGILVIADEVYGHLAFGS--TPYIPMGVFGSIVPVITLGSISKRWIVPGWR 264
           +K+   A++  +LV+ D  Y  + +     P I M V G+    +   ++SK + + GWR
Sbjct: 187 EKVVALAKRYDVLVVHDLAYADIVYDGWKAPSI-MQVPGAKDVAVEFFTLSKSYNMAGWR 245

Query: 265 FGWLATN 271
            G++  N
Sbjct: 246 IGFMVGN 252

Length = 395

>gnl|CDD|236119 PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed

 Score = 55.7 bits (135), Expect = 9e-09
 Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 18/192 (9%)

Query: 83  YAPMFGLPLARRAVAEYLNRDLPY-KLSADDIYITLGCMEAVEIILTVITRLGAAN-ILL 140
           Y    G P  R A+  +L R      L    +   +G  E V  + T++  LG  + +++
Sbjct: 58  YPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLG-LGPGDVVVI 116

Query: 141 PRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV 200
           P   +P YE  A+     V            V  +++  L  +  A I + +P NP G V
Sbjct: 117 PELAYPTYEVGARLAGATV------------VRADSLTELGPQRPALIWLNSPSNPTGRV 164

Query: 201 LTYQHLQKIAETARKLGILVIADEVYGHLAF-GSTPYI--PMGVFGSIVPVITLGSISKR 257
           L   HL+K+   AR+ G +V +DE Y  L +      I  P    G    ++ + S+SK+
Sbjct: 165 LGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQ 224

Query: 258 WIVPGWRFGWLA 269
             + G+R G++A
Sbjct: 225 SNLAGYRAGFVA 236

Length = 364

>gnl|CDD|181219 PRK08068, PRK08068, transaminase; Reviewed

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 21/234 (8%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106
           VI LG G+P   P   T     +A+ ++  +   + Y+P  G P  + A A++  R+   
Sbjct: 34  VINLGQGNPDQ-P---TPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGV 89

Query: 107 KLSADDIYITLGCMEA--VEIILTVITRLGAAN----ILLPRPGWPFYESFAKRNHIEVR 160
            L  +     L   +A  VE+   ++      N    IL+P PG+P Y S       +  
Sbjct: 90  TLDPETEVAILFGGKAGLVELPQCLM------NPGDTILVPDPGYPDYLSGVALARAQFE 143

Query: 161 HFDLLPERGWEVDLEAV-EALADENTAAIVIIN-PCNPCGNVLTYQHLQKIAETARKLGI 218
              L+ E  +  D   + E +A++  A ++ +N P NP G V T    ++    A+K  I
Sbjct: 144 TMPLIAENNFLPDYTKIPEEVAEK--AKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNI 201

Query: 219 LVIADEVYGHLAF-GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271
            V+ D  YG + F G  P   +   G+    I L ++SK + + GWR  +   N
Sbjct: 202 GVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGN 255

Length = 389

>gnl|CDD|215327 PLN02607, PLN02607, 1-aminocyclopropane-1-carboxylate synthase

 Score = 53.7 bits (129), Expect = 4e-08
 Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 17/195 (8%)

Query: 88  GLPLARRAVAEYLN--RDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGW 145
           GL   R+A+A ++   R    +   D I +T G   A E++  ++   G A +L+P P +
Sbjct: 96  GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDA-LLVPTPYY 154

Query: 146 P-FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTA------AIVIINPCNPCG 198
           P F      R  +++          ++V  +A+EA   E  A       ++I NP NP G
Sbjct: 155 PGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLG 214

Query: 199 NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM-------GVFGSIVPVITL 251
             +    L+ I +   +  I +++DE+Y    F ++ ++ +       G  G    V  +
Sbjct: 215 ATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIV 274

Query: 252 GSISKRWIVPGWRFG 266
            S+SK   +PG+R G
Sbjct: 275 YSLSKDLGLPGFRVG 289

Length = 447

>gnl|CDD|181212 PRK08056, PRK08056, threonine-phosphate decarboxylase; Provisional

 Score = 52.8 bits (127), Expect = 7e-08
 Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 3/157 (1%)

Query: 122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA 181
             E I  V++ L     ++  PG+  Y    ++   E+R + L    GW++    +EAL 
Sbjct: 81  ETESIFAVVSGLKPRRAMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALT 140

Query: 182 DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV 241
            +    + +  P NP G +   Q LQ IAE  + L I +I DE +       T +IP   
Sbjct: 141 PD-LDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIP--Q 197

Query: 242 FGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ 278
                 +  L S++K + +PG R G+L  +D   V +
Sbjct: 198 LADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVAR 234

Length = 356

>gnl|CDD|233289 TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase

 Score = 52.6 bits (127), Expect = 7e-08
 Identities = 42/180 (23%), Positives = 66/180 (36%), Gaps = 26/180 (14%)

Query: 92  ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF 151
            R A A Y      Y L A  +    G   A E I  +   L    +L+  P +  Y   
Sbjct: 52  LRAAAAAY------YGLPAASVLPVNG---AQEAIYLLPRLLAPGRVLVLAPTYSEYARA 102

Query: 152 AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
            +    EV             DL+ + A  +E     V+ NP NP G ++  + L  +A 
Sbjct: 103 WRAAGHEVVELP---------DLDRLPAALEEADLL-VVCNPNNPTGRLIPPETLLALAA 152

Query: 212 TARKLGILVIADEVYG--HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269
             R  G  ++ DE +          P       G +V    L S++K + + G R G++ 
Sbjct: 153 RLRARGGWLVVDEAFIDFTPDASLAPQA-ARFPGLVV----LRSLTKFFGLAGLRLGFVV 207

This family contains pyridoxal phosphate-binding class II aminotransferases (see pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 330

>gnl|CDD|235106 PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 11/144 (7%)

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
             P    P  R  VA++L       +  + +    G  E +++I   +   G  N ++  
Sbjct: 60  LYPDGYAPELRTKVAKHLG------VDEEQLLFGAGLDEVIQMISRALLNPGT-NTVMAE 112

Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
           P +  Y   A     EVR    +P +    DLEA+    DE T  + I NP NP G  + 
Sbjct: 113 PTFSQYRHNAIIEGAEVRE---VPLKDGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVN 169

Query: 203 YQHLQKIAETARKLGILVIADEVY 226
           ++ L    E+     +LV+ DE Y
Sbjct: 170 HEELLSFLESVPS-HVLVVLDEAY 192

Length = 359

>gnl|CDD|181674 PRK09148, PRK09148, aminotransferase; Validated

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 59/231 (25%), Positives = 97/231 (41%), Gaps = 13/231 (5%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106
           +I LG G+P       T     D + ++ +    + Y+   G+P  RRA A Y  R    
Sbjct: 32  IIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGV 87

Query: 107 KLSAD-DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE-SFAKRNHIEVRHFDL 164
           KL+ D  +  TLG  E    +   IT  G   IL P P +P +   F     + +R    
Sbjct: 88  KLNPDTQVVATLGSKEGFANMAQAITAPGDV-ILCPNPSYPIHAFGFIMAGGV-IRSVPA 145

Query: 165 LPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224
            P+  +   LE     +     A+++  P NP   V      + +   A+K  I++++D 
Sbjct: 146 EPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDL 205

Query: 225 VYGHLAFGSTPYIP---MGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272
            Y  + F   P  P   + V G+    +   S+SK + + GWR G+   N+
Sbjct: 206 AYSEIYFDGNP--PPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNE 254

Length = 405

>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 32/159 (20%), Positives = 48/159 (30%), Gaps = 15/159 (9%)

Query: 92  ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPF-YES 150
               +A  L          D          A E  L  +   G   +++   G    Y  
Sbjct: 5   LEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDE-VIVDANGHGSRYWV 57

Query: 151 FAKRNHIEVRHF--DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQK 208
            A+    +      D     G +V     E  A  N A IVI       G       L++
Sbjct: 58  AAELAGAKPVPVPVDDAGYGGLDVA-ILEELKAKPNVALIVITPNTTSGGV---LVPLKE 113

Query: 209 IAETARKLGILVIADEVYGHLAFG-STPYIPMGVFGSIV 246
           I + A++ GIL++ D      A       IP G    + 
Sbjct: 114 IRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVT 152

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V). Length = 170

>gnl|CDD|216267 pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP-dependent enzyme

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 16/91 (17%)

Query: 147 FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL 206
            +E    R  IEV   D         DL+A+EA    NT A+ +  P NP   V+    +
Sbjct: 107 LFEKVLPRFGIEVTFVDPS-------DLDALEAAIKPNTKAVFLETPTNPLLKVVD---I 156

Query: 207 QKIAETARKLGILVIADEVYGHLAFGSTPYI 237
           + IA+ A+K G LV+ D  +       +PY+
Sbjct: 157 EAIAKIAKKHGALVVVDNTFA------SPYL 181

This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor. Length = 382

>gnl|CDD|184829 PRK14807, PRK14807, histidinol-phosphate aminotransferase; Provisional

 Score = 50.2 bits (120), Expect = 4e-07
 Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 30/208 (14%)

Query: 71  IVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA--DDIYITLGCMEAVEIILT 128
           I + V+SS  N Y             AE L  +L    S    +I++  G  E + +I+ 
Sbjct: 44  IQEIVKSSQVNIYPD---------PTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIML 94

Query: 129 VITRLGAANILLPRPGWPFYESFAK---RNHIEVRHFDLLPERGWEVDLEAVEALADENT 185
                G   ++ P P +  Y  ++K      I V+   L  +  ++V    ++ +     
Sbjct: 95  AFINKGDV-VIYPHPSFAMYSVYSKIAGAVEIPVK---LKEDYTYDVG-SFIKVIEKYQP 149

Query: 186 AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST--PYIPMGVFG 243
             + + NP NP G+V+  + + KI E +R  GI V+ DE Y    +G+T    I      
Sbjct: 150 KLVFLCNPNNPTGSVIEREDIIKIIEKSR--GI-VVVDEAYFEF-YGNTIVDVI-----N 200

Query: 244 SIVPVITLGSISKRWIVPGWRFGWLATN 271
               +I L ++SK + + G R G+   N
Sbjct: 201 EFENLIVLRTLSKAFGLAGLRVGYAVAN 228

Length = 351

>gnl|CDD|178069 PLN02450, PLN02450, 1-aminocyclopropane-1-carboxylate synthase

 Score = 50.5 bits (121), Expect = 5e-07
 Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 31/209 (14%)

Query: 88  GLPLARRAVAEYLNRDLPYKLSAD--DIYITLGCMEAVEIILTVITRLGAANILLPRPGW 145
           GLP  + A+AE+++     K++ D   + +T G   A E ++  +   G A  LLP P +
Sbjct: 87  GLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDA-FLLPTPYY 145

Query: 146 PFYESFAK-RNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNPCG 198
           P ++   K R  +E+         G+++   A+E    +          ++I NP NP G
Sbjct: 146 PGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLG 205

Query: 199 NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVI--------- 249
              T   L  + +      I +I+DE+Y    F S  ++      S++ V+         
Sbjct: 206 TTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFV------SVMEVLKDRKLENTD 259

Query: 250 ------TLGSISKRWIVPGWRFGWLATND 272
                  + S+SK   +PG+R G + +ND
Sbjct: 260 VSNRVHIVYSLSKDLGLPGFRVGAIYSND 288

Length = 468

>gnl|CDD|180317 PRK05942, PRK05942, aspartate aminotransferase; Provisional

 Score = 49.7 bits (119), Expect = 8e-07
 Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 23/235 (9%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106
           +I LG G+P          V E AI  ++     + Y P  G    R+A+ ++ +R    
Sbjct: 37  LIDLGMGNPDGAA---PQPVIEAAIA-ALADPQNHGYPPFEGTASFRQAITDWYHRRYGV 92

Query: 107 KLSADDIYITL-GCMEAVEIILTVITRLGAANI------LLPRPGWPFYESFAKRNHIEV 159
           +L  D   + L G  E        +T L  A +      L+P P +P +         ++
Sbjct: 93  ELDPDSEALPLLGSKEG-------LTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQI 145

Query: 160 RHFDLLPERGWEVDLEAV-EALADENTAAIVIIN-PCNPCGNVLTYQHLQKIAETARKLG 217
               L PE  W +DL ++ E +A +  A I+  N P NP       +  ++I   ARK  
Sbjct: 146 YPIILKPENDWLIDLSSIPEEVAQQ--AKILYFNYPSNPTTATAPREFFEEIVAFARKYE 203

Query: 218 ILVIADEVYGHLAF-GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271
           I+++ D  Y  LAF G  P   + + G+    +   ++SK + + GWR G++  N
Sbjct: 204 IMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN 258

Length = 394

>gnl|CDD|181512 PRK08637, PRK08637, hypothetical protein; Provisional

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 16/157 (10%)

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDI---YITLGCMEAVEIILTVITRLGAANIL 139
           YAP  G+P  R    E + R+ P  LS   +    +T      + ++  +    G   +L
Sbjct: 40  YAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGLSLVADLFVDQGDT-VL 97

Query: 140 LPRPGWPFYE-SFAKRNHIEVRHFDLLPERGWEVDLEA-VEAL--ADENTAAIVIIN-PC 194
           LP   W  Y+ +F  R   E+  + +  E G   D +A  EAL  A      IVI+N P 
Sbjct: 98  LPDHNWGNYKLTFNTRRGAEIVTYPIFDEDG-GFDTDALKEALQAAYNKGKVIVILNFPN 156

Query: 195 NPCGNVLTYQHLQKIAETARKLG-----ILVIADEVY 226
           NP G   T +    I E  ++L      ++ + D+ Y
Sbjct: 157 NPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAY 193

Length = 388

>gnl|CDD|234769 PRK00451, PRK00451, glycine dehydrogenase subunit 1; Validated

 Score = 48.6 bits (117), Expect = 2e-06
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 11/89 (12%)

Query: 138 ILLPRPGWPFY----ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP 193
           +L+     P Y    +++ K   IEV             DLEA+EA  D++TAA+V+  P
Sbjct: 157 VLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGV---TDLEALEAAVDDDTAAVVVQYP 213

Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIA 222
            N  G +   + L++IAE A   G L I 
Sbjct: 214 -NFFGVI---EDLEEIAEIAHAGGALFIV 238

Length = 447

>gnl|CDD|184830 PRK14809, PRK14809, histidinol-phosphate aminotransferase; Provisional

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIV-IINPCNP 196
           +L+P PG+ +Y   A+ +H EVR + +     +E   + V  L   +   IV + +P NP
Sbjct: 109 VLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTV--LDAYDGERIVYLTSPHNP 166

Query: 197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLA 230
            G+ +    ++ +AE   +   LV+ DE YG  A
Sbjct: 167 TGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFA 199

Length = 357

>gnl|CDD|236444 PRK09275, PRK09275, aspartate aminotransferase; Provisional

 Score = 47.9 bits (115), Expect = 3e-06
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 18/117 (15%)

Query: 166 PERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK----LGILVI 221
            E  W+     +E L D +  A+ ++NP NP    ++ + L+KIA+   +    L I  I
Sbjct: 223 EENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMI--I 280

Query: 222 ADEVYGHLA--FGSTPYIPMGVFGSIVPVITLG--SISKRWIVPGWRFGWLATNDPN 274
            D+VYG     F S          +++P  T+   S SK +   GWR G +A ++ N
Sbjct: 281 TDDVYGTFVDDFRS--------LFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDN 329

Length = 527

>gnl|CDD|223699 COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

 Score = 47.6 bits (114), Expect = 4e-06
 Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 19/104 (18%)

Query: 138 ILLPRP--GWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP 193
           +LLP    G  +   E   ++  +EV   D         D     A+ + NT  + +  P
Sbjct: 105 VLLPDDLYGGTYRLFEKILQKFGVEVTFVDP------GDDEALEAAIKEPNTKLVFLETP 158

Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI 237
            NP   V     +  IA  A+  G LV+ D  +      +TP +
Sbjct: 159 SNPLLEV---PDIPAIARLAKAYGALVVVDNTF------ATPVL 193

Length = 396

>gnl|CDD|235742 PRK06207, PRK06207, aspartate aminotransferase; Provisional

 Score = 47.1 bits (112), Expect = 6e-06
 Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 11/126 (8%)

Query: 151 FAKRNHIEVRHFDLLP--------ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
           FA R  +E    +++P        ++   +DL+ +E          +  NP NP G V +
Sbjct: 137 FANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYS 196

Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIV 260
            + + +IA  AR+ G  VI D++Y  L +  T Y  +     I P  VIT+   SK   +
Sbjct: 197 AEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALP-IDPENVITIMGPSKTESL 255

Query: 261 PGWRFG 266
            G+R G
Sbjct: 256 SGYRLG 261

Length = 405

>gnl|CDD|225428 COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 15/80 (18%)

Query: 164 LLPERGWEV------DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG 217
            L   G EV      D E  EA  DENT A+      NP  +VL    ++ IAE A + G
Sbjct: 121 TLKRLGIEVRFVDPDDPENFEAAIDENTKAVFAETIGNPGLDVLD---IEAIAEIAHRHG 177

Query: 218 ILVIADEVYGHLAFGSTPYI 237
           + +I D  +       TPY+
Sbjct: 178 VPLIVDNTFA------TPYL 191

Length = 426

>gnl|CDD|99738 cd00614, CGS_like, CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 15/108 (13%)

Query: 120 MEAVEIILTVITRLGAANILLPRPGW----PFYESFAKRNHIEVRHFDLLPERGWEVDLE 175
           M A+  +L  + + G  +++     +      +E    +  IEV   D         D E
Sbjct: 65  MAAISTVLLALLKAGD-HVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD-------DPE 116

Query: 176 AVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223
           A+EA     T  + + +P NP   V+    ++ IAE A + G L++ D
Sbjct: 117 ALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVD 161

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life. Length = 369

>gnl|CDD|215829 pfam00266, Aminotran_5, Aminotransferase class-V

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 47/178 (26%), Positives = 72/178 (40%), Gaps = 45/178 (25%)

Query: 92  ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILT------------VITRLGAANIL 139
           AR  VAE++N       S ++I  T G  EA+ ++              ++T +     L
Sbjct: 48  AREKVAEFINAP-----SDEEIIFTSGTTEAINLVAISLGRSLKPGDEILVTEMEHHANL 102

Query: 140 LPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGN 199
           +P   W   +  AKR    VR   + P     +DL+A+E L    T  +V I   +   N
Sbjct: 103 VP---W---QELAKRTGATVRVIPVDPN--GLLDLDALEKLLTPRTK-LVAITHVS---N 150

Query: 200 VL-TYQHLQKIAETARKLGILVIADEV--YGH------------LAFGS-TPYIPMGV 241
           V  T   +++I + A + G LV+ D     GH            LAF     Y P G+
Sbjct: 151 VTGTVNPVEEIGKLAHEYGALVVVDAAQAVGHRPIDVQALGVDFLAFSGHKLYGPTGI 208

This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-. Length = 370

>gnl|CDD|181076 PRK07671, PRK07671, cystathionine beta-lyase; Provisional

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 9/64 (14%)

Query: 173 DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
           +LE VE     NT AI +  P NP   +L    ++KI+  A++ G+L I D  +      
Sbjct: 123 NLEEVEEAIRPNTKAIYVETPTNP---LLKITDIKKISTIAKEKGLLTIVDNTF------ 173

Query: 233 STPY 236
            TPY
Sbjct: 174 MTPY 177

Length = 377

>gnl|CDD|178597 PLN03026, PLN03026, histidinol-phosphate aminotransferase; Provisional

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 17/186 (9%)

Query: 93  RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA 152
           R A+AE         L +++I +  G  E +++++  +   G   I  P P +  Y   A
Sbjct: 92  RAALAEDSG------LESENILVGCGADELIDLLMRCVLDPGDKIIDCP-PTFGMYVFDA 144

Query: 153 KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
             N  EV      P+   +V    VEA+       + + +P NP G++++   L KI E 
Sbjct: 145 AVNGAEVIKVPRTPDFSLDVP-RIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILE- 202

Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272
              L ILV+ DE Y  + F +     M        +I L + SKR  + G R G+ A   
Sbjct: 203 ---LPILVVLDEAY--IEFSTQES-RMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAF-- 254

Query: 273 PNGVLQ 278
           P  +++
Sbjct: 255 PLSIIE 260

Length = 380

>gnl|CDD|223594 COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 36/163 (22%)

Query: 92  ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILT------------VITRLGAANIL 139
           AR AVA +LN D     S+D+I  T G  EA+ ++              V++ L   + +
Sbjct: 71  AREAVARFLNAD-----SSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNI 125

Query: 140 LPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGN 199
           +P   W   +  AKR   +VR   L  +    +DL+A+E L    T  + +    +   N
Sbjct: 126 VP---W---QELAKRTGAKVRVIPLDDD--GLLDLDALEKLITPKTKLVAL----SHVSN 173

Query: 200 VL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV 241
           V  T   +++IAE A + G LV+ D      A  +  ++P+ V
Sbjct: 174 VTGTVNPVKEIAELAHEHGALVLVD------AAQAAGHLPIDV 210

Length = 405

>gnl|CDD|227325 COG4992, ArgD, Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

 Score = 43.3 bits (103), Expect = 9e-05
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 15/61 (24%)

Query: 173 DLEAVEALADENTAAIVI--------INPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224
           D+EA+EA  DE+TAA+++        + P  P       + L+ + E   + G L+I DE
Sbjct: 173 DIEALEAAIDEDTAAVIVEPIQGEGGVIPAPP-------EFLKALRELCDEHGALLILDE 225

Query: 225 V 225
           V
Sbjct: 226 V 226

Length = 404

>gnl|CDD|235064 PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated

 Score = 43.2 bits (103), Expect = 1e-04
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 166 PERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEV 225
           P + +  DL+A+ A     T  + I NP NP G  L  + +++         +LV+ DE 
Sbjct: 136 PAKDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPP-DVLVVLDEA 194

Query: 226 Y 226
           Y
Sbjct: 195 Y 195

Length = 367

>gnl|CDD|102370 PRK06425, PRK06425, histidinol-phosphate aminotransferase; Validated

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 13/145 (8%)

Query: 133 LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN 192
           +   NI++  P +  Y+ +A  + I       LP      + E +      N   I I++
Sbjct: 77  INVGNIIIVEPNFNEYKGYAFTHGIR---ISALPFNLINNNPEILNNY---NFDLIFIVS 130

Query: 193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA---FGSTPYIPMGVFGSIVPVI 249
           P NP GN+++   L  I+E  RK G L+  DE +             +       I+   
Sbjct: 131 PDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIG-- 188

Query: 250 TLGSISKRWIVPGWRFGWLATNDPN 274
              S++K   +P  R G++AT+D N
Sbjct: 189 --RSLTKILGIPSLRIGYIATDDYN 211

Length = 332

>gnl|CDD|130393 TIGR01326, OAH_OAS_sulfhy, OAH/OAS sulfhydrylase

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 16/85 (18%)

Query: 153 KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
           KR  IEVR  D  P+     D E  E   DENT A+      NP  NV      + IAE 
Sbjct: 118 KRLGIEVRFVD--PD-----DPEEFEKAIDENTKAVFAETIGNPAINVPDI---EAIAEV 167

Query: 213 ARKLGILVIADEVYGHLAFGSTPYI 237
           A   G+ +I D  +       TPY+
Sbjct: 168 AHAHGVPLIVDNTFA------TPYL 186

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities [Amino acid biosynthesis, Aspartate family, Amino acid biosynthesis, Serine family]. Length = 418

>gnl|CDD|183999 PRK13360, PRK13360, omega amino acid--pyruvate transaminase; Provisional

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 39/107 (36%), Positives = 49/107 (45%), Gaps = 27/107 (25%)

Query: 165 LPERGWEV--DLEAVEALADENTAAIVIINPCNPCGNVLT--YQHLQKIAETARKLGILV 220
            PE G E+  +LE +  L D +T A VI+ P      VL     +LQ++ E   K GIL+
Sbjct: 193 QPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILL 252

Query: 221 IADEV---YGHL-------AFGSTP------------YIPMG-VFGS 244
           I DEV   +G L        FG TP             IPMG VF S
Sbjct: 253 IFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVS 299

Length = 442

>gnl|CDD|235053 PRK02610, PRK02610, histidinol-phosphate aminotransferase; Provisional

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 13/142 (9%)

Query: 93  RRAVAEYLNRDLPYKLSADDIYITL--GCMEAVEIILTVITRLGAANILLPRPGWPFYES 150
           ++A+AEY+N             I++  G  E +  +L      G  +IL+  P +  Y  
Sbjct: 72  KQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYGI 131

Query: 151 FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTA----AIVIINPCNPCGNVLTYQHL 206
            A+   I V      PE  +E+DL A ++  ++        + +++P +P GN LT   L
Sbjct: 132 LAQTLGIPVVRVGRDPET-FEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAEL 190

Query: 207 QKIAETARKL--GILVIADEVY 226
               E  R L   ILV+ DE Y
Sbjct: 191 ----EWLRSLPEDILVVIDEAY 208

Length = 374

>gnl|CDD|163513 TIGR03801, asp_4_decarbox, aspartate 4-decarboxylase

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 20/114 (17%)

Query: 170 WEVDLEAVEALADENTAAIVIINPCNPCGNVL---TYQHLQKIAETARKLGILVIADEVY 226
           W+   + +E L D +  A+ ++NP NP    +   + + +  I    R   ++++ D+VY
Sbjct: 226 WQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRP-DLMILTDDVY 284

Query: 227 GHLA------FGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN 274
           G         F   PY  +GV+          S SK +   GWR G +A +  N
Sbjct: 285 GTFVDDFRSLFAELPYNTIGVY----------SFSKYFGATGWRLGTIALHKDN 328

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1) [Energy metabolism, Amino acids and amines]. Length = 521

>gnl|CDD|99746 cd06453, SufS_like, Cysteine desulfurase (SufS)-like

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 36/148 (24%)

Query: 92  ARRAVAEYLNRDLPYKLSADDIYITLGCMEAV---------------EIILTVITRLGAA 136
           AR  VA ++N       S D+I  T    EA+               EI+ +V+     +
Sbjct: 48  AREKVARFINAP-----SPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEH--HS 100

Query: 137 NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNP 196
           NI    P W      A+R   +++   +  + G ++DLEA+E L  E T  + +      
Sbjct: 101 NI---VP-WQQ---LAERTGAKLKVVPVDDD-G-QLDLEALEKLLTERTKLVAV----TH 147

Query: 197 CGNVL-TYQHLQKIAETARKLGILVIAD 223
             NVL T   +++I E A + G+ V+ D
Sbjct: 148 VSNVLGTINPVKEIGEIAHEAGVPVLVD 175

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine. Length = 373

>gnl|CDD|178004 PLN02376, PLN02376, 1-aminocyclopropane-1-carboxylate synthase

 Score = 41.6 bits (97), Expect = 4e-04
 Identities = 40/199 (20%), Positives = 85/199 (42%), Gaps = 24/199 (12%)

Query: 88  GLPLARRAVAEYLNRDLPYKLSADD--IYITLGCMEAVEIILTVITRLGAANILLPRPGW 145
           GL   R+A+A ++ +    K++ D   + ++ G   A E I+  +   G    L+P P  
Sbjct: 95  GLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDV-FLIPSP-- 151

Query: 146 PFYESFAK----RNHIEVRHFDLLPERGWEVDLEAVE------ALADENTAAIVIINPCN 195
            +Y +F +    R  +E+          +++ ++A +        +++    +++ NP N
Sbjct: 152 -YYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSN 210

Query: 196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLG--- 252
           P G +L    L  +     +  I ++ DE+Y    F    ++ +    + V +  +    
Sbjct: 211 PLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDL 270

Query: 253 -----SISKRWIVPGWRFG 266
                S+SK   +PG+R G
Sbjct: 271 IHIVYSLSKDMGLPGFRVG 289

Length = 496

>gnl|CDD|134568 PRK01533, PRK01533, histidinol-phosphate aminotransferase; Validated

 Score = 41.2 bits (96), Expect = 5e-04
 Identities = 42/190 (22%), Positives = 75/190 (39%), Gaps = 25/190 (13%)

Query: 85  PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPG 144
           P  G    R+ +A  L+  +   L         G  E ++II   + + G  NI+     
Sbjct: 62  PDGGATTLRQTIANKLHVKMEQVLCGS------GLDEVIQIISRAVLKAGD-NIVTAGAT 114

Query: 145 WPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204
           +P Y   A     EV+    +       DL+ + ++ D +T  + I NP NP G  +  +
Sbjct: 115 FPQYRHHAIIEGCEVKE---VALNNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDR 171

Query: 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-------VITLGSISKR 257
            L +  E   +   L++ DE Y         Y+    F   +P       ++ L + SK 
Sbjct: 172 KLTQFIEGISE-NTLIVIDEAY-------YEYVTAKDFPETLPLLEKHKNILVLRTFSKA 223

Query: 258 WIVPGWRFGW 267
           + +  +R G+
Sbjct: 224 YGLASFRVGY 233

Length = 366

>gnl|CDD|234872 PRK00950, PRK00950, histidinol-phosphate aminotransferase; Validated

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC 197
           +++P P + +YE  AK +  +  +     E  + +D+++V     E T  I +  P NP 
Sbjct: 114 VIIPTPTFSYYEISAKAHGAKPVY--AKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPT 171

Query: 198 GNVLTYQHLQKIAETARKLGILVIADEVY 226
           GN++  + ++KI E+     ++ + DE Y
Sbjct: 172 GNLIPEEDIRKILESTD--ALVFV-DEAY 197

Length = 361

>gnl|CDD|179950 PRK05166, PRK05166, histidinol-phosphate aminotransferase; Provisional

 Score = 40.9 bits (96), Expect = 6e-04
 Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 7/181 (3%)

Query: 94  RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK 153
           RA+ E +       + AD I +  G  + + +I   + R G   + L  P +P +E +  
Sbjct: 74  RALREAIAAR--TGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTL-YPSFPLHEDYPT 130

Query: 154 RNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETA 213
                V    + P+ G   DL+A+ A        ++  NP NP G+ LT   L ++ +  
Sbjct: 131 MMGARVERVTVTPDLG--FDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLDAT 188

Query: 214 RKLGILVIADEVYGHLAFGST-PYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272
               ++V+ DE Y   A G   P     +    +P I L + SK + + G R G+   +D
Sbjct: 189 PPETLIVV-DEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD 247

Query: 273 P 273
           P
Sbjct: 248 P 248

Length = 371

>gnl|CDD|235056 PRK02627, PRK02627, acetylornithine aminotransferase; Provisional

 Score = 40.9 bits (97), Expect = 6e-04
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 15/61 (24%)

Query: 173 DLEAVEALADENTAAIVI--------INPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224
           D+EA++A   + TAA+++        +NP +        ++LQ + E   + GIL+I DE
Sbjct: 171 DIEALKAAITDKTAAVMLEPIQGEGGVNPADK-------EYLQALRELCDENGILLILDE 223

Query: 225 V 225
           V
Sbjct: 224 V 224

Length = 396

>gnl|CDD|181707 PRK09221, PRK09221, beta alanine--pyruvate transaminase; Provisional

 Score = 40.6 bits (96), Expect = 8e-04
 Identities = 39/104 (37%), Positives = 47/104 (45%), Gaps = 30/104 (28%)

Query: 165 LPERGWEV--DLEAVEALADENTAAIVIINPCNPCGNVLT----YQHLQKIAETARKLGI 218
            PE G E+  DLE + AL D +T A VI+ P      VL     Y  LQ++ E   K GI
Sbjct: 196 QPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGY--LQRLREICDKHGI 253

Query: 219 LVIADEV---YGHL-------AFGSTP------------YIPMG 240
           L+I DEV   +G L        FG TP             IPMG
Sbjct: 254 LLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMG 297

Length = 445

>gnl|CDD|234972 PRK01688, PRK01688, histidinol-phosphate aminotransferase; Provisional

 Score = 40.3 bits (95), Expect = 9e-04
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 4/119 (3%)

Query: 108 LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE 167
           +  + + ++ G  E +E+++      G   IL   P +  Y   A+   +E+R    L  
Sbjct: 72  VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDN 131

Query: 168 RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY 226
             W++DL A+    D     + + +P NP GN++  Q L+ + E  R   I+V  DE Y
Sbjct: 132 --WQLDLPAIADNLD-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVA-DEAY 186

Length = 351

>gnl|CDD|180392 PRK06084, PRK06084, O-acetylhomoserine aminocarboxypropyltransferase; Validated

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 32/133 (24%)

Query: 165 LPERGWEV------DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGI 218
           LP  G E       D+ A+EAL DE T A+   +  NP GN++    +Q +A+ A + G+
Sbjct: 118 LPRIGIETRFAAHDDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGV 174

Query: 219 LVIADEVYGHLAFGSTPYI--P---------------MGVFGSIVPVITLGSISKRWIVP 261
            +I D         +TP +  P               +G  G+ +  I + S    W   
Sbjct: 175 PLIVDNTV------ATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEH 228

Query: 262 GWRFGWLATNDPN 274
             RF  L T DP+
Sbjct: 229 KERFALLNTPDPS 241

Length = 425

>gnl|CDD|99737 cd00613, GDC-P, Glycine cleavage system P-protein, alpha- and beta-subunits

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 171 EVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223
            VDLEA++    E  AA+++  P N  G       +++IA+ A   G LV  D
Sbjct: 146 TVDLEALKEEVSEEVAALMVQYP-NTLGVFE--DLIKEIADIAHSAGALVYVD 195

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <=> S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life. Length = 398

>gnl|CDD|181053 PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 59/236 (25%), Positives = 89/236 (37%), Gaps = 53/236 (22%)

Query: 25  VAAFRYAIVSLMESVDKNDPRPVIPLGHGD---PAAFPCFRTAAVAE---DAIVDSVRSS 78
           V AFR          + N    +I LG GD   P         AV E    A+ +   + 
Sbjct: 24  VNAFR----------EANPEAKIIRLGIGDVTQPLP------PAVIEAMHKAVDEMGTAE 67

Query: 79  MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG----CMEAVEIILTVITRLG 134
            F  Y P  G    R  +AE   +     +SAD+I+I+ G        ++I        G
Sbjct: 68  TFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNILDI-------FG 120

Query: 135 AAN-ILLPRPGWPFY-----------ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182
             N I +  P +P Y           E+     +  + +     E  +      V  L +
Sbjct: 121 PDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNF------VPELPE 174

Query: 183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP 238
           E    I +  P NP G VLT + L+   + A++ G L++ D  Y   AF S P +P
Sbjct: 175 EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYE--AFISDPSLP 228

Length = 409

>gnl|CDD|179888 PRK04870, PRK04870, histidinol-phosphate aminotransferase; Provisional

 Score = 38.7 bits (91), Expect = 0.002
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 13/136 (9%)

Query: 136 ANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV-EALADENTAAIVIINPC 194
           A +L P PG+  Y   AK   +E     L  +  + +DL A+  A+A+   A + +  P 
Sbjct: 106 ATVLAPEPGFVMYRMSAKLAGLEFVGVPLTAD--FTLDLPAMLAAIAEHRPALVFLAYPN 163

Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGS 253
           NP GN+     +++I E A     LV+ DE Y    F    ++P +  F +++ + T+  
Sbjct: 164 NPTGNLFDDADVERIIEAA---PGLVVVDEAYQ--PFAGDSWLPRLARFPNLLVMRTVSK 218

Query: 254 ISKRWIVPGWRFGWLA 269
           +     + G R G+LA
Sbjct: 219 LG----LAGLRLGYLA 230

Length = 356

>gnl|CDD|99735 cd00610, OAT_like, Acetyl ornithine aminotransferase family

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 166 PERGWEVDLEAVEALAD---ENTAAIVIINPCNPCGNVLTYQH--LQKIAETARKLGILV 220
           P      DLEA+E   +   E  AA VI+ P    G V+      L+ + E  RK GIL+
Sbjct: 170 PPAELADDLEALEEALEEHPEEVAA-VIVEPIQGEGGVIVPPPGYLKALRELCRKHGILL 228

Query: 221 IADEV 225
           IADEV
Sbjct: 229 IADEV 233

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation. Length = 413

>gnl|CDD|179636 PRK03715, argD, acetylornithine transaminase protein; Provisional

 Score = 38.5 bits (90), Expect = 0.004
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 173 DLEAVEALADENTAAIVIINPCNPCGNVL--TYQHLQKIAETARKLGILVIADEV 225
           D+ +VE L  + T A V++ P    G V+  T + +Q++    ++ G+L+I DEV
Sbjct: 168 DIASVEKLITDKTVA-VMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEV 221

Length = 395

>gnl|CDD|181320 PRK08247, PRK08247, cystathionine gamma-synthase; Reviewed

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 11/76 (14%)

Query: 173 DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG 232
            L+A+E     NT AI I  P NP   ++    +  IA+ A+K G+L+I D  +      
Sbjct: 125 SLKAIEQAITPNTKAIFIETPTNP---LMQETDIAAIAKIAKKHGLLLIVDNTF------ 175

Query: 233 STPYI--PMGVFGSIV 246
            TP +  P+     IV
Sbjct: 176 YTPVLQRPLEEGADIV 191

Length = 366

>gnl|CDD|216367 pfam01212, Beta_elim_lyase, Beta-eliminating lyase

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 8/69 (11%)

Query: 163 DLLPERGWEVDLEAVEALADE-------NTAAIVIINPCN-PCGNVLTYQHLQKIAETAR 214
            L      ++DLE +EA            T  I + N  N   G V++ + L++I   AR
Sbjct: 100 PLPGAEAGKLDLEDLEAAIRPVGDIHFPPTGLISLENTHNSAGGQVVSLEELREIRAIAR 159

Query: 215 KLGILVIAD 223
           + GI +  D
Sbjct: 160 EHGIPLHLD 168

Length = 288

>gnl|CDD|169399 PRK08354, PRK08354, putative aminotransferase; Provisional

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 20/165 (12%)

Query: 106 YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK-RNHIEVRHFDL 164
            KL  + I IT G  EA+ +I   I  L    +++PR  +  YE  A+      ++    
Sbjct: 50  SKLFGEPIVITAGITEALYLI--GILALRDRKVIIPRHTYGEYERVARFFAARIIKG--- 104

Query: 165 LPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224
                   D E +E L + N+  +   NP NP G    ++ L+ + +       L+I DE
Sbjct: 105 ------PNDPEKLEELVERNSV-VFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDE 157

Query: 225 VYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269
                AF    ++          +I L + +K + +PG R G++ 
Sbjct: 158 -----AF--IDFVKKPESPEGENIIKLRTFTKSYGLPGIRVGYVK 195

Length = 311

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	311
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	100.0
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	100.0
PLN02187	462	rooty/superroot1	100.0
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	100.0
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	100.0
PLN02656	409	tyrosine transaminase	100.0
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	100.0
PTZ00433	412	tyrosine aminotransferase; Provisional	100.0
PLN02368	407	alanine transaminase	100.0
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	100.0
PRK06855	433	aminotransferase; Validated	100.0
PLN00175	413	aminotransferase family protein; Provisional	100.0
PRK07681	399	aspartate aminotransferase; Provisional	100.0
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	100.0
PRK08068	389	transaminase; Reviewed	100.0
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	100.0
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	100.0
PRK07366	388	succinyldiaminopimelate transaminase; Validated	100.0
PRK06207	405	aspartate aminotransferase; Provisional	100.0
PRK05942	394	aspartate aminotransferase; Provisional	100.0
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	100.0
PRK08960	387	hypothetical protein; Provisional	100.0
PRK06290	410	aspartate aminotransferase; Provisional	100.0
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	100.0
PRK06348	384	aspartate aminotransferase; Provisional	100.0
PTZ00377	481	alanine aminotransferase; Provisional	100.0
PRK09148	405	aminotransferase; Validated	100.0
PRK08636	403	aspartate aminotransferase; Provisional	100.0
PRK09265	404	aminotransferase AlaT; Validated	100.0
PRK12414	384	putative aminotransferase; Provisional	100.0
PRK06107	402	aspartate aminotransferase; Provisional	100.0
PRK08361	391	aspartate aminotransferase; Provisional	100.0
PRK07337	388	aminotransferase; Validated	100.0
PRK07683	387	aminotransferase A; Validated	100.0
PRK07550	386	hypothetical protein; Provisional	100.0
PRK08363	398	alanine aminotransferase; Validated	100.0
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	100.0
PRK08912	387	hypothetical protein; Provisional	100.0
PRK07682	378	hypothetical protein; Validated	100.0
PRK07568	397	aspartate aminotransferase; Provisional	100.0
PLN02231	534	alanine transaminase	100.0
PRK05839	374	hypothetical protein; Provisional	100.0
PRK06108	382	aspartate aminotransferase; Provisional	100.0
PRK05957	389	aspartate aminotransferase; Provisional	100.0
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	100.0
PRK09257	396	aromatic amino acid aminotransferase; Provisional	100.0
PRK07309	391	aromatic amino acid aminotransferase; Validated	100.0
PRK05764	393	aspartate aminotransferase; Provisional	100.0
PRK07777	387	aminotransferase; Validated	100.0
PRK09082	386	methionine aminotransferase; Validated	100.0
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	100.0
PTZ00376	404	aspartate aminotransferase; Provisional	100.0
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	100.0
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	100.0
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK07324	373	transaminase; Validated	100.0
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	100.0
PRK08175	395	aminotransferase; Validated	100.0
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK06836	394	aspartate aminotransferase; Provisional	100.0
PRK01533	366	histidinol-phosphate aminotransferase; Validated	100.0
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	100.0
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	100.0
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06358	354	threonine-phosphate decarboxylase; Provisional	100.0
PRK09275	527	aspartate aminotransferase; Provisional	100.0
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	100.0
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	100.0
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	100.0
PLN02397	423	aspartate transaminase	100.0
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	100.0
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	100.0
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	100.0
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	100.0
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	100.0
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	100.0
PRK06225	380	aspartate aminotransferase; Provisional	100.0
PRK08056	356	threonine-phosphate decarboxylase; Provisional	100.0
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	100.0
PRK07392	360	threonine-phosphate decarboxylase; Validated	100.0
PLN02672	1082	methionine S-methyltransferase	100.0
PRK09105	370	putative aminotransferase; Provisional	100.0
PRK03321	352	putative aminotransferase; Provisional	100.0
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	100.0
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08637	388	hypothetical protein; Provisional	100.0
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	100.0
PRK02731	367	histidinol-phosphate aminotransferase; Validated	100.0
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	100.0
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	100.0
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	100.0
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	100.0
PRK08354	311	putative aminotransferase; Provisional	100.0
PRK00950	361	histidinol-phosphate aminotransferase; Validated	100.0
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	100.0
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	100.0
PRK07908	349	hypothetical protein; Provisional	100.0
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	100.0
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	100.0
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06425	332	histidinol-phosphate aminotransferase; Validated	99.98
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	99.97
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	99.97
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.97
KOG0634	472	consensus Aromatic amino acid aminotransferase and	99.97
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.95
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	99.94
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	99.93
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.93
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.93
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.92
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.92
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.92
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.92
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.92
PRK07049	427	methionine gamma-lyase; Validated	99.92
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	99.91
PLN02822	481	serine palmitoyltransferase	99.91
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.91
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.91
PRK02627	396	acetylornithine aminotransferase; Provisional	99.91
PRK06234	400	methionine gamma-lyase; Provisional	99.91
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.9
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	99.9
PLN02242	418	methionine gamma-lyase	99.9
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.9
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.9
PRK13392	410	5-aminolevulinate synthase; Provisional	99.9
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.89
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.89
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.89
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.89
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.89
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.89
PRK07179	407	hypothetical protein; Provisional	99.89
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.89
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.89
PRK10534	333	L-threonine aldolase; Provisional	99.89
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.89
PRK08045	386	cystathionine gamma-synthase; Provisional	99.88
PLN02721	353	threonine aldolase	99.88
PRK02948	381	cysteine desulfurase; Provisional	99.88
PRK08776	405	cystathionine gamma-synthase; Provisional	99.88
PLN02483	489	serine palmitoyltransferase	99.88
PRK08249	398	cystathionine gamma-synthase; Provisional	99.88
PRK07503	403	methionine gamma-lyase; Provisional	99.88
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.88
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.88
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.88
PRK07811	388	cystathionine gamma-synthase; Provisional	99.88
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.88
PRK08861	388	cystathionine gamma-synthase; Provisional	99.87
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.87
PRK09064	407	5-aminolevulinate synthase; Validated	99.87
PRK07050	394	cystathionine beta-lyase; Provisional	99.87
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.87
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.87
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.87
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.87
PRK08574	385	cystathionine gamma-synthase; Provisional	99.87
PRK06460	376	hypothetical protein; Provisional	99.87
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.87
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.86
PRK06767	386	methionine gamma-lyase; Provisional	99.86
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.86
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.86
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.86
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.86
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.86
PRK09028	394	cystathionine beta-lyase; Provisional	99.86
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.86
PRK13393	406	5-aminolevulinate synthase; Provisional	99.85
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.85
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.85
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.85
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.85
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.84
PLN02409	401	serine--glyoxylate aminotransaminase	99.84
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.84
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.84
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.84
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.84
PRK07582	366	cystathionine gamma-lyase; Validated	99.84
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.84
PRK14012	404	cysteine desulfurase; Provisional	99.83
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.83
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.83
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.83
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.83
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.83
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.83
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.83
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.82
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.82
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.82
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.82
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.82
PRK05939	397	hypothetical protein; Provisional	99.82
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.82
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.82
PLN02651	364	cysteine desulfurase	99.82
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.81
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.81
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.81
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.81
PRK07671	377	cystathionine beta-lyase; Provisional	99.81
PRK08064	390	cystathionine beta-lyase; Provisional	99.8
PRK07505	402	hypothetical protein; Provisional	99.8
PRK05968	389	hypothetical protein; Provisional	99.8
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.8
PLN02955	476	8-amino-7-oxononanoate synthase	99.8
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.8
PRK05967	395	cystathionine beta-lyase; Provisional	99.8
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.8
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.79
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.79
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.79
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.78
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	99.78
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.78
PLN02509	464	cystathionine beta-lyase	99.78
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	99.78
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.78
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.78
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.78
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.77
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.77
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.77
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.76
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.76
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.76
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.76
PRK04260	375	acetylornithine aminotransferase; Provisional	99.76
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.75
PRK08114	395	cystathionine beta-lyase; Provisional	99.74
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.73
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.73
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.73
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.73
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.72
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.72
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.72
PLN02624	474	ornithine-delta-aminotransferase	99.72
PLN00144	382	acetylornithine transaminase	99.71
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.71
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.71
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.71
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.7
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.69
PRK04311	464	selenocysteine synthase; Provisional	99.69
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.69
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.68
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.68
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.67
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.67
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.66
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.66
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.65
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.64
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.64
PRK06434	384	cystathionine gamma-lyase; Validated	99.64
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.63
PRK02769	380	histidine decarboxylase; Provisional	99.63
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.63
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.63
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.63
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.63
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.62
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.61
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.61
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.59
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.58
PRK13237	460	tyrosine phenol-lyase; Provisional	99.58
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.57
PLN03032	374	serine decarboxylase; Provisional	99.57
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.56
PRK15029	755	arginine decarboxylase; Provisional	99.55
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.54
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.54
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.53
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.51
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.51
PRK06541	460	hypothetical protein; Provisional	99.5
PLN02590	539	probable tyrosine decarboxylase	99.5
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.49
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.49
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.48
PLN02880	490	tyrosine decarboxylase	99.48
PLN02263	470	serine decarboxylase	99.47
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.45
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.45
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.44
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.44
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	99.44
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.43
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	99.42
PRK13578	720	ornithine decarboxylase; Provisional	99.42
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.42
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.42
PRK07482	461	hypothetical protein; Provisional	99.42
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.41
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.41
PLN02271	586	serine hydroxymethyltransferase	99.4
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	99.39
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.39
PRK05965	459	hypothetical protein; Provisional	99.39
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.39
PRK07678	451	aminotransferase; Validated	99.38
PLN02724	805	Molybdenum cofactor sulfurase	99.38
PRK06105	460	aminotransferase; Provisional	99.38
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.37
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.37
PRK12403	460	putative aminotransferase; Provisional	99.36
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.36
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.35
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.35
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.34
PRK07046	453	aminotransferase; Validated	99.33
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.33
PRK06062	451	hypothetical protein; Provisional	99.32
PRK06149	972	hypothetical protein; Provisional	99.32
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.32
PRK07481	449	hypothetical protein; Provisional	99.32
PRK07480	456	putative aminotransferase; Validated	99.32
PRK03080	378	phosphoserine aminotransferase; Provisional	99.31
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	99.31
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	99.31
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.3
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.3
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	99.3
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.3
PRK06917	447	hypothetical protein; Provisional	99.29
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	99.29
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	99.28
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.28
PRK07036	466	hypothetical protein; Provisional	99.28
PRK15400	714	lysine decarboxylase CadA; Provisional	99.27
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	99.27
PRK07483	443	hypothetical protein; Provisional	99.27
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.27
PRK05367	954	glycine dehydrogenase; Provisional	99.27
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.27
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.25
PRK06148	1013	hypothetical protein; Provisional	99.25
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.25
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.24
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.23
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.22
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.21
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	99.21
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.15
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	99.15
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	99.14
PRK12566	954	glycine dehydrogenase; Provisional	99.12
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.11
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	99.09
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	99.07
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.07
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.01
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	99.01
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	98.97
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	98.97
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	98.95
PRK08297	443	L-lysine aminotransferase; Provisional	98.95
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	98.94
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	98.94
PRK12462	364	phosphoserine aminotransferase; Provisional	98.88
COG4100	416	Cystathionine beta-lyase family protein involved i	98.88
PLN02452	365	phosphoserine transaminase	98.85
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	98.82
PRK05367	954	glycine dehydrogenase; Provisional	98.72
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	98.68
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	98.63
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	98.62
PLN02414	993	glycine dehydrogenase (decarboxylating)	98.61
COG3844	407	Kynureninase [Amino acid transport and metabolism]	98.55
KOG0629	510	consensus Glutamate decarboxylase and related prot	98.33
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	98.32
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	98.19
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	98.09
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	97.99
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	97.84
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	97.8
PLN02672	1082	methionine S-methyltransferase	97.71
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	97.68
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	97.25
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	97.08
PRK12566	954	glycine dehydrogenase; Provisional	95.91
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	95.62
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	95.39
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	95.13
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	94.43
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	94.15
COG2102	223	Predicted ATPases of PP-loop superfamily [General	87.68
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	85.65
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	85.31
CHL00200	263	trpA tryptophan synthase alpha subunit; Provisiona	82.53
PLN02591	250	tryptophan synthase	82.22
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	80.73

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=5.4e-51  Score=351.78  Aligned_cols=299  Identities=56%  Similarity=0.993  Sum_probs=286.6

Q ss_pred             cccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC
Q 021547            8 KWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF   87 (311)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~   87 (311)
                      .|+.+-|..+++   +....||.++..+.......+.+++|.+++|+|..|+++++.++..+|+.+++.++.+++|+|+.
T Consensus        27 ~W~f~gs~~a~k---a~~~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~  103 (447)
T KOG0259|consen   27 VWRFKGSDAAKK---AASVTIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSV  103 (447)
T ss_pred             ceeeccchhhhh---hccccHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCcc
Confidence            499999988888   89999999999988777655567999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE  167 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~  167 (311)
                      |+...|+++|+|+++...-.+++++|++|+|.++|+++++.+|.+|| ..||+|+|+|+-|...+...|+++..+++.++
T Consensus       104 G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~-aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe  182 (447)
T KOG0259|consen  104 GILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPG-ANILLPRPGFPLYDTRAIYSGLEVRYYDLLPE  182 (447)
T ss_pred             ccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCC-CceecCCCCCchHHHhhhhcCceeEeecccCc
Confidence            99999999999999988888999999999999999999999999999 99999999999999999999999999999999


Q ss_pred             CCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCC
Q 021547          168 RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP  247 (311)
Q Consensus       168 ~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~  247 (311)
                      .+|.+|++.+|.+++++|.++++.||+||+|.+++.+.|++|+++|++++++||.||+|+.+.|++.++.++..+....+
T Consensus       183 ~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVP  262 (447)
T KOG0259|consen  183 KDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVP  262 (447)
T ss_pred             ccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          248 VITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       248 ~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +|.++|+||.|-.||||+||++.+|+..+++..++++.++.+.+....++++.|.|+-.+|+.
T Consensus       263 VitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~k  325 (447)
T KOG0259|consen  263 VITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEK  325 (447)
T ss_pred             eEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHh
Confidence            999999999999999999999999999999988888999999988899999999999998864

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=3.8e-48  Score=360.46  Aligned_cols=301  Identities=61%  Similarity=1.087  Sum_probs=263.2

Q ss_pred             cccccccchHH-hhHHHHhhhhhHHHHHHHHHhhhccCC-CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC
Q 021547            6 EKKWGFEVKQE-LNREREAEVAAFRYAIVSLMESVDKND-PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCY   83 (311)
Q Consensus         6 ~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y   83 (311)
                      .+.|....++. ...   .....++..+..+.+.+.+.. +.++|+|++|+|..++.+++++.+.+++.+.+..+....|
T Consensus        14 ~~~w~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y   90 (430)
T PLN00145         14 TARWRFERANAALAA---AGALSIRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSY   90 (430)
T ss_pred             cccccccCchhhHHH---hcccchhhHHHHHHHhhhcccCCCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCC
Confidence            58899999875 333   444568888877777765553 7899999999999998899999999999999887666689


Q ss_pred             CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEee
Q 021547           84 APMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFD  163 (311)
Q Consensus        84 ~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~  163 (311)
                      ++..|.+++|+++++++++.+|.++++++|++|+|+++++.+++.++.++| |+|+++.|+|+.|...+...|.+++.++
T Consensus        91 ~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~G-d~Vlv~~P~y~~y~~~~~~~g~~~~~~~  169 (430)
T PLN00145         91 STCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPG-ANILLPRPGYPLYEARAVFSGLEVRHFD  169 (430)
T ss_pred             CCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCCccHHHHHHHcCCEEEEee
Confidence            998999999999999999988999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      +.++++|.+|++.+++.++++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.|++.++.++..+.
T Consensus       170 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~  249 (430)
T PLN00145        170 LLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFG  249 (430)
T ss_pred             CCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhc
Confidence            87777899999999999999999999999999999999999999999999999999999999999998776666766666


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ...++|+++||||.|++||+|+||++++++..+++..+++..++.+.....+++.+.|.++..+|++
T Consensus       250 ~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~  316 (430)
T PLN00145        250 EVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIAN  316 (430)
T ss_pred             ccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhc
Confidence            6678999999999999999999999987765444333445666666665567789999999999874

>PLN02187 rooty/superroot1

Probab=100.00  E-value=3.4e-48  Score=363.22  Aligned_cols=301  Identities=50%  Similarity=0.924  Sum_probs=261.9

Q ss_pred             ccccccccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC
Q 021547            3 NEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC   82 (311)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~   82 (311)
                      ++..+.|+...++.++.   .....||.+...+++...++..+++|+|++|+|+.+|.+.+++.+.+++.+.+..+....
T Consensus        27 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~  103 (462)
T PLN02187         27 NGQSSVWRFGGSDKAAK---ASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNS  103 (462)
T ss_pred             cccccccccCcchhhhh---hhhchHhhHHHHHHhhcccCCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCC
Confidence            44556799999988888   776789999888877777677899999999999988888899999999999887666668


Q ss_pred             CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEe
Q 021547           83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHF  162 (311)
Q Consensus        83 Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~  162 (311)
                      |.+..|.+++|+++++++++.+++++++++|++|+|+++++.+++.+++++| |+|+++.|+|+.|...++..|.+++.+
T Consensus       104 Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pG-d~Vlv~~P~y~~y~~~~~~~g~~~~~~  182 (462)
T PLN02187        104 YGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPN-ANILLPRPGFPHYDARAAYSGLEVRKF  182 (462)
T ss_pred             CCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCC-CEEEEeCCCCccHHHHHHHcCCEEEEE
Confidence            9999999999999999999888999999999999999999999999999999 999999999999999999999999999


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      ++.+++++.+|++.+++.++++++++++++|+||||.+++.+++++|+++|++||++||+||+|..+.|++.++.++..+
T Consensus       183 ~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~  262 (462)
T PLN02187        183 DLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKF  262 (462)
T ss_pred             eCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHh
Confidence            98666789999999999998899999999999999999999999999999999999999999999999977666566666


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh---hhccccCCCchhHHHHHhhhhc
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA---CLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ....++|+++||||.|++||+|+||+++++++..+   ++++.+..   ..+.+.+++.++|.+++++|++
T Consensus       263 ~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~---~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~  330 (462)
T PLN02187        263 ASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVF---ETTKVLQSIKQNLDVTPDPATIIQAALPAILEK  330 (462)
T ss_pred             ccCCcEEEEecchhhcCCccceeEEEEecCchhHH---HHHHHHHHHHHhccccCCCCHHHHHHHHHHHhc
Confidence            55567999999999999999999999987654222   12233333   3333446689999999999864

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.1e-47  Score=351.43  Aligned_cols=253  Identities=28%  Similarity=0.464  Sum_probs=229.5

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCC-EEEeCChHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADD-IYITLGCMEAV  123 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~-v~~t~g~~~a~  123 (311)
                      .++|+|++|+|+    +++|+.+.+++.+++..+.. .|.+..|.++||+++++++.+++|..+.+++ |++|+|+++|+
T Consensus        28 ~~vi~l~iG~Pd----~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al  102 (393)
T COG0436          28 EDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEAL  102 (393)
T ss_pred             CCEEEeCCCCCC----CCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHH
Confidence            689999999975    78899999999999886644 6779999999999999999999999898877 99999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC-CCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE-RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      ..++.+++++| |+|++++|.|+.|...++..|.+++.+++... ++|.+|.+.|++.+++++|++++++||||||.+++
T Consensus       103 ~~~~~a~~~pG-DeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~  181 (393)
T COG0436         103 FLAFLALLNPG-DEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYS  181 (393)
T ss_pred             HHHHHHhcCCC-CEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCC
Confidence            99999999999 99999999999999999999999999997655 48999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      ++++++|+++|++||++||.||+|..+.|++..+.++..+.. .+++|++.||||.|+++|||+||++++++       .
T Consensus       182 ~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~-------~  254 (393)
T COG0436         182 KEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPE-------E  254 (393)
T ss_pred             HHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChH-------H
Confidence            999999999999999999999999999999865566555554 46899999999999999999999998753       3


Q ss_pred             HHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547          282 IVGSIKACL-GVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       282 ~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++.+.... ....+++.++|.++.++|+.
T Consensus       255 l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~  284 (393)
T COG0436         255 LIAALRKLKSYLTSCAPTPAQYAAIAALNG  284 (393)
T ss_pred             HHHHHHHHHHhcccCCCHHHHHHHHHHhcC
Confidence            777777554 45679999999999999985

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=9.7e-46  Score=342.81  Aligned_cols=282  Identities=61%  Similarity=1.049  Sum_probs=240.2

Q ss_pred             HHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC
Q 021547           28 FRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK  107 (311)
Q Consensus        28 i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~  107 (311)
                      |+..+..+.+.+....++++|+|+.|+|+.|..+++++.+.+++.+.+.......|.++.|.+++|+++++++++++|++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~   94 (409)
T PLN00143         15 IDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQ   94 (409)
T ss_pred             HHHHHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence            44444444444555678999999999988666689999999999998876666679998999999999999999988999


Q ss_pred             CCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547          108 LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA  187 (311)
Q Consensus       108 ~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  187 (311)
                      +++++|++|+|+++++..++.+++++| |.|+++.|+|+.|...++..|.+++.+++.+++++.+|++.+++++++++++
T Consensus        95 ~~~~~I~it~G~~~al~~~~~~l~~~g-d~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~  173 (409)
T PLN00143         95 LSPDDVYLTLGCKHAAEIIIKVLARPE-ANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIA  173 (409)
T ss_pred             CCHhhEEEecChHHHHHHHHHHHcCCC-CEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEE
Confidence            999999999999999999999999999 9999999999999999999999999998865667889999999988888999


Q ss_pred             EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeE
Q 021547          188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW  267 (311)
Q Consensus       188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~  267 (311)
                      +++++||||||.+++.+++++|+++|++|+++||+||+|..+.|++.++.++..++...++|+++||||.|++||+|+||
T Consensus       174 ~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~  253 (409)
T PLN00143        174 MVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGW  253 (409)
T ss_pred             EEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEE
Confidence            99999999999999999999999999999999999999999998765555555565566899999999999999999999


Q ss_pred             EEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          268 LATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       268 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++++++...+..++++.+........+++.++|.+++++|++
T Consensus       254 ~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~  296 (409)
T PLN00143        254 LVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEK  296 (409)
T ss_pred             EEeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhc
Confidence            9986654333222234555544433345688999999998864

>PLN02656 tyrosine transaminase

Probab=100.00  E-value=4.1e-45  Score=338.77  Aligned_cols=282  Identities=62%  Similarity=1.087  Sum_probs=243.8

Q ss_pred             HHHHHHHHHhhh-ccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCC
Q 021547           28 FRYAIVSLMESV-DKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY  106 (311)
Q Consensus        28 i~~~~~~~~~~~-~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~  106 (311)
                      ++..+..+++.+ .+.+++++|+|+.|+|+..+.+++++.+.+++.+++..+...+|.+..|.+++|+++++++++.+|+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~   92 (409)
T PLN02656         13 IKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPY   92 (409)
T ss_pred             hhhHHHHHHHhccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence            555555555444 3346899999999999866668899999999999888766678999999999999999999998899


Q ss_pred             CCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCcc
Q 021547          107 KLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTA  186 (311)
Q Consensus       107 ~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~  186 (311)
                      .+++++|++|+|+++++..++.+++++| |+|++++|+|+.|...++..|++++.+++.+++++.+|++.+++.++++++
T Consensus        93 ~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~  171 (409)
T PLN02656         93 KLSLDDVFITSGCTQAIDVALSMLARPG-ANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTV  171 (409)
T ss_pred             CCCcccEEEeCChHHHHHHHHHHHhCCC-CeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCce
Confidence            9999999999999999999999999999 999999999999999999999999999986666788999999999988999


Q ss_pred             EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceee
Q 021547          187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG  266 (311)
Q Consensus       187 ~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G  266 (311)
                      ++++++|+||||.+++.+++++|+++|+++|++||+|++|..+.|++.++.++..++...++|+++||||.|++||+|+|
T Consensus       172 ~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG  251 (409)
T PLN02656        172 ALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLG  251 (409)
T ss_pred             EEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEE
Confidence            99999999999999999999999999999999999999999999987655565555556689999999999999999999


Q ss_pred             EEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          267 WLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       267 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      |+++++++..+..++++++++.......+++.++|.+++++|++
T Consensus       252 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~  295 (409)
T PLN02656        252 WFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQ  295 (409)
T ss_pred             EEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhc
Confidence            99997543332223577887776554456789999999999864

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=100.00  E-value=1.3e-43  Score=337.44  Aligned_cols=291  Identities=21%  Similarity=0.369  Sum_probs=239.1

Q ss_pred             ccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCC
Q 021547            9 WGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFG   88 (311)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g   88 (311)
                      |...+|++.+.   -..+.++.+.. .++.++ ..+.++|+|+.|+|..+ .+++|+.+.+++.+.+..  ..+|++..|
T Consensus       115 ~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~-~~g~~~i~l~~G~p~~~-~~~~p~~~~~~~~~~~~~--~~~Y~~~~G  186 (517)
T PRK13355        115 RTFKKSHKLDN---VLYDVRGPVVD-EANRME-AAGTHILKLNIGNPAPF-GFRTPDEVVYDMAQQLTD--TEGYSDSKG  186 (517)
T ss_pred             cCCChhHHhhc---cCccHHHHHHH-HHHHHH-HcCCCeEEecCcCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCcC
Confidence            66667777666   34443333433 233332 24789999999998644 367789999999887753  347999999


Q ss_pred             cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC
Q 021547           89 LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER  168 (311)
Q Consensus        89 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~  168 (311)
                      ..+||++++++++.+.+.++++++|++|+|+++++.+++.+++++| |+|+++.|+|+.|...++..|.+++.++++.++
T Consensus       187 ~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~G-d~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~  265 (517)
T PRK13355        187 LFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDG-DEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQS  265 (517)
T ss_pred             hHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCC-CEEEEcCCCCcCHHHHHHHCCCEEEEeecCccc
Confidence            9999999999998877667899999999999999999999999999 999999999999999999999999999887777


Q ss_pred             CcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547          169 GWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV  248 (311)
Q Consensus       169 ~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~  248 (311)
                      +|.+|++++++.++++++++++++||||||.+++.+++++|+++|++||++||+||+|..+.|++.++.++..+..+..+
T Consensus       266 ~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~v  345 (517)
T PRK13355        266 EWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFC  345 (517)
T ss_pred             CCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeE
Confidence            89999999999999899999999999999999999999999999999999999999999999987666666666554467


Q ss_pred             EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          249 ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       249 i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      |+++||||.|+++|+|+||++++.+....  .++++.+........+++.++|.++.++|++
T Consensus       346 i~~~S~SK~~~~~G~RiG~~i~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~  405 (517)
T PRK13355        346 VTFSGLSKSHMIAGYRIGWMILSGNKRIA--KDYIEGLNMLANMRLCSNVPAQSIVQTALGG  405 (517)
T ss_pred             EEEecchhhccCcccceEEEEeeCchhhH--HHHHHHHHHHhcCcCCcChHHHHHHHHHhcC
Confidence            88999999999999999999976443221  1245555444444457889999999988853

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=100.00  E-value=3.6e-43  Score=326.12  Aligned_cols=293  Identities=31%  Similarity=0.593  Sum_probs=240.2

Q ss_pred             cccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC
Q 021547            8 KWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF   87 (311)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~   87 (311)
                      +|..+-+++...--.+....+++++.       ...++++|+|+.|.|...+.+.+++.+.+++.+.+......+|+++.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~   75 (412)
T PTZ00433          3 FWDVSMSKHAGRVFNPLRTVTDNAKP-------SPSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTV   75 (412)
T ss_pred             cccccccHHHHhhhccHHHHHHhhcc-------CCCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCC
Confidence            56666665555511122333333322       12578999999999875444667899999999888765566899989


Q ss_pred             CcHHHHHHHHHHHhhcC------CCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEE
Q 021547           88 GLPLARRAVAEYLNRDL------PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRH  161 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~------g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~  161 (311)
                      |.++||+++++++++.+      |..+++++|++|+|+++++.+++.+++++| |+|+++.|+|..|...++..|.+++.
T Consensus        76 G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~  154 (412)
T PTZ00433         76 GSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEG-DNILVPAPGFPHYETVCKAYGIEMRF  154 (412)
T ss_pred             CcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCC-CEEEEccCCcccHHHHHHHcCCEEEE
Confidence            99999999999998754      467889999999999999999999999999 99999999999999999999999999


Q ss_pred             eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547          162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV  241 (311)
Q Consensus       162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~  241 (311)
                      +++..+.++++|++++++.++++++++++++||||||.+++.+++++|+++|+++|++||+||+|..+.|++..+.++..
T Consensus       155 i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~  234 (412)
T PTZ00433        155 YNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVAD  234 (412)
T ss_pred             EecCccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhh
Confidence            99876667899999999988888999999999999999999999999999999999999999999999887655555666


Q ss_pred             cCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          242 FGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       242 ~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++...++|+++||||.|++||+|+||++++++....  +++++.++.......++++++|.+++++|++
T Consensus       235 ~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~  301 (412)
T PTZ00433        235 FDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNG--GDFLDGMKRLGMLVCGPCSVVQAALGEALLN  301 (412)
T ss_pred             ccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccH--HHHHHHHHHHhhccCCCChHHHHHHHHHHhc
Confidence            655557899999999999999999999985442211  2367777666544457899999999988864

>PLN02368 alanine transaminase

Probab=100.00  E-value=3e-43  Score=324.19  Aligned_cols=262  Identities=24%  Similarity=0.370  Sum_probs=217.6

Q ss_pred             CCCCeeecCCCCCCC-------CC-------------------CCCCcHHHHHHHHHHHh-cCCCCCCCCCCCcHHHHHH
Q 021547           43 DPRPVIPLGHGDPAA-------FP-------------------CFRTAAVAEDAIVDSVR-SSMFNCYAPMFGLPLARRA   95 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~-------~~-------------------~~~~~~~~~~a~~~~~~-~~~~~~Y~~~~g~~~lr~~   95 (311)
                      .+.++|+|++|+|+.       ++                   .+.+++.+.+++..... .....+|++..|.++||++
T Consensus        36 ~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~a  115 (407)
T PLN02368         36 EGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKE  115 (407)
T ss_pred             HhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHH
Confidence            478999999999862       10                   01256666666654322 2345689999999999999


Q ss_pred             HHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCH
Q 021547           96 VAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDL  174 (311)
Q Consensus        96 ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  174 (311)
                      +++|+++++|+.+++++|++|+|+++++..++.+++ ++| |.|++++|+|+.|...++..|.+++.+++..+++|.+|+
T Consensus       116 ia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pG-d~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~  194 (407)
T PLN02368        116 VAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEK-DGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDV  194 (407)
T ss_pred             HHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCC-CEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCH
Confidence            999999988998999999999999999999999997 699 999999999999999999999999999987777789999


Q ss_pred             HHHHhhcCC------CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCccccc----C
Q 021547          175 EAVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIPMGVF----G  243 (311)
Q Consensus       175 ~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~~~~~----~  243 (311)
                      +.+++.+++      +++++++++|+||||.+++.+++++|+++|++||++||+||+|..+.|++. ++.++..+    +
T Consensus       195 ~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~  274 (407)
T PLN02368        195 NNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMG  274 (407)
T ss_pred             HHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhc
Confidence            999998763      689999999999999999999999999999999999999999999999764 44443222    1


Q ss_pred             ----CCCCeEEEecCcccC-CCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          244 ----SIVPVITLGSISKRW-IVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       244 ----~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                          ..+++|+++||||.| +++|+|+||+++.+..     +++++.+.......+++|.++|+++.++|++
T Consensus       275 ~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~-----~~li~~~~~~~~~~~~~~~~~Q~aa~~~l~~  341 (407)
T PLN02368        275 PPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP-----PKTVEEIYKVASIALSPNVSGQIFMGLMVNP  341 (407)
T ss_pred             ccccccceEEEEecCCcccccCCccceEEEEEeCCC-----HHHHHHHHHHhcccCCCCcHHHHHHHHHhCC
Confidence                245899999999998 8999999999962110     2477777776544567899999999998863

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=100.00  E-value=2.7e-42  Score=319.46  Aligned_cols=283  Identities=52%  Similarity=0.937  Sum_probs=241.6

Q ss_pred             hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhc
Q 021547           24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD  103 (311)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~  103 (311)
                      ....|+++.+.+.+..  ..+.++|+|+.|+|..+|.+++++.+.+++.+.+.......|.+..|..++|++++++++..
T Consensus        12 ~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~   89 (403)
T TIGR01265        12 TVNPIRAIVDNLKVKP--NPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSD   89 (403)
T ss_pred             HHHHHHHHHHHHHHHH--hcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhh
Confidence            4456777776654431  24689999999999877788999999999999887655568988899999999999999987


Q ss_pred             CCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC
Q 021547          104 LPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE  183 (311)
Q Consensus       104 ~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~  183 (311)
                      +++.+.+++|++|+|+++++.+++.+++.+| |+|+++.|+|..+...++..|.+++.+++.+.+++.+|++.+++.+++
T Consensus        90 ~~~~~~~~~ii~t~G~t~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~  168 (403)
T TIGR01265        90 LPGKLTADDVVLTSGCSQAIEICIEALANPG-ANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADE  168 (403)
T ss_pred             cCCCCCHHHEEEecChHHHHHHHHHHhCCCC-CEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCc
Confidence            8888899999999999999999999999999 999999999999999999999999999876666788999999999888


Q ss_pred             CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547          184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW  263 (311)
Q Consensus       184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~  263 (311)
                      +++++++++|+||||.+++.+++++|+++|+++|++||+|++|+++.+++.++.++..++...++|+++||||.|++||+
T Consensus       169 ~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl  248 (403)
T TIGR01265       169 KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGW  248 (403)
T ss_pred             CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcc
Confidence            89999999999999999999999999999999999999999999999877665666667666689999999999999999


Q ss_pred             eeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          264 RFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       264 r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      |+||+++++++..+. +++++.++.+.....+++.++|.+++.+|++
T Consensus       249 RiG~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  294 (403)
T TIGR01265       249 RLGWIIIHDPHGIFR-DTVLQGLKNLLQRILGPATIVQGALPDILEN  294 (403)
T ss_pred             eEEEEEEeCchhhhH-HHHHHHHHHHhhhhcCCChHHHHHHHHHHHh
Confidence            999999976532221 1245556555444457899999999998863

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PRK06855 aminotransferase; Validated

Probab=100.00  E-value=1.7e-42  Score=323.19  Aligned_cols=265  Identities=25%  Similarity=0.339  Sum_probs=219.9

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .+.++++|+.|+|..+ .+++|+.+.+++.+.+......+|.+..|.++||+++++|+++++|+.+++++|++|+|++++
T Consensus        30 ~g~~~~~~~~G~p~~~-~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a  108 (433)
T PRK06855         30 LGVKITWENIGDPIAK-GEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA  108 (433)
T ss_pred             ccccccccccCCCccc-CCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence            4678999999998543 478899999999988765556689999999999999999999988999999999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHH-HHHcCcEEEEeeccCCCCcccCHHHHHhhcC--CCccEEEEeCCCCCCcc
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESF-AKRNHIEVRHFDLLPERGWEVDLEAVEALAD--ENTAAIVIINPCNPCGN  199 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~p~nptG~  199 (311)
                      +..++. ++.+| |.|+++.|+|+.|... ....|.+++.++++++++|.+|+++|++.++  ++++++++++|+||||.
T Consensus       109 l~~~~~-l~~~G-d~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~  186 (433)
T PRK06855        109 IAKIYG-LLRRE-ARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGA  186 (433)
T ss_pred             HHHHHH-hcCCC-CeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCc
Confidence            999985 78899 9999999999998754 3456888898888666778899999999886  46789999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547          200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK  279 (311)
Q Consensus       200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~  279 (311)
                      +++.+++++|+++|++||++||+||+|..+.|++.++.++..+..+.++|+++||||.|++||+|+||+++++....-..
T Consensus       187 ~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~  266 (433)
T PRK06855        187 VYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVF  266 (433)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHH
Confidence            99999999999999999999999999999998776556666655445689999999999999999999998642100000


Q ss_pred             hhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          280 SGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ..+++.+........+++.++|.+++++|++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~  297 (433)
T PRK06855        267 KKYINSILNAKMIEVCSTTLPQMAIPRIMSH  297 (433)
T ss_pred             HHHHHHHHHhhccccCCChHHHHHHHHhhcC
Confidence            1234444444333456789999999999875

>PLN00175 aminotransferase family protein; Provisional

Probab=100.00  E-value=2.3e-42  Score=320.38  Aligned_cols=265  Identities=25%  Similarity=0.415  Sum_probs=228.0

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR  102 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~  102 (311)
                      ...+.++++....       ...++|+|+.|.|+    +++++.+.+++.+.+..+ ..+|+++.|.++||+++++++++
T Consensus        39 ~~~~~~~~~~~~~-------~~~~~i~l~~G~P~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~  106 (413)
T PLN00175         39 FKTTIFTQMSSLA-------IKHGAINLGQGFPN----FDGPDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIAERFKK  106 (413)
T ss_pred             CCCCHHHHHHHHh-------hcCCeEecCCCCCC----CCCCHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHHHHHHH
Confidence            4555566655432       24589999999976    566889999999888753 45899999999999999999999


Q ss_pred             cCCCCCCCC-CEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc
Q 021547          103 DLPYKLSAD-DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA  181 (311)
Q Consensus       103 ~~g~~~~~~-~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l  181 (311)
                      .+|+.++++ +|++|+|+++++..++.+++++| |+|++++|+|..|...++..|.+++.+++.++ ++.+|++.|++.+
T Consensus       107 ~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~l~~~~  184 (413)
T PLN00175        107 DTGLVVDPEKEVTVTSGCTEAIAATILGLINPG-DEVILFAPFYDSYEATLSMAGAKIKTVTLRPP-DFAVPEDELKAAF  184 (413)
T ss_pred             HhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCC-CEEEEeCCCchhHHHHHHHcCCEEEEEECCcc-cCCCCHHHHHHhc
Confidence            889888887 79999999999999999999999 99999999999999999999999999998543 4789999999999


Q ss_pred             CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCC
Q 021547          182 DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIV  260 (311)
Q Consensus       182 ~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~  260 (311)
                      .++++++++++|+||||.+++.+++++|+++|++|+++||+||+|..+.|++. +.++..++. .+++|+++||||.|++
T Consensus       185 ~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~i~SfSK~~~~  263 (413)
T PLN00175        185 TSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVTMNSLGKTFSL  263 (413)
T ss_pred             CcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcEEEEecchhhccC
Confidence            88999999999999999999999999999999999999999999999988653 335555543 4689999999999999


Q ss_pred             CcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          261 PGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       261 ~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ||+|+||++++.        ++++.+..... ...++|.++|.+++++|++
T Consensus       264 ~G~RiG~~v~~~--------~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~  306 (413)
T PLN00175        264 TGWKIGWAIAPP--------HLTWGVRQAHSFLTFATATPMQWAAVAALRA  306 (413)
T ss_pred             cchheeeeEeCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHhC
Confidence            999999999853        47777776643 4578899999999999875

>PRK07681 aspartate aminotransferase; Provisional

Probab=100.00  E-value=6.3e-42  Score=316.72  Aligned_cols=271  Identities=21%  Similarity=0.289  Sum_probs=228.1

Q ss_pred             hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhc
Q 021547           24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD  103 (311)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~  103 (311)
                      ..+.++++.....+.  +..++++|+|+.|+|.    +++++.+.+++.+.+......+|. +.|..++|++++++++++
T Consensus        13 ~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~   85 (399)
T PRK07681         13 QSSIFSELGAYKKEK--IAAGHKMIDLSIGNPD----MPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNT   85 (399)
T ss_pred             CccHHHHHHHHHHHh--hhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHH
Confidence            444555554433221  1246789999999965    566888999998877543333455 479999999999999998


Q ss_pred             CCCCCCC-CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547          104 LPYKLSA-DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD  182 (311)
Q Consensus       104 ~g~~~~~-~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~  182 (311)
                      +|+.+++ ++|++|+|+++++..++.+++++| |+|+++.|+|+.|...++..|.+++.++++.++++.+|++.+++.+.
T Consensus        86 ~g~~~~~~~~I~it~G~~~al~~~~~~~~~~G-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~  164 (399)
T PRK07681         86 HNVILNADKEVLLLMGSQDGLVHLPMVYANPG-DIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA  164 (399)
T ss_pred             hCCCCCCCCeEEECCCcHHHHHHHHHHhCCCC-CEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc
Confidence            9999998 899999999999999999999999 99999999999999999999999999998666678899999999888


Q ss_pred             CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCC
Q 021547          183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVP  261 (311)
Q Consensus       183 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~  261 (311)
                      ++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.|++.++.++..++. .+++|+++||||.|++|
T Consensus       165 ~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~  244 (399)
T PRK07681        165 DKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLA  244 (399)
T ss_pred             ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCc
Confidence            88999999999999999999999999999999999999999999999887655555555543 35799999999999999


Q ss_pred             cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          262 GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       262 G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      |+|+||++++.        ++++.+..... ..++++.++|.++.++|++
T Consensus       245 GlRiG~~i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~  286 (399)
T PRK07681        245 GSRIGYMIGNE--------EIVRALTQFKSNTDYGVFLPIQKAACAALRN  286 (399)
T ss_pred             cceeEEEecCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhC
Confidence            99999998743        47888877654 4568899999999999875

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=100.00  E-value=1.7e-42  Score=304.00  Aligned_cols=247  Identities=27%  Similarity=0.417  Sum_probs=221.4

Q ss_pred             cCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHHHHHHHHH
Q 021547           50 LGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCMEAVEIILT  128 (311)
Q Consensus        50 ~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~a~~~~~~  128 (311)
                      |+.|.|+    +++|..+.++++.+......++|.+..|+++|++++++.+...+|....+ ++|++|.|+.+++..++.
T Consensus        36 LgqGfp~----~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~  111 (420)
T KOG0257|consen   36 LGQGFPD----FPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL  111 (420)
T ss_pred             ccCCCCC----CCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence            9999854    89999999999999988778899999999999999999999978765555 569999999999999999


Q ss_pred             HHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeecc------CCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          129 VITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL------PERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       129 ~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +++++| |+|++.+|.|..|....+..|...+.+++.      ..++|.+|.++++..+++++|+|++++||||||.+++
T Consensus       112 ~l~~~G-DeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfs  190 (420)
T KOG0257|consen  112 GLLNPG-DEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFS  190 (420)
T ss_pred             HHcCCC-CEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccC
Confidence            999999 999999999999999999999999999987      4577999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      +++|++|+++|++||+++|+||+|..+.|++..+..+..+.. .+++|.++|+||+|++.|||+||++++.        .
T Consensus       191 ReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~--------~  262 (420)
T KOG0257|consen  191 REELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK--------H  262 (420)
T ss_pred             HHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechH--------H
Confidence            999999999999999999999999999999887777776633 4489999999999999999999999833        2


Q ss_pred             HHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          282 IVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       282 ~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++..+... .+....+++..|.|.++.+.
T Consensus       263 L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~  291 (420)
T KOG0257|consen  263 LYSALFPVHQNFVFTCPTPIQEASAAAFA  291 (420)
T ss_pred             hhhhHHHHhhccccccCcHHHHHHHHHHh
Confidence            55665555 45667788888999887765

>PRK08068 transaminase; Reviewed

Probab=100.00  E-value=1.1e-41  Score=314.06  Aligned_cols=255  Identities=23%  Similarity=0.368  Sum_probs=217.9

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~  121 (311)
                      .++++|+|+.|+|+    ++.++.+.+++.+.+.......|++..|.++||+++++++++.+|.+++++ +|++|+|+++
T Consensus        30 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~  105 (389)
T PRK08068         30 EGHDVINLGQGNPD----QPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKA  105 (389)
T ss_pred             cCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHH
Confidence            35789999999875    456778899998887655566899889999999999999998889888888 8999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~  201 (311)
                      ++..++.+++++| |.|++++|+|..|...++..|.+++.++++.+.++.+|.+++++.++++++++++++||||||.++
T Consensus       106 ~l~~~~~~~~~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~  184 (389)
T PRK08068        106 GLVELPQCLMNPG-DTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVA  184 (389)
T ss_pred             HHHHHHHHhCCCC-CEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcC
Confidence            9999999999999 999999999999999999999999999986556788999999998888899999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc-cCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV-FGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~-~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      +.+++++|+++|+++|++||+||+|+.+.|++..+.++.. .+..+++|+++||||.|++||+|+||++++.        
T Consensus       185 s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------  256 (389)
T PRK08068        185 TKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNE--------  256 (389)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCH--------
Confidence            9999999999999999999999999998887543333322 2334578999999999999999999999743        


Q ss_pred             hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++.+..... ...+++++.|.+++++|.+
T Consensus       257 ~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~  287 (389)
T PRK08068        257 SVIEAINLLQDHLFVSLFGAIQDAAIEALLS  287 (389)
T ss_pred             HHHHHHHHHHhhccCCCChHHHHHHHHHHhC
Confidence            47788777654 3345566678888877753

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=100.00  E-value=1.6e-41  Score=314.27  Aligned_cols=280  Identities=37%  Similarity=0.729  Sum_probs=232.2

Q ss_pred             hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcC
Q 021547           25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL  104 (311)
Q Consensus        25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~  104 (311)
                      ...++.++.... ... ..++++++|+.|.|..+..+++++.+.+++.+.+.......|.+..|..++|+++++++.+ .
T Consensus        13 ~~~~~~~~~~~~-~~~-~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~-~   89 (401)
T TIGR01264        13 VNPIRAIVDNMK-VKP-NPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHN-P   89 (401)
T ss_pred             hhHHHHHHHHHH-hhh-hcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhh-c
Confidence            334666554322 211 1347889999999864445788999999999988765556799989999999999999987 4


Q ss_pred             CCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC
Q 021547          105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN  184 (311)
Q Consensus       105 g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~  184 (311)
                      +..+++++|++|+|+++++.+++.+++++| |+|+++.|+|..|...++..|++++.+++..++++++|++.+++.++++
T Consensus        90 ~~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~  168 (401)
T TIGR01264        90 DGPIEADDVVLCSGCSHAIEMCIAALANAG-QNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEK  168 (401)
T ss_pred             CCCCCHHHEEECcChHHHHHHHHHHhCCCC-CEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccC
Confidence            557889999999999999999999999999 9999999999999999999999999998866667889999999988888


Q ss_pred             ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce
Q 021547          185 TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR  264 (311)
Q Consensus       185 ~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r  264 (311)
                      ++++++++|+||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+....++|+++||||.|++||+|
T Consensus       169 ~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlR  248 (401)
T TIGR01264       169 TAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWR  248 (401)
T ss_pred             ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccce
Confidence            99999999999999999999999999999999999999999999998765556666665555699999999999999999


Q ss_pred             eeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          265 FGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       265 ~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +||++++++...+  .++++.++.......++++++|.+++++|++
T Consensus       249 iG~iv~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~  292 (401)
T TIGR01264       249 LGWIIIHDRRGIL--RDIRDGLVKLSQRILGPCTIVQGALPSILLR  292 (401)
T ss_pred             EEEEEecCcchhH--HHHHHHHHHHhhccCCCCcHHHHHHHHHHHh
Confidence            9999987543111  1255555555433456789999999999864

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=100.00  E-value=1.5e-41  Score=312.76  Aligned_cols=255  Identities=24%  Similarity=0.368  Sum_probs=222.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~  121 (311)
                      .++++++|+.|+|.    +++++.+.+++.+.+......+|+++.|.+++|+++++|+++.+|+++.++ +|++|+|+++
T Consensus        27 ~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~  102 (383)
T TIGR03540        27 EGVDVISLGIGDPD----LPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKE  102 (383)
T ss_pred             cCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHH
Confidence            36899999999965    566888999998877654556899999999999999999998888888776 6999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~  201 (311)
                      ++..++.+++++| |.|+++.|+|+.|...++..|.+++.+++..++++.+|++++++.+.++++++++++|+||||.++
T Consensus       103 ~l~~~~~~~~~~g-d~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~  181 (383)
T TIGR03540       103 GIAHIPLAFVNPG-DIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVA  181 (383)
T ss_pred             HHHHHHHHhCCCC-CEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccC
Confidence            9999999999999 999999999999999999999999999987666788899999998888999999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      +.+++++|+++|++||++||+||+|..+.|++..+.++..++. ..++|+++||||.||+||+|+||++++.        
T Consensus       182 ~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~--------  253 (383)
T TIGR03540       182 PLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNA--------  253 (383)
T ss_pred             CHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCH--------
Confidence            9999999999999999999999999999887655556555543 3578999999999999999999998743        


Q ss_pred             hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++++..... ...+++.+.|.+++++|++
T Consensus       254 ~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  284 (383)
T TIGR03540       254 DLIAGLGKVKTNVDSGVFQAIQYAAIAALNG  284 (383)
T ss_pred             HHHHHHHHHHHhcccCCChHHHHHHHHHHhC
Confidence            47777776643 3456788899999998865

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=100.00  E-value=1.2e-41  Score=313.75  Aligned_cols=253  Identities=16%  Similarity=0.214  Sum_probs=214.7

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~  121 (311)
                      .+.++|+|+.|+|.    +++++.+.+++.+.+......+|++..|.++||+++++++.+.+|++++++ +|++|+|+++
T Consensus        28 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~  103 (388)
T PRK07366         28 AGKELIDLSLGSSD----LPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQE  103 (388)
T ss_pred             cCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHH
Confidence            47789999999864    677889999999887655556899989999999999999999889999998 6999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~  201 (311)
                      ++..++.+++++| |+|++++|+|+.|...++..|.+++.+++..++++.+|++++++.+.++++++++++||||||.++
T Consensus       104 al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~  182 (388)
T PRK07366        104 GTAHLPLAVLNPG-DFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIA  182 (388)
T ss_pred             HHHHHHHHhCCCC-CEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccC
Confidence            9999999999999 999999999999999999999999999987666788899999887777899999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC-CCcccccCCC-CCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTP-YIPMGVFGSI-VPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK  279 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~-~~~~~~~~~~-~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~  279 (311)
                      +.+++++|+++|++||++||+||+|..+.|++.. ..++..++.. .++|+++||||.||+||+|+||++++.       
T Consensus       183 s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~-------  255 (388)
T PRK07366        183 PLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNA-------  255 (388)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCH-------
Confidence            9999999999999999999999999999887643 4445555443 468999999999999999999999743       


Q ss_pred             hhHHHHHhhhhcc-ccCC-CchhHHHHHhhh
Q 021547          280 SGIVGSIKACLGV-RSGP-STLIQVCEMFLL  308 (311)
Q Consensus       280 ~~~~~~~~~~~~~-~~~~-~~~~q~~~~~~l  308 (311)
                       ++++++...... ..+. +.+.|.+++.+.
T Consensus       256 -~li~~l~~~~~~~~~~~~~~~~~~a~~~l~  285 (388)
T PRK07366        256 -QLIQALRQVKAVVDFNQYRGILNGAIAALT  285 (388)
T ss_pred             -HHHHHHHHHHhhcccCCCHHHHHHHHHHHh
Confidence             477887776542 2233 334455555543

>PRK06207 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.4e-41  Score=314.72  Aligned_cols=255  Identities=21%  Similarity=0.269  Sum_probs=221.4

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCMEA  122 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~a  122 (311)
                      +.+.|+|++|+|..   +++++.+.+++.+.+.......|++..|.++||+++++++++.+|+.+++ ++|++|+|++++
T Consensus        38 ~~~~i~l~~g~~~~---~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~a  114 (405)
T PRK06207         38 PGRPVDFSHGDVDA---HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGA  114 (405)
T ss_pred             CCCceecCCcCCCC---CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHH
Confidence            57889999999762   35667888888888765555689999999999999999999988988888 899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeecc---CCCCcccCHHHHHhhcCCCccEEEEeCCCCCCcc
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL---PERGWEVDLEAVEALADENTAAIVIINPCNPCGN  199 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~  199 (311)
                      +..++.+++++| |+|+++.|+|+.+...++..|.+++.++++   .+.++.+|++.|++.++++++++++++|+||||.
T Consensus       115 l~~~~~~l~~~G-d~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~  193 (405)
T PRK06207        115 LFLAVAATVARG-DKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGV  193 (405)
T ss_pred             HHHHHHHhcCCC-CEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCc
Confidence            999999999999 999999999999999999999999999875   2346889999999998888999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccc
Q 021547          200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ  278 (311)
Q Consensus       200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~  278 (311)
                      +++.+++++|+++|+++|++||+||+|..+.|++.++.++..+. ..+++|+++||||.|++||+|+||++++.      
T Consensus       194 ~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~------  267 (405)
T PRK06207        194 VYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSP------  267 (405)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCH------
Confidence            99999999999999999999999999999998776555544443 24689999999999999999999998753      


Q ss_pred             hhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          279 KSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       279 ~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                        ++++++..... ...+.+.++|.++.++|++
T Consensus       268 --~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~  298 (405)
T PRK06207        268 --AIIDRMEKLQAIVSLRAAGYSQAVLRTWFSE  298 (405)
T ss_pred             --HHHHHHHHHHhHhccCCCHHHHHHHHHHHhC
Confidence              47787777644 3456788999999999864

>PRK05942 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.3e-41  Score=312.45  Aligned_cols=255  Identities=20%  Similarity=0.322  Sum_probs=219.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~  121 (311)
                      .++++++|+.|+|.    .+.++.+.+++.+.+.......|+++.|.++||+++++|+++++|++++++ +|++|+|+++
T Consensus        33 ~g~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~  108 (394)
T PRK05942         33 QGLDLIDLGMGNPD----GAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKE  108 (394)
T ss_pred             cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHH
Confidence            46779999999875    345676777777666554556899999999999999999998888888888 4899999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~  201 (311)
                      ++..++.+++++| |+|++++|+|+.+...+...|.+++.++++.+++|.+|++++++.+.++++++++++|+||||.++
T Consensus       109 al~~~~~~~~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~  187 (394)
T PRK05942        109 GLTHLALAYVNPG-DVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATA  187 (394)
T ss_pred             HHHHHHHHhCCCC-CEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcC
Confidence            9999999999999 999999999999998889999999999986666788999999998888999999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      +.+++++|+++|+++|++||+||+|..+.+++....++..++. .+++|+++||||.|++||+|+||++++.        
T Consensus       188 s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~--------  259 (394)
T PRK05942        188 PREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNR--------  259 (394)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCH--------
Confidence            9999999999999999999999999999887655555554543 3467999999999999999999998743        


Q ss_pred             hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++.++.... ...+++.++|.++..+|+.
T Consensus       260 ~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~  290 (394)
T PRK05942        260 HIIQGLRTLKTNLDYGIFSALQKAAETALQL  290 (394)
T ss_pred             HHHHHHHHHHhhcccCCCHHHHHHHHHHHhC
Confidence            47888887653 3457788999999998863

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=100.00  E-value=4.2e-41  Score=309.94  Aligned_cols=255  Identities=25%  Similarity=0.372  Sum_probs=221.1

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~  121 (311)
                      .++++++|+.|+|.    +++++.+.+++.+.+.......|++..|.+++|+++++|+++.+|+.++++ +|++|+|+++
T Consensus        29 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~  104 (385)
T PRK09276         29 RGVDVISLGIGDPD----LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKE  104 (385)
T ss_pred             cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence            36789999999865    566788999999887654556899999999999999999998888888887 5999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~  201 (311)
                      ++..++.+++++| |+|++++|+|+.|...++..|.+++.+++..++++.+|++++++.+.++++++++++|+||||.++
T Consensus       105 ~i~~~~~~~~~~g-d~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~  183 (385)
T PRK09276        105 GIAHIPLAFVNPG-DVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVA  183 (385)
T ss_pred             HHHHHHHHhCCCC-CEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCC
Confidence            9999999999999 999999999999999999999999999986666788999999988888899999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      +.+++++|+++|++||++||+||+|..+.|++....++..++. .+++|+++||||.||+||+|+||++++.        
T Consensus       184 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~--------  255 (385)
T PRK09276        184 DLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNA--------  255 (385)
T ss_pred             CHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCH--------
Confidence            9999999999999999999999999999887655555555543 3578999999999999999999999753        


Q ss_pred             hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++.+..... ...+++.+.|.+++++|++
T Consensus       256 ~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  286 (385)
T PRK09276        256 DLIAGLGKVKSNVDSGVFQAIQEAGIAALNG  286 (385)
T ss_pred             HHHHHHHHHHhhccCCCCHHHHHHHHHHHcC
Confidence            37777776643 3456777889999988864

>PRK08960 hypothetical protein; Provisional

Probab=100.00  E-value=4.2e-41  Score=310.09  Aligned_cols=269  Identities=22%  Similarity=0.330  Sum_probs=229.0

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR  102 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~  102 (311)
                      .....+.++.....+..  ..++++++|+.|.|.    +++++.+.+++.+.+.... ..|.++.|.+++|+++++++.+
T Consensus        12 ~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~   84 (387)
T PRK08960         12 IEPFHVMALLARANELE--AAGHDVIHLEIGEPD----FTTAEPIVAAGQAALAAGH-TRYTAARGLPALREAIAGFYAQ   84 (387)
T ss_pred             CCchHHHHHHHHHHHHH--hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CccCCCCCCHHHHHHHHHHHHH
Confidence            45556666665443321  246789999999964    6678999999998887443 4798889999999999999999


Q ss_pred             cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547          103 DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD  182 (311)
Q Consensus       103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~  182 (311)
                      ++|+++++++|++|+|+++++..++.+++++| |+|++++|+|+.+...++..|.+++.++++.+.++.+|++.+++.++
T Consensus        85 ~~g~~~~~~~i~it~G~~~al~~~~~~~~~~g-d~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~  163 (387)
T PRK08960         85 RYGVDVDPERILVTPGGSGALLLASSLLVDPG-KHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN  163 (387)
T ss_pred             HhCCCCChhhEEEccCcHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC
Confidence            88999999999999999999999999999999 99999999999999999999999999998666678899999999998


Q ss_pred             CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547          183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG  262 (311)
Q Consensus       183 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G  262 (311)
                      ++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.|++. ..++...  .+++|+++||||.||++|
T Consensus       164 ~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~~--~~~vi~~~S~SK~~g~~G  240 (387)
T PRK08960        164 ADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLEV--DDDAFVLNSFSKYFGMTG  240 (387)
T ss_pred             ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhhc--cCCEEEEeecccccCCcc
Confidence            8899999999999999999999999999999999999999999999888643 3333333  458999999999999999


Q ss_pred             ceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          263 WRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       263 ~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +|+||+++++        ++++.+..... ...++|.+.|.++.+++++
T Consensus       241 lRiG~~~~~~--------~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~  281 (387)
T PRK08960        241 WRLGWLVAPP--------AAVPELEKLAQNLYISASTPAQHAALACFEP  281 (387)
T ss_pred             cEEEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhhc
Confidence            9999999864        47777776643 4567899999999888863

>PRK06290 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.3e-41  Score=312.04  Aligned_cols=253  Identities=21%  Similarity=0.357  Sum_probs=217.4

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCC-CEEEeCChH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK-LSAD-DIYITLGCM  120 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~-~~~~-~v~~t~g~~  120 (311)
                      .+.++|+|+.|+|.    +++++.+.+++.+.+.......|++ .|..+||+++++++++.+|+. ++++ +|++|+|++
T Consensus        42 ~~~~~i~L~~g~p~----~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~  116 (410)
T PRK06290         42 PDMELIDMGVGEPD----EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSK  116 (410)
T ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHH
Confidence            56789999999965    5567888998887765444456875 899999999999999888987 8886 799999999


Q ss_pred             HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547          121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV  200 (311)
Q Consensus       121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~  200 (311)
                      +++..++.+++++| |.|+++.|+|+.|...++..|.+++.++++.+.++.+|++.+++.++++++++++++|+||||.+
T Consensus       117 ~al~~~~~~~~~~g-d~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v  195 (410)
T PRK06290        117 PALAMLPSCFINPG-DVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAV  195 (410)
T ss_pred             HHHHHHHHHhCCCC-CEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcC
Confidence            99999999999999 99999999999999999999999999998766678889999999888889999999999999999


Q ss_pred             CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547          201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK  279 (311)
Q Consensus       201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~  279 (311)
                      ++.+++++|+++|++||++||+||+|..+.|++. +.++..+.. .+++|+++||||.|++||+|+||++++.       
T Consensus       196 ~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~-~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~-------  267 (410)
T PRK06290        196 ATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK-PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNE-------  267 (410)
T ss_pred             CCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC-CcChhcCCCccccEEEEeechhhcCCchhheEeEEeCH-------
Confidence            9999999999999999999999999999888653 234333332 3468999999999999999999999753       


Q ss_pred             hhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          280 SGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       280 ~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                       ++++.+..... ...+++.++|.++.++|++
T Consensus       268 -~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~  298 (410)
T PRK06290        268 -LIVKAFATVKDNNDSGQFIAIQKAGIYALDH  298 (410)
T ss_pred             -HHHHHHHHHHhccccCCcHHHHHHHHHHhhC
Confidence             37777776644 3456677899999999875

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=100.00  E-value=2.8e-41  Score=312.10  Aligned_cols=252  Identities=24%  Similarity=0.378  Sum_probs=216.3

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCC-CEEEeCChH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK-LSAD-DIYITLGCM  120 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~-~~~~-~v~~t~g~~  120 (311)
                      .++++|+|+.|+|.    +++++.+.+++.+.+.  ...+|++..|.++||+++++++++++|+. ++++ +|++|+|++
T Consensus        27 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~  100 (396)
T PRK09147         27 ADLPPISLSIGEPK----HPTPAFIKDALAANLD--GLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSR  100 (396)
T ss_pred             cCCCeEecCCCCCC----CCCCHHHHHHHHHHhh--hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChH
Confidence            57899999999965    5667889999888764  34589999999999999999999988988 8885 899999999


Q ss_pred             HHHHHHHHHHhcC---CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCC
Q 021547          121 EAVEIILTVITRL---GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC  197 (311)
Q Consensus       121 ~a~~~~~~~l~~~---g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt  197 (311)
                      +++..++.+++++   | |.|+++.|+|..|...++..|.+++.+|+..+++|.+|++.+++.+.++++++++++|||||
T Consensus       101 ~al~~~~~~l~~~~~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPT  179 (396)
T PRK09147        101 EALFAFAQTVIDRDGPG-PLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPT  179 (396)
T ss_pred             HHHHHHHHHHcCCCCCC-CEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCc
Confidence            9999999999999   8 99999999999999999999999999998766678999999988777789999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCc-ccc---cC--CCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIP-MGV---FG--SIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~-~~~---~~--~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      |.+++.+++++|+++|++||++||+||+|..+.|++. ++.+ +..   ++  ..+++|+++||||.|++||+|+||+++
T Consensus       180 G~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~  259 (396)
T PRK09147        180 GAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAG  259 (396)
T ss_pred             CccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecC
Confidence            9999999999999999999999999999999988653 2211 111   11  236899999999999999999999997


Q ss_pred             eCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          271 NDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      +.        ++++++..... ...++++++|.++.+.+.
T Consensus       260 ~~--------~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~  291 (396)
T PRK09147        260 DA--------ALLKKFLLYRTYHGCAMPPAVQAASIAAWN  291 (396)
T ss_pred             CH--------HHHHHHHHHhhhcccCCCHHHHHHHHHHhc
Confidence            53        47777776654 346788899999776664

>PRK06348 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.9e-41  Score=308.74  Aligned_cols=252  Identities=23%  Similarity=0.407  Sum_probs=217.5

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      .+++++|+.|+|.    +++++.+.+++...... ....|+++.|.+++|+++++++.+++|+.+++++|++|+|+++++
T Consensus        28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al  102 (384)
T PRK06348         28 FPDIIDLSLGDPD----LITDESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGM  102 (384)
T ss_pred             cCCcEEcCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHH
Confidence            3578999999975    45567777766555443 345899999999999999999998899999999999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      ..++.+++++| |+|+++.|+|..|...++..|.+++.++..+.+++.+|++.+++.++++++++++++|+||||.+++.
T Consensus       103 ~~~~~~~~~~g-d~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~  181 (384)
T PRK06348        103 YLALQSILDPG-DEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSK  181 (384)
T ss_pred             HHHHHHhcCCC-CEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCH
Confidence            99999999999 99999999999999999999999999987655678899999999988899999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      +++++|+++|+++|++||+||+|+++.|++ .+.++..++. .+++|+++||||.|++||+|+||+++++        ++
T Consensus       182 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~--------~~  252 (384)
T PRK06348        182 ETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPD--------YI  252 (384)
T ss_pred             HHHHHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCccccceeeecCH--------HH
Confidence            999999999999999999999999998865 3334444442 4589999999999999999999999863        47


Q ss_pred             HHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.++.... ...++++++|.+++.+|++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  281 (384)
T PRK06348        253 IETAKIINEGICFSAPTISQRAAIYALKH  281 (384)
T ss_pred             HHHHHHHHHhccCCCCHHHHHHHHHHHhC
Confidence            777777654 3467899999999988864

>PTZ00377 alanine aminotransferase; Provisional

Probab=100.00  E-value=3.2e-41  Score=318.49  Aligned_cols=261  Identities=23%  Similarity=0.371  Sum_probs=217.8

Q ss_pred             CCCCeeecCCCCCCCCCC------------CCC-------------cHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHH
Q 021547           43 DPRPVIPLGHGDPAAFPC------------FRT-------------AAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRA   95 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~------------~~~-------------~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~   95 (311)
                      .+.++|+|++|+|+-...            +..             |..+.+++.+.+...  ....|+++.|.++||++
T Consensus        44 ~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~a  123 (481)
T PTZ00377         44 PFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKA  123 (481)
T ss_pred             CcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHH
Confidence            568999999999841000            222             456777777666532  34579999999999999


Q ss_pred             HHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCH
Q 021547           96 VAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDL  174 (311)
Q Consensus        96 ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  174 (311)
                      +++++++++|+.+++++|++|+|+++++..++.+++ ++| |.|+++.|+|+.|...++..|.+++.+++..+++|.+|+
T Consensus       124 ia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~g-D~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~  202 (481)
T PTZ00377        124 VAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPS-DGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQ  202 (481)
T ss_pred             HHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCC-CEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCH
Confidence            999999989999999999999999999999999998 799 999999999999999999999999999987777889999


Q ss_pred             HHHHhhcCC------CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC-CCCCccc----ccC
Q 021547          175 EAVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS-TPYIPMG----VFG  243 (311)
Q Consensus       175 ~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~-~~~~~~~----~~~  243 (311)
                      +.|++.+++      +++++++++|+||||.+++.+++++|+++|++||++||+||+|..+.|++ .++.++.    .++
T Consensus       203 ~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~  282 (481)
T PTZ00377        203 EELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELP  282 (481)
T ss_pred             HHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhc
Confidence            999998764      78999999999999999999999999999999999999999999999853 3444432    222


Q ss_pred             CC----CCeEEEecCccc-CCCCcceeeEEEeeC-CCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          244 SI----VPVITLGSISKR-WIVPGWRFGWLATND-PNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       244 ~~----~~~i~i~s~sK~-~~~~G~r~G~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ..    .++|+++||||. +++||+|+||+++.+ +      +++++++........++++++|.+++.+|++
T Consensus       283 ~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p------~~li~~l~~~~~~~~~~~~~~Q~a~~~~l~~  349 (481)
T PTZ00377        283 AEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIP------PEVREQIYKLASINLCSNVVGQLMTGLMCNP  349 (481)
T ss_pred             ccccCCeEEEEEecCCcccccCCcCceEEEEEeCCC------HHHHHHHHHHhheecCCChHHHHHHHHHhCC
Confidence            22    368999999997 588999999998732 2      2478888777654557899999999999853

>PRK09148 aminotransferase; Validated

Probab=100.00  E-value=9.9e-41  Score=309.05  Aligned_cols=255  Identities=24%  Similarity=0.359  Sum_probs=215.8

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~  121 (311)
                      .++++|+|+.|+|.    +++++.+.+++.+.+......+|+++.|.+++|+++++++++++|+.++++ +|++|+|+++
T Consensus        28 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~  103 (405)
T PRK09148         28 AGADIIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKE  103 (405)
T ss_pred             cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH
Confidence            46789999999865    566788888888877555556899999999999999999998889888887 8999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~  201 (311)
                      ++..++.+++++| |+|++++|+|+.|...++..|.+++.+++..+.++..+++.+.+...++++++++++|+||||.++
T Consensus       104 al~~~~~~l~~~g-d~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~  182 (405)
T PRK09148        104 GFANMAQAITAPG-DVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVA  182 (405)
T ss_pred             HHHHHHHHhcCCC-CEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCC
Confidence            9999999999999 999999999999999999999999999986555544455554444456889999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      +.+++++|+++|++||++||+||+|..+.|++.++.++..++. .+++|+++||||.|++||+|+||++++.        
T Consensus       183 s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~--------  254 (405)
T PRK09148        183 DLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNE--------  254 (405)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCH--------
Confidence            9999999999999999999999999999887654445544433 3468899999999999999999999743        


Q ss_pred             hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++.+..... ...++++++|.+++.+|++
T Consensus       255 ~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~  285 (405)
T PRK09148        255 RLIAALTRVKSYLDYGAFTPIQVAATAALNG  285 (405)
T ss_pred             HHHHHHHHHHHHhccCCChHHHHHHHHHHhC
Confidence            47888877754 3467789999999999975

>PRK08636 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-40  Score=308.63  Aligned_cols=254  Identities=20%  Similarity=0.310  Sum_probs=213.6

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~  121 (311)
                      .++++++|+.|+|.    .+.++.+.+++.+.........|++..|..++|+++++|+++.+|+.++++ +|++|+|+++
T Consensus        31 ~~~~~~~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~  106 (403)
T PRK08636         31 AGEDIIDFSMGNPD----GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKE  106 (403)
T ss_pred             cCCCEEEcCCcCCC----CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHH
Confidence            36789999999876    334666777777665544456899999999999999999999889988887 7999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHH----HhhcC---CCccEEEEeCCC
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV----EALAD---ENTAAIVIINPC  194 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l----~~~l~---~~~~~i~i~~p~  194 (311)
                      ++.+++.+++++| |.|++++|+|+.+...++..|.+++.+++..++++++|++.+    +++++   .+++++++++||
T Consensus       107 al~~~~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~  185 (403)
T PRK08636        107 GYVHLVQAITNPG-DVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPH  185 (403)
T ss_pred             HHHHHHHHhCCCC-CEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCC
Confidence            9999999999999 999999999999999999999999999875455678887754    55553   478899999999


Q ss_pred             CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC-CCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI-VPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~-~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      ||||.++|.+++++|+++|++|+++||+||+|+.+.|++.++.++..++.. +++|+++||||.|++||+|+||++++. 
T Consensus       186 NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~-  264 (403)
T PRK08636        186 NPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNK-  264 (403)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCH-
Confidence            999999999999999999999999999999999998876555566665442 467889999999999999999998753 


Q ss_pred             CCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          274 NGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                             ++++.+..... ...++++++|.++..+++
T Consensus       265 -------~li~~~~~~~~~~~~~~~~~~q~~~~~~~~  294 (403)
T PRK08636        265 -------KLVGALKKIKSWLDYGMFTPIQVAATIALD  294 (403)
T ss_pred             -------HHHHHHHHHHHHhcccCChHHHHHHHHHHh
Confidence                   47777776654 245677888998887764

>PRK09265 aminotransferase AlaT; Validated

Probab=100.00  E-value=2.6e-40  Score=306.45  Aligned_cols=262  Identities=25%  Similarity=0.444  Sum_probs=220.6

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++++++|+.|+|..+ .+++++.+.+++.+.+.  ....|+++.|.++||+++++++......++++++|++|+|++++
T Consensus        31 ~~~~~i~l~~g~p~~~-~~~~~~~i~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~  107 (404)
T PRK09265         31 EGHKILKLNIGNPAPF-GFEAPDEILRDVIRNLP--TAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSEL  107 (404)
T ss_pred             cCCCeEEecCCCCCcC-CCCCCHHHHHHHHHHhh--cCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHH
Confidence            5789999999998754 36678888888887654  23589999999999999999998655557889999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+++++| |+|+++.|+|..+...++..|.+++.++.+.++++.+|.+++++.++++++++++++|+||||.+++
T Consensus       108 l~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~  186 (404)
T PRK09265        108 IVMAMQALLNNG-DEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYS  186 (404)
T ss_pred             HHHHHHHhCCCC-CEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCC
Confidence            999999999999 9999999999999999999999999888755556789999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+++|+++|++||+||+|.++.|++.++.++..++.+.++|+++||||.|++||+|+||++++.+....  +++
T Consensus       187 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~--~~~  264 (404)
T PRK09265        187 KELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHA--KGY  264 (404)
T ss_pred             HHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHH--HHH
Confidence            999999999999999999999999999887655556655555557999999999999999999999985433111  124


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.++.......++|.++|.++.++|++
T Consensus       265 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  292 (404)
T PRK09265        265 IEGLDMLASMRLCANVPAQHAIQTALGG  292 (404)
T ss_pred             HHHHHHHhccccCCCcHHHHHHHHHhcC
Confidence            5555443333467899999999998854

>PRK12414 putative aminotransferase; Provisional

Probab=100.00  E-value=3.4e-40  Score=303.64  Aligned_cols=252  Identities=21%  Similarity=0.378  Sum_probs=219.3

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCMEA  122 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~a  122 (311)
                      .+++|+|+.|.|.    +++++.+.+++.+.+... ..+|.+..|.+++|+++++++++.+|..+++ ++|++|+|++++
T Consensus        28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~a  102 (384)
T PRK12414         28 QHDALNLSQGAPN----FAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEG  102 (384)
T ss_pred             hCCeEEcCCCCCC----CCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHH
Confidence            4679999999975    567889999998877643 3579999999999999999999988887765 689999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+++.+| |+|+++.|+|..|...++..|.+++.++++. +++.+|++.+++.++++++++++++|+||||.+++
T Consensus       103 l~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s  180 (384)
T PRK12414        103 LYAAISALVHPG-DEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFS  180 (384)
T ss_pred             HHHHHHHhcCCC-CEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCC
Confidence            999999999999 9999999999999999999999999998743 45789999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      .+++++|+++|++||++||+||+|..+.|++.+..++..++. .+++|+++||||.|++||+|+||+++++        +
T Consensus       181 ~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~--------~  252 (384)
T PRK12414        181 AADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA--------E  252 (384)
T ss_pred             HHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCH--------H
Confidence            999999999999999999999999999887654445544433 4589999999999999999999999864        3


Q ss_pred             HHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          282 IVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       282 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++.+..... ...++|.++|.+++++|++
T Consensus       253 l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~  282 (384)
T PRK12414        253 LMDEIRKVHQFMVFSADTPMQHAFAEALAE  282 (384)
T ss_pred             HHHHHHHHHhheecCCCcHHHHHHHHHhcC
Confidence            7777777653 3567899999999999875

>PRK06107 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.5e-40  Score=304.58  Aligned_cols=254  Identities=24%  Similarity=0.403  Sum_probs=222.8

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .++++++|+.|.|.    +++++.+.+++.+.+.... .+|.+..|.+++|+++++++++.+|..+.+++|++|+|+++|
T Consensus        31 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a  105 (402)
T PRK06107         31 AGRSIVDLTVGEPD----FDTPDHIKQAAVAAIERGE-TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQA  105 (402)
T ss_pred             ccCCEEEcCCCCCC----CCCCHHHHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence            36789999999965    5567889999998886543 479999999999999999999888988899999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+++++| |.|+++.|+|..|...+...+..++.+++..++++.++++.+++.++++++++++++|+||||.+++
T Consensus       106 l~~~~~~~~~~g-d~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s  184 (402)
T PRK06107        106 IFLALMATLEAG-DEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYS  184 (402)
T ss_pred             HHHHHHHhcCCC-CEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcC
Confidence            999999999999 9999999999999998899998888888754567889999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHh-CCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547          203 YQHLQKIAETARKL-GILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK  279 (311)
Q Consensus       203 ~~~l~~l~~l~~~~-~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~  279 (311)
                      .+++++|+++|+++ ++++|+||+|+.+.|++.++.++..+..  .+++|+++||||.|++||+|+||++++.       
T Consensus       185 ~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~-------  257 (402)
T PRK06107        185 RAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPA-------  257 (402)
T ss_pred             HHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCH-------
Confidence            99999999999998 9999999999999887655555555533  3589999999999999999999999753       


Q ss_pred             hhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          280 SGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       280 ~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                       ++++.+..... ...+++.++|++++++|++
T Consensus       258 -~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~  288 (402)
T PRK06107        258 -DLIAAINKLQSQSSSCPSSISQAAAAAALNG  288 (402)
T ss_pred             -HHHHHHHHHHHhcccCCChHHHHHHHHHhcC
Confidence             47888887754 4578999999999999864

>PRK08361 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.4e-40  Score=303.69  Aligned_cols=277  Identities=23%  Similarity=0.399  Sum_probs=232.1

Q ss_pred             cccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCc
Q 021547           10 GFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGL   89 (311)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~   89 (311)
                      +..++++...   .....++++.+.. +     ..+++|+|+.|+|.    +++++.+.+++.+.+... ..+|.+..|.
T Consensus         7 ~~~~~~~~~~---~~~~~~~~~~~~~-~-----~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~   72 (391)
T PRK08361          7 KYFIAGRINL---IQRSKIRELFERA-S-----KMENVISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAGI   72 (391)
T ss_pred             ccchhHHHHh---CCccHHHHHHHHH-H-----hhcCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCc
Confidence            3444655555   5555666666532 1     13578999999975    556788999998887653 3479888999


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCC
Q 021547           90 PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERG  169 (311)
Q Consensus        90 ~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  169 (311)
                      ++||+++++++++.+|.++++++|++|+|+++++.+++.+++++| |+|++++|+|..+...++..|.+++.++++.+.+
T Consensus        73 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g-~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~  151 (391)
T PRK08361         73 PELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEG-DEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENE  151 (391)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCC-CEEEEcCCCCcccHHHHHHcCCEEEEEecCCccC
Confidence            999999999999888888999999999999999999999999999 9999999999999999999999999999876667


Q ss_pred             cccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeE
Q 021547          170 WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVI  249 (311)
Q Consensus       170 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i  249 (311)
                      +.+|++++++.++++++++++++|+||||.+++.+++++|+++|++++++||+||+|+.+.+++....++..++ .+++|
T Consensus       152 ~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~i  230 (391)
T PRK08361        152 FQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA-PDNTI  230 (391)
T ss_pred             CCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC-CCCEE
Confidence            88999999999988999999999999999999999999999999999999999999999888654444544443 34789


Q ss_pred             EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++|+||.|+++|+|+||++++.        ++++.+..... ...+++.+.|.++..+|++
T Consensus       231 ~~~s~SK~~~~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  284 (391)
T PRK08361        231 LANSFSKTFAMTGWRLGFVIAPE--------QVIKDMIKLHAYIIGNVASFVQIAGIEALRS  284 (391)
T ss_pred             EEecCchhcCCcHhhhhhhccCH--------HHHHHHHHHHhhhccCCChHHHHHHHHHhcC
Confidence            99999999999999999999853        36777666543 3467888999999998865

>PRK07337 aminotransferase; Validated

Probab=100.00  E-value=8.4e-40  Score=301.55  Aligned_cols=268  Identities=24%  Similarity=0.415  Sum_probs=225.4

Q ss_pred             hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhc
Q 021547           24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD  103 (311)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~  103 (311)
                      ....++++..... .+. ..++++++|+.|.|.    +++++.+.+++.+.+... ...|++..|.+++|+++++++++.
T Consensus        11 ~~~~~~~~~~~~~-~~~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~   83 (388)
T PRK07337         11 EPFYVMELAKEAQ-ALE-RAGRDIIHMGIGEPD----FTAPEPVVEAAARALRRG-VTQYTSALGLAPLREAIAAWYARR   83 (388)
T ss_pred             CchHHHHHHHHHH-HHH-hcCCCEEEeCCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHH
Confidence            3444555444332 222 246889999999965    556788899998887643 457998889999999999999998


Q ss_pred             CCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC
Q 021547          104 LPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE  183 (311)
Q Consensus       104 ~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~  183 (311)
                      +|+.+++++|++|+|+++++..++.+++++| |+|+++.|+|..+...++..|.+++.++++.++++.+|++++++.+++
T Consensus        84 ~~~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~  162 (388)
T PRK07337         84 FGLDVAPERIVVTAGASAALLLACLALVERG-DEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE  162 (388)
T ss_pred             hCCCCChHhEEEecCcHHHHHHHHHHhcCCC-CEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc
Confidence            8998999999999999999999999999999 999999999999999999999999999986666789999999999988


Q ss_pred             CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547          184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW  263 (311)
Q Consensus       184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~  263 (311)
                      +++++++++|+||||.+++.+++++|+++|+++++++|+||+|..+.+++.. .+...+  .+++|+++|+||.|++||+
T Consensus       163 ~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~~--~~~vi~~~S~SK~~~~~G~  239 (388)
T PRK07337        163 RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAP-VSALSL--GDDVITINSFSKYFNMTGW  239 (388)
T ss_pred             cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCC-cChhhc--cCCEEEEEechhhcCCchh
Confidence            9999999999999999999999999999999999999999999998876542 222222  3578999999999999999


Q ss_pred             eeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          264 RFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       264 r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      |+||+++++        ++++++..... ...++++++|.++..++++
T Consensus       240 RiG~~~~~~--------~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~  279 (388)
T PRK07337        240 RLGWLVVPE--------ALVGTFEKLAQNLFICASALAQHAALACFEP  279 (388)
T ss_pred             heeeeecCH--------HHHHHHHHHHHHhccCCChHHHHHHHHHhcc
Confidence            999999863        37777776643 3457899999999888863

>PRK07683 aminotransferase A; Validated

Probab=100.00  E-value=1.5e-39  Score=299.56  Aligned_cols=272  Identities=24%  Similarity=0.411  Sum_probs=228.0

Q ss_pred             hHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHH
Q 021547           14 KQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLAR   93 (311)
Q Consensus        14 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr   93 (311)
                      +.+.+.   .....+++.+..+ +     ..+++|+|+.|.|.    +++++.+.+++.+.+... ...|++..|..++|
T Consensus         6 ~~~~~~---~~~~~~~~~~~~~-~-----~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr   71 (387)
T PRK07683          6 NPRVKD---IQISGIRQFSNMV-Q-----NYDNLISLTIGQPD----FPTPSHVKEAAKRAITEN-YTSYTHNAGLLELR   71 (387)
T ss_pred             hHHHHh---CCccHHHHHHHHH-H-----hcCCeEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHH
Confidence            444444   5666677766532 1     13678999999965    566788999999888653 35899889999999


Q ss_pred             HHHHHHHhhcCCCCCCCC-CEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCccc
Q 021547           94 RAVAEYLNRDLPYKLSAD-DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEV  172 (311)
Q Consensus        94 ~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  172 (311)
                      +++++++++++|+.++++ +|++|+|+++++.+++.+++++| |+|+++.|+|..|...++..|++++.++.+ .+++.+
T Consensus        72 ~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~  149 (387)
T PRK07683         72 KAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPG-TEVILPAPIYPGYEPIIRLCGAKPVFIDTR-STGFRL  149 (387)
T ss_pred             HHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCC-CEEEEcCCCccchHHHHHHcCCEEEEeecC-cccCCC
Confidence            999999998889888888 99999999999999999999999 999999999999999999999999999874 356778


Q ss_pred             CHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc-CCCCCeEEE
Q 021547          173 DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITL  251 (311)
Q Consensus       173 d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~i  251 (311)
                      |.+++++.++++++++++++|+||||.+++.+++++|+++|+++|++||+||+|+.+.|++. ..++..+ +..+++|++
T Consensus       150 ~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~  228 (387)
T PRK07683        150 TAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP-HTSIAHFPEMREKTIVI  228 (387)
T ss_pred             CHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC-cCChhhccCCcCCeEEE
Confidence            89999999888899999999999999999999999999999999999999999999887653 3344444 334579999


Q ss_pred             ecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhcc-ccCCCchhHHHHHhhhhc
Q 021547          252 GSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGV-RSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       252 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~  310 (311)
                      +||||.|++||+|+||++++.        ++++++...... ..+++.++|.++.++|++
T Consensus       229 ~s~SK~~~~pGlRiG~i~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  280 (387)
T PRK07683        229 NGLSKSHSMTGWRIGFLFAPS--------YLAKHILKVHQYNVTCASSISQYAALEALTA  280 (387)
T ss_pred             eeccccccCccceeEEEEcCH--------HHHHHHHHHHHhccCCCChHHHHHHHHHHhC
Confidence            999999999999999999853        367777665432 356788999999999864

>PRK07550 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-39  Score=300.70  Aligned_cols=273  Identities=23%  Similarity=0.263  Sum_probs=228.6

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR  102 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~  102 (311)
                      ..+..++.+.+.+.+..  ..+.+.++|+.|+|.    +++++.+.+++.+.+.......|.+..|.++||+++++++++
T Consensus         9 ~~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~   82 (386)
T PRK07550          9 LFPPPIPEVRAWLAGYD--GADGPLIDLSQAVPG----YPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSR   82 (386)
T ss_pred             cCChHHHHHHHHHHHHh--hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHH
Confidence            34456666666533222  246779999999975    456788999998887655556798889999999999999999


Q ss_pred             cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547          103 DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD  182 (311)
Q Consensus       103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~  182 (311)
                      .+|..+++++|++|+|+++++..++.+++++| |+|+++.|+|..+...++..|.+++.++++.+.++.+|.+++++.++
T Consensus        83 ~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~  161 (386)
T PRK07550         83 LYGAAISPEQVHITSGCNQAFWAAMVTLAGAG-DEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT  161 (386)
T ss_pred             HhCCCCCcceEEEecCcHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc
Confidence            88988999999999999999999999999999 99999999999999999999999999998655677889999999998


Q ss_pred             CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc-CCCCCeEEEecCcccCCCC
Q 021547          183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVP  261 (311)
Q Consensus       183 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~i~s~sK~~~~~  261 (311)
                      ++++++++++|+||||.+++.+++++|+++|+++|++||+|++|+.+.+++....++... +...++|+++||||.|+++
T Consensus       162 ~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~  241 (386)
T PRK07550        162 PRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALT  241 (386)
T ss_pred             ccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCc
Confidence            899999999999999999999999999999999999999999999887654322222222 2345799999999999999


Q ss_pred             cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          262 GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       262 G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      |+|+||++++.        ++++.+..... ...++|.++|.+++++|++
T Consensus       242 G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~  283 (386)
T PRK07550        242 GHRVGAVVASP--------ARIAEIEKFMDTVAICAPRIGQIAVAWGLPN  283 (386)
T ss_pred             ccceEeeecCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHhcc
Confidence            99999999853        36777776644 4567899999999998864

>PRK08363 alanine aminotransferase; Validated

Probab=100.00  E-value=1.3e-39  Score=301.28  Aligned_cols=262  Identities=29%  Similarity=0.510  Sum_probs=218.1

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .+.++|+|+.|.|... .+++++.+.+++.+.+... ...|+++.|..+||++++++++..+|+++++++|++|+|++++
T Consensus        28 ~~~~~i~l~~g~p~~~-~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a  105 (398)
T PRK08363         28 KGIKVIRLNIGDPVKF-DFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEA  105 (398)
T ss_pred             cCCCeEEEeCCCCCcC-CCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence            4689999999998521 3677899999999887654 3479888999999999999999988999999999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +.+++.+++++| |.|+++.|+|..+...++..|.+++.++...++++.+|.+.+++.++++++++++++|+||||.+++
T Consensus       106 l~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~  184 (398)
T PRK08363        106 LQLIFGALLDPG-DEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYE  184 (398)
T ss_pred             HHHHHHHhCCCC-CEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcC
Confidence            999999999999 9999999999999999999999988884334456789999999998888999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+++|+++|++||+|++|..+.|++. +.++..++...++|+++||||.|++||+|+||+++.++....  +.+
T Consensus       185 ~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~--~~l  261 (398)
T PRK08363        185 KKTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKL--AEV  261 (398)
T ss_pred             HHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHH--HHH
Confidence            99999999999999999999999999888653 334445555668999999999999999999999983322111  112


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ...+........++|.++|.+++++|++
T Consensus       262 ~~~~~~~~~~~~~~s~~~q~~~~~~l~~  289 (398)
T PRK08363        262 REAIDKLARIRLCPNTPAQFAAIAGLTG  289 (398)
T ss_pred             HHHHHHHhcccccCChHHHHHHHHHHhC
Confidence            2333322223457899999999988864

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=100.00  E-value=9.3e-40  Score=301.69  Aligned_cols=253  Identities=24%  Similarity=0.386  Sum_probs=215.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC--CCCC-CEEEeCCh
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK--LSAD-DIYITLGC  119 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~--~~~~-~v~~t~g~  119 (311)
                      .+.++++|+.|+|.    +++++.+.+++.+.+.  ....|+++.|.+++|+++++++++.+|++  ++++ +|++|+|+
T Consensus        26 ~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga   99 (393)
T TIGR03538        26 ASKPPIALSIGEPK----HPTPAFVLEALRENLH--GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGT   99 (393)
T ss_pred             cCCCeEEecCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCc
Confidence            46899999999965    5678899999988764  34589999999999999999999988875  6775 79999999


Q ss_pred             HHHHHHHHHHHhcCCCCE--EEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCC
Q 021547          120 MEAVEIILTVITRLGAAN--ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC  197 (311)
Q Consensus       120 ~~a~~~~~~~l~~~g~d~--Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt  197 (311)
                      ++++..++.+++++| |.  |+++.|+|..|...++..|.+++.+++..++++.+|.+++++.+.++++++++++|+|||
T Consensus       100 ~~al~~~~~~l~~~g-d~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPt  178 (393)
T TIGR03538       100 REALFAFAQAVINPG-QAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPT  178 (393)
T ss_pred             HHHHHHHHHHHcCCC-CcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCc
Confidence            999999999999999 86  999999999999999999999999998666678899999998887789999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCc-ccc---c--CCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIP-MGV---F--GSIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~-~~~---~--~~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      |.+++.+++++|+++|++||++||+||+|..+.+++. ++.+ +..   .  +..+++|+++||||.|++||+|+||+++
T Consensus       179 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~  258 (393)
T TIGR03538       179 GAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAG  258 (393)
T ss_pred             CcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEec
Confidence            9999999999999999999999999999999887642 2222 111   1  1245899999999999999999999987


Q ss_pred             eCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          271 NDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +.        ++++++..... ...+++++.|.++.+.+.+
T Consensus       259 ~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  291 (393)
T TIGR03538       259 DA--------EILKAFLRYRTYHGCAMPIPTQLASIAAWND  291 (393)
T ss_pred             CH--------HHHHHHHHHHHhhccCcCHHHHHHHHHHhcC
Confidence            53        47777776654 3457788999998777643

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK08912 hypothetical protein; Provisional

Probab=100.00  E-value=2.7e-39  Score=298.11  Aligned_cols=251  Identities=25%  Similarity=0.396  Sum_probs=215.5

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEA  122 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a  122 (311)
                      ..++|+|+.|.|.    .+.++.+.+++.+.+... ..+|++..|.+++|+++++++++.+|+.++++ +|++|+|++++
T Consensus        25 ~~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~a   99 (387)
T PRK08912         25 EHGAINLGQGFPD----DPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEA   99 (387)
T ss_pred             hCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHH
Confidence            3578999999976    345677888887776543 45799999999999999999998889888998 99999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +.+++.+++++| |+|+++.|+|..|...++..|.+++.+++.+ +++.+|++.+++.++++++++++++|+||||.+++
T Consensus       100 l~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s  177 (387)
T PRK08912        100 LAAALLALVEPG-DEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFP  177 (387)
T ss_pred             HHHHHHHhcCCC-CEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccC
Confidence            999999999999 9999999999999999999999999998743 45789999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      .+++++|+++|+++|++||+||+|+.+.|++.++.++..+.. .+++|+++|+||.|+++|+|+||++++.        +
T Consensus       178 ~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~  249 (387)
T PRK08912        178 REELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAP--------P  249 (387)
T ss_pred             HHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCH--------H
Confidence            999999999999999999999999998887654445444433 4589999999999999999999999853        4


Q ss_pred             HHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          282 IVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       282 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      +++.+..... ..+++++..|.+++..|.
T Consensus       250 ~~~~l~~~~~~~~~~~~~~~q~~~~~~l~  278 (387)
T PRK08912        250 LLRVLAKAHQFLTFTTPPNLQAAVAYGLG  278 (387)
T ss_pred             HHHHHHHHHhhccccCChHHHHHHHHHHh
Confidence            7777776644 335677778888887764

>PRK07682 hypothetical protein; Validated

Probab=100.00  E-value=1e-39  Score=300.01  Aligned_cols=251  Identities=24%  Similarity=0.406  Sum_probs=217.3

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAV  123 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~  123 (311)
                      +++|+|+.|+|.    +++++.+.+++.+.+.. ...+|.+..|.+++|+++++++++.+|+.++++ +|++|+|+++++
T Consensus        20 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al   94 (378)
T PRK07682         20 EGVISLGVGEPD----FVTPWNVREASIRSLEQ-GYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL   94 (378)
T ss_pred             CCeEEeCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence            578999999975    45567788888887764 345799889999999999999999889888876 799999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      .+++.+++++| |+|++++|+|+.|...++..|.+++.++...++++.+|++.+++.+.++++++++++|+||||.+++.
T Consensus        95 ~~~~~~l~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~  173 (378)
T PRK07682         95 DVAMRAIINPG-DEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNK  173 (378)
T ss_pred             HHHHHHhCCCC-CEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCH
Confidence            99999999999 99999999999999999999999999987655678899999999998899999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      +++++|+++|++|++++|+||+|..+.|++. +.++..+.. .+++|+++||||.|++||+|+||++++.        ++
T Consensus       174 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~  244 (378)
T PRK07682        174 SELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV--------YF  244 (378)
T ss_pred             HHHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH--------HH
Confidence            9999999999999999999999999988753 333333332 3589999999999999999999999853        47


Q ss_pred             HHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.+..... ...+++.++|.+++++|++
T Consensus       245 i~~l~~~~~~~~~~~~~~~q~a~~~~l~~  273 (378)
T PRK07682        245 SEAMLKIHQYSMMCAPTMAQFAALEALRA  273 (378)
T ss_pred             HHHHHHHHHhhccCCCHHHHHHHHHHHhC
Confidence            787776643 3467889999999999865

>PRK07568 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.1e-39  Score=297.85  Aligned_cols=278  Identities=28%  Similarity=0.391  Sum_probs=226.9

Q ss_pred             chHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 021547           13 VKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLA   92 (311)
Q Consensus        13 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~l   92 (311)
                      ++++...   .....++++.....+. . ..+.++++|+.|.|.    ++.++.+.+++.+...  ....|.+..|.+++
T Consensus         3 ~~~~~~~---~~~~~~~~~~~~~~~~-~-~~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~~l   71 (397)
T PRK07568          3 ISKRVLN---MPASPIRKLVPYADEA-K-KRGIKVYHLNIGQPD----IKTPEVFFEAIKNYDE--EVLAYSHSQGIPEL   71 (397)
T ss_pred             hhhHhhh---CCcchHHHHHHHHHHH-H-hhCCCEEEecCCCCC----CCCCHHHHHHHHHHhc--CCcCcCCCCCCHHH
Confidence            3444444   3455666666543221 1 124679999999965    5567889999887653  34579999999999


Q ss_pred             HHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCccc
Q 021547           93 RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEV  172 (311)
Q Consensus        93 r~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  172 (311)
                      |+++++++. .+|+++++++|++|+|+++++..++.+++++| |+|++++|+|..+...++..|.+++.++.+.+.++..
T Consensus        72 r~~ia~~~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~  149 (397)
T PRK07568         72 REAFAKYYK-KWGIDVEPDEILITNGGSEAILFAMMAICDPG-DEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHL  149 (397)
T ss_pred             HHHHHHHHH-HhCCCCCcceEEEcCChHHHHHHHHHHhcCCC-CEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCC
Confidence            999999998 47888899999999999999999999999999 9999999999999999999999999998754445443


Q ss_pred             -CHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEE
Q 021547          173 -DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVIT  250 (311)
Q Consensus       173 -d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~  250 (311)
                       +++.+++.++++++++++++|+||||.+++.+++++|+++|+++|++||+|++|..+.|++.++.++..++. .+++|+
T Consensus       150 ~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~  229 (397)
T PRK07568        150 PSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVII  229 (397)
T ss_pred             CCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEE
Confidence             679999999889999999999999999999999999999999999999999999999887655555555544 568999


Q ss_pred             EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++|+||.|++||+|+||++++++       ++++.+........++|.++|.+++.+|++
T Consensus       230 ~~S~SK~~~~~G~R~G~~~~~~~-------~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~  282 (397)
T PRK07568        230 IDSVSKRYSACGARIGCLISKNK-------ELIAAAMKLCQARLSPPTLEQIGAAALLDT  282 (397)
T ss_pred             EecchhhccCCCcceEEEecCCH-------HHHHHHHHHhhccCCCCcHHHHHHHHHhhC
Confidence            99999999999999999998643       366666555433467899999999999864

>PLN02231 alanine transaminase

Probab=100.00  E-value=2.5e-39  Score=306.77  Aligned_cols=254  Identities=20%  Similarity=0.328  Sum_probs=210.0

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc--C-CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS--S-MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~--~-~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      .+++|+|+.+.+.    +|.  .+++...+.+..  + ....|+++.|.+++|++|++|+.+++|+++++++|++|+|++
T Consensus       128 ~p~~i~~~~~~~~----fp~--~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~  201 (534)
T PLN02231        128 HPSLLDKSETHGL----FSA--DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGAS  201 (534)
T ss_pred             CCccCCCCCcccc----CCH--HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHH
Confidence            4688888865532    332  444444455543  2 356799999999999999999999889999999999999999


Q ss_pred             HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCC
Q 021547          121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINP  193 (311)
Q Consensus       121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p  193 (311)
                      +++..++.+++. +| |.|+++.|+|+.|...++..|.+++.++++.+++|.+|+++|++.+++      +++++++++|
T Consensus       202 ~ai~~~~~~l~~~~g-d~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP  280 (534)
T PLN02231        202 PAVHMMMQLLIRSEK-DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINP  280 (534)
T ss_pred             HHHHHHHHHhccCCC-CEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCC
Confidence            999999999985 79 999999999999999999999999999987667799999999998754      6889999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC-CCCCCcccccC-------CCCCeEEEecCcccC-CCCcce
Q 021547          194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG-STPYIPMGVFG-------SIVPVITLGSISKRW-IVPGWR  264 (311)
Q Consensus       194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~-~~~~~~~~~~~-------~~~~~i~i~s~sK~~-~~~G~r  264 (311)
                      +||||.+++.+++++|+++|+++|++||+||+|..+.|+ +.++.++..+.       .+.++|+++|+||.| +++|+|
T Consensus       281 ~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlR  360 (534)
T PLN02231        281 GNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKR  360 (534)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccc
Confidence            999999999999999999999999999999999999995 44555554432       123699999999975 789999


Q ss_pred             eeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          265 FGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       265 ~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +||+++++..     +++++.+........+++.+.|.++..+++
T Consensus       361 iGy~~~~~~~-----~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~  400 (534)
T PLN02231        361 GGYMEVTGFT-----SDVREQIYKVASVNLCSNISGQILASLVMS  400 (534)
T ss_pred             eEEEEEecCC-----HHHHHHHHHHHhhhcCCChHHHHHHHHHhC
Confidence            9999875311     247777766655556778889998888875

>PRK05839 hypothetical protein; Provisional

Probab=100.00  E-value=3.7e-39  Score=295.63  Aligned_cols=249  Identities=23%  Similarity=0.341  Sum_probs=207.1

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      ++.++++|+.|+|.    +++++.+.+++.+...  ....|+++.|..+||+++++++++++|+++++++|++|+|++++
T Consensus        22 ~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~a   95 (374)
T PRK05839         22 KEYKGLDLTIGEPQ----FETPKFIQDALKNNAH--LLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREV   95 (374)
T ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHH
Confidence            36799999999965    5667888888887653  35589999999999999999999988988999999999999999


Q ss_pred             HHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547          123 VEIILTVIT--RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV  200 (311)
Q Consensus       123 ~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~  200 (311)
                      +..++.+++  ++| |.|+++.|+|+.|...++..|++++.++.+.++++.+|.++.+  + ++++++++++||||||.+
T Consensus        96 l~~~~~~~~~~~~g-d~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~  171 (374)
T PRK05839         96 LFNFPQFVLFDKQN-PTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRT  171 (374)
T ss_pred             HHHHHHHHhcCCCC-CEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCCcCcc
Confidence            999988875  478 9999999999999999999999999999866666777765432  2 468999999999999999


Q ss_pred             CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc------CCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547          201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF------GSIVPVITLGSISKRWIVPGWRFGWLATNDPN  274 (311)
Q Consensus       201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~------~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~  274 (311)
                      ++.+++++|+++|+++|++||+||+|..+.+++ ++.++...      ...+++|+++||||.|++||+|+||++++.  
T Consensus       172 ~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~--  248 (374)
T PRK05839        172 LSLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDA--  248 (374)
T ss_pred             cCHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCH--
Confidence            999999999999999999999999999976543 33332211      123589999999999999999999999842  


Q ss_pred             CccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          275 GVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       275 ~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                            +++++++.... ...+++.++|.++..++.+
T Consensus       249 ------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  279 (374)
T PRK05839        249 ------SILKKYKAYRTYLGCASPLPLQKAAAVAWLD  279 (374)
T ss_pred             ------HHHHHHHHHHhhcCCCCChHHHHHHHHHhcc
Confidence                  47788777643 3467888899998876643

>PRK06108 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.1e-39  Score=295.75  Aligned_cols=253  Identities=24%  Similarity=0.382  Sum_probs=218.4

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      .+++|+|+.|+|.    +++++.+.+++.+.+.... ..|+++.|.+++|+++++++++.+|..+++++|++|+|+++++
T Consensus        23 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al   97 (382)
T PRK06108         23 REGVLPLWFGESD----LPTPDFIRDAAAAALADGE-TFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQAL   97 (382)
T ss_pred             cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHH
Confidence            3578999999965    6778999999998876543 4699999999999999999998889888999999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC-CCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE-RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      ..++.+++++| |+|+++.|+|..+...++..|.+++.+++..+ .+|.+|++.+++.++++++++++++|+||||.+++
T Consensus        98 ~~~~~~l~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~  176 (382)
T PRK06108         98 MLAAQALVGPG-DEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTAS  176 (382)
T ss_pred             HHHHHHhcCCC-CEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccC
Confidence            99999999999 99999999999999999999999999998653 45779999999998888999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccC-CCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFG-STPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~-~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      .+++++|+++|+++|+++|+||+|+.+.++ +....++..+. ..+++|+++||||.|+++|+|+||++++.        
T Consensus       177 ~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~--------  248 (382)
T PRK06108        177 RDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP--------  248 (382)
T ss_pred             HHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH--------
Confidence            999999999999999999999999999886 33333333332 34589999999999999999999999853        


Q ss_pred             hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++.+..... ...+++++.|.++..+|++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~  279 (382)
T PRK06108        249 ALGQVLEKLIEYNTSCVAQFVQRAAVAALDE  279 (382)
T ss_pred             HHHHHHHHHHHhcccCCChHHHHHHHHHHhC
Confidence            47777766543 3467899999999988865

>PRK05957 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.3e-39  Score=295.25  Aligned_cols=252  Identities=24%  Similarity=0.297  Sum_probs=218.5

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEeCChHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLS-ADDIYITLGCMEA  122 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-~~~v~~t~g~~~a  122 (311)
                      .+++++|+.|.|.    +++++.+.+++.+.+.......|.+..|.+++|+++++++.+.+|..++ +++|++|+|++++
T Consensus        26 ~~~~~~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~  101 (389)
T PRK05957         26 NPGTISLGQGVVS----YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMA  101 (389)
T ss_pred             CCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHH
Confidence            3578999999965    5678899999998876555557999999999999999999988888777 7789999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+++++| |+|++++|+|..+...++..|++++.++.+  .++.+|++++++.++++++++++++|+||||.+++
T Consensus       102 l~~~~~~~~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~  178 (389)
T PRK05957        102 FMNAILAITDPG-DEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYP  178 (389)
T ss_pred             HHHHHHHhcCCC-CEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcC
Confidence            999999999999 999999999999988889999999999863  46789999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc-CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      .+++++|+++|+++|++||+||+|+.+.|++.+..++..+ +...++|+++||||.|++||+|+||+++++        +
T Consensus       179 ~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~  250 (389)
T PRK05957        179 EALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPI--------H  250 (389)
T ss_pred             HHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCH--------H
Confidence            9999999999999999999999999998875443333333 445589999999999999999999999853        4


Q ss_pred             HHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          282 IVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       282 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++++..... ...+++.++|.++..+|++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  280 (389)
T PRK05957        251 LLEAIKKIQDTILICPPVVSQYAALGALQV  280 (389)
T ss_pred             HHHHHHHHHhhcccCCCcHHHHHHHHHHhC
Confidence            7888887754 3467788999999988865

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=100.00  E-value=3.5e-39  Score=299.24  Aligned_cols=248  Identities=22%  Similarity=0.248  Sum_probs=203.0

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS----SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG  118 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~----~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g  118 (311)
                      .++++++|+.|+|.    +++++.+.+++.+.+..    ....+|.++.|.++||+++++++.+.+|+++++++|++|+|
T Consensus        32 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~G  107 (409)
T PRK07590         32 PEAKIIRLGIGDVT----QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDG  107 (409)
T ss_pred             CCCceEEecCcCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCC
Confidence            46789999999965    56778888988887764    24458999899999999999999888899999999999999


Q ss_pred             hHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcE-----------EEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547          119 CMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIE-----------VRHFDLLPERGWEVDLEAVEALADENTAA  187 (311)
Q Consensus       119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  187 (311)
                      +++++.+++ .++.+| |+|++++|+|+.|...++..|.+           ++.++++.++++.++.+      .+++++
T Consensus       108 a~~al~~l~-~~~~~g-d~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~------~~~~k~  179 (409)
T PRK07590        108 AKCDTGNIL-DIFGPD-NTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP------EEKVDI  179 (409)
T ss_pred             HHHHHHHHH-HhcCCC-CEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc------ccCceE
Confidence            999999865 456899 99999999999999999999987           88888754445555432      257899


Q ss_pred             EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceee
Q 021547          188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFG  266 (311)
Q Consensus       188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G  266 (311)
                      +++++|+||||.+++.+++++|+++|++||++||+||+|..+.+++..+.++..++. .+++|+++||||.|++||+|+|
T Consensus       180 i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG  259 (409)
T PRK07590        180 IYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCA  259 (409)
T ss_pred             EEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeE
Confidence            999999999999999999999999999999999999999998886644445555543 3479999999999999999999


Q ss_pred             EEEeeCCCCccchhhHHHH------------Hhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          267 WLATNDPNGVLQKSGIVGS------------IKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       267 ~i~~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      |+++++        +++++            +..... ...++|.++|.+++.++++
T Consensus       260 ~~i~~~--------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~  308 (409)
T PRK07590        260 YTVVPK--------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSP  308 (409)
T ss_pred             EEEcCH--------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcC
Confidence            999864        24441            122222 2236789999999888763

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=100.00  E-value=4.7e-40  Score=303.89  Aligned_cols=263  Identities=20%  Similarity=0.224  Sum_probs=206.7

Q ss_pred             CCCeeecCCCCCCC-CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCE--EEeCChH
Q 021547           44 PRPVIPLGHGDPAA-FPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDI--YITLGCM  120 (311)
Q Consensus        44 ~~~~i~~~~g~p~~-~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v--~~t~g~~  120 (311)
                      .+++|+|+.|.|.. ...++..+.+.+++.+.+..+...+|++..|.++||+++++|+.+..+..+++++|  ++|+|++
T Consensus        25 ~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~  104 (396)
T PRK09257         25 RPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGT  104 (396)
T ss_pred             CcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCcc
Confidence            46889999996421 01123347888998887765555589999999999999999998766655678887  9999999


Q ss_pred             HHHHHHHHHH--hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC---CCccEEEEeCCCC
Q 021547          121 EAVEIILTVI--TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD---ENTAAIVIINPCN  195 (311)
Q Consensus       121 ~a~~~~~~~l--~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~n  195 (311)
                      +++.+++.++  +++| |+|++++|+|+.|...++..|++++.+++...+++++|++.+++.++   .++.++++++|||
T Consensus       105 ~al~~~~~~l~~~~pG-d~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~N  183 (396)
T PRK09257        105 GALRVGADFLKRAFPD-AKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHN  183 (396)
T ss_pred             HHHHHHHHHHHHhCCC-CeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence            9999998776  4799 99999999999999999999999999987444567899999998765   2345666789999


Q ss_pred             CCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC-CCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEe--e
Q 021547          196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG-STPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLAT--N  271 (311)
Q Consensus       196 ptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~-~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~--~  271 (311)
                      |||.+++.+++++|+++|++||++||+||+|..+.++ +..+.++..+.. .+++|+++||||.|+++|+|+||+++  +
T Consensus       184 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~  263 (396)
T PRK09257        184 PTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAE  263 (396)
T ss_pred             CCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeC
Confidence            9999999999999999999999999999999998875 222334433332 35799999999999999999999985  2


Q ss_pred             CCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547          272 DPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++ ..  .+++.+++... ....+++.++|.+++++|++
T Consensus       264 ~~~-~~--~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  300 (396)
T PRK09257        264 DAE-EA--DRVLSQLKATIRTNYSNPPAHGAAIVATILND  300 (396)
T ss_pred             CHH-HH--HHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCC
Confidence            221 00  02445554443 33456789999999998864

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=100.00  E-value=8.3e-39  Score=295.05  Aligned_cols=250  Identities=25%  Similarity=0.443  Sum_probs=214.9

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCMEAV  123 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~a~  123 (311)
                      +++|+|+.|.|.    +++++.+.+++.+.+... ...|.+..|.+++|++++++++..+|+.+.+ ++|++|+|+++++
T Consensus        30 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al  104 (391)
T PRK07309         30 PGILKLTLGEPD----FTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEAL  104 (391)
T ss_pred             CCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence            679999999975    455788889988877643 3479988999999999999999888887764 7999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccC
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNV  200 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~  200 (311)
                      .+++.+++++| |+|++++|+|..+...++..|.+++.++.+ ..++.+|.+.+++.++.   +++++++++|+||||.+
T Consensus       105 ~~~~~~~~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~  182 (391)
T PRK07309        105 SASLTAILEPG-DKVLLPAPAYPGYEPIVNLVGAEIVEIDTT-ENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVT  182 (391)
T ss_pred             HHHHHHhcCCC-CEEEEeCCCCcchHHHHHHcCCEEEEEecC-CcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcC
Confidence            99999999999 999999999999999999999999999864 34578999999988753   68899999999999999


Q ss_pred             CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      ++.+++++|+++|++||+++|+|++|..+.|++.++.++..+. .+++|+++|+||.|++||+|+||++++.        
T Consensus       183 ~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~GlRvG~~v~~~--------  253 (391)
T PRK07309        183 YSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYL-PDQTILINGLSKSHAMTGWRIGLIFAPA--------  253 (391)
T ss_pred             cCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhc-cCCEEEEecChhhccCccceeEEEEeCH--------
Confidence            9999999999999999999999999999998665544544443 3589999999999999999999999853        


Q ss_pred             hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++.+..... ...++++++|.++.++|++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  284 (391)
T PRK07309        254 EFTAQLIKSHQYLVTAATTMAQFAAVEALTN  284 (391)
T ss_pred             HHHHHHHHHHhhcccCCChHHHHHHHHHHhC
Confidence            47777776533 3457899999999999875

>PRK05764 aspartate aminotransferase; Provisional

Probab=100.00  E-value=9.1e-39  Score=295.21  Aligned_cols=279  Identities=24%  Similarity=0.421  Sum_probs=235.3

Q ss_pred             cchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH
Q 021547           12 EVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPL   91 (311)
Q Consensus        12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~   91 (311)
                      ++|++.+.   ..++.++++..... .+.+ .++++++|+.|+|.    +++++.+.+++.+.+.... ..|.+..|..+
T Consensus         3 ~~~~~~~~---~~~~~~~~~~~~~~-~~~~-~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~   72 (393)
T PRK05764          3 KLSKRVSR---VTPSATLAVTAKAK-ELKA-QGRDVISLGAGEPD----FDTPEHIKEAAIEALDDGK-TKYTPAAGIPE   72 (393)
T ss_pred             chhhhhhh---cCchHHHHHHHHHH-HHHh-ccCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CCcCCCCChHH
Confidence            35666666   56677766665432 2222 36789999999975    5667899999988876543 36999899999


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcc
Q 021547           92 ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWE  171 (311)
Q Consensus        92 lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  171 (311)
                      ||+++++++.+.+|..+.+++|++|+|+++++..++.+++++| |.|+++.|+|..+...++..|.+++.++.+.+.++.
T Consensus        73 lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  151 (393)
T PRK05764         73 LREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPG-DEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFK  151 (393)
T ss_pred             HHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCC-CEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCc
Confidence            9999999999888888889999999999999999999999999 999999999999999999999999999986566788


Q ss_pred             cCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc--CCCCCeE
Q 021547          172 VDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF--GSIVPVI  249 (311)
Q Consensus       172 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~--~~~~~~i  249 (311)
                      +|++.+++.++++++++++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++..+.++..+  +..+++|
T Consensus       152 ~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i  231 (393)
T PRK05764        152 LTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTI  231 (393)
T ss_pred             CCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEE
Confidence            99999999998889999999999999999999999999999999999999999999988866544444443  2345899


Q ss_pred             EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      +++||||.|+++|+|+||++++.        +++++++.... ...++++++|+++.++|+
T Consensus       232 ~~~s~SK~~~~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  284 (393)
T PRK05764        232 TVNGFSKAYAMTGWRLGYAAGPK--------ELIKAMSKLQSHSTSNPTSIAQYAAVAALN  284 (393)
T ss_pred             EEecCcccccCccceeEEEecCH--------HHHHHHHHHHhhcccCCChHHHHHHHHHHc
Confidence            99999999999999999999642        47788877754 356889999999998886

>PRK07777 aminotransferase; Validated

Probab=100.00  E-value=1.3e-38  Score=293.52  Aligned_cols=253  Identities=27%  Similarity=0.443  Sum_probs=216.0

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEA  122 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a  122 (311)
                      ..++++|+.|.|+    .+.++.+.+++.+.+... ..+|.+..|.+++|+++++++.+.+|++.+++ +|++|+|++++
T Consensus        23 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~a   97 (387)
T PRK07777         23 RTGAVNLGQGFPD----EDGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEA   97 (387)
T ss_pred             hCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHH
Confidence            3588999999976    334566788877777643 35799989999999999999998889888776 79999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC-CCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE-RGWEVDLEAVEALADENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~  201 (311)
                      +.+++.+++++| |+|+++.|+|..|...++..|.+++.+++.+. .++.+|++.+++.++++++++++++|+||||.++
T Consensus        98 l~~~~~~~~~~g-d~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~  176 (387)
T PRK07777         98 IAAAVLGLVEPG-DEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVL  176 (387)
T ss_pred             HHHHHHHhcCCC-CEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccC
Confidence            999999999999 99999999999999999999999999988665 3678999999999888899999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      +.+++++|+++|+++++++|+||+|.++.|++..+.++..++. .+++|+++||||.|++||+|+||++++.        
T Consensus       177 ~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------  248 (387)
T PRK07777        177 TAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPA--------  248 (387)
T ss_pred             CHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCH--------
Confidence            9999999999999999999999999999887655555555443 4579999999999999999999999753        


Q ss_pred             hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++.+..... ...+++++.|.+++.++++
T Consensus       249 ~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  279 (387)
T PRK07777        249 PLIAAVRAAKQYLTYVGGAPFQPAVAHALDH  279 (387)
T ss_pred             HHHHHHHHHHhhcccCCCCHHHHHHHHHHhC
Confidence            36777776643 3456788889998888764

>PRK09082 methionine aminotransferase; Validated

Probab=100.00  E-value=6.2e-39  Score=295.47  Aligned_cols=251  Identities=22%  Similarity=0.321  Sum_probs=218.8

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEA  122 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a  122 (311)
                      ..++|+|+.|.|+    ++.++.+.+++.+.+... ...|.+..|.+++|+++++++.+.+|....++ +|++|+|++++
T Consensus        29 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~a  103 (386)
T PRK09082         29 EHGAINLSQGFPD----FDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEA  103 (386)
T ss_pred             hCCEEEecCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHH
Confidence            3578999999865    556788999998887643 35799989999999999999998888877765 89999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+++++| |+|+++.|+|..+...++..|.+++.++... .++.+|++.+++.++++++++++++|+||||.+++
T Consensus       104 l~~~~~~~~~~g-d~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~  181 (386)
T PRK09082        104 LFAAILALVRPG-DEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWS  181 (386)
T ss_pred             HHHHHHHHcCCC-CEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCC
Confidence            999999999999 9999999999999999999999999999753 46889999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      .+++++|+++|++||+++|+|++|+.+.|++.+..++..+.. .+++|+++||||.|+++|+|+||++++.        +
T Consensus       182 ~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~--------~  253 (386)
T PRK09082        182 AADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPA--------A  253 (386)
T ss_pred             HHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCH--------H
Confidence            999999999999999999999999999887655555544443 4689999999999999999999999853        4


Q ss_pred             HHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          282 IVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       282 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      +++.++.... ...+++.++|.+++++|+
T Consensus       254 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~  282 (386)
T PRK09082        254 LSAEFRKVHQYNTFTVNTPAQLALADYLR  282 (386)
T ss_pred             HHHHHHHHHhhhcCCCChHHHHHHHHHHh
Confidence            7788777643 356789999999999986

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=100.00  E-value=8.7e-39  Score=290.84  Aligned_cols=248  Identities=25%  Similarity=0.377  Sum_probs=211.1

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHHHH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAVE  124 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~~  124 (311)
                      .+++|+.|+|.    +++++.+.+++.+...  ....|+++.|..+||+++++++++.+|++++++ +|++|+|+++++.
T Consensus         1 ~~~~~~~g~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~   74 (350)
T TIGR03537         1 RLFDFGTGDPK----EPTPPFIRKALIDAVP--EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIF   74 (350)
T ss_pred             CeEeccCCCCC----CCCCHHHHHHHHHHHh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHH
Confidence            36899999965    6678899999988754  355899989999999999999999889999998 9999999999999


Q ss_pred             HHHHHHhcCCC--CEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          125 IILTVITRLGA--ANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       125 ~~~~~l~~~g~--d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      .++.+++++|.  |+|+++.|+|..|...++..|.+++.+++..++++.+|++.++++++++++++++++|+||||.+++
T Consensus        75 ~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~  154 (350)
T TIGR03537        75 HFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAP  154 (350)
T ss_pred             HHHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccC
Confidence            99999998761  5999999999999999999999999999865667889999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+++|+++|++||+||+|+.+.+++ +..++..++ .+++|+++|+||.||++|+|+||++++.        ++
T Consensus       155 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~~--------~~  224 (350)
T TIGR03537       155 RSYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGDE--------KL  224 (350)
T ss_pred             HHHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcC-cCCEEEEeecccccCCccccceeeecCH--------HH
Confidence            9999999999999999999999999887654 333333333 3589999999999999999999998642        47


Q ss_pred             HHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          283 VGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       283 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      ++.++.... ...++++++|.++.+.+.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~  252 (350)
T TIGR03537       225 ISFLRKLRANFGVASPDFVQAAAKAAWS  252 (350)
T ss_pred             HHHHHHHHHhhccCCCHHHHHHHHHHhC
Confidence            777776643 344566678888766654

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PTZ00376 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.7e-39  Score=300.77  Aligned_cols=278  Identities=16%  Similarity=0.186  Sum_probs=208.0

Q ss_pred             hhhHHHHHHHHHhhhccCCCCCeeecCCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhc
Q 021547           25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPA-AFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD  103 (311)
Q Consensus        25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~-~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~  103 (311)
                      ...++.+.+..    ++...+++|+|+.|.|. ..+.....+.+.+++.+....+...+|.++.|.+++|+++++|+.+.
T Consensus        13 ~~~~~~~~~~~----~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~   88 (404)
T PTZ00376         13 PDPILGLAAAF----KADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGE   88 (404)
T ss_pred             CChHHHHHHHH----hhcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCC
Confidence            34566655543    12234688999999852 21212223444555444333344568999999999999999999776


Q ss_pred             CCCCCCCCCEE--EeCChHHHHHHHHH---HHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHH
Q 021547          104 LPYKLSADDIY--ITLGCMEAVEIILT---VITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVE  178 (311)
Q Consensus       104 ~g~~~~~~~v~--~t~g~~~a~~~~~~---~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~  178 (311)
                      .+..+++++|+  .|.|+++++..++.   +++++| |+|++++|+|+.|...++..|++++.+++.+++++++|.+.++
T Consensus        89 ~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~G-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~  167 (404)
T PTZ00376         89 ASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAG-TTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGML  167 (404)
T ss_pred             CccccccCeEEEeeccCcchHHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHH
Confidence            66667888998  48999999988775   667899 9999999999999999999999999999855556899999999


Q ss_pred             hhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC--CCCcccccCC-CCCeEEEe
Q 021547          179 ALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST--PYIPMGVFGS-IVPVITLG  252 (311)
Q Consensus       179 ~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~--~~~~~~~~~~-~~~~i~i~  252 (311)
                      +.++   ++++++++++||||||.+++.+++++|+++|++|+++||+||+|..+.|++.  .+.++..+.. .+++|+++
T Consensus       168 ~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~  247 (404)
T PTZ00376        168 EDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQ  247 (404)
T ss_pred             HHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            9874   3456778899999999999999999999999999999999999999988641  2223333322 34799999


Q ss_pred             cCcccCCCCcceeeEEEe--eCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547          253 SISKRWIVPGWRFGWLAT--NDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       253 s~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ||||.|+++|+|+||+++  .+++ ..  ..+++.++... ....++++++|.+++++|++
T Consensus       248 SfSK~~~~~GlRvG~~~~~~~~~~-~~--~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  305 (404)
T PTZ00376        248 SFSKNMGLYGERIGALHIVCANKE-EA--ANVLSQLKLIIRPMYSSPPIHGARIADRILSD  305 (404)
T ss_pred             eCCCcccccccccceEEEEeCCHH-HH--HHHHHHHHHHHhhhcCCCchHHHHHHHHHhCC
Confidence            999999999999999853  2221 00  01344444432 33345688999999998865

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=5.9e-39  Score=301.29  Aligned_cols=253  Identities=22%  Similarity=0.343  Sum_probs=205.9

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc-----------CCCCCCCCCCCcHHHHHHHHHHHhhcCCC--CCCC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS-----------SMFNCYAPMFGLPLARRAVAEYLNRDLPY--KLSA  110 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~--~~~~  110 (311)
                      +.++|+|+.+.+.    ++. +.+.+.+......           .....|++..|.++||+++++++++.+|.  .+++
T Consensus        37 p~g~i~L~~~En~----l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~  111 (468)
T PLN02450         37 PSGIIQMGLAENQ----LSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDP  111 (468)
T ss_pred             CCeeEEeehhHhH----hhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcCh
Confidence            5689999999743    222 5555555443110           12345998899999999999999987774  4789


Q ss_pred             CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH-HcCcEEEEeeccCCCCcccCHHHHHhhcCC------
Q 021547          111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK-RNHIEVRHFDLLPERGWEVDLEAVEALADE------  183 (311)
Q Consensus       111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------  183 (311)
                      ++|++|+|+++++..++.+++++| |.|+++.|+|+.|...+. ..|.+++.+++..++++.++.+.+++.+.+      
T Consensus       112 ~~Iiit~Ga~~al~~l~~~l~~pG-d~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~  190 (468)
T PLN02450        112 NKLVLTAGATSANETLMFCLAEPG-DAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNL  190 (468)
T ss_pred             HHeEEccChHHHHHHHHHHhCCCC-CEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCC
Confidence            999999999999999999999999 999999999999988777 589999999886667888999999887643      


Q ss_pred             CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc---------CCCCCeEEEecC
Q 021547          184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF---------GSIVPVITLGSI  254 (311)
Q Consensus       184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~---------~~~~~~i~i~s~  254 (311)
                      +++++++++|+||||.+++.+++++|+++|+++|++||+||+|+.+.|++.++.++...         +..+++++++||
T Consensus       191 ~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~  270 (468)
T PLN02450        191 KVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSL  270 (468)
T ss_pred             CeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEec
Confidence            78999999999999999999999999999999999999999999988876544443211         134689999999


Q ss_pred             cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          255 SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       255 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ||.|++||+|+||++++++       .+++.+..... ..++|.++|.+++.+|++
T Consensus       271 SK~~~l~GlRiG~li~~~~-------~l~~~~~~~~~-~~~~s~~~Q~a~~~~L~~  318 (468)
T PLN02450        271 SKDLGLPGFRVGAIYSNDE-------MVVSAATKMSS-FGLVSSQTQYLLSALLSD  318 (468)
T ss_pred             cccCCCCCccEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhCC
Confidence            9999999999999998643       24555554433 235789999999999976

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=100.00  E-value=1.6e-38  Score=297.02  Aligned_cols=251  Identities=25%  Similarity=0.375  Sum_probs=221.8

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc--CC-CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS--SM-FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~--~~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      +.+++|+.|.|+.  .+.+.....+++.+.++.  .. ...|.++.|..+||+++++++....|+.+++++|++|+|+++
T Consensus        89 ~~~i~f~~g~p~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~  166 (459)
T COG1167          89 PSVIDFAGGLPDP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQ  166 (459)
T ss_pred             CceecCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHH
Confidence            8899999998763  355667888888887752  23 558888899999999999999988999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEe-CCCCCCcc
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVII-NPCNPCGN  199 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~-~p~nptG~  199 (311)
                      |++++++.++++| |.|++++|+|......++..|++++.+|++   ..++|+|.|++.++. ++|+++++ +.+||||.
T Consensus       167 al~l~~~~l~~pG-d~v~vE~PtY~~~~~~~~~~g~~~~~vp~d---~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~  242 (459)
T COG1167         167 ALDLLLRLLLDPG-DTVLVEDPTYPGALQALEALGARVIPVPVD---EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGV  242 (459)
T ss_pred             HHHHHHHHhCCCC-CEEEEcCCCcHHHHHHHHHcCCcEEecCCC---CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCC
Confidence            9999999999999 999999999999999999999999999885   446999999998876 57776555 44899999


Q ss_pred             CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547          200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK  279 (311)
Q Consensus       200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~  279 (311)
                      ++|.++.++|+++|++||++||+||.|+.+.|++.+..++..++..++|||++||||+ .+||+|+||++++.       
T Consensus       243 tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l~PglRlG~vv~p~-------  314 (459)
T COG1167         243 TMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVAPP-------  314 (459)
T ss_pred             ccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-cccccceeeeeCCH-------
Confidence            9999999999999999999999999999999998888788899988999999999999 69999999999974       


Q ss_pred             hhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          280 SGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       280 ~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                       .+++++.+... ....++.++|.+++..|.+
T Consensus       315 -~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~  345 (459)
T COG1167         315 -ELIEKLLRLKQAADLGPSSLSQAALAAFLLS  345 (459)
T ss_pred             -HHHHHHHHHHHHhcCCCChHHHHHHHHHHHc
Confidence             47888777744 5688999999999998874

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=1e-38  Score=297.59  Aligned_cols=287  Identities=20%  Similarity=0.310  Sum_probs=224.7

Q ss_pred             cccchHHhhHHHHhhhhhHHHHHHHHHh-hhcc-CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHh------c----
Q 021547           10 GFEVKQELNREREAEVAAFRYAIVSLME-SVDK-NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVR------S----   77 (311)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~-~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~------~----   77 (311)
                      +..+|++++.......+.+....+.... .+.. ..+.++|+|+.+..     .-....+.+.+.....      .    
T Consensus        10 ~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~g~i~l~~aeN-----~l~~d~l~~~~~~~~~~~~~~~~~~~~   84 (447)
T PLN02607         10 AVGLSKVAVSETHGEDSPYFAGWKAYDEDPYDESHNPSGVIQMGLAEN-----QVSFDLLEEYLKQHPEASSWGGKGAPG   84 (447)
T ss_pred             hhhhhhhhhhcccCCCchHHHHHHHhcCCCCCcccCCCceEEEechhh-----hhhHHHHHHHHHhCchhhccccccccc
Confidence            4456766666333344555554433333 2333 35677999999973     3345666666655432      0    


Q ss_pred             -CCCCCCCCCCCcHHHHHHHHHHHhhcCC--CCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH-
Q 021547           78 -SMFNCYAPMFGLPLARRAVAEYLNRDLP--YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK-  153 (311)
Q Consensus        78 -~~~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~-  153 (311)
                       .....|.+..|.++||+++|+++++.+|  .++++++|++|+|+++++++++.+++++| |.|+++.|+|+.|...+. 
T Consensus        85 ~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pG-D~Vlv~~P~Y~~f~~~~~~  163 (447)
T PLN02607         85 FRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPG-DALLVPTPYYPGFDRDLRW  163 (447)
T ss_pred             cchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCC-CEEEEcCCCCcchHHHHHh
Confidence             1233588888999999999999998776  36889999999999999999999999999 999999999999987766 


Q ss_pred             HcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 021547          154 RNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG  227 (311)
Q Consensus       154 ~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~  227 (311)
                      ..|.+++.++....++|.++.+.+++++++      +++++++++|+||||.+++.+++++|+++|+++|++||+||+|+
T Consensus       164 ~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa  243 (447)
T PLN02607        164 RTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYS  243 (447)
T ss_pred             cCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEecccc
Confidence            589999999886667788999999987753      78999999999999999999999999999999999999999999


Q ss_pred             CCccCCCCCCccccc----C--C-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchh
Q 021547          228 HLAFGSTPYIPMGVF----G--S-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLI  300 (311)
Q Consensus       228 ~~~~~~~~~~~~~~~----~--~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (311)
                      .+.|++.++.++..+    +  + .+++++++|+||.||++|+|+||+++.++       .++..++.... ...+|.++
T Consensus       244 ~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~-------~l~~~~~~~~~-~~~~s~~~  315 (447)
T PLN02607        244 GSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYND-------KVVTTARRMSS-FTLVSSQT  315 (447)
T ss_pred             ccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCH-------HHHHHHHHHhh-cCCCCHHH
Confidence            988876555554332    1  1 45899999999999999999999998543       36666665543 23568889


Q ss_pred             HHHHHhhhhc
Q 021547          301 QVCEMFLLVN  310 (311)
Q Consensus       301 q~~~~~~l~~  310 (311)
                      |.+++.+|++
T Consensus       316 q~~~~~~L~d  325 (447)
T PLN02607        316 QHLLASMLSD  325 (447)
T ss_pred             HHHHHHHhCC
Confidence            9999999987

>PRK07324 transaminase; Validated

Probab=100.00  E-value=1.5e-38  Score=291.36  Aligned_cols=245  Identities=22%  Similarity=0.320  Sum_probs=211.5

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .+.++++|+.|+|.    ++.++.+ +++.+++..... +|++..|.++||+++++++.     .+++++|++|+|++++
T Consensus        24 ~~~~~~~~~~~e~~----~~~~~~~-~~~~~~~~~~~~-~Y~~~~G~~~lr~~ia~~~~-----~~~~~~vi~t~G~~~a   92 (373)
T PRK07324         24 AESCIDSLTLEELL----ALAGKNP-EAFYQELGQKKL-TYGWIEGSPEFKEAVASLYQ-----NVKPENILQTNGATGA   92 (373)
T ss_pred             ccCCCCCCcHHHHH----hccCcch-HHHHHHHhcCCc-cCCCCCCCHHHHHHHHHHhc-----CCChhhEEEcCChHHH
Confidence            47899999999975    4555666 777777765544 89999999999999999985     2578899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +.+++.+++++| |+|+++.|+|..+...++..|.+++.+++..++++.+|++.+++.++++++++++++|+||||.+++
T Consensus        93 l~~~~~~l~~~g-d~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~  171 (373)
T PRK07324         93 NFLVLYALVEPG-DHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMD  171 (373)
T ss_pred             HHHHHHHhCCCC-CEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCC
Confidence            999999999999 9999999999999999999999999999877677889999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+++|++||++||+||+|..+.+++. +.++...  .+++|+++||||.|+++|+|+||++++ +       ++
T Consensus       172 ~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~--~~~~I~~~s~SK~~~~~G~RiG~i~~~-~-------~l  240 (373)
T PRK07324        172 RAYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADL--YEKGISTNSMSKTYSLPGIRVGWIAAN-E-------EV  240 (373)
T ss_pred             HHHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhc--cCCEEEEecchhhcCCccceeEEEecC-H-------HH
Confidence            99999999999999999999999999888653 3333322  347899999999999999999999984 2       47


Q ss_pred             HHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++++.... .+.+++.++|.++..+|++
T Consensus       241 i~~~~~~~~~~~~~~~~~~q~~a~~~l~~  269 (373)
T PRK07324        241 IDILRKYRDYTMICAGVFDDMLASLALEH  269 (373)
T ss_pred             HHHHHHHhCcEEecCChHHHHHHHHHHcC
Confidence            888888765 3467889999998888753

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=100.00  E-value=3.7e-38  Score=274.09  Aligned_cols=254  Identities=23%  Similarity=0.375  Sum_probs=223.3

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      ..+++.|...+    +.++++|.+++++.+.++.+.+ +|+  .+-.++.+++++|.++++++...++.|++++|...++
T Consensus        24 ~~DvlPmWVAD----MDf~~pp~i~~Al~~rvdhGvf-GY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi   96 (388)
T COG1168          24 NEDVLPMWVAD----MDFPTPPEIIEALRERVDHGVF-GYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGI   96 (388)
T ss_pred             CCCcceeeeec----ccCCCCHHHHHHHHHHHhcCCC-CCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhH
Confidence            47999999998    5699999999999999987765 787  4678899999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC-CCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCC
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP-ERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~  201 (311)
                      ..++++|.++| |.|++..|.|+++....+..|.+++..|+.. .+.|.+|.+.||+.+.+ +++++++||||||||.++
T Consensus        97 ~~~I~~~T~~g-d~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvw  175 (388)
T COG1168          97 SLAIRALTKPG-DGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVW  175 (388)
T ss_pred             HHHHHHhCcCC-CeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccc
Confidence            99999999999 9999999999999999999999999999874 45588899999998765 579999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC--CCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI--VPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK  279 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~--~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~  279 (311)
                      +.++|.+|.++|.+||+.||+||+|+.+++.|+++.++..++..  ++.|++.|.||+|+.+|+++++++.++++.   +
T Consensus       176 t~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~l---r  252 (388)
T COG1168         176 TKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNREL---R  252 (388)
T ss_pred             cHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHH---H
Confidence            99999999999999999999999999999999888888877654  689999999999999999999999988641   1


Q ss_pred             hhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          280 SGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      .++.+++++.  ....+|.++-.|...+.++
T Consensus       253 ~~~~~~l~~~--~~~~~n~lg~~A~~aAY~~  281 (388)
T COG1168         253 AKFLKRLKRN--GLHGPSALGIIATEAAYNQ  281 (388)
T ss_pred             HHHHHHHHHh--cCCCCchHHHHHHHHHHHh
Confidence            1334444433  2457888888887766543

>PRK08175 aminotransferase; Validated

Probab=100.00  E-value=1e-37  Score=288.31  Aligned_cols=252  Identities=18%  Similarity=0.323  Sum_probs=211.4

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~  121 (311)
                      .++++++|+.|+|.    ...++.+.+++.+.+.......|+++.|.+++|+++++++++.+|+.++++ ++++|+|+++
T Consensus        27 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~  102 (395)
T PRK08175         27 RGEDIIDFSMGNPD----GPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKE  102 (395)
T ss_pred             cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence            36889999999876    344667777777776555566899999999999999999998889888887 8999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC---CCccEEEEeCCCCCCc
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD---ENTAAIVIINPCNPCG  198 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG  198 (311)
                      ++..++..++++| |+|++++|+|+.+...++..|.+++.++++.+..   ..+++++.++   ++++++++++|+||||
T Consensus       103 ~l~~~~~~~~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~NPtG  178 (395)
T PRK08175        103 GLAHLMLATLDHG-DTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSNPTA  178 (395)
T ss_pred             HHHHHHHHhCCCC-CEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCCCCC
Confidence            9999999999999 9999999999999988899999999998754433   4677777665   4788999999999999


Q ss_pred             cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547          199 NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVL  277 (311)
Q Consensus       199 ~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~  277 (311)
                      .+++.+++++|+++|+++|++||+||+|..+.|++....++..++. .+++|+++||||.||+||+|+||++++.     
T Consensus       179 ~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~-----  253 (395)
T PRK08175        179 QCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNP-----  253 (395)
T ss_pred             CCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCH-----
Confidence            9999999999999999999999999999999887655555544432 3568999999999999999999998743     


Q ss_pred             chhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          278 QKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       278 ~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                         +++++++.... ...++++++|.++..+|++
T Consensus       254 ---~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  284 (395)
T PRK08175        254 ---ELVSALARIKSYHDYGTFTPLQVAAIAALEG  284 (395)
T ss_pred             ---HHHHHHHHHHhhcccCCCcHHHHHHHHHHhC
Confidence               47888777654 3456788899988888764

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=2.7e-38  Score=297.93  Aligned_cols=288  Identities=16%  Similarity=0.290  Sum_probs=218.0

Q ss_pred             cchHHhhHHHHhhhhhHHHHHHHHHhh-hccC-CCCCeeecCCCCCCCCCCCCC-cHHHHHHHHHHHh-------cCCCC
Q 021547           12 EVKQELNREREAEVAAFRYAIVSLMES-VDKN-DPRPVIPLGHGDPAAFPCFRT-AAVAEDAIVDSVR-------SSMFN   81 (311)
Q Consensus        12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~-~~~~~i~~~~g~p~~~~~~~~-~~~~~~a~~~~~~-------~~~~~   81 (311)
                      .+|+.+.-...-+++..+...+..... +... .+.++|+|+.+...+  .+.. ++.+++.....+.       -....
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN~l--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (496)
T PLN02376         11 ILSKIATNDQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQL--CLDLIKDWVKENPEASICTLEGIHQFSDIA   88 (496)
T ss_pred             hhhhhhcccccCCCCchHHHHHHHhCCCCCcccCCCceEEeecchhhh--hHHHHHHHHHhCchhhccccccccccchhh
Confidence            445444443334555666555544332 2222 345799999996321  0111 3333333222110       01233


Q ss_pred             CCCCCCCcHHHHHHHHHHHhhcCC--CCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH-HcCcE
Q 021547           82 CYAPMFGLPLARRAVAEYLNRDLP--YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK-RNHIE  158 (311)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~-~~g~~  158 (311)
                      .|.+..|.++||+++++|+++.+|  +.+++++|++|+|++++++.++.+|+++| |.|++++|+|+.|...++ ..|.+
T Consensus        89 ~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pG-D~Vlv~~P~Y~~~~~~~~~~~G~~  167 (496)
T PLN02376         89 NFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPG-DVFLIPSPYYAAFDRDLRWRTGVE  167 (496)
T ss_pred             ccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCC-CEEEECCCCccchHHHHHhhCCCE
Confidence            688889999999999999998887  56899999999999999999999999999 999999999999998777 58999


Q ss_pred             EEEeeccCCCCcccCHHHHHhhc------CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC
Q 021547          159 VRHFDLLPERGWEVDLEAVEALA------DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG  232 (311)
Q Consensus       159 ~~~~~~~~~~~~~~d~~~l~~~l------~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~  232 (311)
                      ++.+++...++++++++.+++++      ..+++++++++|+||||.+++.+++++|+++|+++|++||+||+|+.+.|+
T Consensus       168 vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~  247 (496)
T PLN02376        168 IIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFA  247 (496)
T ss_pred             EEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccC
Confidence            99999866667899999987643      247899999999999999999999999999999999999999999999887


Q ss_pred             CCCCCcccccCC--------CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHH
Q 021547          233 STPYIPMGVFGS--------IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCE  304 (311)
Q Consensus       233 ~~~~~~~~~~~~--------~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~  304 (311)
                      +.++.++..+..        ..++++++||||.|++||+|+||++++++       .+++.++.... ...+|.+.|+++
T Consensus       248 ~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~-------~l~~~~~~~~~-~~~vs~~~Q~a~  319 (496)
T PLN02376        248 GGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND-------SVVSCARKMSS-FGLVSSQTQLML  319 (496)
T ss_pred             CCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHH
Confidence            766666544411        13577899999999999999999998643       25555544443 335889999999


Q ss_pred             Hhhhhc
Q 021547          305 MFLLVN  310 (311)
Q Consensus       305 ~~~l~~  310 (311)
                      +++|++
T Consensus       320 ~~~L~d  325 (496)
T PLN02376        320 ASMLSD  325 (496)
T ss_pred             HHHhCC
Confidence            999976

>PRK06836 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.6e-37  Score=283.19  Aligned_cols=276  Identities=23%  Similarity=0.282  Sum_probs=220.1

Q ss_pred             hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhh
Q 021547           25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNR  102 (311)
Q Consensus        25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~  102 (311)
                      ...++++++....-..+.+.+++++|+.|+|.    +++++.+.+++.+.+...  ....|.+..|.+++|+++++++++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~   88 (394)
T PRK06836         13 SSWIRKMFEEGARLKAEYGADNVFDFSLGNPS----VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNR   88 (394)
T ss_pred             ccHHHHHHHHHHHHHhhcCCCCeEEecCcCCC----CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHH
Confidence            34455555432211112245788999999864    567889999998877532  245798889999999999999998


Q ss_pred             cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547          103 DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD  182 (311)
Q Consensus       103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~  182 (311)
                      .++..+++++|++|+|+++++..++.+++++| |.|++++|+|..+...++..|++++.+++++ +++.+|++++++.++
T Consensus        89 ~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~-~~~~~d~~~l~~~~~  166 (394)
T PRK06836         89 RFGTPLTADHIVMTCGAAGALNVALKAILNPG-DEVIVFAPYFVEYRFYVDNHGGKLVVVPTDT-DTFQPDLDALEAAIT  166 (394)
T ss_pred             HhCCCCCcCcEEEeCChHHHHHHHHHHhcCCC-CEEEEcCCCCccHHHHHHHcCCEEEEEecCC-ccCcCCHHHHHhhcC
Confidence            88888999999999999999999999999999 9999999999999999999999999999754 347899999999998


Q ss_pred             CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH------hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcc
Q 021547          183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARK------LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISK  256 (311)
Q Consensus       183 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~------~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK  256 (311)
                      ++++++++++|+||||.+++.+++++|+++|++      ||++||+|++|.++.+++.+...+..  ..+++|+++|+||
T Consensus       167 ~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~S~SK  244 (394)
T PRK06836        167 PKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK--YYDNSIVVYSFSK  244 (394)
T ss_pred             cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH--ccCcEEEEecchh
Confidence            899999999999999999999999999999999      89999999999999887644333222  2347999999999


Q ss_pred             cCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc--cccCCCchhHHHHHhhhhc
Q 021547          257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG--VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       257 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~  310 (311)
                      .|++||+|+||+++++..  .....++..+.....  ...+++++.|.+++.++++
T Consensus       245 ~~~~pGlRiG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  298 (394)
T PRK06836        245 SLSLPGERIGYIAVNPEM--EDADDLVAALVFANRILGFVNAPALMQRVVAKCLDA  298 (394)
T ss_pred             hccCcceeeEEEecCHHH--hhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCC
Confidence            999999999999986431  100012222222211  1246788899999998865

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=3e-38  Score=288.44  Aligned_cols=241  Identities=20%  Similarity=0.293  Sum_probs=204.8

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +..++|+|+.|.+.    +++++.+++++.+.+..  ...| ++.|..+||+++++++      ++++++|++|+|++++
T Consensus        27 ~~~~~i~l~~nen~----~~~~~~v~~a~~~~~~~--~~~Y-p~~g~~~Lr~aia~~~------~~~~~~I~vt~Gs~e~   93 (366)
T PRK01533         27 GDHSFVKLASNENP----FGCSPRVLDELQKSWLD--HALY-PDGGATTLRQTIANKL------HVKMEQVLCGSGLDEV   93 (366)
T ss_pred             CCCceEEeCCCCCC----CCCCHHHHHHHHHHHHh--cCcC-CCCCHHHHHHHHHHHh------CCCcceEEECCCHHHH
Confidence            35689999999854    78889999999877643  2246 4578999999999998      4688999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+++++| |+|+++.|+|+.|...++..|.+++.+++.   ++.+|++.+++.++++++++++++||||||.+++
T Consensus        94 i~~~~~~l~~~g-d~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~  169 (366)
T PRK01533         94 IQIISRAVLKAG-DNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVN  169 (366)
T ss_pred             HHHHHHHhcCCC-CEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcC
Confidence            999999999999 999999999999999999999999999873   4468999999988889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+++|++++ ++|+||+|..+.+.+.....+..++..+++|+++||||.|++||+|+||++++.        ++
T Consensus       170 ~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~--------~~  240 (366)
T PRK01533        170 DRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE--------EL  240 (366)
T ss_pred             HHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH--------HH
Confidence            999999999998866 677899999877654222233334455689999999999999999999999752        47


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.++.... .+++|.++|.++.++|++
T Consensus       241 ~~~l~~~~~-~~~~~~~~q~aa~~~l~~  267 (366)
T PRK01533        241 IEKLNVVRL-PFNVSSLAQKAATIAFGD  267 (366)
T ss_pred             HHHHHHhcC-CCCcCHHHHHHHHHHhCC
Confidence            888877654 478999999999999865

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=100.00  E-value=3.7e-37  Score=281.67  Aligned_cols=240  Identities=24%  Similarity=0.363  Sum_probs=198.6

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCCCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK-LSADDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~-~~~~~v~~t~g~~~  121 (311)
                      .+.++++|+.|+|.    .+.++.+.+++.....   ..+|+++.|.+++|+++++++.+.+|++ +++++|++|+|+++
T Consensus        25 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~   97 (364)
T PRK07865         25 HPDGIVDLSVGTPV----DPVPPVIQEALAAAAD---APGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKE   97 (364)
T ss_pred             cCCCEEEcCCCCCC----CCCCHHHHHHHHHHHh---hCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHH
Confidence            46679999999864    4557888888876543   2379998999999999999999988986 89999999999999


Q ss_pred             HHHHHHHHH-hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547          122 AVEIILTVI-TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV  200 (311)
Q Consensus       122 a~~~~~~~l-~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~  200 (311)
                      ++..++.++ +++| |.|+++.|+|+.|...++..|.+++.++         +.+.++   ..+++++++++|+||||.+
T Consensus        98 ~i~~~~~~l~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~---------~~~~l~---~~~~~~v~~~~p~NPtG~~  164 (364)
T PRK07865         98 LVAWLPTLLGLGPG-DVVVIPELAYPTYEVGARLAGATVVRAD---------SLTELG---PQRPALIWLNSPSNPTGRV  164 (364)
T ss_pred             HHHHHHHHHcCCCC-CEEEECCCCcccHHHHHHhcCCEEEecC---------ChhhCC---cccceEEEEcCCCCCCCcc
Confidence            999988888 7999 9999999999999999999999988774         122222   2578999999999999999


Q ss_pred             CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc---CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547          201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF---GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL  277 (311)
Q Consensus       201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~---~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~  277 (311)
                      ++.+++++|+++|+++|++||+||+|..+.+++.....+...   ...+++|+++||||.|++||+|+||++++.     
T Consensus       165 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~-----  239 (364)
T PRK07865        165 LGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDP-----  239 (364)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCH-----
Confidence            999999999999999999999999999988865332222111   123579999999999999999999998753     


Q ss_pred             chhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547          278 QKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       278 ~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~  310 (311)
                         ++++.++... ....+++.+.|.++.++|++
T Consensus       240 ---~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  270 (364)
T PRK07865        240 ---ALVAELLEVRKHAGMMVPAPVQAAMVAALGD  270 (364)
T ss_pred             ---HHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC
Confidence               4777777653 34567899999999998865

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=100.00  E-value=7.5e-37  Score=283.04  Aligned_cols=254  Identities=21%  Similarity=0.271  Sum_probs=197.3

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS----MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG  118 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g  118 (311)
                      .+.++++|+.|+|.    +++++.+.+++.+.+.+.    ....|.+..|.++||+++++++.+.   .+++++|++|+|
T Consensus        31 ~~~~~i~l~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~it~G  103 (402)
T TIGR03542        31 PSADIIRLGIGDTT----QPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFISDG  103 (402)
T ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEECCC
Confidence            46789999999864    577888999998877642    2357988899999999999987432   378899999999


Q ss_pred             hHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCc-----------EEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547          119 CMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHI-----------EVRHFDLLPERGWEVDLEAVEALADENTAA  187 (311)
Q Consensus       119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  187 (311)
                      +++++..++ .++.+| |+|+++.|+|..|...++..|.           +++.++...++++..+.+.     .+++++
T Consensus       104 a~~al~~l~-~l~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~  176 (402)
T TIGR03542       104 AKCDVFRLQ-SLFGSD-NTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDI  176 (402)
T ss_pred             cHHHHHHHH-HhcCCC-CEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceE
Confidence            999999865 455789 9999999999999999999999           8888887544455555321     257899


Q ss_pred             EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceee
Q 021547          188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFG  266 (311)
Q Consensus       188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G  266 (311)
                      +++++||||||.+++.+++++|+++|+++|++||+||+|..+.+++..+.++..++. .+++|+++||||.||+||+|+|
T Consensus       177 i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG  256 (402)
T TIGR03542       177 IYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLG  256 (402)
T ss_pred             EEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceE
Confidence            999999999999999999999999999999999999999998876543344444443 3578999999999999999999


Q ss_pred             EEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547          267 WLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       267 ~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      |++++.+........+...+... .....++|.++|.+++.++++
T Consensus       257 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~  301 (402)
T TIGR03542       257 WTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAG  301 (402)
T ss_pred             EEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcC
Confidence            99986421000000011333222 222346788999998888764

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.5e-37  Score=282.63  Aligned_cols=243  Identities=19%  Similarity=0.284  Sum_probs=203.8

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCcHHHHHHHHHHHhhcC--CCCCCCCCEEEeCChHHH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-FNCYAPMFGLPLARRAVAEYLNRDL--PYKLSADDIYITLGCMEA  122 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~--g~~~~~~~v~~t~g~~~a  122 (311)
                      .+++|+.|.|.    +++++.+.+++.+.+..+. ...|++ .|..+||+++++|+++.+  |+.+++++|++|+|++++
T Consensus        29 ~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a  103 (374)
T PRK02610         29 QLDRLDTNEFP----YDLPPDLKQKLAWLYQQGIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL  103 (374)
T ss_pred             ceeEecCCCCC----CCCCHHHHHHHHHHHhhcccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence            58999999864    7788999999998776542 346855 699999999999998876  567899999999999999


Q ss_pred             HHHHHHHHhcCCCC-EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEeCCCCCC
Q 021547          123 VEIILTVITRLGAA-NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVIINPCNPC  197 (311)
Q Consensus       123 ~~~~~~~l~~~g~d-~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~npt  197 (311)
                      +..++.+++.+| | +|+++.|+|..|...++..|++++.++++ .+++++|++++++.++    .+++++++++|||||
T Consensus       104 l~~~~~~~~~~g-~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPT  181 (374)
T PRK02610        104 IRSLLIATCLGG-EGSILVAEPTFSMYGILAQTLGIPVVRVGRD-PETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPT  181 (374)
T ss_pred             HHHHHHHHcCCC-CCeEEEcCCChHHHHHHHHHcCCEEEEecCC-cccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCC
Confidence            998888888777 6 89999999999999999999999999864 3458899999998876    488999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547          198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL  277 (311)
Q Consensus       198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~  277 (311)
                      |.+++.+++++++++|+  +++||+||+|..+.+.  .  .+..+....++|+++||||.||+||+|+||++++.     
T Consensus       182 G~~~s~~~l~~l~~~~~--~~~iI~De~Y~~~~~~--~--~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~-----  250 (374)
T PRK02610        182 GNPLTAAELEWLRSLPE--DILVVIDEAYFEFSQT--T--LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHP-----  250 (374)
T ss_pred             CCCCCHHHHHHHHhccC--CcEEEEeccccccCcc--c--hHHHHhcCCCEEEEEecchhccCcccceeeeecCH-----
Confidence            99999999999998873  9999999999987542  1  12233344578999999999999999999999743     


Q ss_pred             chhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          278 QKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                         ++++.+..... .+++|.++|.++..++++
T Consensus       251 ---~l~~~l~~~~~-~~~~~~~~q~a~~~~l~~  279 (374)
T PRK02610        251 ---ELIAVLEKVRL-PYNLPSFSQLAAQLALEH  279 (374)
T ss_pred             ---HHHHHHHHhcC-CCCCCHHHHHHHHHHhcC
Confidence               47777776653 356789999999988864

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=4.2e-37  Score=280.02  Aligned_cols=242  Identities=18%  Similarity=0.278  Sum_probs=203.2

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      ..++++|+.|.+.    .++++.+.+++.+.+.  ...+|++ .+..+||+++++++      ++++++|++|+|+++++
T Consensus        18 ~~~~~~l~~~~~~----~~~p~~~~~a~~~~~~--~~~~Y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l   84 (354)
T PRK06358         18 KNMILDFSANINP----LGVPESLKQAITENLD--KLVEYPD-PDYLELRKRIASFE------QLDLENVILGNGATELI   84 (354)
T ss_pred             ccceEEecCCCCC----CCCCHHHHHHHHHHHH--hhhcCCC-ccHHHHHHHHHHHh------CCChhhEEECCCHHHHH
Confidence            3458999998753    4567899999988764  3457865 46899999999998      46889999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      ..++.++  .+ +.|+++.|+|+.|...++..|.+++.+++..++++.+| +++.+.+..+++++++++|+||||.+++.
T Consensus        85 ~~~~~~~--~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~  160 (354)
T PRK06358         85 FNIVKVT--KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISK  160 (354)
T ss_pred             HHHHHHh--CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCH
Confidence            9999987  34 58999999999999999999999999998656677889 66666566679999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV  283 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  283 (311)
                      +++++|+++|+++|++||+||+|..+.+++.+...+..++..+++|+++||||.|++||+|+||++++++       .++
T Consensus       161 ~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~-------~~~  233 (354)
T PRK06358        161 EEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNK-------NLA  233 (354)
T ss_pred             HHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCH-------HHH
Confidence            9999999999999999999999999988764443444455567899999999999999999999998653       367


Q ss_pred             HHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          284 GSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       284 ~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +.+..... .++++.++|.++..+|++
T Consensus       234 ~~~~~~~~-~~~~~~~~q~~~~~~l~~  259 (354)
T PRK06358        234 EKLLQMRE-PWSINTFADLAGQTLLDD  259 (354)
T ss_pred             HHHHHhCC-CCcchHHHHHHHHHHhcc
Confidence            77777654 467899999999998864

>PRK09275 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.6e-37  Score=288.78  Aligned_cols=216  Identities=20%  Similarity=0.319  Sum_probs=176.8

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhc-CCCCC-C--CCCEEEeCChH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD-LPYKL-S--ADDIYITLGCM  120 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~-~g~~~-~--~~~v~~t~g~~  120 (311)
                      .++|+|+.|.|+    +++++.+.++. +.+..   .+|+++.|.+++|+++++++.++ ++... .  .++|++|+|++
T Consensus       100 ~~~i~l~~g~p~----~~~~~~v~e~~-~~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~  171 (527)
T PRK09275        100 RDAVSYVRDQLG----FDADEFVYELV-DGIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGT  171 (527)
T ss_pred             HHHHhhcCCCCC----CCCCHHHHHHH-HHHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHH
Confidence            357999999965    67788888854 44432   26999999999999999966543 33222 2  34899999999


Q ss_pred             HHHHHHHHH-----HhcCCCCEEEecCCCCcchHHHHHHcCcE--EEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC
Q 021547          121 EAVEIILTV-----ITRLGAANILLPRPGWPFYESFAKRNHIE--VRHFDLLPERGWEVDLEAVEALADENTAAIVIINP  193 (311)
Q Consensus       121 ~a~~~~~~~-----l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p  193 (311)
                      +++..++.+     ++++| |+|++++|+|+.|...++..|..  ++.++...+++|.+|.++++++++++++++++++|
T Consensus       172 ~al~~~~~aL~~~~ll~pG-D~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP  250 (527)
T PRK09275        172 AAMCYIFDSLKENGLLKAG-DKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNP  250 (527)
T ss_pred             HHHHHHHHHHhhhhcCCCC-CEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCC
Confidence            999999886     67899 99999999999999998888654  45555445567999999999999999999999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHH--hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          194 CNPCGNVLTYQHLQKIAETARK--LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       194 ~nptG~~~~~~~l~~l~~l~~~--~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      +||||.+++.+++++|+++|++  +|++||+||+|..+.+.   +.++... ...++|++.||||.|+++|||+||++++
T Consensus       251 ~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~~~~-~~~~~I~v~SfSK~f~mtG~RlG~i~~~  326 (527)
T PRK09275        251 SNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSLFAV-LPYNTILVYSFSKYFGATGWRLGVIALH  326 (527)
T ss_pred             cCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCHHHh-CCCCEEEEeehhhhccCcHhHHhhhhcC
Confidence            9999999999999999999965  49999999999997642   2333222 2358999999999999999999999987


Q ss_pred             CC
Q 021547          272 DP  273 (311)
Q Consensus       272 ~~  273 (311)
                      ..
T Consensus       327 ~~  328 (527)
T PRK09275        327 ED  328 (527)
T ss_pred             ch
Confidence            54

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=100.00  E-value=1.2e-37  Score=284.69  Aligned_cols=255  Identities=30%  Similarity=0.486  Sum_probs=214.3

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHHH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVD-SVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAV  123 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~  123 (311)
                      ++|+|+.|++......+++++..+++.+ .........|++..|.+++|+++++++++..|+..+++ +|++++|+++++
T Consensus         2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~   81 (363)
T PF00155_consen    2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL   81 (363)
T ss_dssp             TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred             CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence            6899999987643223355666666555 33445567999999999999999999997788888899 999999999999


Q ss_pred             HHHHHHH-hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCC
Q 021547          124 EIILTVI-TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNP  196 (311)
Q Consensus       124 ~~~~~~l-~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~np  196 (311)
                      ..++..+ ..+| |+|+++.|+|+.|...++..|++++.+++...+++.+|++.|++.+++      +++++++++|+||
T Consensus        82 ~~~~~~~~~~~~-~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nP  160 (363)
T PF00155_consen   82 FLLLRLLKINPG-DTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNP  160 (363)
T ss_dssp             HHHHHHHHSSTT-SEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTT
T ss_pred             hhhhhccccccc-ccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecccccc
Confidence            9999999 7899 999999999999999999999999999987778899999999998876      5789999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCC
Q 021547          197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNG  275 (311)
Q Consensus       197 tG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~  275 (311)
                      ||..++.+++++|+++|+++|++||+||+|+.+.++...+.+ ...++...++|+++|+||.||++|+|+||++++.   
T Consensus       161 tG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~---  237 (363)
T PF00155_consen  161 TGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP---  237 (363)
T ss_dssp             TTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH---
T ss_pred             cccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchh---
Confidence            999999999999999999999999999999999987543322 3444555569999999999999999999999943   


Q ss_pred             ccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          276 VLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                           ++++.++........ +.+.|.++++++.+
T Consensus       238 -----~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~  266 (363)
T PF00155_consen  238 -----ELIERLRRFQRSGLS-SSPMQAAAAAALSD  266 (363)
T ss_dssp             -----HHHHHHHHHHHHTTS-SHHHHHHHHHHHHH
T ss_pred             -----hhhhhhhhccccccc-cchhhHHHHHhhhc
Confidence                 488888888664333 88889888888764

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=100.00  E-value=8.9e-37  Score=284.99  Aligned_cols=241  Identities=18%  Similarity=0.208  Sum_probs=200.2

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE  124 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~  124 (311)
                      ..+++|+.|.|.    .+++|.+.+++.+....  ...|+++.|..+||+++++++....+   .+++|++|+|+++++.
T Consensus        85 ~~~i~L~~g~p~----~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al~  155 (431)
T PRK15481         85 TPLHDLAGGNPD----PQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAIE  155 (431)
T ss_pred             chhhhhhcCCCC----hhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHHH
Confidence            357889999864    44556677887775542  34799999999999999999976322   3469999999999999


Q ss_pred             HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEe-CCCCCCccCCCH
Q 021547          125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVII-NPCNPCGNVLTY  203 (311)
Q Consensus       125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~-~p~nptG~~~~~  203 (311)
                      .++.+++++| |.|++++|+|..|...++..|++++.++++. +  ++|++.+++++++++++++++ +||||||.+++.
T Consensus       156 ~~~~~l~~pg-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~-~--g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~  231 (431)
T PRK15481        156 RLLCAHLLPG-DSVAVEDPCFLSSINMLRYAGFSASPVSVDA-E--GMQPEKLERALAQGARAVILTPRAHNPTGCSLSA  231 (431)
T ss_pred             HHHHHhCCCC-CEEEEeCCCcHHHHHHHHHcCCeEEeeccCC-C--CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCH
Confidence            9999999999 9999999999999999999999999998742 2  489999999888788998887 999999999999


Q ss_pred             HHHHHHHHHHHHh-CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          204 QHLQKIAETARKL-GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       204 ~~l~~l~~l~~~~-~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      +++++|+++|+++ +++||+||+|..+.+++. ...+. . ..+++|+++||||.|+ ||+|+||++++.        ++
T Consensus       232 ~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~-~~~~~-~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~--------~~  299 (431)
T PRK15481        232 RRAAALRNLLARYPQVLVIIDDHFALLSSSPY-HSVIP-Q-TTQRWALIRSVSKALG-PDLRLAFVASDS--------AT  299 (431)
T ss_pred             HHHHHHHHHHHhcCCceEEecCchhhhccCCC-CCCCc-C-CCCCEEEEeeeccccC-CCceeEEEeCCH--------HH
Confidence            9999999999999 999999999999876532 12222 1 2358999999999999 999999999853        37


Q ss_pred             HHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++..... ...++|.++|.+++.+|++
T Consensus       300 ~~~~~~~~~~~~~~~s~~~q~a~~~~l~~  328 (431)
T PRK15481        300 SARLRLRLNSGTQWVSHLLQDLVYACLTD  328 (431)
T ss_pred             HHHHHHHHhccccCCCHHHHHHHHHHHhC
Confidence            777765533 3356899999999999976

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=7.5e-37  Score=280.01  Aligned_cols=244  Identities=19%  Similarity=0.285  Sum_probs=205.1

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc--CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS--SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      ..++|+.|.|.    +++++.+++++.+.+..  .....|++ .|.++||+++++|+++.+|+++++++|++|+|+++++
T Consensus        27 ~~i~l~~~~~~----~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l  101 (368)
T PRK03317         27 VPVRLNTNENP----YPPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL  101 (368)
T ss_pred             ceeEecCCCCC----CCCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence            56999999854    68899999999988753  23457865 5889999999999999889999999999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCC
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~  202 (311)
                      ..++.+++++| |.|+++.|+|..|...++..|.+++.++.  .+++++|++.+++.++ .+++++++++|+||||.+++
T Consensus       102 ~~~~~~~~~~g-d~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~  178 (368)
T PRK03317        102 QQLLQAFGGPG-RTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALP  178 (368)
T ss_pred             HHHHHHhcCCC-CEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCC
Confidence            99999999999 99999999999999999999999888765  3467899999999886 47889999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+++|   +++||+||+|..+.+++.. ..+...+..+++|+++||||.||++|+|+||++++.        ++
T Consensus       179 ~~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~--------~~  246 (368)
T PRK03317        179 LDDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP--------AV  246 (368)
T ss_pred             HHHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH--------HH
Confidence            88888887766   7999999999998766532 222222334589999999999999999999999743        47


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.+..... .+++|+++|+++.++|++
T Consensus       247 ~~~l~~~~~-~~~~s~~~~~a~~~~l~~  273 (368)
T PRK03317        247 VDALRLVRL-PYHLSAVTQAAARAALRH  273 (368)
T ss_pred             HHHHHhcCC-CCCCCHHHHHHHHHHhhC
Confidence            777776553 567899999999888864

>PLN02397 aspartate transaminase

Probab=100.00  E-value=1.9e-36  Score=281.60  Aligned_cols=279  Identities=15%  Similarity=0.143  Sum_probs=197.3

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCC-CCCCCCC-CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHH
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGD-PAAFPCF-RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL  100 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~-p~~~~~~-~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l  100 (311)
                      ...+.|+.+.+..    +....+..++|+.|. |... .. ..-+.+.+++...+..+...+|.+..|.++||+++++++
T Consensus        30 ~~~~~i~~~~~~~----~~~~~~~~l~l~~g~~p~~~-~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~  104 (423)
T PLN02397         30 APPDPILGVTEAF----LADPSPVKLNLGVGAYRTEE-GKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLA  104 (423)
T ss_pred             CCCChHHHHHHHH----hhCCCcceEecccceeeCCC-CCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHH
Confidence            3444566655432    223467889999996 4421 11 123456666555444444557999999999999999999


Q ss_pred             hhcCCCCCCCCCEEE--eCChHHH--HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHH
Q 021547          101 NRDLPYKLSADDIYI--TLGCMEA--VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA  176 (311)
Q Consensus       101 ~~~~g~~~~~~~v~~--t~g~~~a--~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  176 (311)
                      .+..+.....++|..  +.+++++  +...+..++.+| |+|++++|+|+.|...++..|.+++.+++...+++++|++.
T Consensus       105 ~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pG-d~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~  183 (423)
T PLN02397        105 YGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPG-STIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDG  183 (423)
T ss_pred             cCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCC-CEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHH
Confidence            765443333344421  2233333  444444445699 99999999999999999999999999987544557899998


Q ss_pred             HHhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC--CCCCcccccCC-CCCeEE
Q 021547          177 VEALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS--TPYIPMGVFGS-IVPVIT  250 (311)
Q Consensus       177 l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~--~~~~~~~~~~~-~~~~i~  250 (311)
                      +++.+.   ++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.|++  .++.++..+.. ..++|+
T Consensus       184 l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~  263 (423)
T PLN02397        184 LLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILV  263 (423)
T ss_pred             HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEE
Confidence            877664   467788888999999999999999999999999999999999999999864  12233333322 347999


Q ss_pred             EecCcccCCCCcceeeEEE--eeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          251 LGSISKRWIVPGWRFGWLA--TNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++||||.|+++|+|+||++  +++++ ..  ..+.+.++.... ...+++.+.|.+++++|++
T Consensus       264 ~~SfSK~~~~~G~RvG~~v~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~  323 (423)
T PLN02397        264 AQSYAKNMGLYGERVGALSVVCKSAD-VA--VRVKSQLKLIARPMYSNPPIHGASIVATILGD  323 (423)
T ss_pred             EEECcccCCCccccceEEEEEeCCHH-HH--HHHHHHHHHHHhcccCCCcHHHHHHHHHHhCC
Confidence            9999999999999999986  32221 10  013344444432 3456788999999998865

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-36  Score=276.83  Aligned_cols=240  Identities=20%  Similarity=0.346  Sum_probs=201.1

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .+.++|+|+.|++.    +++++.+.+++.+.+..  ...|++ .|.++||+++++++      ++++++|++|+|++++
T Consensus        28 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~I~it~G~~~a   94 (357)
T PRK14809         28 DPDDLVKLSSNENP----HGPSPAAVEAIREAAER--VHSYPK-ASHADLTAALADRW------DVSPEQVWLANGGDGA   94 (357)
T ss_pred             CccceeEecCCCCC----CCCCHHHHHHHHHHHhh--hhcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHH
Confidence            36789999999854    66778888998887652  447864 68999999999998      4688999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+++++| |.|++++|+|..|...++..|.+++.+++..++++.++.+.+.+.. ++++++++++|+||||.+++
T Consensus        95 l~~~~~~~~~~g-d~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s  172 (357)
T PRK14809         95 LDYLARAMLDPG-DTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIP  172 (357)
T ss_pred             HHHHHHHhcCCC-CEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCC
Confidence            999999999999 9999999999999888999999999998865567788888887765 36899999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+++|++ +++||+||+|..+.+++ .  .+..+...+++|+++||||.|++||+|+||+++++        ++
T Consensus       173 ~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~-~--~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~--------~~  240 (357)
T PRK14809        173 LDEVEALAERTDE-ETLVVVDEAYGEFAERP-S--AVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE--------EW  240 (357)
T ss_pred             HHHHHHHHHhCcc-CcEEEEechhhhccCCc-h--hHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--------HH
Confidence            9999999999875 78999999999987643 2  12223345689999999999999999999999864        37


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++..... ..+++.++|.++.++|++
T Consensus       241 ~~~~~~~~~-~~~~~~~~~~~a~~~l~~  267 (357)
T PRK14809        241 ADAYARVNT-PFAASELACRAGLAALDD  267 (357)
T ss_pred             HHHHHHhCC-CCCCCHHHHHHHHHHhCC
Confidence            777777654 457789999998888754

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=100.00  E-value=7.9e-36  Score=277.55  Aligned_cols=265  Identities=25%  Similarity=0.313  Sum_probs=201.4

Q ss_pred             hhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCcHHHHHHHHHHHh
Q 021547           26 AAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS----MFNCYAPMFGLPLARRAVAEYLN  101 (311)
Q Consensus        26 ~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~l~  101 (311)
                      ..+...+..+.+..   ..+++|+|+.|+|...  .++.+.+.+++.+.+...    ....|+++.|.++||++++++++
T Consensus        14 ~~~~~~~~~~~~~~---~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   88 (416)
T PRK09440         14 SGITQLMDDLNDGL---RTPGAIMLGGGNPAHI--PEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLN   88 (416)
T ss_pred             hcHHHHHHHHHHHh---cCCCceeccCCCCCcc--CCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHH
Confidence            34444444443333   3467899999998632  122356777777766532    33579999999999999999999


Q ss_pred             hcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-----CCCCEEEe-cCCCCcchHHHHHHcCc----EEEEeeccCCC--C
Q 021547          102 RDLPYKLSADDIYITLGCMEAVEIILTVITR-----LGAANILL-PRPGWPFYESFAKRNHI----EVRHFDLLPER--G  169 (311)
Q Consensus       102 ~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~-----~g~d~Vl~-~~p~~~~~~~~~~~~g~----~~~~~~~~~~~--~  169 (311)
                      +.+|+++++++|++|+|+++++.+++.+++.     +| |.|++ ..|+|+.|...+...+.    ....+++ ..+  +
T Consensus        89 ~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~g-d~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~-~~~~~~  166 (416)
T PRK09440         89 ERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSL-KKILFPLAPEYIGYADAGLEEDLFVSYRPNIELL-PEGQFK  166 (416)
T ss_pred             HHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCC-CeEEEecCCCchhhHHHhhccCceeecccccccc-cccccc
Confidence            9899999999999999999999999999985     58 99999 79999999876654442    2222232 222  4


Q ss_pred             cccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeE
Q 021547          170 WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVI  249 (311)
Q Consensus       170 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i  249 (311)
                      +.+|++.++  +.++++++++++||||||.+++.+++++|+++|+++|++||+||+|+.+... ........ ...+++|
T Consensus       167 ~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-~~~~~~~~-~~~~~vI  242 (416)
T PRK09440        167 YHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPG-IIFSEATP-LWNPNII  242 (416)
T ss_pred             cCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCC-cchhhcCc-cccCCeE
Confidence            678999887  3567899999999999999999999999999999999999999999853211 11111111 1146899


Q ss_pred             EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++||||. ++||+|+||++++.        ++++++..... ...++|.++|.+++++|++
T Consensus       243 ~~~SfSK~-~~pGlRiG~~i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~  295 (416)
T PRK09440        243 LCMSLSKL-GLPGVRCGIVIADE--------EIIEALSNMNGIISLAPGRLGPAIAAEMIES  295 (416)
T ss_pred             EEeccccc-CCCcceEEEEeCCH--------HHHHHHHHHHHHhccCCCcHHHHHHHHHhcc
Confidence            99999996 99999999999753        47777777654 3457899999999999875

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.3e-36  Score=277.63  Aligned_cols=240  Identities=20%  Similarity=0.282  Sum_probs=203.4

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      ..++++|+.|.+.    +++++.+.+++.+.+..  . .|.+..|.+++|+++++++      ++++++|++|+|+++++
T Consensus        28 ~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~-~~~p~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l   94 (359)
T PRK03158         28 LEKIVKLASNENP----YGPSPKVKEAIAAHLDE--L-ALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVI   94 (359)
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHHHH--h-hcCCCCcHHHHHHHHHHHh------CCCHHHEEECCCHHHHH
Confidence            4589999999864    55688899999887653  2 5666679999999999999      35778999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      ..++.+++++| |+|++++|+|+.|...+...|.+++.+++.   ++.+|++.+++.++++++++++++|+||||.+++.
T Consensus        95 ~~~~~~~~~~g-d~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~  170 (359)
T PRK03158         95 QMISRALLNPG-TNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNH  170 (359)
T ss_pred             HHHHHHHhCCC-CEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCH
Confidence            99999999999 999999999999999999999999999874   45789999999888899999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV  283 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  283 (311)
                      +++.++++.|+ +|++||+||+|..+.+++.....+...+..+++|+++||||.|+++|+|+||++++.        +++
T Consensus       171 ~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~  241 (359)
T PRK03158        171 EELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE--------ELI  241 (359)
T ss_pred             HHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH--------HHH
Confidence            98888888774 699999999999988765333333333445689999999999999999999999753        477


Q ss_pred             HHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          284 GSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       284 ~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++..... .+++|+++|.+++++|++
T Consensus       242 ~~~~~~~~-~~~~~~~~q~~~~~~l~~  267 (359)
T PRK03158        242 EKLNIARP-PFNTTRIAQYAAIAALED  267 (359)
T ss_pred             HHHHHhcC-CCCCCHHHHHHHHHHhcC
Confidence            88877655 357899999999999864

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=100.00  E-value=1.9e-35  Score=269.55  Aligned_cols=240  Identities=23%  Similarity=0.344  Sum_probs=198.5

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCCCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK-LSADDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~-~~~~~v~~t~g~~~  121 (311)
                      .++.+++|+.|+|.    .+.++.+.+++++...   ...|+++.|.++||+++++++.+++|++ +++++|++|+|+++
T Consensus        19 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~   91 (357)
T TIGR03539        19 HPDGIVDLSVGTPV----DPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKE   91 (357)
T ss_pred             CCCCeEEccCCCCC----CCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHH
Confidence            46789999999864    5567888888887653   3479999999999999999999988986 99999999999999


Q ss_pred             HHHHHHHHH-hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547          122 AVEIILTVI-TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV  200 (311)
Q Consensus       122 a~~~~~~~l-~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~  200 (311)
                      ++..++..+ +++| |.|+++.|+|+.|...++..|.+++.++         +.+.+.   .++++++++++|+||||.+
T Consensus        92 ~i~~~~~~l~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~~~~v~~~~p~NPtG~~  158 (357)
T TIGR03539        92 LVAWLPTLLGLGPG-DTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVGPDLIWLNSPGNPTGRV  158 (357)
T ss_pred             HHHHHHHHHcCCCC-CEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccCccEEEEeCCCCCcCcc
Confidence            999999888 6899 9999999999999999999999888763         222222   3578999999999999999


Q ss_pred             CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc--c-CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547          201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV--F-GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL  277 (311)
Q Consensus       201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~--~-~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~  277 (311)
                      ++.+++++|+++|+++|++||+||+|..+.|++.+...+..  . ....++|+++||||.|+++|+|+||++++.     
T Consensus       159 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~-----  233 (357)
T TIGR03539       159 LSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDP-----  233 (357)
T ss_pred             CCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCH-----
Confidence            99999999999999999999999999988876533222211  0 113479999999999999999999998642     


Q ss_pred             chhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          278 QKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       278 ~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                         ++++.+..... ...+++.++|.++.++|++
T Consensus       234 ---~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  264 (357)
T TIGR03539       234 ---ALVAELLTVRKHAGLMVPAPVQAAMVAALGD  264 (357)
T ss_pred             ---HHHHHHHHHHhhcccCCCHHHHHHHHHHcCC
Confidence               47777766543 3467899999999998864

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.2e-36  Score=276.05  Aligned_cols=243  Identities=21%  Similarity=0.340  Sum_probs=200.8

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .++++|+|+.|.|.    +.+++.+.+++.+...  ...+|++..| .++|+++++++      ++++++|++|+|++++
T Consensus        34 ~~~~~i~l~~~~~~----~~~~~~~~~al~~~~~--~~~~Y~~~~g-~~lr~~ia~~~------~~~~~~i~~t~G~~~~  100 (371)
T PRK05166         34 GVPRIAKLGSNENP----LGPSPAVRRAFADIAE--LLRLYPDPQG-RALREAIAART------GVPADRIILGNGSEDL  100 (371)
T ss_pred             CCcceEEcCCCCCC----CCCCHHHHHHHHHHHH--HhhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence            46789999999764    4567888888887543  2457998888 59999999998      3578899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+++++| |.|+++.|+|..+...++..|++++.++..  .++++|++++++.++++++++++++|+||||.+++
T Consensus       101 l~~~~~~~~~~g-d~vli~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~  177 (371)
T PRK05166        101 IAVICRAVLRPG-DRVVTLYPSFPLHEDYPTMMGARVERVTVT--PDLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLT  177 (371)
T ss_pred             HHHHHHHhcCCC-CEEEEcCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCC
Confidence            999999999999 999999999999999999999999999874  34678999999998888999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      .+++++|+++|++ +++||+||+|..+.+++..+..+..+. ..+++|+++||||.|+++|+|+||++++++       +
T Consensus       178 ~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~-------~  249 (371)
T PRK05166        178 ADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDP-------E  249 (371)
T ss_pred             HHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCH-------H
Confidence            9999999999875 899999999999886542222222222 235799999999999999999999887653       3


Q ss_pred             HHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          282 IVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++.++.... ..++|.++|.++..++.+
T Consensus       250 l~~~~~~~~~-~~~~~~~~q~~~~~~l~~  277 (371)
T PRK05166        250 LVGLLDRVRT-PFNVNGAAQAAALAALDD  277 (371)
T ss_pred             HHHHHHHhcc-CCCCCHHHHHHHHHHhcC
Confidence            7777766554 456899999887777653

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=100.00  E-value=1.6e-35  Score=277.39  Aligned_cols=216  Identities=20%  Similarity=0.308  Sum_probs=172.6

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHH-HHHhhcCCCC-CCCC--CEEEeCChH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVA-EYLNRDLPYK-LSAD--DIYITLGCM  120 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia-~~l~~~~g~~-~~~~--~v~~t~g~~  120 (311)
                      .++|+|+.|+|+    +++++.+ .++.+.....   +|+++.|..+++++++ +|+.+.++.. ...+  +|++|+|++
T Consensus        94 ~~~i~l~~g~p~----~~~~~~~-~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat  165 (521)
T TIGR03801        94 RDIISYVIDQLG----FDPDAFL-YEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGT  165 (521)
T ss_pred             HHHHhhcCCCCC----CCCCHHH-HHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHH
Confidence            457999999976    5555444 5555554322   6877677777777777 5666655433 3333  899999999


Q ss_pred             HHHHHHHHH-----HhcCCCCEEEecCCCCcchHHHHHHc--CcEEEEeeccCCCC-----cccCHHHHHhhcCCCccEE
Q 021547          121 EAVEIILTV-----ITRLGAANILLPRPGWPFYESFAKRN--HIEVRHFDLLPERG-----WEVDLEAVEALADENTAAI  188 (311)
Q Consensus       121 ~a~~~~~~~-----l~~~g~d~Vl~~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~-----~~~d~~~l~~~l~~~~~~i  188 (311)
                      +++..++.+     ++++| |+|+++.|+|++|...++..  |.+++.++.....+     |.+|.++++++++++++++
T Consensus       166 ~al~~~~~~l~~~~ll~pG-D~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai  244 (521)
T TIGR03801       166 AAMCYIFDSLKANELLKKG-DKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKAL  244 (521)
T ss_pred             HHHHHHHHHHhHhhcCCCC-CEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEE
Confidence            999999887     67899 99999999999999988776  56777777644333     8899999999888899999


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHh--CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceee
Q 021547          189 VIINPCNPCGNVLTYQHLQKIAETARKL--GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG  266 (311)
Q Consensus       189 ~i~~p~nptG~~~~~~~l~~l~~l~~~~--~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G  266 (311)
                      ++++|+||||.+++.+++++|+++|++|  |++||+||+|+.+.+   .+.++... ..+++|+++||||.|+++|||+|
T Consensus       245 ~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG  320 (521)
T TIGR03801       245 FVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAE-LPYNTIGVYSFSKYFGATGWRLG  320 (521)
T ss_pred             EEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhh-CCCCEEEEEcchhhccCchhhhh
Confidence            9999999999999999999999999987  999999999998775   22333332 23489999999999999999999


Q ss_pred             EEEeeCC
Q 021547          267 WLATNDP  273 (311)
Q Consensus       267 ~i~~~~~  273 (311)
                      |++++..
T Consensus       321 ~i~~~~~  327 (521)
T TIGR03801       321 TIALHKD  327 (521)
T ss_pred             hhhcCch
Confidence            9998653

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PRK06225 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.5e-35  Score=269.37  Aligned_cols=243  Identities=23%  Similarity=0.357  Sum_probs=206.8

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      +.++|+|+.+.+.    +++++.+.+++.+.+.......|.++.|.+++|+++++++      ++++++|++|+|+++++
T Consensus        27 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l------~~~~~~v~~~~g~t~al   96 (380)
T PRK06225         27 DKEMIWMGQNTNH----LGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL------GLDDDEALITAGATESL   96 (380)
T ss_pred             cCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc------CCCCCcEEEeCCHHHHH
Confidence            4689999999753    6788999999999987655667988889999999999998      35778999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC-CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP-ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      ..++.+++.+| |+|++++|+|..+...++..|.+++.+++.. .+++.+|++.+++.++++++++++++|+||||.+++
T Consensus        97 ~~~~~~~~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~  175 (380)
T PRK06225         97 YLVMRAFLSPG-DNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYT  175 (380)
T ss_pred             HHHHHHhcCCC-CEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCC
Confidence            99999999999 9999999999999889999999999998743 345789999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+++|+++|+++|+||+|..+..+. .  +...++ .++++++.||||.||++|+|+||++++.        ++
T Consensus       176 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~--~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~~--------~l  243 (380)
T PRK06225        176 EEEIKEFAEIARDNDAFLLHDCTYRDFAREH-T--LAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVATP--------DL  243 (380)
T ss_pred             HHHHHHHHHHHHHCCcEEEEehhHHHHhccC-C--chhhcC-CCCEEEEeechhhcCCccceeEEEecCH--------HH
Confidence            9999999999999999999999998765422 1  112222 3578999999999999999999999853        47


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++.++.......+++.++|.++...++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~a~~~l~  270 (380)
T PRK06225        244 IEVVKSIVINDLGTNVIAQEAAIAGLK  270 (380)
T ss_pred             HHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence            777776644356778899999877765

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=1.3e-35  Score=270.49  Aligned_cols=241  Identities=20%  Similarity=0.337  Sum_probs=198.0

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      ++.++++|+.|.+.    +++|+.+++++.+.+..  ...|++ .+..++|+++++++      ++++++|++|+|++++
T Consensus        18 ~~~~~i~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~   84 (356)
T PRK08056         18 SPDQLLDFSANINP----LGMPVSLKRAIIDNLDC--AERYPD-VEYRHLHQALARHH------QVPASWILAGNGETES   84 (356)
T ss_pred             ChhhEEEeccccCC----CCCCHHHHHHHHHHHHh--cccCcC-ccHHHHHHHHHHHh------CcChhhEEECCCHHHH
Confidence            36789999999754    67889999999887653  236765 46899999999998      4578999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.++ .+| + +++..|+|..|...++..|.+++.+++..++++.+| +++.+.+.++++++++++|+||||.+++
T Consensus        85 l~~~~~~l-~~g-~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~  160 (356)
T PRK08056         85 IFAVVSGL-KPR-R-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPE  160 (356)
T ss_pred             HHHHHHHh-CCC-C-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCC
Confidence            99999987 567 6 677899999999999999999999998666667777 4455556788999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+++|++++++||+||+|.++.+++..+.+.  +...+++|+++||||.|+++|+|+||++++++       ++
T Consensus       161 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~-------~~  231 (356)
T PRK08056        161 RQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LADNPHLWVLRSLTKFYAIPGLRLGYLVNSDD-------AA  231 (356)
T ss_pred             HHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hccCCCEEEEEechhhccCcchhheeeecCCH-------HH
Confidence            9999999999999999999999999987765333222  22345899999999999999999999998543       36


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.++.... .++++.++|+++..++++
T Consensus       232 ~~~l~~~~~-~~~~~~~~~~~a~~~l~~  258 (356)
T PRK08056        232 VARMRRQQM-PWSINAFAALAGEVILQD  258 (356)
T ss_pred             HHHHHHhCC-CCchhHHHHHHHHHHhCC
Confidence            677766543 457788999998888753

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=4.5e-35  Score=264.06  Aligned_cols=237  Identities=22%  Similarity=0.362  Sum_probs=206.3

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      .+++++|+.+...    +++++.+.+++.+.+.  ..+.|+++ ...++++++++++..     .++++|++++|+++.+
T Consensus        21 ~~~~i~LssNenP----~gp~~~~~~~~~~~~~--~~~rYPd~-~~~~l~~a~a~~~~~-----~~~~~V~~gnGsde~i   88 (356)
T COG0079          21 LPGIIKLSSNENP----YGPPPKVIEAIRAALD--KLNRYPDP-DYRELRAALAEYYGV-----VDPENVLVGNGSDELI   88 (356)
T ss_pred             CccceeecCCCCC----CCCCHHHHHHHHHHHH--hhccCCCC-cHHHHHHHHHHHhCC-----CCcceEEEcCChHHHH
Confidence            3469999999632    6778999999988776  45578876 789999999999952     5788999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      ..++++++.+| |+|+++.|+|..|...++..|.+++.++..+   |.+|++.+.+.+.++++++++||||||||..++.
T Consensus        89 ~~l~~~~~~~g-d~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~  164 (356)
T COG0079          89 ELLVRAFVEPG-DTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPR  164 (356)
T ss_pred             HHHHHHhhcCC-CEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCH
Confidence            99999999999 9999999999999999999999999998753   8899999999888899999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV  283 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  283 (311)
                      ++++++++.+.+ +.+||+||+|.+|.-  .....  .....+|+|+++||||.||++|+|+||++++.        +++
T Consensus       165 ~~l~~l~~~~~~-~~~vVvDEAY~eF~~--~~~~~--l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~--------~~i  231 (356)
T COG0079         165 EELRALLEALPE-GGLVVIDEAYIEFSP--ESSLE--LLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP--------ELI  231 (356)
T ss_pred             HHHHHHHHhCCC-CcEEEEeCchhhcCC--chhhh--hccCCCCEEEEEecHHhhhcchhceeeccCCH--------HHH
Confidence            999999999998 999999999999763  22222  22245579999999999999999999988743        589


Q ss_pred             HHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          284 GSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       284 ~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +.+.+.+. .+++|.++|+++.++|++
T Consensus       232 ~~l~~vr~-p~~v~~~a~~aa~aal~~  257 (356)
T COG0079         232 AALNKVRP-PFNVSSPALAAAIAALRD  257 (356)
T ss_pred             HHHHHhcC-CCCCCHHHHHHHHHHccc
Confidence            99999987 568999999999998875

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=100.00  E-value=1e-34  Score=265.15  Aligned_cols=239  Identities=15%  Similarity=0.198  Sum_probs=191.4

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +..++|+|+.+.+.    +++++.+.+++.+.+..  ...|+++ +..+||+++++++      ++++++|++|+|++++
T Consensus        20 ~~~~~i~l~~~~n~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~it~G~~~~   86 (360)
T PRK07392         20 PPDAILDFSASINP----LGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILPGNGAAEL   86 (360)
T ss_pred             CcccEEEeCCcCCC----CCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEECCCHHHH
Confidence            45678999999643    67788999998877653  4578875 5689999999999      4688999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCc---ccCHHHHHhhcCCCccEEEEeCCCCCCcc
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGW---EVDLEAVEALADENTAAIVIINPCNPCGN  199 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~d~~~l~~~l~~~~~~i~i~~p~nptG~  199 (311)
                      +.+++.++. +| |.|+++.|+|..|...++..|.+++.++++.+.++   ..+++.+++.. .+++++++++||||||.
T Consensus        87 i~~~~~~l~-~g-~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~  163 (360)
T PRK07392         87 LTWAGRELA-QL-RAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGK  163 (360)
T ss_pred             HHHHHHHhC-CC-CeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCC
Confidence            999999875 68 89999999999999999999999999998655443   34666666543 46889999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547          200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK  279 (311)
Q Consensus       200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~  279 (311)
                      +++.++   |.++++++++ +|+||+|..+.+++.....+..++..+++|+++||||.|++||+|+||++++.       
T Consensus       164 ~~~~~~---l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~-------  232 (360)
T PRK07392        164 LWSREA---ILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP-------  232 (360)
T ss_pred             CcCHHH---HHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH-------
Confidence            999555   5555667775 67799999988765332223334445689999999999999999999999853       


Q ss_pred             hhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          280 SGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                       ++++.+..... .+++|.++|.++.++|++
T Consensus       233 -~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~  261 (360)
T PRK07392        233 -DRLQRWQQWRD-PWPVNGLAAAAAIAALAD  261 (360)
T ss_pred             -HHHHHHHhhCC-CCCCCHHHHHHHHHHhcc
Confidence             36777766553 467899999999999875

>PLN02672 methionine S-methyltransferase

Probab=100.00  E-value=1e-34  Score=287.65  Aligned_cols=248  Identities=17%  Similarity=0.282  Sum_probs=203.7

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~  121 (311)
                      ++.++|+|+.|++.    +++|+.+++++.+.+...   ++  ..|.+++|+++++++.+.+|++.++ ++|++|+|+++
T Consensus       695 ~g~~vI~LsinE~d----~ppPp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~e  765 (1082)
T PLN02672        695 QESSLIHMDVDESF----LPVPSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLA  765 (1082)
T ss_pred             CCCCEEEEeCCCCC----CCCCHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHH
Confidence            46799999999964    788999999999877532   22  3467789999999999999988864 58999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCC-CCCcc
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPC-NPCGN  199 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~-nptG~  199 (311)
                      ++..++.+++++| |.|+++.|+|+.|...++..|.+++.+++..++++.+|.+.+++.+++ +.+++++++|+ ||||.
T Consensus       766 lL~lll~aLl~pG-D~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~  844 (1082)
T PLN02672        766 LFNKLVLCCVQEG-GTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGL  844 (1082)
T ss_pred             HHHHHHHHHcCCC-CEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCc
Confidence            9999999999999 999999999999999999999999999986667899999999998876 45689999997 99999


Q ss_pred             CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCC--Cccc----ccCC---CCCeEEEecCcccCCCCcceeeEEEe
Q 021547          200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPY--IPMG----VFGS---IVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~--~~~~----~~~~---~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      +++.+++++|+++|++||++||+||+|+.+.|++.+.  .++.    .++.   ..++|+++||||.|+++|+|+||+++
T Consensus       845 v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIa  924 (1082)
T PLN02672        845 LYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLAL  924 (1082)
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEe
Confidence            9999999999999999999999999999998875431  1111    1221   23799999999999999999999998


Q ss_pred             eCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhh
Q 021547          271 NDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  308 (311)
                      +++       .+++.+...... ..+...+|.+++.++
T Consensus       925 p~~-------eLi~~l~~~~~~-s~~~~~~q~Aaaaal  954 (1082)
T PLN02672        925 NDS-------VLIDAFHSAPGL-SRPHSTLKYTIKKLL  954 (1082)
T ss_pred             CCH-------HHHHHHHHhhhh-cCCCcHHHHHHHHHH
Confidence            653       377777765332 233344565555443

>PRK09105 putative aminotransferase; Provisional

Probab=100.00  E-value=8.1e-35  Score=266.32  Aligned_cols=236  Identities=20%  Similarity=0.218  Sum_probs=194.8

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      .+++++|+.|.+.    +++++.+.+++.+....  ...|+++ +..+||+++++++      ++++++|++|+|+++++
T Consensus        42 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai  108 (370)
T PRK09105         42 AEGAVFLNANECP----LGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE------GLPADHVMAYAGSSEPL  108 (370)
T ss_pred             CCCcEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh------CcChhhEEEcCChHHHH
Confidence            4678999999853    67889999999887653  2368765 4899999999987      46889999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      ..++.+++++| |+|++++|+|..|...++..|.+++.++...  ++.+|.+.+++. .++++++++++||||||.+++.
T Consensus       109 ~~~~~~l~~~g-d~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~  184 (370)
T PRK09105        109 NYAVLAFTSPT-AGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPR  184 (370)
T ss_pred             HHHHHHHcCCC-CEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCH
Confidence            99999999999 9999999999999999999999999998743  567899999876 4678999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV  283 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  283 (311)
                      ++++++++.++ ++++||+||+|..+..  .+ ......+..+++|+++||||.||++|+|+||++++.        +++
T Consensus       185 ~~l~~l~~~~~-~~~~lIvDEaY~~f~~--~~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~--------~~i  252 (370)
T PRK09105        185 ADIEWLLANKP-AGSVLLVDEAYIHFSD--AP-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP--------DLL  252 (370)
T ss_pred             HHHHHHHHhCC-CCcEEEEECchHHhcc--Cc-chHHHHhhCCCEEEEecccHhhcCCccceeeeecCH--------HHH
Confidence            99999998754 5999999999987542  11 112222335689999999999999999999999753        377


Q ss_pred             HHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          284 GSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       284 ~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++... . ...++.++|.++.++|++
T Consensus       253 ~~l~~~-~-~~~~~~~~~~aa~~~L~~  277 (370)
T PRK09105        253 AKLARF-G-HNPLPVPAAAAGLASLRD  277 (370)
T ss_pred             HHHHhc-C-CCCcCHHHHHHHHHHHhC
Confidence            777766 2 345788888888887764

>PRK03321 putative aminotransferase; Provisional

Probab=100.00  E-value=4.7e-35  Score=266.57  Aligned_cols=239  Identities=20%  Similarity=0.292  Sum_probs=200.6

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE  124 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~  124 (311)
                      +.+|+|+.+.+.    +++++.+.+++.+.+.  ....|+ ..|..++|++++++++      +++++|++|+|+++++.
T Consensus        22 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~y~-~~g~~~lr~~ia~~~~------~~~~~I~~~~G~~~~l~   88 (352)
T PRK03321         22 PGAIKLSSNETP----FGPLPSVRAAIARAAA--GVNRYP-DMGAVELRAALAEHLG------VPPEHVAVGCGSVALCQ   88 (352)
T ss_pred             ccceeccCCCCC----CCCCHHHHHHHHHHHH--hcCcCC-CCcHHHHHHHHHHHhC------cCHHHEEECCCHHHHHH
Confidence            578999999865    5667889999988765  234675 4799999999999994      57789999999999999


Q ss_pred             HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547          125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ  204 (311)
Q Consensus       125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~  204 (311)
                      .++..++++| |+|+++.|+|..|...++..|.+++.++..+  ++.++++.+++.++++++++++++|+||||.+++.+
T Consensus        89 ~~~~~~~~~g-d~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~  165 (352)
T PRK03321         89 QLVQATAGPG-DEVIFAWRSFEAYPILVQVAGATPVQVPLTP--DHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPA  165 (352)
T ss_pred             HHHHHhcCCC-CEEEeCCCCHHHHHHHHHHcCCEEEEccCCC--CCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHH
Confidence            9999999999 9999999999999999999999999998753  367899999999988999999999999999999988


Q ss_pred             HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHH
Q 021547          205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVG  284 (311)
Q Consensus       205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  284 (311)
                      ++.++++.+ +++++||+||+|..+.+++....++..++..+++++++||||.|++||+|+||++++.        ++++
T Consensus       166 ~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~  236 (352)
T PRK03321        166 ELARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP--------EVIA  236 (352)
T ss_pred             HHHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH--------HHHH
Confidence            777777765 4699999999999988865433344444455689999999999999999999999853        4788


Q ss_pred             HHhhhhccccCCCchhHHHHHhhhh
Q 021547          285 SIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       285 ~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .+..... ..++|.++|.++.+.|+
T Consensus       237 ~~~~~~~-~~~~s~~~q~~a~~~l~  260 (352)
T PRK03321        237 ALRKVAV-PFSVNSLAQAAAIASLA  260 (352)
T ss_pred             HHHHhcC-CCCCCHHHHHHHHHHhc
Confidence            8776643 56789999998877764

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.1e-34  Score=262.07  Aligned_cols=237  Identities=20%  Similarity=0.329  Sum_probs=195.8

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      .+..++|+.|.+.    +++|+.+.+++.+.+.......|++. +..++|+++++++      ++++++|++|+|+++++
T Consensus        21 ~~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~G~~~~l   89 (351)
T PRK14807         21 IPYKYKMDANETP----FELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC------SVVPTNIFVGNGSDEII   89 (351)
T ss_pred             CCceeEccCCCCC----CCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh------CCCcccEEEecCHHHHH
Confidence            3467999999864    78889999999988765555678764 5789999999998      45789999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCC
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~  202 (311)
                      ..++.+++++| |+|++++|+|..+...++..|++++.++.+  +++.+|++.+++.+++ +++++++++|+||||.+++
T Consensus        90 ~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~  166 (351)
T PRK14807         90 HLIMLAFINKG-DVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIE  166 (351)
T ss_pred             HHHHHHhcCCC-CEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCC
Confidence            99999999999 999999999999999999999999999874  3467999999998865 8999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++.++   |++++.++|+||+|..+.  +....++  ++..+++|+++||||.|++||+|+||++++.        ++
T Consensus       167 ~~~l~~l---~~~~~~~~ivDe~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~--------~~  231 (351)
T PRK14807        167 REDIIKI---IEKSRGIVVVDEAYFEFY--GNTIVDV--INEFENLIVLRTLSKAFGLAGLRVGYAVANE--------NI  231 (351)
T ss_pred             HHHHHHH---HHhCCCEEEEeCcchhhc--ccchHHH--hhhCCCEEEEecchHhcccchhceeeeecCH--------HH
Confidence            6666555   456678899999998763  3222222  2334689999999999999999999999743        47


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.++.... .++++.++|.++.++|++
T Consensus       232 ~~~~~~~~~-~~~~~~~~q~~~~~~l~~  258 (351)
T PRK14807        232 LKYLNLVKS-PYNINSLSQVIALKVLRT  258 (351)
T ss_pred             HHHHHHccC-CCCcCHHHHHHHHHHHhH
Confidence            787776654 356789999999998864

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-34  Score=266.46  Aligned_cols=234  Identities=21%  Similarity=0.264  Sum_probs=194.5

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      +.++|+|+.|.+.    ++++|.+.+++....   ....|++ .+..+||++++++++      +++++|++|+|+++++
T Consensus        51 ~~~~i~l~~n~~p----~~~~~~v~~a~~~~~---~~~~Yp~-~~~~~lr~~ia~~~~------~~~~~I~~t~Ga~~~i  116 (380)
T PLN03026         51 PEDIVKLDANENP----YGPPPEVLEALGNMK---FPYVYPD-PESRRLRAALAEDSG------LESENILVGCGADELI  116 (380)
T ss_pred             ccceEEccCCCCC----CCCCHHHHHHHHhhH---hhccCCC-CCHHHHHHHHHHHhC------cChhhEEEcCCHHHHH
Confidence            5689999999753    567788888876531   2235765 478999999999983      5789999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc-CCCccEEEEeCCCCCCccCCC
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA-DENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~  202 (311)
                      ..++.+++++| |+|+++.|+|..|...++..|.+++.++..  .++.+|++.+++.+ .++++++++++|+||||.+++
T Consensus       117 ~~~~~~~~~~g-d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~  193 (380)
T PLN03026        117 DLLMRCVLDPG-DKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIIS  193 (380)
T ss_pred             HHHHHHhcCCC-CEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCC
Confidence            99999999999 999999999999999999999999999864  45789999999988 678999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|++.+    ++||+||+|..+.+.+. .  ...+...+++|+++||||.||++|+|+||++++.        ++
T Consensus       194 ~~~l~~l~~~~----~~vi~DeaY~~~~~~~~-~--~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~--------~~  258 (380)
T PLN03026        194 DDDLLKILELP----ILVVLDEAYIEFSTQES-R--MKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL--------SI  258 (380)
T ss_pred             HHHHHHHHhcC----CEEEEECcchhhcCCcc-h--HHHHHhCCCEEEEecchHhhcCccccceeeecCH--------HH
Confidence            88888887653    89999999998876432 1  1223345689999999999999999999999853        47


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.+..... .++++.++|.++.++|++
T Consensus       259 i~~l~~~~~-~~~~~~~~q~aa~~aL~~  285 (380)
T PLN03026        259 IEYLWRAKQ-PYNVSVAAEVAACAALSN  285 (380)
T ss_pred             HHHHHHhcC-CCCCCHHHHHHHHHHhhC
Confidence            888877765 357899999999998864

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.3e-34  Score=265.15  Aligned_cols=236  Identities=17%  Similarity=0.210  Sum_probs=197.7

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE  124 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~  124 (311)
                      +..++|+.|++.    +++++.+.+++.+...  ....|+++ +..+||+++++++      ++++++|++|+|+++++.
T Consensus        32 ~~~~~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~-~~~~Lr~~ia~~~------~~~~~~I~it~G~~~~l~   98 (369)
T PRK08153         32 PFRARIGANESG----FGPSPSVIAAMREAAA--EIWKYGDP-ENHDLRHALAAHH------GVAPENIMVGEGIDGLLG   98 (369)
T ss_pred             cceeEecCCCCC----CCCCHHHHHHHHHHHH--HhhcCCCC-ccHHHHHHHHHHh------CCCHHHEEEcCCHHHHHH
Confidence            445799999854    7888999999988764  23468875 5899999999998      467899999999999999


Q ss_pred             HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc-CCCccEEEEeCCCCCCccCCCH
Q 021547          125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA-DENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      .++.+++++| |.|+++.|+|+.+...++..|.+++.++.+.   ..+|++.+++.+ +.+++++++++|+||||.+++.
T Consensus        99 ~~~~~~~~~g-d~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~---~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~  174 (369)
T PRK08153         99 LIVRLYVEPG-DPVVTSLGAYPTFNYHVAGFGGRLVTVPYRD---DREDLDALLDAARRENAPLVYLANPDNPMGSWHPA  174 (369)
T ss_pred             HHHHHhcCCC-CEEEECCCcchHHHHHHHHcCCeEEEeeCCC---CCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCH
Confidence            9999999999 9999999999999988899999999998632   257888887755 4688999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV  283 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  283 (311)
                      +++++++++|++ +++||+||+|..+.+++. ..++..  ..+++|+++||||.|++||+|+||++++.        +++
T Consensus       175 ~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~-~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~~v~~~--------~~~  242 (369)
T PRK08153        175 ADIVAFIEALPE-TTLLVLDEAYCETAPAGA-APPIDT--DDPNVIRMRTFSKAYGLAGARVGYAIGAP--------GTI  242 (369)
T ss_pred             HHHHHHHHhCCC-CcEEEEeCchhhhcCccc-chhhhh--cCCCEEEEecchHhccCcchheeeeecCH--------HHH
Confidence            999999998874 999999999999877542 223322  24589999999999999999999999853        477


Q ss_pred             HHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          284 GSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       284 ~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +.+..... .+++|+++|+++.++|++
T Consensus       243 ~~l~~~~~-~~~~s~~~q~~~~~~l~~  268 (369)
T PRK08153        243 KAFDKVRN-HFGMNRIAQAAALAALKD  268 (369)
T ss_pred             HHHHHhhc-CCCCCHHHHHHHHHHhcC
Confidence            77777654 357899999999999864

>PRK08637 hypothetical protein; Provisional

Probab=100.00  E-value=2.9e-34  Score=264.57  Aligned_cols=241  Identities=17%  Similarity=0.246  Sum_probs=184.3

Q ss_pred             HHHHHHHHHHh---cCCCCCCCCCCCcHHHHHHHHHHHhhcCCC-CC-CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547           66 VAEDAIVDSVR---SSMFNCYAPMFGLPLARRAVAEYLNRDLPY-KL-SADDIYITLGCMEAVEIILTVITRLGAANILL  140 (311)
Q Consensus        66 ~~~~a~~~~~~---~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~-~~-~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~  140 (311)
                      .+.+++.+...   .....+|.++.|.++||+++++++.+..+. .. ..++|++|+|+++++.+++.+++++| |.|++
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~g-d~Vlv   98 (388)
T PRK08637         20 MYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQG-DTVLL   98 (388)
T ss_pred             chHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCC-CEEEE
Confidence            34444444443   234568999999999999999999875432 11 23689999999999999999999999 99999


Q ss_pred             cCCCCcchHHHH-HHcCcEEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547          141 PRPGWPFYESFA-KRNHIEVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARK  215 (311)
Q Consensus       141 ~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~  215 (311)
                      ++|+|+.|...+ ...|.+++.+++.. +++++|++.+++.++    +...++++++||||||.+++.+++++|+++|++
T Consensus        99 ~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~  177 (388)
T PRK08637         99 PDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKE  177 (388)
T ss_pred             cCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            999999998875 46899999998732 334689999988776    455567788999999999999999999999875


Q ss_pred             -----hCCEEEEeccccCCccCCCCCCcc-ccc-CCCCCe--EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHH
Q 021547          216 -----LGILVIADEVYGHLAFGSTPYIPM-GVF-GSIVPV--ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSI  286 (311)
Q Consensus       216 -----~~~~li~D~ay~~~~~~~~~~~~~-~~~-~~~~~~--i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~  286 (311)
                           |+++||+||+|.++.|++.+..++ ..+ +..+++  ++++|+||.|++||+|+||++++.++..  .+.+++.+
T Consensus       178 ~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~--~~~l~~~~  255 (388)
T PRK08637        178 LADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGS--SQTVKEAL  255 (388)
T ss_pred             HHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCC--cHHHHHHH
Confidence                 899999999999999877544332 222 233464  5567999999999999999997641000  12355555


Q ss_pred             hhh-----hccccCCCchhHHHHHhhhhc
Q 021547          287 KAC-----LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       287 ~~~-----~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ...     .....++|.++|.++..+|++
T Consensus       256 ~~~~~~~~~~~~~~~s~~~q~a~~~~l~~  284 (388)
T PRK08637        256 EKKVKGLIRSNISNGPHPSQSAVLRALNS  284 (388)
T ss_pred             HHHHHHHhhcccCCCCcHHHHHHHHHhCC
Confidence            431     122357899999999999875

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.4e-34  Score=263.82  Aligned_cols=237  Identities=22%  Similarity=0.352  Sum_probs=198.8

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      +.++|+|+.|.+.    +++++.+++++.+.+.......|++ .|..++|++++++++.    . ..++|++|+|+++++
T Consensus        25 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~~----~-~~~~I~~t~G~~~~i   94 (356)
T PRK04870         25 ATGMVKLDAMENP----YRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMGV----P-AGADVLLGNGSDELI   94 (356)
T ss_pred             CCCceeCcCCCCC----CCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhCc----C-CCCcEEEcCCHHHHH
Confidence            5689999999853    7889999999998886555567887 5889999999999942    1 235899999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCC
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~  202 (311)
                      ..++.+++++| |+|+++.|+|..|...++..|.+++.++++  +++.+|++.+++.+. .+++++++++|+||||.+++
T Consensus        95 ~~~~~~~~~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~  171 (356)
T PRK04870         95 QLLALACAKPG-ATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD  171 (356)
T ss_pred             HHHHHHhcCCC-CEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence            99999999999 999999999999999999999999999875  357899999999885 48999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+++|   ++++|+||+|..+.+.  ...+  .+...+++|+++|||| +++||+|+||++++.        ++
T Consensus       172 ~~~~~~i~~~~---~~~ii~De~y~~~~~~--~~~~--~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~--------~~  235 (356)
T PRK04870        172 DADVERIIEAA---PGLVVVDEAYQPFAGD--SWLP--RLARFPNLLVMRTVSK-LGLAGLRLGYLAGHP--------AW  235 (356)
T ss_pred             HHHHHHHHHHC---CCEEEEECCchhhcCc--chHH--HHhhCCCEEEEecchh-hhhHHHhhhhhhCCH--------HH
Confidence            99999999988   7899999999987543  2111  1233457999999999 799999999999753        47


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++++.... .++++.++|.++..++++
T Consensus       236 i~~~~~~~~-~~~~~~~~q~~a~~~l~~  262 (356)
T PRK04870        236 IAELDKVRP-PYNVNVLTQATALFALEH  262 (356)
T ss_pred             HHHHHHccC-CCcCCHHHHHHHHHHHhC
Confidence            777776653 456888999998888754

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=2.2e-34  Score=263.66  Aligned_cols=241  Identities=18%  Similarity=0.236  Sum_probs=201.3

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .+.++++|+.+.+.    +++++.+.+++.+....  ...|++.. ..++|+++++++      ++++++|++|+|++++
T Consensus        30 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~t~G~~~~   96 (367)
T PRK02731         30 GIADIIKLASNENP----LGPSPKAIEAIRAAADE--LHRYPDGS-GFELKAALAEKF------GVDPERIILGNGSDEI   96 (367)
T ss_pred             CCCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCc-HHHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence            46789999999754    45678899999887753  44787654 479999999998      3577899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+++++| |.|+++.|+|..|...++..|.+++.++.   +++.+|++.+++.++++++++++++|+||||.+++
T Consensus        97 l~~~~~~l~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~  172 (367)
T PRK02731         97 LELLARAYLGPG-DEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLP  172 (367)
T ss_pred             HHHHHHHhcCCC-CEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCC
Confidence            999999999999 99999999999998888999999999876   45788999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++.++++.|+ +|+++|+||+|..+.+++.....+..++..+++|+++|+||.||++|+|+||++++.        ++
T Consensus       173 ~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~--------~~  243 (367)
T PRK02731        173 AEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP--------EI  243 (367)
T ss_pred             HHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH--------HH
Confidence            999988888875 599999999999887755333333333345689999999999999999999999853        47


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.++.... .++.++++|.++.++|++
T Consensus       244 ~~~l~~~~~-~~~~~~~~~~~a~~~l~~  270 (367)
T PRK02731        244 IDALNRVRQ-PFNVNSLALAAAVAALDD  270 (367)
T ss_pred             HHHHHHccC-CCCCCHHHHHHHHHHhCC
Confidence            777776654 346788999999998864

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.4e-34  Score=258.52  Aligned_cols=233  Identities=24%  Similarity=0.350  Sum_probs=191.5

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      +.++|+|+.+.+.    +++++.+.+++.+.+.......|++ .|.+++|++++++++      +++++|++|+|+++++
T Consensus        17 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~g~~~lr~~ia~~~~------~~~~~I~~t~G~~~~l   85 (337)
T PRK03967         17 GNYRIWLDKNENP----FDLPEELKEEIFEELKRVPFNRYPH-ITSDPLREAIAEFYG------LDAENIAVGNGSDELI   85 (337)
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHhhcCccccCCC-CCHHHHHHHHHHHhC------cCcceEEEcCCHHHHH
Confidence            4578999999854    5778899999988876444557864 699999999999994      6789999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      ..++..+  +| |+|+++.|+|..|...++..|.+++.+++.  .++.+|++.+++.+ ++++++++++|+||||.+++.
T Consensus        86 ~~~~~~~--~g-d~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~  159 (337)
T PRK03967         86 SYLVKLF--EG-KHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPE  159 (337)
T ss_pred             HHHHHHh--CC-CeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCH
Confidence            9988877  78 999999999999999899999999999875  34789999998865 578899999999999999997


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV  283 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  283 (311)
                      +++.++   + ++++++|+||+|..+..  .+..++  ....+++|+++||||.|++||+|+||+++++        +++
T Consensus       160 ~~l~~i---~-~~~~~ii~De~y~~~~~--~~~~~~--~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~--------~~i  223 (337)
T PRK03967        160 EEILKV---L-ETGKPVVLDEAYAEFSG--KSLIGL--IDEYPNLILLRTFSKAFGLAGIRAGYAIANE--------EII  223 (337)
T ss_pred             HHHHHH---H-hcCCEEEEECchhhhcc--cchHHH--HhhCCCEEEEecchHhhcchhhhheeeecCH--------HHH
Confidence            666655   4 46999999999998652  222222  2234579999999999999999999999853        478


Q ss_pred             HHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          284 GSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       284 ~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +.++.... .+++|.++|.++..+|++
T Consensus       224 ~~~~~~~~-~~~~~~~~q~~~~~~l~~  249 (337)
T PRK03967        224 DALYRIKP-PFSLNILTMKIVRLALDH  249 (337)
T ss_pred             HHHHhhcC-CCCCCHHHHHHHHHHHhC
Confidence            88887765 357789999999998864

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.3e-34  Score=262.12  Aligned_cols=234  Identities=18%  Similarity=0.318  Sum_probs=192.7

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      ..++|+|+.|.+.    +++++.+.+++.+.+... ...|++. |..++|+++++++      ++++++|++|+|+++++
T Consensus        23 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~-~~~~lr~aia~~~------~~~~~~I~it~G~~~al   90 (353)
T PRK05387         23 LAKLIKLNTNENP----YPPSPKVLEAIRAALGDD-LRLYPDP-NADALRQAIAAYY------GLDPEQVFVGNGSDEVL   90 (353)
T ss_pred             ccceeeccCCCCC----CCCCHHHHHHHHHHhhhh-hhcCCCC-cHHHHHHHHHHHh------CCCHHHEEEcCCHHHHH
Confidence            4678999999864    666889999998876643 3478654 6799999999999      36889999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      ..++.+++++| |+|+++.|+|+.|...++..|++++.++++  +++.+|++.+++    .++++++++|+||||.+++.
T Consensus        91 ~~~~~~l~~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~  163 (353)
T PRK05387         91 AHAFLAFFNHD-RPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPL  163 (353)
T ss_pred             HHHHHHhcCCC-CEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCH
Confidence            99999999999 999999999999999999999999999874  357789998864    45788999999999999999


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV  283 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  283 (311)
                      +++++|+++++  ++++|+||+|..+  .+.+..++  ....+++|+++||||.|+++|+|+||++++.        +++
T Consensus       164 ~~~~~l~~~~~--~~~livDe~y~~~--~~~~~~~~--~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~~  229 (353)
T PRK05387        164 AEIERILAANP--DSVVVIDEAYVDF--GGESAIPL--IDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP--------ELI  229 (353)
T ss_pred             HHHHHHHHhCC--CcEEEEeCccccc--CCcchHHH--HhhCCCEEEEEehhHhhcchhhhceeeecCH--------HHH
Confidence            99999888654  9999999999874  33332222  2334579999999999999999999999743        477


Q ss_pred             HHHhhhhcc--ccCCCchhHHHHHhhhhc
Q 021547          284 GSIKACLGV--RSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       284 ~~~~~~~~~--~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++.....  .++++.++|.++.++|++
T Consensus       230 ~~l~~~~~~~~~~~~~~~~q~~~~~~l~~  258 (353)
T PRK05387        230 EALNRVKNSFNSYPLDRLAQAGAIAAIED  258 (353)
T ss_pred             HHHHHhhccCCCCCcCHHHHHHHHHHhcC
Confidence            777776532  356789999999888864

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.4e-33  Score=253.36  Aligned_cols=231  Identities=18%  Similarity=0.278  Sum_probs=186.3

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .+.++|+|+.|++.    +++++.+.+++.+.+..+....|+++ |.++||+++++++++.+   +++++|++|+|++++
T Consensus        17 ~~~~~i~l~~~~~~----~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i~it~Ga~~~   88 (335)
T PRK14808         17 EKRDRTYLALNENP----FPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNVSVGNGADEI   88 (335)
T ss_pred             CCCceeEecCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceEEEcCCHHHH
Confidence            46799999999864    78899999999887765444457654 89999999999997642   678999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +.+++.++     |.|+++.|+|+.|...++..|.+++.++++.  ++.++...    + ..++++++++||||||.+++
T Consensus        89 i~~~~~~~-----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s  156 (335)
T PRK14808         89 IYVMMLMF-----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVN----V-GEGDVVFIPNPNNPTGHVFE  156 (335)
T ss_pred             HHHHHHHh-----CcEEECCCCHHHHHHHHHHcCCeEEEecCCC--cCCCChhH----c-cCCCEEEEeCCCCCCCCCcC
Confidence            99999988     5799999999999999999999999998753  33344322    2 35689999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+    +++++||+||+|..+.  +....++  +...+++|+++||||.|+++|+|+||++++.        ++
T Consensus       157 ~~~l~~l~----~~~~~ii~DE~Y~~f~--~~~~~~~--~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~--------~~  220 (335)
T PRK14808        157 REEIERIL----KTGAFVALDEAYYEFH--GESYVDL--LKKYENLAVIRTFSKAFSLAAQRIGYVVSSE--------KF  220 (335)
T ss_pred             HHHHHHHH----hcCCEEEEECchhhhc--CCchHHH--HHhCCCEEEEEechhhccCcccceEEEEeCH--------HH
Confidence            88888876    4799999999999864  2222221  2233589999999999999999999999863        47


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.+..... .++++.++|.++..++++
T Consensus       221 ~~~l~~~~~-~~~~~~~~q~a~~~~l~~  247 (335)
T PRK14808        221 IDAYNRVRL-PFNVSYVSQMFAKVALDH  247 (335)
T ss_pred             HHHHHHhcC-CCCCCHHHHHHHHHHHhC
Confidence            788877653 357789999998888753

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=100.00  E-value=2.9e-33  Score=254.21  Aligned_cols=239  Identities=23%  Similarity=0.397  Sum_probs=198.7

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      ++.++|+|+.|++.    ++++|.+.+++.+...  ....|+++.+ .++|++++++++      +++++|++|+|++++
T Consensus        17 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~~~G~~~~   83 (346)
T TIGR01141        17 GGKEVIKLNSNENP----FGPPPKAKEALRAEAD--KLHRYPDPDP-AELKQALADYYG------VDPEQILLGNGSDEI   83 (346)
T ss_pred             CCCceEEccCCCCC----CCCCHHHHHHHHHhHH--HhhcCCCCCH-HHHHHHHHHHhC------cChHHEEEcCCHHHH
Confidence            45789999999864    6778999999998764  2347877665 899999999994      567899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+++++| |+|+++.|+|+.+...++..|.+++.+++..  ++.+|++.+++.+.++++++++++|+||||.+++
T Consensus        84 l~~~~~~l~~~g-d~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~  160 (346)
T TIGR01141        84 IELLIRAFLEPG-DAVLVPPPTYSMYEISAKIHGAEVVKVPLDE--DGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLS  160 (346)
T ss_pred             HHHHHHHhcCCC-CEEEEcCCCHHHHHHHHHHcCCeEEEeccCC--CCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCC
Confidence            999999999999 9999999999999889999999999998753  3678999999988889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++.++++.++ +|+++|+|++|+.+.+.+. ...+  ....+++|+++|+||.|+++|+|+||++++.        ++
T Consensus       161 ~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~-~~~~--~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~  228 (346)
T TIGR01141       161 RSDIEAVLERTP-EDALVVVDEAYGEFSGEPS-TLPL--LAEYPNLIVLRTLSKAFGLAGLRIGYAIANA--------EI  228 (346)
T ss_pred             HHHHHHHHHhCC-CCcEEEEECchhhhcCCcc-HHHH--HhhCCCEEEEehhhHhhhchhhhceeeecCH--------HH
Confidence            888888888877 7999999999997664321 1111  1223468999999999999999999999742        47


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++++.... .++.++++|.++.+++++
T Consensus       229 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~  255 (346)
T TIGR01141       229 IDALNKVRA-PFNLSRLAQAAAIAALRD  255 (346)
T ss_pred             HHHHHhccC-CCCCCHHHHHHHHHHhCC
Confidence            777776654 356789999999888764

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK08354 putative aminotransferase; Provisional

Probab=100.00  E-value=3.8e-32  Score=243.31  Aligned_cols=218  Identities=17%  Similarity=0.240  Sum_probs=175.9

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .+.++|+|+.+.+.    ++ |+.+.+++.+.+..  ...|+.   ...+|+++++++.         ++|++|+|++++
T Consensus         6 ~~~~~i~l~~~~np----~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~a   66 (311)
T PRK08354          6 REEGLIDFSASVNP----YP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEA   66 (311)
T ss_pred             CccceeEecCCCCC----CC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHH
Confidence            45779999999532    33 47888888877653  336753   4679999998883         379999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++..+ .+| |+|+++.|+|..|...++..|.+++.++        +|++.+++.++ +++.+++++|+||||.+++
T Consensus        67 l~~~~~~~-~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~  135 (311)
T PRK08354         67 LYLIGILA-LRD-RKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYN  135 (311)
T ss_pred             HHHHHHhh-CCC-CeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CCCEEEEecCCCCCCCccC
Confidence            99888655 489 9999999999999999999999997653        47888888776 5678999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+++|+++|+++|+||+|.++.+++...       ..+++|+++||||.|++||+|+||+++           +
T Consensus       136 ~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~-------~~~~vi~~~S~SK~~~l~GlRiG~~v~-----------~  197 (311)
T PRK08354        136 FKELKPLLDAVEDRNALLILDEAFIDFVKKPESP-------EGENIIKLRTFTKSYGLPGIRVGYVKG-----------F  197 (311)
T ss_pred             HHHHHHHHHHhhhcCcEEEEeCcchhcccccccc-------CCCcEEEEeccHhhcCCccceeeeeee-----------h
Confidence            9999999999999999999999999988764211       145899999999999999999999997           2


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .+.++.... .+..+.++|.++..+++
T Consensus       198 ~~~l~~~~~-~~~~~~~~~~~~~~~~~  223 (311)
T PRK08354        198 EEAFRSVRM-PWSIGSTGYAFLEFLIE  223 (311)
T ss_pred             HHHHHHcCC-CccCCHHHHHHHHHHHH
Confidence            344554443 33456677777777665

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=2e-32  Score=250.07  Aligned_cols=235  Identities=22%  Similarity=0.344  Sum_probs=190.7

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE-eCChHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI-TLGCMEA  122 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~-t~g~~~a  122 (311)
                      +.++|+|+.+++.    ++++|.+.+++.+....  ...|+++. ..++|+++++++      ++++++|++ |+|++++
T Consensus        33 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~~~~Ga~~~   99 (361)
T PRK00950         33 PESIIKLGSNENP----LGPSPKAVEAIEKELSK--IHRYPEPD-APELREALSKYT------GVPVENIIVGGDGMDEV   99 (361)
T ss_pred             ccceEEccCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCC-HHHHHHHHHHHh------CCCHHHEEEeCCCHHHH
Confidence            4589999999753    56788888888877653  34677654 499999999998      457889999 7899999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+++++| |+|+++.|+|..+...++..|++++.++.  ..++.+|++.+++.++++++++++++|+||||.+++
T Consensus       100 i~~~~~~~~~~g-d~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~  176 (361)
T PRK00950        100 IDTLMRTFIDPG-DEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIP  176 (361)
T ss_pred             HHHHHHHhcCCC-CEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcC
Confidence            999999999999 99999999999998889999999998874  345789999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+   ++.++|+++|+++|+|++|..+.  +.+...+  ....+++++++||||.||+||+|+||++++.        ++
T Consensus       177 ~~---~l~~l~~~~~~~li~De~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~--------~~  241 (361)
T PRK00950        177 EE---DIRKILESTDALVFVDEAYVEFA--EYDYTPL--ALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE--------WL  241 (361)
T ss_pred             HH---HHHHHHHHCCcEEEEECchhhhC--ccchHHH--HHhcCCEEEEEeehHhhcCchhhcchhcCCH--------HH
Confidence            55   55556678899999999999865  2222222  1233578999999999999999999999753        47


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.++.... ..+.++++|+++..++++
T Consensus       242 ~~~~~~~~~-~~~~~~~~~~~a~~~l~~  268 (361)
T PRK00950        242 IDYYMRAKT-PFSLTRLSQAAAIAALSD  268 (361)
T ss_pred             HHHHHHhcC-CCCCCHHHHHHHHHHhcC
Confidence            777777654 345788999988888764

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=100.00  E-value=4.1e-32  Score=244.97  Aligned_cols=218  Identities=19%  Similarity=0.204  Sum_probs=171.7

Q ss_pred             CCCeeecCCC-CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           44 PRPVIPLGHG-DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        44 ~~~~i~~~~g-~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      ..++|+|+.+ +|.    .+.++.+.+   ..+     ..|+.  +..+||+++++++.        .++|++|+|++++
T Consensus        19 ~~~~i~l~~ne~p~----~~~~~~~~~---~~~-----~~yp~--~~~~Lr~~ia~~~~--------~~~I~it~Gs~~a   76 (330)
T PRK05664         19 LADWLDLSTGIAPW----PWPVPAIPA---DAW-----ARLPE--TDDGLEAAARAYYG--------APQLLPVAGSQAA   76 (330)
T ss_pred             HHHheeecCCcCCC----CCCCcccCH---HHH-----HhCCC--ChHHHHHHHHHHhC--------CCCEEECcCHHHH
Confidence            3468999999 432    112122221   122     14754  33899999999993        4799999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +.+++.  +.+| |+|++++|+|+.|...++..|.+++.++.          +++++.++ +++++++++||||||.+++
T Consensus        77 l~~~~~--~~~g-d~v~v~~P~y~~~~~~~~~~g~~~~~v~~----------~~~~~~~~-~~~~v~l~nP~NPTG~~~s  142 (330)
T PRK05664         77 IQALPR--LRAP-GRVGVLSPCYAEHAHAWRRAGHQVRELDE----------AEVEAALD-SLDVLVVVNPNNPTGRRFD  142 (330)
T ss_pred             HHHHHH--ccCC-CEEEEcCCChHHHHHHHHHcCCeEEEech----------hhHhhhhc-CCCEEEEeCCcCCCCCccC
Confidence            998753  5799 99999999999999999999999998865          23444443 6788999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+++|+++|++||+||+|..+.    +..++..+...+++|+++||||.|++||+|+||++++.        ++
T Consensus       143 ~~~l~~l~~~~~~~~~~iI~DE~y~~~~----~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~--------~l  210 (330)
T PRK05664        143 PARLLAWHARLAARGGWLVVDEAFMDNT----PQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEP--------AL  210 (330)
T ss_pred             HHHHHHHHHHHHhcCCEEEEECCcccCC----CcccccccccCCCEEEEeeccccccCCCcceEEEEeCH--------HH
Confidence            9999999999999999999999998653    21234445555689999999999999999999999853        47


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.+..... .++.+.++|.++.++|++
T Consensus       211 ~~~~~~~~~-~~~~~~~~~~~~~~~L~~  237 (330)
T PRK05664        211 LRALAELLG-PWTVSGPTRWLAQAALAD  237 (330)
T ss_pred             HHHHHHhcC-CCCCCHHHHHHHHHHHhC
Confidence            888877654 346788999999998865

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=9.9e-33  Score=251.03  Aligned_cols=231  Identities=20%  Similarity=0.322  Sum_probs=185.5

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE  124 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~  124 (311)
                      ...++|+.+.+.    +++++.+        .......|+.. ...++++++++++      ++++++|++|+|+++++.
T Consensus        28 ~~~~~l~~Nenp----~~~~~~~--------~~~~~~~Yp~~-~~~~l~~~~a~~~------g~~~~~I~~~~Gs~e~i~   88 (351)
T PRK01688         28 NGDVWLNANEYP----TAVEFQL--------TQQTLNRYPEC-QPKAVIENYAAYA------GVKPEQVLVSRGADEGIE   88 (351)
T ss_pred             CCceEecCCCCC----CCCChhh--------cccccccCCCC-ChHHHHHHHHHHh------CCCHHHEEEcCCHHHHHH
Confidence            356999998743    4445432        11234467664 4578999999887      468899999999999999


Q ss_pred             HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547          125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ  204 (311)
Q Consensus       125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~  204 (311)
                      .++.+++++|.|.|+++.|+|..|...++..|++++.+++.  .++.+|++.+++.+ ++++++++++||||||..++.+
T Consensus        89 ~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~  165 (351)
T PRK01688         89 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTL--DNWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQ  165 (351)
T ss_pred             HHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHH
Confidence            99999988854899999999999999999999999999874  35789999999887 5899999999999999999999


Q ss_pred             HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHH
Q 021547          205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVG  284 (311)
Q Consensus       205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  284 (311)
                      ++++|++.|++ +.+||+||+|..+.... ..  ...+...+++|+++||||.||++|+|+||++++.        ++++
T Consensus       166 ~l~~l~~~~~~-~~~vivDEay~~f~~~~-s~--~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~--------~~i~  233 (351)
T PRK01688        166 DLRTLLELTRG-KAIVVADEAYIEFCPQA-SL--AGWLAEYPHLVILRTLSKAFALAGLRCGFTLANE--------EVIN  233 (351)
T ss_pred             HHHHHHHhCCC-CcEEEEECchhhcCCCC-Ch--HHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCH--------HHHH
Confidence            99999999986 68999999999876321 11  1222345689999999999999999999999743        4778


Q ss_pred             HHhhhhccccCCCchhHHHHHhhhhc
Q 021547          285 SIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       285 ~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      .++.... .++++.++|.++.++|++
T Consensus       234 ~l~~~~~-~~~v~~~~~~~a~~~L~~  258 (351)
T PRK01688        234 LLLKVIA-PYPLSTPVADIAAQALSP  258 (351)
T ss_pred             HHHhccC-CCCCCHHHHHHHHHHHhc
Confidence            7777654 356788888888888764

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.2e-32  Score=248.80  Aligned_cols=211  Identities=19%  Similarity=0.332  Sum_probs=175.6

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEE
Q 021547           80 FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEV  159 (311)
Q Consensus        80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~  159 (311)
                      ...|+++ +..+||+++++++      ++++++|++|+|+++++.+++.+++.+|.|.|+++.|+|..|...++..|.++
T Consensus        53 ~~~Y~~~-~~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~  125 (364)
T PRK04781         53 TRRYPDP-QPPGLRSALAALY------GCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPL  125 (364)
T ss_pred             hccCCCC-CHHHHHHHHHHHh------CcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEE
Confidence            3468765 4799999999998      35789999999999999999999988874589999999999999899999999


Q ss_pred             EEeeccC-CCCcccCHHHHHh-hcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCC
Q 021547          160 RHFDLLP-ERGWEVDLEAVEA-LADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI  237 (311)
Q Consensus       160 ~~~~~~~-~~~~~~d~~~l~~-~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~  237 (311)
                      +.+++.. .+++.+|++.+.+ ..+++++++++++|+||||.+++.+++++++++|+ ++++||+||+|..+.+.. .  
T Consensus       126 ~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~-~--  201 (364)
T PRK04781        126 VEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDVP-S--  201 (364)
T ss_pred             EEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCCc-c--
Confidence            9999743 3456788888765 44678999999999999999999999999999886 489999999999987532 1  


Q ss_pred             cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          238 PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       238 ~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      .+...+..+++|+++||||.|++||+|+||++++.        ++++.+..... .++.+.++|.++..+|++
T Consensus       202 ~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~--------~l~~~l~~~~~-~~~~~~~~~~~a~~~l~~  265 (364)
T PRK04781        202 AVGLLARYDNLAVLRTLSKAHALAAARIGSLIANA--------ELIAVLRRCQA-PYPVPTPCAALAEQALSA  265 (364)
T ss_pred             hHHHHhhCCCEEEEecChhhcccccceeeeeeCCH--------HHHHHHHhccC-CCCCCHHHHHHHHHHHhc
Confidence            12223345689999999999999999999999753        47888887765 457789999999888865

>PRK07908 hypothetical protein; Provisional

Probab=100.00  E-value=4.5e-31  Score=240.16  Aligned_cols=229  Identities=17%  Similarity=0.221  Sum_probs=183.1

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .++++++|+.+.+.    +++++.+++++.+.+..  ...|++..|..++|+++++++      ++++++|++|+|++++
T Consensus        20 ~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~a   87 (349)
T PRK07908         20 AGPGLLDFAVNVRH----DTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEG   87 (349)
T ss_pred             CCCCeEEecCCCCC----CCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHH
Confidence            36889999999854    66788899999887653  347988889999999999998      3578999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +.+++. + .+|  .+++..|+|..+...++..|.+++.++++.  ++.+|.+.+    +++++++++++|+||||.+++
T Consensus        88 l~~~~~-l-~~~--~viv~~P~y~~~~~~~~~~G~~i~~v~~~~--~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~  157 (349)
T PRK07908         88 FALLAR-L-RPR--RAAVVHPSFTEPEAALRAAGIPVHRVVLDP--PFRLDPAAV----PDDADLVVIGNPTNPTSVLHP  157 (349)
T ss_pred             HHHHHh-c-CCC--eEEEeCCCChHHHHHHHHcCCEEEeeccCc--ccCcChhHh----ccCCCEEEEcCCCCCCCCCcC
Confidence            999888 4 555  567789999999999999999999998753  367888754    457889999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++   .++|+ ++.++|+||+|..+.+ +. ..++... ..+++|+++||||.|+++|+|+||++++.        ++
T Consensus       158 ~~~l---~~l~~-~~~~iIvDe~y~~~~~-~~-~~~l~~~-~~~~~i~i~S~SK~~~l~GlRiG~~~~~~--------~~  222 (349)
T PRK07908        158 AEQL---LALRR-PGRILVVDEAFADAVP-GE-PESLAGD-DLPGVLVLRSLTKTWSLAGLRVGYALGAP--------DV  222 (349)
T ss_pred             HHHH---HHHHh-cCCEEEEECcchhhcc-CC-ccccccc-cCCCEEEEeecccccCCccceeeeeecCH--------HH
Confidence            6654   55565 4889999999998754 32 3344333 23479999999999999999999999753        47


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++.+..... .+..+++.|.++..+++
T Consensus       223 ~~~~~~~~~-~~~~~~~~~~a~~~~~~  248 (349)
T PRK07908        223 LARLTRGRA-HWPVGTLQLEAIAACCA  248 (349)
T ss_pred             HHHHHhcCC-CCCccHHHHHHHHHHhc
Confidence            787776644 35677888888887765

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-32  Score=235.32  Aligned_cols=223  Identities=25%  Similarity=0.398  Sum_probs=194.4

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhcCC--CCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH-HcC
Q 021547           80 FNCYAPMFGLPLARRAVAEYLNRDLP--YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK-RNH  156 (311)
Q Consensus        80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~-~~g  156 (311)
                      ...|.+-.|++++|+++|+++.+..|  ...+++++++++|+|+++++++.+|++|| |.-|+|.|.|+++..-++ +.|
T Consensus       114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpg-dafLvPtPyY~gfdrdl~~rTg  192 (471)
T KOG0256|consen  114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPG-DAFLVPTPYYPGFDRDLRWRTG  192 (471)
T ss_pred             HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCC-ceeeecCCCCCcccccceeccC
Confidence            33688888999999999999987554  46689999999999999999999999999 999999999999865443 578


Q ss_pred             cEEEEeeccCCCCcccCHHHHHhhcC------CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547          157 IEVRHFDLLPERGWEVDLEAVEALAD------ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA  230 (311)
Q Consensus       157 ~~~~~~~~~~~~~~~~d~~~l~~~l~------~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~  230 (311)
                      .+++++.....+++.++.+.||++++      .+.++++++||+||.|.+++++++..|++++.++|+.+|+||+|+.-+
T Consensus       193 veivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sV  272 (471)
T KOG0256|consen  193 VEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSV  272 (471)
T ss_pred             ceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccc
Confidence            89999999888999999999998764      378999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCcccccC-----CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHH
Q 021547          231 FGSTPYIPMGVFG-----SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEM  305 (311)
Q Consensus       231 ~~~~~~~~~~~~~-----~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~  305 (311)
                      |+...+.++..+.     ..+++-++.|+||-||+||+|+|.|...+.       ++++..+.+..+ ..+|+..|+.++
T Consensus       273 F~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne-------~VvsaA~kmssf-~~vSs~tQ~~la  344 (471)
T KOG0256|consen  273 FDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNE-------DVVSAATKMSSF-GLVSSQTQYLLA  344 (471)
T ss_pred             cCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecCh-------HHHHHHHHHhhc-cCCcHHHHHHHH
Confidence            9877777754442     344689999999999999999999987664       477777777664 468999999999


Q ss_pred             hhhhcC
Q 021547          306 FLLVNK  311 (311)
Q Consensus       306 ~~l~~~  311 (311)
                      .+|+|+
T Consensus       345 ~LLSD~  350 (471)
T KOG0256|consen  345 SLLSDE  350 (471)
T ss_pred             HHhchH
Confidence            999873

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=2.5e-31  Score=240.52  Aligned_cols=220  Identities=15%  Similarity=0.175  Sum_probs=170.6

Q ss_pred             CCCeeecCCCCCCCCCCCCCc-HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTA-AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~-~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      ...+++|+.+...    ++++ +.+. .  ..+     ..|+.+ . .+||++++++++-     ..+++|++|+|++++
T Consensus        23 ~~~~i~ls~Nenp----~~~~~~~~~-~--~~~-----~~Yp~~-~-~~L~~~ia~~~~~-----~~~~~I~i~~Gs~e~   83 (339)
T PRK06959         23 YDAWLDLSTGINP----HGYPVPPVP-A--DAW-----RRLPED-D-DGLAACAARYYGA-----PDAAHVLPVAGSQAA   83 (339)
T ss_pred             hhhhceeccCCCC----CCCCCCCCC-H--HHH-----HhCCCc-h-HHHHHHHHHHhCC-----CCcccEEECcCHHHH
Confidence            3568999999632    2222 1111 1  122     258764 3 8999999999942     135899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +.++.. ++++| + |+++.|+|+.|...++..|.+++.++.+.        +.    +.+..+.+++++||||||.+++
T Consensus        84 i~~l~~-~~~~g-~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~----~~~~~~~v~l~nPnNPTG~~~s  148 (339)
T PRK06959         84 IRALPA-LLPRG-R-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DT----LPAALTHLIVVNPNNPTAERLP  148 (339)
T ss_pred             HHHHHH-hcCCC-e-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hh----ccccCCEEEEeCCCCCCCCCCC
Confidence            997765 46777 6 88999999999999999999999886531        22    2234578999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|++.|.+++.++|+||+|.++.+.    .++..+...+++|+++||||.|++||+|+||++++.        ++
T Consensus       149 ~~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~--------~l  216 (339)
T PRK06959        149 AARLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAP--------AL  216 (339)
T ss_pred             HHHHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhccCCCCEEEEecChhhcCCcchheEEEecCH--------HH
Confidence            999999999999999999999999987642    223333334679999999999999999999999853        48


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.++.... .+++|.++|.++.++|++
T Consensus       217 i~~l~~~~~-~~~vs~~~q~a~~~~L~~  243 (339)
T PRK06959        217 LAALRDALG-AWTVSGPARHAVRAAFAD  243 (339)
T ss_pred             HHHHHHhcC-CCCCcHHHHHHHHHHhCc
Confidence            888888765 456799999999999875

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=6.2e-32  Score=246.18  Aligned_cols=230  Identities=19%  Similarity=0.316  Sum_probs=182.7

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      +...++|+.+.+.    +++++.+     . ..  ....|++. +..+||+++++++      ++++++|++|+|+++++
T Consensus        30 ~~~~~~l~~ne~~----~~~~~~~-----~-~~--~~~~Yp~~-~~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i   90 (354)
T PRK04635         30 GRGDIWINANESP----FNNEYKL-----D-LA--RLNRYPEC-QPPELINAYSAYA------GVAPEQILTSRGADEAI   90 (354)
T ss_pred             CCCcEEeeCCCCC----CCCChhh-----h-hH--HhccCCCC-CHHHHHHHHHHHh------CcCHHHEEEeCCHHHHH
Confidence            3567999999754    4444432     1 11  23468775 5899999999987      46889999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      ..++.+++++|.|+|+++.|+|..|...++..|.+++.+++.  .++.+|.+.++. + ++++++++++|+||||.+++.
T Consensus        91 ~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~  166 (354)
T PRK04635         91 ELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLT--ADYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDR  166 (354)
T ss_pred             HHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecC--CCCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCH
Confidence            999999998775789999999999999999999999999874  346788888874 3 689999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV  283 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  283 (311)
                      +++++|++.|+  +++||+||+|..+... .....+  ....+++|+++||||.|+++|+|+||++++.        +++
T Consensus       167 ~~l~~l~~~~~--~~~vivDeay~~~~~~-~s~~~~--~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~--------~~~  233 (354)
T PRK04635        167 ADIEQLIEMTP--DAIVVVDEAYIEFCPE-YSVADL--LASYPNLVVLRTLSKAFALAGARCGFTLANE--------ELI  233 (354)
T ss_pred             HHHHHHHHhCC--CcEEEEeCchHhhccC-cchHHH--HhhCCCEEEEechHHHhhhhHHHHhhhhCCH--------HHH
Confidence            99999998876  4999999999987532 111112  2234689999999999999999999998753        477


Q ss_pred             HHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          284 GSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       284 ~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +.+..... .++.+.+.|.++.++|++
T Consensus       234 ~~l~~~~~-~~~~~~~~~~~a~~~l~~  259 (354)
T PRK04635        234 EILMRVIA-PYPVPLPVSEIATQALSE  259 (354)
T ss_pred             HHHHhhcC-CCCCCHHHHHHHHHHHhc
Confidence            77776544 356777888888887754

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=99.98  E-value=5.2e-31  Score=238.02  Aligned_cols=214  Identities=20%  Similarity=0.229  Sum_probs=166.3

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEI  125 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~  125 (311)
                      .+|+|+.+...    ++.             ......|+. ....+||+++++++      ++.+++|++|+|+++++..
T Consensus        17 ~~i~l~~Nenp----~~~-------------~~~~~~Yp~-~~~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~   72 (332)
T PRK06425         17 RIIDFSANIND----FMD-------------IGDISIYPE-ISYTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYR   72 (332)
T ss_pred             CEEEeccccCC----CcC-------------hhhcccCcC-cCHHHHHHHHHHHh------CCCcceEEECCCHHHHHHH
Confidence            68999999632    110             012346865 35799999999999      4578899999999999999


Q ss_pred             HHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHH
Q 021547          126 ILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQH  205 (311)
Q Consensus       126 ~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~  205 (311)
                      ++.. +++| + |+++.|+|..|...++..|.+++.++++.   +..+.+.+++   .+++++++++||||||.+++.++
T Consensus        73 ~~~~-~~~~-~-vv~~~P~y~~y~~~~~~~G~~v~~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~  143 (332)
T PRK06425         73 LLSY-INVG-N-IIIVEPNFNEYKGYAFTHGIRISALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDS  143 (332)
T ss_pred             HHHH-hCCC-c-EEEeCCChHHHHHHHHHcCCeEEEEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHH
Confidence            9974 5667 5 66779999999999999999999998753   3456555543   47899999999999999999999


Q ss_pred             HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHH
Q 021547          206 LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGS  285 (311)
Q Consensus       206 l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  285 (311)
                      +++|+++|+++|++||+||+|.++.+++.+ .........+++|+++||||.|++||+|+||++++.        ++++.
T Consensus       144 ~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~-~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~--------~li~~  214 (332)
T PRK06425        144 LLTISEICRKKGALLFIDEAFIDFVPNRAE-EDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD--------YNMKI  214 (332)
T ss_pred             HHHHHHHHHHcCCEEEEecchhccccccch-hHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH--------HHHHH
Confidence            999999999999999999999998875421 112222334689999999999999999999999853        47777


Q ss_pred             HhhhhccccCCCchhHH
Q 021547          286 IKACLGVRSGPSTLIQV  302 (311)
Q Consensus       286 ~~~~~~~~~~~~~~~q~  302 (311)
                      ++.... .+..+.+++.
T Consensus       215 l~~~~~-~~~~~~~~~~  230 (332)
T PRK06425        215 SRKITE-PWSVCDPAID  230 (332)
T ss_pred             HHHcCC-CCccCHHHHH
Confidence            776544 2334444433

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=99.97  E-value=1.6e-30  Score=234.73  Aligned_cols=224  Identities=20%  Similarity=0.291  Sum_probs=180.5

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      ..+++++|+.|.+..    +++  ..+...     ....+|+++.+ +++|++++++++      +++++|++|+|++++
T Consensus        15 ~~~~~~~~~~~~~~~----~~~--~~~~~~-----~~~~~y~~~~~-~~lr~~la~~~~------~~~~~i~~t~G~~~~   76 (330)
T TIGR01140        15 PPEDWLDFSTGINPL----GPP--VPPIPA-----SAWARYPDPEY-DELRAAAAAYYG------LPAASVLPVNGAQEA   76 (330)
T ss_pred             ChhheeEccccCCCC----CCC--hhhcch-----HHHhhCCCccH-HHHHHHHHHHhC------CChhhEEECCCHHHH
Confidence            367899999997542    222  122111     12347887665 999999999983      568899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +.+++.++ .+|  .|++++|+|..|...++..|++++.++         |++.+++.+ ++++++++++|+||||.+++
T Consensus        77 i~~~~~~l-~~g--~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~  143 (330)
T TIGR01140        77 IYLLPRLL-APG--RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAAL-EELDVLVLCNPNNPTGRLIP  143 (330)
T ss_pred             HHHHHHHh-CCC--eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhc-ccCCEEEEeCCCCCCCCCCC
Confidence            99987764 566  599999999999999999999998875         778888887 46789999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc-CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      .+++++|+++|+++|++||+|++|..+.+..    ++..+ +..+++|+++|+||.||++|+|+||++++.        +
T Consensus       144 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~--------~  211 (330)
T TIGR01140       144 PETLLALAARLRARGGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP--------A  211 (330)
T ss_pred             HHHHHHHHHHhHhcCCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCCH--------H
Confidence            9999999999999999999999999876531    22222 234679999999999999999999999853        4


Q ss_pred             HHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          282 IVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++.+..... ..++|+++|.++.++|++
T Consensus       212 ~~~~l~~~~~-~~~~s~~~q~~~~~~l~~  239 (330)
T TIGR01140       212 LLARLREALG-PWTVNGPARAAGRAALAD  239 (330)
T ss_pred             HHHHHHhcCC-CCCchHHHHHHHHHHHhc
Confidence            7777777654 456789999999999875

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=99.97  E-value=2.9e-30  Score=217.12  Aligned_cols=270  Identities=26%  Similarity=0.375  Sum_probs=205.9

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCcHHHHHHHHH
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS----MFNCYAPMFGLPLARRAVAE   98 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~   98 (311)
                      ..-++|+++++++.+.+   +.++.|+++.|+|...|.  ......+...+.+.++    ...+|..++|...|.++++.
T Consensus        11 t~~sGi~~lMdDl~d~L---rt~g~imLggGNPa~iPe--m~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~   85 (417)
T COG3977          11 TRHSGITQLMDDLNDGL---RTPGAIMLGGGNPARIPE--MDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAK   85 (417)
T ss_pred             hhhhhHHHHHHHHHhhc---cCCCceeeCCCCcccChh--HHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHH
Confidence            66789999999999998   567799999999875432  1233344445555543    24489999999999999999


Q ss_pred             HHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc---CC-CCEEEec-CCCCcchHHHHHHcCcEEEE---eeccCCCC-
Q 021547           99 YLNRDLPYKLSADDIYITLGCMEAVEIILTVITR---LG-AANILLP-RPGWPFYESFAKRNHIEVRH---FDLLPERG-  169 (311)
Q Consensus        99 ~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~---~g-~d~Vl~~-~p~~~~~~~~~~~~g~~~~~---~~~~~~~~-  169 (311)
                      ++++++||+++++||.+|+|++.+++.++..+..   .| ..+|++| .|.|.+|..+.-.-.+-+..   +++.+... 
T Consensus        86 ~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~F  165 (417)
T COG3977          86 MLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQF  165 (417)
T ss_pred             HHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccce
Confidence            9999999999999999999999999999999954   22 1467776 79999986543322222111   11122222 


Q ss_pred             -cccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547          170 -WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV  248 (311)
Q Consensus       170 -~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~  248 (311)
                       +.+|.+.|+  +.+++.+++++.|.||||.+++++++.+|.+++++||+.+++|++|+. .|.+-.+..+. +.-.+|+
T Consensus       166 KY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~-PFP~iifsd~~-~~w~~Ni  241 (417)
T COG3977         166 KYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV-PFPGIIFSDAT-PLWNENI  241 (417)
T ss_pred             eeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC-CCCceeccccc-ccCCCCE
Confidence             445655554  357899999999999999999999999999999999999999999995 12222222211 2236689


Q ss_pred             EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          249 ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       249 i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      |.|.|+||. |+||.|+|.+++..        ++++.+..+.+ .+..++.+.|++++++|++
T Consensus       242 ilC~SLSK~-GLPG~R~GIiIane--------~viqaitnmn~iisLap~~~G~Aia~~mie~  295 (417)
T COG3977         242 ILCMSLSKL-GLPGSRCGIIIANE--------KVIQAITNMNGIISLAPGRMGPAIAAEMIES  295 (417)
T ss_pred             EEEeehhhc-CCCCcceeEEEccH--------HHHHHHHhccceeeecCCCccHHHHHHHhhc
Confidence            999999998 99999999999853        58888888865 5778999999999999875

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.97  E-value=1.1e-28  Score=223.56  Aligned_cols=251  Identities=33%  Similarity=0.513  Sum_probs=201.6

Q ss_pred             eecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHH
Q 021547           48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIIL  127 (311)
Q Consensus        48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~  127 (311)
                      |||+.|++.    +..++.+...+...........|.+..|..++++.+++++...++.....+++++++|+++++..++
T Consensus         1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~   76 (350)
T cd00609           1 IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL   76 (350)
T ss_pred             CCCCCCCCC----CCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence            578888854    3445555555544222334457888899999999999999988777667889999999999999999


Q ss_pred             HHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHH
Q 021547          128 TVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQ  207 (311)
Q Consensus       128 ~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~  207 (311)
                      .++.++| |+|+++.++|.++...++..|.+++.++.........+.+.++....++++++++++++||||..++.++++
T Consensus        77 ~~~~~~g-~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~  155 (350)
T cd00609          77 RALLNPG-DEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELE  155 (350)
T ss_pred             HHhCCCC-CEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHH
Confidence            9999999 999999999999999999999999999875443332223666767778999999999999999999999999


Q ss_pred             HHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHh
Q 021547          208 KIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIK  287 (311)
Q Consensus       208 ~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~  287 (311)
                      +|+++|+++|+++|+|++|+.+.+.+.....+...+..+.+++++|++|.++.+|.|+||++++++       ++.+.++
T Consensus       156 ~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-------~~~~~~~  228 (350)
T cd00609         156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-------ELLERLK  228 (350)
T ss_pred             HHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH-------HHHHHHH
Confidence            999999999999999999998877654332222334455689999999999889999999998642       3677777


Q ss_pred             hhhc-cccCCCchhHHHHHhhhhc
Q 021547          288 ACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       288 ~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      .... ...+++..+|.++..+|+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~l~~  252 (350)
T cd00609         229 KLLPYTTSGPSTLSQAAAAAALDD  252 (350)
T ss_pred             HHHHhcccCCChHHHHHHHHHHhC
Confidence            7644 3468889999998888764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=99.97  E-value=2.5e-29  Score=221.25  Aligned_cols=284  Identities=21%  Similarity=0.267  Sum_probs=211.5

Q ss_pred             ccccccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHH---------------
Q 021547            5 AEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAED---------------   69 (311)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~---------------   69 (311)
                      .+++.++.++.+.+.   ...+.++.+.....+     .+.++|+|+.|-|... .++......+               
T Consensus         4 ~~~dys~~ls~es~s---rk~~p~~~~~~~~s~-----~~i~~i~lagGlPnp~-~fp~~~~s~~p~~~~~~e~~~~~~~   74 (472)
T KOG0634|consen    4 PPKDYSHHLSKESAS---RKLSPLRALGDIKSA-----SPISIISLAGGLPNPD-YFPIRSDSIKPQGSWKKENGKKLNN   74 (472)
T ss_pred             CcccHHHHhcccccc---cccChHHHhhhHhhc-----CCCceEEecCCCCCCC-cccccccccccccCccccccccccc
Confidence            456677777755555   666677766653322     3455899999955411 1333222222               


Q ss_pred             ---HHHHHHhc-----CCCCCCCCCCCcHHHHHHHHHHHh-hcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547           70 ---AIVDSVRS-----SMFNCYAPMFGLPLARRAVAEYLN-RDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL  140 (311)
Q Consensus        70 ---a~~~~~~~-----~~~~~Y~~~~g~~~lr~~ia~~l~-~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~  140 (311)
                         ++.....+     ....+|++..|.++|+..+.+... ..+......-+|++|+|.+.+++.+++.+++.| |.|++
T Consensus        75 ~~~~~~~~~~~~~l~~s~alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~g-d~vli  153 (472)
T KOG0634|consen   75 VTFAFENEASENTLPLSRALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRG-DHVLI  153 (472)
T ss_pred             eeeeccccCCcccchhhhhhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCC-CceEE
Confidence               00000011     124589999999999999999655 222333344589999999999999999999999 99999


Q ss_pred             cCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---C-----ccEEEEeCC--CCCCccCCCHHHHHHHH
Q 021547          141 PRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---N-----TAAIVIINP--CNPCGNVLTYQHLQKIA  210 (311)
Q Consensus       141 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~-----~~~i~i~~p--~nptG~~~~~~~l~~l~  210 (311)
                      ..++|++-....+..|++++.|++   +..++++|.|++.+..   .     ...|+.+-|  +||||..++.+..++|.
T Consensus       154 e~~ty~~AL~s~~a~gv~~ipv~m---d~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy  230 (472)
T KOG0634|consen  154 EEYTYPSALQSMEALGVKIIPVKM---DQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIY  230 (472)
T ss_pred             ecccchHHHHhccccCceEEeccc---cCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHH
Confidence            999999999999999988888876   3457899999997653   1     134566655  79999999999999999


Q ss_pred             HHHHHhCCEEEEeccccCCccCC--------CC-----------CCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          211 ETARKLGILVIADEVYGHLAFGS--------TP-----------YIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       211 ~l~~~~~~~li~D~ay~~~~~~~--------~~-----------~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      ++|++|+++||+||.|..+.|+.        .+           ..++..+|.++|||...||||. .+||+|+||+.++
T Consensus       231 ~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKi-iaPGlRlG~it~~  309 (472)
T KOG0634|consen  231 QLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKI-IAPGLRLGWITGN  309 (472)
T ss_pred             HHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhh-hcCcceeEEeecC
Confidence            99999999999999999988862        11           2234556778999999999999 5899999999986


Q ss_pred             CCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          272 DPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ..        +++++-+..+ .+.++|.++|.++.++|+.
T Consensus       310 ~~--------~l~ril~~ae~~t~~pSg~sq~iv~a~l~~  341 (472)
T KOG0634|consen  310 SL--------FLKRILDLAEVATSGPSGFSQGIVYAMLKR  341 (472)
T ss_pred             HH--------HHHHHhhhcceeecCcccccHHHHHHHHHH
Confidence            52        6777766644 4577999999999988763

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.95  E-value=6.2e-27  Score=218.65  Aligned_cols=242  Identities=17%  Similarity=0.114  Sum_probs=181.0

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcH---HHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAA---VAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~---~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      .+.++|+|+.|+|.  +.+.+++   .+.+++.+++..+. .+|.+..|..+||++++++++        .+++++|+|+
T Consensus        34 ~g~~~~~L~~g~p~--~D~~tds~t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreaia~~~~--------~~~vv~t~gg  102 (460)
T PRK13238         34 AGYNPFLLKSEDVF--IDLLTDSGTGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAVKDIFG--------YPYTIPTHQG  102 (460)
T ss_pred             cCCCEEeCCCCCCC--CCCCCCCCchhhhHHHHHHHHhCC-cccCCCCCHHHHHHHHHHHhC--------CCcEEECCCH
Confidence            48899999999983  1244444   67888777776544 479999999999999999994        3579999999


Q ss_pred             HHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC------CCcc--cCHHHHHhhcCC----CccE
Q 021547          120 MEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE------RGWE--VDLEAVEALADE----NTAA  187 (311)
Q Consensus       120 ~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~------~~~~--~d~~~l~~~l~~----~~~~  187 (311)
                      ++|+.+++.+++++| | |+++.|.|..|...++..|.+++.+++...      ++|.  +|++.|++.+++    ++++
T Consensus       103 t~A~~~~~~all~pG-D-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~  180 (460)
T PRK13238        103 RAAEQILFPVLIKKG-D-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPF  180 (460)
T ss_pred             HHHHHHHHHHhCCCC-C-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeE
Confidence            999999999999999 9 999999999999999999999999988542      3444  999999999873    6899


Q ss_pred             EEEeCCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEecccc--CCccCC-----CCCCcccccCCCCCeEEEecCcccCC
Q 021547          188 IVIINPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYG--HLAFGS-----TPYIPMGVFGSIVPVITLGSISKRWI  259 (311)
Q Consensus       188 i~i~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~--~~~~~~-----~~~~~~~~~~~~~~~i~i~s~sK~~~  259 (311)
                      +++++|+||+| .+++.+++++|.++|++||++||+|+++.  ...|..     ....++..+     ++.++|++|.+.
T Consensus       181 Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i-----~~~~~s~~D~~~  255 (460)
T PRK13238        181 IVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI-----AREMFSYADGLT  255 (460)
T ss_pred             EEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH-----hhhhcccCcEEE
Confidence            99999999997 99999999999999999999999999773  243421     122222211     123345555555


Q ss_pred             CCccee------eEEEeeCCCCccchhhHHHHHhhhh----c-cccCC-CchhHHHHHhhhh
Q 021547          260 VPGWRF------GWLATNDPNGVLQKSGIVGSIKACL----G-VRSGP-STLIQVCEMFLLV  309 (311)
Q Consensus       260 ~~G~r~------G~i~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~-~~~~q~~~~~~l~  309 (311)
                      ++|+|+      |+++++++       ++.++++...    + .+.+. +...|.+++..|+
T Consensus       256 ~Sg~K~g~~~~GG~i~~~d~-------~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~  310 (460)
T PRK13238        256 MSAKKDAMVNIGGLLCFRDE-------DLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLY  310 (460)
T ss_pred             EecccCCCCcceeEEEcChH-------HHHHHhhhcccccCCcccccCcHHHHHHHHHhhHH
Confidence            555554      35555432       4777776653    2 23333 4444777776554

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=99.94  E-value=1.9e-25  Score=194.06  Aligned_cols=271  Identities=24%  Similarity=0.362  Sum_probs=209.3

Q ss_pred             HHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCC---------------------cHHHHHHHHHHHh--cCCCCCCCCC
Q 021547           30 YAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRT---------------------AAVAEDAIVDSVR--SSMFNCYAPM   86 (311)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~---------------------~~~~~~a~~~~~~--~~~~~~Y~~~   86 (311)
                      ++-+++... .+..-+.+|+-++|+|..-.+.|.                     |..+++...+.+.  .+..-.|+.+
T Consensus        34 El~~eL~~~-~~~PF~eiI~aNIGnpqamgQ~PiTF~RQvlal~~~p~lLd~~~fp~Dai~RA~~~L~~~gGs~GaYS~S  112 (475)
T KOG0258|consen   34 ELEKELKKG-VKKPFDEIIRANIGNPQAMGQKPITFLRQVLALCQYPELLDSPEFPTDAIKRAKRILNDCGGSLGAYSDS  112 (475)
T ss_pred             HHHHHHHhc-ccCChHHHHhhcCCCHHHhCCCChhHHHHHHHHhcChhhcCCCCCCHHHHHHHHHHHHhcCCcccccccc
Confidence            444444443 333457788888888753222211                     1122222233333  2345579999


Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcCcEEEEeecc
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR-LGAANILLPRPGWPFYESFAKRNHIEVRHFDLL  165 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~  165 (311)
                      .|++-+|+.||+|+.++.|.+.++++|++|+|++.|+..++..++. +. +.|++|.|.|+-|...+..+|...+.+-++
T Consensus       113 qGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~-~GvliPiPQYPLYsAti~l~~~~~v~YyLd  191 (475)
T KOG0258|consen  113 QGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKK-TGVLIPIPQYPLYSATISLLGGTQVPYYLD  191 (475)
T ss_pred             cCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCC-CceEeecCCCchhHHHHHHhCCcccceeec
Confidence            9999999999999999999999999999999999999999999985 55 899999999999999999999999999999


Q ss_pred             CCCCcccCHHHHHhhcCC-----CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC-CCCCcc
Q 021547          166 PERGWEVDLEAVEALADE-----NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS-TPYIPM  239 (311)
Q Consensus       166 ~~~~~~~d~~~l~~~l~~-----~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~-~~~~~~  239 (311)
                      .+.+|.+|.++|++.+.+     +++++++.||.||||.+++.+.+++|+.+|.+++++++.||+|....|.+ .++.++
T Consensus       192 Ee~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSf  271 (475)
T KOG0258|consen  192 EESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSF  271 (475)
T ss_pred             cccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhH
Confidence            999999999999987653     78899999999999999999999999999999999999999999988864 355554


Q ss_pred             ccc----C----CCCCeEEEecCcccCCC-CcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhh
Q 021547          240 GVF----G----SIVPVITLGSISKRWIV-PGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFL  307 (311)
Q Consensus       240 ~~~----~----~~~~~i~i~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~  307 (311)
                      ...    .    +..-++..+|.||.+-. .|.|-||+-+-+..     ++..+.+....+...|++...|..+-..
T Consensus       272 KKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~-----prv~~qi~Kl~si~lc~~V~GQ~~vdl~  343 (475)
T KOG0258|consen  272 KKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRD-----PRVKQQIKKLASIKLCPQVSGQKLVDLV  343 (475)
T ss_pred             HHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCC-----hhHHHHHHHHHhhhhcCCccchhhhcee
Confidence            322    1    12237899999998644 68999998775532     3466666666555567777777765443

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.93  E-value=4.5e-25  Score=192.64  Aligned_cols=281  Identities=19%  Similarity=0.207  Sum_probs=212.9

Q ss_pred             HhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHH
Q 021547           22 EAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL  100 (311)
Q Consensus        22 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l  100 (311)
                      +++...|..+.+.    +.+...++.||+++|.. +.....|.-+.|.++-+.........+|-+-.|.+++++.+++++
T Consensus         7 ~~p~DpIlgL~e~----f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ll   82 (396)
T COG1448           7 AAPADPILGLKEA----FKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLL   82 (396)
T ss_pred             cCCCCchhHHHHH----HhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHh
Confidence            3566777777765    33346789999999932 222346677888888777777777778999999999999999999


Q ss_pred             hhcCCCC---CCCCCE--EEeCChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccC
Q 021547          101 NRDLPYK---LSADDI--YITLGCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVD  173 (311)
Q Consensus       101 ~~~~g~~---~~~~~v--~~t~g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  173 (311)
                         +|.+   +..+++  +-|.|||+|+......+..  +. .+|.+++|+|+++..+++..|.++..+|..+..+..+|
T Consensus        83 ---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~-~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~d  158 (396)
T COG1448          83 ---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPD-ATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLD  158 (396)
T ss_pred             ---cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCC-ceEEeCCCCcHhHHHHHHhcCCceeeeecccccccccc
Confidence               5533   344555  5589999999999998865  44 57999999999999999999999999999877777899


Q ss_pred             HHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCcccccCCCC-Ce
Q 021547          174 LEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIPMGVFGSIV-PV  248 (311)
Q Consensus       174 ~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~~~~~~~~~-~~  248 (311)
                      .+.+.+.++.   +...++-..+|||||.-++.++|++|+++.++.+++.+.|-+|++|.-+-. ....+..+.... .+
T Consensus       159 f~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~  238 (396)
T COG1448         159 FDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPEL  238 (396)
T ss_pred             HHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcE
Confidence            8888776653   333334444599999999999999999999999999999999999754311 111222222222 38


Q ss_pred             EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhcC
Q 021547          249 ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVNK  311 (311)
Q Consensus       249 i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~  311 (311)
                      ++..|+||+||+.|.|+|.+.+..++... ...+.++++.. ++..++|+.-...+++.+|+|.
T Consensus       239 lva~S~SKnfgLYgERVGa~~vva~~~~~-a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p  301 (396)
T COG1448         239 LVASSFSKNFGLYGERVGALSVVAEDAEE-ADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNP  301 (396)
T ss_pred             EEEehhhhhhhhhhhccceeEEEeCCHHH-HHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCH
Confidence            99999999999999999997765443222 12355566655 4556788899999999998873

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.93  E-value=2.3e-24  Score=199.13  Aligned_cols=213  Identities=16%  Similarity=0.145  Sum_probs=163.8

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---Cc----HHHHHHHHHHHhhcCCCCCCCCCEEE
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF---GL----PLARRAVAEYLNRDLPYKLSADDIYI  115 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~---g~----~~lr~~ia~~l~~~~g~~~~~~~v~~  115 (311)
                      +++++|+|+.|++   ++++.+|.+++++.+.+..... +|+.+.   |.    .++|++++++++        .+++++
T Consensus        36 ~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~~~~~-~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii  103 (393)
T TIGR01822        36 DGREVLNFCANNY---LGLSSHPDLIQAAKDALDEHGF-GMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTIL  103 (393)
T ss_pred             CCceEEEeeCCCc---cccCCCHHHHHHHHHHHHHhCC-CCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEE
Confidence            4788999999984   4678899999999998875322 565555   65    788999999884        257888


Q ss_pred             eCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEE
Q 021547          116 TLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIV  189 (311)
Q Consensus       116 t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~  189 (311)
                      ++|+++|+..++.+++++| |.|+++.|.|+.+...++..+.+.+.++       ..|++++++.+++      ++++++
T Consensus       104 ~~~~~~a~~~~~~~l~~~g-d~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~  175 (393)
T TIGR01822       104 YASCFDANGGLFETLLGAE-DAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIA  175 (393)
T ss_pred             ECchHHHHHHHHHHhCCCC-CEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEE
Confidence            8899999999999999999 9999999999999988888887665442       2688888887764      677888


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCcceeeE
Q 021547          190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW  267 (311)
Q Consensus       190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~  267 (311)
                      +.+++||||.+.+   +++|+++|++||++||+|++|+...++  +........+. .+..++++|+||.+  +|+|+||
T Consensus       176 ~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l--~g~r~G~  249 (393)
T TIGR01822       176 TDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKAL--GGASGGF  249 (393)
T ss_pred             EeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHh--hCCCcEE
Confidence            8888999999988   999999999999999999999643222  11111111111 23469999999985  4789999


Q ss_pred             EEeeCCCCccchhhHHHHHhhh
Q 021547          268 LATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       268 i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      ++++.        ++++.++..
T Consensus       250 ~~~~~--------~~~~~l~~~  263 (393)
T TIGR01822       250 TTARK--------EVVELLRQR  263 (393)
T ss_pred             EEeCH--------HHHHHHHHh
Confidence            88753        366666553

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.93  E-value=1.3e-24  Score=200.59  Aligned_cols=223  Identities=17%  Similarity=0.117  Sum_probs=173.7

Q ss_pred             CCCCeeecCCCCC--CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           43 DPRPVIPLGHGDP--AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        43 ~~~~~i~~~~g~p--~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      .+.+++.|..+++  ++.....+ ..+.+++..++..+.. .|.++.|..+||+++++++.        .+++++|+|++
T Consensus         9 ~g~n~~~l~~~~v~iDlltds~t-~ams~~~~~a~~~gd~-~Y~~~~g~~~Leeaia~~~g--------~~~vv~t~~Gt   78 (431)
T cd00617           9 AGYNVFLLRSEDVYIDLLTDSGT-GAMSDYQWAAMMLGDE-AYAGSKSFYDLEDAVQDLFG--------FKHIIPTHQGR   78 (431)
T ss_pred             cCCCEEeCCCCCcCCCCCCCCCc-HHHHHHHHHHHHhCCC-ccCCCCCHHHHHHHHHHHHC--------CCeEEEcCCHH
Confidence            4899999999998  53322222 4666666666655443 69999999999999999994        35899999999


Q ss_pred             HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC--------CcccCHHHHHhhcCCC----ccEE
Q 021547          121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER--------GWEVDLEAVEALADEN----TAAI  188 (311)
Q Consensus       121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~d~~~l~~~l~~~----~~~i  188 (311)
                      +|+.+++.+++++| |.| ++.|.|..+...+...|.+++.+++....        .+.+|++.|++.++++    +++|
T Consensus        79 ~Al~la~~al~~pG-D~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I  156 (431)
T cd00617          79 GAENILFSILLKPG-RTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYI  156 (431)
T ss_pred             HHHHHHHHHhCCCC-CEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEE
Confidence            99999999999999 977 68999999999999999999999986543        2459999999998865    7889


Q ss_pred             EEeCCCCCC-ccCCCHHHHHHHHHHHHHhCCEEEEeccccC--Ccc-----CCCCCCcccccCCCCCeEEEecCcccCCC
Q 021547          189 VIINPCNPC-GNVLTYQHLQKIAETARKLGILVIADEVYGH--LAF-----GSTPYIPMGVFGSIVPVITLGSISKRWIV  260 (311)
Q Consensus       189 ~i~~p~npt-G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~--~~~-----~~~~~~~~~~~~~~~~~i~i~s~sK~~~~  260 (311)
                      ++++|+||+ |+.++.++++++.++|++||++||+|+++..  ..|     ++....++..     .++.++|++|.+.+
T Consensus       157 ~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~e-----i~~e~~s~sd~~~m  231 (431)
T cd00617         157 VLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAE-----IAREMFSYADGCTM  231 (431)
T ss_pred             EEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHH-----HHHHhhccCCEEEE
Confidence            999999998 9999999999999999999999999999542  222     1222222221     13456677777777


Q ss_pred             Ccce------eeEEEeeCCCCccchhhHHHHHhhh
Q 021547          261 PGWR------FGWLATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       261 ~G~r------~G~i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      .|+|      .||++++++       +++++++.+
T Consensus       232 S~~K~~~~~~GG~i~~~d~-------~l~~~~~~~  259 (431)
T cd00617         232 SAKKDGLVNIGGFLALRDD-------ELYEEARQR  259 (431)
T ss_pred             EeecCCCCccceEEEeCcH-------HHHHHHHHh
Confidence            7776      468888653       377777753

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.92  E-value=1.1e-23  Score=193.91  Aligned_cols=272  Identities=17%  Similarity=0.129  Sum_probs=179.5

Q ss_pred             cccccchHHhhHHHHhhhhh-HHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCC
Q 021547            8 KWGFEVKQELNREREAEVAA-FRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNCYA   84 (311)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~   84 (311)
                      +|..+++...+++|.++.-+ ++-+.+.--.++. .+++++|+|+.+++   +++.++|.+++++.+.+....  ...|.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~   77 (385)
T PRK05958          2 SWLDRLEAALAQRRAAGLYRSLRPREGGAGRWLV-VDGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSR   77 (385)
T ss_pred             cHHHHHHHHHHHHHHcCCCccccccccCCCceeE-eCCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcC
Confidence            58888877777766655332 2222222223333 36899999999863   245678899999999886421  11233


Q ss_pred             CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeec
Q 021547           85 PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL  164 (311)
Q Consensus        85 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~  164 (311)
                      ...|...+++.+++.+.+.++   . ++.++++++++++..++..++++| |.|+++.|.|+.+...++..|.+++.++.
T Consensus        78 ~~~g~~~~~~~l~~~la~~~~---~-~~~i~~~~g~~~~~~~l~~~~~~g-d~V~~~~~~~~~~~~~~~~~g~~~~~~~~  152 (385)
T PRK05958         78 LVTGNSPAHEALEEELAEWFG---A-ERALLFSSGYAANLAVLTALAGKG-DLIVSDKLNHASLIDGARLSRARVRRYPH  152 (385)
T ss_pred             cccCCcHHHHHHHHHHHHHhC---C-CcEEEECcHHHHHHHHHHHhCCCC-CEEEEeCccCHHHHHHHHhcCCceEEeCC
Confidence            333444444444444444333   2 345555556667777778889999 99999999999999888999998888764


Q ss_pred             cCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcc
Q 021547          165 LPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPM  239 (311)
Q Consensus       165 ~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~  239 (311)
                             .|++.+++.+++   ++.++++.+++|++|...+   +++|.++|++||+++|+||+|+...++  +......
T Consensus       153 -------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~  222 (385)
T PRK05958        153 -------NDVDALEALLAKWRAGRALIVTESVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAE  222 (385)
T ss_pred             -------CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHh
Confidence                   378888887764   2444555567899999887   999999999999999999999765443  3222221


Q ss_pred             cccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh---ccccCCCchhHHHHHhhhh
Q 021547          240 GVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL---GVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       240 ~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~  309 (311)
                      ..++..+++|++.|+||.|+.+|   ||++++.        ++++.+....   ..+..++++.++++.+.|+
T Consensus       223 ~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~  284 (385)
T PRK05958        223 AGLAGEPDVILVGTLGKALGSSG---AAVLGSE--------TLIDYLINRARPFIFTTALPPAQAAAARAALR  284 (385)
T ss_pred             hCCCCCCceEEEEechhhcccCC---cEEEcCH--------HHHHHHHHhCccceecCCCCHHHHHHHHHHHH
Confidence            22334557899999999998877   9987642        3555554321   1223355555555544443

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.92  E-value=1.4e-23  Score=193.29  Aligned_cols=237  Identities=15%  Similarity=0.159  Sum_probs=176.5

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      +++++++|+.|++   +.++++|.+.+++.+.+...  ....|....|..++++.+++++.+.+|.   ++.+++++| +
T Consensus        31 ~g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~~sG-~  103 (385)
T TIGR01825        31 NGKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVFQSG-F  103 (385)
T ss_pred             CCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEECcH-H
Confidence            5789999999863   35778899999999988632  2335777789999999999999987762   356777777 5


Q ss_pred             HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC----CccEEEEeCCCCC
Q 021547          121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----NTAAIVIINPCNP  196 (311)
Q Consensus       121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~i~i~~p~np  196 (311)
                      +++..++.+++++| |.|+++.|.|..+...+...|.+++.++       .+|.+++++.+++    +++++++.+++||
T Consensus       104 ~a~~~a~~~~~~~g-d~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~  175 (385)
T TIGR01825       104 NTNQGVLSALLRKG-DIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSM  175 (385)
T ss_pred             HHHHHHHHHhCCCC-CEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcC
Confidence            66778888889999 9999999999998888888888776653       3577777776543    6778888888999


Q ss_pred             CccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547          197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN  274 (311)
Q Consensus       197 tG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~  274 (311)
                      ||...+   +++|.++|++||+++|+||+|+.+.++  +........+. .+.+|++.|+||.|+++|   ||++++.  
T Consensus       176 tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g---G~~~~~~--  246 (385)
T TIGR01825       176 DGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG---GYAAGHK--  246 (385)
T ss_pred             CCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC---CEEecCH--
Confidence            999988   899999999999999999999876553  22111111122 346899999999998776   9988643  


Q ss_pred             CccchhhHHHHHhhhhc---cccCCCchhHHHHHhhhh
Q 021547          275 GVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       275 ~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l~  309 (311)
                            ++++.+.....   .+...++..|+++.+.|+
T Consensus       247 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~  278 (385)
T TIGR01825       247 ------ELIEYLKNRARPFLFSTAQPPAVVAALAAAVD  278 (385)
T ss_pred             ------HHHHHHHHhCccccccCCCCHHHHHHHHHHHH
Confidence                  36666654321   223345666777666553

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.92  E-value=2e-23  Score=193.01  Aligned_cols=218  Identities=15%  Similarity=0.075  Sum_probs=164.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF--NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      +++++|+|+.|++   +.+++++.+.+++.+.+.....  ..|....|..++++++++++.+.+|.   +++|++|+| +
T Consensus        40 ~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~  112 (397)
T PRK06939         40 DGKEVINFCANNY---LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-F  112 (397)
T ss_pred             CCCeEEEeeccCc---cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-H
Confidence            5788999999873   3577899999999998865322  12333468889999999999887773   367888887 7


Q ss_pred             HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCC
Q 021547          121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPC  194 (311)
Q Consensus       121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~  194 (311)
                      +++..++.+++++| |.|+++.|+|+.+...++..+.+++.++.       .|++++++.+++      ++++++..+..
T Consensus       113 ~a~~~~~~~l~~~g-d~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~  184 (397)
T PRK06939        113 DANGGLFETLLGKE-DAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVF  184 (397)
T ss_pred             HHHHHHHHHhCCCC-CEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCc
Confidence            78888999999999 99999999999999899999988877653       377888776653      56677766678


Q ss_pred             CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc--CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF--GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      |++|...+   +++|.++|+++|++||+||+|....+  .+........+. ...+|+++|+||.++  |+|+||++++.
T Consensus       185 ~~~G~~~~---~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~--g~r~G~v~~~~  258 (397)
T PRK06939        185 SMDGDIAP---LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGTLGKALG--GASGGYTAGRK  258 (397)
T ss_pred             CCCCCcCC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEECHHHhC--ccCceEEEeCH
Confidence            99998766   99999999999999999999963222  222111111221 234699999999973  56999999753


Q ss_pred             CCCccchhhHHHHHhhh
Q 021547          273 PNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       273 ~~~~~~~~~~~~~~~~~  289 (311)
                              ++++.+...
T Consensus       259 --------~~~~~l~~~  267 (397)
T PRK06939        259 --------EVIDWLRQR  267 (397)
T ss_pred             --------HHHHHHHHh
Confidence                    366776654

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.92  E-value=2.9e-23  Score=189.29  Aligned_cols=233  Identities=14%  Similarity=0.133  Sum_probs=166.0

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNCYAPMF----GLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~----g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      ++.++|+|+.|+|   .+++.++.+++++.+.+....  ...|....    ...+++++++++++       .+++++++
T Consensus        14 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~~   83 (360)
T TIGR00858        14 DGRRLLNFSSNDY---LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLFS   83 (360)
T ss_pred             CCceEEecccCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence            5889999999964   245677999999999886411  11222222    34557777777773       24567777


Q ss_pred             CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC----CccEEEEeC
Q 021547          117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----NTAAIVIIN  192 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~i~i~~  192 (311)
                      +|+ +++..++.+++++| |+|+++.|+|..+...++..|.+++.++.       +|.+.+++.++.    +++++++.+
T Consensus        84 ~G~-~~~~~~l~~~~~~g-d~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~  154 (360)
T TIGR00858        84 SGY-LANVGVISALVGKG-DLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDG  154 (360)
T ss_pred             chH-HHHHHHHHHhCCCC-CEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeC
Confidence            775 55556778888999 99999999999999999999998887753       478888887754    467778888


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC--CCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST--PYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~--~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      ++||+|...+   +++|.++|+++|++||+||+|....++..  +......+..++++|+++|+||.|+++|   ||+++
T Consensus       155 ~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~  228 (360)
T TIGR00858       155 VFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAG  228 (360)
T ss_pred             CccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEc
Confidence            8999999888   89999999999999999999986555432  2222222334567899999999998877   99887


Q ss_pred             eCCCCccchhhHHHHHhhhhc---cccCCCchhHHHHHhhh
Q 021547          271 NDPNGVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l  308 (311)
                      +.        ++++.++....   .....++..++++.+.+
T Consensus       229 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al  261 (360)
T TIGR00858       229 SQ--------ALIDYLINRARTLIFSTALPPAVAAAALAAL  261 (360)
T ss_pred             CH--------HHHHHHHHhCccceecCCCCHHHHHHHHHHH
Confidence            43        36666654321   12234455444544444

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.92  E-value=8.4e-24  Score=191.41  Aligned_cols=221  Identities=13%  Similarity=0.077  Sum_probs=163.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL  140 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~  140 (311)
                      +++++.+++++.+.....  ..|.+..+..++++.++++++        ++++++++|+++++..++.+++++| |+|++
T Consensus         8 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~g--------~~~~~~~~~gt~a~~~~~~~l~~~g-d~v~~   76 (338)
T cd06502           8 TGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELFG--------KEAALFVPSGTAANQLALAAHTQPG-GSVIC   76 (338)
T ss_pred             CCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHhC--------CCeEEEecCchHHHHHHHHHhcCCC-CeEEE
Confidence            568899999998865432  257666677888888888873        4578888888999999999999999 99999


Q ss_pred             cCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-------CccEEEEeCCCCCCccCCCHHHHHHHH
Q 021547          141 PRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-------NTAAIVIINPCNPCGNVLTYQHLQKIA  210 (311)
Q Consensus       141 ~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~i~i~~p~nptG~~~~~~~l~~l~  210 (311)
                      +.|+|..+..   .....|.+++.++..   .+.+|++.+++++++       +++++++++|+|| |..++.+++++|+
T Consensus        77 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~  152 (338)
T cd06502          77 HETAHIYTDEAGAPEFLSGVKLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAIS  152 (338)
T ss_pred             ecCcceeeecCCcHHHHcCceEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHH
Confidence            9999976432   355689999988753   357899999998864       6889999999997 6677999999999


Q ss_pred             HHHHHhCCEEEEeccccCCc--cCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh
Q 021547          211 ETARKLGILVIADEVYGHLA--FGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA  288 (311)
Q Consensus       211 ~l~~~~~~~li~D~ay~~~~--~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~  288 (311)
                      ++|+++|+++|+|++|....  ..+.   .+..+....+ +++.|+||+|+++|   |++++.++       +++++++.
T Consensus       153 ~~~~~~~~~livDea~~~~~~~~~~~---~~~~~~~~~d-~~~~s~sK~~~~~~---g~~~~~~~-------~~~~~~~~  218 (338)
T cd06502         153 ALAKENGLPLHLDGARLANAAAALGV---ALKTYKSGVD-SVSFCLSKGGGAPV---GAVVVGNR-------DFIARARR  218 (338)
T ss_pred             HHHHHcCCeEeechHHHHHHHHhcCC---CHHHHHhcCC-EEEEeccccCCCcc---ceEEECCH-------HHHHHHHH
Confidence            99999999999999986432  1122   2222211223 56889999999887   66554433       36666665


Q ss_pred             hhc---cccCCCchhHHHHHhhhhc
Q 021547          289 CLG---VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       289 ~~~---~~~~~~~~~q~~~~~~l~~  310 (311)
                      ...   .....+++.|+++...|++
T Consensus       219 ~~~~~~~~~~~~~~~~~a~~~~L~~  243 (338)
T cd06502         219 RRKQAGGGMRQSGFLAAAGLAALEN  243 (338)
T ss_pred             HHHHhCCChhhHHHHHHHHHHHhcC
Confidence            431   2334567778887777654

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>PRK07049 methionine gamma-lyase; Validated

Probab=99.92  E-value=3.6e-23  Score=192.07  Aligned_cols=197  Identities=15%  Similarity=0.147  Sum_probs=152.5

Q ss_pred             CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcC
Q 021547           81 NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNH  156 (311)
Q Consensus        81 ~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g  156 (311)
                      .+|+. +....|++.++++..        .+++++++||++++..++.+++++| |.|+++.|.|..+...+    +..|
T Consensus        78 ~R~~~-Pt~~~Le~~lA~leg--------~~~~iv~~sG~~Ai~~~l~al~~~G-d~Vv~~~p~Y~~~~~~~~~~l~~~G  147 (427)
T PRK07049         78 SRFNH-PNSEIVEDRLAVYEG--------AESAALFSSGMSAIATTLLAFVRPG-DVILHSQPLYGGTETLLAKTFRNFG  147 (427)
T ss_pred             cCCCC-cCHHHHHHHHHHHhC--------CCcEEEEccHHHHHHHHHHHHhCCC-CEEEEcCCCcccHHHHHHHHHHhcC
Confidence            44554 456899999999883        4578999999999999999999999 99999999999986653    5678


Q ss_pred             cEEEEeeccCCCCcccCHHHHHhhcC-----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH---hCCEEEEeccccC
Q 021547          157 IEVRHFDLLPERGWEVDLEAVEALAD-----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARK---LGILVIADEVYGH  228 (311)
Q Consensus       157 ~~~~~~~~~~~~~~~~d~~~l~~~l~-----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~---~~~~li~D~ay~~  228 (311)
                      ++++.++.      ..|.+.+++.+.     ++++++++++|+||||.+++.+++.+|++.|..   +++++|+|++|..
T Consensus       148 i~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~  221 (427)
T PRK07049        148 VGAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG  221 (427)
T ss_pred             cEEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence            88766642      146666765542     578999999999999999998888888887654   6899999999875


Q ss_pred             CccCCCCCCcccccCCCCCeEEEecCcccCC-CCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHh
Q 021547          229 LAFGSTPYIPMGVFGSIVPVITLGSISKRWI-VPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMF  306 (311)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~  306 (311)
                      ..+.    .++.    .++.|+++|+||.|+ .+|+|+||++++.        ++++.++.... .+.+.+++.|+++.+
T Consensus       222 ~~~~----~pl~----~g~divv~S~SK~~gG~~glr~G~vv~~~--------~l~~~l~~~~~~~g~~ls~~~a~l~~r  285 (427)
T PRK07049        222 PVFQ----KPLE----HGADLSVYSLTKYVGGHSDLVAGAVLGRK--------ALIRQVRALRSAIGTQLDPHSCWMLGR  285 (427)
T ss_pred             cccC----Cccc----cCCCEEEEcCceeecCCCCcEEEEEECCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence            4321    1221    124589999999999 5999999998642        36777766643 456789999999887


Q ss_pred             hhh
Q 021547          307 LLV  309 (311)
Q Consensus       307 ~l~  309 (311)
                      .|+
T Consensus       286 ~L~  288 (427)
T PRK07049        286 SLE  288 (427)
T ss_pred             CCC
Confidence            765

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=99.91  E-value=1.1e-22  Score=184.05  Aligned_cols=213  Identities=16%  Similarity=0.168  Sum_probs=157.4

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCE
Q 021547           59 PCFRTAAVAEDAIVDSVRSSMFNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAAN  137 (311)
Q Consensus        59 ~~~~~~~~~~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~  137 (311)
                      .++..+|.++++..+.++.     |. ...-..++++.+++++    |  ++++++++++|+++++..++.+++++| |.
T Consensus        30 lgl~~~~~~~~~~~~~~~~-----~~g~~~~~~~Le~~lA~~~----g--~~~e~ilv~~gg~~a~~~~~~al~~~g-d~   97 (346)
T TIGR03576        30 TGLAGGFKIDEEDLELLET-----YVGPAIFEEKVQELGREHL----G--GPEEKILVFNRTSSAILATILALEPPG-RK   97 (346)
T ss_pred             ccCCCChhHHHHHHHHHHH-----hcCCHHHHHHHHHHHHHHc----C--CCcceEEEECCHHHHHHHHHHHhCCCC-CE
Confidence            3456678888888888762     31 1223445555666555    3  467899999999999999999999999 99


Q ss_pred             EEec---CCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547          138 ILLP---RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETAR  214 (311)
Q Consensus       138 Vl~~---~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~  214 (311)
                      |+++   .|.|..|...++..|.++..+         .+++.++.  .+++++++++ +++++|.+++.+++++|+++|+
T Consensus        98 Vli~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~  165 (346)
T TIGR03576        98 VVHYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK--IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAK  165 (346)
T ss_pred             EEECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh--CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHH
Confidence            9974   579999999999999876432         14454433  2456777764 5789999999999999999999


Q ss_pred             HhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-
Q 021547          215 KLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-  291 (311)
Q Consensus       215 ~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-  291 (311)
                      ++|+++++||+|+.+..+  +..  +...+.   ..+++.|+||  +++|+|+||++++.        ++++.++.... 
T Consensus       166 ~~~~~livDEAy~~~~~~~~~~~--~~~~~~---~divv~s~SK--alaG~r~G~v~~~~--------~li~~l~~~~~~  230 (346)
T TIGR03576       166 SKEAIVLVDDASGARVRRLYGQP--PALDLG---ADLVVTSTDK--LMDGPRGGLLAGRK--------ELVDKIKSVGEQ  230 (346)
T ss_pred             HcCCEEEEECCccccccccCCCC--CHHHcC---CcEEEeccch--hccccceEEEEeCH--------HHHHHHHHhhcC
Confidence            999999999999976432  221  111221   2277889999  47899999999853        47888887744 


Q ss_pred             cccCCCchhHHHHHhhhhc
Q 021547          292 VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       292 ~~~~~~~~~q~~~~~~l~~  310 (311)
                      ...+.+++.|+++.+.|+.
T Consensus       231 ~~~s~~~~~~~aa~~aL~~  249 (346)
T TIGR03576       231 FGLEAQAPLLAAVVRALEE  249 (346)
T ss_pred             cccCccHHHHHHHHHHHhh
Confidence            3345688899998888753

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>PLN02822 serine palmitoyltransferase

Probab=99.91  E-value=2.5e-23  Score=195.88  Aligned_cols=241  Identities=12%  Similarity=0.093  Sum_probs=173.7

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF------NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      ++++++||+.+++   +++..+|.+++++.++++....      ..|.+..+..+|++++++++.       .++.|+++
T Consensus       107 ~G~~~id~~s~~~---lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s  176 (481)
T PLN02822        107 NGKDVVNFASANY---LGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYS  176 (481)
T ss_pred             CCceEEEeECCCc---CCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence            4788999999974   4567799999999999875211      135566678999999999995       34678888


Q ss_pred             CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc--CCCc-cEEEEeCC
Q 021547          117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA--DENT-AAIVIINP  193 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l--~~~~-~~i~i~~p  193 (311)
                      +|.+ ++..++.+++++| |.|++....|..+...+...+.+++.++..+.+++..+++.+++..  .+++ +++++..+
T Consensus       177 ~G~~-a~~sai~a~~~~g-d~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i  254 (481)
T PLN02822        177 YGLS-TIFSVIPAFCKKG-DIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAI  254 (481)
T ss_pred             CHHH-HHHHHHHHhCCCC-CEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecC
Confidence            8777 6788999999999 9999998888888788888999999887643222333333333221  1234 57777788


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc--CCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF--GSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~--~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      ++++|.+.+   +++|.++|++||+++|+||+|+...++.........+  ......|++.||||.|+++|   ||++++
T Consensus       255 ~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~  328 (481)
T PLN02822        255 YQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGS  328 (481)
T ss_pred             CCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcC
Confidence            899999999   8999999999999999999999766652211111122  11245699999999999999   999875


Q ss_pred             CCCCccchhhHHHHHhhh-hcccc--CCCchhHHHHHhhhh
Q 021547          272 DPNGVLQKSGIVGSIKAC-LGVRS--GPSTLIQVCEMFLLV  309 (311)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~q~~~~~~l~  309 (311)
                      .        ++++.++.. ....+  +.+++.|+++.+.|+
T Consensus       329 ~--------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~  361 (481)
T PLN02822        329 A--------RVVDHQRLSSSGYVFSASLPPYLASAAITAID  361 (481)
T ss_pred             H--------HHHHHHHhcCCceeeccccCHHHHHHHHHHHH
Confidence            3        367766643 22233  334666777665553

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.91  E-value=2.9e-22  Score=185.68  Aligned_cols=203  Identities=18%  Similarity=0.144  Sum_probs=156.1

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCC------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN--CYAP------MFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~--~Y~~------~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      ++.+.|+++.-     .+.++.+.+++.+.+......  ....      ...+.++|+.++++++.     .++++|++|
T Consensus        18 ~~~~yld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~-----~~~~~i~~~   87 (401)
T PRK10874         18 DAGVYLDSAAT-----ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNA-----PDAKNIVWT   87 (401)
T ss_pred             CceEEEeCCcc-----cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCC-----CCCCEEEEE
Confidence            45789999873     356788999998887532110  0000      11256788888888732     167899999


Q ss_pred             CChHHHHHHHHHHHh----cCCCCEEEecCCCCcc----hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEE
Q 021547          117 LGCMEAVEIILTVIT----RLGAANILLPRPGWPF----YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAI  188 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~----~~g~d~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i  188 (311)
                      +|+++++..++.++.    ++| |+|+++++.|++    +...++..|.+++.++..  .++.+|++++++.++++++++
T Consensus        88 ~~~t~~i~~~~~~~~~~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv  164 (401)
T PRK10874         88 RGTTESINLVAQSYARPRLQPG-DEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLG--ADRLPDVDLLPELITPRTRIL  164 (401)
T ss_pred             CCHHHHHHHHHHHhhhccCCCc-CEEEECCcchHHHHHHHHHHHHHhCCEEEEEecC--CCCcCCHHHHHHhcCcCcEEE
Confidence            999999999999983    689 999999999864    456678899999999874  356789999999999999999


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547          189 VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL  268 (311)
Q Consensus       189 ~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i  268 (311)
                      ++++|+||||..++   +++|+++|+++|+++|+|++|+...+    ...+..+   +..+++.|++|.||.+|  +||+
T Consensus       165 ~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~----~~~~~~~---~~d~~~~s~~K~~gp~G--~G~l  232 (401)
T PRK10874        165 ALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF----PADVQAL---DIDFYAFSGHKLYGPTG--IGVL  232 (401)
T ss_pred             EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc----cCCchhc---CCCEEEEecccccCCCc--cEEE
Confidence            99999999999998   88999999999999999999974222    1222222   23488899999887777  5888


Q ss_pred             EeeC
Q 021547          269 ATND  272 (311)
Q Consensus       269 ~~~~  272 (311)
                      +++.
T Consensus       233 ~~~~  236 (401)
T PRK10874        233 YGKS  236 (401)
T ss_pred             EEch
Confidence            7653

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.91  E-value=2.6e-22  Score=185.80  Aligned_cols=203  Identities=18%  Similarity=0.147  Sum_probs=156.5

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCC-------CCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPM-------FGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~-------~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      ++++.|+++.-     .+.|+.+.+++.+.+..... ..+...       ..+.++|+.++++++.     .++++|++|
T Consensus        15 ~~~iyld~a~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~-----~~~~~i~~t   84 (398)
T TIGR03392        15 DGTVYLDSAAT-----ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNA-----PDAENIVWT   84 (398)
T ss_pred             CCeEEeeCccc-----cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCC-----CCCCeEEEe
Confidence            36899999873     35678899999888752211 112221       1245688889988843     146799999


Q ss_pred             CChHHHHHHHHHHH----hcCCCCEEEecCCCCcc----hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEE
Q 021547          117 LGCMEAVEIILTVI----TRLGAANILLPRPGWPF----YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAI  188 (311)
Q Consensus       117 ~g~~~a~~~~~~~l----~~~g~d~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i  188 (311)
                      +|++++++.++.++    .++| |+|+++.|.|++    +...++..|.+++.++..  .++.+|++.+++.++++++++
T Consensus        85 ~g~t~~l~~~~~~~~~~~~~~g-d~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~~i~~~t~lv  161 (398)
T TIGR03392        85 RGTTESINLVAQSYARPRLQPG-DEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIG--ADLLPDIRQLPELLTPRTRIL  161 (398)
T ss_pred             CChHHHHHHHHHHhhhccCCCC-CEEEECCcchhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHHhccCceEE
Confidence            99999999999998    3689 999999999865    456678899999999874  335689999999999999999


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547          189 VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL  268 (311)
Q Consensus       189 ~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i  268 (311)
                      ++++|+||||.+++   +++|+++|+++|+++++|++|+...+    ...+..++   ..+++.|++|.++.+|  +||+
T Consensus       162 ~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~----~~~~~~~~---~d~~~~s~~K~~gp~G--~G~l  229 (398)
T TIGR03392       162 ALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG----PPDVQALD---IDFYAFSGHKLYGPTG--IGVL  229 (398)
T ss_pred             EEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CCChhhcC---CCEEEEecccccCCCc--eEEE
Confidence            99999999999998   88899999999999999999975322    12222222   2378889999887666  8999


Q ss_pred             EeeC
Q 021547          269 ATND  272 (311)
Q Consensus       269 ~~~~  272 (311)
                      +++.
T Consensus       230 ~~~~  233 (398)
T TIGR03392       230 YGKT  233 (398)
T ss_pred             EEcH
Confidence            8753

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=99.91  E-value=1.1e-22  Score=188.12  Aligned_cols=245  Identities=17%  Similarity=0.160  Sum_probs=175.2

Q ss_pred             CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      ++..+|||..|.+...  ++ .+|.+.+++.+.+.....   ....+..++++.+++++.+..+    .+++++|+|+++
T Consensus        37 dg~~~iD~~~g~~~~~--lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~gg~e  107 (396)
T PRK02627         37 DGKEYLDFLAGIAVNN--LGHCHPKLVEAIQEQAAKLIH---TSNLYYIEPQEELAEKLVELSG----MDKVFFCNSGAE  107 (396)
T ss_pred             CCCEEEECCccHHhcc--CCCCCHHHHHHHHHHHhhccc---cccccCCHHHHHHHHHHHhhcC----CCEEEECCCcHH
Confidence            5788999998854422  33 368999999998864311   1112335788888888887543    379999999999


Q ss_pred             HHHHHHHHHhcCCC------CEEEecCCCCcchHHHHHHcCcEE-EEeeccC-CCCc----ccCHHHHHhhcCCCccEEE
Q 021547          122 AVEIILTVITRLGA------ANILLPRPGWPFYESFAKRNHIEV-RHFDLLP-ERGW----EVDLEAVEALADENTAAIV  189 (311)
Q Consensus       122 a~~~~~~~l~~~g~------d~Vl~~~p~~~~~~~~~~~~g~~~-~~~~~~~-~~~~----~~d~~~l~~~l~~~~~~i~  189 (311)
                      |+.++++.+...+.      ++|++..+.|.++.......+... ......+ ..++    ..|++.+++.+.+++++++
T Consensus       108 A~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vi  187 (396)
T PRK02627        108 ANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVM  187 (396)
T ss_pred             HHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEE
Confidence            99999998765331      579999999987765444433221 1111111 0111    1288999999988899999


Q ss_pred             EeCCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547          190 IINPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL  268 (311)
Q Consensus       190 i~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i  268 (311)
                      +..++||+| ..++++.+++|.++|++||+++|+||+|.++.+.|. +..+......+++   .+|||.++ +|+|+||+
T Consensus       188 i~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~-~~~~~~~~~~pdi---~t~sK~~~-~G~rig~~  262 (396)
T PRK02627        188 LEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK-LFAYQHYGIEPDI---MTLAKGLG-GGVPIGAV  262 (396)
T ss_pred             EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc-eeeehhcCCCCCE---EEEcchhh-CCcccEEE
Confidence            998899999 688999999999999999999999999998866653 2222223222333   37999988 89999999


Q ss_pred             EeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          269 ATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +++.        ++++.+... ...+++.++++|+++.+.|+
T Consensus       263 ~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~  296 (396)
T PRK02627        263 LAKE--------KVADVFTPGDHGSTFGGNPLACAAALAVIE  296 (396)
T ss_pred             EEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            9853        366766543 33467889999999988875

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.91  E-value=1.4e-22  Score=186.96  Aligned_cols=191  Identities=16%  Similarity=0.145  Sum_probs=149.3

Q ss_pred             CC--CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcC
Q 021547           83 YA--PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNH  156 (311)
Q Consensus        83 Y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g  156 (311)
                      |.  +.++..+|+++++++++        .+++++++|+++|+..++.+++++| |+|+++.|.|..+..    .++..|
T Consensus        58 Y~r~~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~G-d~Vl~~~~~y~~~~~~~~~~~~~~G  128 (400)
T PRK06234         58 YSRLGNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAG-DHVVASDTLYGCTFALLNHGLTRYG  128 (400)
T ss_pred             ccCCCCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCC-CEEEEecCccchHHHHHHHHHhhCC
Confidence            55  55688999999999994        3468899999999999999999999 999999999976543    457789


Q ss_pred             cEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh--CCEEEEeccccCCccCCC
Q 021547          157 IEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL--GILVIADEVYGHLAFGST  234 (311)
Q Consensus       157 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~--~~~li~D~ay~~~~~~~~  234 (311)
                      ++++.++..       |++++++.++++++++++++|+||||.+.+   +++|.++|+++  |+++|+|++|+...+. .
T Consensus       129 ~~v~~vd~~-------d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~-~  197 (400)
T PRK06234        129 VEVTFVDTS-------NLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ-R  197 (400)
T ss_pred             eEEEEECCC-------CHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC-C
Confidence            999888642       789999999889999999999999999998   89999999997  9999999999875432 1


Q ss_pred             CCCcccccCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhh--h-ccccCCCchhHHHHHhhh
Q 021547          235 PYIPMGVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKAC--L-GVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       235 ~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~q~~~~~~l  308 (311)
                         ++. .   +..|+++|+||.++++|+++ ||++++.        +++++++..  . ..+...+++..+.+.+-|
T Consensus       198 ---~l~-~---g~Divv~S~sK~l~g~g~~~gG~v~~~~--------~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l  260 (400)
T PRK06234        198 ---PLQ-L---GADVVVHSATKYLNGHGDVIAGFVVGKE--------EFINQVKLFGIKDMTGSVIGPFEAFLIIRGM  260 (400)
T ss_pred             ---chh-h---CCcEEEeeccccccCCCCceeEEEEecH--------HHHHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Confidence               221 1   23499999999999999876 8888753        356665532  1 223455666655555444

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.90  E-value=3.3e-22  Score=182.74  Aligned_cols=201  Identities=16%  Similarity=0.147  Sum_probs=155.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCCC-------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC
Q 021547           61 FRTAAVAEDAIVDSVRSSMFN-------CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL  133 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~-------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~  133 (311)
                      -+..+++.+++.+........       .+...+-+.++++.++++++      +  +++++|+|+++++..++.+++++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~--~~i~~~~g~t~al~~~l~~~~~~   82 (361)
T cd06452          11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLG------M--DEARVTPGAREGKFAVMHSLCEK   82 (361)
T ss_pred             CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcC------C--ceEEEeCCHHHHHHHHHHHhcCC
Confidence            467788999988876421110       11112345788888888883      2  78999999999999999999999


Q ss_pred             CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-------CCccEEEEeCCCCCCccCCCHHHH
Q 021547          134 GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-------ENTAAIVIINPCNPCGNVLTYQHL  206 (311)
Q Consensus       134 g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~~~~i~i~~p~nptG~~~~~~~l  206 (311)
                      | |+|+++.+.|......++..|++++.++.+...++.+|++.+++.++       ++++++++++|+||||...+   +
T Consensus        83 g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~  158 (361)
T cd06452          83 G-DWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---A  158 (361)
T ss_pred             C-CEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---H
Confidence            9 99999999988777788999999999987654456899999998775       36889999999999999877   8


Q ss_pred             HHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHH
Q 021547          207 QKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSI  286 (311)
Q Consensus       207 ~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~  286 (311)
                      ++|.++|+++|+++|+|++|+....   + .....+   +..++++|+||++++ +.|+||++++.        ++++++
T Consensus       159 ~~i~~~~~~~~~~vivD~a~~~g~~---~-~~~~~~---~~d~~~~s~~K~l~~-~~~~G~l~~~~--------~~~~~l  222 (361)
T cd06452         159 KKIAKVCHEYGVPLLLNGAYTVGRM---P-VSGKEL---GADFIVGSGHKSMAA-SAPIGVLATTE--------EWADIV  222 (361)
T ss_pred             HHHHHHHHHcCCeEEEECCcccCCc---C-CCHHHc---CCCEEEecCCccccC-CCCeEEEEECH--------HHHHHH
Confidence            8999999999999999999985211   1 122222   234999999999874 55999999853        366666


Q ss_pred             hhh
Q 021547          287 KAC  289 (311)
Q Consensus       287 ~~~  289 (311)
                      ...
T Consensus       223 ~~~  225 (361)
T cd06452         223 FRT  225 (361)
T ss_pred             hcc
Confidence            543

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=99.90  E-value=1.3e-23  Score=174.06  Aligned_cols=230  Identities=21%  Similarity=0.298  Sum_probs=173.9

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      |++++.++..+...   +|.|.+ .+.        .. .|.+. -..+++.+++.-      -+.++++++++.|+-+.+
T Consensus        40 G~~iv~ld~~e~~r---yPdP~q-~ef--------k~-~~~d~-rnk~ls~a~~~d------kpLt~dnic~GvGsDE~I   99 (375)
T KOG0633|consen   40 GRDIVKLDANENPR---YPDPEQ-MEF--------KY-VYPDP-RNKRLSDALAQD------KPLTSDNICVGVGSDELI   99 (375)
T ss_pred             CCCceEeccccCCC---CcCHHH-ccc--------cc-ccCCc-ccchhhhhcccC------CCCCccceEEecCcHHHH
Confidence            67888888776432   344433 111        11 23332 224445444432      378999999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC--CCccEEEEeCCCCCCccCC
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD--ENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~p~nptG~~~  201 (311)
                      .+++++.|.||+++|+...|+|.-|...+...+++++.+|+.+  +|.++.|.+.+.++  ..+|.+|+++|+||||..+
T Consensus       100 D~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~i  177 (375)
T KOG0633|consen  100 DLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSII  177 (375)
T ss_pred             HHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhccccceEEEEcCCCCCCcccc
Confidence            9999999999999999999999999888899999999999865  78899999988765  3789999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      ..+++.++.+.-.  |.++++||+|-.|.-.   ...+....+.+|++++.+|||.||++|+|+||..++-+        
T Consensus       178 k~~di~KiLe~p~--nglVVvDEAYidFsg~---~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~--------  244 (375)
T KOG0633|consen  178 KEDDILKILEMPD--NGLVVVDEAYIDFSGV---ESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLS--------  244 (375)
T ss_pred             cHHHHHHHHhCCC--CcEEEEeeeeEeeccc---cccchHhHhCCceeehhhhhhhcCcceeEeecccccHH--------
Confidence            9888888887444  8999999999987632   12333345677999999999999999999999988643        


Q ss_pred             HHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          282 IVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++..+.+... ..+.|.....++.++|+
T Consensus       245 ia~iln~~Ka-PYNiS~~~s~~AL~Als  271 (375)
T KOG0633|consen  245 IAEILNRAKA-PYNISVAGSVAALAALS  271 (375)
T ss_pred             HHHHHHhccC-CccccchhHHHHHHhcC
Confidence            5555655555 23455555555555554

>PLN02242 methionine gamma-lyase

Probab=99.90  E-value=2.1e-22  Score=186.33  Aligned_cols=187  Identities=18%  Similarity=0.188  Sum_probs=145.5

Q ss_pred             CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH-----HHcCcEEE
Q 021547           86 MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA-----KRNHIEVR  160 (311)
Q Consensus        86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~-----~~~g~~~~  160 (311)
                      .+...+|++.+++++        ..+.+++++|+++|+..++.+++++| |+|+++.|.|..+...+     +..|.+++
T Consensus        75 ~Pt~~~LE~~lA~l~--------g~~~~l~~~sG~~Ai~~al~al~~~G-D~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~  145 (418)
T PLN02242         75 NPTVLNLGRQMAALE--------GTEAAYCTASGMSAISSVLLQLCSSG-GHVVASNTLYGGTHALLAHFLPRKCNITTT  145 (418)
T ss_pred             ChhHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCC-CEEEEcCCcHHHHHHHHHHhhhhccCceEE
Confidence            456788999999988        34578899999999999999999999 99999999998876654     34677777


Q ss_pred             EeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcc
Q 021547          161 HFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM  239 (311)
Q Consensus       161 ~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~  239 (311)
                      .++.       .|++.+++++++ ++++|++++|+||||.+.+   +++|+++|+++|++||+|++|..+.+..   .  
T Consensus       146 ~~d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~---~--  210 (418)
T PLN02242        146 FVDI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSP---A--  210 (418)
T ss_pred             EcCC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCH---H--
Confidence            6654       288999999988 5999999999999999987   9999999999999999999998655421   1  


Q ss_pred             cccCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhhhc---cccCCCchhHHHHHhhh
Q 021547          240 GVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       240 ~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l  308 (311)
                       .+   +..|+++|+||.++++|.++ ||++++.        ++++.++....   ...+++...|.+...++
T Consensus       211 -~~---g~divv~S~SK~l~g~g~~~gG~iv~~~--------~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~  271 (418)
T PLN02242        211 -RL---GADVVVHSISKFISGGADIIAGAVCGPA--------ELVNSMMDLHHGALMLLGPTMNPKVAFELSE  271 (418)
T ss_pred             -Hc---CCcEEEEeCccccCCCCCceEEEEEcCH--------HHHHHHHHHhhhhhhccCCCCCHHHHHHHHc
Confidence             11   24599999999999999885 8887643        36666665522   12344555566655443

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.90  E-value=2.6e-22  Score=184.56  Aligned_cols=243  Identities=16%  Similarity=0.149  Sum_probs=167.1

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ++.++|||..|.+..+.+ ..+|.+.+++.+.+....  ...|. .    +.++.+++.+.+.+|    .+++++++|++
T Consensus        25 ~g~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~-~----~~~~~l~~~la~~~g----~~~~~~~~sg~   94 (379)
T TIGR00707        25 NGKEYLDFVAGIAVNSLG-HAHPKLVEALKEQLEKLVHVSNLYY-T----EPQEELAEKLVEHSG----ADRVFFCNSGA   94 (379)
T ss_pred             CCCEEEEcCcchhhccCC-CCCHHHHHHHHHHHhhccccccccC-C----HHHHHHHHHHHhhCC----CCEEEEeCCcH
Confidence            578899999873322222 356899999998886432  11232 2    334444444444443    24899999999


Q ss_pred             HHHHHHHHHHh---c----CCCCEEEecCCCCcchHHHHHHcCcEEEE----eeccCCCCcc--cCHHHHHhhcCCCccE
Q 021547          121 EAVEIILTVIT---R----LGAANILLPRPGWPFYESFAKRNHIEVRH----FDLLPERGWE--VDLEAVEALADENTAA  187 (311)
Q Consensus       121 ~a~~~~~~~l~---~----~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~----~~~~~~~~~~--~d~~~l~~~l~~~~~~  187 (311)
                      +++..+++.+.   .    ++ |+|+++.|+|..+...+...+.....    .++..+..+.  .|++.+++.+++++++
T Consensus        95 ~a~~~a~~~~~~~~~~~~~~~-~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~  173 (379)
T TIGR00707        95 EANEAALKLARKYTGDKGKEK-KKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAA  173 (379)
T ss_pred             HHHHHHHHHHHHHhhccCCCC-CeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeE
Confidence            99999888663   2    36 99999999998877666555543221    1211111111  1789999988888889


Q ss_pred             EEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceee
Q 021547          188 IVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG  266 (311)
Q Consensus       188 i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G  266 (311)
                      ++++.++||+|.. ++.+++++|.++|+++|+++|+||+|.++.+.+.. .++.......+++   ++||.++ +|+|+|
T Consensus       174 v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~~~~~~~~~d~~---t~sK~~~-~G~riG  248 (379)
T TIGR00707       174 VIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF-FAYEHYGIEPDII---TLAKGLG-GGVPIG  248 (379)
T ss_pred             EEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh-hhHHhcCCCCCEE---EEccccc-CCcccE
Confidence            8887667778864 68999999999999999999999999987665532 2222222223333   7899998 999999


Q ss_pred             EEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          267 WLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       267 ~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |++++.        ++++.+... .....+.++++|+++.+.|+
T Consensus       249 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~  284 (379)
T TIGR00707       249 ATLAKE--------EVAEAFTPGDHGSTFGGNPLACAAALAVLE  284 (379)
T ss_pred             EEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence            999853        377777654 33456789999999987764

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.90  E-value=1e-21  Score=179.95  Aligned_cols=201  Identities=15%  Similarity=0.126  Sum_probs=150.4

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCC-------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCC
Q 021547           62 RTAAVAEDAIVDSVRSSMFNCYAP-------MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLG  134 (311)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~-------~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g  134 (311)
                      .+...+.+++.+...+....++..       ..-+.++++.++++++        .+.+++++|+++++..++.+++++|
T Consensus        19 ~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g--------~~~~~i~~g~~~a~~~~~~~l~~~g   90 (370)
T TIGR02539        19 VLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLG--------MDEARVTHGAREGKFAVMHALCKEG   90 (370)
T ss_pred             CCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhC--------CCceEEECChHHHHHHHHHHhhCCC
Confidence            456677777776643211111111       1134677888888883        3467889999999999999999999


Q ss_pred             CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-------CccEEEEeCCCCCCccCCCHHHHH
Q 021547          135 AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-------NTAAIVIINPCNPCGNVLTYQHLQ  207 (311)
Q Consensus       135 ~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~i~i~~p~nptG~~~~~~~l~  207 (311)
                       |.|+++.+.|.+....++..|.+++.++...+.++.+|+++|++.+++       +++++++++|+||+|...+   ++
T Consensus        91 -d~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~  166 (370)
T TIGR02539        91 -DWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AG  166 (370)
T ss_pred             -CEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HH
Confidence             999999888766667889999999999875445678999999998752       6789999999999999888   88


Q ss_pred             HHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHh
Q 021547          208 KIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIK  287 (311)
Q Consensus       208 ~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~  287 (311)
                      +|.++|+++|+++|+|++|+....    .......   +..++++|+||+|+ +|.|+||++++.        ++++.++
T Consensus       167 ~i~~la~~~~~~livDea~~~g~~----~~~~~~~---~~di~v~s~sK~~~-~~g~~G~l~~~~--------~~i~~l~  230 (370)
T TIGR02539       167 KVAKVCREKGVPLLLNCAYTVGRM----PVSAKEI---GADFIVGSGHKSMA-ASGPCGVLGMSE--------EWEDIVL  230 (370)
T ss_pred             HHHHHHHHcCCeEEEECccccCCc----CCCHHHc---CCCEEEeeCccccc-CCCCEEEEEECH--------HHHhhhc
Confidence            999999999999999999996321    1111111   23477899999987 577899999853        3666666


Q ss_pred             hhh
Q 021547          288 ACL  290 (311)
Q Consensus       288 ~~~  290 (311)
                      ...
T Consensus       231 ~~~  233 (370)
T TIGR02539       231 RKS  233 (370)
T ss_pred             ccc
Confidence            543

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.90  E-value=6.5e-22  Score=183.77  Aligned_cols=233  Identities=16%  Similarity=0.163  Sum_probs=161.7

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF------NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      +++.++|+..+   |..+..+|.+++++.+.+.....      ..|.......+|++.+++++.       .++.+++++
T Consensus        45 ~~~~~~~~sn~---yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g-------~~~~i~~~s  114 (410)
T PRK13392         45 PRRVTIWCSND---YLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG-------KESALLFTS  114 (410)
T ss_pred             CceEEEEECCC---ccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC-------CCCEEEECc
Confidence            46689999987   34678899999999988764221      123332246788888888883       234566666


Q ss_pred             ChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc----CCCccEEEEe
Q 021547          118 GCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA----DENTAAIVII  191 (311)
Q Consensus       118 g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l----~~~~~~i~i~  191 (311)
                      | ++++..++..+..  +| +.|+++...|..+...++..|.++..++.   +    |.+.+++.+    .+++++++++
T Consensus       115 G-~~a~~~~i~~l~~~~~g-~~vi~~~~~h~s~~~~~~~~g~~~~~~~~---~----d~~~l~~~l~~~~~~~t~~v~i~  185 (410)
T PRK13392        115 G-YVSNDAALSTLGKLLPG-CVILSDALNHASMIEGIRRSGAEKQVFRH---N----DLADLEEQLASVDPDRPKLIAFE  185 (410)
T ss_pred             H-HHHHHHHHHHHhcCCCC-CEEEEehhhhHHHHHHHHHcCCeEEEEeC---C----CHHHHHHHHHhccCCCCEEEEEe
Confidence            5 6778777877754  78 98888888888877788888988776642   1    333444433    3578899999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEe
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      +|+||||.+++   +++|.++|+++|+++|+||+|....++............ +...++++|+||.|+++|   ||+++
T Consensus       186 ~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~  259 (410)
T PRK13392        186 SVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAA  259 (410)
T ss_pred             CCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhc
Confidence            99999999998   999999999999999999999944443211111111111 112388999999999998   99876


Q ss_pred             eCCCCccchhhHHHHHhhhhc---cccCCCchhHHHHHhhhh
Q 021547          271 NDPNGVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l~  309 (311)
                      +.        ++++.++.+..   ++...++++|+++.+.|+
T Consensus       260 ~~--------~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~  293 (410)
T PRK13392        260 SA--------DLIDFVRSFAPGFIFTTALPPAVAAGATAAIR  293 (410)
T ss_pred             CH--------HHHHHHHHhCcchhccCcCCHHHHHHHHHHHH
Confidence            42        36776665532   234456677887777664

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.89  E-value=1.2e-21  Score=180.28  Aligned_cols=186  Identities=18%  Similarity=0.195  Sum_probs=142.5

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~  162 (311)
                      +...++++.+++++        ..+++++++|+++|+..++.+++++| |+|+++.+.|.+..    ..++..|++++.+
T Consensus        61 p~~~~le~~la~l~--------g~~~~v~~ssG~~Ai~~al~al~~~G-d~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~v  131 (390)
T PRK08133         61 PTVTMFQERLAALE--------GAEACVATASGMAAILAVVMALLQAG-DHVVSSRSLFGSTVSLFEKIFARFGIETTFV  131 (390)
T ss_pred             hHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCC-CEEEEccCcchhHHHHHHHHHHHcCcEEEEE
Confidence            34678889999888        33578999999999999999999999 99999999987643    3566789999988


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      +..       |++.+++.+++++++|++++|+||+|.+.+   +++|+++|+++|+++|+|++|....+.    .++. +
T Consensus       132 d~~-------d~~~l~~~i~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~----~pl~-~  196 (390)
T PRK08133        132 DLT-------DLDAWRAAVRPNTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ----QPLK-L  196 (390)
T ss_pred             CCC-------CHHHHHHhcCcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC----Cchh-h
Confidence            752       789999999999999999999999999998   899999999999999999999754321    1121 1


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHh
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMF  306 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~  306 (311)
                         +..+++.|+||.++.+|.++|++++.++       ++++++... .......+++.++.+.+
T Consensus       197 ---g~Divv~S~sK~~~g~g~~~GG~vv~~~-------~~~~~~~~~~~~~g~~~~~~~a~~~l~  251 (390)
T PRK08133        197 ---GADVVIHSATKYLDGQGRVLGGAVVGSK-------ELMEEVFGFLRTAGPTLSPFNAWVFLK  251 (390)
T ss_pred             ---CCcEEEeecceeecCCcceEeEEEEcCH-------HHHHHHHHHHHHhCCCCCHHHHHHHHc
Confidence               1238899999999999999965554433       245555544 22334455555555433

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.89  E-value=8.3e-22  Score=181.88  Aligned_cols=247  Identities=17%  Similarity=0.137  Sum_probs=169.2

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.++||..|.-..+.+. .+|.+.+++.+++.....  ... ....+....+++.+.+..    ..+++++++|+++
T Consensus        28 ~dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~~~~sGse   99 (389)
T PRK01278         28 EDGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWH--VSN-LYRIPEQERLAERLVENS----FADKVFFTNSGAE   99 (389)
T ss_pred             CCCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCc--ccc-ccCChHHHHHHHHHHhhC----CCCEEEEcCCcHH
Confidence            35888999988632222334 688999999999864211  111 112233444555554422    2468999999999


Q ss_pred             HHHHHHHHHh----cCC---CCEEEecCCCCcchHHHHHHcCcEEEEeec-cC-CCCcc----cCHHHHHhhcCCCccEE
Q 021547          122 AVEIILTVIT----RLG---AANILLPRPGWPFYESFAKRNHIEVRHFDL-LP-ERGWE----VDLEAVEALADENTAAI  188 (311)
Q Consensus       122 a~~~~~~~l~----~~g---~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~-~~~~~----~d~~~l~~~l~~~~~~i  188 (311)
                      |++.+++++.    .+|   .++|++.++.|+++...+...+......+. .+ ..++.    .|++.+++.++++++++
T Consensus       100 A~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~av  179 (389)
T PRK01278        100 AVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAI  179 (389)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEE
Confidence            9999988873    455   138999999999886655554433222110 00 11111    48899999998888899


Q ss_pred             EEeCCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeE
Q 021547          189 VIINPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW  267 (311)
Q Consensus       189 ~i~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~  267 (311)
                      ++..++||+| ..++.+.+++|.++|++||+++|+||+|.++.+.|..+ ....+.-.++   +.++||.++ +|+|+||
T Consensus       180 ivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~-~G~~ig~  254 (389)
T PRK01278        180 LIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF-AHEWAGVTPD---IMAVAKGIG-GGFPLGA  254 (389)
T ss_pred             EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce-eecccCCCCC---EEEEehhcc-CCcceEE
Confidence            9888788998 78899999999999999999999999999876665422 2222222222   348999986 8999999


Q ss_pred             EEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          268 LATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       268 i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +++++        ++++.+... ...+++.++++|+++.+.|+
T Consensus       255 ~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~  289 (389)
T PRK01278        255 CLATE--------EAAKGMTPGTHGSTYGGNPLAMAVGNAVLD  289 (389)
T ss_pred             EEEcH--------HHHhccCCCCCCCCCCccHHHHHHHHHHHH
Confidence            99864        356666544 33456789999999866654

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.89  E-value=1.7e-21  Score=177.08  Aligned_cols=229  Identities=14%  Similarity=0.131  Sum_probs=159.0

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCC----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF--NCYAP----MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~----~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      .+++|+..+   |.+.+.+|++.+++++.+.....  ..|..    .....++++.+++++    |.    ++.++++++
T Consensus         2 ~~~~~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~----~~~iv~~sg   70 (349)
T cd06454           2 KVLNFCSND---YLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFH----GK----EAALVFSSG   70 (349)
T ss_pred             CceecccCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHh----CC----CCEEEeccH
Confidence            578898887   34677789999999999874221  11222    223356666666665    31    245666666


Q ss_pred             HHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-----CccEEEEeCCC
Q 021547          120 MEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-----NTAAIVIINPC  194 (311)
Q Consensus       120 ~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~i~i~~p~  194 (311)
                      ++++.+++.+++++| |+|+++.|.|.++...++..|.+++.++.       +|.+++++.+++     +++++++++++
T Consensus        71 ~~a~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~  142 (349)
T cd06454          71 YAANDGVLSTLAGKG-DLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVY  142 (349)
T ss_pred             HHHHHHHHHHhcCCC-CEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEeccc
Confidence            788888888999999 99999999999988888999999887752       366777777653     46777888999


Q ss_pred             CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      ||||...+   +++|.++|+++|+++|+|++|+...+.  +... ........+++++++|+||.++.+|   ||++.++
T Consensus       143 ~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~  215 (349)
T cd06454         143 SMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGV-EEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSK  215 (349)
T ss_pred             cCCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCCCCCh-hhhccccccCcEEEeechhhhcccC---CEEECCH
Confidence            99999987   899999999999999999999743222  1111 1111123456799999999988766   9988643


Q ss_pred             CCCccchhhHHHHHhhhhc---cccCCCchhHHHHHhhh
Q 021547          273 PNGVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l  308 (311)
                              ++++.++....   .+...++..++++.+.|
T Consensus       216 --------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l  246 (349)
T cd06454         216 --------ELIDYLRSYARGFIFSTSLPPAVAAAALAAL  246 (349)
T ss_pred             --------HHHHHHHHhchhhhccCCCCHHHHHHHHHHH
Confidence                    35555544321   12345555555555544

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.89  E-value=3.1e-21  Score=178.92  Aligned_cols=204  Identities=20%  Similarity=0.248  Sum_probs=157.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC----CC----CCCCcHHHHHHHHHHHhhcCCCCCC-CCCE
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC----YA----PMFGLPLARRAVAEYLNRDLPYKLS-ADDI  113 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~----Y~----~~~g~~~lr~~ia~~l~~~~g~~~~-~~~v  113 (311)
                      .+.+++.|+++..     .++++.+.+++.+.+.......    +.    ....+.++|+.++++++.      + +++|
T Consensus        15 ~~~~~~yld~~~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~------~~~~~v   83 (403)
T TIGR01979        15 NGKPLVYLDSAAT-----SQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINA------ASDEEI   83 (403)
T ss_pred             CCCceEEEeCccc-----cCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCc------CCCCeE
Confidence            3668899999983     2567888899887765321100    10    012456888999998843      4 5789


Q ss_pred             EEeCChHHHHHHHHHHH----hcCCCCEEEecCCCCcch----HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCc
Q 021547          114 YITLGCMEAVEIILTVI----TRLGAANILLPRPGWPFY----ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENT  185 (311)
Q Consensus       114 ~~t~g~~~a~~~~~~~l----~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~  185 (311)
                      ++|+|+++++.+++.++    .++| |+|+++.+.|++.    ...++..|.+++.++..  .++.++++.+++.+++++
T Consensus        84 ~~~~g~t~~l~~~~~~~~~~~~~~g-~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~  160 (403)
T TIGR01979        84 VFTRGTTESINLVAYSWGDSNLKAG-DEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTEKT  160 (403)
T ss_pred             EEeCCHHHHHHHHHHHhhhhcCCCC-CEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhccCC
Confidence            99999999999998876    4689 9999999988753    45667889999999865  446789999999999999


Q ss_pred             cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCccee
Q 021547          186 AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF  265 (311)
Q Consensus       186 ~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~  265 (311)
                      +++++++++||||..++   +++|.++|+++|+++|+|++|+...    .+..+..   .+..+++.|++|.+|.+|  +
T Consensus       161 ~lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~----~~~~~~~---~~~d~~~~s~~K~~gp~G--~  228 (403)
T TIGR01979       161 KLVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPH----MPVDVQA---LDCDFYVFSGHKMYGPTG--I  228 (403)
T ss_pred             eEEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCc----cccCccc---cCCCEEEEecccccCCCC--c
Confidence            99999999999999999   8899999999999999999997522    2222222   234589999999887666  8


Q ss_pred             eEEEeeC
Q 021547          266 GWLATND  272 (311)
Q Consensus       266 G~i~~~~  272 (311)
                      |+++++.
T Consensus       229 g~l~~~~  235 (403)
T TIGR01979       229 GVLYGKE  235 (403)
T ss_pred             eEEEEch
Confidence            8888753

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.89  E-value=4.1e-22  Score=184.43  Aligned_cols=240  Identities=18%  Similarity=0.126  Sum_probs=168.1

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ++++++||..|.+....+ +.+|.+.+++.++++...  ...|..+.+ .    .+++++.+.++.. ..+++++++|++
T Consensus        41 dg~~~lD~~s~~~~~~lG-~~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~----~la~~l~~~~~~~-~~~~v~~~~sgs  113 (398)
T PRK03244         41 DGKEYLDLLGGIAVNALG-HAHPAVVEAVTRQLATLGHVSNLFATEPQ-I----ALAERLVELLGAP-EGGRVFFCNSGA  113 (398)
T ss_pred             CCCEEEECCcCHhhccCC-CCCHHHHHHHHHHHHhccCccCccCCHHH-H----HHHHHHHHhCCCC-CCCEEEEeCchH
Confidence            578899999874432212 247999999999887422  224554322 3    4444444444422 347899999999


Q ss_pred             HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHH-cCcE------------EEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547          121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKR-NHIE------------VRHFDLLPERGWEVDLEAVEALADENTAA  187 (311)
Q Consensus       121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  187 (311)
                      +++..+++.+..+|.+.|+...++|+++...+.. .+..            +..++.       .|++.+++.+.+++++
T Consensus       114 ea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~~a  186 (398)
T PRK03244        114 EANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDDDTAA  186 (398)
T ss_pred             HHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcCCeEE
Confidence            9999999987777656788888888876443332 2211            111211       3788999988778889


Q ss_pred             EEEeCCCCCCccCCCHHH-HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceee
Q 021547          188 IVIINPCNPCGNVLTYQH-LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG  266 (311)
Q Consensus       188 i~i~~p~nptG~~~~~~~-l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G  266 (311)
                      ++++.++||+|.++++++ +++|.++|++||+++|+||+|.++.+.|..+ .+......+++   .+|||.++ +|+|+|
T Consensus       187 viiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~pDi---~t~sK~l~-~G~~ig  261 (398)
T PRK03244        187 VFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-AHQHDGVTPDV---VTLAKGLG-GGLPIG  261 (398)
T ss_pred             EEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-hhhhhCCCCCE---EEEchhhh-CCcccE
Confidence            999888999999987665 9999999999999999999998876655422 22222222333   38899987 899999


Q ss_pred             EEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          267 WLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       267 ~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |++++.        ++++.+... ...+++.++++|+++.+.|+
T Consensus       262 ~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~  297 (398)
T PRK03244        262 ACLAFG--------PAADLLTPGLHGSTFGGNPVACAAALAVLD  297 (398)
T ss_pred             EEEEcH--------HHHhhccCCCCcCCCCCCHHHHHHHHHHHH
Confidence            999864        366666543 33467889999999998865

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.89  E-value=1.7e-21  Score=180.82  Aligned_cols=203  Identities=20%  Similarity=0.209  Sum_probs=155.7

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP--------MFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--------~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      .+++.|+.+.     ..+.++.+.+++.+.+.....+....        .....++|+.++++++.     .++++|++|
T Consensus        22 ~~~iYld~a~-----~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~t   91 (406)
T PRK09295         22 LPLAYLDSAA-----SAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA-----RSAEELVFV   91 (406)
T ss_pred             CceEEEeCcc-----cccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc-----CCCCeEEEe
Confidence            4689999987     24678889999988875321111110        11245788888888842     156799999


Q ss_pred             CChHHHHHHHHHHH----hcCCCCEEEecCCCCcc----hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEE
Q 021547          117 LGCMEAVEIILTVI----TRLGAANILLPRPGWPF----YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAI  188 (311)
Q Consensus       117 ~g~~~a~~~~~~~l----~~~g~d~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i  188 (311)
                      +|+++++..++.++    +++| |+|+++.+.|++    +...++..|++++.++..  .++.+|+++|++.++++++++
T Consensus        92 ~g~t~~l~~~~~~~~~~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv  168 (406)
T PRK09295         92 RGTTEGINLVANSWGNSNVRAG-DNIIISEMEHHANIVPWQMLCARVGAELRVIPLN--PDGTLQLETLPALFDERTRLL  168 (406)
T ss_pred             CCHHHHHHHHHHHhhhhcCCCc-CEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCCCHHHHHHhcCCCcEEE
Confidence            99999999998874    5789 999999988864    455677889999999874  345689999999999899999


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547          189 VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL  268 (311)
Q Consensus       189 ~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i  268 (311)
                      ++++|+||||.++|   +++|.++|+++|+++++|++|+...    ....+...   +..+++.|++|.+|.+|  +||+
T Consensus       169 ~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~---~~D~~~~s~~K~~gp~G--~G~l  236 (406)
T PRK09295        169 AITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMH----HPVDVQAL---DCDFYVFSGHKLYGPTG--IGIL  236 (406)
T ss_pred             EEecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCc----cccCchhc---CCCEEEeehhhccCCCC--cEEE
Confidence            99999999999999   8889999999999999999997532    22233322   23488999999877666  7998


Q ss_pred             EeeC
Q 021547          269 ATND  272 (311)
Q Consensus       269 ~~~~  272 (311)
                      +++.
T Consensus       237 ~~~~  240 (406)
T PRK09295        237 YVKE  240 (406)
T ss_pred             EEch
Confidence            8754

>PRK07179 hypothetical protein; Provisional

Probab=99.89  E-value=2.9e-21  Score=179.23  Aligned_cols=204  Identities=13%  Similarity=0.121  Sum_probs=154.7

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC---C--CCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS---M--FNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~---~--~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      .+..+++|+..+   |..+..+|.+++++.+++..-   .  ...+. ......+|++.+++++.        .+.++++
T Consensus        52 ~g~~~~~~~~~~---YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~  120 (407)
T PRK07179         52 PGPDAIILQSND---YLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTG--------FESCLLC  120 (407)
T ss_pred             CCCcEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhC--------CCcEEEE
Confidence            467889999988   457888999999999998631   1  11121 12245678888888872        3567889


Q ss_pred             CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCC
Q 021547          117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCN  195 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~n  195 (311)
                      +|+++|+..++.++..+| |.|++..+.|..+...++..|.+++.++.       .|++.+++.+++ +++++++.+++|
T Consensus       121 ~sG~~An~~~l~~l~~~g-~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n  192 (407)
T PRK07179        121 QSGWAANVGLLQTIADPN-TPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYS  192 (407)
T ss_pred             CCHHHHHHHHHHHhCCCC-CEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCC
Confidence            999999999999999999 99999999998888888888888766542       488999998865 477888889999


Q ss_pred             CCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC-CeEEEecCcccCCCCcceeeEEEee
Q 021547          196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV-PVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       196 ptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~-~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      |||.+.+   +++|.++|+++|+++|+||+|....++......+..++... ..+++.|+||.++   .|+||++++
T Consensus       193 ~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~  263 (407)
T PRK07179        193 TTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCP  263 (407)
T ss_pred             CCCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeC
Confidence            9999999   88999999999999999999985433211111122222112 2488999999975   368999875

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.89  E-value=2e-21  Score=178.08  Aligned_cols=194  Identities=19%  Similarity=0.205  Sum_probs=147.7

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHc
Q 021547           80 FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRN  155 (311)
Q Consensus        80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~  155 (311)
                      +.+|+. +...+|+++++++.+        .+++++++|+++++.+++.+++++| |+|+++.|+|..+...+    ...
T Consensus        45 Y~R~~~-p~~~~le~~lA~l~g--------~~~v~~~~gg~~Ai~~~l~all~~G-D~Vl~~~p~y~~~~~~~~~~~~~~  114 (382)
T TIGR02080        45 YSRSGN-PTRDLLQQALAELEG--------GAGAVVTNTGMSAIHLVTTALLGPD-DLLVAPHDCYGGTYRLLNALAKKG  114 (382)
T ss_pred             ccCCCC-chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCC-CEEEEcCCCcHHHHHHHHHHHhhc
Confidence            445544 457889999999883        4689999999999999999999999 99999999998644332    333


Q ss_pred             CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547          156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP  235 (311)
Q Consensus       156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~  235 (311)
                      +.++..++.       .|++.+++.++++++++++++|+||||.+++   +++|.++|+++|+++|+|++|......   
T Consensus       115 ~~~v~~~d~-------~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~---  181 (382)
T TIGR02080       115 CFRVLFVDQ-------GDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ---  181 (382)
T ss_pred             CeEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC---
Confidence            455554431       3789999999889999999999999999999   888999999999999999999864321   


Q ss_pred             CCcccccCCCCCeEEEecCcccCCC-CcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547          236 YIPMGVFGSIVPVITLGSISKRWIV-PGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       236 ~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  308 (311)
                       .++. +.   ..++++|+||.++. +|++.|++++.++       +++++++.... .+.+.+++.++.+.+-+
T Consensus       182 -~pl~-~g---aDivv~S~sK~l~G~~~~~~G~i~~~~~-------~~~~~l~~~~~~~g~~~sp~~a~l~lr~l  244 (382)
T TIGR02080       182 -NPLA-LG---ADLVLHSCTKYLNGHSDVIAGAVIAKDP-------QVAEELAWWANNLGVTGGAFDSYLTLRGL  244 (382)
T ss_pred             -Cchh-hC---CCEEEeecceeccCCCCceeEEEEeCCH-------HHHHHHHHHHHccCCCCCHHHHHHHHccc
Confidence             1221 11   23899999999864 6789999887654       36677766543 35677888777665443

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.89  E-value=3.9e-21  Score=177.13  Aligned_cols=205  Identities=18%  Similarity=0.113  Sum_probs=157.7

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-------CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-------NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      ....||++--.   . .-|+++++.+++.+.......       ..+.....+.++|+.++++++        .++++++
T Consensus        17 ~~~~~~~~~~~---~-~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g--------~~~~~~~   84 (387)
T PRK09331         17 EEEFINLDPIQ---R-GGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG--------MDEARVT   84 (387)
T ss_pred             cccccccChhh---c-CCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC--------CCcEEEe
Confidence            35667776332   1 246788999999988743111       111223357889999999983        3568899


Q ss_pred             CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-------CccEEE
Q 021547          117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-------NTAAIV  189 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~i~  189 (311)
                      +|+++++.+++.+++++| |+|+++.++|......++..|++++.++...+.++.+|++.+++.+++       ++++++
T Consensus        85 ~g~t~a~~~al~~l~~~g-d~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~  163 (387)
T PRK09331         85 HGAREGKFAVMHSLCKKG-DYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALAL  163 (387)
T ss_pred             CCHHHHHHHHHHHhcCCC-CEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEE
Confidence            999999999999999999 999999999988877889999999999873234677999999998753       688999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      +++|+|++|...+   +++|.++|+++|+++|+|++|+.-.    -+.....+   +..+++.|++|++++ +.|+||++
T Consensus       164 l~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~g~----~~~~~~~~---g~D~~~~s~~K~l~~-~~~~G~l~  232 (387)
T PRK09331        164 LTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTVGR----MPVDGKKL---GADFIVGSGHKSMAA-SAPSGVLA  232 (387)
T ss_pred             EECCCCCCccccc---HHHHHHHHHHcCCEEEEECCcccCC----cCCCHHHc---CCCEEEeeCcccccC-CCCEEEEE
Confidence            9999999999888   9999999999999999999998521    11122222   234889999999764 56999988


Q ss_pred             eeC
Q 021547          270 TND  272 (311)
Q Consensus       270 ~~~  272 (311)
                      ++.
T Consensus       233 ~~~  235 (387)
T PRK09331        233 TTE  235 (387)
T ss_pred             ECH
Confidence            753

>PRK10534 L-threonine aldolase; Provisional

Probab=99.89  E-value=2.9e-22  Score=181.15  Aligned_cols=228  Identities=15%  Similarity=0.109  Sum_probs=157.7

Q ss_pred             eeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHH
Q 021547           47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEII  126 (311)
Q Consensus        47 ~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~  126 (311)
                      +|+|+....     ..++|.+.+++.+...  ....|.+..+..+|+++++++++        .+.+++++|+++++.++
T Consensus         1 ~~~~~~~~~-----~~p~~~~~~a~~~~~~--~~~~Y~~~~~~~~L~~~la~~~g--------~~~~~v~~~g~~a~~~~   65 (333)
T PRK10534          1 MIDLRSDTV-----TRPSRAMLEAMMAAPV--GDDVYGDDPTVNALQDYAAELSG--------KEAALFLPTGTQANLVA   65 (333)
T ss_pred             CcccccccC-----CCCCHHHHHHHHhccC--CCcccCCCHHHHHHHHHHHHHhC--------CCeEEEeCchHHHHHHH
Confidence            467887752     2267888899876543  23478777789999999999983        34557888888888888


Q ss_pred             HHHHhcCCCCEEEecCCCCcc-hHHH-HHHcC-cEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCCC
Q 021547          127 LTVITRLGAANILLPRPGWPF-YESF-AKRNH-IEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNPC  197 (311)
Q Consensus       127 ~~~l~~~g~d~Vl~~~p~~~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~npt  197 (311)
                      +.+++.+| |+|+++.|.|.. |... ....+ .+++.++..  .++.+|+++|++.+++      +++++++++|+  +
T Consensus        66 l~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~  140 (333)
T PRK10534         66 LLSHCERG-EEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--N  140 (333)
T ss_pred             HHHhcCCC-CeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--C
Confidence            88889999 999999888853 3221 23333 566766653  4678999999998865      58899999766  5


Q ss_pred             ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc--CCCCCCcccccCCCCCeEEEecCcccCCCCcceee-EEEeeCCC
Q 021547          198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAF--GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG-WLATNDPN  274 (311)
Q Consensus       198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G-~i~~~~~~  274 (311)
                      |.+++.+++++|+++|++++++|++||+|.....  .+...   ..+....+.+ +.||||.|+++   +| |+++ ++ 
T Consensus       141 G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~---~~~~~~~~~~-~~s~SK~~~~~---~G~~~~~-~~-  211 (333)
T PRK10534        141 GKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCEL---KEITQYCDSF-TICLSKGLGTP---VGSLLVG-NR-  211 (333)
T ss_pred             CeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCH---HHHHhcCCEE-EEEeEcCCCCc---ccceEEc-CH-
Confidence            9999999999999999999999999999873211  12111   1111111222 34899998764   78 5655 33 


Q ss_pred             CccchhhHHHHHhhhhccc---cCCCchhHHHHHhhhh
Q 021547          275 GVLQKSGIVGSIKACLGVR---SGPSTLIQVCEMFLLV  309 (311)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~---~~~~~~~q~~~~~~l~  309 (311)
                            ++++.++.+....   ...+.++|+++...|+
T Consensus       212 ------~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  243 (333)
T PRK10534        212 ------DYIKRARRWRKMTGGGMRQAGILAAAGLYALK  243 (333)
T ss_pred             ------HHHHHHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence                  4777777665422   2233455666665554

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.89  E-value=3.7e-21  Score=177.40  Aligned_cols=188  Identities=19%  Similarity=0.197  Sum_probs=139.8

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~  162 (311)
                      +...+|++.++++++        .+..+++++|+.++..++.+++++| |+|+++.+.|..+...    +...|++++.+
T Consensus        65 p~~~~Le~~lA~l~G--------~~~~~~~~sG~~Ai~~~l~~~l~~G-d~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v  135 (398)
T PRK07504         65 PTVDMFEKRMCALEG--------AEDARATASGMAAVTAAILCQVKAG-DHVVAARALFGSCRYVVETLLPRYGIESTLV  135 (398)
T ss_pred             chHHHHHHHHHHHhC--------CCeeeEecCHHHHHHHHHHHHhCCC-CEEEEcCCchhHHHHHHHHHHhhcCeEEEEE
Confidence            457899999999883        2344567788899988888888999 9999999999875433    45678888877


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      +       .+|++.+++++++++++|++++|+||+|.+++   +++|.++|+++|+++|+|++|....+.    .++ .+
T Consensus       136 d-------~~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~----~~~-~~  200 (398)
T PRK07504        136 D-------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQ----KPL-EL  200 (398)
T ss_pred             C-------CCCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccC----Cch-hh
Confidence            4       26899999999999999999999999999999   899999999999999999999864331    111 11


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhh
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFL  307 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~  307 (311)
                         +..+++.|+||.++++|+++|++++.+.+      .+.+.++.. .......+++.++.+.+-
T Consensus       201 ---gaDivv~S~sK~l~g~g~~~GG~vv~~~~------~i~~~~~~~~~~~g~~~s~~~A~~~l~~  257 (398)
T PRK07504        201 ---GAHIVVYSATKHIDGQGRCLGGVVLSDKA------WIEEHLQDYFRHTGPSLSPFNAWTLLKG  257 (398)
T ss_pred             ---CCCEEEeeccccccCCccceEEEEEeCcH------HHHHHHHHHHHHhCCCCCHHHHHHHHhc
Confidence               23489999999999999999765554432      122334433 222334555555544443

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.88  E-value=3e-21  Score=177.08  Aligned_cols=195  Identities=21%  Similarity=0.236  Sum_probs=148.9

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHc
Q 021547           80 FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRN  155 (311)
Q Consensus        80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~  155 (311)
                      +.+|+. +....|+++++++.+        .+++++++|+++++..++.+++++| |+|+++.|.|.+....    ....
T Consensus        46 Y~R~~~-pt~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~~~G-D~Vl~~~~~y~~~~~~~~~~~~~~  115 (386)
T PRK08045         46 YSRRGN-PTRDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFLKPG-DLLVAPHDCYGGSYRLFDSLAKRG  115 (386)
T ss_pred             eeCCCC-ccHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCC-CEEEEcCCCcHHHHHHHHHHHhhC
Confidence            334544 467889999999883        2469999999999999999999999 9999999999863332    2233


Q ss_pred             CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547          156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP  235 (311)
Q Consensus       156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~  235 (311)
                      +.++..++       ..|.+.+++.++++++++++++|+||||.+++   +++|.++|+++|+++|+|++|.....    
T Consensus       116 gi~v~~vd-------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~----  181 (386)
T PRK08045        116 CYRVLFVD-------QGDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPAL----  181 (386)
T ss_pred             CeEEEEeC-------CCCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----
Confidence            44555543       24889999999889999999999999999999   88899999999999999999986432    


Q ss_pred             CCcccccCCCCCeEEEecCcccCCC-CcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          236 YIPMGVFGSIVPVITLGSISKRWIV-PGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       236 ~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ..++. +..   .++++|+||.++. ++.+.|++++.++       ++++++... ...+.+.+++.++.+.+.|+
T Consensus       182 ~~pl~-~ga---Divv~S~tK~l~G~~d~~~G~vi~~~~-------~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~  246 (386)
T PRK08045        182 QNPLA-LGA---DLVLHSCTKYLNGHSDVVAGVVIAKDP-------DVVTELAWWANNIGVTGGAFDSYLLLRGLR  246 (386)
T ss_pred             CCchh-hCC---CEEEeecceeccCCCCceeEEEEeCcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhc
Confidence            12222 111   2899999999874 5688999987554       366666544 33456789999998877765

>PLN02721 threonine aldolase

Probab=99.88  E-value=1.3e-21  Score=178.10  Aligned_cols=214  Identities=15%  Similarity=0.107  Sum_probs=150.2

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE  124 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~  124 (311)
                      ..+++|+.+.+.    . +++.+.+++.+.........|.+  ...++|++++++++.        +.+++++++++++.
T Consensus         5 ~~~~~~~~~~~~----~-~~~~~~~a~~~~~~~~~~~~~~~--~~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~   69 (353)
T PLN02721          5 SRVVDLRSDTVT----K-PTDAMRAAMANAEVDDDVLGYDP--TALRLEEEMAKIFGK--------EAALFVPSGTMGNL   69 (353)
T ss_pred             hhhhhhhccccc----C-CCHHHHHHHHhccCCCcccCCCH--HHHHHHHHHHHHhCC--------ceeEEecCccHHHH
Confidence            357899999864    2 46788888876411122223333  478999999999953        23566666676777


Q ss_pred             HHHHHHhc-CCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-------CCccEEEEeCC
Q 021547          125 IILTVITR-LGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-------ENTAAIVIINP  193 (311)
Q Consensus       125 ~~~~~l~~-~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~~~~i~i~~p  193 (311)
                      .++.++++ +| |+|++++|+|.....   .+...|.+++.++.+  .++.+|++.+++.++       +++++++++++
T Consensus        70 ~~l~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~  146 (353)
T PLN02721         70 ISVLVHCDVRG-SEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENT  146 (353)
T ss_pred             HHHHHHccCCC-CeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEecc
Confidence            78887777 89 999999999865443   577889999988753  446789999999887       57889999875


Q ss_pred             -CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc--CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          194 -CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF--GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       194 -~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                       +||+|..++.+++++|.++|+++|+++|+|++|....+  .+...   ..+... ...++.|+||+|++   ++||+++
T Consensus       147 ~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~---~~~~~~-~d~~~~s~sK~l~~---~~G~~~~  219 (353)
T PLN02721        147 HANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPV---HRLVKA-ADSVSVCLSKGLGA---PVGSVIV  219 (353)
T ss_pred             ccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCH---HHHhhh-CCEEEEecccccCC---ceeeEEe
Confidence             78999999999999999999999999999999863211  12111   111111 12445589999764   3677544


Q ss_pred             eCCCCccchhhHHHHHhhhh
Q 021547          271 NDPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~  290 (311)
                      .++       ++++.+....
T Consensus       220 ~~~-------~~~~~~~~~~  232 (353)
T PLN02721        220 GSK-------SFIRKAKRLR  232 (353)
T ss_pred             cCH-------HHHHhHHHHH
Confidence            443       3666655543

>PRK02948 cysteine desulfurase; Provisional

Probab=99.88  E-value=3.6e-21  Score=177.13  Aligned_cols=232  Identities=13%  Similarity=0.017  Sum_probs=161.9

Q ss_pred             eecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--C------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA--P------MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~--~------~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      +.|+.+..     .+.++.+.+++.+.+..... ++.  .      ..-+.++|+.++++++      .++++|++|+|+
T Consensus         2 ~yld~a~~-----~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~i~~~~g~   69 (381)
T PRK02948          2 IYLDYAAT-----TPMSKEALQTYQKAASQYFG-NESSLHDIGGTASSLLQVCRKTFAEMIG------GEEQGIYFTSGG   69 (381)
T ss_pred             EeccCCCC-----CCCCHHHHHHHHHHHHhcCC-CCccccHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCcH
Confidence            56777762     35678899999887753211 111  0      0123466677777773      467899999999


Q ss_pred             HHHHHHHHHHHh----cCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC
Q 021547          120 MEAVEIILTVIT----RLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN  192 (311)
Q Consensus       120 ~~a~~~~~~~l~----~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~  192 (311)
                      ++++..++.+++    ++| +.|++....|+.+.   ..++..|.+++.++++  .++.+|++++++.++++++++++++
T Consensus        70 t~a~~~~~~~~~~~~~~~g-~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~~~~  146 (381)
T PRK02948         70 TESNYLAIQSLLNALPQNK-KHIITTPMEHASIHSYFQSLESQGYTVTEIPVD--KSGLIRLVDLERAITPDTVLASIQH  146 (381)
T ss_pred             HHHHHHHHHHHHHhccCCC-CEEEECCcccHHHHHHHHHHHhCCCEEEEEeeC--CCCCCCHHHHHHhcCCCCEEEEEEC
Confidence            999999888886    468 99999987776543   4567789999999864  3457899999999988899999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      |+||||.+++   +++|.++|+++|+++|+|+++...    .....+..   .+..+++.|+||.+|.+|  +|+++++.
T Consensus       147 ~~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~~g----~~~~~~~~---~~~d~~~~s~~K~~gp~G--~G~l~~~~  214 (381)
T PRK02948        147 ANSEIGTIQP---IAEIGALLKKYNVLFHSDCVQTFG----KLPIDVFE---MGIDSLSVSAHKIYGPKG--VGAVYINP  214 (381)
T ss_pred             CcCCcEeehh---HHHHHHHHHHcCCEEEEEChhhcc----ccccCccc---CCCCEEEecHHhcCCCCc--EEEEEEcC
Confidence            9999999998   888999999999999999876541    11122222   234588999999998888  78887754


Q ss_pred             CCCccchhhHH-HHHhhhhccccCCCchhHHHHHhhhh
Q 021547          273 PNGVLQKSGIV-GSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       273 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .. .+..  .. ..........++++.+++.++...++
T Consensus       215 ~~-~~~~--~~~~~~~~~~~~~~t~~~~~~~a~~~al~  249 (381)
T PRK02948        215 QV-RWKP--VFPGTTHEKGFRPGTVNVPGIAAFLTAAE  249 (381)
T ss_pred             CC-CCCC--cccCCCCCCCcCCCCccHHHHHHHHHHHH
Confidence            31 1110  00 00000001235677777777777664

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.88  E-value=4.5e-21  Score=176.91  Aligned_cols=188  Identities=21%  Similarity=0.251  Sum_probs=142.8

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcc----hHHHHHHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPF----YESFAKRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~----~~~~~~~~g~~~~~~~  163 (311)
                      ....|++.++++.+       ..+ .+++++|++++.+++.+++++| |+|+++.|.|.+    +...++..|.+++.++
T Consensus        61 ~~~~Le~~lA~l~g-------~~~-~v~~~sG~~Ai~~~l~all~pG-D~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~  131 (405)
T PRK08776         61 TRDLLGEALAELEG-------GAG-GVITATGMGAINLVLNALLQPG-DTLVVPHDAYGGSWRLFNALAKKGHFALITAD  131 (405)
T ss_pred             HHHHHHHHHHHHhC-------CCc-eEEEcCHHHHHHHHHHHHhCCC-CEEEEccCCchHHHHHHHHHHHhcCcEEEEEC
Confidence            35677777777663       123 4556666899999999999999 999999999987    4455666788888776


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      .       .|.+.+++.++++++++++++|+||||.+.+   +++|+++|+++|+++|+|++|....    .+.++. +.
T Consensus       132 ~-------~d~~~l~~~i~~~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~----~~~pl~-~g  196 (405)
T PRK08776        132 L-------TDPRSLADALAQSPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPA----LQKPLE-FG  196 (405)
T ss_pred             C-------CCHHHHHHhcCcCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCcccc----cCCccc-cc
Confidence            4       3789999998889999999999999999977   9999999999999999999998522    122322 22


Q ss_pred             CCCCeEEEecCcccCCCC-cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          244 SIVPVITLGSISKRWIVP-GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                         ..+++.|++|.++.+ ++..|++++.++       ++.+++..... ...+.+++.++++.+.++
T Consensus       197 ---aDivv~S~tK~l~g~~~~~~G~vv~~~~-------~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~  254 (405)
T PRK08776        197 ---ADLVLHSTTKYINGHSDVVGGAVVARDA-------ELHQQLVWWANALGLTGSPFDAFLTLRGLR  254 (405)
T ss_pred             ---CCEEEecCceeecCCCCceEEEEEeCCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhC
Confidence               228999999999877 478899887654       36666654432 344678888888776554

>PLN02483 serine palmitoyltransferase

Probab=99.88  E-value=5.9e-21  Score=180.25  Aligned_cols=213  Identities=17%  Similarity=0.147  Sum_probs=152.1

Q ss_pred             CCCeeecCCCCCCCCCCCC-----CcHHHHHHHHHHHhc--CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           44 PRPVIPLGHGDPAAFPCFR-----TAAVAEDAIVDSVRS--SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~-----~~~~~~~a~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      .++++||+..+.   .++.     +.+.+.+++.+.-.+  ..-..|+...+..++++++|++++       .++.++++
T Consensus        99 ~~~~~n~~s~~Y---Lgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~~  168 (489)
T PLN02483         99 TRRCLNLGSYNY---LGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVFG  168 (489)
T ss_pred             CceEEEeecCCc---cCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEEC
Confidence            577899999884   3443     234555555443211  112237777788999999999995       24456666


Q ss_pred             CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-------CC-----
Q 021547          117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-------EN-----  184 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~-----  184 (311)
                      +| ..+...++.+++++| |.|+++.|+|..+...++..|++++.++..       |.+++++.++       ++     
T Consensus       169 ~G-~~an~~~i~al~~~G-d~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~  239 (489)
T PLN02483        169 MG-YATNSTIIPALIGKG-GLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPW  239 (489)
T ss_pred             CH-HHHHHHHHHHhCCCC-CEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCC
Confidence            65 556667888899999 999999999999999999999999998753       4455544332       22     


Q ss_pred             ccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCC
Q 021547          185 TAAIVIINP-CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVP  261 (311)
Q Consensus       185 ~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~  261 (311)
                      .++++++.+ .|++|...+   +++|+++|++||++||+||+|+...++  |.........+..+.+|+++||||+|+++
T Consensus       240 ~k~livve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~  316 (489)
T PLN02483        240 KKIIVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSC  316 (489)
T ss_pred             ceEEEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccC
Confidence            255655554 689999988   999999999999999999999843332  22222222333345679999999999988


Q ss_pred             cceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547          262 GWRFGWLATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       262 G~r~G~i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      |   ||++++.        ++++.++..
T Consensus       317 G---G~i~~~~--------~li~~l~~~  333 (489)
T PLN02483        317 G---GYIAGSK--------ELIQYLKRT  333 (489)
T ss_pred             c---eEEEcCH--------HHHHHHHHh
Confidence            8   9998643        477887765

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.88  E-value=3.9e-21  Score=177.08  Aligned_cols=189  Identities=15%  Similarity=0.160  Sum_probs=145.8

Q ss_pred             CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCcEEEE
Q 021547           86 MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNHIEVRH  161 (311)
Q Consensus        86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~  161 (311)
                      .+...++++.++++++        .+..++++++++|+..++.+++++| |+|+++.|.|.+..    ..+...|++++.
T Consensus        63 ~p~~~~le~~lA~l~g--------~~~~i~~ssG~~Ai~~~l~all~~G-D~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~  133 (398)
T PRK08249         63 NPTVQAFEEKVRILEG--------AEAATAFSTGMAAISNTLYTFLKPG-DRVVSIKDTYGGTNKIFTEFLPRMGVDVTL  133 (398)
T ss_pred             ChHHHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCC-CEEEEcCCchHHHHHHHHHHHhhCCeEEEE
Confidence            3467889999999883        3457777888999999999999999 99999999998754    345677888877


Q ss_pred             eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547          162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV  241 (311)
Q Consensus       162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~  241 (311)
                      ++.       .|++.+++++++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|+..... .   ++. 
T Consensus       134 vd~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~-~---~l~-  198 (398)
T PRK08249        134 CET-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ-N---PLA-  198 (398)
T ss_pred             cCC-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC-C---chh-
Confidence            653       4889999999999999999999999999999   888999999999999999999964322 1   221 


Q ss_pred             cCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547          242 FGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       242 ~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  308 (311)
                      +.   ..++++|+||.++.+|.++|++++.++       +++++++.... .....+++.++.+.+-+
T Consensus       199 ~~---~Divv~S~sK~l~g~~~~~gG~vv~~~-------~l~~~l~~~~~~~g~~~s~~~a~l~l~~l  256 (398)
T PRK08249        199 LG---ADLVIHSATKFLSGHADALGGVVCGSK-------ELMEQVYHYREINGATMDPMSAYLILRGM  256 (398)
T ss_pred             hC---CCEEeccCceecCCCCCceEEEEECCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhCc
Confidence            11   228889999999988888755454432       36777766543 34566777777665544

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.88  E-value=5.4e-21  Score=176.61  Aligned_cols=188  Identities=19%  Similarity=0.189  Sum_probs=144.5

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~  162 (311)
                      +...+|++.++++++        .+..+++++++.++.+++.+++++| |+|+++.|.|...    ...++..|++++.+
T Consensus        65 p~~~~le~~lA~l~g--------~~~~i~~~sG~~Al~~~l~~ll~~G-d~Viv~~~~y~~t~~~~~~~~~~~G~~v~~v  135 (403)
T PRK07503         65 PTLALLEQRMASLEG--------GEAAVALASGMGAITATLWTLLRPG-DEVIVDQTLYGCTFAFLHHGLGEFGVTVRHV  135 (403)
T ss_pred             chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCC-CEEEEccCccchHHHHHHHHHhhCCEEEEEe
Confidence            457889999999884        2345677788899999999999999 9999999998653    34456789998888


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      +..       |++.+++.+++++++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|+.... +.   ++. +
T Consensus       136 d~~-------d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~-~~---~l~-~  200 (403)
T PRK07503        136 DLT-------DPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYL-QR---PLE-L  200 (403)
T ss_pred             CCC-------CHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc-CC---chh-h
Confidence            752       789999999889999999999999999998   89999999999999999999986432 22   221 1


Q ss_pred             CCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh--hc-cccCCCchhHHHHHhhhh
Q 021547          243 GSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC--LG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~q~~~~~~l~  309 (311)
                         +..++++|+||.++.+| .+.|+++. ++       +++++++..  .. .+...+++.++.+.+-|+
T Consensus       201 ---g~Di~v~S~tK~l~g~gd~~gG~v~~-~~-------~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~  260 (403)
T PRK07503        201 ---GADLVVHSATKYLGGHGDITAGLVVG-GK-------ALADRIRLEGLKDMTGAVMSPFDAFLLMRGLK  260 (403)
T ss_pred             ---CCCEEEccccccccCCCceeEEEEEc-CH-------HHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcc
Confidence               22399999999999876 67788774 33       366766532  22 345677777776665543

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.88  E-value=7.6e-21  Score=175.90  Aligned_cols=200  Identities=18%  Similarity=0.171  Sum_probs=152.0

Q ss_pred             eeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCC----cHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF---NCYAPMFG----LPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        47 ~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~---~~Y~~~~g----~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      ++.|+++.+     .++++.+++++.+.+.....   ..|....+    ..++|+.++++++      ...++|++++|+
T Consensus        18 ~~yl~~~~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~------~~~~~v~~~~~~   86 (397)
T TIGR01976        18 RVFFDNPAG-----TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLN------ADPPEVVFGANA   86 (397)
T ss_pred             eEEecCCcc-----CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcC------CCCCeEEEeCCH
Confidence            689998874     35678899999888753221   13443333    3577777777773      345579999999


Q ss_pred             HHHHHHHHHHH---hcCCCCEEEecCCCCcch----HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC
Q 021547          120 MEAVEIILTVI---TRLGAANILLPRPGWPFY----ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN  192 (311)
Q Consensus       120 ~~a~~~~~~~l---~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~  192 (311)
                      ++++..++.++   .++| |+|++..+.|.+.    ...++..|.+++.++... +++.++++++++.++++++++++++
T Consensus        87 t~~l~~~~~~~~~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~i~~~~~lv~i~~  164 (397)
T TIGR01976        87 TSLTFLLSRAISRRWGPG-DEVIVTRLDHEANISPWLQAAERAGAKVKWARVDE-ATGELHPDDLASLLSPRTRLVAVTA  164 (397)
T ss_pred             HHHHHHHHHHHHhcCCCC-CEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccc-cCCCcCHHHHHHhcCCCceEEEEeC
Confidence            99998877776   5789 9999999998654    355677899999998753 2467899999999998999999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      |+||||..++   +++|.++|+++|+++++|+++..    +.....+..   .+..+++.|++|.+   |.|+|+++++.
T Consensus       165 ~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~~~---~~~d~~~~s~~K~~---g~~~G~l~~~~  231 (397)
T TIGR01976       165 ASNTLGSIVD---LAAITELVHAAGALVVVDAVHYA----PHGLIDVQA---TGADFLTCSAYKFF---GPHMGILWGRP  231 (397)
T ss_pred             CCCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc----cccCCCHHH---cCCCEEEEechhhc---CCceEEEEEcH
Confidence            9999999998   99999999999999999999853    212222222   22337778999986   45789998854

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.88  E-value=5.1e-21  Score=176.55  Aligned_cols=195  Identities=17%  Similarity=0.163  Sum_probs=148.8

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCc----chHHHHHHc
Q 021547           80 FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWP----FYESFAKRN  155 (311)
Q Consensus        80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~----~~~~~~~~~  155 (311)
                      +.+|+. +...+|++.++++.+        .++.+++++++.++..++.+++++| |+|+++...|.    .+...++..
T Consensus        64 Y~r~~~-p~~~~le~~lA~l~g--------~~~al~~~sG~~Ai~~~l~all~~G-d~Vl~~~~~~~~t~~~~~~~~~~~  133 (403)
T PRK07810         64 YSRYGN-PTVSMFEERLRLIEG--------AEACFATASGMSAVFTALGALLGAG-DRLVAARSLFGSCFVVCNEILPRW  133 (403)
T ss_pred             eeCCCC-chHHHHHHHHHHHhC--------CCcEEEECChHHHHHHHHHHHhCCC-CEEEEccCCcchHHHHHHHHHHHc
Confidence            334444 457899999999983        3578888888999999999999999 99999886653    345567788


Q ss_pred             CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547          156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP  235 (311)
Q Consensus       156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~  235 (311)
                      |++++.++.       .|++.+++++++++++|++++|+||+|.+.+   +++|+++|+++|+++|+|++|+...+..  
T Consensus       134 G~~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~--  201 (403)
T PRK07810        134 GVETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQR--  201 (403)
T ss_pred             CcEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccCC--
Confidence            999998864       2889999999999999999999999999998   9999999999999999999998643321  


Q ss_pred             CCcccccCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          236 YIPMGVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       236 ~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                        ++. +   +..+++.|++|.++.+|.++ |++++++.       .+.++++.+ .......+++.++.+.+-|+
T Consensus       202 --~~~-~---gaDivv~S~tK~l~g~g~~~gG~v~~~~~-------~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~  264 (403)
T PRK07810        202 --GLP-L---GADVVVYSGTKHIDGQGRVLGGAILGDRE-------YIDGPVQKLMRHTGPALSAFNAWVLLKGLE  264 (403)
T ss_pred             --hhh-c---CCcEEEccCCceecCCcCceeEEEEeChH-------HHHHHHHHHHHHhCCCCCHHHHHHHHhccC
Confidence              111 1   23489999999999999998 66665432       122334433 33445778888887766554

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.88  E-value=1.2e-20  Score=174.95  Aligned_cols=233  Identities=15%  Similarity=0.112  Sum_probs=163.2

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN------CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      ++++++|+.++   |.++..+|.+++++.++++.....      .|.......+|++.+++++.        .+..++++
T Consensus        44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--------~~~~l~~~  112 (402)
T TIGR01821        44 AKDVTVWCSND---YLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--------KESALVFT  112 (402)
T ss_pred             CeeEEEeEccC---cCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--------CCeEEEEC
Confidence            47789999998   567899999999999988742211      12222345678888888773        23456666


Q ss_pred             ChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC---C-CccEEEEe
Q 021547          118 GCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD---E-NTAAIVII  191 (311)
Q Consensus       118 g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~-~~~~i~i~  191 (311)
                      +|++++..++..+..  ++ +.|+.....|......++..|.++..++.       .|.+++++.++   + ++++++++
T Consensus       113 sG~~an~~ai~~l~~~~~~-~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e  184 (402)
T TIGR01821       113 SGYVANDATLATLAKIIPG-CVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFE  184 (402)
T ss_pred             chHHHHHHHHHHhhCCCCC-CEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEc
Confidence            668899988888865  67 77777777777777777888887765542       26666766654   2 57889999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEe
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      +|+||+|.+.+   +++|.++|+++|+++|+||+|+...++..........+- ....|+++||||.|+++|   ||+++
T Consensus       185 ~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~  258 (402)
T TIGR01821       185 SVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAA  258 (402)
T ss_pred             CCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeec
Confidence            99999999998   899999999999999999999843332111111111111 123588899999999988   99876


Q ss_pred             eCCCCccchhhHHHHHhhhh---ccccCCCchhHHHHHhhhh
Q 021547          271 NDPNGVLQKSGIVGSIKACL---GVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~  309 (311)
                      +.        ++++.+....   .++.+.++.+++++.+.|+
T Consensus       259 ~~--------~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~  292 (402)
T TIGR01821       259 SR--------KLIDAIRSYAPGFIFTTSLPPAIAAGATASIR  292 (402)
T ss_pred             CH--------HHHHHHHHhCcCceecCcCCHHHHHHHHHHHH
Confidence            43        3667666432   2234567777777766654

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.88  E-value=9.4e-21  Score=174.23  Aligned_cols=190  Identities=20%  Similarity=0.161  Sum_probs=141.7

Q ss_pred             CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEE
Q 021547           85 PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVR  160 (311)
Q Consensus        85 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~  160 (311)
                      +.+...+|+++++++++.        +..++++++++|+.+++.+++++| |+|+++.|.|......+    +..|++++
T Consensus        59 ~~p~~~~Le~~lA~~~g~--------~~~i~~~sG~~Ai~~~l~all~~G-d~Vl~~~~~y~~t~~~~~~~~~~~gi~~~  129 (388)
T PRK07811         59 GNPTRTALEEQLAALEGG--------AYGRAFSSGMAATDCLLRAVLRPG-DHIVIPNDAYGGTFRLIDKVFTRWGVEYT  129 (388)
T ss_pred             CCccHHHHHHHHHHHhCC--------CceEEeCCHHHHHHHHHHHHhCCC-CEEEEcCCCchHHHHHHHHhCcCCCeEEE
Confidence            346788999999999943        234555667899999999999999 99999999998543332    23577777


Q ss_pred             EeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccc
Q 021547          161 HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG  240 (311)
Q Consensus       161 ~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~  240 (311)
                      .++.       .|++.+++.+++++++|++++|+||+|...+   +++|.++|+++|+++|+|++|+.....    .++.
T Consensus       130 ~~d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~p~~  195 (388)
T PRK07811        130 PVDL-------SDLDAVRAAITPRTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQ----QPLA  195 (388)
T ss_pred             EeCC-------CCHHHHHHhcCcCCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccC----Cchh
Confidence            6653       3889999999889999999999999999877   999999999999999999999864321    1221


Q ss_pred             ccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547          241 VFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       241 ~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  308 (311)
                       .   +..+++.|++|.++.+| .+.||++++++       ++.++++.... .....+++.++.+..-|
T Consensus       196 -~---gaDivv~S~sK~l~g~~~~~gG~vv~~~~-------~l~~~~~~~~~~~g~~~s~~~a~l~~~~L  254 (388)
T PRK07811        196 -L---GADVVVHSTTKYIGGHSDVVGGALVTNDE-------ELDEAFAFLQNGAGAVPGPFDAYLTLRGL  254 (388)
T ss_pred             -h---CCcEEEecCceeecCCCCcEEEEEEECCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Confidence             1   12399999999998865 57799887654       35666655533 23455666555444433

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.88  E-value=1.5e-20  Score=175.44  Aligned_cols=204  Identities=20%  Similarity=0.251  Sum_probs=154.8

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--C---CCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN--C---YAP---MFGLPLARRAVAEYLNRDLPYKLSADDIYI  115 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~--~---Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~  115 (311)
                      +.+++.|+++..     .+.++.+.+++.+.+......  .   |..   ...+.++|+.++++++.     -.+++|++
T Consensus        30 ~~~~iyLd~a~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~   99 (424)
T PLN02855         30 GSKLVYLDNAAT-----SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINA-----STSREIVF   99 (424)
T ss_pred             CCCeEEeeCccc-----cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCC-----CCCCEEEE
Confidence            457899999874     356788999988876522110  1   110   11245888899988843     13579999


Q ss_pred             eCChHHHHHHHHHHH----hcCCCCEEEecCCCCcc----hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547          116 TLGCMEAVEIILTVI----TRLGAANILLPRPGWPF----YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA  187 (311)
Q Consensus       116 t~g~~~a~~~~~~~l----~~~g~d~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  187 (311)
                      |+|+++++..++.++    +++| |+|+++.+.|++    +...++..|.+++.+++..  ++.++++.+++.+++++++
T Consensus       100 t~g~t~al~~i~~~~~~~~~~~g-d~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~l  176 (424)
T PLN02855        100 TRNATEAINLVAYTWGLANLKPG-DEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTP--DEVLDVEQLKELLSEKTKL  176 (424)
T ss_pred             eCCHHHHHHHHHHHhhhhcCCCc-CEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCC--CCCcCHHHHHHHhccCceE
Confidence            999999999998864    5789 999999998874    4556678899999998753  3458999999999889999


Q ss_pred             EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeE
Q 021547          188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW  267 (311)
Q Consensus       188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~  267 (311)
                      +++++++||||..+|   +++|.++|+++|+++++|++|+.    +.....+..+.   ..+++.|++|.+|.+|  +||
T Consensus       177 v~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~----g~~~~~~~~~~---~d~~~~s~~K~~gp~G--~G~  244 (424)
T PLN02855        177 VATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSV----PHMPVDVQTLG---ADFLVASSHKMCGPTG--IGF  244 (424)
T ss_pred             EEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhc----CCcCCCchhcC---CCEEEeecccccCCCc--cEE
Confidence            999999999999999   78999999999999999999964    22222232222   3488999999776555  899


Q ss_pred             EEeeC
Q 021547          268 LATND  272 (311)
Q Consensus       268 i~~~~  272 (311)
                      ++++.
T Consensus       245 l~~~~  249 (424)
T PLN02855        245 LWGKS  249 (424)
T ss_pred             EEEch
Confidence            98754

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.87  E-value=9.9e-21  Score=173.33  Aligned_cols=189  Identities=16%  Similarity=0.155  Sum_probs=147.2

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~  162 (311)
                      +....|+++++++.        ..+++++++|+++++.+++.+++++| |+|+++.|.|.....    .....|++++.+
T Consensus        53 pt~~~Le~~lA~le--------g~e~ivvt~gg~~Ai~~~l~all~~G-d~Il~~~~~y~~~~~~~~~~~~~~gi~v~~v  123 (388)
T PRK08861         53 PNRGLLEQTLSELE--------SGKGAVVTNCGTSALNLWVSALLGPD-DLIVAPHDCYGGTYRLFNTRANKGDFKVQFV  123 (388)
T ss_pred             chHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHcCCC-CEEEEcCCchHHHHHHHHHHHhcCCeEEEEE
Confidence            46788999999998        35799999999999999999999999 999999999986433    233456777776


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      +.       .|++.+++++++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|....+.    .++. +
T Consensus       124 d~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~----~pl~-~  188 (388)
T PRK08861        124 DQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ----KPLE-L  188 (388)
T ss_pred             CC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC----CCcc-c
Confidence            42       4889999999889999999999999999999   788999999999999999999864322    1221 1


Q ss_pred             CCCCCeEEEecCcccCCCC-cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          243 GSIVPVITLGSISKRWIVP-GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      .   -.++++|++|.++.+ +...|++++.++       ++.++++.... .+...+|+..+.+.+-|+
T Consensus       189 G---aDivv~S~tK~l~G~~d~~gG~i~~~~~-------~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~  247 (388)
T PRK08861        189 G---ADFVIHSTTKYINGHSDVIGGVLITKTK-------EHAEELAWWGNCIGATGTPFDSYMTLRGIR  247 (388)
T ss_pred             C---CCEEEeecceeccCCCcceeEEEEecHH-------HHHHHHHHHHhccCCCCChHHHHHHHhcCC
Confidence            2   238999999998875 478899887543       35666665533 356677887776665554

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.87  E-value=1.4e-20  Score=174.22  Aligned_cols=206  Identities=24%  Similarity=0.276  Sum_probs=156.1

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP-----MFGLPLARRAVAEYLNRDLPYKLSADDIYITLG  118 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g  118 (311)
                      +..+++++.|.|+    ++.|+.+.+++.+. .  ....|.+     ..|..++++++++++.+.+|.+  .++++++++
T Consensus        19 ~~~~~~l~~g~~~----~~~p~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~--~~~v~~~~~   89 (398)
T cd00613          19 DQSMSFLGSGTYK----HNPPAVIKRNILEN-E--FYTAYTPYQPEISQGRLQALFELQTMLCELTGMD--VANASLQDE   89 (398)
T ss_pred             ccCcccccccccC----CcCcHHHHHHhccc-c--CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC--ccceeccCc
Confidence            4567999999965    66777777766655 2  2234555     6799999999999999987753  346766664


Q ss_pred             hH-HHHHHHHHHHhcC--CCCEEEecCCCCcchHHHHHHcC----cEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEe
Q 021547          119 CM-EAVEIILTVITRL--GAANILLPRPGWPFYESFAKRNH----IEVRHFDLLPERGWEVDLEAVEALADENTAAIVII  191 (311)
Q Consensus       119 ~~-~a~~~~~~~l~~~--g~d~Vl~~~p~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~  191 (311)
                      ++ ++..+++.++..+  | |+|+++.+.|+.+...+...+    .+++.++..  +++.+|++++++.+.+++++++++
T Consensus        90 g~~~~~~~~~~~~~~~~~g-d~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~t~~viv~  166 (398)
T cd00613          90 ATAAAEAAGLAAIRAYHKR-NKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSD--EGGTVDLEALKEEVSEEVAALMVQ  166 (398)
T ss_pred             hHHHHHHHHHHHHhcccCC-CEEEEcCccCcchHHHHHHhcccCCcEEEEeccC--CCCCcCHHHHHHhcCCCeEEEEEE
Confidence            44 4555556666665  8 999999999999988888777    888888764  345689999999998899999999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC----cceeeE
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP----GWRFGW  267 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~  267 (311)
                      +|+ |+|.+.+  .+++|.++|+++|+++|+|++|......    .....   .+..+++.|++|++ +|    |+++||
T Consensus       167 ~~~-~~G~~~~--~l~~i~~la~~~g~~livD~~~~~~~~~----~~~~~---~~~d~~~~s~~K~~-~p~g~Ggp~~g~  235 (398)
T cd00613         167 YPN-TLGVFED--LIKEIADIAHSAGALVYVDGDNLNLTGL----KPPGE---YGADIVVGNLQKTG-VPHGGGGPGAGF  235 (398)
T ss_pred             CCC-CCceecc--hHHHHHHHHHhcCCEEEEEeccccccCC----CChHH---cCCCEEEeeccccC-CCCCCCCCceeE
Confidence            985 8999853  4699999999999999999987642211    11111   12459999999997 66    799999


Q ss_pred             EEeeC
Q 021547          268 LATND  272 (311)
Q Consensus       268 i~~~~  272 (311)
                      +.++.
T Consensus       236 l~~~~  240 (398)
T cd00613         236 FAVKK  240 (398)
T ss_pred             EEEhh
Confidence            99854

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.87  E-value=2e-20  Score=173.63  Aligned_cols=232  Identities=15%  Similarity=0.137  Sum_probs=159.6

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF------NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      ++++++|+..+   |.++..+|.+.+++.+.+.....      ..|.+.....+|++.+++++.       .+ ..++.+
T Consensus        45 ~~~~~~~~s~d---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-------~~-~~~~~~  113 (407)
T PRK09064         45 EREVTVWCSND---YLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-------KE-AALVFT  113 (407)
T ss_pred             CceEEEEECCC---CcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-------CC-cEEEEC
Confidence            47799999998   45788899999999988764221      113333456678888888772       23 344444


Q ss_pred             ChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEe
Q 021547          118 GCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVII  191 (311)
Q Consensus       118 g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~  191 (311)
                      +|+++...++..+..  ++ +.|+.....|......++..+.+...++.       .|++++++.++    +++++++++
T Consensus       114 sG~~an~~ai~~l~~~~~~-~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~  185 (407)
T PRK09064        114 SGYVSNDATLSTLAKLIPD-CVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFE  185 (407)
T ss_pred             cHHHHHHHHHHHHhCCCCC-CEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEe
Confidence            556787777777764  67 77777777777777777778877665543       26677777664    467899999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEe
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      +++||+|...+   +++|.++|+++|+++|+||+|+...++..........+. ....|+++||||.||++|   ||+++
T Consensus       186 ~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~  259 (407)
T PRK09064        186 SVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAG  259 (407)
T ss_pred             CCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEec
Confidence            99999999998   999999999999999999999843332111111111111 223688999999999888   99887


Q ss_pred             eCCCCccchhhHHHHHhhhhc---cccCCCchhHHHHHhhh
Q 021547          271 NDPNGVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l  308 (311)
                      +.        ++++.+.....   ++.+.++.+++++.+.|
T Consensus       260 ~~--------~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al  292 (407)
T PRK09064        260 SA--------ALVDAVRSYAPGFIFTTSLPPAIAAAALASI  292 (407)
T ss_pred             CH--------HHHHHHHHhCccccccCcCCHHHHHHHHHHH
Confidence            43        36666654422   23455666666665554

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.87  E-value=9.9e-21  Score=174.26  Aligned_cols=188  Identities=18%  Similarity=0.167  Sum_probs=145.5

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~  162 (311)
                      +...+|++.++++.        ..+++++++|+++|+.+++.+++++| |+|+++.|.|..+..    .+...|++++.+
T Consensus        65 pt~~~Le~~lA~l~--------g~~~~l~~~sgt~Ai~~~l~al~~~G-D~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~v  135 (394)
T PRK07050         65 PTSLALAQRLAEIE--------GGRHALLQPSGLAAISLVYFGLVKAG-DDVLIPDNAYGPNRDHGEWLARDFGITVRFY  135 (394)
T ss_pred             HHHHHHHHHHHHHh--------CCCeEEEeccHHHHHHHHHHHHhCCC-CEEEEecCCcccHHHHHHHHHHhcCeEEEEE
Confidence            45678888888887        34689999999999999999999999 999999999998663    567789998887


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      +..       +.+.+++.+++++++|++++|+||+|..   .++++|.++|+++|+++|+|++|....+    ..++.  
T Consensus       136 d~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~~~----~~~l~--  199 (394)
T PRK07050        136 DPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAGLA----FKPFE--  199 (394)
T ss_pred             CCC-------CHHHHHHhcCCCCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCcccccc----cCHHH--
Confidence            531       4577888999999999999999999754   4599999999999999999999976322    11111  


Q ss_pred             CCCCCeEEEecCcccCCC-CcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547          243 GSIVPVITLGSISKRWIV-PGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  308 (311)
                        .+..|++.|+||.++. .+.+.|++++.++       +++++++..+. .+.+.+++..+.+.+.|
T Consensus       200 --~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~-------~~~~~~~~~~~~~G~~~~~~~a~l~lr~l  258 (394)
T PRK07050        200 --HGVDISVQALTKYQSGGSDVLMGATITADA-------ELHAKLKLARMRLGIGVSADDCSLVLRGL  258 (394)
T ss_pred             --cCCeEEEEECCceecCCCCeeEEEEEECCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHcCC
Confidence              1234999999999864 3467899887654       36777766543 45567777766655443

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.87  E-value=1.6e-20  Score=171.99  Aligned_cols=191  Identities=17%  Similarity=0.147  Sum_probs=149.4

Q ss_pred             CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEE
Q 021547           85 PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVR  160 (311)
Q Consensus        85 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~  160 (311)
                      ..+...+|++.+++++.        .++.++++++++|+..++.+++++| |+|+++.+.|.+...    .++..|.++.
T Consensus        38 ~~p~~~~le~~la~l~g--------~~~a~~~~sG~~Ai~~~l~~l~~~g-d~Vl~~~~~y~~~~~~~~~~~~~~g~~~~  108 (369)
T cd00614          38 GNPTVDALEKKLAALEG--------GEAALAFSSGMAAISTVLLALLKAG-DHVVASDDLYGGTYRLFERLLPKLGIEVT  108 (369)
T ss_pred             CChhHHHHHHHHHHHHC--------CCCEEEEcCHHHHHHHHHHHHcCCC-CEEEECCCCcchHHHHHHHHHhhcCeEEE
Confidence            34567889999998883        3567888888999999999999999 999999999987543    3557788888


Q ss_pred             EeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccc
Q 021547          161 HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG  240 (311)
Q Consensus       161 ~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~  240 (311)
                      .++..       +++.+++.+++++++|++.+|+||+|.+.+   +++|.++|+++|+++|+|++|+...+.    .++.
T Consensus       109 ~v~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~----~~~~  174 (369)
T cd00614         109 FVDPD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ----RPLE  174 (369)
T ss_pred             EeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC----Chhh
Confidence            87642       688999999889999999999999999998   899999999999999999999864331    1111


Q ss_pred             ccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhh
Q 021547          241 VFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       241 ~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~  309 (311)
                          .+..+++.|+||.++.+| .+.||++++++       +++++++... ..+...+++.++++.+.|+
T Consensus       175 ----~g~Divv~S~tK~l~g~~~~~gG~v~~~~~-------~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~  234 (369)
T cd00614         175 ----LGADIVVHSATKYIGGHSDVIAGVVVGSGE-------ALIQRLRFLRLALGTILSPFDAWLLLRGLK  234 (369)
T ss_pred             ----hCCcEEEeccceeccCCCCceEEEEEeCcH-------HHHHHHHHHHHhhCCCCCHHHHHHHHcCCC
Confidence                123489999999998877 88999997542       3666666553 2445677777776655543

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.87  E-value=1.4e-20  Score=173.14  Aligned_cols=188  Identities=17%  Similarity=0.151  Sum_probs=142.2

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~  162 (311)
                      +...+|++.++++++        .+..++++++++++.+++.+++++| |+|+++.|.|...    ...+...|++++.+
T Consensus        59 p~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~~~G-d~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~v  129 (391)
T TIGR01328        59 PTVSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTILKAG-DHLISDECLYGCTFALLEHALTKFGIQVDFI  129 (391)
T ss_pred             chHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCC-CEEEEecCcchHHHHHHHHHHhcCCeEEEEE
Confidence            356789999999994        3457888888999999999999999 9999999988643    34556688888888


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      ++.       |++.+++.+++++++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|+...+ +.   ++.. 
T Consensus       130 d~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~-~~---~~~~-  194 (391)
T TIGR01328       130 NMA-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPML-TN---PVAL-  194 (391)
T ss_pred             CCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhcc-CC---chhc-
Confidence            752       789999999889999999999999999998   88999999999999999999985332 11   1211 


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh--c-cccCCCchhHHHHHhhh
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL--G-VRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~q~~~~~~l  308 (311)
                         +..+++.|+||.++.+|.++|.+++.++       +++++++...  . .+...+++..+.+.+-|
T Consensus       195 ---g~Divv~S~sK~lgg~g~~~gG~v~~~~-------~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L  253 (391)
T TIGR01328       195 ---GVDVVVHSATKYIGGHGDVVAGLICGKA-------ELLQQIRMVGIKDMTGSVISPFDAWLILRGL  253 (391)
T ss_pred             ---CCCEEEccccccccCCCCceEEEEEcCH-------HHHHHHHHHHHHhCCCCCCCcHHHHHHHhCc
Confidence               2238899999999999988655444443       3666666431  1 23355666555555444

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.87  E-value=2.1e-20  Score=173.24  Aligned_cols=217  Identities=14%  Similarity=0.076  Sum_probs=157.5

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS------SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG  118 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g  118 (311)
                      ...++|..+.      ...++.+++++...+..      +....|....+..++++..++++.+.+|.+  ...|++++ 
T Consensus        19 ~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~~s-   89 (402)
T cd00378          19 RETLELIASE------NFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQPHS-   89 (402)
T ss_pred             HhCeeeeccC------CcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeecCC-
Confidence            4578887775      24578999999876521      112245556677788887777776666643  34555554 


Q ss_pred             hHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH-----HHHcCcEEEEeeccCC-CCcccCHHHHHhhcC-CCccEEEEe
Q 021547          119 CMEAVEIILTVITRLGAANILLPRPGWPFYESF-----AKRNHIEVRHFDLLPE-RGWEVDLEAVEALAD-ENTAAIVII  191 (311)
Q Consensus       119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~-----~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~-~~~~~i~i~  191 (311)
                      +++++..++.+++++| |+|+++.|.|..+...     ++..|.+++.+++..+ +++.+|++.+++.+. .++++++++
T Consensus        90 gt~a~~~~l~~l~~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~  168 (402)
T cd00378          90 GSQANLAVYFALLEPG-DTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAG  168 (402)
T ss_pred             cHHHHHHHHHHhcCCC-CEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEec
Confidence            5799999999999999 9999999999866433     6667877777776443 267899999999884 588999988


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc-cCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY-GHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay-~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      +++||+  ..+   +++|+++|+++|+++|+|++| .++.+.|....++.  .   ..++++|+||++  +|+|.||+++
T Consensus       169 ~~~~~~--~~~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~---~dv~~~s~sK~l--~G~~gg~i~~  236 (402)
T cd00378         169 ASAYPR--PID---FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--G---ADVVTTTTHKTL--RGPRGGLILT  236 (402)
T ss_pred             CcccCC--CcC---HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--C---CcEEEeccccCC--CCCCceEEEe
Confidence            888764  334   899999999999999999996 44555443222332  1   127899999985  8899999998


Q ss_pred             eCCCCccchhhHHHHHhhhh
Q 021547          271 NDPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~  290 (311)
                      +++       ++++++....
T Consensus       237 ~~~-------~~~~~l~~~~  249 (402)
T cd00378         237 RKG-------ELAKKINSAV  249 (402)
T ss_pred             ccH-------HHHHHHHHHh
Confidence            653       3667766543

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.87  E-value=1.1e-20  Score=172.84  Aligned_cols=194  Identities=18%  Similarity=0.175  Sum_probs=146.0

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHc
Q 021547           80 FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRN  155 (311)
Q Consensus        80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~  155 (311)
                      +.+|+. +...+|++.++++.+.        +..++++|+++++.+++ .++++| |+|+++.|.|.+.    ...++..
T Consensus        46 y~r~~~-pt~~~le~~la~l~g~--------~~~~~~~sG~~ai~~~~-~ll~~G-d~Vl~~~~~y~~t~~~~~~~~~~~  114 (366)
T PRK08247         46 YSRTGN-PTRGVLEQAIADLEGG--------DQGFACSSGMAAIQLVM-SLFRSG-DELIVSSDLYGGTYRLFEEHWKKW  114 (366)
T ss_pred             ccCCCC-chHHHHHHHHHHHhCC--------CcEEEEcCHHHHHHHHH-HHhCCC-CEEEEecCCcCcHHHHHHHHhhcc
Confidence            334444 4578899999999842        34577888899999876 567899 9999999999864    3455668


Q ss_pred             CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547          156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP  235 (311)
Q Consensus       156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~  235 (311)
                      |++++.++.       .|++.+++.++++++++++++|+||+|.   ..++++|+++|+++|+++|+|++|...... . 
T Consensus       115 G~~v~~vd~-------~d~~~l~~~i~~~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~~~~~~-~-  182 (366)
T PRK08247        115 NVRFVYVNT-------ASLKAIEQAITPNTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFYTPVLQ-R-  182 (366)
T ss_pred             CceEEEECC-------CCHHHHHHhcccCceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcccccc-C-
Confidence            999888864       3889999999889999999999999865   456999999999999999999999642221 1 


Q ss_pred             CCcccccCCCCCeEEEecCcccCCCC-cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          236 YIPMGVFGSIVPVITLGSISKRWIVP-GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       236 ~~~~~~~~~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                        ++.    .+..|+++|+||.++.+ +++.|+++++++       .++++++..+. ...+.+++.|+++.+.|+
T Consensus       183 --p~~----~g~di~i~S~sK~~~g~~d~~~G~iv~~~~-------~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~  245 (366)
T PRK08247        183 --PLE----EGADIVIHSATKYLGGHNDVLAGLVVAKGQ-------ELCERLAYYQNAAGAVLSPFDSWLLIRGMK  245 (366)
T ss_pred             --chh----cCCcEEEeecceeccCCCceeeeEEecChH-------HHHHHHHHHHHhcCCCCChHHHHHHHhccC
Confidence              111    23459999999998765 569999887543       36666665543 345678888888766553

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.87  E-value=1.8e-20  Score=172.01  Aligned_cols=188  Identities=15%  Similarity=0.131  Sum_probs=142.9

Q ss_pred             CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH---HHcCcEEEEe
Q 021547           86 MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA---KRNHIEVRHF  162 (311)
Q Consensus        86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~---~~~g~~~~~~  162 (311)
                      .+...+|++.+++++.        .+++++++|+++|+..++.+++++| |+|+++.+.|..+...+   +..|+++..+
T Consensus        52 np~~~~lE~~lA~l~g--------~~~~l~~~sG~~Ai~~~l~~ll~~G-D~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~  122 (385)
T PRK08574         52 NPTLRPLEEALAKLEG--------GVDALAFNSGMAAISTLFFSLLKAG-DRVVLPMEAYGTTLRLLKSLEKFGVKVVLA  122 (385)
T ss_pred             CccHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCC-CEEEEcCCCchhHHHHHHHhhccCcEEEEE
Confidence            3467899999999993        4578889999999999999999999 99999999999876655   4457666654


Q ss_pred             eccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547          163 DLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV  241 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~  241 (311)
                      +        ++.+.+++.+++ +++++++.+|+||||.+++   +++|+++|+++|+++|+|++|+....    ..++. 
T Consensus       123 ~--------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~----~~~l~-  186 (385)
T PRK08574        123 Y--------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLL----YRPLR-  186 (385)
T ss_pred             C--------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----CChhh-
Confidence            3        367899999987 8999999999999999999   88999999999999999999974221    11121 


Q ss_pred             cCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547          242 FGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       242 ~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  308 (311)
                         .+..+++.|+||.++.+|-.+ |++++.++       +++++++.... .+...+++..+.+.+-|
T Consensus       187 ---~GaDivv~S~sK~l~g~~d~~gG~vi~~~~-------~~~~~~~~~~~~~g~~~~p~~a~l~l~~l  245 (385)
T PRK08574        187 ---HGADFVVHSLTKYIAGHNDVVGGVAVAWSG-------EFLEELWEWRRRLGTIMQPFEAYLVLRGL  245 (385)
T ss_pred             ---hCCcEEEeeCceeecCCCCceeEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHccc
Confidence               123499999999998888765 66776543       36666665533 34455666555544433

>PRK06460 hypothetical protein; Provisional

Probab=99.87  E-value=1.9e-20  Score=171.59  Aligned_cols=183  Identities=14%  Similarity=0.151  Sum_probs=133.6

Q ss_pred             CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCc----chHHHHHHcCcEEEE
Q 021547           86 MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWP----FYESFAKRNHIEVRH  161 (311)
Q Consensus        86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~----~~~~~~~~~g~~~~~  161 (311)
                      .+...+|+++++++++.      . ..+++ +++++++..++.+++++| |+|+++.+.|.    .|...++..|+++..
T Consensus        44 ~p~~~~L~~~lA~l~g~------~-~~v~~-~sG~~ai~~~l~al~~~G-d~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~  114 (376)
T PRK06460         44 NPTVLELTKKIVELENA------E-MGVAF-SSGMGAISTTALALLKPG-NSVLVHRDMFGRSYRFFTDYLKNWGVNVDA  114 (376)
T ss_pred             CccHHHHHHHHHHHhCC------C-cEEEe-CCHHHHHHHHHHHHhCCC-CEEEEecCCcCcHHHHHHHHHHhhCcEEEE
Confidence            45788999999999842      2 24444 555789999999999999 99999976553    455678889999888


Q ss_pred             eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547          162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV  241 (311)
Q Consensus       162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~  241 (311)
                      ++..       +.+.+++.++++++++++++|+||||.+++   +++|.++|+++|+++|+|++|+... .   ..++  
T Consensus       115 ~~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~-~---~~~l--  178 (376)
T PRK06460        115 SNPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPI-N---QKPL--  178 (376)
T ss_pred             ECCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCccc-c---CChh--
Confidence            7642       234456666778999999999999999999   6778999999999999999998531 1   1111  


Q ss_pred             cCCCCCeEEEecCcccCCCC-cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHH
Q 021547          242 FGSIVPVITLGSISKRWIVP-GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVC  303 (311)
Q Consensus       242 ~~~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~  303 (311)
                        ..+..|++.|+||.|+.+ |.++||++++.        +++++++.... .+.+.++...+.
T Consensus       179 --~~~~divv~S~sK~l~G~~~~~~G~~~~~~--------~l~~~l~~~~~~~g~~~~~~~a~~  232 (376)
T PRK06460        179 --ELGADIVVHSASKFLAGHNDVIAGLAAGYG--------KLLNVIDQMRRTLGTSLDPHAAYL  232 (376)
T ss_pred             --hcCCCEEEeecceeccCCCCceEEEEecCH--------HHHHHHHHHHHhcCCCCCHHHHHH
Confidence              112459999999998644 37899988642        36777765533 333445544443

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.87  E-value=8.3e-21  Score=176.26  Aligned_cols=160  Identities=23%  Similarity=0.185  Sum_probs=133.1

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~  162 (311)
                      +...+|++.++++++        .+..+++++++.++..++.+++++| |+|+++.+.|.+.    ...++..|++++.+
T Consensus        57 p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~~l~~~G-d~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v  127 (418)
T TIGR01326        57 PTTDVLEQRIAALEG--------GVAALAVASGQAAITYAILNLAQAG-DNIVSSSYLYGGTYNLFKHTLKRLGIEVRFV  127 (418)
T ss_pred             hhHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCC-CEEEEECCCcHHHHHHHHHHHHHcCcEEEEE
Confidence            456788999998883        3568899999999999999999999 9999999998653    34567789999888


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      +..       |++.+++.++++++++++++|+||+|.+.+   +++|.++|+++|+++|+|++|+...+    ..++   
T Consensus       128 ~~~-------d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~----~~~l---  190 (418)
T TIGR01326       128 DPD-------DPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL----CRPI---  190 (418)
T ss_pred             CCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc----CCch---
Confidence            641       789999999989999999999999999998   89999999999999999999974211    1121   


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                       ..+..|++.|+||.++.+|+|+||++++..
T Consensus       191 -~~g~Divv~S~sK~l~g~G~~lGg~v~~~~  220 (418)
T TIGR01326       191 -DHGADIVVHSATKYIGGHGTAIGGVIVDGG  220 (418)
T ss_pred             -hcCCeEEEECccccccCCccceEEEEEecc
Confidence             123569999999999999999999998653

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.86  E-value=3.8e-20  Score=169.92  Aligned_cols=188  Identities=22%  Similarity=0.281  Sum_probs=142.3

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCc
Q 021547           82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHI  157 (311)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~  157 (311)
                      +|.. +...++++.++++++        .+++++++++++++.+++.+++++| |+|+++.+.|.+.    ...++..|.
T Consensus        50 r~~~-p~~~~le~~la~l~g--------~~~~~~~~sG~~Ai~~al~al~~~G-d~Vl~~~~~~~~t~~~~~~~~~~~g~  119 (380)
T TIGR01325        50 RYAN-PTVAAFEERIAALEG--------AERAVATATGMSAIQAALMTLLQAG-DHVVASRSLFGSTVGFISEILPRFGI  119 (380)
T ss_pred             cCCC-chHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCC-CEEEEecCCcchHHHHHHHHHHHhCC
Confidence            4443 457889999999883        3578889999999999999999999 9999999888653    346677899


Q ss_pred             EEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCC
Q 021547          158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI  237 (311)
Q Consensus       158 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~  237 (311)
                      +++.++..       |++.+++.+++++++|++++|+||+|...+   +++|.++|+++|+++|+|++|....+. .   
T Consensus       120 ~v~~v~~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~-~---  185 (380)
T TIGR01325       120 EVSFVDPT-------DLNAWEAAVKPNTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQ-Q---  185 (380)
T ss_pred             EEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC-C---
Confidence            98888652       788999988889999999999999999998   899999999999999999999864321 1   


Q ss_pred             cccccCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHH
Q 021547          238 PMGVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEM  305 (311)
Q Consensus       238 ~~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~  305 (311)
                      ++. +   +..|++.|+||.++.+|.++ |++++ ++       ++++.++... ..+...+++..+.+.
T Consensus       186 pl~-~---g~Divv~S~sK~l~g~g~~~gG~vv~-~~-------~~~~~l~~~~~~~g~~~~p~~a~~~l  243 (380)
T TIGR01325       186 PLK-L---GADVVVYSATKHIDGQGRVMGGVIAG-SE-------ELMAEVAVYLRHTGPAMSPFNAWVLL  243 (380)
T ss_pred             chh-h---CCCEEEeeccceecCCCCeEEEEEEe-CH-------HHHHHHHHHHHhhCCCCCHHHHHHHH
Confidence            111 1   23488899999999999888 55554 32       3566666553 223344555444443

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.86  E-value=3e-20  Score=170.99  Aligned_cols=189  Identities=16%  Similarity=0.119  Sum_probs=137.9

Q ss_pred             CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEE
Q 021547           86 MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRH  161 (311)
Q Consensus        86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~  161 (311)
                      .+...+|++.++++++        .++.+++++++.++..++.+++++| |+|+++.|.|......    .+..|+++..
T Consensus        60 ~pt~~~Le~~lA~l~G--------~~~al~~~sG~~Ai~~~l~al~~~G-d~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~  130 (386)
T PRK06767         60 NPTVKLFEERMAVLEG--------GEEALAFGSGMAAISATLIGFLKAG-DHIICSNGLYGCTYGFLEVLEEKFMITHSF  130 (386)
T ss_pred             CcchHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCC-CEEEEcCCcHHHHHHHHHHHHhhcCeEEEE
Confidence            3457899999999984        2345666666789999999999999 9999999988865443    3344555555


Q ss_pred             eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547          162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV  241 (311)
Q Consensus       162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~  241 (311)
                      ++.       .|++.+++++++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|....+ +.   ++. 
T Consensus       131 ~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~-~~---pl~-  195 (386)
T PRK06767        131 CDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYL-QR---PLE-  195 (386)
T ss_pred             eCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCccccc-CC---chh-
Confidence            432       3789999999889999999999999999999   89999999999999999999975322 11   121 


Q ss_pred             cCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHh-hhh-ccccCCCchhHHHHHhhhh
Q 021547          242 FGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIK-ACL-GVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       242 ~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~q~~~~~~l~  309 (311)
                      .   +..+++.|+||.++.+|.++ ||+++++        +++.++. ... ......+++.++++.+.|+
T Consensus       196 ~---g~Div~~S~sK~l~g~g~~~gG~v~~~~--------~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~  255 (386)
T PRK06767        196 L---GCDAVVHSATKYIGGHGDVVAGVTICKT--------RALAEKIRPMRKDIGGIMAPFDAWLLLRGLK  255 (386)
T ss_pred             c---CCcEEEecCcceecCCCCceeEEEEeCh--------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC
Confidence            1   12388899999999999986 8887754        2444432 222 2233456776666555443

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.86  E-value=1.4e-20  Score=171.61  Aligned_cols=190  Identities=15%  Similarity=0.108  Sum_probs=140.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC-CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEE
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPM-FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANIL  139 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl  139 (311)
                      .++++.+.+++.+.+.   ...|... .-..++++.+++++    |.+ ..+.+++++|+++++..++.+++++| |+|+
T Consensus         8 ~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~~~~~la~~~----g~~-~~~~~~~~~~~t~al~~~~~~~~~~g-~~vl   78 (356)
T cd06451           8 SNVPPRVLKAMNRPML---GHRSPEFLALMDEILEGLRYVF----QTE-NGLTFLLSGSGTGAMEAALSNLLEPG-DKVL   78 (356)
T ss_pred             cCCCHHHHHHhCCCcc---CCCCHHHHHHHHHHHHHHHHHh----cCC-CCCEEEEecCcHHHHHHHHHHhCCCC-CEEE
Confidence            4677888888864432   1122211 11335556666665    321 33457888888999999999999999 9999


Q ss_pred             ecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh
Q 021547          140 LPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKL  216 (311)
Q Consensus       140 ~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~  216 (311)
                      ++.++|.+  +...++..|.+++.++.++  ++.+|.+.+++.+++ +++++++++|+||+|..++   +++|.++|+++
T Consensus        79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~  153 (356)
T cd06451          79 VGVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKH  153 (356)
T ss_pred             EecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhc
Confidence            99888765  5677888999999998653  357899999999887 8999999999999999998   88899999999


Q ss_pred             CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          217 GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       217 ~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      |+++++|++|+.   +. ....+...   +..+++.|++|+++.| .++||+++++
T Consensus       154 ~~~li~D~~~~~---g~-~~~~~~~~---~~d~~~~s~~K~l~~p-~g~G~l~~~~  201 (356)
T cd06451         154 DALLIVDAVSSL---GG-EPFRMDEW---GVDVAYTGSQKALGAP-PGLGPIAFSE  201 (356)
T ss_pred             CCEEEEeeehhc---cC-cccccccc---CccEEEecCchhccCC-CCcceeEECH
Confidence            999999999873   11 12222222   2236678999998765 3689998854

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.86  E-value=4.9e-20  Score=169.11  Aligned_cols=191  Identities=22%  Similarity=0.191  Sum_probs=145.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCC-CC-----C--CCCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEeCChHHHHHHHHHHHh
Q 021547           61 FRTAAVAEDAIVDSVRSSMFN-CY-----A--PMFGLPLARRAVAEYLNRDLPYKLS-ADDIYITLGCMEAVEIILTVIT  131 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~-~Y-----~--~~~g~~~lr~~ia~~l~~~~g~~~~-~~~v~~t~g~~~a~~~~~~~l~  131 (311)
                      -++++.+.+++.+.+.....+ ..     .  ......++|+.++++++      .. ++++++|+|+++++..++.++.
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~g~t~a~~~~~~~l~   82 (373)
T cd06453           9 SQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFIN------APSPDEIIFTRNTTEAINLVAYGLG   82 (373)
T ss_pred             cCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCCHHHHHHHHHHHhh
Confidence            356788889988776422110 00     0  01234567788888884      23 6789999999999999999998


Q ss_pred             c---CCCCEEEecCCCCcch----HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547          132 R---LGAANILLPRPGWPFY----ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ  204 (311)
Q Consensus       132 ~---~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~  204 (311)
                      .   +| |+|+++.+.|++.    ...++..|++++.++.+  .++.+|++++++.+.++++++++++++||||...+  
T Consensus        83 ~~~~~g-~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~--  157 (373)
T cd06453          83 RANKPG-DEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP--  157 (373)
T ss_pred             hcCCCC-CEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC--
Confidence            7   88 9999999999874    34556789999999874  45679999999999889999999999999999999  


Q ss_pred             HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                       +++|.++|+++|++|++|++|+...    ....+...   +..+++.|++|.++.  .++|++++++
T Consensus       158 -~~~i~~~~~~~~~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~~~--~g~g~~~~~~  215 (373)
T cd06453         158 -VKEIGEIAHEAGVPVLVDGAQSAGH----MPVDVQDL---GCDFLAFSGHKMLGP--TGIGVLYGKE  215 (373)
T ss_pred             -HHHHHHHHHHcCCEEEEEhhhhcCc----eeeecccc---CCCEEEeccccccCC--CCcEEEEEch
Confidence             8899999999999999999997522    11122222   223777899999765  5689988854

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.86  E-value=3.5e-20  Score=170.19  Aligned_cols=194  Identities=18%  Similarity=0.159  Sum_probs=148.6

Q ss_pred             CCCcHHHHHHHHHHHhcCC----CCCCCC----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc
Q 021547           61 FRTAAVAEDAIVDSVRSSM----FNCYAP----MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR  132 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~----~~~Y~~----~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~  132 (311)
                      +++|+.+.+++.+.+....    ...|..    ..+..++|+.++++++.    . ..++|++|+|+++++..++.++++
T Consensus        10 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~-~~~~v~~~~g~t~al~~~~~~~~~   84 (376)
T TIGR01977        10 YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNA----P-SSAHVVFTNNATTALNIALKGLLK   84 (376)
T ss_pred             CCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCc----C-CCCeEEEeCCHHHHHHHHHHhccC
Confidence            5778899999988876432    112322    24567888888888842    1 335899999999999999999989


Q ss_pred             CCCCEEEecCCCCcchH----HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHH
Q 021547          133 LGAANILLPRPGWPFYE----SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQK  208 (311)
Q Consensus       133 ~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~  208 (311)
                      +| |+|+++.+.|..+.    ..++..|.+++.++..  .++.+|++++++.++++++++++++|+||||..++   +++
T Consensus        85 ~g-d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~---~~~  158 (376)
T TIGR01977        85 EG-DHVITTPMEHNSVARPLECLKEQIGVEITIVKCD--NEGLISPERIKRAIKTNTKLIVVSHASNVTGTILP---IEE  158 (376)
T ss_pred             CC-CEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCC---HHH
Confidence            99 99999999998754    3556669999988764  34678999999999889999999999999999999   788


Q ss_pred             HHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          209 IAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       209 l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      |.++|+++|+++|+|++++...    ....+..   .+..+++.|++|+++.|. .+|.+++.+.
T Consensus       159 i~~l~~~~~~~livD~a~~~g~----~~~~~~~---~~~D~~~~s~~K~l~~p~-g~g~l~~~~~  215 (376)
T TIGR01977       159 IGELAQENGIFFILDAAQTAGV----IPIDMTE---LAIDMLAFTGHKGLLGPQ-GTGGLYIREG  215 (376)
T ss_pred             HHHHHHHcCCEEEEEhhhccCc----cCCCchh---cCCCEEEecccccccCCC-CceEEEEcCC
Confidence            9999999999999999998522    1112221   223488999999876553 3566666554

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.86  E-value=6.3e-20  Score=168.66  Aligned_cols=247  Identities=17%  Similarity=0.153  Sum_probs=172.8

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.++||..|.-..+.+. .+|.+.+++.++++...  ... .....+++..+++++.+..+    .+.+++++++++
T Consensus        26 ~~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~--~~~-~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~   97 (377)
T PRK02936         26 NNGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIW--HVS-NLFTNSLQEEVASLLAENSA----GDLVFFCNSGAE   97 (377)
T ss_pred             CCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcc--ccc-cccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHH
Confidence            35889999998864333344 77899999999987432  122 23456889999999987543    257999999999


Q ss_pred             HHHHHHHHHh-cCCCCEEEecCCCCcchH-HHHHHcCcEEE---EeeccCCCCc--ccCHHHHHhhcCCCccEEEEeCCC
Q 021547          122 AVEIILTVIT-RLGAANILLPRPGWPFYE-SFAKRNHIEVR---HFDLLPERGW--EVDLEAVEALADENTAAIVIINPC  194 (311)
Q Consensus       122 a~~~~~~~l~-~~g~d~Vl~~~p~~~~~~-~~~~~~g~~~~---~~~~~~~~~~--~~d~~~l~~~l~~~~~~i~i~~p~  194 (311)
                      |+..+++... -+|.++|++.++.|++.. ......+....   ..+..+...+  ..|++.+++.+.++++++++..++
T Consensus        98 a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~  177 (377)
T PRK02936         98 ANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQ  177 (377)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEeccc
Confidence            9999998643 245367999988887543 22222222110   0111100000  117899999888888888988889


Q ss_pred             CCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          195 NPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       195 nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      +++|.. .+++.+++|.++|++||+++|+||+|.++.+.|..+ .+..+...+++   .++||.++ +|+|+||++++. 
T Consensus       178 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-~~~~~~~~~di---~t~sK~l~-~G~~ig~v~~~~-  251 (377)
T PRK02936        178 GEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-AYEQFGLDPDI---VTVAKGLG-NGIPVGAMIGKK-  251 (377)
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhhCCCCcE---EEEccccc-CCCccEEEEEcH-
Confidence            999886 578999999999999999999999999877666432 22223222233   37999988 899999998753 


Q ss_pred             CCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          274 NGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       274 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                             ++++.+... ...+.+.++++|+++.+.|+
T Consensus       252 -------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~  281 (377)
T PRK02936        252 -------ELGTAFGPGSHGSTFGGNPLAMAAAKEVLQ  281 (377)
T ss_pred             -------HHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence                   366766544 33456789999999988875

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.86  E-value=1.1e-19  Score=165.85  Aligned_cols=197  Identities=18%  Similarity=0.159  Sum_probs=151.6

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +-+++||-+.--..+ ....+++++.++|.+...     .|.   +..++++++.+++.+.+|    .+++++|+|+++|
T Consensus         6 ~~~~~ina~g~~t~~-g~s~~~~~v~~a~~~~~~-----~~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~a   72 (363)
T TIGR01437         6 GLKKVINASGKMTIL-GVSTVSDEVADAQKRGAQ-----NYF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAG   72 (363)
T ss_pred             CCceEEECCcEeecC-CCCCCCHHHHHHHHHHHh-----cCC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHH
Confidence            457778776543211 234578999999999864     243   356777777777777655    3478999999999


Q ss_pred             HHHHHHHHhcCCCC---------------EEEecCCCCcch----HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC
Q 021547          123 VEIILTVITRLGAA---------------NILLPRPGWPFY----ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE  183 (311)
Q Consensus       123 ~~~~~~~l~~~g~d---------------~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~  183 (311)
                      +.+++.+++++| |               +|+++.|.|..|    ...+...|.+++.++.    ++.+|++++++++++
T Consensus        73 l~~al~al~~~G-d~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~ai~~  147 (363)
T TIGR01437        73 IAQSVAAVITRG-NRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAAITE  147 (363)
T ss_pred             HHHHHHHHhcCC-CcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHhcCh
Confidence            999999999998 8               999999888766    5677889999998875    245899999999999


Q ss_pred             CccEEE-EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547          184 NTAAIV-IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG  262 (311)
Q Consensus       184 ~~~~i~-i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G  262 (311)
                      ++++++ +++|+||+|...+   +++|.++|++||+++|+|++|+.      ....+..+.   ..+++.|+||.+  .|
T Consensus       148 ~t~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~------~~~~~~~~g---~D~~~~S~~K~l--~g  213 (363)
T TIGR01437       148 KTAAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEE------DLQKYYRLG---ADLVIYSGAKAI--EG  213 (363)
T ss_pred             hceEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCC------chHHHHHcC---CCEEEEeCCccc--CC
Confidence            999776 5678999999999   78899999999999999999972      111111121   238889999974  57


Q ss_pred             ceeeEEEee
Q 021547          263 WRFGWLATN  271 (311)
Q Consensus       263 ~r~G~i~~~  271 (311)
                      ++.|+++.+
T Consensus       214 p~~G~l~~~  222 (363)
T TIGR01437       214 PTSGLVLGK  222 (363)
T ss_pred             CceEEEEEc
Confidence            789998863

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.86  E-value=5.8e-20  Score=168.21  Aligned_cols=212  Identities=15%  Similarity=0.098  Sum_probs=152.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEE
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANI  138 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~V  138 (311)
                      ++.++.+.+++..... .. ..|..  .++...|+++++++..        .+++++++|+++|+..++.+++++| |+|
T Consensus        35 ~~~~~~~~~~~~~~~~-~~-~~Y~r~~npt~~~Le~~iA~le~--------~~~~~~~~sG~~Ai~~~l~all~~G-D~V  103 (394)
T PRK09028         35 FDTVAEMRHAAKNRAN-GE-MFYGRRGTPTHFAFQAAIVELEG--------GAGTALYPSGAAAISNALLSFLKAG-DHL  103 (394)
T ss_pred             cCCHHHHHHHhccCcc-CC-ceecCCCCchHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCC-CEE
Confidence            4455555555432211 11 24655  3456799999998862        3578999999999999999999999 999


Q ss_pred             EecCCCCcchHH----HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547          139 LLPRPGWPFYES----FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETAR  214 (311)
Q Consensus       139 l~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~  214 (311)
                      ++++|.|.++..    .++..|+++..++..       +.+.+++.+++++++|++++|+||||.+.+   +++|+++|+
T Consensus       104 vv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-------~~e~l~~~l~~~TklV~lespsNPtg~v~d---l~~I~~la~  173 (394)
T PRK09028        104 LMVDSCYEPTRDLCDKILKGFGIETTYYDPM-------IGEGIRELIRPNTKVLFLESPGSITMEVQD---VPTLSRIAH  173 (394)
T ss_pred             EEECCCcHHHHHHHHHhhhhcceEEEEECCC-------CHHHHHHhcCcCceEEEEECCCCCCCcHHH---HHHHHHHHH
Confidence            999999987764    335577777766431       557899999999999999999999988755   999999999


Q ss_pred             HhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh-hcc
Q 021547          215 KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC-LGV  292 (311)
Q Consensus       215 ~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~  292 (311)
                      ++|+++++|++|+...    ...++.    .+-.|++.|.+|+++.+| +..|+++ .++       ++.++++.. ...
T Consensus       174 ~~g~~lvvD~t~a~p~----~~~Pl~----~GaDivv~S~tK~l~Gh~d~~~G~~~-~~~-------~~~~~l~~~~~~~  237 (394)
T PRK09028        174 EHDIVVMLDNTWASPI----NSRPFE----MGVDISIQAATKYIVGHSDVMLGTAT-ANE-------KHWDQLREHSYLM  237 (394)
T ss_pred             HcCCEEEEECCccccc----cCCccc----cCceEEEEeCCeEecCCCCEEEEEEE-CCH-------HHHHHHHHHHHhc
Confidence            9999999999998522    122221    223499999999997774 6667654 332       245555543 224


Q ss_pred             ccCCCchhHHHHHhhhh
Q 021547          293 RSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       293 ~~~~~~~~q~~~~~~l~  309 (311)
                      ..+.+++..+.+.+-|+
T Consensus       238 G~~~~p~~a~l~~rgl~  254 (394)
T PRK09028        238 GQCTSPDDVYLAMRGLR  254 (394)
T ss_pred             CCCCCHHHHHHHHcccC
Confidence            56778887776665543

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.86  E-value=4.8e-20  Score=171.40  Aligned_cols=247  Identities=21%  Similarity=0.171  Sum_probs=166.7

Q ss_pred             CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      ++..+|||..|....  .++ .+|.+.+++.+.+...  ..|....+..+....+++.+.+.++.  ..+++++++|+++
T Consensus        34 dG~~~id~~~~~~~~--~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~sgse  107 (413)
T cd00610          34 DGNRYLDFLSGIGVL--NLGHNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTPE--GLDKVFFVNSGTE  107 (413)
T ss_pred             CCCEEEEcCccHHhh--ccCCCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCCC--CCCEEEEcCcHHH
Confidence            588999999873321  133 7889999999998643  24444323455666666666665543  5689999999999


Q ss_pred             HHHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcC-------------cEEEEeeccCC----CCcccCHHHHHhhcC
Q 021547          122 AVEIILTVIT--RLGAANILLPRPGWPFYESFAKRNH-------------IEVRHFDLLPE----RGWEVDLEAVEALAD  182 (311)
Q Consensus       122 a~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~----~~~~~d~~~l~~~l~  182 (311)
                      |+..+++.+.  .++ ++|++.++.|.++........             .+++.++....    ..+..|++.|++.++
T Consensus       108 a~~~al~~~~~~~~~-~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~  186 (413)
T cd00610         108 AVEAALKLARAYTGR-KKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALE  186 (413)
T ss_pred             HHHHHHHHHHHHcCC-CeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHh
Confidence            9999999885  456 999999999988654433322             12344443210    124458889998876


Q ss_pred             C--CccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC
Q 021547          183 E--NTAAIVIINP-CNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW  258 (311)
Q Consensus       183 ~--~~~~i~i~~p-~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~  258 (311)
                      .  +...++++.| ++++|..+ +.+.+++|.++|++||+++|+||+|.++...+.. .....+....+   +.|+||.+
T Consensus       187 ~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~-~~~~~~~~~~d---~~t~sK~l  262 (413)
T cd00610         187 EHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKM-FAFEHFGVEPD---IVTLGKGL  262 (413)
T ss_pred             cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch-hhHhhcCCCCC---eEEEcccc
Confidence            5  3344455555 67779876 6777999999999999999999999976444432 11222221222   34889998


Q ss_pred             CCCcceeeEEEeeCCCCccchhhHHHHH--hhh-hccccCCCchhHHHHHhhhh
Q 021547          259 IVPGWRFGWLATNDPNGVLQKSGIVGSI--KAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       259 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +. |+|+||++++.        ++++.+  ... ...+.+.++++|+++.+.|+
T Consensus       263 ~~-g~~~g~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~  307 (413)
T cd00610         263 GG-GLPLGAVLGRE--------EIMDAFPAGPGLHGGTFGGNPLACAAALAVLE  307 (413)
T ss_pred             cC-ccccEEEEEcH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            76 89999998742        366764  333 23456788888888876653

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.85  E-value=1.4e-19  Score=167.93  Aligned_cols=232  Identities=14%  Similarity=0.124  Sum_probs=161.4

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN------CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      ++++++|+.++   |.++..+|++++++.++++.....      .+....-..++++.+++++.        .+..++++
T Consensus        44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~~  112 (406)
T PRK13393         44 PREVTVWCSND---YLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG--------KEAALLFT  112 (406)
T ss_pred             CccEEEeeccc---ccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC--------CCcEEEeC
Confidence            46899999998   457788999999999998743210      01111134567777777772        24556655


Q ss_pred             ChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEe
Q 021547          118 GCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVII  191 (311)
Q Consensus       118 g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~  191 (311)
                      ++++++..++.++..  +| |.|++....|..+...+...|.+++.++.       .|++.+++.++    +++++++++
T Consensus       113 SG~~An~~ai~~l~~~~~g-~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~  184 (406)
T PRK13393        113 SGYVSNWAALSTLGSRLPG-CVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFE  184 (406)
T ss_pred             CcHHHHHHHHHHhhcCCCC-CEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEc
Confidence            566789999987765  67 88888888888888888888887766653       25666666553    356788899


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      +++|++|.+.+   +++|.++|+++|+++|+||+|+...++  |........+. ....|+++||||.|+++|   ||++
T Consensus       185 ~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~-~~~~i~~~tlsKa~g~~G---G~~~  257 (406)
T PRK13393        185 SVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLA-DRLTIIEGTLAKAFGVMG---GYIT  257 (406)
T ss_pred             CCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCC-CCCeEEEEeCchhhcccC---ceee
Confidence            99999999999   999999999999999999999843333  22111111111 123588899999999988   9987


Q ss_pred             eeCCCCccchhhHHHHHhhhhc---cccCCCchhHHHHHhhhh
Q 021547          270 TNDPNGVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l~  309 (311)
                      ++.        ++++.++....   ++.+.++.+++++.+.|+
T Consensus       258 ~~~--------~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~  292 (406)
T PRK13393        258 GSA--------ALCDFIRSFASGFIFTTSLPPAVAAGALASVR  292 (406)
T ss_pred             CCH--------HHHHHHHHhCcCceecCccCHHHHHHHHHHHH
Confidence            642        36666665532   234556666776666554

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.85  E-value=7.6e-20  Score=169.51  Aligned_cols=239  Identities=18%  Similarity=0.170  Sum_probs=158.6

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.++||..|.-..+.+. .+|.+.+++.+.+....  .+... ...+....+++.+.+..    ..+.++++++|++
T Consensus        37 ~dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~--~~~~~-~~~~~~~~l~~~l~~~~----~~~~~~~~~sGse  108 (403)
T PRK05093         37 QQGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLW--HISNV-FTNEPALRLAKKLIDAT----FAERVFFANSGAE  108 (403)
T ss_pred             CCCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcC--cccCc-cCCHHHHHHHHHHHhhC----CCCEEEEeCchHH
Confidence            35788999987722222234 78999999999886421  11111 11122334455554422    2368999999999


Q ss_pred             HHHHHHHHHhc-------CCCCEEEecCCCCcchHHHH-HHcCc------------EEEEeeccCCCCcccCHHHHHhhc
Q 021547          122 AVEIILTVITR-------LGAANILLPRPGWPFYESFA-KRNHI------------EVRHFDLLPERGWEVDLEAVEALA  181 (311)
Q Consensus       122 a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~-~~~g~------------~~~~~~~~~~~~~~~d~~~l~~~l  181 (311)
                      |+..+++....       .+.++|+..+..|.+....+ ...+.            +++.++.       -|++.+++.+
T Consensus       109 A~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l  181 (403)
T PRK05093        109 ANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAVI  181 (403)
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHHh
Confidence            99999986632       23367888887777643322 21111            1122211       2789999988


Q ss_pred             CCCccEEEEeCCCCCCccCC--CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCC
Q 021547          182 DENTAAIVIINPCNPCGNVL--TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI  259 (311)
Q Consensus       182 ~~~~~~i~i~~p~nptG~~~--~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~  259 (311)
                      .++++++++. |.||+|-.+  +.+.+++|.++|++||+++|+||+|.++.++|.. .+...+...+.   +.||||.++
T Consensus       182 ~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~~~~~~~~~pd---i~s~sK~l~  256 (403)
T PRK05093        182 DDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDL-FAYMHYGVTPD---ILTSAKALG  256 (403)
T ss_pred             cCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc-hhhhhcCCCCC---EEEeccccc
Confidence            7777777777 777777654  8899999999999999999999999988777653 22222222222   459999987


Q ss_pred             CCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          260 VPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       260 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                       +|+|+||++++.        ++++.+... ...+++.+++.|+++.+.|+
T Consensus       257 -~G~rig~vv~~~--------~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~  298 (403)
T PRK05093        257 -GGFPIGAMLTTA--------EIASHFKVGTHGSTYGGNPLACAVAEAVFD  298 (403)
T ss_pred             -CCcceEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHHH
Confidence             899999999864        477777653 44456789999999888553

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.85  E-value=3e-19  Score=164.49  Aligned_cols=228  Identities=15%  Similarity=0.073  Sum_probs=158.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCC-----CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh----
Q 021547           61 FRTAAVAEDAIVDSVRSSMF-----NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT----  131 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~-----~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~----  131 (311)
                      .++++.+.+++.+.+.....     +.|+ ..+...+++++++++.. .+. .++++|++|+|+++++..++.++.    
T Consensus         9 ~~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~   85 (382)
T TIGR03403         9 TMLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEI   85 (382)
T ss_pred             CCCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhc
Confidence            45678899999887753211     1222 23556788888888753 221 257899999999999999998763    


Q ss_pred             -cCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHH
Q 021547          132 -RLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQ  207 (311)
Q Consensus       132 -~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~  207 (311)
                       +++.++|++....|+.+..   .++..|.+++.++++  .++.+|++.+++.++++++++++++|+||||..++   ++
T Consensus        86 ~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~--~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~  160 (382)
T TIGR03403        86 LKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPIN--EQGTITAEQVREAITEKTALVSVMWANNETGMIFP---IK  160 (382)
T ss_pred             ccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecC--CCCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HH
Confidence             4532789999877776543   456789999999875  34578999999999989999999999999999999   78


Q ss_pred             HHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH--HH
Q 021547          208 KIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV--GS  285 (311)
Q Consensus       208 ~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~--~~  285 (311)
                      +|.++|+++|+++++|+++...    .-+..+...   +..+++.|++|.+|.+|  +|++.+.... .+. +.+.  ..
T Consensus       161 ~I~~la~~~g~~~ivD~a~~~g----~~~~~~~~~---~~D~~~~s~~K~~gp~G--~g~l~vr~~~-~~~-p~~~g~~~  229 (382)
T TIGR03403       161 EIGEICKERGVLFHTDAVQAIG----KIPVDVQKA---GVDFLSFSAHKFHGPKG--VGGLYIRKGV-ELT-PLFHGGEH  229 (382)
T ss_pred             HHHHHHHHcCCEEEEechhhcC----CCccCcccc---CCCEEEEcchhhCCCCc--eEEEEECCCC-CCC-CcccCCCC
Confidence            8999999999999999998742    111222221   22388899999887777  5777665432 111 1111  11


Q ss_pred             HhhhhccccCCCchhHHHHHhhhh
Q 021547          286 IKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       286 ~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +...  ..+.++.++++++++.++
T Consensus       230 ~~~~--~~gt~~~~~~~al~~al~  251 (382)
T TIGR03403       230 MGGR--RSGTLNVPYIVAMGEAMR  251 (382)
T ss_pred             CCCc--ccCCcChHHHHHHHHHHH
Confidence            1111  134567777766666553

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.85  E-value=1e-19  Score=167.72  Aligned_cols=228  Identities=13%  Similarity=0.139  Sum_probs=156.0

Q ss_pred             eecCCCCCCCCCCCCCcHHHHHHHHHHHhc-------CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRS-------SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~-------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      +||+..+   |.++..+|.+++++.++++.       ... .|+...+..+|++++++++..       .+.+++++|.+
T Consensus         1 ~~f~s~d---yLgl~~~~~~~~~~~~a~~~~g~~~~~sr~-~yg~~~~~~~LE~~lA~~~g~-------e~al~~~sG~~   69 (392)
T PLN03227          1 LNFATHD---FLSTSSSPTLRQTALESLSHYGCGSCGPRG-FYGTIDAHLELEQCMAEFLGT-------ESAILYSDGAS   69 (392)
T ss_pred             CCCcCcC---ccCCCCCHHHHHHHHHHHHHhCCCCccccc-ccCChHHHHHHHHHHHHHhCC-------CcEEEecCcHH
Confidence            4788887   45788999999999999864       222 377666889999999999942       24566666655


Q ss_pred             HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-----------CCccEEE
Q 021547          121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-----------ENTAAIV  189 (311)
Q Consensus       121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-----------~~~~~i~  189 (311)
                      . ...++.+++++| |.|+++.+.|.++...+...+.+++.++..+.    -+++.+.+.+.           +++++|+
T Consensus        70 a-~~~~i~~l~~~G-D~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi  143 (392)
T PLN03227         70 T-TSSTVAAFAKRG-DLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLV  143 (392)
T ss_pred             H-HHHHHHHhCCCC-CEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEE
Confidence            4 447777889999 99999999999998887888888777754211    12333332332           3577888


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC-CCccccc--C-CCCCeEEEecCcccCCCCccee
Q 021547          190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP-YIPMGVF--G-SIVPVITLGSISKRWIVPGWRF  265 (311)
Q Consensus       190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~-~~~~~~~--~-~~~~~i~i~s~sK~~~~~G~r~  265 (311)
                      +.++.||+|.+.+   ++++.++|++||+++|+||+|+ +...|.. ......+  . ..+..|++.|+||.++..|   
T Consensus       144 ~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~-~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~g---  216 (392)
T PLN03227        144 VEGLYKNTGTLAP---LKELVALKEEFHYRLILDESFS-FGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVG---  216 (392)
T ss_pred             EcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECccc-ccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccC---
Confidence            8899999999999   8899999999999999999998 3322211 0111111  1 1233688999999876444   


Q ss_pred             eEEEeeCCCCccchhhHHHHHhhh-hc--cccCCCchhHHHHHhh
Q 021547          266 GWLATNDPNGVLQKSGIVGSIKAC-LG--VRSGPSTLIQVCEMFL  307 (311)
Q Consensus       266 G~i~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~q~~~~~~  307 (311)
                      |+++++.        ++++.++.. ..  ++.+.+++.++++...
T Consensus       217 g~v~~~~--------~~~~~~~~~~~~~~~~~~~~p~~~~aa~~a  253 (392)
T PLN03227        217 GMTVGSE--------EVVDHQRLSGSGYCFSASAPPFLAKADATA  253 (392)
T ss_pred             cEEecCH--------HHHHHHHHhCcCccccCCCCHHHHHHHHHH
Confidence            8887642        356555433 22  2233346555555543

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.85  E-value=4.8e-19  Score=162.62  Aligned_cols=217  Identities=25%  Similarity=0.279  Sum_probs=168.7

Q ss_pred             hHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCC--CCCC----CCCcHHHHHHHHH
Q 021547           27 AFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFN--CYAP----MFGLPLARRAVAE   98 (311)
Q Consensus        27 ~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~--~Y~~----~~g~~~lr~~ia~   98 (311)
                      .+|+.+..+.+..    +.+++.|+.+.     ..+.|..+.+++.+.....  ..+  .|..    ..-+++.|+.+++
T Consensus         7 ~~r~~fp~l~~~~----~~~~vylD~aa-----~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~   77 (405)
T COG0520           7 AVRADFPALKREV----GKPLVYLDNAA-----TSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVAR   77 (405)
T ss_pred             HHHhhCHHHhhcc----CCCeEEecCcc-----cccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHH
Confidence            3666666654442    56788888876     2346889999999876421  111  1211    1245678999999


Q ss_pred             HHhhcCCCCCC-CCCEEEeCChHHHHHHHHHHH---hcCCCCEEEecCCCCcc----hHHHHHHcCcEEEEeeccCCCCc
Q 021547           99 YLNRDLPYKLS-ADDIYITLGCMEAVEIILTVI---TRLGAANILLPRPGWPF----YESFAKRNHIEVRHFDLLPERGW  170 (311)
Q Consensus        99 ~l~~~~g~~~~-~~~v~~t~g~~~a~~~~~~~l---~~~g~d~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~  170 (311)
                      +++.      + .++|++|.|+|++++.+..++   ..+| |+|++....|++    +....+..|++++.+++.  +++
T Consensus        78 ~~~a------~~~~eIvft~~tT~aln~va~~l~~~~~~g-deIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g  148 (405)
T COG0520          78 FLNA------DSSDEIVFTRGTTEALNLVARGLGRSLKPG-DEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDG  148 (405)
T ss_pred             HhCC------CCCCeEEEeCChhHHHHHHHHHhhhhhcCC-CEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCC
Confidence            9954      5 589999999999999999999   5899 999999999874    567777889999999976  566


Q ss_pred             ccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547          171 EVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT  250 (311)
Q Consensus       171 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  250 (311)
                      .++++.++..++++|+++.+++.+|.||.+.|   +++|+++|+++|+++++|.+++.    ++-+..+..++.   .++
T Consensus       149 ~~~~~~~~~~i~~~Tklvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~---Df~  218 (405)
T COG0520         149 LLDLDALEKLITPKTKLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGC---DFL  218 (405)
T ss_pred             CcCHHHHHHhcCCCceEEEEECccccccccch---HHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCC---CEE
Confidence            89999999999999999999999999999999   99999999999999999999986    333344444443   399


Q ss_pred             EecCcccCCCCcceeeEEEeeC
Q 021547          251 LGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      +.|.+|+++.| ..+|.+.+..
T Consensus       219 afsgHKwl~gP-~GiGvLy~r~  239 (405)
T COG0520         219 AFSGHKWLLGP-TGIGVLYVRK  239 (405)
T ss_pred             EEcccccccCC-CceEEEEEch
Confidence            99999965666 3467777653

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.84  E-value=1.9e-19  Score=164.82  Aligned_cols=195  Identities=17%  Similarity=0.255  Sum_probs=147.0

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecC
Q 021547           64 AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPR  142 (311)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~  142 (311)
                      .+...+++.+.+.++..  +..    .++++.+.+++.+.+    ..+++++|+|+++++.+++.++ .++| |+|+++.
T Consensus        10 ~~~e~~a~~~~~~~~~~--~~~----g~~~~~~e~~la~~~----g~~~~v~~~sgt~aL~~~l~al~~~pG-d~Viv~~   78 (376)
T TIGR02379        10 TGQELEYIAEAISEGKL--SGD----GPFSRRCETWLENRT----GTKKALLTPSCTAALEMAALLLDIQPG-DEVIMPS   78 (376)
T ss_pred             CHHHHHHHHHHHHcCCc--cCC----cHHHHHHHHHHHHHh----CCCeEEEeCCHHHHHHHHHHHcCCCCc-CEEEECC
Confidence            45567888888876543  211    234555555555433    3468999999999999999888 7899 9999999


Q ss_pred             CCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547          143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA  222 (311)
Q Consensus       143 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~  222 (311)
                      ++|..+...+...|++++.+++++ +++.+|++.+++.+++++++|+   |+||+|...+   +++|.++|+++|++||+
T Consensus        79 ~t~~~~~~~~~~~G~~~v~vd~d~-~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIe  151 (376)
T TIGR02379        79 YTFVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANKHQLFVIE  151 (376)
T ss_pred             CCcHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEE
Confidence            999999999999999999999854 4578999999999998899886   5678999888   88999999999999999


Q ss_pred             eccccCCc-cCCCCCCcccccCCCCCeEEEecC--cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc
Q 021547          223 DEVYGHLA-FGSTPYIPMGVFGSIVPVITLGSI--SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG  291 (311)
Q Consensus       223 D~ay~~~~-~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  291 (311)
                      |++|+... +++.+..++.       .+.+.||  +|.+ .+|.+.|+++++++       ++.++++.+..
T Consensus       152 Daa~~~g~~~~~~~~g~~~-------~~~~fSf~~~K~l-~~g~~gG~v~~~~~-------~~~~~~~~~~~  208 (376)
T TIGR02379       152 DAAQGVMSTYKGRALGSIG-------HLGTFSFHETKNY-TSGGEGGALLINDQ-------AFIERAEIIRE  208 (376)
T ss_pred             ECccccCCccCCcccCCCC-------CEEEEeCCCCCcC-cccCCceEEEECCH-------HHHHHHHHHHH
Confidence            99998754 5554332221       1333343  3764 56778899998764       36777666543

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.84  E-value=1.3e-19  Score=167.70  Aligned_cols=193  Identities=15%  Similarity=0.097  Sum_probs=145.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL  140 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~  140 (311)
                      ...++.++++|....    . +|. ..+..++++.+.+.+.+.+|.+ ..+.+++++++++++..++..+.++| |+|++
T Consensus        18 ~~~~~~V~~a~~~~~----~-~~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~G-d~Vlv   89 (401)
T PLN02409         18 VNIPERVLRAMNRPN----E-DHR-SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPG-DKVVS   89 (401)
T ss_pred             CCCCHHHHHHhcCCC----C-CCC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCC-CEEEE
Confidence            356778888775432    1 222 3467888888888888877753 23467888999999999999999999 99999


Q ss_pred             cCCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC----CccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547          141 PRPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----NTAAIVIINPCNPCGNVLTYQHLQKIAETAR  214 (311)
Q Consensus       141 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~  214 (311)
                      ..+.|.+.  ...++..|.+++.++...  +..++++++++.+++    ++++++++++.||||.++|.+++.++++ |+
T Consensus        90 ~~~~~~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~  166 (401)
T PLN02409         90 FRIGQFSLLWIDQMQRLNFDVDVVESPW--GQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CA  166 (401)
T ss_pred             eCCCchhHHHHHHHHHcCCceEEEECCC--CCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hh
Confidence            99998765  467788999999998643  234789999998875    7899999999999999999555544444 99


Q ss_pred             HhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          215 KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       215 ~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      ++|+++|+|++++.    |..+..+..+   +..+++.|.+|++++|. ++||++++.
T Consensus       167 ~~g~~~vvD~v~s~----g~~~id~~~~---~~D~~~~s~~K~l~~P~-G~G~l~~~~  216 (401)
T PLN02409        167 QHPALLLVDGVSSI----GALDFRMDEW---GVDVALTGSQKALSLPT-GLGIVCASP  216 (401)
T ss_pred             ccCcEEEEEccccc----CCcccccccc---CccEEEEcCccccCcCC-CcceeEECH
Confidence            99999999999884    2222222222   22378888899986653 699999854

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.84  E-value=2e-19  Score=165.27  Aligned_cols=191  Identities=17%  Similarity=0.142  Sum_probs=148.1

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecCC
Q 021547           65 AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPRP  143 (311)
Q Consensus        65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~p  143 (311)
                      +.-.+++.+.+.++.. .+  .+...+|+++++++++        .+++++++|+++|+.+++.++ +++| |+|+++.+
T Consensus        14 ~~e~~~~~~~l~~~~~-~~--g~~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~~~G-d~Viv~~~   81 (379)
T PRK11658         14 DEELAAVKEVLRSGWI-TT--GPKNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGIGPG-DEVITPSL   81 (379)
T ss_pred             HHHHHHHHHHHHcCCc-cC--CHhHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCC-CEEEECCC
Confidence            5557788888776533 22  3468899999999994        246888999999999999999 7899 99999999


Q ss_pred             CCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547          144 GWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD  223 (311)
Q Consensus       144 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D  223 (311)
                      +|..+...+...|++++.+++++ +++.+|++.+++.+++++++++   |.|++|...+   +++|.++|+++|++||+|
T Consensus        82 ~~~~~~~~~~~~G~~~v~vd~~~-~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D  154 (379)
T PRK11658         82 TWVSTLNMIVLLGATPVMVDVDR-DTLMVTPEAIEAAITPRTKAII---PVHYAGAPAD---LDAIRAIGERYGIPVIED  154 (379)
T ss_pred             cHHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEE
Confidence            99999999999999999998753 4567899999999998899877   5567899887   889999999999999999


Q ss_pred             ccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547          224 EVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       224 ~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      ++|+. ..+.+...   ..   .+  +.+.||++...+++.+.|+++..++       ++.++++..
T Consensus       155 ~a~a~g~~~~~~~~---g~---~g--~~~~Sf~~~K~l~~g~GG~v~~~~~-------~~~~~~~~~  206 (379)
T PRK11658        155 AAHAVGTYYKGRHI---GA---RG--TAIFSFHAIKNITCAEGGLVVTDDD-------ELADRLRSL  206 (379)
T ss_pred             CCCccCCeECCeec---CC---CC--CEEEeCCCCCcCcccCceEEEECCH-------HHHHHHHHH
Confidence            99984 44444321   11   11  2345666555567778898887654       366666654

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.84  E-value=5.8e-20  Score=163.20  Aligned_cols=167  Identities=18%  Similarity=0.147  Sum_probs=132.7

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE  167 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~  167 (311)
                      -+.++++.++++++.       .+.+++++|+++++.+++.+++++| |+|+++.++|.++...+...|.+++.++....
T Consensus        60 ~i~~~~~~~A~~~ga-------~~~~~~~~Gst~a~~~~l~al~~~g-d~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~  131 (294)
T cd00615          60 PIKEAQELAARAFGA-------KHTFFLVNGTSSSNKAVILAVCGPG-DKILIDRNCHKSVINGLVLSGAVPVYLKPERN  131 (294)
T ss_pred             HHHHHHHHHHHHhCC-------CCEEEEcCcHHHHHHHHHHHcCCCC-CEEEEeCCchHHHHHHHHHCCCEEEEecCccC
Confidence            367889999998842       2344559999999999999999999 99999999999999999999999998876543


Q ss_pred             CC----cccCHHHHHhhcC--CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC-CccCCCCCCccc
Q 021547          168 RG----WEVDLEAVEALAD--ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH-LAFGSTPYIPMG  240 (311)
Q Consensus       168 ~~----~~~d~~~l~~~l~--~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~  240 (311)
                      .+    ..+|++.+++.++  ++++++++++| |++|.+++   +++|+++|+++|+++|+|++|+. +.|.+..+... 
T Consensus       132 ~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~-  206 (294)
T cd00615         132 PYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSA-  206 (294)
T ss_pred             cccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcch-
Confidence            33    3689999999885  46889999998 78999998   89999999999999999999975 34433211111 


Q ss_pred             ccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          241 VFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       241 ~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                        ...+..+++.|++|+  ++|++.|+++..
T Consensus       207 --~~~~~div~~S~hK~--l~g~~~~~~l~~  233 (294)
T cd00615         207 --AMAGADIVVQSTHKT--LPALTQGSMIHV  233 (294)
T ss_pred             --hhcCCcEEEEchhcc--cchHhHHHHHHh
Confidence              123456999999997  578887665543

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.84  E-value=2.3e-19  Score=162.05  Aligned_cols=214  Identities=19%  Similarity=0.190  Sum_probs=168.5

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF------NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      ++++++||+.+|   |.++..+|.+++++.+.++....      .-++...-+.+|++.+|+|+        ..+..++.
T Consensus        37 ~~~~~~nf~SNd---YLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~--------g~e~al~f  105 (388)
T COG0156          37 DGRKVLNFCSND---YLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL--------GAEAALLF  105 (388)
T ss_pred             CCceeEeeeccC---cccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh--------CCCcEEEE
Confidence            368899999999   56889999999999998874210      01334445678999999999        34567776


Q ss_pred             CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEE
Q 021547          117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVI  190 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i  190 (311)
                      +++-.|+..++.+|++++ |.|+...-.|.+....++..+.+.+.+..       .|++.||+.+++      +.+.|+.
T Consensus       106 ~SGy~AN~~~i~~l~~~~-dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~Ivt  177 (388)
T COG0156         106 SSGFVANLGLLSALLKKG-DLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVT  177 (388)
T ss_pred             cccchhHHHHHHHhcCCC-cEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEE
Confidence            777889999999999999 99999999999999999999999998865       388999998865      2455666


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc--cCCCCCeEEEecCcccCCCCcceeeEE
Q 021547          191 INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV--FGSIVPVITLGSISKRWIVPGWRFGWL  268 (311)
Q Consensus       191 ~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~--~~~~~~~i~i~s~sK~~~~~G~r~G~i  268 (311)
                      ...-...|.+.|   |++|++++++|+.++++||+|+.-+++....-....  +......|.++||||+||..|   ||+
T Consensus       178 egVfSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v  251 (388)
T COG0156         178 EGVFSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYI  251 (388)
T ss_pred             eccccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---cee
Confidence            677889999998   999999999999999999999987776332222222  233445799999999999999   999


Q ss_pred             EeeCCCCccchhhHHHHHhhh
Q 021547          269 ATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      .++.        .+++.++..
T Consensus       252 ~g~~--------~~~d~L~~~  264 (388)
T COG0156         252 AGSA--------ALIDYLRNR  264 (388)
T ss_pred             eCcH--------HHHHHHHHh
Confidence            8754        356665554

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.84  E-value=4e-19  Score=164.68  Aligned_cols=200  Identities=18%  Similarity=0.142  Sum_probs=149.8

Q ss_pred             eecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC--CC------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCY--AP------MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y--~~------~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      +.|+.+.+     .+.++.+.+++.+.+........  ..      ...+.++|+.+++++      +.++++|++|+|+
T Consensus         5 ~yld~aa~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~   73 (402)
T TIGR02006         5 IYLDYAAT-----TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI------GADSREIVFTSGA   73 (402)
T ss_pred             EEeeCCcC-----CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCH
Confidence            67777763     36788999999887642211111  11      123456677788877      3467899999999


Q ss_pred             HHHHHHHHHHHh----cCCCCEEEecCCCCcchHHH---HHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC
Q 021547          120 MEAVEIILTVIT----RLGAANILLPRPGWPFYESF---AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN  192 (311)
Q Consensus       120 ~~a~~~~~~~l~----~~g~d~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~  192 (311)
                      ++++..++.++.    ++| |+|++..+.|..+...   ++..|.+++.+++.  .++.+|++.+++.++++++++++++
T Consensus        74 t~a~~~~l~~l~~~~~~~g-~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~v~~  150 (402)
T TIGR02006        74 TESNNLAIKGIAHFYKSKG-NHIITSKTEHKAVLDTCRYLEREGFEVTYLPPK--SNGLIDLEELKAAIRDDTILVSIMH  150 (402)
T ss_pred             HHHHHHHHHHHHHhhcCCC-CEEEECCCccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCCEEEEEEC
Confidence            999999887764    578 9999999999876543   34569999998764  4467899999999988999999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      ++||||...+   +++|.++|+++|+++++|++++...    .+..+...   +..+++.|.+|.+|.+|  +|++++.+
T Consensus       151 ~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~----~~~~~~~~---~~D~~~~s~~K~~gp~G--~G~l~~~~  218 (402)
T TIGR02006       151 VNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGK----IPINVNEL---KVDLMSISGHKIYGPKG--IGALYVRR  218 (402)
T ss_pred             CCcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCC----cccCcccc---CCCEEEEehhhhcCCCc--eEEEEEcc
Confidence            9999999998   8899999999999999999998521    22222222   23488899999876446  78887764


Q ss_pred             C
Q 021547          273 P  273 (311)
Q Consensus       273 ~  273 (311)
                      .
T Consensus       219 ~  219 (402)
T TIGR02006       219 K  219 (402)
T ss_pred             C
Confidence            3

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.84  E-value=1.8e-19  Score=164.58  Aligned_cols=191  Identities=18%  Similarity=0.223  Sum_probs=141.0

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHc
Q 021547           80 FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRN  155 (311)
Q Consensus        80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~  155 (311)
                      +.+|+ .+...+|+++++++.        . ++.++++++++++..++.+++++| |+|+++.|.|..+...+    +..
T Consensus        45 y~ry~-~p~~~~Le~~lA~l~--------~-~~~v~~~sG~~Ai~~~l~all~~G-d~Vl~~~~~y~~~~~~~~~~l~~~  113 (366)
T PRK07582         45 YGRAS-NPTWRALEAALGELE--------G-AEALVFPSGMAAITAVLRALLRPG-DTVVVPADGYYQVRALAREYLAPL  113 (366)
T ss_pred             eECCC-CccHHHHHHHHHHHc--------C-CCEEEECCHHHHHHHHHHHhcCCC-CEEEEeCCCcHhHHHHHHHHHhcC
Confidence            33444 457899999999987        1 346666667789999999999999 99999999998876544    457


Q ss_pred             CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547          156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP  235 (311)
Q Consensus       156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~  235 (311)
                      |++++.++....      .+    .+.++++++++++|+||+|.+.+   +++|+++|+++|+++|+|++|... + +..
T Consensus       114 G~~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~-~-~~~  178 (366)
T PRK07582        114 GVTVREAPTAGM------AE----AALAGADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATP-L-GQR  178 (366)
T ss_pred             eEEEEEECCCCh------HH----HhccCceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCc-c-ccC
Confidence            888888875311      11    23357899999999999998877   999999999999999999999642 1 222


Q ss_pred             CCcccccCCCCCeEEEecCcccCCC-CcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          236 YIPMGVFGSIVPVITLGSISKRWIV-PGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       236 ~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                        ++. +.   ..++++|+||.++. +|+|+||++++++       +++++++.... ...+++++.++.+.+.|+
T Consensus       179 --p~~-~g---~Divv~S~sK~l~G~~g~~~G~v~~~~~-------~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~  241 (366)
T PRK07582        179 --PLE-LG---ADLVVASDTKALTGHSDLLLGYVAGRDP-------ELMAAVERWRLLAGAIPGPFEAWLAHRSLG  241 (366)
T ss_pred             --chh-cC---CcEEEecccccccCCCCeeEEEEEcCcH-------HHHHHHHHHHHHhCCCCCHHHHHHHHhccc
Confidence              221 21   22889999999855 6799999987543       36666665533 345677888777766654

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.84  E-value=5.2e-19  Score=164.29  Aligned_cols=160  Identities=19%  Similarity=0.158  Sum_probs=132.3

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~  162 (311)
                      +....|++.++++.        ..+..++++|+++|+.+++.+++++| |+|+++.+.|.+.    ...++..|++++.+
T Consensus        64 p~~~~Le~~lA~le--------g~~~al~~~sG~~Ai~~al~~ll~~G-D~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~v  134 (431)
T PRK08248         64 PTTDVFEKRIAALE--------GGIGALAVSSGQAAITYSILNIASAG-DEIVSSSSLYGGTYNLFAHTLPKLGITVKFV  134 (431)
T ss_pred             chHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCC-CEEEEccCchhhHHHHHHHHHHhCCEEEEEE
Confidence            34677888888888        34678899999999999999999999 9999999988753    34567799999988


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      +.       .|++.+++.+++++++|++++|+||||.+++   +++|+++|+++|+++|+|++|..-    ....++   
T Consensus       135 d~-------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~----~~~~pl---  197 (431)
T PRK08248        135 DP-------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASP----YLLRPI---  197 (431)
T ss_pred             CC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCcc----ccCChh---
Confidence            75       3889999999989999999999999999999   889999999999999999998731    111222   


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                       ..+..+++.|++|.++.+|.++|++++...
T Consensus       198 -~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~  227 (431)
T PRK08248        198 -EHGADIVVHSATKFIGGHGTSIGGVIVDSG  227 (431)
T ss_pred             -HcCCCEEEEcCccccCCCCCceEEEEEeCC
Confidence             123448999999999999999999888544

>PRK14012 cysteine desulfurase; Provisional

Probab=99.83  E-value=3.7e-19  Score=165.01  Aligned_cols=201  Identities=18%  Similarity=0.199  Sum_probs=150.0

Q ss_pred             eeecCCCCCCCCCCCCCcHHHHHHHHHHHh--cCCCCCCC--------CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVR--SSMFNCYA--------PMFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        47 ~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~--~~~~~~Y~--------~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      .|.|+.+..     .+.++.+.+++.+.+.  ....+...        ......++|+.++++++      .++++++++
T Consensus         4 ~iyld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g------~~~~~v~~~   72 (404)
T PRK14012          4 PIYLDYSAT-----TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIG------ADPREIVFT   72 (404)
T ss_pred             eEEecCcCC-----CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcC------cCcCeEEEe
Confidence            367777763     3678889999988774  21111110        01234566777877773      466789999


Q ss_pred             CChHHHHHHHHHHHh----cCCCCEEEecCCCCcchHHHH---HHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEE
Q 021547          117 LGCMEAVEIILTVIT----RLGAANILLPRPGWPFYESFA---KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIV  189 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~----~~g~d~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~  189 (311)
                      +|+++++.+++.++.    ++| |+|+++.++|+.+...+   +..|++++.++.+  .++.+|++.|++.+++++++++
T Consensus        73 ~g~t~al~~~l~~l~~~~~~~g-d~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~--~~g~~d~~~l~~~i~~~t~lv~  149 (404)
T PRK14012         73 SGATESDNLAIKGAAHFYQKKG-KHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQ--SNGIIDLEKLEAAMRDDTILVS  149 (404)
T ss_pred             CCHHHHHHHHHHHHHHhhcCCC-CEEEEecCccHHHHHHHHHHHhCCCEEEEEccC--CCCcCCHHHHHHhcCCCCEEEE
Confidence            999999999888774    688 99999999998764433   4469999998765  3567899999999999999999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      +++++||||..++   +++|.++|+++|+++|+|++++.    |..+..+....   ..+++.|++|.++ |+ ++|+++
T Consensus       150 ~~~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~----g~~~~~~~~~~---~D~~~~s~~K~~g-p~-g~G~l~  217 (404)
T PRK14012        150 IMHVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSV----GKVPIDLSKLK---VDLMSFSAHKIYG-PK-GIGALY  217 (404)
T ss_pred             EECcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhc----CCcccCcccCC---CCEEEEehhhccC-CC-ceEEEE
Confidence            9999999999998   88999999999999999999985    21222222222   2378889999754 44 689988


Q ss_pred             eeCC
Q 021547          270 TNDP  273 (311)
Q Consensus       270 ~~~~  273 (311)
                      +++.
T Consensus       218 ~~~~  221 (404)
T PRK14012        218 VRRK  221 (404)
T ss_pred             EecC
Confidence            8754

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.83  E-value=3.8e-19  Score=164.31  Aligned_cols=154  Identities=18%  Similarity=0.180  Sum_probs=124.1

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~  162 (311)
                      +....|++.++++..        .+..++++++++|+.+++.+++++| |+||++.+.|.+....    +...|+++..+
T Consensus        61 Ptv~~lE~~la~leg--------~~~av~~~SG~aAi~~al~all~~G-D~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~v  131 (432)
T PRK06702         61 PTLAAFEQKLAELEG--------GVGAVATASGQAAIMLAVLNICSSG-DHLLCSSTVYGGTFNLFGVSLRKLGIDVTFF  131 (432)
T ss_pred             cHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHhcCCC-CEEEECCCchHHHHHHHHHHHHHCCCEEEEE
Confidence            356788899998883        3468889999999999999999999 9999999999866554    68899999888


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      +.      .+|++.+++++++++++|++.+|+||++.+.+   +++|+++|+++|+++|+|++|..-.+    ..++   
T Consensus       132 d~------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~----~~pl---  195 (432)
T PRK06702        132 NP------NLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYL----CQAF---  195 (432)
T ss_pred             CC------CCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhh----CChh---
Confidence            54      36889999999999999999999999999999   99999999999999999999863110    1111   


Q ss_pred             CCCCCeEEEecCcccCCCCcceee
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFG  266 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G  266 (311)
                       ..+-.|+++|+||.++.++--+|
T Consensus       196 -~~GADIvv~S~TKy~~Ghsd~l~  218 (432)
T PRK06702        196 -EHGANIIVHSTTKYIDGHASSLG  218 (432)
T ss_pred             -hcCCCEEEEccccccCCCcceec
Confidence             12233999999995544443333

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.83  E-value=5e-19  Score=162.26  Aligned_cols=187  Identities=20%  Similarity=0.183  Sum_probs=138.2

Q ss_pred             CCCCCC--CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHc
Q 021547           82 CYAPMF--GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRN  155 (311)
Q Consensus        82 ~Y~~~~--g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~  155 (311)
                      .|....  ...++++.+++++    |    .++++++++++.++.+++. ++++| |+|+++.+.|.++..    .++..
T Consensus        40 ~Y~r~~~p~~~~le~~la~l~----g----~~~~l~~~sG~~al~~~l~-ll~~G-d~Vl~~~~~y~~~~~~~~~~~~~~  109 (378)
T TIGR01329        40 DYTRSGNPTRTALESLLAKLD----K----ADRAFAFSSGMAALDVITR-LLNNG-DEIIAGDDLYGGTDRLLTQVVPRS  109 (378)
T ss_pred             ccCCCCChHHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHH-HhCCC-CEEEEcCCCchHHHHHHHHHHHHc
Confidence            566431  2456666666665    2    2567777778889988776 77999 999999999987654    45668


Q ss_pred             CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547          156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP  235 (311)
Q Consensus       156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~  235 (311)
                      |++++.++.       .|++.+++.++++++++++++|+||+|.+.+   +++|+++|+++|+++|+|++|....    .
T Consensus       110 G~~v~~vd~-------~d~~~le~~i~~~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~----~  175 (378)
T TIGR01329       110 GVVVVHVDT-------TDLDKVKAALGPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPL----L  175 (378)
T ss_pred             CcEEEEeCC-------CCHHHHHHhcCcCceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccc----c
Confidence            999998875       2789999999999999999999999999998   9999999999999999999986422    1


Q ss_pred             CCcccccCCCCCeEEEecCcccCCCC-cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHH
Q 021547          236 YIPMGVFGSIVPVITLGSISKRWIVP-GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVC  303 (311)
Q Consensus       236 ~~~~~~~~~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~  303 (311)
                      ..++. +   +-.++++|++|.++.+ +++.|++++.++       .+.++++.... .....+++..+.
T Consensus       176 ~~~l~-~---g~Di~v~S~tK~l~G~~~~~~G~v~~~~~-------~~~~~~~~~~~~~G~~~~~~~a~l  234 (378)
T TIGR01329       176 CNPLE-L---GADIVYHSATKFLAGHSDVMAGVLAVKGE-------EIAKKVYFLQNSTGSGLAPFDCWL  234 (378)
T ss_pred             CChhh-c---CCcEEEEecceeccCCccceeEEEEeCcH-------HHHHHHHHHHHhcCCcCCHHHHHH
Confidence            22222 1   1239999999988765 478999987553       25566665543 334455554443

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.83  E-value=1.4e-18  Score=158.26  Aligned_cols=193  Identities=17%  Similarity=0.150  Sum_probs=142.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCCC--CCCCC------CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc
Q 021547           61 FRTAAVAEDAIVDSVRSSMFN--CYAPM------FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR  132 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~--~Y~~~------~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~  132 (311)
                      .+.++.+++++.+.+......  .....      .-+.++|+.++++++      .++++|++|+|+++++..++.++..
T Consensus         8 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~v~~~~g~t~a~~~~l~~l~~   81 (353)
T TIGR03235         8 TPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALG------ADTEEVIFTSGATESNNLAILGLAR   81 (353)
T ss_pred             CCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCCHHHHHHHHHHHHHH
Confidence            467889999998877431111  10111      114567778887773      4678999999999999999988863


Q ss_pred             ----CCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHH
Q 021547          133 ----LGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQH  205 (311)
Q Consensus       133 ----~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~  205 (311)
                          +|.+.|++....|+.+.   ..++..|++++.++..  .++.+|++.+++.++++++++++++++||||.+++   
T Consensus        82 ~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---  156 (353)
T TIGR03235        82 AGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVD--ESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---  156 (353)
T ss_pred             hcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---
Confidence                44367888877777553   3455679999998864  34678999999999888999999999999999999   


Q ss_pred             HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          206 LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       206 l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      +++|.++|+++|+++|+|++++...    ....+..   .+..+++.|.+|.++.+|  +|++++++.
T Consensus       157 ~~~I~~l~~~~~~~~ivD~a~~~g~----~~~~~~~---~~~D~~~~s~~K~~gp~g--~g~l~~~~~  215 (353)
T TIGR03235       157 IREIAEVLEAHEAFFHVDAAQVVGK----ITVDLSA---DRIDLISCSGHKIYGPKG--IGALVIRKR  215 (353)
T ss_pred             HHHHHHHHHHcCCEEEEEchhhcCC----ccccccc---cCCCEEEeehhhcCCCCc--eEEEEEccC
Confidence            8999999999999999999988522    2222222   223388889999876555  888888654

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.83  E-value=1e-18  Score=160.79  Aligned_cols=191  Identities=20%  Similarity=0.161  Sum_probs=140.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC-------CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh--
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPM-------FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT--  131 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~-------~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~--  131 (311)
                      .+.++.+.+++.+.+.....+.+...       .-+.++|+.++++++      .++++|++|+|+++++..++.++.  
T Consensus         9 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~i~~t~~~t~a~~~al~~~~~~   82 (379)
T TIGR03402         9 TRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLG------AEPDEIIFTSGGTESDNTAIKSALAA   82 (379)
T ss_pred             CCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCcHHHHHHHHHHHHHHh
Confidence            46678999999887753211111111       113456666666663      357889999999999999988774  


Q ss_pred             -cCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHH
Q 021547          132 -RLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQ  207 (311)
Q Consensus       132 -~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~  207 (311)
                       .+| +.|++....|+.+..   .++..|.+++.++..  .++.+|.+.+++.++++++++++++++||||..+|   ++
T Consensus        83 ~~~~-~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~~  156 (379)
T TIGR03402        83 QPEK-RHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVD--EEGRLDLEELRAAITDDTALVSVMWANNETGTIFP---IE  156 (379)
T ss_pred             cCCC-CeEEEcccccHHHHHHHHHHHHcCCEEEEEccC--CCCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc---HH
Confidence             356 899999988876643   344579999998764  34568999999999989999999999999999999   77


Q ss_pred             HHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          208 KIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       208 ~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      +|.++|+++|+++++|++++.    |..+..+....   -.+++.|.+|.++.+|  +|++.+..
T Consensus       157 ~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~~~---~D~~~~s~~K~~gp~G--~g~l~v~~  212 (379)
T TIGR03402       157 EIGEIAKERGALFHTDAVQAV----GKIPIDLKEMN---IDMLSLSGHKLHGPKG--VGALYIRK  212 (379)
T ss_pred             HHHHHHHHcCCEEEEECcccc----cccccCcccCC---CCEEEEcHHHcCCCCc--eEEEEECC
Confidence            899999999999999999985    22223333222   2388889999766566  66766653

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.83  E-value=6.1e-19  Score=163.11  Aligned_cols=240  Identities=18%  Similarity=0.088  Sum_probs=160.5

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN-CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      .+++.++||..|--... .--.+|.+.+++.++++..... .+.......+|.+.++++.        ..+.++++++|+
T Consensus        37 ~~G~~~lD~~~g~~~~~-lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs  107 (396)
T PRK04073         37 PEGNRYMDMLSAYSAVN-QGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT--------GKDMVLPMNTGA  107 (396)
T ss_pred             CCCCEEEEcCCCHHhcc-CCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC--------CCCeEEEcCChH
Confidence            35888899876632111 1236789999999988743211 1111112234444444432        236899999999


Q ss_pred             HHHHHHHHHHhc---------CCCCEEEecCCCCcchH-HHHHHcCcE------------EEEeeccCCCCcccCHHHHH
Q 021547          121 EAVEIILTVITR---------LGAANILLPRPGWPFYE-SFAKRNHIE------------VRHFDLLPERGWEVDLEAVE  178 (311)
Q Consensus       121 ~a~~~~~~~l~~---------~g~d~Vl~~~p~~~~~~-~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~  178 (311)
                      +|++.+++....         +|+++|+.....|.+.. ......+..            +..++.       .|++.++
T Consensus       108 eA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~  180 (396)
T PRK04073        108 EAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEALK  180 (396)
T ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHHHH
Confidence            999998887742         34467888877776543 333222211            111211       2788999


Q ss_pred             hhcCCCccEEEEeCCCCCCccCCCHH-HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCccc
Q 021547          179 ALADENTAAIVIINPCNPCGNVLTYQ-HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR  257 (311)
Q Consensus       179 ~~l~~~~~~i~i~~p~nptG~~~~~~-~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~  257 (311)
                      +.++++++++++..++||+|..++++ .+++|.++|++||+++|+||+|.++.+.|..+ .........++   .++||.
T Consensus       181 ~~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~-~~~~~~~~pdi---~~~sK~  256 (396)
T PRK04073        181 AAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLF-ACDWDNVTPDM---YILGKA  256 (396)
T ss_pred             HhcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHH-HhhhcCCCCCE---EEeccc
Confidence            98888888888888899999998765 69999999999999999999999876655322 11222222233   368999


Q ss_pred             CCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       258 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++++|+|+||++++.        ++++.+... ...++++++++|+++.+.|+
T Consensus       257 lg~gg~~ig~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~  301 (396)
T PRK04073        257 LGGGVFPISCVAANR--------DILGVFTPGSHGSTFGGNPLACAVSIAALE  301 (396)
T ss_pred             ccCCCCcceEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence            999999999999853        467766543 33456789999999888875

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.83  E-value=1e-18  Score=159.89  Aligned_cols=186  Identities=16%  Similarity=0.163  Sum_probs=139.3

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~~  163 (311)
                      ....|++.++++.        ..+++++++|+++|+..++.+++++| |+|+++++.|.+....    .+..|+++..++
T Consensus        51 t~~~lE~~lA~l~--------g~~~~~~~~sG~~Ai~~al~all~~G-D~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d  121 (377)
T TIGR01324        51 THFALQDAMCELE--------GGAGCYLYPSGLAAVTNSILAFVKAG-DHVLMVDSAYEPTRYFCDIVLKRMGVDITYYD  121 (377)
T ss_pred             cHHHHHHHHHHHh--------CCCcEEEECcHHHHHHHHHHHhcCCC-CEEEEcCCCcHHHHHHHHHHHHhcCcEEEEEC
Confidence            3468999999888        34689999999999999999999999 9999999999876543    456788877764


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      ..       +.+.+++.+++++++|++.+|+||+|...+   +++|+++|+++|+++|+|++|+.-...    .++    
T Consensus       122 ~~-------~~e~l~~~i~~~tklV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~~----~pl----  183 (377)
T TIGR01324       122 PL-------IGEDIATLIQPNTKVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLLF----KPL----  183 (377)
T ss_pred             CC-------CHHHHHHhcCCCceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCcccccc----Ccc----
Confidence            31       237899999999999999999999988765   999999999999999999999863221    122    


Q ss_pred             CCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhh
Q 021547          244 SIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l  308 (311)
                      ..+..|+++|++|.++.++ ...|++++++        +.+++++.. ...+...++...+.+.+.+
T Consensus       184 ~~gaDivv~S~tK~l~G~~d~~gG~v~~~~--------~~~~~l~~~~~~~G~~l~p~~a~~~~rgl  242 (377)
T TIGR01324       184 EHGVDISIQAGTKYLVGHSDIMIGTVVANA--------RTWDQLREHSYLMGQMVDADDAYTTLRGL  242 (377)
T ss_pred             ccCceEEEecCceeccCCCCceEEEEEeCH--------HHHHHHHHHHHHhCCCCCHHHHHHHHhhh
Confidence            1223499999999998664 6788877643        244544433 2334455666555544433

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.83  E-value=4.5e-19  Score=165.41  Aligned_cols=243  Identities=15%  Similarity=0.092  Sum_probs=166.3

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      .+++.++||..|..... .-..+|.+.+++.+++....  .|. +..+..+|++++++++..       .++|++++|++
T Consensus        45 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~lae~l~~~~~~-------~~~v~~~~sGs  114 (423)
T TIGR00713        45 VDGNEYIDYVLSWGPLI-LGHAHPRVVEAVKEALERGT--SYGAPTEAEILLAKEIISRVPS-------VEMVRFVNSGT  114 (423)
T ss_pred             CCCCEEEEccccccccc-cCCCCHHHHHHHHHHHHhCC--cCCCCCHHHHHHHHHHHHhCCc-------ccEEEEeCCHH
Confidence            35889999988854321 12467999999999987543  343 556788999999988732       26899999999


Q ss_pred             HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH---cCcEEEEeeccCC-------CCc---ccCHHHHHhhcC---C
Q 021547          121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKR---NHIEVRHFDLLPE-------RGW---EVDLEAVEALAD---E  183 (311)
Q Consensus       121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~-------~~~---~~d~~~l~~~l~---~  183 (311)
                      +|++.+++.... .|.++|+...++|.++...+..   .+......+..+.       ...   ..|++.+++.+.   +
T Consensus       115 eA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~  194 (423)
T TIGR00713       115 EATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGE  194 (423)
T ss_pred             HHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCC
Confidence            999998886543 2338999999999987543332   1111000010000       000   027888888775   4


Q ss_pred             CccEEEEe-CCCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC
Q 021547          184 NTAAIVII-NPCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP  261 (311)
Q Consensus       184 ~~~~i~i~-~p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~  261 (311)
                      +++++++. .++| +|.+.+ ++.+++|.++|++||+++|+||+|.++.++ ... ....+...+++   .+|||.++ +
T Consensus       195 ~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g-~~~-~~~~~~~~pDi---~t~sK~l~-~  267 (423)
T TIGR00713       195 EIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVA-LGG-AQEYFGVEPDL---TTLGKIIG-G  267 (423)
T ss_pred             cEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccC-cch-hHHHhCCCcch---hhhhhhhc-C
Confidence            66777775 5667 788877 688999999999999999999999887543 211 11112222232   37999987 8


Q ss_pred             cceeeEEEeeCCCCccchhhHHHHHhh---h-hccccCCCchhHHHHHhhhh
Q 021547          262 GWRFGWLATNDPNGVLQKSGIVGSIKA---C-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       262 G~r~G~i~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |+|+||++++.        ++++.+..   . ...+++.++++|+++.+.|+
T Consensus       268 G~pig~v~~~~--------~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~  311 (423)
T TIGR00713       268 GLPVGAFGGRR--------EIMERLAPEGPVYQAGTLSGNPLAMAAGLATLK  311 (423)
T ss_pred             CCceeeeeEHH--------HHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHH
Confidence            99999999853        47777753   2 23456889999999877765

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.82  E-value=2.5e-18  Score=157.56  Aligned_cols=202  Identities=21%  Similarity=0.164  Sum_probs=145.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc----CCCC
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR----LGAA  136 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~----~g~d  136 (311)
                      .++.|.+.+++.+.+....... ....+..++.+.+.+++.+.+|  ...+++++++|+++++..++.++..    ++ +
T Consensus        30 ~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~-~  105 (371)
T PRK13520         30 TEPHPIARKAHEMFLETNLGDP-GLFPGTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEK-P  105 (371)
T ss_pred             cCchHHHHHHHHHHHhcCCCCc-ccCccHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCC-c
Confidence            4567888899988876421111 1012344444445555554444  3455788999999999998887754    46 8


Q ss_pred             EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh
Q 021547          137 NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL  216 (311)
Q Consensus       137 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~  216 (311)
                      +|++..+.|..+...++..|.+++.++..  .++.+|++.|++.++++++.+++++++|+||...+   +++|.++|+++
T Consensus       106 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~  180 (371)
T PRK13520        106 NIVVPESAHFSFDKAADMLGVELRRAPLD--DDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALEN  180 (371)
T ss_pred             eEEecCcchHHHHHHHHHcCceEEEecCC--CCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHc
Confidence            99999999999999999999999998764  35578999999999888888888888999999998   99999999999


Q ss_pred             CCEEEEeccccCCccC-CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          217 GILVIADEVYGHLAFG-STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       217 ~~~li~D~ay~~~~~~-~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      |+++++|++|+.+... ......+ .+...+-..+..|.+|. +++|.++|++++.++
T Consensus       181 g~~livD~a~~~~~~~~~~~~~~~-~~~~~~vd~~~~s~~K~-~~a~~~~G~~~~~~~  236 (371)
T PRK13520        181 GIFLHVDAAFGGFVIPFLDDPPNF-DFSLPGVDSITIDPHKM-GLAPIPAGGILFRDE  236 (371)
T ss_pred             CCCEEEEecchhHHHHhhcCCCCc-cccCCCCceEEECCccc-cCccCCceEEEEcCH
Confidence            9999999999865421 0111011 11111122555688895 778899999887653

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.82  E-value=1.2e-18  Score=158.72  Aligned_cols=194  Identities=20%  Similarity=0.144  Sum_probs=140.8

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEE
Q 021547           82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRH  161 (311)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~  161 (311)
                      +|+. +...+|+++++++.        ..+++++++|+++|+.+++. ++++| |+|+++.+.|......+....... .
T Consensus        50 R~~~-p~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l~~G-D~VI~~~~~yg~~~~~~~~~~~~~-~  117 (364)
T PRK07269         50 RTKN-PTRAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VFPVG-SKVVAVRDLYGGSFRWFNQQEKEG-R  117 (364)
T ss_pred             CCCC-ccHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-HhCCC-CEEEEecCCcCchHHHHHHHHhcC-c
Confidence            3443 46789999999998        45789999999999999985 56899 999999999976554433221110 0


Q ss_pred             eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547          162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV  241 (311)
Q Consensus       162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~  241 (311)
                      +..    .+..|++.+++.+++++++|++++|+||+|...+   +++|+++|+++|+++|+|++|..-.+ ..   ++..
T Consensus       118 ~~~----~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~-~~---pl~~  186 (364)
T PRK07269        118 FHF----TYANTEEELIAAIEEDTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIY-QR---PIEL  186 (364)
T ss_pred             EEE----EecCCHHHHHHhcCcCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc-CC---chhh
Confidence            111    1235889999999999999999999999999887   99999999999999999999864222 11   2221


Q ss_pred             cCCCCCeEEEecCcccCCCCcc-eeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          242 FGSIVPVITLGSISKRWIVPGW-RFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       242 ~~~~~~~i~i~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                          +-.|+++|++|.++.+|- =.|+|++.++       ++.++++.... .+...+++..+.+..-|+
T Consensus       187 ----gaDivv~S~tK~l~g~~d~~gG~v~~~~~-------~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~  245 (364)
T PRK07269        187 ----GADIVLHSATKYLSGHNDVLAGVVVTNDL-------ELYEKLFYNLNTTGAVLSPFDSYLLMRGLK  245 (364)
T ss_pred             ----CCcEEEecCceeccCCCcccceEEEeCcH-------HHHHHHHHHHHHhCCCCCHHHHHHHHcCCC
Confidence                123999999999887653 4577776553       36666665442 345667877776665554

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.82  E-value=1.9e-19  Score=163.44  Aligned_cols=198  Identities=16%  Similarity=0.038  Sum_probs=150.9

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-----------
Q 021547           64 AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR-----------  132 (311)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~-----------  132 (311)
                      +..+.+.+...+..+. ..|....+..++++++++++.+.+|.+...+++++|+|+++++..++.+++.           
T Consensus        12 ~~~~~~~~~~~~n~~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~   90 (345)
T cd06450          12 PALLLEMLTSAKNAID-FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGG   90 (345)
T ss_pred             HHHHHHHHHHhcCCCC-cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccc
Confidence            3445555555544333 3588888999999999999999888764556899999999999999988853           


Q ss_pred             -CC-CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCCCccCCCHH
Q 021547          133 -LG-AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNPCGNVLTYQ  204 (311)
Q Consensus       133 -~g-~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~  204 (311)
                       ++ .+.|+++.++|..+...++..|.+++.++.++  ++.+|++.|++.+++      +++++++++++||||...+  
T Consensus        91 ~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~--  166 (345)
T cd06450          91 RGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDE--DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP--  166 (345)
T ss_pred             cccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCC--CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC--
Confidence             22 14788999999999888888899999998753  347999999998876      7788899999999999877  


Q ss_pred             HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                       +++|.++|+++|+++++|++|+.+.+....... ...+  ..-..+..|++|+ +.++.++|++++
T Consensus       167 -~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~-l~~p~g~g~~~~  229 (345)
T cd06450         167 -LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGI--ERVDSISVDPHKY-GLVPLGCSAVLV  229 (345)
T ss_pred             -HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCc--cccCEEEEchhHh-hCCCcchHHHHH
Confidence             999999999999999999999876542111111 0111  1123567799996 456678888754

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.82  E-value=1.1e-18  Score=141.65  Aligned_cols=166  Identities=19%  Similarity=0.102  Sum_probs=131.4

Q ss_pred             cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH-HHHHHcCcEEEEeeccCC
Q 021547           89 LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE-SFAKRNHIEVRHFDLLPE  167 (311)
Q Consensus        89 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~  167 (311)
                      +.++++.++++++      .+.+++++++|+++++.+++.++..++ ++|+++.+.|.+.. ..++..|.++..++....
T Consensus         2 ~~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~   74 (170)
T cd01494           2 LEELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPG-DEVIVDANGHGSRYWVAAELAGAKPVPVPVDDA   74 (170)
T ss_pred             HHHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCC-CEEEEeecccceehhhHHHhcCCEEEEeccCCC
Confidence            3578889998884      466789999999999999999998888 99999999999988 888999999999987544


Q ss_pred             CCcccCHHHHHhh-cCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547          168 RGWEVDLEAVEAL-ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV  246 (311)
Q Consensus       168 ~~~~~d~~~l~~~-l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~  246 (311)
                      .....+.+.+++. ..++++++++++++|++|...+   +++|.++|+++|+++|+|++|..+...... ..   ....+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~---~~~~~  147 (170)
T cd01494          75 GYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPG-VL---IPEGG  147 (170)
T ss_pred             CccchhhhhhhhccccCceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccc-cc---ccccc
Confidence            3333333355443 3568889999999999999998   588999999999999999999986654211 01   11223


Q ss_pred             CeEEEecCcccCCCCcceeeEEEe
Q 021547          247 PVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       247 ~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      ..+++.|++|.|+.  .++|++++
T Consensus       148 ~d~~~~s~~K~~~~--~~~G~l~~  169 (170)
T cd01494         148 ADVVTFSLHKNLGG--EGGGVVIV  169 (170)
T ss_pred             CCEEEEEcccccCC--CceEEEEe
Confidence            45888999999765  78999876

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.82  E-value=1.2e-18  Score=155.88  Aligned_cols=204  Identities=19%  Similarity=0.204  Sum_probs=167.1

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCC--CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS----SMFNCYA--PMFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~----~~~~~Y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      .+.+.+.++.+.     ..|.++.|.++|...+..    ++...|.  ...+.++.|+.||++++.      ++++|++|
T Consensus        40 ~~~~~vyld~~a-----t~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInA------d~~dIiFt  108 (428)
T KOG1549|consen   40 HGTRPVYLDNQA-----TGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINA------DPSDIVFT  108 (428)
T ss_pred             CCCccEEEecCc-----CCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCC------CCCcEEEe
Confidence            466788888887     357889999999987652    2222233  334578899999999964      77779999


Q ss_pred             CChHHHHHHHHHHHhc-CCCC----EEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEE
Q 021547          117 LGCMEAVEIILTVITR-LGAA----NILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAI  188 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~~-~g~d----~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i  188 (311)
                      +|+|+++++++..+.. .+ |    .|++.+..|+...   ...+..|++++.+|+.  +++..|.+.+++.++++|+++
T Consensus       109 s~ATEs~Nlvl~~v~~~~~-~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv  185 (428)
T KOG1549|consen  109 SGATESNNLVLKGVARFFG-DKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLV  185 (428)
T ss_pred             CCchHHHHHHHHHhhcccc-ccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEE
Confidence            9999999999999864 34 5    8998888888654   4667788999999876  556789999999999999999


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547          189 VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL  268 (311)
Q Consensus       189 ~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i  268 (311)
                      .+.+.+|.+|+.+|   +++|+++|+++++.+++|.+++-    |+-...+..++.+   +...|.+|+||.+|  +|++
T Consensus       186 ~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D---~~s~s~HK~ygp~~--iGaL  253 (428)
T KOG1549|consen  186 SIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNAD---FLSISAHKIYGPPG--IGAL  253 (428)
T ss_pred             EEEecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCch---heeeecccccCCCc--ceEE
Confidence            99999999999999   99999999999999999999996    5555566655544   78889999999999  8888


Q ss_pred             EeeC
Q 021547          269 ATND  272 (311)
Q Consensus       269 ~~~~  272 (311)
                      .+..
T Consensus       254 Yvr~  257 (428)
T KOG1549|consen  254 YVRR  257 (428)
T ss_pred             EEcc
Confidence            8763

>PRK05939 hypothetical protein; Provisional

Probab=99.82  E-value=1.8e-18  Score=159.23  Aligned_cols=156  Identities=18%  Similarity=0.197  Sum_probs=127.1

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccC
Q 021547           90 PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLP  166 (311)
Q Consensus        90 ~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~  166 (311)
                      ..|++.++++..        .+..++++++++|+..++.+++++| |+|+++.+.|..+.   ..++..|++++.++.  
T Consensus        50 ~~lE~~la~leg--------~~~~v~~ssG~~Ai~~~l~all~~G-d~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~--  118 (397)
T PRK05939         50 AALEAKITKMEG--------GVGTVCFATGMAAIAAVFLTLLRAG-DHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA--  118 (397)
T ss_pred             HHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHcCCC-CEEEECCCccccHHHHHHHHHhcCCEEEEECC--
Confidence            488888888873        3345666666999999999999999 99999999997543   356778999988875  


Q ss_pred             CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547          167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV  246 (311)
Q Consensus       167 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~  246 (311)
                           .|++++++.++++++++++++|+||+|.+.+   +++|+++|+++|+++|+|++|+...    ...+.    ..+
T Consensus       119 -----~d~e~l~~~l~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~t~a~~~----~~~~~----~~g  182 (397)
T PRK05939        119 -----TDVQNVAAAIRPNTRMVFVETIANPGTQVAD---LAGIGALCRERGLLYVVDNTMTSPW----LFRPK----DVG  182 (397)
T ss_pred             -----CCHHHHHHhCCCCCeEEEEECCCCCCCCHHh---HHHHHHHHHHcCCEEEEECCccccc----ccCcc----ccC
Confidence                 2789999999999999999999999999865   9999999999999999999987421    11111    123


Q ss_pred             CeEEEecCcccCCCCcceeeEEEeeC
Q 021547          247 PVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       247 ~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      ..+++.|+||.++.+|.++|++++.+
T Consensus       183 aDivv~S~sK~~~g~g~~igg~v~~~  208 (397)
T PRK05939        183 ASLVINSLSKYIAGHGNALGGAVTDT  208 (397)
T ss_pred             CEEEEecCeecccCCCCeEEEEEecC
Confidence            45999999999999999999988753

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.82  E-value=2.4e-18  Score=159.75  Aligned_cols=160  Identities=23%  Similarity=0.233  Sum_probs=127.7

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHH----cCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKR----NHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~----~g~~~~~~  162 (311)
                      +...+|++.++++..        .+..+++++|++|+.+++.+++++| |+|+++.+.|.+....+..    .|+++..+
T Consensus        58 pt~~~Le~~lA~l~g--------~~~~l~~ssG~~Ai~~al~al~~~G-d~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~  128 (425)
T PRK06084         58 PTNDVLEQRVAALEG--------GVGALAVASGMAAITYAIQTIAEAG-DNIVSVAKLYGGTYNLLAHTLPRIGIETRFA  128 (425)
T ss_pred             chHHHHHHHHHHHhC--------CCceeEehhHHHHHHHHHHHHhCCC-CEEEEeCCCcchHHHHHHHhcccceeEEEEE
Confidence            456788888888873        3456788888999999999999999 9999999999855444332    45566555


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      +.       .|++.+++.+++++++|++++|+||+|.+++   +++|.++|+++|+++|+|++|+....    ..++. +
T Consensus       129 d~-------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~----~~p~~-~  193 (425)
T PRK06084        129 AH-------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL----CRPFE-H  193 (425)
T ss_pred             CC-------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CChhh-c
Confidence            42       3889999999889999999999999999999   89999999999999999999985321    11221 1


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                         +..|++.|++|.++.+|.++|.+++.+.
T Consensus       194 ---gaDivv~S~tK~l~G~g~~~gG~v~~~~  221 (425)
T PRK06084        194 ---GADIVVHSLTKYIGGHGTSIGGIVVDSG  221 (425)
T ss_pred             ---CCCEEEECchhcccccccceeEEEEeCC
Confidence               2339999999999999999999888543

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.82  E-value=1.6e-18  Score=157.75  Aligned_cols=190  Identities=16%  Similarity=0.137  Sum_probs=134.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL  140 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~  140 (311)
                      ..+++.+++++....... ...|.  .-..++|+.++++++    .+-+...|++++|+++++..++..++.++ |+|++
T Consensus         8 ~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~la~~~~----~~~~~~~i~~~~~gt~~l~~~~~~~~~~~-~~vi~   79 (355)
T TIGR03301         8 LSTSATVRDAMLVDWCHW-DSEFN--DVTDQVRDRLLALAG----GDDNHTCVLLQGSGTFAVEATIGSLVPRD-GKLLV   79 (355)
T ss_pred             CCCCHHHHHHhhhhccCC-CHHHH--HHHHHHHHHHHHHhc----CCCCCcEEEEeCCcHHHHHHHHHhccCCC-CeEEE
Confidence            456788888887633211 01122  234556666666663    23222368889999999999999998888 87776


Q ss_pred             cCCC-Ccc-hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh
Q 021547          141 PRPG-WPF-YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--NTAAIVIINPCNPCGNVLTYQHLQKIAETARKL  216 (311)
Q Consensus       141 ~~p~-~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~  216 (311)
                      ..+. |.. +...++..|.+++.++..  .++.+|.+.+++.+++  +.+.+++++++||||...+   +++|+++|++|
T Consensus        80 ~~~~~~~~~~~~~a~~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~  154 (355)
T TIGR03301        80 LINGAYGERLAKICEYLGIPHTDLNFS--EYEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSH  154 (355)
T ss_pred             ECCCchhhHHHHHHHHcCCceEEEecC--CCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHc
Confidence            5554 443 456788899999998764  3467899999998864  4567778889999999988   89999999999


Q ss_pred             CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC-CCCcceeeEEEeeC
Q 021547          217 GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW-IVPGWRFGWLATND  272 (311)
Q Consensus       217 ~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~  272 (311)
                      |+++|+|++++..   .. ...+..+   +..+++.|++|++ +.+|  +||++++.
T Consensus       155 ~~~livD~~~s~g---~~-~~~~~~~---~~d~~~~s~~K~l~~~~G--~g~~~~~~  202 (355)
T TIGR03301       155 GAVLIVDAMSSFG---AI-PIDIEEL---DVDALIASANKCLEGVPG--FGFVIARR  202 (355)
T ss_pred             CCEEEEEeccccC---Cc-ccchhhc---CccEEEecCCcccccCCc--eeEEEECH
Confidence            9999999887642   21 2223322   3348899999985 4456  69999864

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>PLN02651 cysteine desulfurase

Probab=99.82  E-value=4.6e-18  Score=155.59  Aligned_cols=199  Identities=17%  Similarity=0.112  Sum_probs=144.2

Q ss_pred             ecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------C--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           49 PLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA------P--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        49 ~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~------~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      .|+.+.+     .+.++.+.+++.+.+.....+...      .  ..-+.++|+.++++++      .++++|++|+|++
T Consensus         2 Yld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~v~~t~~~t   70 (364)
T PLN02651          2 YLDMQAT-----TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIG------ADPKEIIFTSGAT   70 (364)
T ss_pred             cccCcCC-----CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCCHH
Confidence            4555553     357788999998876432111110      0  1113456666776663      4567999999999


Q ss_pred             HHHHHHHHHH----hcCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC
Q 021547          121 EAVEIILTVI----TRLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP  193 (311)
Q Consensus       121 ~a~~~~~~~l----~~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p  193 (311)
                      ++++.++..+    .++| |+|++....|+.+..   .++..|.+++.++..  .++.+|++++++.+++++++++++++
T Consensus        71 ~a~~~~l~~~~~~~~~~g-~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv~v~~~  147 (364)
T PLN02651         71 ESNNLAIKGVMHFYKDKK-KHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGLVDLDELAAAIRPDTALVSVMAV  147 (364)
T ss_pred             HHHHHHHHHHHHhccCCC-CEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCcEEEEEECC
Confidence            9988877665    3678 999999988876543   334578888888764  34678999999999999999999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      +|+||...|   +++|.++|+++|+++++|.+++..    .-+..+..++   ..+++.|.+|. +.| ..+|++++.++
T Consensus       148 ~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~g----~~~~~~~~~~---~D~~~~s~hK~-~gp-~G~g~l~v~~~  215 (364)
T PLN02651        148 NNEIGVIQP---VEEIGELCREKKVLFHTDAAQAVG----KIPVDVDDLG---VDLMSISGHKI-YGP-KGVGALYVRRR  215 (364)
T ss_pred             CCCceeccc---HHHHHHHHHHcCCEEEEEcchhhC----CcccCcccCC---CCEEEechhhh-CCC-CceEEEEEcCC
Confidence            999999999   889999999999999999999852    1222233322   34899999996 433 45888887653

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.81  E-value=2.8e-18  Score=157.22  Aligned_cols=190  Identities=18%  Similarity=0.156  Sum_probs=138.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL  140 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~  140 (311)
                      .++++.++++|...+.. ....|.  ....++|+.++++++    .+-..+.+++++|++.++..++.++..+| |.|++
T Consensus        14 ~~~~~~~~~a~~~~~~~-~~~~~~--~~~~~~~~~l~~l~~----~~~~~~~i~~~~~gt~~l~~~~~~l~~~~-~~vlv   85 (368)
T PRK13479         14 LTTSRTVREAMLRDWGS-WDDDFN--ALTASVRAKLVAIAT----GEEGYTCVPLQGSGTFSVEAAIGSLVPRD-GKVLV   85 (368)
T ss_pred             CCCCHHHHHHhCCCCCC-CChHHH--HHHHHHHHHHHHHhC----CCCCceEEEEcCCcHHHHHHHHHhccCCC-CeEEE
Confidence            45678888887665421 111122  245567777777663    22223568899999999999999999999 99999


Q ss_pred             cCCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh
Q 021547          141 PRPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--NTAAIVIINPCNPCGNVLTYQHLQKIAETARKL  216 (311)
Q Consensus       141 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~  216 (311)
                      ..++|.+.  ...++..|.+++.++..  .++.+|++++++.+++  +++++++++|+||||...|   +++|.++|+++
T Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~  160 (368)
T PRK13479         86 PDNGAYGARIAQIAEYLGIAHVVLDTG--EDEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRH  160 (368)
T ss_pred             EeCCchHHHHHHHHHHcCCcEEEEECC--CCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHc
Confidence            88887665  47788899999999864  3456899999998754  4668899999999999999   88999999999


Q ss_pred             CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC-CCCcceeeEEEeeC
Q 021547          217 GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW-IVPGWRFGWLATND  272 (311)
Q Consensus       217 ~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~  272 (311)
                      |+++|+|+++..   +. ....+..++   ..+++.|++|.+ +.+|  +||++++.
T Consensus       161 ~~~livDa~~~~---g~-~~~~~~~~~---~d~~v~s~~K~l~g~~G--~G~l~~~~  208 (368)
T PRK13479        161 GKRLIVDAMSSF---GA-IPIDIAELG---IDALISSANKCIEGVPG--FGFVIARR  208 (368)
T ss_pred             CCEEEEEccccc---CC-ccccccccC---ceEEEecCccccccCCC--ceEEEECH
Confidence            999999966543   22 223333322   237788999975 5677  69999864

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.81  E-value=4.7e-18  Score=156.01  Aligned_cols=191  Identities=19%  Similarity=0.289  Sum_probs=140.9

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecCC
Q 021547           65 AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPRP  143 (311)
Q Consensus        65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~p  143 (311)
                      +.-.+++.+.+.++..  |+    ..++++++++++.+.+|    .+++++++|+++|+.+++.++ +++| |+|+++.+
T Consensus        11 ~~~~~~~~~~l~~~~~--~g----~~~~~~~~e~~la~~~g----~~~~v~~~sgt~al~~~l~~~~~~~G-d~Viv~~~   79 (375)
T PRK11706         11 GTELDYIQQAMSSGKL--CG----DGGFTRRCQQWLEQRFG----SAKVLLTPSCTAALEMAALLLDIQPG-DEVIMPSY   79 (375)
T ss_pred             HHHHHHHHHHHHcCCc--cC----CCHHHHHHHHHHHHHhC----CCeEEEECCHHHHHHHHHHHhCCCCC-CEEEECCC
Confidence            4446777777765432  32    23456666666655433    368999999999999887766 6899 99999999


Q ss_pred             CCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547          144 GWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD  223 (311)
Q Consensus       144 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D  223 (311)
                      +|..+...+...|++++.+++++ +++.+|++++++.++++++++++++   ++|...+   +++|.++|+++|++||+|
T Consensus        80 t~~~~~~~~~~~G~~~v~~d~d~-~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~---~~~i~~la~~~~i~vIeD  152 (375)
T PRK11706         80 TFVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIEAAITPKTRAIVPVH---YAGVACE---MDTIMALAKKHNLFVVED  152 (375)
T ss_pred             CcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcCCCCeEEEEeC---CCCCccC---HHHHHHHHHHcCCEEEEE
Confidence            99999999999999999998754 4578999999999988999988764   6898776   889999999999999999


Q ss_pred             ccccCCc-cCCCCCCcccccCCCCCeEEEecCc--ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547          224 EVYGHLA-FGSTPYIPMGVFGSIVPVITLGSIS--KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       224 ~ay~~~~-~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      ++|+... +++.+.   ..+.    .+.+.||+  |.++ +|.+.++++ .++       ++.++++..
T Consensus       153 ~a~a~g~~~~~~~~---g~~~----~~~~~Sf~~~K~l~-~g~gG~~~~-~~~-------~~~~~~~~~  205 (375)
T PRK11706        153 AAQGVMSTYKGRAL---GTIG----HIGCFSFHETKNYT-AGEGGALLI-NDP-------ALIERAEII  205 (375)
T ss_pred             CccccccccCCeee---ecCc----CEEEEeCCCCcccc-ccCCeEEEE-CCH-------HHHHHHHHH
Confidence            9999765 444332   2221    14455655  9974 487766665 332       356655544

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.81  E-value=2e-18  Score=160.10  Aligned_cols=244  Identities=17%  Similarity=0.159  Sum_probs=160.3

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      .++..++||..|--..+.+.. +|.+.+++.+++....  ...|.. ....++.+.++++.        ..+.+++++++
T Consensus        36 ~dG~~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~sG  105 (406)
T PRK12381         36 QQGKEYIDFAGGIAVNALGHA-HPALREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT--------FADRVFFCNSG  105 (406)
T ss_pred             CCCCEEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhcccccCccCC-HHHHHHHHHHHhhC--------CCCeEEEcCCc
Confidence            357889999876222223344 8899999999986321  111211 12234444444432        23689999999


Q ss_pred             HHHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcCcEEEE----eeccC--CCCcccCHHHHHhhcCCCcc
Q 021547          120 MEAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRNHIEVRH----FDLLP--ERGWEVDLEAVEALADENTA  186 (311)
Q Consensus       120 ~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~----~~~~~--~~~~~~d~~~l~~~l~~~~~  186 (311)
                      ++|++.+++....       +++.+|+.....|.+....+...+.....    .++.+  ......|++.+++.+.+++.
T Consensus       106 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~a  185 (406)
T PRK12381        106 AEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTC  185 (406)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCee
Confidence            9999999988632       23378999899898765433332211100    00000  00012378899998877766


Q ss_pred             EEEEeCCCCCCccCC--CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce
Q 021547          187 AIVIINPCNPCGNVL--TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR  264 (311)
Q Consensus       187 ~i~i~~p~nptG~~~--~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r  264 (311)
                      ++++ .|.+++|-++  +.+.+++|.++|++||+++|+||+|.++.+.|.. .....+...++   +.++||.++ +|+|
T Consensus       186 avii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~-~~~~~~~v~pD---i~t~sK~l~-gG~~  259 (406)
T PRK12381        186 AVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGEL-YAYMHYGVTPD---VLTTAKALG-GGFP  259 (406)
T ss_pred             EEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcch-hhhHhhCCCCC---EEEehhhhh-CCCc
Confidence            6666 6888887654  7899999999999999999999999887666643 22222222222   359999986 7999


Q ss_pred             eeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          265 FGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       265 ~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +||++++.        ++++.+... ...+++.+++.|+++.+.|+
T Consensus       260 ig~~~~~~--------~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~  297 (406)
T PRK12381        260 IGAMLTTE--------KCASVMTVGTHGTTYGGNPLASAVAGKVLE  297 (406)
T ss_pred             eEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            99999853        477777653 33456789999999888553

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.81  E-value=2.3e-18  Score=159.62  Aligned_cols=239  Identities=17%  Similarity=0.069  Sum_probs=159.0

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN-CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      ++++++||..|.-.. +.--.+|.+.+++.++++..... .+.......++.+.++++.    +    .+.+++++++++
T Consensus        39 ~g~~~lD~~~~~~~~-~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs~  109 (401)
T PRK00854         39 DGNRYLDCLSAYSAV-NQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT----G----SHKVLPMNSGAE  109 (401)
T ss_pred             CCCEEEEcCcchhhc-cCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC----C----CCEEEEeCCcHH
Confidence            478889987763211 11124788999999998753221 1112223445666666554    2    358999999999


Q ss_pred             HHHHHHHHHhc---------CCCCEEEecCCCCcchHHHHHHcCc-------------EEEEeeccCCCCcccCHHHHHh
Q 021547          122 AVEIILTVITR---------LGAANILLPRPGWPFYESFAKRNHI-------------EVRHFDLLPERGWEVDLEAVEA  179 (311)
Q Consensus       122 a~~~~~~~l~~---------~g~d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~  179 (311)
                      |++.++..+..         +|.++|++....|.+....+...+.             ++..++       ..|++.+++
T Consensus       110 A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~  182 (401)
T PRK00854        110 AVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEA  182 (401)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHHH
Confidence            99999998853         2436788887777664333322221             122221       137899999


Q ss_pred             hcCCCccEEEEeCCCCCCccCCCH-HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC
Q 021547          180 LADENTAAIVIINPCNPCGNVLTY-QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW  258 (311)
Q Consensus       180 ~l~~~~~~i~i~~p~nptG~~~~~-~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~  258 (311)
                      .+.+++++|++.+|+||+|.++++ +.+++|.++|++||+++|+||+|.++.+.|..+ .........+++ +  ++|.+
T Consensus       183 ~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~-~~~~~g~~~D~~-~--~~K~l  258 (401)
T PRK00854        183 AITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLL-AEEHEGIEADVT-L--IGKAL  258 (401)
T ss_pred             HhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHh-HHhhcCCCCCEE-E--ecccc
Confidence            998899999999999999999974 459999999999999999999998766554311 111111122223 3  36998


Q ss_pred             CCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          259 IVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       259 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +...+|+||++++.        ++++.+... ...+++.+++.|+++.+.|+
T Consensus       259 ~gg~~~ig~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~  302 (401)
T PRK00854        259 SGGFYPVSAVLSNS--------EVLGVLKPGQHGSTFGGNPLACAVARAALK  302 (401)
T ss_pred             cCCccCeEEEEEcH--------HHHhcccCCCCCCCCCcCHHHHHHHHHHHH
Confidence            76558999999854        356666533 33355679999998888774

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.81  E-value=3.4e-18  Score=156.69  Aligned_cols=184  Identities=20%  Similarity=0.205  Sum_probs=133.0

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcc-hH---HHHHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPF-YE---SFAKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~-~~---~~~~~~g~~~~~~  162 (311)
                      +...+|++.++++.+        .+..+++++++.++.+++ .++++| |+|+++.|.|.+ |.   ..++..|++++.+
T Consensus        50 p~~~~Le~~lA~l~g--------~~~~~~~~sG~aai~~~~-~~l~~G-d~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v  119 (377)
T PRK07671         50 PTRAALEELIAVLEG--------GHAGFAFGSGMAAITAVM-MLFSSG-DHVILTDDVYGGTYRVMTKVLNRFGIEHTFV  119 (377)
T ss_pred             hHHHHHHHHHHHHhC--------CCceEEeCCHHHHHHHHH-HHhCCC-CEEEECCCccchHHHHHHHHHhcCCeEEEEE
Confidence            346788888888883        223455555577887765 467899 999999999984 33   2445578888888


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      +.       .|++.+++++++++++|++++|+||+|...+   +++|.++|+++|+++|+|++|+...+. .   ++. +
T Consensus       120 ~~-------~d~~~l~~ai~~~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~-~---p~~-~  184 (377)
T PRK07671        120 DT-------SNLEEVEEAIRPNTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQ-S---PIS-L  184 (377)
T ss_pred             CC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccC-C---hhh-h
Confidence            63       3889999999999999999999999999987   999999999999999999999753322 1   111 1


Q ss_pred             CCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhhcc-ccCCCchhHHHHH
Q 021547          243 GSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACLGV-RSGPSTLIQVCEM  305 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~  305 (311)
                         +..|++.|+||.++.++ .-.|++++.++       +++++++..+.. ....++...+.+.
T Consensus       185 ---g~Divv~S~sK~l~G~~~~~~G~~v~~~~-------~l~~~~~~~~~~~g~~~~~~~a~l~~  239 (377)
T PRK07671        185 ---GADIVLHSATKYLGGHSDVVAGLVVVNSP-------ELAEDLHFVQNSTGGILGPQDSWLLL  239 (377)
T ss_pred             ---CCeEEEecCcccccCCccceeEEEEeCcH-------HHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence               22499999999998765 34566666543       366666665432 3445555444443

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.80  E-value=4.1e-18  Score=156.90  Aligned_cols=180  Identities=16%  Similarity=0.129  Sum_probs=132.8

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~~  163 (311)
                      ...++++.++++++.      . +.++ +++|+.++.+++. ++++| |+|+++.+.|.+..    ..++..|++++.++
T Consensus        55 ~~~~le~~lA~l~g~------~-~~v~-~~sG~~ai~~~l~-~l~~G-d~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~  124 (390)
T PRK08064         55 TREALEDIIAELEGG------T-KGFA-FASGMAAISTAFL-LLSKG-DHVLISEDVYGGTYRMITEVLSRFGIEHTFVD  124 (390)
T ss_pred             hHHHHHHHHHHHhCC------C-CeEE-ECCHHHHHHHHHH-HhCCC-CEEEEccCccchHHHHHHHHHHHcCCEEEEEC
Confidence            467888899888842      2 3444 4555778888886 67899 99999999997432    45667899999887


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      ..       |++.+++.++++++++++++|+||||.+.+   +++|.++|+++|+++|+|++|......    .++ .+ 
T Consensus       125 ~~-------d~~~l~~~l~~~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~----~~~-~~-  188 (390)
T PRK08064        125 MT-------NLEEVAQNIKPNTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ----KPL-DL-  188 (390)
T ss_pred             CC-------CHHHHHHhcCCCceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc----Cch-hh-
Confidence            52       789999999999999999999999999988   889999999999999999999863321    111 11 


Q ss_pred             CCCCeEEEecCcccCCCC-cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHH
Q 021547          244 SIVPVITLGSISKRWIVP-GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQV  302 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~  302 (311)
                        +..+++.|+||.++.+ |...|++++.++       +++++++.... .....++...+
T Consensus       189 --g~Divv~S~tK~~~G~~~~laG~~v~~~~-------~~~~~l~~~~~~~g~~~~~~~a~  240 (390)
T PRK08064        189 --GADVVLHSATKFLAGHSDVLAGLAVVKDE-------ELAQKLYFLQNSFGAVLGVQDCW  240 (390)
T ss_pred             --CCcEEEeecceeccCCccceeEEEEeCCH-------HHHHHHHHHHHhcCCCCCHHHHH
Confidence              2348999999998754 456788776543       36777776644 23333444333

>PRK07505 hypothetical protein; Provisional

Probab=99.80  E-value=1.5e-17  Score=154.07  Aligned_cols=234  Identities=15%  Similarity=0.155  Sum_probs=148.6

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCC-----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-FNCYAP-----MFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~-----~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      +++.++||+.+++   .++..+|++.+++.++++... ...+..     .....++++.+++++    +  .   +.+++
T Consensus        44 ~g~~~ld~~s~~~---lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~---~~~~~  111 (402)
T PRK07505         44 DGHTFVNFVSCSY---LGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF----G--A---SVLTF  111 (402)
T ss_pred             CCceEEEeecCCc---cCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh----C--C---CEEEE
Confidence            4788999987652   344778999999999987421 111111     122345566666555    2  2   44544


Q ss_pred             CChHHHHHHHHHHHh----cCCCCEEEecCCCCcc-hH--HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEE
Q 021547          117 LGCMEAVEIILTVIT----RLGAANILLPRPGWPF-YE--SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIV  189 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~----~~g~d~Vl~~~p~~~~-~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~  189 (311)
                      ++++++...++..+.    .+|...|++.+..|.+ +.  ......+.+++.++.       .|++.+++.+++++++++
T Consensus       112 ~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~v  184 (402)
T PRK07505        112 TSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVAY  184 (402)
T ss_pred             CChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEEE
Confidence            455667777765543    2232346565544433 21  112223456666654       388999998877789999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccC--CCCCeEEEecCcccCCCCccee
Q 021547          190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFG--SIVPVITLGSISKRWIVPGWRF  265 (311)
Q Consensus       190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~--~~~~~i~i~s~sK~~~~~G~r~  265 (311)
                      +++|+||+|.+++   +++|.++|+++|+++|+||+|+...++  |... ....+.  ..+++|+++|+||.|+.+|   
T Consensus       185 l~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~-~~~~~~~~~~d~~i~~~s~sK~~~~~G---  257 (402)
T PRK07505        185 VADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGY-VRSELDYRLNERTIIAASLGKAFGASG---  257 (402)
T ss_pred             EEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCch-HHHHcCCCCCCCeEEEEechhhhhccC---
Confidence            9999999999999   888889999999999999999654443  2221 112222  2456899999999999887   


Q ss_pred             eEEEeeCCCCccchhhHHHHHhhhhc---cccCCCchhHHHHHhhhh
Q 021547          266 GWLATNDPNGVLQKSGIVGSIKACLG---VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       266 G~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l~  309 (311)
                      ||++++++       ++++.+.....   ++.++++++++++.+.++
T Consensus       258 g~~~~~~~-------~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~  297 (402)
T PRK07505        258 GVIMLGDA-------EQIELILRYAGPLAFSQSLNVAALGAILASAE  297 (402)
T ss_pred             eEEEeCCH-------HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHH
Confidence            88876443       36676665433   222345566666655543

>PRK05968 hypothetical protein; Provisional

Probab=99.80  E-value=9.1e-18  Score=154.54  Aligned_cols=186  Identities=19%  Similarity=0.130  Sum_probs=136.0

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~  163 (311)
                      ...+|++.++++++.        +..+++++++.|+.+++.+++++| |+|+++.+.|.+.    ...++..|++++.++
T Consensus        64 ~~~~le~~lA~l~g~--------~~av~~~sG~~Ai~~al~al~~~G-d~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd  134 (389)
T PRK05968         64 TVRAFEEMLAKLEGA--------EDARGFASGMAAISSTVLSFVEPG-DRIVAVRHVYPDAFRLFETILKRMGVEVDYVD  134 (389)
T ss_pred             hHHHHHHHHHHHhCC--------CcEEEECCHHHHHHHHHHHHhCCC-CEEEEeCCCchHHHHHHHHHHHHcCceEEEeC
Confidence            467899999998842        345556677889999999999999 9999999999863    356677899998886


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      .       .|++.+++.+ ++++++++++|+|+++   +..++++|.++|+++|+++|+|++|+...+.. +   +. + 
T Consensus       135 ~-------~d~~~l~~~i-~~tklV~ie~pt~~~~---~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~-p---~~-~-  197 (389)
T PRK05968        135 G-------RDEEAVAKAL-PGAKLLYLESPTSWVF---ELQDVAALAALAKRHGVVTMIDNSWASPVFQR-P---IT-L-  197 (389)
T ss_pred             C-------CCHHHHHHhc-ccCCEEEEECCCCCCC---cHHHHHHHHHHHHHcCCEEEEECCCcchhccC-c---hh-c-
Confidence            4       2788998887 5789999987777664   55669999999999999999999998644321 1   11 1 


Q ss_pred             CCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhh--ccccCCCchhHHHHHhhhh
Q 021547          244 SIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACL--GVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~q~~~~~~l~  309 (311)
                        +..+++.|+||.++.+| .+.|+++.+.        +++++++...  ......+++.++.+...|+
T Consensus       198 --g~Divv~S~tK~l~g~~~~~gG~i~~~~--------~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~  256 (389)
T PRK05968        198 --GVDLVIHSASKYLGGHSDTVAGVVAGSK--------EHIARINAEAYPYLGAKLSPFEAWLLLRGLR  256 (389)
T ss_pred             --CCcEEEeeccccccCCCCeEEEEEEECH--------HHHHHHHHHHHHhCCCCCChHHHHHHHcccC
Confidence              12388899999998876 5788877532        3566665432  1234566676666555443

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.80  E-value=4.2e-17  Score=149.67  Aligned_cols=195  Identities=21%  Similarity=0.191  Sum_probs=135.7

Q ss_pred             cHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh------cCCC
Q 021547           64 AAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT------RLGA  135 (311)
Q Consensus        64 ~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~------~~g~  135 (311)
                      .+.+.+++.......  ....|+   +..++.+.+.+.+.+.+|  ++.+++++++|+++++..++.++.      .+| 
T Consensus        33 ~~~~~~a~~~~~~~~~~~~~~~~---~~~~~~~~~~~~la~~~g--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g-  106 (373)
T TIGR03812        33 HPIAVKAYDMFIETNLGDPGLFP---GTKKIEEEVVGSLGNLLH--LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRT-  106 (373)
T ss_pred             hHHHHHHHHHHhhcCCCCcccCc---cHHHHHHHHHHHHHHHhC--CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCC-
Confidence            355566666664421  111132   333333344444443333  356678899999999988877764      367 


Q ss_pred             CEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547          136 ANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK  215 (311)
Q Consensus       136 d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~  215 (311)
                      |+|+++.++|..+...++..|++++.++..  .++.+|++++++.+++++..+++..|+||||...+   +++|.++|++
T Consensus       107 ~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~  181 (373)
T TIGR03812       107 PNIIVPESAHFSFEKAAEMLGLELRYAPLD--EDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSKIALE  181 (373)
T ss_pred             cEEEECCcchHHHHHHHHHcCCeEEEEeeC--CCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHHHHHH
Confidence            899999999999999999999999999864  45678999999998877766666668999999988   8899999999


Q ss_pred             hCCEEEEeccccCCccC------CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          216 LGILVIADEVYGHLAFG------STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       216 ~~~~li~D~ay~~~~~~------~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      +|+++|+|++|+.+...      +.....+..   .+-..+..|.+| |++++.|+|++++.++
T Consensus       182 ~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~---~~~d~~~~s~~K-~~~~~~~~G~~~~~~~  241 (373)
T TIGR03812       182 NGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSL---PGVQSITIDPHK-MGLSPIPAGGILFRSK  241 (373)
T ss_pred             cCCeEEEEcCchhHHHHHHhcCCCCCCccccC---CCCCEEEECccc-cCCCcCCceEEEEeCH
Confidence            99999999999864321      001111111   111245568889 5788889998776543

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.80  E-value=2.2e-17  Score=152.62  Aligned_cols=213  Identities=13%  Similarity=0.148  Sum_probs=156.8

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN------CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      .+++++|+.++   |.++..+|.++++..+.++.....      -++...-..+|++.+++++        ..+..++.+
T Consensus       101 ~r~~l~FsSnd---YLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~--------g~e~all~s  169 (476)
T PLN02955        101 FKKLLLFSGND---YLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK--------KKEDCLVCP  169 (476)
T ss_pred             CceEEEeeccC---ccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH--------CCCcEEEEC
Confidence            46899999999   568899999999999988742211      1112223478999999999        456788888


Q ss_pred             ChHHHHHHHHHHHh--------------cCCCCEEEecCCCCcchHHHHHHc----CcEEEEeeccCCCCcccCHHHHHh
Q 021547          118 GCMEAVEIILTVIT--------------RLGAANILLPRPGWPFYESFAKRN----HIEVRHFDLLPERGWEVDLEAVEA  179 (311)
Q Consensus       118 g~~~a~~~~~~~l~--------------~~g~d~Vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~  179 (311)
                      ++..|...++.+|.              .++ |.|++..-.|......++..    +.++..++.       -|++.|++
T Consensus       170 SGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~-d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~  241 (476)
T PLN02955        170 TGFAANMAAMVAIGSVASLLAASGKPLKNEK-VAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNS  241 (476)
T ss_pred             ChHHHHHHHHHHHhhccccccccccccCCCC-cEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHHH
Confidence            88889888888873              355 78889999999988888876    466666653       28888888


Q ss_pred             hcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCc
Q 021547          180 LADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSIS  255 (311)
Q Consensus       180 ~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~s  255 (311)
                      .++.   +.+.|++....++.|.+.+   +++|.++|++||.++|+||+|+...++.........+. ..+..|+++|||
T Consensus       242 ~L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLs  318 (476)
T PLN02955        242 LLSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLS  318 (476)
T ss_pred             HHHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCc
Confidence            7643   3445555556899999999   99999999999999999999998776532111122221 134569999999


Q ss_pred             ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547          256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      |.+|+.|   |+++++.        ++++.++..
T Consensus       319 KA~G~~G---Gfi~gs~--------~~~~~l~~~  341 (476)
T PLN02955        319 KAAGCHG---GFIACSK--------KWKQLIQSR  341 (476)
T ss_pred             cchhccC---ceeecHH--------HHHHHHHHh
Confidence            9998887   9988753        366766654

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.80  E-value=6.4e-18  Score=154.56  Aligned_cols=187  Identities=17%  Similarity=0.147  Sum_probs=133.9

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEE
Q 021547           62 RTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANIL  139 (311)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl  139 (311)
                      ..++.+.+++...+.     ++.+  ..-+.++|+.++++++    .+-..+.|++|+|++++++.++.++..+| |.++
T Consensus        13 ~~~~~v~~~~~~~~~-----~~~~~~~~~~~~~r~~la~l~~----~~~~~~~i~~t~~~t~al~~~~~~l~~~~-~~vl   82 (363)
T TIGR02326        13 TTSRTVKEAMLFDWC-----TWDSDYNIVVEQIRQQLLALAT----AEEGYTSVLLQGSGTFAVEAVIGSAVPKD-GKLL   82 (363)
T ss_pred             CCCHHHHHHhCCCCC-----CCChHHHHHHHHHHHHHHHHhC----CCCCceEEEEcCCCHHHHHHHHHhcCCCC-CeEE
Confidence            456677766654432     2221  1123455666666663    22123479999999999999999998888 8777


Q ss_pred             ecCCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--CccEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547          140 LPRPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--NTAAIVIINPCNPCGNVLTYQHLQKIAETARK  215 (311)
Q Consensus       140 ~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~  215 (311)
                      +..+.+.+.  ...++..|.+++.++..  .++.+|++.+++.+++  +++.+.++++.||||..+|   +++|+++|++
T Consensus        83 v~~~~~~~~~~~~~a~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~  157 (363)
T TIGR02326        83 VVINGAYGARIVQIAEYLGIPHHVVDTG--EVEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHR  157 (363)
T ss_pred             EEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHH
Confidence            766555443  46678899999998864  3557899999998864  4577888899999999999   8999999999


Q ss_pred             hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCC-CCcceeeEEEeeC
Q 021547          216 LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI-VPGWRFGWLATND  272 (311)
Q Consensus       216 ~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~G~i~~~~  272 (311)
                      +|+++|+|++++.   +. .+..+..++   ..+++.|++|+++ .+|  +||++++.
T Consensus       158 ~g~~livD~~~~~---g~-~~~~~~~~~---~D~~~~s~~K~l~~p~G--~G~l~~~~  206 (363)
T TIGR02326       158 HGKVTIVDAMSSF---GG-IPIDIAELH---IDYLISSANKCIQGVPG--FGFVIARQ  206 (363)
T ss_pred             cCCEEEEEccccc---cC-cccchhhcC---ccEEEecCccccccCCc--ceEEEECH
Confidence            9999999998763   22 223344333   2388999999863 345  79998864

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.80  E-value=6.9e-18  Score=154.35  Aligned_cols=190  Identities=15%  Similarity=0.096  Sum_probs=134.6

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~~  163 (311)
                      +..+.++.+++.+....+    .+..++++++++|+..++.+++++| |+|+++.|.|.++..    .++..|+++..++
T Consensus        61 ~gnPt~~~Le~~la~le~----~~~~v~~sSG~aAi~~~l~all~~G-D~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd  135 (395)
T PRK05967         61 RGTPTTDALCKAIDALEG----SAGTILVPSGLAAVTVPFLGFLSPG-DHALIVDSVYYPTRHFCDTMLKRLGVEVEYYD  135 (395)
T ss_pred             CCChHHHHHHHHHHHHhC----CCCEEEECcHHHHHHHHHHHhcCCC-CEEEEccCCcHHHHHHHHHHHHhcCeEEEEeC
Confidence            334455555555543222    2344566667999999999999999 999999999998764    5688899988875


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      ..       +.+.+++++++++++|++++|+||++..   .++++|+++|+++|+++|+|++|....+    ..++. + 
T Consensus       136 ~~-------~~e~l~~al~~~TklV~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~----~~pl~-~-  199 (395)
T PRK05967        136 PE-------IGAGIAKLMRPNTKVVHTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLY----FRPLD-F-  199 (395)
T ss_pred             CC-------CHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCcee----cChhH-c-
Confidence            31       4577999999999999999999998654   4599999999999999999999986322    12222 2 


Q ss_pred             CCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhh
Q 021547          244 SIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l  308 (311)
                        +..|++.|++|.++..| ...|+++. ++       ++.++++.. .....+.+++..+.+.+-|
T Consensus       200 --GaDivv~S~tKy~~Gh~d~~~G~v~~-~~-------~~~~~l~~~~~~~G~~~~p~da~l~~rgl  256 (395)
T PRK05967        200 --GVDISIHAATKYPSGHSDILLGTVSA-NE-------KCWPQLLEAHGTLGLCAGPDDTYQILRGL  256 (395)
T ss_pred             --CCCEEEEecccccCCCCCeeEEEEEc-CH-------HHHHHHHHHHHHcCCCCCHHHHHHHHcCc
Confidence              22399999999977644 66675554 32       244555433 2344566777666555444

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.80  E-value=9.9e-18  Score=156.08  Aligned_cols=218  Identities=14%  Similarity=0.058  Sum_probs=142.3

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----FNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      .+..++|..++      -+.++.+++++...+....     ...|. ...-...+.+...+.+.+.+|.  +..+|++++
T Consensus        24 ~~~~~~l~~~~------n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~i~~~s   95 (416)
T PRK00011         24 QEEHIELIASE------NFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA--EYANVQPHS   95 (416)
T ss_pred             HhcCeeeeccc------CcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCC--CceeeecCC
Confidence            46779999886      2368899999876643110     00111 1111223333122234433343  344566655


Q ss_pred             ChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH-----HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEe
Q 021547          118 GCMEAVEIILTVITRLGAANILLPRPGWPFYES-----FAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVII  191 (311)
Q Consensus       118 g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~  191 (311)
                       +++++..++.+++++| |+|+++.|+|..+..     .....|.+++.++++. +++.+|++++++.+++ ++++++++
T Consensus        96 -gt~al~~~l~~l~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~~~  172 (416)
T PRK00011         96 -GSQANAAVYFALLKPG-DTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLIIAG  172 (416)
T ss_pred             -chHHHHHHHHHhcCCC-CEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEEEEC
Confidence             4779999999999999 999999999975422     1233456777776542 3467999999998865 78888887


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      .++++  ...+   +++|.++|+++|+++|+|++|.. +.+.|..+..+.     ...+++.|+||++  +|.|.||+++
T Consensus       173 ~~~~~--~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-----~~di~~~S~~K~l--~g~~gg~i~~  240 (416)
T PRK00011        173 ASAYS--RPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-----HADVVTTTTHKTL--RGPRGGLILT  240 (416)
T ss_pred             CCcCC--CccC---HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-----CCcEEEecCCcCC--CCCCceEEEe
Confidence            65554  4445   89999999999999999999853 333332222222     1238899999974  7899999998


Q ss_pred             eCCCCccchhhHHHHHhhhhc
Q 021547          271 NDPNGVLQKSGIVGSIKACLG  291 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~  291 (311)
                      +++       +++++++....
T Consensus       241 ~~~-------~~~~~l~~~~~  254 (416)
T PRK00011        241 NDE-------ELAKKINSAVF  254 (416)
T ss_pred             CCH-------HHHHHHHHHhC
Confidence            653       36777765543

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.79  E-value=1.2e-17  Score=153.07  Aligned_cols=182  Identities=16%  Similarity=0.143  Sum_probs=132.1

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~~  163 (311)
                      ....|++.++++.+        .+..+++++|+.|+.+++. ++++| |+|+++.|.|.+..    ..++..|++++.++
T Consensus        51 ~~~~Le~~la~l~g--------~~~al~~~SG~~Al~~~l~-~l~pG-d~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd  120 (380)
T PRK06176         51 TRFALEELIADLEG--------GVKGFAFASGLAGIHAVFS-LFQSG-DHVLLGDDVYGGTFRLFDKVLVKNGLSCTIID  120 (380)
T ss_pred             hHHHHHHHHHHHhC--------CCCEEEECCHHHHHHHHHH-HcCCC-CEEEEcCCChhHHHHHHHHHHHhcCeEEEEcC
Confidence            46788888888873        2345566666789987774 66899 99999999997543    45567888888776


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      .       .|++.+++.+++++++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|+...+. .+   +. + 
T Consensus       121 ~-------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~-~p---~~-~-  184 (380)
T PRK06176        121 T-------SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ-NP---LL-L-  184 (380)
T ss_pred             C-------CCHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC-Cc---cc-c-
Confidence            4       3889999999999999999999999999998   889999999999999999999864322 22   21 1 


Q ss_pred             CCCCeEEEecCcccCCCCcc-eeeEEEeeCCCCccchhhHHHHHhhhhcc-ccCCCchhHHHH
Q 021547          244 SIVPVITLGSISKRWIVPGW-RFGWLATNDPNGVLQKSGIVGSIKACLGV-RSGPSTLIQVCE  304 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~  304 (311)
                        +..+++.|++|.++.+|- -.|+++..++       ++.++++..+.. ....++...+.+
T Consensus       185 --gaDivv~S~tK~l~g~~d~~gG~vv~~~~-------~~~~~~~~~~~~~G~~~~~~~~~l~  238 (380)
T PRK06176        185 --GADIVVHSGTKYLGGHSDVVAGLVTTNNE-------ALAQEIAFFQNAIGGVLGPQDSWLL  238 (380)
T ss_pred             --CCCEEEecCceeccCCccceeeEEEecHH-------HHHHHHHHHHHHhcCCCCHHHHHHH
Confidence              123999999999988774 4555655432       355666554332 233455444433

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.79  E-value=1.4e-17  Score=154.00  Aligned_cols=239  Identities=18%  Similarity=0.132  Sum_probs=157.8

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      ++++++||..|.-..+.+. .+|.+.+++.++++...  ..... ...+....+++.+.+..    ..+.++++++|++|
T Consensus        33 dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~--~~~~~-~~~~~~~~la~~L~~~~----~~~~~~f~~SGseA  104 (397)
T TIGR03246        33 QGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLW--HIGNG-YTNEPVLRLAKKLVDAT----FADKVFFCNSGAEA  104 (397)
T ss_pred             CCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcc--cccCc-cCCHHHHHHHHHHHhhC----CCCEEEEeCCcHHH
Confidence            5889999988632222334 58999999999987421  11110 11223344444444322    23689999999999


Q ss_pred             HHHHHHHHhc-------CCCCEEEecCCCCcchHH-HHHHcCcE------------EEEeeccCCCCcccCHHHHHhhcC
Q 021547          123 VEIILTVITR-------LGAANILLPRPGWPFYES-FAKRNHIE------------VRHFDLLPERGWEVDLEAVEALAD  182 (311)
Q Consensus       123 ~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~  182 (311)
                      ++.+++....       +|+++|+..+..|.+... .....+..            +..++.       .|++.+++.+.
T Consensus       105 ~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~  177 (397)
T TIGR03246       105 NEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAKALIS  177 (397)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHHHHhc
Confidence            9999987731       344678887777766532 33323211            111211       27899999888


Q ss_pred             CCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC
Q 021547          183 ENTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP  261 (311)
Q Consensus       183 ~~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~  261 (311)
                      ++++++++..++++.|... +.+.+++|.++|++||+++|+||+|.++...|.-+ ....++-..++   .+++|.++ .
T Consensus       178 ~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~~~gv~pDi---~t~~K~lg-g  252 (397)
T TIGR03246       178 DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDI---LTSAKALG-G  252 (397)
T ss_pred             cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch-hhhhcCCCCCE---EEeehhhh-C
Confidence            7888888776666777654 88999999999999999999999998775555322 22223222233   38999986 7


Q ss_pred             cceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          262 GWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       262 G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |+|+||++++.        ++++.+... ...+++.++++++++.+.|+
T Consensus       253 G~pigav~~~~--------~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~  293 (397)
T TIGR03246       253 GFPIGAMLTTT--------EIAAHLKVGTHGTTYGGNPLACAVAGKVLD  293 (397)
T ss_pred             CcceeEEEEcH--------HHHHhccCCCcCCCCCCCHHHHHHHHHHHH
Confidence            99999999853        366666544 33456678899888877764

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.79  E-value=3.1e-17  Score=152.53  Aligned_cols=157  Identities=20%  Similarity=0.165  Sum_probs=128.5

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~  163 (311)
                      ....|++.++++..        .+..+++++|++|+.+++.+++++| |+|+++.+.|.+.    ...+...|++++.++
T Consensus        64 ~~~~le~~lA~l~g--------~~~al~~~SG~~Ai~~al~all~pG-d~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd  134 (427)
T PRK05994         64 TNAVLEERVAALEG--------GTAALAVASGHAAQFLVFHTLLQPG-DEFIAARKLYGGSINQFGHAFKSFGWQVRWAD  134 (427)
T ss_pred             cHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCC-CEEEEecCcchhHHHHHHHHHHhcCcEEEEEC
Confidence            45678888888873        3457888999999999999999999 9999999999854    344677899988886


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      .       .|++.+++.++++++++++++|+||+|.+++   +++|.++|+++|+++|+|++|....    ...++. + 
T Consensus       135 ~-------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~----~~~pl~-~-  198 (427)
T PRK05994        135 A-------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPY----LIRPIE-H-  198 (427)
T ss_pred             C-------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccc----cCCccc-c-
Confidence            4       2789999999989999999999999999998   8999999999999999999998522    112221 1 


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                        +..+++.|++|.++.+|-.+|.+++.
T Consensus       199 --gaDivv~S~tK~lgg~~~~~gG~v~~  224 (427)
T PRK05994        199 --GADIVVHSLTKFLGGHGNSMGGIIVD  224 (427)
T ss_pred             --CCcEEEEcCccccCCCCCcEEEEEEe
Confidence              22399999999999888888877764

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.78  E-value=1.8e-17  Score=155.67  Aligned_cols=201  Identities=27%  Similarity=0.294  Sum_probs=142.2

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--CCcHHHHHHHH---HHHhhcCCCCCCCCCEEEeCChH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPM--FGLPLARRAVA---EYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia---~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..++++.|.|+    +..+..+.++....-   ....|.+.  .-....++++.   +++.+.+|.  +.+++.+|+|++
T Consensus        69 ~~~~lg~g~~~----~~~p~~~~~~~~~~~---~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~--~~~~v~~~~g~t  139 (447)
T PRK00451         69 YPSFLGAGAYD----HYIPAVVDHIISRSE---FYTAYTPYQPEISQGTLQAIFEYQTMICELTGM--DVANASMYDGAT  139 (447)
T ss_pred             CcccCcccccC----CcCcHHHHHHHhchh---HHHhcCCCCCccchHHHHHHHHHHHHHHHHhCC--CcceEEecCcHH
Confidence            67788888754    445556655543221   11234430  11233555555   344665664  456899999999


Q ss_pred             HHHHHHHHHHh-cCCCCEEEecCCCCcchHHHHHH----cCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCC
Q 021547          121 EAVEIILTVIT-RLGAANILLPRPGWPFYESFAKR----NHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCN  195 (311)
Q Consensus       121 ~a~~~~~~~l~-~~g~d~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~n  195 (311)
                      +++.+++.++. .+| |+|+++.+.|+.+...++.    .|.+++.++.++  + .+|++++++.++++++++++++| |
T Consensus       140 ~~~~~~~~a~~~~~g-~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t~~v~l~~p-n  214 (447)
T PRK00451        140 ALAEAALMAVRITKR-KKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDTAAVVVQYP-N  214 (447)
T ss_pred             HHHHHHHHHHHhcCC-CEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCeEEEEEECC-C
Confidence            99999998885 688 9999999999988766554    689999998643  3 78999999999999999999998 8


Q ss_pred             CCccCCCHHHHHHHHHHHHHhCCEEEE--eccccCCccCCCCCCcccccCCCCCeEEEe---cCcccCCCCcceeeEEEe
Q 021547          196 PCGNVLTYQHLQKIAETARKLGILVIA--DEVYGHLAFGSTPYIPMGVFGSIVPVITLG---SISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       196 ptG~~~~~~~l~~l~~l~~~~~~~li~--D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~---s~sK~~~~~G~r~G~i~~  270 (311)
                      |||.+.+   +++|.++|+++|+++++  |.......    .  ....+   +..+++.   ++||.+.+.|+++||+.+
T Consensus       215 ~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~----~--~~~~~---~~D~~~~s~~k~~~~~~~~Gpg~G~l~~  282 (447)
T PRK00451        215 FFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLL----K--PPGEY---GADIVVGEGQPLGIPLSFGGPYLGFFAT  282 (447)
T ss_pred             CCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccC----C--CcccC---CCCEEEECCCcCCCCCCCCCCCchHHHh
Confidence            9999987   99999999999999998  54332111    0  11111   2235555   677778888999999987


Q ss_pred             eC
Q 021547          271 ND  272 (311)
Q Consensus       271 ~~  272 (311)
                      +.
T Consensus       283 ~~  284 (447)
T PRK00451        283 RK  284 (447)
T ss_pred             hH
Confidence            53

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=99.78  E-value=8.2e-18  Score=142.85  Aligned_cols=282  Identities=18%  Similarity=0.168  Sum_probs=199.0

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCC-cHHHHHHHHHHHhc-CCCCCCCCCCCcHHHHHHHHHHH
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRT-AAVAEDAIVDSVRS-SMFNCYAPMFGLPLARRAVAEYL  100 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~-~~~~~~a~~~~~~~-~~~~~Y~~~~g~~~lr~~ia~~l  100 (311)
                      +.+..++.+-..    +.+...+..+|++.|.....-+-|+ -|.|+++-...... ...+.|.|-.|++.++++-++.+
T Consensus        12 a~p~~vf~~~~~----y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~   87 (410)
T KOG1412|consen   12 APPIEVFKLNAS----YGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELL   87 (410)
T ss_pred             CChHHHHhhHHH----hcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHh
Confidence            555666665543    4444578889999996553333332 24444333322222 23457999999999999999999


Q ss_pred             hhcCCCCCCCCCE--EEeCChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcC-cEEEEeeccCCCCcccCHH
Q 021547          101 NRDLPYKLSADDI--YITLGCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNH-IEVRHFDLLPERGWEVDLE  175 (311)
Q Consensus       101 ~~~~g~~~~~~~v--~~t~g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~d~~  175 (311)
                      .......+..+++  +-+-|||+|+.+....|..  .. ..|.+..|+|.+....++..| ..+..++....++-++|++
T Consensus        88 lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~-~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e  166 (410)
T KOG1412|consen   88 LGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNK-NTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLE  166 (410)
T ss_pred             cCCCchhhhhccccceeeccccchhhhhHHHHHHhccc-ceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHH
Confidence            6554445556665  4467778898887777743  34 689999999999999999999 5677788777777789999


Q ss_pred             HHHhhcCCCc-cEEEEe-CC-CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCC--CcccccCCC-CCeE
Q 021547          176 AVEALADENT-AAIVII-NP-CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPY--IPMGVFGSI-VPVI  249 (311)
Q Consensus       176 ~l~~~l~~~~-~~i~i~-~p-~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~--~~~~~~~~~-~~~i  249 (311)
                      .+...++..+ +.+++. .+ +||||.-.+.|++..|++..++.+.+.+.|-+|+++.-++...  ..+..+... ..++
T Consensus       167 ~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~f  246 (410)
T KOG1412|consen  167 GFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELF  246 (410)
T ss_pred             HHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEE
Confidence            8888776433 333333 34 8999999999999999999999999999999999987654221  122222223 3489


Q ss_pred             EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547          250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.||+|.||+.+.|+|.+.+-.++.-. .+.+..++... +.-.++|+.....+++++|++
T Consensus       247 v~QSFaKNfGlYneRvGnltvv~~n~a~-i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~t  307 (410)
T KOG1412|consen  247 VCQSFAKNFGLYNERVGNLTVVVNNPAV-IAGVKSQLTLVIRSNWSNPPAYGARIVHKVLST  307 (410)
T ss_pred             EEhhhhhhcccccccccceEEEecChhH-HHHHHHHHHHHHhhccCCCcchhhHHHHHHhcC
Confidence            9999999999999999997654332111 23455665555 344578888899999998875

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.78  E-value=2.9e-17  Score=152.67  Aligned_cols=158  Identities=17%  Similarity=0.162  Sum_probs=130.2

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~  162 (311)
                      +...++++.+++++.        .+..++|+++++|+.+++.+++++| |+|+++...|......    ++..|++++.+
T Consensus        64 p~~~~le~~lA~l~g--------~~~av~~sSGt~Al~~al~~ll~~G-d~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~v  134 (433)
T PRK08134         64 PTVAVLEERVAALEG--------GVGAIATASGQAALHLAIATLMGAG-SHIVASSALYGGSHNLLHYTLRRFGIETTFV  134 (433)
T ss_pred             hHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCC-CEEEEeCCccHHHHHHHHHHHhhCCeEEEEE
Confidence            346788999998883        2357889999999999999999999 9999999999865443    35589999988


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      ++.       |++.+++.+++++++|++.+|+||+|.+.+   +++|.++|+++|+++|+|.++..-..    ..++ .+
T Consensus       135 d~~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~----~~pl-~~  199 (433)
T PRK08134        135 KPG-------DIDGWRAAIRPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL----LRPF-EH  199 (433)
T ss_pred             CCC-------CHHHHHHhcCCCCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc----CCch-hc
Confidence            752       789999999999999999999999999999   99999999999999999999975221    1222 12


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      .   -.+++.|.+|.++.+|..+|.+++.
T Consensus       200 G---aD~vv~S~tK~l~g~g~~~gG~v~~  225 (433)
T PRK08134        200 G---ADLVYHSATKFLGGHGTAIGGVLVD  225 (433)
T ss_pred             C---CCEEEeccccccCCCCCceEEEEEe
Confidence            2   2399999999999999888887764

>PLN02509 cystathionine beta-lyase

Probab=99.78  E-value=2.3e-17  Score=153.77  Aligned_cols=166  Identities=23%  Similarity=0.262  Sum_probs=125.3

Q ss_pred             CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcC
Q 021547           81 NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNH  156 (311)
Q Consensus        81 ~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g  156 (311)
                      ..|... |.+ .++++.+++.+..|    .++.++++|+++++.+++ .++++| |+|+++.+.|..+.    ..+...|
T Consensus       125 ~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~~~SG~aAi~~il-~ll~~G-D~VI~~~~~y~~t~~ll~~~l~~~G  196 (464)
T PLN02509        125 YDYTRS-GNP-TRDALESLLAKLDK----ADRAFCFTSGMAALSAVT-HLIKNG-EEIVAGDDVYGGSDRLLSQVVPRSG  196 (464)
T ss_pred             CccCCC-CCH-HHHHHHHHHHHHhC----CCEEEEeCcHHHHHHHHH-HHhCCC-CEEEEcCCchhhHHHHHHHHHHHCC
Confidence            357654 554 56777777766433    456777788888987666 567899 99999999999876    3455789


Q ss_pred             cEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCC
Q 021547          157 IEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPY  236 (311)
Q Consensus       157 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~  236 (311)
                      ++++.++.       .|++++++.+++++++|++++|+||+|...+   +++|+++|+++|+++|+|++|+.... +.  
T Consensus       197 ~~v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i~D---l~~I~~lAk~~g~~lIVD~A~a~~~~-~~--  263 (464)
T PLN02509        197 VVVKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQISD---IRKIAEMAHAQGALVLVDNSIMSPVL-SR--  263 (464)
T ss_pred             eEEEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCHHH---HHHHHHHHHHcCCEEEEECCcccccc-CC--
Confidence            88887753       3689999999999999999999999999755   99999999999999999999875332 21  


Q ss_pred             CcccccCCCCCeEEEecCcccCCCCcc-eeeEEEeeC
Q 021547          237 IPMGVFGSIVPVITLGSISKRWIVPGW-RFGWLATND  272 (311)
Q Consensus       237 ~~~~~~~~~~~~i~i~s~sK~~~~~G~-r~G~i~~~~  272 (311)
                       ++. +   +..++++|++|.++.+|- -.|.+++.+
T Consensus       264 -pl~-~---gaDivv~S~tK~l~G~gdv~gG~v~~~~  295 (464)
T PLN02509        264 -PLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKG  295 (464)
T ss_pred             -hhh-c---CCcEEEecCcccccCCCccceeEEEecc
Confidence             111 1   223999999999887653 456666544

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=99.78  E-value=2.8e-18  Score=147.50  Aligned_cols=283  Identities=18%  Similarity=0.181  Sum_probs=203.1

Q ss_pred             HHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCC-CCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHH
Q 021547           20 EREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAF-PCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAE   98 (311)
Q Consensus        20 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~-~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~   98 (311)
                      -++++++.|-.+.+.+    .+...+..||++.|...-. ...-.-+.|++|-++.........|.|-.|++++.+..++
T Consensus        31 V~maPpDpILGVTeAf----k~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sak  106 (427)
T KOG1411|consen   31 VEMAPPDPILGVTEAF----KKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAK  106 (427)
T ss_pred             CCCCCCCCcccHHHHH----hcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHH
Confidence            3457888888888764    3336788899999954311 1122457777777766655555689999999999999999


Q ss_pred             HHhhcCCCCCCCCCEEE--eCChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCH
Q 021547           99 YLNRDLPYKLSADDIYI--TLGCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDL  174 (311)
Q Consensus        99 ~l~~~~g~~~~~~~v~~--t~g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  174 (311)
                      +........+..++|+.  |-+||+++......|..  ++ ..|.++.|+|.+.....+..|+.+..++.......++|.
T Consensus       107 La~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~-~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~  185 (427)
T KOG1411|consen  107 LALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPS-RDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDF  185 (427)
T ss_pred             HhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccc-cceeecCCcccccCccccccCcceeeeeeccccccccch
Confidence            99553333334456644  56678888877766643  67 889999999999999999999999998887767778888


Q ss_pred             HHHHhhcCCCc-cEEEEeC--CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC--CCcccccC-CCCCe
Q 021547          175 EAVEALADENT-AAIVIIN--PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP--YIPMGVFG-SIVPV  248 (311)
Q Consensus       175 ~~l~~~l~~~~-~~i~i~~--p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~--~~~~~~~~-~~~~~  248 (311)
                      +.+.+-+.+-+ ..+++.+  .+||||+-.+.|++++|.++.++.+.+-+.|.+|.+|..++..  -..+..+. ...++
T Consensus       186 ~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~  265 (427)
T KOG1411|consen  186 KGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEI  265 (427)
T ss_pred             HHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCce
Confidence            87655554322 2234443  4999999999999999999999999999999999997654321  11122222 24468


Q ss_pred             EEEecCcccCCCCcceeeEE--EeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547          249 ITLGSISKRWIVPGWRFGWL--ATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       249 i~i~s~sK~~~~~G~r~G~i--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++.|+.|.+|+.|.|+|.+  ++.+.+  .. ..+..+++... ....+++-=...+++.+|+|
T Consensus       266 ~laQSyAKNMGLYgERvGa~svvc~~ad--~A-~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d  327 (427)
T KOG1411|consen  266 LLAQSYAKNMGLYGERVGALSVVCKDAD--EA-KRVESQLKILIRPMYSNPPLHGARIVATILSD  327 (427)
T ss_pred             EeehhhhhhcchhhhccceeEEEecCHH--HH-HHHHHHHHHHhcccccCCCccchhhhhhccCC
Confidence            99999999999999999996  333322  11 13556666663 34456666677777777765

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.78  E-value=2.5e-17  Score=146.83  Aligned_cols=198  Identities=20%  Similarity=0.205  Sum_probs=156.1

Q ss_pred             eeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCCC--CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----FNCYA--PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        47 ~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      +|.|+...     ..|..|++.++|...+....     .+.|+  ....+++.|+.|++.+      ++++++|++|+|+
T Consensus         2 miYlD~~A-----TTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~   70 (386)
T COG1104           2 MIYLDNAA-----TTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGA   70 (386)
T ss_pred             cccccccc-----cCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCC
Confidence            35555554     35778999999998876421     12222  1233577889999999      4577999999999


Q ss_pred             HHHHHHHHHHH--hc----CCCCEEEecCCCCcchHHHHHHc---CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEE
Q 021547          120 MEAVEIILTVI--TR----LGAANILLPRPGWPFYESFAKRN---HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVI  190 (311)
Q Consensus       120 ~~a~~~~~~~l--~~----~g~d~Vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i  190 (311)
                      |++.++++...  ..    .| ..|+++.-.|+...+.++.+   |+++.+++++  .++.+|+++|++++++++.+|.+
T Consensus        71 TEsnNlaI~g~~~a~~~~~~~-~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~--~~G~v~~e~L~~al~~~T~LVSi  147 (386)
T COG1104          71 TESNNLAIKGAALAYRNAQKG-KHIITSAIEHPAVLNTCRYLERQGFEVTYLPVD--SNGLVDLEQLEEALRPDTILVSI  147 (386)
T ss_pred             cHHHHHHHHhhHHhhhcccCC-CeEEEcccccHHHHHHHHHHHhcCCeEEEeCCC--CCCeEcHHHHHHhcCCCceEEEE
Confidence            99999988873  21    45 89999999999887766666   9999999875  36789999999999999999999


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          191 INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       191 ~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      ...||.+|++.|   +++|.++|+++++++++|.+++.    |+-+..+..+.-   .+...|-+|.+|..|  +|.+.+
T Consensus       148 m~aNnE~G~IQp---I~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~~~v---D~ls~SaHK~~GpkG--iGaLyv  215 (386)
T COG1104         148 MHANNETGTIQP---IAEIGEICKERGILFHVDAVQAV----GKIPIDLEELGV---DLLSFSAHKFGGPKG--IGALYV  215 (386)
T ss_pred             EecccCeeeccc---HHHHHHHHHHcCCeEEEehhhhc----CceeccccccCc---ceEEeehhhccCCCc--eEEEEE
Confidence            999999999999   99999999999999999999986    555555544332   266779999988888  566665

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.78  E-value=4.8e-17  Score=149.72  Aligned_cols=193  Identities=21%  Similarity=0.206  Sum_probs=145.4

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecC
Q 021547           64 AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPR  142 (311)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~  142 (311)
                      .+.-.+++.+.+.++.   |.......++|++++++++.        ++.++++|+++|+.+++.++ +++| |+|+++.
T Consensus         9 ~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g~--------~~~v~~~sgt~al~~~l~al~~~~G-d~Viv~~   76 (380)
T TIGR03588         9 DQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVGA--------KYAVAFNSATSALHIACLALGVGPG-DRVWTTP   76 (380)
T ss_pred             CHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHCC--------CeEEEEcCHHHHHHHHHHHcCCCCC-CEEEeCC
Confidence            3455778888776543   33345678999999999943        34566778899999999999 7899 9999999


Q ss_pred             CCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCC
Q 021547          143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGI  218 (311)
Q Consensus       143 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~  218 (311)
                      ++|..+...++..|++++.+++++ +++.+|++++++.++    +++++++++   |++|...+   +++|.++|+++|+
T Consensus        77 ~~~~~~~~~~~~~G~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~~~---~~~i~~l~~~~~~  149 (380)
T TIGR03588        77 ITFVATANCALYCGAKVDFVDIDP-DTGNIDEDALEKKLAAAKGKLPKAIVPV---DFAGKSVD---MQAIAALAKKHGL  149 (380)
T ss_pred             cchHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHhhcccCCCceEEEEe---CCCCccCC---HHHHHHHHHHcCC
Confidence            999999999999999999999754 356799999999998    688888754   46888877   8999999999999


Q ss_pred             EEEEeccccCC-ccCCCCCCcccccCCCCCeEEEecCc--ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547          219 LVIADEVYGHL-AFGSTPYIPMGVFGSIVPVITLGSIS--KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       219 ~li~D~ay~~~-~~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      +||+|++|+.. .+++.+.... .+.    .+.+.|++  |.++.+  .-|+++..++       ++.++++..
T Consensus       150 ~lI~D~a~a~g~~~~~~~~g~~-~~~----d~~~~S~~~~K~~~~~--~GG~v~~~~~-------~~~~~~~~~  209 (380)
T TIGR03588       150 KIIEDASHALGAEYGGKPVGNC-RYA----DATVFSFHPVKIITTA--EGGAVTTNDE-------ELAERMRLL  209 (380)
T ss_pred             EEEEECCCcccCccCCEeCCCc-ccc----ceEEEecCCCCccccc--CceEEEECCH-------HHHHHHHHH
Confidence            99999999863 3444322210 011    27777776  876543  4577777654       356655543

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.78  E-value=1.7e-17  Score=145.80  Aligned_cols=214  Identities=19%  Similarity=0.252  Sum_probs=136.4

Q ss_pred             CCCCC-CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH-H-HHHHHHh-----------cCCCCEEEecCCC
Q 021547           79 MFNCY-APMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV-E-IILTVIT-----------RLGAANILLPRPG  144 (311)
Q Consensus        79 ~~~~Y-~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~-~-~~~~~l~-----------~~g~d~Vl~~~p~  144 (311)
                      +..+| +...|++++|+-+++.+      ++.+++|++..+++-.+ + .+..+++           +.+.-+.|||.|+
T Consensus        60 D~RNY~G~l~Gipe~r~l~a~ll------gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPG  133 (425)
T PF12897_consen   60 DCRNYPGGLDGIPEARELFAELL------GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPG  133 (425)
T ss_dssp             BTTSS-S-SS--HHHHHHHHHHH------TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES-
T ss_pred             cccCCCCccCChHHHHHHHHHHh------CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCC
Confidence            35589 88899999999999999      67899999976665443 3 3333332           1112589999999


Q ss_pred             CcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC--CCccEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHhCCEE
Q 021547          145 WPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD--ENTAAIVII-NPCNPCGNVLTYQHLQKIAETA-RKLGILV  220 (311)
Q Consensus       145 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~-~p~nptG~~~~~~~l~~l~~l~-~~~~~~l  220 (311)
                      |.....+++.+|++.+.||+..+   ++|+|.+++++.  +..|+++.+ .-+||||.++|+|.+++|+++- ...+..|
T Consensus       134 YDRHFai~E~~Giemi~VpM~~d---GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI  210 (425)
T PF12897_consen  134 YDRHFAITEHFGIEMIPVPMTED---GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRI  210 (425)
T ss_dssp             -HHHHHHHHHCT-EEEEEEEETT---EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EE
T ss_pred             chHHHHHHHhhCcEEEecCCCCC---CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEE
Confidence            99999999999999999998643   689999999873  466776543 2389999999999999999983 3569999


Q ss_pred             EEeccccCCccC-CCCCCc-ccc------cCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hc
Q 021547          221 IADEVYGHLAFG-STPYIP-MGV------FGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LG  291 (311)
Q Consensus       221 i~D~ay~~~~~~-~~~~~~-~~~------~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~  291 (311)
                      +.|++|....+. ..+... +.-      -...++++.+.|.||. ..||-+++++.++..        -++.++.. ..
T Consensus       211 ~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~~--------Nl~~~~~~~~~  281 (425)
T PF12897_consen  211 FWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASEA--------NLAWIKKHLSV  281 (425)
T ss_dssp             EEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-HH--------HHHHHHHHHHH
T ss_pred             EeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCHH--------HHHHHHHHhcC
Confidence            999999976663 222111 111      1345679999999999 899999999988653        35555544 33


Q ss_pred             cccCCCchhHHHHHhhhhc
Q 021547          292 VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       292 ~~~~~~~~~q~~~~~~l~~  310 (311)
                      .+.++..++|..-.+++.+
T Consensus       282 ~tIgpdKvNQLRHvrff~d  300 (425)
T PF12897_consen  282 QTIGPDKVNQLRHVRFFKD  300 (425)
T ss_dssp             H-S---HHHHHHHHHHHHS
T ss_pred             ceeCccHHHHHHHHHHhcC
Confidence            4678999999999998876

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.77  E-value=2.4e-17  Score=152.70  Aligned_cols=246  Identities=16%  Similarity=0.071  Sum_probs=155.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.++||..|.-.. ..--.+|.+.+++.+.++....  .... -..+..+.+.+.+.+..+    .+.++++++|++|
T Consensus        29 dg~~~lD~~~~~~~~-~~Gh~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~~~~~l~~~~~----~~~~~~~~SGs~A  100 (400)
T PTZ00125         29 EGKKYYDFLSAYSAV-NQGHCHPKILAALINQAQKLTL--TSRA-FYNDVLGLAEKYITDLFG----YDKVLPMNSGAEA  100 (400)
T ss_pred             CCCEEEEcccCHhhc-cCCcCCHHHHHHHHHHHHhccc--cccc-ccCHHHHHHHHHHHhCCC----CCEEEEeCCcHHH
Confidence            578899998763211 1112578999999998763221  1110 012233444444443322    3689999999999


Q ss_pred             HHHHHHHHhc----------CCCCEEEecCCCCcchHHHHHH-cCcEEEE---eeccCC--CCcccCHHHHHhhcC-CCc
Q 021547          123 VEIILTVITR----------LGAANILLPRPGWPFYESFAKR-NHIEVRH---FDLLPE--RGWEVDLEAVEALAD-ENT  185 (311)
Q Consensus       123 ~~~~~~~l~~----------~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~~---~~~~~~--~~~~~d~~~l~~~l~-~~~  185 (311)
                      ++.++..+..          .+ ++|++.+-.|.+....... .+.....   .+..+.  .-...|++.+++.++ +++
T Consensus       101 ~e~al~~~~~~~~~~~~~~~~~-~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~  179 (400)
T PTZ00125        101 GETALKFARKWGYEVKGIPENQ-AKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNV  179 (400)
T ss_pred             HHHHHHHHHHHHHhccCCCCCC-CeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCe
Confidence            9999987742          23 6788888877765433222 2211100   000000  000138899999886 578


Q ss_pred             cEEEEeCCCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce
Q 021547          186 AAIVIINPCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR  264 (311)
Q Consensus       186 ~~i~i~~p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r  264 (311)
                      +++++..++||+|.+++ .+.+++|.++|++||+++|+||+|.++.+.|..+ ........++++   ++||.++.+++|
T Consensus       180 ~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~-~~~~~~~~pd~~---~~sK~l~~g~~~  255 (400)
T PTZ00125        180 AAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLL-AHDHEGVKPDIV---LLGKALSGGLYP  255 (400)
T ss_pred             EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh-HHHhcCCCCCEE---EEcccccCCCcC
Confidence            88888888999999886 4569999999999999999999998776655422 111111122233   478998765569


Q ss_pred             eeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          265 FGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       265 ~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +||++++.        ++++.+... ...+.+.+++.|+++.+.|+
T Consensus       256 ig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~  293 (400)
T PTZ00125        256 ISAVLAND--------DVMLVIKPGEHGSTYGGNPLACAVAVEALE  293 (400)
T ss_pred             cEEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence            99999854        366666543 33456778888888876553

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.77  E-value=4.2e-17  Score=154.03  Aligned_cols=205  Identities=17%  Similarity=0.144  Sum_probs=148.5

Q ss_pred             cCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC---CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHH
Q 021547           50 LGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCY---APMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEII  126 (311)
Q Consensus        50 ~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y---~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~  126 (311)
                      .+.|.+.    +..+|.+.+++.+...-..++.|   ....|..+++..+.+++.+.+|.+  ...+..++|+.+.+..+
T Consensus        73 ~g~G~~~----~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l  146 (481)
T PRK04366         73 YPLGSCT----MKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGL  146 (481)
T ss_pred             ecCcccC----CCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHH
Confidence            4455533    56678888888765211244577   356788999999999999888853  23344445555444422


Q ss_pred             --HH-HHhcCCCC----EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCcc
Q 021547          127 --LT-VITRLGAA----NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGN  199 (311)
Q Consensus       127 --~~-~l~~~g~d----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~  199 (311)
                        ++ .+.++| |    +|+++.|.|+.+...++..|++++.+++.  .++.+|++.|++.++++++++++++|+ |||.
T Consensus       147 ~~~r~~~~~~G-d~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~  222 (481)
T PRK04366        147 LMIRAYHEARG-DTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGEDTAALMLTNPN-TLGL  222 (481)
T ss_pred             HHHHHHhhccC-cCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhcccCCeEEEEeCCC-Cccc
Confidence              22 334566 5    99999999999999999999999999874  456899999999999899999999988 9996


Q ss_pred             CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC----cceeeEEEeeC
Q 021547          200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP----GWRFGWLATND  272 (311)
Q Consensus       200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~i~~~~  272 (311)
                      .  ..++++|+++|+++|.++++|.++..-.. +.  .....+   +-.++++|.+|.|+.|    |..+|++.+.+
T Consensus       223 ~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~-g~--~~~~~~---GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~  291 (481)
T PRK04366        223 F--ERNILEIAEIVHEAGGLLYYDGANLNAIL-GK--ARPGDM---GFDVVHLNLHKTFSTPHGGGGPGSGPVGVKE  291 (481)
T ss_pred             c--chHHHHHHHHHHHcCCEEEEEecChhhhc-cc--CCcccc---CCCEEEEechhhcCCCCCCCCCCeeeeeehh
Confidence            4  34699999999999999999999863211 11  111222   2348999999998765    45677776643

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.77  E-value=3.3e-17  Score=152.81  Aligned_cols=252  Identities=14%  Similarity=0.115  Sum_probs=160.3

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.++||..|...... --.+|.+.+++.+++..... .+....+.+ ....+++++....+.+.. +.++++++|++
T Consensus        38 ~dG~~~lD~~~g~~~~~l-Gh~~~~i~~a~~~~~~~~~~-~~~~~~~~~-~~~~la~~l~~~~~~~~~-~~~~f~~sGse  113 (425)
T PRK08088         38 VEGREYLDFAGGIAVLNT-GHLHPKVVAAVEAQLKKLSH-TCFQVLAYE-PYLELCEKMNQKVPGDFA-KKTLLVTTGSE  113 (425)
T ss_pred             CCCCEEEEcCCchhhcCC-CCCCHHHHHHHHHHHhhCCC-ccccccCCH-HHHHHHHHHHHhCCCCCC-CEEEEeCCcHH
Confidence            358889999877433221 23578899999999875332 222212233 344777777765543332 46777777788


Q ss_pred             HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcCcEEE--------------EeeccC-CCCccc--CHHHHHhhcC-
Q 021547          122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKRNHIEVR--------------HFDLLP-ERGWEV--DLEAVEALAD-  182 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g~~~~--------------~~~~~~-~~~~~~--d~~~l~~~l~-  182 (311)
                      |++.+++.... .+..+|+...++|.+....+...+....              .++... ..+...  +++.+++.+. 
T Consensus       114 a~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~  193 (425)
T PRK08088        114 AVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKN  193 (425)
T ss_pred             HHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHh
Confidence            88877766542 2225677779999887655554432211              111100 011101  1445777664 


Q ss_pred             ----CCccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCccc
Q 021547          183 ----ENTAAIVIINP-CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR  257 (311)
Q Consensus       183 ----~~~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~  257 (311)
                          ++..++++... +++.....+++.+++|.++|++||+++|+||+|.++.+.+. ...+...   +.+..|.||||.
T Consensus       194 ~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~-~~~~~~~---~~~pdi~s~sK~  269 (425)
T PRK08088        194 DAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGT-LFAMEQM---GVAADLTTFAKS  269 (425)
T ss_pred             ccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc-hhHHhhc---CCCCCEEEEecc
Confidence                23344444433 57777788999999999999999999999999998765543 2222222   223557899999


Q ss_pred             CCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547          258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       258 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++ +|+|+||++++.        ++++.+... ...+++.+++.|+++.++|+.
T Consensus       270 l~-~G~rig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~  314 (425)
T PRK08088        270 IA-GGFPLAGVTGRA--------EVMDAIAPGGLGGTYAGNPIACAAALAVLKV  314 (425)
T ss_pred             cc-CCCcceeeEecH--------HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            86 899999999853        467776654 345678899999999998863

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.76  E-value=1.2e-16  Score=146.41  Aligned_cols=197  Identities=16%  Similarity=0.090  Sum_probs=134.3

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC-------CCC--CCC----CCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-------MFN--CYA----PMFGLPLARRAVAEYLNRDLPYKLSA  110 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~-------~~~--~Y~----~~~g~~~lr~~ia~~l~~~~g~~~~~  110 (311)
                      ..++++|+.++   |..+..++.+.+++.+.+...       ...  +..    ...-+.++|+.++++++.       +
T Consensus         3 ~~~~~~~~s~~---YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~-------~   72 (370)
T PRK05937          3 ESLSIDFVTND---FLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGA-------P   72 (370)
T ss_pred             CCceEEeECCC---ccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCC-------C
Confidence            46799999998   567888888888888877532       111  111    222356788888888842       2


Q ss_pred             CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------C
Q 021547          111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------N  184 (311)
Q Consensus       111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~  184 (311)
                      +.+++++|. .++..++..+.++| |.|++..-.|......++......+.++       ..|+++|++.++.      +
T Consensus        73 ~~l~~~sG~-~a~~~~~~~~~~~~-d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~  143 (370)
T PRK05937         73 EAFIVPSGY-MANLGLCAHLSSVT-DYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFG  143 (370)
T ss_pred             eEEEECChH-HHHHHHHHHhCCCC-CEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCC
Confidence            235555555 56666666666778 8888888888877777666543333332       2478888887752      3


Q ss_pred             ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547          185 TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPG  262 (311)
Q Consensus       185 ~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G  262 (311)
                      ++++++++++|++|.+.|   +++|.++|+++|+++++|++|+...++  +....  ..+......+.+.|+||.+|..|
T Consensus       144 ~~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~--~~~~~~~~~~~~~tlsK~~g~~G  218 (370)
T PRK05937        144 RIFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFC--HSLGYENFYAVLVTYSKALGSMG  218 (370)
T ss_pred             cEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchH--HhhCCCCCcEEEEechhhhhcCc
Confidence            556678899999999999   899999999999999999999863332  21110  11111112367889999998878


Q ss_pred             ce
Q 021547          263 WR  264 (311)
Q Consensus       263 ~r  264 (311)
                      .+
T Consensus       219 ~~  220 (370)
T PRK05937        219 AA  220 (370)
T ss_pred             eE
Confidence            33

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.76  E-value=7.3e-17  Score=146.80  Aligned_cols=185  Identities=19%  Similarity=0.202  Sum_probs=140.0

Q ss_pred             HHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecCCCCcc
Q 021547           69 DAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPRPGWPF  147 (311)
Q Consensus        69 ~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~p~~~~  147 (311)
                      +++.+.+.++.   |.......++++.++++++        .+++++++|+++++..++.++ .++| |+|+++.++|..
T Consensus         3 ~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~g-d~vl~~~~~~~~   70 (352)
T cd00616           3 EAVEEVLDSGW---LTLGPKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPG-DEVIVPSFTFVA   70 (352)
T ss_pred             HHHHHHHHcCC---ccCCHHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCC-CEEEeCCcchHH
Confidence            45566665543   3333467899999999993        356888889999999999998 5899 999999999999


Q ss_pred             hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 021547          148 YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG  227 (311)
Q Consensus       148 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~  227 (311)
                      +...+...|.+++.+++.. .++.+|++.+++.++++++++++++   ++|...+   +++|.++|+++|+++|+|++|+
T Consensus        71 ~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~---~~~i~~l~~~~~i~li~D~a~~  143 (352)
T cd00616          71 TANAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPVH---LYGNPAD---MDAIMAIAKRHGLPVIEDAAQA  143 (352)
T ss_pred             HHHHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCC---HHHHHHHHHHcCCeEEEECCCC
Confidence            9999999999999998753 3678899999999988899888764   6898877   8889999999999999999998


Q ss_pred             CC-ccCCCCCCcccccCCCCCeEEEecCc--ccCCCCcceeeEEEeeCCCCccchhhHHHHHhh
Q 021547          228 HL-AFGSTPYIPMGVFGSIVPVITLGSIS--KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA  288 (311)
Q Consensus       228 ~~-~~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~  288 (311)
                      .. .+.+.   .+..+    ..+.+.|++  |.+  ++.+.|+++..++       ++.++++.
T Consensus       144 ~g~~~~~~---~~~~~----~d~~~~S~~~~K~~--~~~~gg~~~~~~~-------~~~~~~~~  191 (352)
T cd00616         144 LGATYKGR---KVGTF----GDAGAFSFHPTKNL--TTGEGGAVVTNDE-------ELAERARL  191 (352)
T ss_pred             CCCeECCE---EcccC----cceeEEcCCCCCCC--cccCceEEEECCH-------HHHHHHHH
Confidence            53 22221   11111    126677766  876  4445688887653       35555554

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.76  E-value=2.4e-16  Score=146.97  Aligned_cols=207  Identities=19%  Similarity=0.186  Sum_probs=146.2

Q ss_pred             ecCCCCCCCCCCC-CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHH
Q 021547           49 PLGHGDPAAFPCF-RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIIL  127 (311)
Q Consensus        49 ~~~~g~p~~~~~~-~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~  127 (311)
                      .|+.|.|...... ..++.-.+++.+.+.+... .+++  ...+|++++++++.        .+++++++|+++++.+++
T Consensus        27 ~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~-~~G~--~~~~fe~~lA~~~g--------~~~~v~~~sGt~al~~aL   95 (438)
T PRK15407         27 PFVPGKSPIPPSGKVIDAKELQNLVDASLDFWL-TTGR--FNDAFEKKLAEFLG--------VRYALLVNSGSSANLLAF   95 (438)
T ss_pred             cccCCCCCCCcCccCCCHHHHHHHHHHHHhCcc-cCCh--hHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHH
Confidence            3688876532211 1223333444444443222 2222  35789999999994        346999999999999988


Q ss_pred             HHH---------hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCc
Q 021547          128 TVI---------TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCG  198 (311)
Q Consensus       128 ~~l---------~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG  198 (311)
                      .++         +++| |+|+++.++|..+...+...|++++.+++++ .++.+|++.+++.+++++++|+++++   +|
T Consensus        96 ~al~~~~~~~~~~~pG-d~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~---~G  170 (438)
T PRK15407         96 SALTSPKLGDRALKPG-DEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT---LG  170 (438)
T ss_pred             HHHhhccccccCCCCC-CEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC---CC
Confidence            876         3689 9999999999999999999999999998754 46789999999999989999998875   34


Q ss_pred             cCCCHHHHHHHHHHHHHhCCEEEEeccccCC-ccCCCCCCcccccCCCCCeEEEecCc--ccCCCCcceeeEEEeeCCCC
Q 021547          199 NVLTYQHLQKIAETARKLGILVIADEVYGHL-AFGSTPYIPMGVFGSIVPVITLGSIS--KRWIVPGWRFGWLATNDPNG  275 (311)
Q Consensus       199 ~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~-~~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~i~~~~~~~  275 (311)
                      ...   ++++|.++|+++|++||+|++|+.. .++|....+   +.+    +.+.||+  |.+.. |- -|++++++++ 
T Consensus       171 ~p~---dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~---~gd----~~~fSf~~~k~~~~-ge-GG~l~t~d~~-  237 (438)
T PRK15407        171 NPF---DLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGT---FGD----IATLSFYPAHHITM-GE-GGAVFTNDPL-  237 (438)
T ss_pred             Chh---hHHHHHHHHHHCCCEEEEECccchhhhcCCeeeec---cCc----eEEEeCCCCCCccc-cC-ceEEEECCHH-
Confidence            433   4899999999999999999999853 345543322   221    5566665  55432 33 4898887653 


Q ss_pred             ccchhhHHHHHhhhh
Q 021547          276 VLQKSGIVGSIKACL  290 (311)
Q Consensus       276 ~~~~~~~~~~~~~~~  290 (311)
                            +.++++.+.
T Consensus       238 ------l~~~~~~~~  246 (438)
T PRK15407        238 ------LKKIIESFR  246 (438)
T ss_pred             ------HHHHHHHHH
Confidence                  555555543

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.76  E-value=1.7e-16  Score=147.48  Aligned_cols=160  Identities=19%  Similarity=0.127  Sum_probs=126.7

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~  162 (311)
                      +....|++.++++.+        .+..+++++|+.|+.+++.+++++| |+|+++...|.+...    .+...|++++.+
T Consensus        69 p~~~~Le~~lA~l~g--------~~~av~~sSG~aAi~~al~all~~G-d~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~v  139 (436)
T PRK07812         69 PTQDVVEQRIAALEG--------GVAALLLASGQAAETFAILNLAGAG-DHIVSSPRLYGGTYNLFHYTLPKLGIEVSFV  139 (436)
T ss_pred             chHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCC-CEEEEeCCcchHHHHHHHHHhhcCeEEEEEE
Confidence            345678888888873        3457888888999999999999999 999999988887543    344577777776


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      + +.     .|++.+++.+++++++|++.+|+||+|.+.+   +++|.++|+++|+++|+|++++.-.    ...++. +
T Consensus       140 d-d~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~----~~~pl~-~  205 (436)
T PRK07812        140 E-DP-----DDLDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPY----LIRPLE-H  205 (436)
T ss_pred             C-CC-----CCHHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccc----cCCchh-c
Confidence            4 11     2889999999999999999999999999999   9999999999999999999987421    112221 1


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                         +-.+++.|++|.++.+|--+|++++..
T Consensus       206 ---GaDivv~S~tK~lgg~G~~i~G~vv~~  232 (436)
T PRK07812        206 ---GADIVVHSATKYLGGHGTAIAGVIVDG  232 (436)
T ss_pred             ---CCCEEEEecccccCCCCCeEEEEEEcC
Confidence               223888999999999988888888753

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.76  E-value=1.8e-16  Score=145.67  Aligned_cols=243  Identities=17%  Similarity=0.143  Sum_probs=163.4

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCM  120 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~  120 (311)
                      .+++.++||..|.-.  ..++.+|.+.+++.+++....  .+. .....++++.+++.+..      ..+ .++++++++
T Consensus        26 ~dg~~~lD~~s~~~~--~~lG~~p~v~~a~~~~~~~~~--~~~-~~~~~~~~~~la~~l~~------~~~~~~~~~~SGs   94 (375)
T PRK04260         26 TDGKKYLDFSSGIGV--TNLGFHPQVQQALQKQAGLIW--HSP-NLYLNSLQEEVAQKLIG------DKDYLAFFCNSGA   94 (375)
T ss_pred             CCCCEEEECCCCccc--ccCCCCHHHHHHHHHHHHhcC--ccc-CccCCHHHHHHHHHHhc------CcCCEEEEcCccH
Confidence            357889999877321  234557889999999886422  222 22346788899988743      123 468899999


Q ss_pred             HHHHHHHHHHh--cCCCCEEEecCCCCcchH-HHHHHcCcEEEE--e--eccCCC-CcccCHHHHHhhcCCCccEEEEeC
Q 021547          121 EAVEIILTVIT--RLGAANILLPRPGWPFYE-SFAKRNHIEVRH--F--DLLPER-GWEVDLEAVEALADENTAAIVIIN  192 (311)
Q Consensus       121 ~a~~~~~~~l~--~~g~d~Vl~~~p~~~~~~-~~~~~~g~~~~~--~--~~~~~~-~~~~d~~~l~~~l~~~~~~i~i~~  192 (311)
                      +++..+++...  ..+ ++|++....|.+.. ......+.+...  .  .+.... ....|++.+++.+++++.++++..
T Consensus        95 eA~~~Al~~ar~~~~~-~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~~~a~vi~e~  173 (375)
T PRK04260         95 EANEAAIKIARKATGK-QEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLEL  173 (375)
T ss_pred             HHHHHHHHHHHHhcCC-CeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCCCeEEEEECC
Confidence            99998888764  234 78998888877532 333222221100  0  000000 001378999998877888888889


Q ss_pred             CCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          193 PCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       193 p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      ++|++|...+ .+.++++.++|+++|+++|+||+|.++...|..+ ........++   +.||||.++ +|+|+||++++
T Consensus       174 v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~  248 (375)
T PRK04260        174 VQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY-AFEHYGIEPD---IFTLAKGLA-NGVPVGAMLAK  248 (375)
T ss_pred             eECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhHhhCCCCC---EEEeccccc-CCcceEEEEEc
Confidence            9999999754 5679999999999999999999998876555322 2112222223   338999975 79999999996


Q ss_pred             CCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          272 DPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .        ++.+.+... ...++..++++|+++.+.|+
T Consensus       249 ~--------~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~  279 (375)
T PRK04260        249 S--------SLGGAFGYGSHGSTFGGNKLSMAAASATLD  279 (375)
T ss_pred             H--------HHHhhcCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            4        366666543 33456779999999988874

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.75  E-value=4.9e-16  Score=142.56  Aligned_cols=191  Identities=25%  Similarity=0.264  Sum_probs=145.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCCC----CCCC----CCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHHHHHHHHHHH-
Q 021547           61 FRTAAVAEDAIVDSVRSSMFN----CYAP----MFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCMEAVEIILTVI-  130 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~----~Y~~----~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~a~~~~~~~l-  130 (311)
                      .+.|+.+.+++.+.+......    .+..    ..-+.++|+.++++++      +++ ++|++++|++.+++.++.++ 
T Consensus         9 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg------~~~~~~v~~~~~~t~a~~~~~~~l~   82 (371)
T PF00266_consen    9 GPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLG------APPDEEVVFTSNGTEALNAVASSLL   82 (371)
T ss_dssp             -B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHT------SSTTEEEEEESSHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcC------Cccccccccccccchhhhhhhhccc
Confidence            367889999999887532111    1111    1123467788888884      455 78999999999999999999 


Q ss_pred             --hcCCCCEEEecCCCCcchH----HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547          131 --TRLGAANILLPRPGWPFYE----SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ  204 (311)
Q Consensus       131 --~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~  204 (311)
                        .++| ++|++....|++..    ...+..|+++..++...  +..+|++.+++.++++++++++++..|.+|...|  
T Consensus        83 ~~~~~g-~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~--~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p--  157 (371)
T PF00266_consen   83 NPLKPG-DEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADP--GGSLDLEDLEEALNPDTRLVSISHVENSTGVRNP--  157 (371)
T ss_dssp             HHGTTT-CEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGT--TSSCSHHHHHHHHHTTESEEEEESBETTTTBBSS--
T ss_pred             cccccc-cccccccccccccccccccccccchhhhccccccc--cchhhhhhhhhhhccccceEEeecccccccEEee--
Confidence              6889 99999999998654    45567899999998753  3468999999999999999999999999999999  


Q ss_pred             HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                       +++|.++|+++|+++++|.+++...    -...+..++   ..+++.|..|.+|.+|  +|++.+++
T Consensus       158 -i~~I~~~~~~~~~~~~vD~~~~~g~----~~id~~~~~---~D~~~~s~~Kl~gp~G--~g~l~v~~  215 (371)
T PF00266_consen  158 -IEEIAKLAHEYGALLVVDAAQSAGC----VPIDLDELG---ADFLVFSSHKLGGPPG--LGFLYVRP  215 (371)
T ss_dssp             -HHHHHHHHHHTTSEEEEE-TTTTTT----SS--TTTTT---ESEEEEESTSTTSSST--EEEEEEEH
T ss_pred             -eceehhhhhccCCceeEechhcccc----ccccccccc---cceeeecccccCCCCc--hhhheehh
Confidence             9999999999999999999999622    223333332   2389999999545455  68888864

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.74  E-value=2e-16  Score=144.68  Aligned_cols=188  Identities=12%  Similarity=0.089  Sum_probs=141.3

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~  162 (311)
                      +....|++.++++-        ..+..+++++|++|+.+++.+++++| |+|+++...|.+....    ++..|+++..+
T Consensus        62 Pt~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~G-D~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~v  132 (395)
T PRK08114         62 LTHFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQG-DHVLMTGTAYEPTQDFCSKILSKLGVTTTWF  132 (395)
T ss_pred             hhHHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCC-CEEEEeCCCcHHHHHHHHHHHHhcCcEEEEE
Confidence            34566777777765        45678888889999999999999999 9999999999776544    46789998887


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC--CEEEEeccccCCccCCCCCCccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG--ILVIADEVYGHLAFGSTPYIPMG  240 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~--~~li~D~ay~~~~~~~~~~~~~~  240 (311)
                      +.       .|.+.+++.+++++++|++.+|.||+|.+.+   +++|+++|++++  +++++|++++.-..    ..++ 
T Consensus       133 d~-------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~----~~pl-  197 (395)
T PRK08114        133 DP-------LIGADIAKLIQPNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL----FKAL-  197 (395)
T ss_pred             CC-------CCHHHHHHhcCCCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc----cCHH-
Confidence            64       3778999999999999999999999999999   999999999984  99999999985221    1111 


Q ss_pred             ccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          241 VFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       241 ~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .+   +-.|+++|.+|.++.+| .-.|.++. ++       ++++.++.. .......+++..+.+.+-|+
T Consensus       198 ~~---GaDivv~S~tKyl~Ghsdv~~G~v~~-~~-------~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~  257 (395)
T PRK08114        198 DF---GIDISIQAGTKYLVGHSDAMIGTAVA-NA-------RCWEQLRENSYLMGQMVDADTAYMTSRGLR  257 (395)
T ss_pred             Hc---CCcEEEEcCcccccCCCcceeEEEEc-CH-------HHHHHHHHHHHhccCCCCHHHHHHHHcCCC
Confidence            12   23399999999988887 56665543 32       244444433 23455777777776655443

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.73  E-value=6.1e-16  Score=143.11  Aligned_cols=248  Identities=15%  Similarity=0.088  Sum_probs=162.6

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.++||..|.-... .--.+|.+.+++.+++....  .+... -..+....+++.+....+   ..+.++++++|++
T Consensus        37 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~--~~~~~-~~~~~~~~la~~L~~~~~---~~~~v~f~~sGse  109 (408)
T PRK04612         37 DQGREYLDLAAGIAVCG-LGHNDPDLVAALTEQAGKLW--HTSNV-FYSAPPLKLAEELVTASR---FAEKVFLCNSGTE  109 (408)
T ss_pred             CCCCEEEEcCccHhhcc-CCCCCHHHHHHHHHHHHhcc--ccccc-cCCHHHHHHHHHHHhhCC---CCCEEEEcCchHH
Confidence            35889999987732111 12357899999999887432  12211 123344556666654332   1268999999999


Q ss_pred             HHHHHHHHHhc--------CCCCEEEecCCCCcchHHHHHH-cCcEEEE---eeccCC--CCcccCHHHHHhhcCCCccE
Q 021547          122 AVEIILTVITR--------LGAANILLPRPGWPFYESFAKR-NHIEVRH---FDLLPE--RGWEVDLEAVEALADENTAA  187 (311)
Q Consensus       122 a~~~~~~~l~~--------~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~~---~~~~~~--~~~~~d~~~l~~~l~~~~~~  187 (311)
                      |++.+++....        +++.+|+....+|.+....+.. .+.....   -+..+.  .-...|.+.+++.+..+..+
T Consensus       110 A~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~a  189 (408)
T PRK04612        110 ANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVA  189 (408)
T ss_pred             HHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEE
Confidence            99998877642        2325788888888775433322 2211100   000000  00112788888888767788


Q ss_pred             EEEeCCCCCCccCCC--HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCccee
Q 021547          188 IVIINPCNPCGNVLT--YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF  265 (311)
Q Consensus       188 i~i~~p~nptG~~~~--~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~  265 (311)
                      .++..|.+++|.+++  ++.+++|.++|++||+++|+||+|.++...|..+ ..   ...+.+..+.++||.++ +|+|+
T Consensus       190 avi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-a~---~~~~~~pdi~t~~K~l~-~G~pi  264 (408)
T PRK04612        190 AVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLF-AH---WQEQVTPDIVTLAKALG-GGFPI  264 (408)
T ss_pred             EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchh-hh---hhcCCCCCEEEEcchhc-CCCce
Confidence            888888877776655  6689999999999999999999999876655321 11   12233467789999986 79999


Q ss_pred             eEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          266 GWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       266 G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ||+++++        ++++.+... ...+++.++++++++.+.|+
T Consensus       265 ga~~~~~--------~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~  301 (408)
T PRK04612        265 GAMLAGP--------KVAETMQFGAHGTTFGGNPLAAAVARVALR  301 (408)
T ss_pred             EEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHHH
Confidence            9998753        355555543 34456789999999988875

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.73  E-value=4.1e-16  Score=140.06  Aligned_cols=192  Identities=19%  Similarity=0.211  Sum_probs=153.0

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecC
Q 021547           64 AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPR  142 (311)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~  142 (311)
                      ..+-.+++.+.++++.+..   .+-..++++++++|+        ...+.+.++++|.|+.+++++| +++| |+|++++
T Consensus        14 ~~~e~~~v~~vl~sg~i~~---G~~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~G-DeVI~ps   81 (374)
T COG0399          14 GEEELAAVQEVLKSGWLTG---GPFVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPG-DEVIVPS   81 (374)
T ss_pred             chHHHHHHHHHHHcCCeec---ChHHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCC-CEEEecC
Confidence            4677888899998876533   335789999999999        5568899999999999999976 4899 9999999


Q ss_pred             CCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547          143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP-CNPCGNVLTYQHLQKIAETARKLGILVI  221 (311)
Q Consensus       143 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~~~~li  221 (311)
                      -+|......+...|++++++++++ +.+.+|++.+|+++++++|+|+.++- .+|.    +   +++|.++|++||++||
T Consensus        82 ~TfvATan~i~~~Ga~PVFvDid~-~T~nid~~~ie~aIt~~tKAIipVhl~G~~~----d---m~~i~~la~~~~l~vI  153 (374)
T COG0399          82 FTFVATANAVLLVGAKPVFVDIDP-DTLNIDPDLIEAAITPRTKAIIPVHLAGQPC----D---MDAIMALAKRHGLPVI  153 (374)
T ss_pred             CchHHHHHHHHHcCCeEEEEecCC-cccCCCHHHHHHHcccCCeEEEEehhccCCC----C---HHHHHHHHHHcCCeEE
Confidence            999999999999999999999865 56789999999999999999998775 4444    4   9999999999999999


Q ss_pred             EeccccC-CccCCCCCCcccccCCCCCeEEEecC--cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc
Q 021547          222 ADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSI--SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG  291 (311)
Q Consensus       222 ~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  291 (311)
                      +|.+++. ..|.|+...++..       +-+.||  +|.+...  --|.++.+|+       ++.++++.+..
T Consensus       154 EDaAqa~Ga~y~gk~vGt~Gd-------~~~fSF~~~K~ittg--EGGav~tnd~-------ela~k~~~lr~  210 (374)
T COG0399         154 EDAAQAHGATYKGKKVGSFGD-------IGAFSFHATKNLTTG--EGGAVVTNDE-------ELAEKARSLRN  210 (374)
T ss_pred             EEcchhccCeecCcccccccc-------eEEEEecCCCCcccc--CceEEEeCCH-------HHHHHHHHHHH
Confidence            9999985 4566765444432       555565  5665433  4588887664       47777776543

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.73  E-value=2.5e-16  Score=144.00  Aligned_cols=193  Identities=24%  Similarity=0.283  Sum_probs=142.9

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-cCCCCEEEecCC
Q 021547           65 AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-RLGAANILLPRP  143 (311)
Q Consensus        65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~g~d~Vl~~~p  143 (311)
                      ++-.+++.+.+.++....+  ..-..++++.+++++        ..++++.++++|.|+.+++.++- ++| |+|+++..
T Consensus         5 ~e~~~~v~~~l~s~~~~~~--g~~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~g-deVi~p~~   73 (363)
T PF01041_consen    5 EEEIDAVLEVLRSGWLSTY--GPYVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPG-DEVIVPAY   73 (363)
T ss_dssp             HHHHHHHHHHHHHTCCSSS--SHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTT-SEEEEESS
T ss_pred             HHHHHHHHHHHHhCCccCC--CHHHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcC-ceEecCCC
Confidence            4566777888877644333  335789999999999        45789999999999999999985 689 99999999


Q ss_pred             CCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547          144 GWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD  223 (311)
Q Consensus       144 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D  223 (311)
                      +|..+...+...|++++.+++++ +++.+|++.+++.+++++++|++++.   .|...   ++.+|.++|+++|++||+|
T Consensus        74 t~~~~~~ai~~~G~~pv~~Di~~-~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~~---d~~~i~~~~~~~~i~lIeD  146 (363)
T PF01041_consen   74 TFPATASAILWAGAEPVFVDIDP-ETLNIDPEALEKAITPKTKAILVVHL---FGNPA---DMDAIRAIARKHGIPLIED  146 (363)
T ss_dssp             S-THHHHHHHHTT-EEEEE-BET-TTSSB-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHHHHHHHTT-EEEEE
T ss_pred             cchHHHHHHHHhccEEEEEeccC-CcCCcCHHHHHHHhccCccEEEEecC---CCCcc---cHHHHHHHHHHcCCcEEEc
Confidence            99999999999999999999864 57799999999999999999998875   23333   4999999999999999999


Q ss_pred             ccccCC-ccCCCCCCcccccCCCCCeEEEecC--cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc
Q 021547          224 EVYGHL-AFGSTPYIPMGVFGSIVPVITLGSI--SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG  291 (311)
Q Consensus       224 ~ay~~~-~~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  291 (311)
                      .+++.. .+.|+...+   +.    .+.+.||  +|.+  +.-.-|+|+++++       ++.++++.+..
T Consensus       147 ~a~a~g~~~~g~~~G~---~g----d~~~fSf~~~K~i--~~geGG~v~~~~~-------~~~~~~~~~~~  201 (363)
T PF01041_consen  147 AAQAFGARYKGRPVGS---FG----DIAIFSFHPTKII--TTGEGGAVVTNDP-------ELAERARALRN  201 (363)
T ss_dssp             -TTTTT-EETTEETTS---SS----SEEEEESSTTSSS---SSS-EEEEESTH-------HHHHHHHHHTB
T ss_pred             cccccCceeCCEeccC---CC----CceEecCCCCCCC--cCCCCeeEEecHH-------HHHHHhhhhhc
Confidence            999964 334433222   22    2777787  5775  3333488888764       47777776644

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.73  E-value=1.8e-16  Score=147.85  Aligned_cols=245  Identities=17%  Similarity=0.108  Sum_probs=159.8

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .++++++||..|.+....+ ..+|.+.+++.++++... ..|....+..+|.+.+++.+    .   ..+.+++++|+++
T Consensus        47 ~dG~~~lD~~~g~~~~~lG-h~~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGse  117 (426)
T PRK00062         47 VDGNEYIDYVGSWGPMILG-HAHPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELV----P---SIEMVRMVNSGTE  117 (426)
T ss_pred             CCCCEEEEcccchhhhhcC-CCCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHH
Confidence            3588999999885433222 378999999999987643 23444445555666665554    1   2468999999999


Q ss_pred             HHHHHHHHHhcC-CCCEEEecCCCCcchHHHHHHc-Cc-------E-----EEEeeccCCCCcccCHHHHHhhcC---CC
Q 021547          122 AVEIILTVITRL-GAANILLPRPGWPFYESFAKRN-HI-------E-----VRHFDLLPERGWEVDLEAVEALAD---EN  184 (311)
Q Consensus       122 a~~~~~~~l~~~-g~d~Vl~~~p~~~~~~~~~~~~-g~-------~-----~~~~~~~~~~~~~~d~~~l~~~l~---~~  184 (311)
                      |++.+++..... |.++|+...+.|+++...+... +.       .     ...+......-...|++.+++.+.   ++
T Consensus       118 A~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~  197 (426)
T PRK00062        118 ATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDE  197 (426)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCc
Confidence            999999986543 3388999999999875332221 10       0     000000000000126788888764   35


Q ss_pred             ccEEEEeCCCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547          185 TAAIVIINPCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW  263 (311)
Q Consensus       185 ~~~i~i~~p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~  263 (311)
                      +.++++......+|.+.+ .+.+++|.++|++||+++|+||+|.++.+++ . .....++..++   +.+++|.++ .|+
T Consensus       198 ~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~-~-~~~~~~~~~pD---i~~~gK~l~-~G~  271 (426)
T PRK00062        198 IAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL-G-GAQGYYGVTPD---LTTLGKIIG-GGL  271 (426)
T ss_pred             EEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC-c-cHHHHhCCCcc---hHhhhhHhh-CCC
Confidence            556666655556888776 7889999999999999999999999874432 1 11122222222   358999986 789


Q ss_pred             eeeEEEeeCCCCccchhhHHHHHhh---h-hccccCCCchhHHHHHhhhh
Q 021547          264 RFGWLATNDPNGVLQKSGIVGSIKA---C-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       264 r~G~i~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++|+++++.        ++++.+..   . ...+++.++++++++.+.|+
T Consensus       272 p~ga~~~~~--------~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~  313 (426)
T PRK00062        272 PVGAFGGRR--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLK  313 (426)
T ss_pred             cceeeeEHH--------HHHHhhccCCCceecccCcCCHHHHHHHHHHHH
Confidence            999998753        46776642   2 22346789999998887764

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.72  E-value=1.5e-15  Score=141.89  Aligned_cols=251  Identities=14%  Similarity=0.124  Sum_probs=158.7

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.++||..|--... .--.+|.+.+++.+++....  .+.......+.+..+++.|.+..+.  ..+.++++++|+
T Consensus        37 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~--~~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGs  111 (443)
T PRK08360         37 DIEGNEYIDFLSDAAVQN-VGHNNPRVVKAIKEQTDKLI--HYTPIYGFPVEPLLLAEKLIEIAPG--DNPKVSFGLSGS  111 (443)
T ss_pred             ECCCCEEEEccccHhhcc-cCCCCHHHHHHHHHHHHhcc--CccccccCcHHHHHHHHHHHHhCCC--CCCEEEEcCCHH
Confidence            346889999987721111 12357899999999987432  1222112234455566666554332  225899999999


Q ss_pred             HHHHHHHHHHhc-CCCCEEEecCCCCcchHHH-HHHcCc------------EEEEeeccCCC--Ccc--------cCHHH
Q 021547          121 EAVEIILTVITR-LGAANILLPRPGWPFYESF-AKRNHI------------EVRHFDLLPER--GWE--------VDLEA  176 (311)
Q Consensus       121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~-~~~~g~------------~~~~~~~~~~~--~~~--------~d~~~  176 (311)
                      +|++.+++.... .|+.+|+.....|.+.... ....+.            .+..++.....  .+.        -+++.
T Consensus       112 EAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (443)
T PRK08360        112 DANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEY  191 (443)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHH
Confidence            999998887643 4546788887777764322 221221            12222211100  000        12334


Q ss_pred             HHhhcC-----CCccEEEEeCCCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547          177 VEALAD-----ENTAAIVIINPCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT  250 (311)
Q Consensus       177 l~~~l~-----~~~~~i~i~~p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  250 (311)
                      +++.+.     +++.++++...+||+|..++ .+.+++|.++|++||+++|+||+|.++.+.|..+ ....++..++++ 
T Consensus       192 ~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~-a~~~~~~~pDii-  269 (443)
T PRK08360        192 IKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDII-  269 (443)
T ss_pred             HHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch-hhhhcCCCCCEE-
Confidence            555442     35666666654799999887 5579999999999999999999999887666422 222233233444 


Q ss_pred             EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                        ++||.++ +|+|+||++++.        ++++.+... ...+.+.++++|+++.+.|+
T Consensus       270 --tlsK~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~  318 (443)
T PRK08360        270 --TLGKPLG-GGLPISATIGRA--------EIMDSLPPLAHAFTLSGNPVASAAALAVIE  318 (443)
T ss_pred             --Eeccccc-CCceeEEEEEcH--------HHHhhhcCCCCCCCCCcCHHHHHHHHHHHH
Confidence              6799987 899999999853        367776544 34567789999998888775

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.72  E-value=7.3e-16  Score=140.66  Aligned_cols=188  Identities=22%  Similarity=0.207  Sum_probs=134.3

Q ss_pred             cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEeec
Q 021547           89 LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHFDL  164 (311)
Q Consensus        89 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~  164 (311)
                      ...+++++++..        ..+.++++++|+.|+.+++.+++++| |+|+++...|.+....+    ...|+++..++.
T Consensus        57 ~~~le~~la~Le--------~g~~a~~~~SGmaAi~~~l~~ll~~G-d~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~  127 (386)
T PF01053_consen   57 VRALEQRLAALE--------GGEDALLFSSGMAAISAALLALLKPG-DHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP  127 (386)
T ss_dssp             HHHHHHHHHHHH--------T-SEEEEESSHHHHHHHHHHHHS-TT-BEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST
T ss_pred             HHHHHHHHHHhh--------cccceeeccchHHHHHHHHHhhcccC-CceEecCCccCcchhhhhhhhcccCcEEEEeCc
Confidence            456777777776        34679999999999999999999999 99999999998865444    447899888864


Q ss_pred             cCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC-CEEEEeccccCCccCCCCCCcccccC
Q 021547          165 LPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG-ILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       165 ~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~-~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                             .|++++++++++++++|++.+|.||+..+.+   +++++++|+++| +++++|++++...+    ..++. +.
T Consensus       128 -------~d~~~l~~~l~~~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~----~~pL~-~G  192 (386)
T PF01053_consen  128 -------TDLEALEAALRPNTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYN----QNPLE-LG  192 (386)
T ss_dssp             -------TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTT----C-GGG-GT
T ss_pred             -------hhHHHHHhhccccceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceee----eccCc-CC
Confidence                   3899999999999999999999999988887   999999999998 99999999986321    12222 21


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhh
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  308 (311)
                         -.|++.|++|.++..|--+|-+++.+.     +.++.++++... ......+++..+.+.+-|
T Consensus       193 ---aDivv~S~TKyl~Ghsdv~~G~vv~~~-----~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl  250 (386)
T PF01053_consen  193 ---ADIVVHSATKYLSGHSDVMGGAVVVNG-----SSELYDRLREFRRLLGATLSPFDAWLLLRGL  250 (386)
T ss_dssp             ----SEEEEETTTTTTTSSSE-EEEEEESS-----HHHHHHHHHHHHHHHT-B--HHHHHHHHHHH
T ss_pred             ---ceEEEeeccccccCCcceeeEEEEECc-----hhhhhhhhcchhhhcCccchHHHHHHHhcCC
Confidence               239999999998877655444444332     124666666553 344566666666555544

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.72  E-value=9.1e-16  Score=142.73  Aligned_cols=250  Identities=17%  Similarity=0.130  Sum_probs=159.3

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.++||..|.-... .--.+|.+.+++.+++.......+..  ...+.+..+++.+.+..+. ...+.++++++++
T Consensus        36 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGs  111 (421)
T PRK09792         36 DVEGNEYIDFAAGIAVLN-TGHRHPDLVAAVEQQLQQFTHTAYQI--VPYESYVTLAEKINALAPV-SGQAKTAFFTTGA  111 (421)
T ss_pred             eCCCCEEEEccCchhhhc-CCCCCHHHHHHHHHHHHhccCcccCc--cCCHHHHHHHHHHHHhCCC-CCCceEEEeCChH
Confidence            345888999976632211 12357899999999987432211211  1233444566666543321 1225789999999


Q ss_pred             HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCc-------------EEEEeeccCCCCccc----CHHHHHhhc
Q 021547          121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHI-------------EVRHFDLLPERGWEV----DLEAVEALA  181 (311)
Q Consensus       121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~~~~~----d~~~l~~~l  181 (311)
                      +|++.+++.... .|..+|+....+|.+....+.. .+.             .+..++..... ..+    +++.+++.+
T Consensus       112 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~  190 (421)
T PRK09792        112 EAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLF  190 (421)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHH
Confidence            999988887753 4546888888888765432222 121             12222221111 111    246777766


Q ss_pred             C-----CCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547          182 D-----ENTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS  255 (311)
Q Consensus       182 ~-----~~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s  255 (311)
                      .     ++..++++...++++|..+ +++.+++|.++|++||+++|+||++.++.+.|.. ..+..++..+.   |.+++
T Consensus       191 ~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD---i~t~g  266 (421)
T PRK09792        191 KSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYADKPD---LMTMA  266 (421)
T ss_pred             HhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCCCCc---EEEee
Confidence            4     3455666666689999865 8999999999999999999999999998777643 34444433333   56999


Q ss_pred             ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhh
Q 021547          256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l  308 (311)
                      |.++ +|+|+||++++.        ++++.+... ...++..++++|+++.+.|
T Consensus       267 K~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~l  311 (421)
T PRK09792        267 KSLA-GGMPLSGVVGNA--------NIMDAPAPGGLGGTYAGNPLAVAAAHAVL  311 (421)
T ss_pred             hhhc-CCCceEEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHH
Confidence            9975 899999998853        356655433 3356788999999555444

>PLN02624 ornithine-delta-aminotransferase

Probab=99.72  E-value=6.8e-16  Score=145.46  Aligned_cols=239  Identities=16%  Similarity=0.066  Sum_probs=154.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC-CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC-YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      ++..++||..|.-.. ..--.+|.+.+++.+++....... +.......++.+.+++++    +    .+.++++++|++
T Consensus        73 dG~~ylD~~sg~~~~-~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~----~----~~~~~f~~SGse  143 (474)
T PLN02624         73 EGKKYLDFLSAYSAV-NQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF----G----YDMVLPMNTGAE  143 (474)
T ss_pred             CCCEEEEcccchhcc-cCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc----C----CCeEEEeCChHH
Confidence            478888997763221 112358999999999987432211 111223344555555543    2    358999999999


Q ss_pred             HHHHHHHHHhc---------CCCCEEEecCCCCcchHHHHHHcCcE-------------EEEeeccCCCCcccCHHHHHh
Q 021547          122 AVEIILTVITR---------LGAANILLPRPGWPFYESFAKRNHIE-------------VRHFDLLPERGWEVDLEAVEA  179 (311)
Q Consensus       122 a~~~~~~~l~~---------~g~d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~  179 (311)
                      |++.+++....         ++...|+....+|.+....+......             +..++.       -|++.+++
T Consensus       144 A~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~  216 (474)
T PLN02624        144 GVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLDALEK  216 (474)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHHHHHH
Confidence            99998875543         13135777777776643222221111             111211       26788888


Q ss_pred             hcC---CCccEEEEeCCCCCCccCCCHHH-HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547          180 LAD---ENTAAIVIINPCNPCGNVLTYQH-LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS  255 (311)
Q Consensus       180 ~l~---~~~~~i~i~~p~nptG~~~~~~~-l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s  255 (311)
                      .++   +++.++++..++|++|.++++++ +++|.++|++||+++|+||+|.++...|... ........++++   ++|
T Consensus       217 ~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~-a~~~~~i~pDiv---~ls  292 (474)
T PLN02624        217 IFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKML-ACDWEEVRPDVV---ILG  292 (474)
T ss_pred             HHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchh-hHHhcCCCCCEE---Eec
Confidence            774   35677888888999999887664 9999999999999999999999876555422 221122222333   468


Q ss_pred             ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |.++..++++|+++++.        +++..+... ...+++.++++++++.+.|+
T Consensus       293 K~lggG~~pigav~~~~--------~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe  339 (474)
T PLN02624        293 KALGGGVIPVSAVLADK--------DVMLCIKPGEHGSTFGGNPLASAVAMAALQ  339 (474)
T ss_pred             ccccCCCCcceeeeecH--------HHHhHhccCCcCCCCCCCHHHHHHHHHHHH
Confidence            99998779999999853        255655443 23455789999999888764

>PLN00144 acetylornithine transaminase

Probab=99.71  E-value=8.8e-16  Score=141.12  Aligned_cols=245  Identities=15%  Similarity=0.091  Sum_probs=154.5

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.++||..|.-.. ..--.+|.+.+++.+++.....  +.. ....+....+++.+.+..    ..+.|++++++++
T Consensus        12 ~dG~~ylD~~~g~~~~-~lGh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~f~~sGse   83 (382)
T PLN00144         12 VEGKEYLDMAAGIAVN-ALGHGDPDWVKAVAEQAGTLAH--VSN-VYHTIPQVELAKRLVASS----FADRVFFCNSGTE   83 (382)
T ss_pred             CCCCEEEECCcCHHhc-cCCCCCHHHHHHHHHHHHhcCC--ccc-cccCHHHHHHHHHHHhcC----CCCeEEEeCCcHH
Confidence            3688999998762111 1123578999999999874221  111 112334455666665432    2468999999999


Q ss_pred             HHHHHHHHHhcC--------C------CCEEEecCCCCcchHHHHHHcCcEE-EE---eeccCCCC--cccCHHHHHhhc
Q 021547          122 AVEIILTVITRL--------G------AANILLPRPGWPFYESFAKRNHIEV-RH---FDLLPERG--WEVDLEAVEALA  181 (311)
Q Consensus       122 a~~~~~~~l~~~--------g------~d~Vl~~~p~~~~~~~~~~~~g~~~-~~---~~~~~~~~--~~~d~~~l~~~l  181 (311)
                      |++.+++.....        +      ..+|+....+|.+....+....... ..   .+..+...  ..-|++.+++.+
T Consensus        84 A~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~  163 (382)
T PLN00144         84 ANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLI  163 (382)
T ss_pred             HHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhc
Confidence            999888866421        0      1578888888877543333222110 00   00000000  012688898887


Q ss_pred             CC-CccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccC
Q 021547          182 DE-NTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRW  258 (311)
Q Consensus       182 ~~-~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~  258 (311)
                      .. ++.++++...+||.|... +.+.+++|.++|++||+++|+||+|.++...|..+.. ...+.+  +   |.++||.+
T Consensus       164 ~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~P--D---i~t~sK~l  238 (382)
T PLN00144        164 QKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEP--D---IMTLAKPL  238 (382)
T ss_pred             CCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCC--C---EEEecccc
Confidence            54 455555554478844432 4444999999999999999999999998776653221 223332  3   66999996


Q ss_pred             CCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhh
Q 021547          259 IVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       259 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l  308 (311)
                       .+|+|+||++++.        ++++.+... ...++..++++++++.+.|
T Consensus       239 -~~G~pig~v~~~~--------~~~~~~~~~~~~~T~~~~pl~~aaa~a~l  280 (382)
T PLN00144        239 -AGGLPIGAVLVTE--------KVASAINPGDHGSTFAGGPLVCNAALAVL  280 (382)
T ss_pred             -cCCcceEEEEEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHH
Confidence             5799999999864        366666543 3456788999999998433

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.71  E-value=1.5e-15  Score=140.44  Aligned_cols=205  Identities=15%  Similarity=0.152  Sum_probs=140.9

Q ss_pred             cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH-HHHHHHHHHHhc---CCCCEEEecCCCCcchHHHHHHcCcEEEEeec
Q 021547           89 LPLARRAVAEYLNRDLPYKLSADDIYITLGCM-EAVEIILTVITR---LGAANILLPRPGWPFYESFAKRNHIEVRHFDL  164 (311)
Q Consensus        89 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~-~a~~~~~~~l~~---~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~  164 (311)
                      ...+.+.+.+.+.+..|.. ..+..++++|+| .++.+++.++..   +| |.|+++.-+|......+...|++++.++.
T Consensus       103 ~~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~g-d~VI~p~~th~S~~kAi~~~G~~pv~Vd~  180 (444)
T TIGR03531       103 LYKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKA-KYVIWPRIDQKSCIKAISTAGFEPRVIET  180 (444)
T ss_pred             HHHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCC-CEEEEECcChHHHHHHHHHcCCeEEEeee
Confidence            4566666666666655643 124588888888 577777777752   57 99999999999999999999999999996


Q ss_pred             -cCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccc
Q 021547          165 -LPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG  240 (311)
Q Consensus       165 -~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~  240 (311)
                       ...+++.+|++.|++++++   +.+++++.+|+  |+.....+++++|.++|++||+++|+|++|+.....-..... .
T Consensus       181 ~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~-~  257 (444)
T TIGR03531       181 VLDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELIN-K  257 (444)
T ss_pred             eecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhh-c
Confidence             3456789999999999875   45666666665  444344556999999999999999999999963211000000 1


Q ss_pred             ccCCCCCeEEEecCcccCCCCcceeeEEE-eeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhh
Q 021547          241 VFGSIVPVITLGSISKRWIVPGWRFGWLA-TNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       241 ~~~~~~~~i~i~s~sK~~~~~G~r~G~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  308 (311)
                      ......-.+++.|++|.+.+||.  |+++ +.++       ++++.+...+. ....+.++|.+.+.++
T Consensus       258 g~~~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~-------el~~~i~~~y~-g~~~~s~~~~~~~~ll  316 (444)
T TIGR03531       258 AIKVGRVDAVVSSTDKNFMVPVG--GAIIYSFDE-------NFIQEISKSYP-GRASASPSLDVLITLL  316 (444)
T ss_pred             cccccCCCeEEEeCccCCCCCCC--EEEEEECCH-------HHHHHHHHhcc-CCCCChHHHHHHHHHH
Confidence            11110114778899999988877  5655 5443       46677665533 2234456677666555

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.71  E-value=1.2e-15  Score=141.33  Aligned_cols=239  Identities=15%  Similarity=0.081  Sum_probs=154.3

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN-CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      ++++++||..|.... ..--.+|.+.+++.+.++..... ......-..++.+.+++++    |    .+.++++++|++
T Consensus        35 ~g~~~lD~~s~~~~~-~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs~  105 (401)
T TIGR01885        35 EGKRYLDFLSAYSAV-NQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF----G----YDKVLPMNTGAE  105 (401)
T ss_pred             CCCEEEEcccCHhhc-cCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc----C----CCEEEEeCccHH
Confidence            578889998863221 11124799999999987642210 1001122344555555444    3    358999999999


Q ss_pred             HHHHHHHHHhc---------CCCCEEEecCCCCcch-HHHHHHcCc------------EEEEeeccCCCCcccCHHHHHh
Q 021547          122 AVEIILTVITR---------LGAANILLPRPGWPFY-ESFAKRNHI------------EVRHFDLLPERGWEVDLEAVEA  179 (311)
Q Consensus       122 a~~~~~~~l~~---------~g~d~Vl~~~p~~~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~d~~~l~~  179 (311)
                      |++.++..+..         +|.+.|+.....|.+. ...+...+.            ++..++.       .|++.|++
T Consensus       106 A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~  178 (401)
T TIGR01885       106 AVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEE  178 (401)
T ss_pred             HHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHH
Confidence            99999988632         3436788888877653 333333221            1222221       26788888


Q ss_pred             hcC---CCccEEEEeCCCCCCccCCCHH-HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547          180 LAD---ENTAAIVIINPCNPCGNVLTYQ-HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS  255 (311)
Q Consensus       180 ~l~---~~~~~i~i~~p~nptG~~~~~~-~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s  255 (311)
                      .++   ++..++++..+++++|...+++ .+++|.++|++||+++|+||+|.++.+.|..+ ........++++   +++
T Consensus       179 ~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~~~~~~~~di~---~~g  254 (401)
T TIGR01885       179 ALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL-CVDHENVKPDIV---LLG  254 (401)
T ss_pred             HHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HHhhcCCCCCEE---Eee
Confidence            774   3566777777799999988644 69999999999999999999998776666432 222122222333   467


Q ss_pred             ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |.++..++|+|+++++.        ++++.++.. ...+.+.++++|+++.+.|+
T Consensus       255 K~l~~g~~~ig~v~~~~--------~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~  301 (401)
T TIGR01885       255 KALSGGVYPVSAVLADD--------DVMLTIKPGEHGSTYGGNPLACAVAVAALE  301 (401)
T ss_pred             ccccCCCCCcEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence            99987779999999753        366666542 33455678899988887764

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.71  E-value=2.2e-15  Score=140.06  Aligned_cols=158  Identities=20%  Similarity=0.167  Sum_probs=123.2

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~~  163 (311)
                      ....+++.++++++        .+..+++++++.|+.+++.++.++| |+|+++...|.+..    ..++..|++++.++
T Consensus        70 t~~~le~~la~l~g--------~~~~v~fsSG~~Ai~~al~~ll~~G-d~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd  140 (437)
T PRK05613         70 TVEALENRIASLEG--------GVHAVAFASGQAAETAAILNLAGAG-DHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE  140 (437)
T ss_pred             HHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHhcCCC-CEEEECCCccHHHHHHHHHHHHhcCeEEEEEC
Confidence            45677777877773        2345555555688888888888999 99999999998763    45577899999886


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                       .+     .|++.+++.+++++++|++.++.||+|.+.+   +++|.++|+++|+++|+|.+++...    ...++ .+ 
T Consensus       141 -~~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~----~~~p~-~~-  205 (437)
T PRK05613        141 -NP-----DDPESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAA----LVRPL-EL-  205 (437)
T ss_pred             -CC-----CCHHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCcccc----ccChH-Hh-
Confidence             22     2789999999999999999999999999988   9999999999999999999987522    11122 11 


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                        +-.+++.|++|.++.+|.-+|-+++.
T Consensus       206 --GaDivv~S~~K~l~G~gd~~gG~vv~  231 (437)
T PRK05613        206 --GADVVVASLTKFYTGNGSGLGGVLID  231 (437)
T ss_pred             --CCCEEEeeccceecCCCcceeEEEEe
Confidence              12399999999998888777776663

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.70  E-value=1.3e-15  Score=141.72  Aligned_cols=250  Identities=20%  Similarity=0.144  Sum_probs=153.9

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.++||..|.-... .--.+|.+.+++.+++.......+..  ...+.+..+++.+.+..+ ....+.++++++|++
T Consensus        30 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~a~~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGse  105 (420)
T TIGR00700        30 VDGNRLIDFASGIAVLN-IGHSHPRVVDAVRTQVAEFTHTCFMV--TPYEGYVALAEKLNRIAP-GSGPKKSVFFNSGAE  105 (420)
T ss_pred             CCCCEEEECccCHHhcc-CCCCCHHHHHHHHHHHHhccCccccc--cCChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHH
Confidence            35889999987732211 12357899999999987533222211  112234445555544322 112357999999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-Cc-------------EEEEeeccCCCC---------cccCHHHH
Q 021547          122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-HI-------------EVRHFDLLPERG---------WEVDLEAV  177 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~---------~~~d~~~l  177 (311)
                      |++.+++.... .|+.+|+....+|.+....+... +.             .+..++......         +.-+++.+
T Consensus       106 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (420)
T TIGR00700       106 AVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAA  185 (420)
T ss_pred             HHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHH
Confidence            99988887643 34467888888887654332221 11             112222110000         00124456


Q ss_pred             HhhcC-----CCccEEEEeCCCCCCccCCCHH-HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEE
Q 021547          178 EALAD-----ENTAAIVIINPCNPCGNVLTYQ-HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITL  251 (311)
Q Consensus       178 ~~~l~-----~~~~~i~i~~p~nptG~~~~~~-~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i  251 (311)
                      ++.+.     ++..++++......+|..++.+ .+++|.++|++||+++|+||+|.++.+.|. ...+..++..++   +
T Consensus       186 ~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~-~~a~~~~~~~pD---i  261 (420)
T TIGR00700       186 RAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGA-MFACEHEGPEPD---L  261 (420)
T ss_pred             HHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccch-hHHHhhcCCCCC---E
Confidence            65542     3445555555567788866544 499999999999999999999999877664 222233322223   4


Q ss_pred             ecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhh
Q 021547          252 GSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       252 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l  308 (311)
                      .++||.++ +|+|+||++++.        ++++.+... ...+++.++++|+++.+.|
T Consensus       262 ~~lsK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l  310 (420)
T TIGR00700       262 ITTAKSLA-DGLPLSGVTGRA--------EIMDAPAPGGLGGTYAGNPLACAAALAVL  310 (420)
T ss_pred             EEeecccc-CCcceEEEEecH--------HHHhhcCCCCcCCCCCcCHHHHHHHHHHH
Confidence            46999987 899999999853        466666533 3456788999999996655

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.69  E-value=2.9e-15  Score=140.65  Aligned_cols=252  Identities=17%  Similarity=0.124  Sum_probs=154.5

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.+|||..|--... .--.+|.+.+++.++++......  ......+.+..+++.+....+.. ..+.++++++|+
T Consensus        50 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~--~~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGs  125 (451)
T PRK06918         50 DVDGNQYIDFAGAIGTIN-VGHSHPKVKEALHKQVDQYIHTG--FNVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGA  125 (451)
T ss_pred             eCCCCEEEEcCCchhhcC-CCCCCHHHHHHHHHHHHhccCcc--ccccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcH
Confidence            335888999987732211 12357889999999987432111  11112344555666665543211 125899999999


Q ss_pred             HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-Cc-------------EEEEeeccCCC--CcccC--------HH
Q 021547          121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-HI-------------EVRHFDLLPER--GWEVD--------LE  175 (311)
Q Consensus       121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~--~~~~d--------~~  175 (311)
                      +|++.+++.... .|+.+|+....+|.+....+... +.             .+..+|.....  ...+.        ++
T Consensus       126 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (451)
T PRK06918        126 EAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIE  205 (451)
T ss_pred             HHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHH
Confidence            999998887643 34467888888887754333221 10             11222211100  00111        12


Q ss_pred             HHHhhc----CCCccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeE
Q 021547          176 AVEALA----DENTAAIVIINP-CNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVI  249 (311)
Q Consensus       176 ~l~~~l----~~~~~~i~i~~p-~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i  249 (311)
                      .+++.+    ..+..+.+|.-| +...|.++ +.+.+++|.++|++||+++|+||+|.++.+.|. +.++..++..++  
T Consensus       206 ~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~-~~a~~~~~v~pD--  282 (451)
T PRK06918        206 EFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGK-YFAIEHFDVVPD--  282 (451)
T ss_pred             HHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCc-eehhHhcCCCCC--
Confidence            233322    234455555666 44457645 555599999999999999999999999877664 334444443333  


Q ss_pred             EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                       +.++||.++ +|+|+||++++.        ++++.+... ...+++.++++|+++.+.|+
T Consensus       283 -i~t~sK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~  333 (451)
T PRK06918        283 -LITVSKSLG-AGVPISGVIGRK--------EIMDESAPGELGGTYAGSPLGCAAALAVLD  333 (451)
T ss_pred             -EEeeehhhc-CCCccEEEEEcH--------HHHhccCCCCcCcCCCcCHHHHHHHHHHHH
Confidence             448999987 899999999853        366666543 34567899999999666553

>PRK04311 selenocysteine synthase; Provisional

Probab=99.69  E-value=7.5e-15  Score=137.03  Aligned_cols=210  Identities=17%  Similarity=0.150  Sum_probs=143.1

Q ss_pred             cCCCCCeeecCCC--CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---CC--cHHHHHHHHHHHhhcCCCCCCCCCE
Q 021547           41 KNDPRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPM---FG--LPLARRAVAEYLNRDLPYKLSADDI  113 (311)
Q Consensus        41 ~~~~~~~i~~~~g--~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~---~g--~~~lr~~ia~~l~~~~g~~~~~~~v  113 (311)
                      +.+-+.+||-...  .-.. ...+.++.+.+++.+.+.+.....|.-.   .|  +..+++.+++++        ..++.
T Consensus        75 ~~~lr~vinatg~v~~tNl-g~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~--------Gae~a  145 (464)
T PRK04311         75 RPSLRPVINATGVVLHTNL-GRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT--------GAEDA  145 (464)
T ss_pred             cCCCcceecCCccEEeccC-CCCCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh--------CCCeE
Confidence            3345777775543  1111 1245778999999988764321122211   12  256778888877        33467


Q ss_pred             EEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcc------hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547          114 YITLGCMEAVEIILTVITRLGAANILLPRPGWPF------YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA  187 (311)
Q Consensus       114 ~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  187 (311)
                      +++++++.|+.+++.++ .+| |+|++++..+..      +...++..|++++.++...    ..+++++++++++++++
T Consensus       146 ~vv~sgtaAl~l~l~~l-~~G-deVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~Tkl  219 (464)
T PRK04311        146 LVVNNNAAAVLLALNAL-AAG-KEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTAL  219 (464)
T ss_pred             EEECCHHHHHHHHHHHh-CCC-CEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeE
Confidence            88888899999888765 788 999999764432      2346678899999887532    35789999999999999


Q ss_pred             EEEeCCCCC--Cc--cCCCHHHHHHHHHHHHHhCCEEEEeccccCCc----cC-CCCCCcccccCCCCCeEEEecCcccC
Q 021547          188 IVIINPCNP--CG--NVLTYQHLQKIAETARKLGILVIADEVYGHLA----FG-STPYIPMGVFGSIVPVITLGSISKRW  258 (311)
Q Consensus       188 i~i~~p~np--tG--~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~----~~-~~~~~~~~~~~~~~~~i~i~s~sK~~  258 (311)
                      +++++++|+  +|  ...+   +++|+++|++||+++++|.+.+.+.    |+ ...+ .+......+..++++|.+|.+
T Consensus       220 V~~vh~sN~~i~G~~~~~d---l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p-~~~~~l~~GaDiv~fSg~K~L  295 (464)
T PRK04311        220 LLKVHTSNYRIEGFTKEVS---LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEP-TVQELLAAGVDLVTFSGDKLL  295 (464)
T ss_pred             EEEEcCCCccccccCCcCC---HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCC-chhhHHhcCCcEEEecCcccc
Confidence            999999998  34  4556   9999999999999999999755431    11 0111 111111223449999999998


Q ss_pred             CCCcceeeEEEee
Q 021547          259 IVPGWRFGWLATN  271 (311)
Q Consensus       259 ~~~G~r~G~i~~~  271 (311)
                      +.|  ..|++++.
T Consensus       296 gGp--~~G~i~g~  306 (464)
T PRK04311        296 GGP--QAGIIVGK  306 (464)
T ss_pred             cCC--ceEEEEEc
Confidence            766  47888774

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.69  E-value=2.5e-15  Score=139.80  Aligned_cols=252  Identities=17%  Similarity=0.107  Sum_probs=159.3

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.++||..|.-... .--.+|.+.+++.+++.......+..  ...+.+..+++.+....+. -..+.++++++|+
T Consensus        36 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGs  111 (421)
T PRK06777         36 DVEGREYIDFAAGIAVLN-TGHRHPKVVAAVRQQLDQFTHTAYQI--VPYASYVTLAERINALAPI-DGPAKTAFFTTGA  111 (421)
T ss_pred             eCCCCEEEEcccCHHhhc-cCCCCHHHHHHHHHHHhhcccccccc--cCChHHHHHHHHHHHhCCC-CCCceEEEeCCcH
Confidence            345889999977621111 12357889999999987532212211  1122334455555543221 1235899999999


Q ss_pred             HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCcE-------------EEEeeccCCCC---cccCHHHHHhhcC
Q 021547          121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHIE-------------VRHFDLLPERG---WEVDLEAVEALAD  182 (311)
Q Consensus       121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~~-------------~~~~~~~~~~~---~~~d~~~l~~~l~  182 (311)
                      +|++.+++.... .|+.+|+....+|.+....+.. .+..             +..++......   ...+++.+++.+.
T Consensus       112 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~  191 (421)
T PRK06777        112 EAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFK  191 (421)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHH
Confidence            999988887643 4446788888888776443332 1210             11111110000   0113556776653


Q ss_pred             -----CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcc
Q 021547          183 -----ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISK  256 (311)
Q Consensus       183 -----~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK  256 (311)
                           ++..++++....+..|. .++++.+++|.++|++||+++|+||+|.++.+.|. +.....++..++++   ++||
T Consensus       192 ~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~-~~~~~~~~~~pDiv---~~sK  267 (421)
T PRK06777        192 ADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGK-LFAMEYYDVKPDLI---TMAK  267 (421)
T ss_pred             hccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCc-hhhhhhcCCCCCEE---eeeh
Confidence                 23445555555777886 57899999999999999999999999998877664 33334443333433   7999


Q ss_pred             cCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       257 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .++ +|+|+||++++.        ++++.+... ...+++.++++|+++.+.|+
T Consensus       268 ~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~  312 (421)
T PRK06777        268 SLG-GGMPISAVVGRA--------EVMDAPAPGGLGGTYAGNPLAVAAALAVLD  312 (421)
T ss_pred             hhc-CCCceEEEEEcH--------HHHhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            987 899999999853        366666543 33567889999999998875

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.68  E-value=1.7e-15  Score=132.39  Aligned_cols=212  Identities=13%  Similarity=0.105  Sum_probs=149.8

Q ss_pred             eecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHH
Q 021547           48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIIL  127 (311)
Q Consensus        48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~  127 (311)
                      ++|...+     ...+.|++.++|..+... ....|+.++-...+.+.+++.+    |    ...++++++||++..+++
T Consensus         2 ~~f~SDn-----~~g~~~~m~eam~~a~~~-~~~~YG~D~~~~~~e~~~ae~~----g----~~a~~Fv~sGT~aN~lal   67 (342)
T COG2008           2 IDFRSDN-----VAGPTPEMREALAAANAV-GDDVYGEDPTTNALEQRIAELF----G----KEAALFVPSGTQANQLAL   67 (342)
T ss_pred             CccccCc-----cCCCCHHHHHHHHhcccc-CCCCCCCCHHHHHHHHHHHHHh----C----CceEEEecCccHHHHHHH
Confidence            4555554     246789999999887643 2336877665566666666666    2    378999999999999999


Q ss_pred             HHHhcCCCCEEEecCCCCcchHH--HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCCCcc
Q 021547          128 TVITRLGAANILLPRPGWPFYES--FAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNPCGN  199 (311)
Q Consensus       128 ~~l~~~g~d~Vl~~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~  199 (311)
                      .+.+++| +.|++..-.|....+  ..+..+ ...++++.+..++.++++++++.+..      .++++++.+.+|..|.
T Consensus        68 ~~~~~~~-~~vi~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~Gt  145 (342)
T COG2008          68 AAHCQPG-ESVICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGT  145 (342)
T ss_pred             HHhcCCC-CeEEEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCce
Confidence            9999999 999999888864322  223333 33444555667789999999997653      3566677777778899


Q ss_pred             CCCHHHHHHHHHHHHHhCCEEEEeccccC--CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547          200 VLTYQHLQKIAETARKLGILVIADEVYGH--LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL  277 (311)
Q Consensus       200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~--~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~  277 (311)
                      ++|.+++++|.++|+++|+.|+.|.+--.  +...+.+......   .. .++..++||..++|+   |.|++.+.+   
T Consensus       146 Vy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~---~~-D~v~~~~tK~g~~~~---gAiv~gn~~---  215 (342)
T COG2008         146 VYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKS---YV-DSVSFCLTKGGGAPV---GAIVFGNRD---  215 (342)
T ss_pred             ecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHh---hC-CEEEEecccCCccee---eeEEEcCHH---
Confidence            99999999999999999999999998653  2222322112221   11 256669999966555   999987754   


Q ss_pred             chhhHHHHHhhh
Q 021547          278 QKSGIVGSIKAC  289 (311)
Q Consensus       278 ~~~~~~~~~~~~  289 (311)
                          ++++++..
T Consensus       216 ----~~~~a~~~  223 (342)
T COG2008         216 ----FAKRARRW  223 (342)
T ss_pred             ----HHHHHHHH
Confidence                66665544

>TIGR01814 kynureninase kynureninase

Probab=99.68  E-value=6.2e-15  Score=136.88  Aligned_cols=197  Identities=15%  Similarity=0.102  Sum_probs=134.7

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc---CCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS---SMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~---~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      +.++.|+++.-     .+.|+.+.+++.+.+..   +.. ..+....+...+.+.+.+ + +.+  ++.+++|++|+|+|
T Consensus        26 ~~~iyld~~a~-----g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~--g~~~~~v~~~~~~t   96 (406)
T TIGR01814        26 NAVIYLDGNSL-----GLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLV--GAKEDEVVVMNTLT   96 (406)
T ss_pred             CCcEEecCCCc-----CcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-ccc--CCCCCcEEEeCCch
Confidence            67899998872     24578888888776542   110 011101121222222222 1 223  35788999999999


Q ss_pred             HHHHHHHHHHhcCC--CCEEEecCCCCcchH----HHHHHcCcEE----EEeeccCCCCcccCHHHHHhhc---CCCccE
Q 021547          121 EAVEIILTVITRLG--AANILLPRPGWPFYE----SFAKRNHIEV----RHFDLLPERGWEVDLEAVEALA---DENTAA  187 (311)
Q Consensus       121 ~a~~~~~~~l~~~g--~d~Vl~~~p~~~~~~----~~~~~~g~~~----~~~~~~~~~~~~~d~~~l~~~l---~~~~~~  187 (311)
                      ++++.++.++.+++  .+.|++....|+...    ..++..|+++    +.++.  ..++.++++.+++.+   .+++++
T Consensus        97 ~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~~~l~~~~~~~~~~t~l  174 (406)
T TIGR01814        97 INLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRLEDILDTIEKNGDDIAV  174 (406)
T ss_pred             HHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCHHHHHHHHHhcCCCeEE
Confidence            99999999986554  136888889998732    3456678776    34433  334567888888876   468999


Q ss_pred             EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCC-CCc
Q 021547          188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI-VPG  262 (311)
Q Consensus       188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G  262 (311)
                      +++++++|.||..++   +++|.++|+++|+++++|++++.    |.-+..+..+   +..+++.|.+|+++ .||
T Consensus       175 v~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~----G~~~id~~~~---gvD~~~~s~hK~l~g~pG  240 (406)
T TIGR01814       175 ILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAV----GNVPLDLHDW---GVDFACWCTYKYLNAGPG  240 (406)
T ss_pred             EEEeccccccceecC---HHHHHHHHHHcCCEEEEEccccc----CCcccccccC---CCCEEEEcCccccCCCCC
Confidence            999999999999999   99999999999999999999996    2222233222   23489999999864 455

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.67  E-value=6.6e-15  Score=131.71  Aligned_cols=188  Identities=20%  Similarity=0.158  Sum_probs=145.8

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~~  163 (311)
                      ....+.+.+++..        ...++++.++|..|+..++..|+.+| +.|++....|.+...    .....|.+...++
T Consensus        78 t~~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~~~g-~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd  148 (409)
T KOG0053|consen   78 TRDVLESGIAALE--------GAAHALLFSSGMAAITVALLHLLPAG-DHIVATGDVYGGTLRILRKFLPKFGGEGDFVD  148 (409)
T ss_pred             chHHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhcCCC-CcEEEeCCCcccHHHHHHHHHHHhCceeeeec
Confidence            4456677777766        44568999999999999999999999 999999999987644    5556777877776


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      +.       +++.++++++++++++++.+|.||+..+.+   ++++.++|+++|+++|+|++++...+-  .+.++   .
T Consensus       149 ~~-------~~~~~~~~i~~~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~--~pL~l---G  213 (409)
T KOG0053|consen  149 VD-------DLKKILKAIKENTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQ--DPLPL---G  213 (409)
T ss_pred             hh-------hHHHHHHhhccCceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCccccc--Chhhc---C
Confidence            53       778899999999999999999999999988   999999999999999999999975321  12222   2


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  308 (311)
                      .   .|+++|.+|.++..+-=+|-+++.+.      +++.++++..+. ..++.+|+......+-+
T Consensus       214 A---DIV~hSaTKyi~Ghsdvi~G~iv~n~------~~~~~~l~~~~~~lg~~~~p~~~~ll~Rgl  270 (409)
T KOG0053|consen  214 A---DIVVHSATKYIGGHSDVIGGSVVLNS------EELASRLKFLQEDLGWCEDPFDLFLLSRGL  270 (409)
T ss_pred             C---CEEEEeeeeeecCCcceeeeEEecCc------HHHHHHHHHHHHHhcCCCCHHHHHHHhcCc
Confidence            2   29999999999998765555555432      358888887744 66788887666554433

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.67  E-value=5.5e-15  Score=135.20  Aligned_cols=198  Identities=18%  Similarity=0.162  Sum_probs=145.7

Q ss_pred             HHHHHH-HHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCC
Q 021547           65 AVAEDA-IVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRP  143 (311)
Q Consensus        65 ~~~~~a-~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p  143 (311)
                      +++.++ +..++..++  .|..++.+.+|++++++++        ..++++.|++++.|+++++...+++| |.|  +.+
T Consensus        50 ~aMs~~q~a~~~~GDe--~yag~~s~~~lE~~va~~~--------G~~~av~v~sGT~Al~ll~~l~l~pG-DeV--psn  116 (450)
T TIGR02618        50 NAMSDKQWAGLMMGDE--AYAGSRNFYHLERTVRELY--------GFKYVVPTHQGRGAENLLSQIAIKPG-DYV--PGN  116 (450)
T ss_pred             HHHHHHHHHHhhhcch--hhcCCCcHHHHHHHHHHHH--------CCCeEEEcCCHHHHHHHHHHhCCCCc-CEE--CCc
Confidence            667777 666665554  5998889999999999999        45689999999999998887778999 977  667


Q ss_pred             CCcch-HHHHHHcCcEEEEeecc--------CCCCcccCHHHHHhhcCC----CccEEEEeCCCC-CCccCCCHHHHHHH
Q 021547          144 GWPFY-ESFAKRNHIEVRHFDLL--------PERGWEVDLEAVEALADE----NTAAIVIINPCN-PCGNVLTYQHLQKI  209 (311)
Q Consensus       144 ~~~~~-~~~~~~~g~~~~~~~~~--------~~~~~~~d~~~l~~~l~~----~~~~i~i~~p~n-ptG~~~~~~~l~~l  209 (311)
                      .|... ...++..|..++.++.+        ...++.+|++.+++.+++    +++++.+.+++| ..|..+|.++++++
T Consensus       117 ~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I  196 (450)
T TIGR02618       117 MYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREV  196 (450)
T ss_pred             eeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHH
Confidence            77444 44478888866666432        124578999999999875    345677888877 55899999999999


Q ss_pred             HHHHHHhCCEEEEeccccC--Cc--------cCCCCC----CcccccCCCCCeEEEecCcccCCCC-cceeeEEEeeCCC
Q 021547          210 AETARKLGILVIADEVYGH--LA--------FGSTPY----IPMGVFGSIVPVITLGSISKRWIVP-GWRFGWLATNDPN  274 (311)
Q Consensus       210 ~~l~~~~~~~li~D~ay~~--~~--------~~~~~~----~~~~~~~~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~  274 (311)
                      .++|++||+.||.|.++..  ..        |.+.+.    ..+..+.+    ....|..|.++.| |   |+++..++ 
T Consensus       197 ~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD----~~~~S~~Kd~~~~~G---G~l~~~d~-  268 (450)
T TIGR02618       197 RELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD----GCTMSGKKDCLVNIG---GFLCMNDD-  268 (450)
T ss_pred             HHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc----EEEEeeccCCCCCCc---eEEEeCCH-
Confidence            9999999999999999975  11        222222    01112221    5788999997776 5   66665664 


Q ss_pred             CccchhhHHHHHhhh
Q 021547          275 GVLQKSGIVGSIKAC  289 (311)
Q Consensus       275 ~~~~~~~~~~~~~~~  289 (311)
                            ++.++++..
T Consensus       269 ------~l~~k~r~~  277 (450)
T TIGR02618       269 ------EMFQSAKEL  277 (450)
T ss_pred             ------HHHHHHHHH
Confidence                  377776665

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.66  E-value=3.9e-15  Score=132.76  Aligned_cols=240  Identities=20%  Similarity=0.205  Sum_probs=167.7

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG  118 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g  118 (311)
                      +.+++.+|||..|.-.. ..--++|.+.++++++.+.-.  .+.|.     .+.+..+++.|.+..+   ..+.|+++++
T Consensus        38 D~~G~~YlDf~~Giav~-~lGH~hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~~s~---~~d~vff~NS  108 (404)
T COG4992          38 DQQGREYLDFAAGIAVN-NLGHCHPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVELSP---FADRVFFCNS  108 (404)
T ss_pred             CCCCCEeeeeccceeee-ccCCCCHHHHHHHHHHHHHhhhcccccC-----ChHHHHHHHHHHhhCc---cccEEEEcCC
Confidence            34689999999884322 123478999999999876321  11222     2356666666665322   3789999999


Q ss_pred             hHHHHHHHHHHHhcCC----CCEEEecCCCCcchHHHHHHcCc-------------EEEEeeccCCCCcccCHHHHHhhc
Q 021547          119 CMEAVEIILTVITRLG----AANILLPRPGWPFYESFAKRNHI-------------EVRHFDLLPERGWEVDLEAVEALA  181 (311)
Q Consensus       119 ~~~a~~~~~~~l~~~g----~d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~l  181 (311)
                      +++|+++++..-.+.+    +.+|+.....|++--...-..+-             .+..+|.       -|.+.+++++
T Consensus       109 GaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-------nDi~al~~ai  181 (404)
T COG4992         109 GAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-------NDIEALEAAI  181 (404)
T ss_pred             cHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-------CCHHHHHHHh
Confidence            9999999998876432    34888887777642111111111             1222222       2889999999


Q ss_pred             CCCccEEEEeCCCCCCccCCCHH-HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCC
Q 021547          182 DENTAAIVIINPCNPCGNVLTYQ-HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIV  260 (311)
Q Consensus       182 ~~~~~~i~i~~p~nptG~~~~~~-~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~  260 (311)
                      ++++.++++...+-..|+..+++ .++++-++|++||+++|.||++.++..+|+ +.....+.-.++++   ++.|.+| 
T Consensus       182 ~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk-~fA~e~~gV~PDI~---tlaK~Lg-  256 (404)
T COG4992         182 DEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGK-LFAYEHYGVEPDIL---TLAKALG-  256 (404)
T ss_pred             ccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccch-HHHHHHhCCCCCEE---Eeecccc-
Confidence            99999999999999999977555 499999999999999999999999887774 33334444444455   7899965 


Q ss_pred             CcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          261 PGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       261 ~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .|+++|.+++..        .+.+.+..- .+.+++.||++.+++.+.|+
T Consensus       257 GG~PigA~la~~--------~~~~~~~~G~HgSTfGGNpLacAv~~a~l~  298 (404)
T COG4992         257 GGFPIGAMLATE--------EIASAFTPGDHGSTFGGNPLACAVALAVLE  298 (404)
T ss_pred             CCccceeeEEch--------hhhhcCCCCcccCCCCcCHHHHHHHHHHHH
Confidence            579999999852        133444444 44678999999999887764

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.66  E-value=1.6e-14  Score=130.56  Aligned_cols=190  Identities=21%  Similarity=0.171  Sum_probs=142.6

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~  162 (311)
                      +....|.++++++-        ..++.+.+++|+.|+..++.+++++| |+|+++...|.+..    ...+..|+++..+
T Consensus        63 PT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~G-D~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~  133 (396)
T COG0626          63 PTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAG-DHVLLPDDLYGGTYRLFEKILQKFGVEVTFV  133 (396)
T ss_pred             ccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCC-CEEEecCCccchHHHHHHHHHHhcCeEEEEE
Confidence            45567777777776        56789999999999999999999999 99999999998654    4556788888877


Q ss_pred             eccCCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547          163 DLLPERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV  241 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~  241 (311)
                      +.       .+.+.+++.+. +++++|++.+|.||+-.+.+   +.+|+++|+++|+++|+|++|..-.+-  .+..+  
T Consensus       134 d~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q--~PL~~--  199 (396)
T COG0626         134 DP-------GDDEALEAAIKEPNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQ--RPLEL--  199 (396)
T ss_pred             CC-------CChHHHHHHhcccCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCccccccc--Chhhc--
Confidence            54       25556666666 59999999999999988887   999999999999999999999974332  12222  


Q ss_pred             cCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-h-ccccCCCchhHHHHHhhhh
Q 021547          242 FGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-L-GVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       242 ~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~q~~~~~~l~  309 (311)
                       .   -.|+++|.+|.++..+-=+|-+++.+.+      .+.+.+... . ......+|+..+.+.+-|+
T Consensus       200 -G---aDIVvhSaTKyl~GHsDvl~G~v~~~~~------~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk  259 (396)
T COG0626         200 -G---ADIVVHSATKYLGGHSDVLGGVVLTPNE------ELYELLFFAQRANTGAVLSPFDAWLLLRGLR  259 (396)
T ss_pred             -C---CCEEEEeccccccCCcceeeeEEecChH------HHHHHHHHHHHhhcCCCCCHHHHHHHHhccc
Confidence             1   2399999999999987555555543332      355655222 2 3566778887777766554

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.65  E-value=3.2e-14  Score=132.51  Aligned_cols=193  Identities=18%  Similarity=0.132  Sum_probs=134.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC-----CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCC
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPM-----FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGA  135 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~-----~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~  135 (311)
                      .+.++.+.+++.+.+.......|.-.     .-+..+++.++++++        .+..+++++++.|+.+++.+ +.+| 
T Consensus        91 s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g--------ae~alvv~sg~aAi~l~l~~-l~~G-  160 (454)
T TIGR00474        91 APLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG--------AEDALVVNNNAAAVLLALNT-LAKG-  160 (454)
T ss_pred             CCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHH-hCCc-
Confidence            45689999999988874321122211     113678888888883        34466778888899888865 4789 


Q ss_pred             CEEEecCCCCcc------hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCC--c--cCCCHHH
Q 021547          136 ANILLPRPGWPF------YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC--G--NVLTYQH  205 (311)
Q Consensus       136 d~Vl~~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt--G--~~~~~~~  205 (311)
                      |+|++++..|..      +...++..|++++.++...    ..++++++++++++++++++.+++|++  |  ...+   
T Consensus       161 deVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~d---  233 (454)
T TIGR00474       161 KEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVS---  233 (454)
T ss_pred             CEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCC---
Confidence            999999876532      2356778899999886531    257899999999999999999999985  6  3566   


Q ss_pred             HHHHHHHHHHhCCEEEEeccccCCccC---CCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          206 LQKIAETARKLGILVIADEVYGHLAFG---STPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       206 l~~l~~l~~~~~~~li~D~ay~~~~~~---~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      +++|+++|+++|+++++|.+.+.+.-.   +-+..+ +......+-.++++|.+|.++.|  ..|++++..
T Consensus       234 l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~  302 (454)
T TIGR00474       234 IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKK  302 (454)
T ss_pred             HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEECH
Confidence            999999999999999999875543110   001111 11111223349999999998766  478888753

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.64  E-value=2e-14  Score=125.50  Aligned_cols=165  Identities=23%  Similarity=0.170  Sum_probs=135.7

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~  162 (311)
                      +....|+++|+.+-..        -.-+.+.+++.|+..++..++++| |.|+-.+--|.+.    ...++.+|+++.++
T Consensus        62 PT~~vlE~RiAaLEGG--------~aa~a~aSG~AA~~~ai~~la~aG-D~iVss~~LYGGT~~lf~~tl~~~Gi~v~fv  132 (426)
T COG2873          62 PTTDVLEERIAALEGG--------VAALAVASGQAAITYAILNLAGAG-DNIVSSSKLYGGTYNLFSHTLKRLGIEVRFV  132 (426)
T ss_pred             chHHHHHHHHHHhhcc--------hhhhhhccchHHHHHHHHHhccCC-CeeEeeccccCchHHHHHHHHHhcCcEEEEe
Confidence            4567788888877632        234556777999999999999999 9999998888753    45678899999998


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      +.       .|++.+++++++++|++++.+..||.+.+.+   ++++.++|+++++++|+|+.++.-.+    ..|+.  
T Consensus       133 d~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpyl----~rP~~--  196 (426)
T COG2873         133 DP-------DDPENFEAAIDENTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPYL----CRPIE--  196 (426)
T ss_pred             CC-------CCHHHHHHHhCcccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCccee----cchhh--
Confidence            64       2789999999999999999999999999998   99999999999999999999986211    12222  


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccc
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ  278 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~  278 (311)
                        .+-.|+++|+||+.|..|.-+|-+++..-..+|.
T Consensus       197 --hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~  230 (426)
T COG2873         197 --HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWT  230 (426)
T ss_pred             --cCCCEEEEeecccccCCccccceEEEeCCccccc
Confidence              2233999999999999999999999987776665

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.64  E-value=7e-14  Score=129.94  Aligned_cols=216  Identities=16%  Similarity=0.035  Sum_probs=137.9

Q ss_pred             hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHH-hcCCC----CC-CCCCCCcHHHHH---
Q 021547           24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSV-RSSMF----NC-YAPMFGLPLARR---   94 (311)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~-~~~~~----~~-Y~~~~g~~~lr~---   94 (311)
                      ...+|++++++-..+     ....+++--.+      -..+|.+++++...+ .....    .+ |...+...+|++   
T Consensus        12 ~~~~~~~~~~~~~~~-----~~~~~~l~~se------n~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~   80 (416)
T PRK13034         12 YDDEVFAAINKELER-----QQDHLELIASE------NFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAI   80 (416)
T ss_pred             hCHHHHHHHHHHHHH-----HhcCeeecccc------cCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHH
Confidence            557788888753322     34566665554      134899999998885 32110    01 111234566776   


Q ss_pred             -HHHHHHhhcCCCCCCCCCEE-EeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch-HHHHHH--cCcEE--EEeeccCC
Q 021547           95 -AVAEYLNRDLPYKLSADDIY-ITLGCMEAVEIILTVITRLGAANILLPRPGWPFY-ESFAKR--NHIEV--RHFDLLPE  167 (311)
Q Consensus        95 -~ia~~l~~~~g~~~~~~~v~-~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~-~~~~~~--~g~~~--~~~~~~~~  167 (311)
                       .++++++        .+..+ .+++|+.|+..++.+++++| |+|+++...|.+. ...++.  .+...  ..++++. 
T Consensus        81 ~~la~l~g--------~~~alv~~~SG~~A~~~~l~al~~~G-D~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-  150 (416)
T PRK13034         81 ERAKQLFG--------CDYANVQPHSGSQANGAVYLALLKPG-DTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDR-  150 (416)
T ss_pred             HHHHHHhC--------CCceEEecCCcHHHHHHHHHHhcCCC-CEEEEcCccceeeeecCCcceeccceeeeEEccccc-
Confidence             7777763        23554 46788999999999999999 9999999998762 222221  11111  2333322 


Q ss_pred             CCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc-CCCCCCcccccCCC
Q 021547          168 RGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF-GSTPYIPMGVFGSI  245 (311)
Q Consensus       168 ~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~-~~~~~~~~~~~~~~  245 (311)
                      .++.+|++++++.++. ++++|++..+.  +|...+   +.+|.++|+++|+++++|++|+...+ .|....++.     
T Consensus       151 ~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~-----  220 (416)
T PRK13034        151 LTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELD---FARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFP-----  220 (416)
T ss_pred             ccCCcCHHHHHHHHhhcCCeEEEECCCc--cccccC---HHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCC-----
Confidence            2456899999988743 67777765554  455556   88889999999999999999986443 232222221     


Q ss_pred             CCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          246 VPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       246 ~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      ...++++|++|+++.+.  -|++++.+
T Consensus       221 ~~Di~~~s~~K~l~g~~--GG~v~~~~  245 (416)
T PRK13034        221 HAHVVTTTTHKTLRGPR--GGMILTND  245 (416)
T ss_pred             CceEEEEeCcccCCCCC--CeEEEECc
Confidence            13489999999974432  27776644

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.64  E-value=2.6e-14  Score=130.75  Aligned_cols=183  Identities=16%  Similarity=0.127  Sum_probs=127.8

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~  162 (311)
                      +...+|++.++++.        ..+..+++++++.|+.+++.++.++| |+|+++.+.|.+.    ...+...|++++.+
T Consensus        64 P~~~~lE~~la~le--------g~~~av~~sSG~aAi~~al~all~~G-D~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fv  134 (384)
T PRK06434         64 PTVQAFEEKYAVLE--------NAEHALSFSSGMGAITSAILSLIKKG-KRILSISDLYGQTFYFFNKVLKTLGIHVDYI  134 (384)
T ss_pred             hhHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCC-CEEEEecCccchHHHHHHHHHHhcCcEEEEE
Confidence            45677888888887        34568888888999999999999999 9999988766544    36677899999999


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      ++.+.+.+.++        .++++++++.+|+||++.+.+   +++|.++|++++  +++|.+++.- +.+.   ++.. 
T Consensus       135 d~~~~~~~~l~--------~~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~-~~~~---pl~~-  196 (384)
T PRK06434        135 DTDRLNSLDFD--------PSNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASP-YNQN---PLDL-  196 (384)
T ss_pred             CCCChhheeec--------CCCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCc-ccCC---chhc-
Confidence            87432222211        136899999999999999877   999999999998  4679998642 2222   2221 


Q ss_pred             CCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHh
Q 021547          243 GSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMF  306 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~  306 (311)
                         +-.++++|.+|.++.+| .-.|.+++.++       ++.++++... ......+++..+.+.+
T Consensus       197 ---gaDivv~S~tK~i~G~~d~~gG~vv~~~~-------~~~~~~~~~~~~~G~~~~~~~A~l~~~  252 (384)
T PRK06434        197 ---GADVVIHSATKYISGHSDVVMGVAGTNNK-------SIFNNLVERRKTLGSNPDPIQAYLALR  252 (384)
T ss_pred             ---CCCEEEeecccccCCCCCceEEEEecCcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence               12389999999988766 44455555443       3556655442 3344556664444333

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.63  E-value=3.2e-14  Score=133.09  Aligned_cols=250  Identities=18%  Similarity=0.091  Sum_probs=152.0

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.+|||..|--.... --.+|.+.+++.+++..........  -..+....+++.|.+..+  -..+.++++++|++
T Consensus        40 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~a~~~q~~~~~~~~~~~--~~~~~~~~la~~L~~~~~--~~~~~v~f~~SGse  114 (433)
T PRK08117         40 VDGKEYLDFTSGIAVANV-GHRHPKVVQAIKEQADKLMHGPSGV--IYYESILKLAEELAEITP--GGLDCFFFSNSGAE  114 (433)
T ss_pred             CCCCEEEECCcchhhccC-CCCCHHHHHHHHHHHHhccCccccc--cCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHH
Confidence            357889999877321111 2367889999999986422111000  112334445555544331  13467999999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHH-HcC--c-----------EEEEeeccCCCC--cc--------cCHHH
Q 021547          122 AVEIILTVITR-LGAANILLPRPGWPFYESFAK-RNH--I-----------EVRHFDLLPERG--WE--------VDLEA  176 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~-~~g--~-----------~~~~~~~~~~~~--~~--------~d~~~  176 (311)
                      |++.+++.... .|+.+|+.....|.+...... ..+  .           .+..+|......  ..        -+++.
T Consensus       115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (433)
T PRK08117        115 AIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRD  194 (433)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHH
Confidence            99998886432 343678888877776443321 111  0           112222211000  00        14455


Q ss_pred             HHhhcC-----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547          177 VEALAD-----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT  250 (311)
Q Consensus       177 l~~~l~-----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  250 (311)
                      +++.++     .+..++++.......|.. .+++.+++|.++|++||+++|+||+|.++...|..+. ...++..   .-
T Consensus       195 l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~-~~~~gv~---pD  270 (433)
T PRK08117        195 LESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFA-AQTFGVV---PD  270 (433)
T ss_pred             HHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchh-HhhcCCC---CC
Confidence            666543     234444555446666775 4788899999999999999999999998766664322 1222222   22


Q ss_pred             EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +.+++|.++ +|+++|++++..        ++++.+... ...+.+.++++++++.+.|+
T Consensus       271 i~t~sK~lg-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~np~~~aaa~a~L~  321 (433)
T PRK08117        271 IMTIAKGIA-SGLPLSAVVASK--------ELMEQWPLGSHGTTFGGNPVACAAALATLE  321 (433)
T ss_pred             Eeehhhhcc-CCCcceeEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence            469999987 799999998853        366665443 33456789999999888775

>PRK02769 histidine decarboxylase; Provisional

Probab=99.63  E-value=1e-13  Score=126.89  Aligned_cols=173  Identities=16%  Similarity=0.092  Sum_probs=128.7

Q ss_pred             cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC
Q 021547           89 LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT--RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP  166 (311)
Q Consensus        89 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  166 (311)
                      ..++.+.+.+++.+.+|.+-.....++|+|+|+++..++....  .++ +.|+++.-.|.+....++..|.+...++.. 
T Consensus        63 ~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~-~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~-  140 (380)
T PRK02769         63 SFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPD-GTLYYSKDTHYSVSKIARLLRIKSRVITSL-  140 (380)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCC-cEEEeCCCceehHHHHHHHcCCCCceeccC-
Confidence            4566666666666656543211124889999999876655443  467 899999999999999999999998888875 


Q ss_pred             CCCcccCHHHHHhhcCCC---ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC---CEEEEeccccCCccC---CCCCC
Q 021547          167 ERGWEVDLEAVEALADEN---TAAIVIINPCNPCGNVLTYQHLQKIAETARKLG---ILVIADEVYGHLAFG---STPYI  237 (311)
Q Consensus       167 ~~~~~~d~~~l~~~l~~~---~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~---~~li~D~ay~~~~~~---~~~~~  237 (311)
                       .++.+|+++|++.++++   +.+++++.++|++|.+.|   +++|.++|+++|   +++++|.+|+.+...   ..+..
T Consensus       141 -~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~  216 (380)
T PRK02769        141 -PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPF  216 (380)
T ss_pred             -CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecccCccccC
Confidence             35679999999988775   888899999999999999   899999999998   699999999974321   11111


Q ss_pred             cccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          238 PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       238 ~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      .+.   . +-..+..|.+|.++.| ..+|.+++.+
T Consensus       217 d~~---~-~vDsis~s~HK~~~~P-~g~G~l~~r~  246 (380)
T PRK02769        217 SFA---D-GIDSIAISGHKFIGSP-MPCGIVLAKK  246 (380)
T ss_pred             Ccc---C-CCCEEEECCcccCCCC-CCcEEEEEeh
Confidence            221   1 2336777999986533 5688888864

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.63  E-value=4.8e-14  Score=131.18  Aligned_cols=250  Identities=19%  Similarity=0.134  Sum_probs=154.0

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.++||..|--... .--.+|.+.+++.+++.....  +.......+.+..+++.+.+..+.+ ..+.++++++++
T Consensus        36 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~SGs  111 (425)
T PRK07495         36 DKEGRRYIDFAAGIAVVN-TGHRHPRVIAAVKAQLDRFTH--TCHQVVPYENYVRLAERLNALVPGD-FAKKTIFVTTGA  111 (425)
T ss_pred             eCCCCEEEEccccHHhhc-cCCCCHHHHHHHHHHHhhccC--cccCccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchH
Confidence            345889999987732111 123678899999999874321  1111111234444556565433211 125899999999


Q ss_pred             HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCc-------------EEEEeeccCCCCcccC----HHHHHhhc
Q 021547          121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHI-------------EVRHFDLLPERGWEVD----LEAVEALA  181 (311)
Q Consensus       121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~~~~~d----~~~l~~~l  181 (311)
                      +|++.+++.... .|+.+|+.....|.+....... .+.             .+..++..... .+++    ++.+++.+
T Consensus       112 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~  190 (425)
T PRK07495        112 EAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLF  190 (425)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHH
Confidence            999998887643 4446899888888765432221 110             12333322111 1122    34456654


Q ss_pred             C-----CCccEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547          182 D-----ENTAAIVIINPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS  255 (311)
Q Consensus       182 ~-----~~~~~i~i~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s  255 (311)
                      .     ++..++++......+| ..+|++.+++|.++|++||+++|+||+|.++...|.. ..+..   .+.+..|.++|
T Consensus       191 ~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~a~~~---~gv~pDi~tls  266 (425)
T PRK07495        191 KADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL-FAMEH---HEVAADLTTMA  266 (425)
T ss_pred             HhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc-eeecc---cCCCCCEEeeh
Confidence            3     2344555554443477 4579999999999999999999999999987666642 22222   22334567999


Q ss_pred             ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhh
Q 021547          256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l  308 (311)
                      |.++ +|+|+|+++++.        ++++.+... ...+++.++++++++.+.|
T Consensus       267 K~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l  311 (425)
T PRK07495        267 KGLA-GGFPLAAVTGRA--------EIMDAPGPGGLGGTYGGNPLGIAAAHAVL  311 (425)
T ss_pred             hhhc-CCccceEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHH
Confidence            9975 799999999853        356655443 3456788999999655554

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.63  E-value=1.4e-15  Score=133.90  Aligned_cols=192  Identities=15%  Similarity=0.119  Sum_probs=139.6

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecC
Q 021547           63 TAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR  142 (311)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~  142 (311)
                      +.|++.++|.+....+.  .|..+....++++.+++++        ..+..+++++||.+..++++++++++ +.|++..
T Consensus         7 ~~~~m~~a~~~a~~gd~--~Yg~D~~~~~l~~~i~~l~--------g~e~a~f~~sGT~An~~al~~~~~~~-~~vi~~~   75 (290)
T PF01212_consen    7 PTPAMLEAMAAANVGDD--AYGEDPTTARLEERIAELF--------GKEAALFVPSGTMANQLALRAHLRPG-ESVICAD   75 (290)
T ss_dssp             S-HHEEHHHHHTTSB-C--CTTSSHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHHHHTT-EEEEEET
T ss_pred             CCHHHHHHHHccccCCc--ccCCChhHHHHHHHHHHHc--------CCCEEEEeCCCChHHHHHHHHHHhcC-Cceeccc
Confidence            56889999966655443  6988888899999999999        44567899999999999999999999 9999999


Q ss_pred             CCCcch---HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCC-CccCCCHHHHHHHHHH
Q 021547          143 PGWPFY---ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNP-CGNVLTYQHLQKIAET  212 (311)
Q Consensus       143 p~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~np-tG~~~~~~~l~~l~~l  212 (311)
                      +.|...   .......|.+++.++..  +++.+++++|++.+..      ++++|++++|+|. .|.+++.+++++|.++
T Consensus        76 ~aHi~~~E~ga~~~~~G~~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~  153 (290)
T PF01212_consen   76 TAHIHFDETGAIEELSGAKLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISEL  153 (290)
T ss_dssp             TEHHHHSSTTHHHHHTTCEEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHH
T ss_pred             cceeeeeccchhhHhcCcEEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHH
Confidence            987633   23446699999988753  3268999999998754      5788999999875 5899999999999999


Q ss_pred             HHHhCCEEEEeccccC--CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547          213 ARKLGILVIADEVYGH--LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN  274 (311)
Q Consensus       213 ~~~~~~~li~D~ay~~--~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~  274 (311)
                      |++||+.++.|.+--.  ....+.++..+..+   -+ ++..|++|..++++   |.+++-+++
T Consensus       154 a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~---~D-~v~~~~tK~~g~~~---Gavl~~~~~  210 (290)
T PF01212_consen  154 AREHGLPLHMDGARLANAAAALGVSLAEIAAG---AD-SVSFGGTKNGGAPG---GAVLAGNKE  210 (290)
T ss_dssp             HHHHT-EEEEEETTHHHHHCHHHHHHHHHHTT---SS-EEEEETTSTT-SSS---EEEEEESHH
T ss_pred             HHhCceEEEEehhhHHHhhhcccccHHHHhhh---CC-EEEEEEEccccccc---ceEEEechH
Confidence            9999999999999532  11111122222221   12 55559999987776   777776543

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.63  E-value=2.8e-15  Score=136.57  Aligned_cols=175  Identities=17%  Similarity=0.199  Sum_probs=123.6

Q ss_pred             CCCCCCC-cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEE
Q 021547           82 CYAPMFG-LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR  160 (311)
Q Consensus        82 ~Y~~~~g-~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~  160 (311)
                      +...+.| +.+.++..|+.+..       ....++++|+|.++.+++.+++++| |+||+++.+|.+....+...|+.++
T Consensus        60 ~L~~p~G~I~eAe~~aA~~fGA-------d~t~flvnGsT~g~~a~i~a~~~~g-d~VLv~RN~HkSv~~alil~ga~Pv  131 (417)
T PF01276_consen   60 DLHDPEGIIKEAEELAARAFGA-------DKTFFLVNGSTSGNQAMIMALCRPG-DKVLVDRNCHKSVYNALILSGAIPV  131 (417)
T ss_dssp             BTTTTBTHHHHHHHHHHHHHTE-------SEEEEESSHHHHHHHHHHHHHTTTT-CEEEEETT--HHHHHHHHHHTEEEE
T ss_pred             cccCCccHHHHHHHHHHHhcCC-------CeEEEEecCchHHHHHHHHHhcCCC-CEEEEcCCcHHHHHHHHHHcCCeEE
Confidence            3444444 45777778888743       3467889999999999999999999 9999999999999999999999999


Q ss_pred             EeeccCCCC----cccCH-----HHHHhhcCC--CccE---EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc
Q 021547          161 HFDLLPERG----WEVDL-----EAVEALADE--NTAA---IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY  226 (311)
Q Consensus       161 ~~~~~~~~~----~~~d~-----~~l~~~l~~--~~~~---i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay  226 (311)
                      +++.. .+.    ..++.     +.+++.+++  ..++   +++++|++ .|.+++   +++|+++|+++++.|++||||
T Consensus       132 yi~p~-~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAh  206 (417)
T PF01276_consen  132 YIPPE-DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAH  206 (417)
T ss_dssp             EEEEE-E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT
T ss_pred             EecCC-ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccc
Confidence            99875 222    24455     888887753  4455   89999876 788888   999999999999999999999


Q ss_pred             cC-CccCCCCCCcccccC---CCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          227 GH-LAFGSTPYIPMGVFG---SIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       227 ~~-~~~~~~~~~~~~~~~---~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      +. +.|...+...+..-.   .+..++++.|.+|.  ++++.-+.++--
T Consensus       207 Gah~~F~~lp~~a~~~gad~~~~~~~~vvqS~HKt--L~altQts~lh~  253 (417)
T PF01276_consen  207 GAHFGFHPLPRSALALGADRPNDPGIIVVQSTHKT--LPALTQTSMLHV  253 (417)
T ss_dssp             -TTGGCSGGGTTCSSTTSS-CTSBEEEEEEEHHHH--SSS-TT-EEEEE
T ss_pred             cccccCCCCccchhhccCccccccceeeeechhhc--ccccccceEEEe
Confidence            86 444421211111111   23357999999998  566666555443

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.63  E-value=9.5e-14  Score=128.84  Aligned_cols=204  Identities=16%  Similarity=0.106  Sum_probs=147.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEE--EeCChHHHHHHHHHHHhc------
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIY--ITLGCMEAVEIILTVITR------  132 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~--~t~g~~~a~~~~~~~l~~------  132 (311)
                      .+..|.+.+.|...+..+.. ++...+...++.+.+.+++.+.+|.+-..+++.  +|+|+|+++..++.+...      
T Consensus        51 t~~~p~~~~~~~~~l~~~~~-np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~  129 (431)
T TIGR01788        51 TWMEPEARKLMDETINKNMI-DKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRM  129 (431)
T ss_pred             CCCCHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHH
Confidence            34567788888888764433 233334455788888888887777541113443  489999999988765531      


Q ss_pred             --CC----CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHH
Q 021547          133 --LG----AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL  206 (311)
Q Consensus       133 --~g----~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l  206 (311)
                        .|    ...|+++.-.|.++...++..|+++..++++. +++.+|++.|++.+++++.+|+++..+|.||.+.|   +
T Consensus       130 ~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idp---i  205 (431)
T TIGR01788       130 EAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYED---V  205 (431)
T ss_pred             HhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCC---H
Confidence              11    13799999999999999999999999998754 34679999999999999999999999999999999   9


Q ss_pred             HHHHHHHHHh------CCEEEEeccccCCcc---CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          207 QKIAETARKL------GILVIADEVYGHLAF---GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       207 ~~l~~l~~~~------~~~li~D~ay~~~~~---~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      ++|+++|+++      |+|+++|.+|+.+..   -++....+.   ...-.-+..|.+|.. ..-..+|.+++.++
T Consensus       206 ~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~---~~~~DSis~s~HK~~-~~P~g~G~l~~r~~  277 (431)
T TIGR01788       206 KALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR---LPRVKSINVSGHKYG-LVYPGVGWVIWRDE  277 (431)
T ss_pred             HHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC---CCCceEEEECchhcc-CCCCCcEEEEEeCh
Confidence            9999999999      999999999996331   122222222   111224666999974 33455888887654

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.62  E-value=8.5e-14  Score=128.45  Aligned_cols=246  Identities=14%  Similarity=0.087  Sum_probs=158.3

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      ++++++||..|--..+.+. .+|.+.+++.+++..... .+  .....+.+..+++++.+..    ..+.+++++++++|
T Consensus        34 dG~~~lD~~sg~~~~~lGh-~~p~v~~a~~~q~~~~~~-~~--~~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA  105 (395)
T PRK03715         34 NGKRYLDFIQGWAVNCLGH-CNPGMVEALAAQAEKLIN-PS--PAFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEA  105 (395)
T ss_pred             CCCEEEECCcChhhccCCC-CCHHHHHHHHHHHHhccc-cc--ccccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHH
Confidence            5889999987622222233 369999999998864321 11  1234567788899887532    24689999999999


Q ss_pred             HHHHHHHHhc------CCCCEEEecCCCCcchHH-HHHHcCcEEEEeeccC-CCCc----ccCHHHHHhhcCCCccEEEE
Q 021547          123 VEIILTVITR------LGAANILLPRPGWPFYES-FAKRNHIEVRHFDLLP-ERGW----EVDLEAVEALADENTAAIVI  190 (311)
Q Consensus       123 ~~~~~~~l~~------~g~d~Vl~~~p~~~~~~~-~~~~~g~~~~~~~~~~-~~~~----~~d~~~l~~~l~~~~~~i~i  190 (311)
                      ++.+++....      +|..+|+.....|++... .+...+.........+ ..++    ..|++.+++.+.+++.++++
T Consensus       106 ~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~  185 (395)
T PRK03715        106 NEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVML  185 (395)
T ss_pred             HHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEE
Confidence            9999988852      243678888887776533 3333332211000000 0111    24788999988877777777


Q ss_pred             eCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          191 INPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       191 ~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      ...++..|... +++.+++|.++|++||+++|+||++.++...|..+ ....++-.+++   .+++|.++. |+++|.++
T Consensus       186 Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~-a~~~~gv~PDi---~t~gK~lg~-G~p~~av~  260 (395)
T PRK03715        186 EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLF-AYELSGIEPDI---MTLGKGIGG-GVPLAALL  260 (395)
T ss_pred             eCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchh-hHhhcCCCCce---eeehhhhhC-CcceEEEE
Confidence            77677778765 68889999999999999999999999865455422 22223222233   478999864 79999998


Q ss_pred             eeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          270 TNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +...        +..........+++.+|++.+++.+.|+
T Consensus       261 ~~~~--------i~~~~~~~~~~T~~g~pl~~aaala~L~  292 (395)
T PRK03715        261 AKAE--------VAVFEAGDQGGTYNGNPLMTAVGVAVIS  292 (395)
T ss_pred             Eccc--------cccccCCCcCCCCCCCHHHHHHHHHHHH
Confidence            7542        3221112223355677888777666553

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.61  E-value=1.6e-13  Score=128.55  Aligned_cols=251  Identities=20%  Similarity=0.152  Sum_probs=155.8

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.+|||..|--... .--.+|.+.+++.+++....  .+.......+.+..+++.+.+..+.. ..+.++++++|++
T Consensus        53 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~sGse  128 (443)
T PRK06058         53 VDGNRLIDLGSGIAVTS-VGNSAPRVVEAVREQVARFT--HTCFMVTPYEGYVAVAEQLNRLTPGD-HEKRSALFNSGAE  128 (443)
T ss_pred             CCCCEEEEcCcchhhhc-cCCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCCC-CCCEEEEeCCcHH
Confidence            35888999987631111 12367899999999987432  22222223456666777776544311 1247889999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-Cc-------------EEEEeeccCCC-C---ccc--------CH
Q 021547          122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-HI-------------EVRHFDLLPER-G---WEV--------DL  174 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~-~---~~~--------d~  174 (311)
                      |++.+++.... .|+++|+...++|++....+... +.             .+..++..... .   ...        ..
T Consensus       129 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (443)
T PRK06058        129 AVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAI  208 (443)
T ss_pred             HHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHH
Confidence            99998885432 34478999999998876443321 10             11222211100 0   000        12


Q ss_pred             HHHHhhcCCCccEEEEeCCCC-CCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEe
Q 021547          175 EAVEALADENTAAIVIINPCN-PCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLG  252 (311)
Q Consensus       175 ~~l~~~l~~~~~~i~i~~p~n-ptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~  252 (311)
                      +.+++.+..+..+.++..|-+ ..|.. .+++.+++|.++|++||+++|.||++.++...|..+ ....++-.++++   
T Consensus       209 ~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~f-a~~~~gv~PDiv---  284 (443)
T PRK06058        209 TVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF-ACEHEGIVPDLI---  284 (443)
T ss_pred             HHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhh-HHHhcCCCCCEE---
Confidence            334444433334445556644 44554 457789999999999999999999999876655432 223333333444   


Q ss_pred             cCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          253 SISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       253 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +++|.++ .|+++|+++++.        ++++.+... ...+++.++++++++.+.|+
T Consensus       285 ~~gK~l~-~G~Pi~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~  333 (443)
T PRK06058        285 TTAKGIA-GGLPLSAVTGRA--------EIMDAPHPGGLGGTYGGNPVACAAALAAIE  333 (443)
T ss_pred             EEccccc-CCCccEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence            5589987 799999999853        466666544 34577899999999998875

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.61  E-value=6.9e-14  Score=130.46  Aligned_cols=252  Identities=17%  Similarity=0.070  Sum_probs=154.7

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.++||..|.-... .--.+|.+.+++.+++.......+.  .-..+.+..+++.+.+..+.  ..+.++++++|+
T Consensus        38 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~la~~l~~~~p~--~~~~v~f~~sGs  112 (423)
T PRK05964         38 LADGRELIDAISSWWVAT-HGHNHPYIDQAIREQLDRLDHVIFA--GFTHEPAERLAQRLVALTPG--GLDHVFFSDSGS  112 (423)
T ss_pred             eCCCCEEEEcchhHHhcc-CCCCCHHHHHHHHHHHhhCCCcccc--ccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcH
Confidence            346899999987722211 1235789999999998753211110  01123455566666654321  236899999999


Q ss_pred             HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHc-Cc------------EEEEeeccCCCCcccCHHHHHhh
Q 021547          121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRN-HI------------EVRHFDLLPERGWEVDLEAVEAL  180 (311)
Q Consensus       121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~~~d~~~l~~~  180 (311)
                      +|++.+++....       +|+.+|+.....|.+....+... +-            ....++....+....+++.+++.
T Consensus       113 eA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~  192 (423)
T PRK05964        113 VAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEAL  192 (423)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHH
Confidence            999998887642       34468998888887654332221 11            11222221111011126777777


Q ss_pred             cC---CCccEEEEeC-CCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547          181 AD---ENTAAIVIIN-PCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS  255 (311)
Q Consensus       181 l~---~~~~~i~i~~-p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s  255 (311)
                      +.   ++..++++.. .++..|... +.+.+++|.++|++||+++|+||++.++...|..+ ....++..+++   .+++
T Consensus       193 l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~-a~~~~~v~pDi---~~~~  268 (423)
T PRK05964        193 LEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLF-ACEQAGVSPDI---MCLS  268 (423)
T ss_pred             HHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-HHHhcCCCCCe---eeee
Confidence            64   2444555544 367778755 88999999999999999999999998775555321 22222222223   3788


Q ss_pred             ccCCCCcceeeEEEeeCCCCccchhhHHHHHhh-------hhccccCCCchhHHHHHhhhh
Q 021547          256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |.++..++++|++++..        ++++.+..       ..+.+++.++++.+++.+.|+
T Consensus       269 K~l~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~  321 (423)
T PRK05964        269 KGLTGGYLPLAATLCTA--------EIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLD  321 (423)
T ss_pred             hhhhcCcccceEEEEcH--------HHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHH
Confidence            99876558999988743        46666642       122345678888887776664

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.59  E-value=4.7e-13  Score=124.70  Aligned_cols=205  Identities=19%  Similarity=0.156  Sum_probs=155.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC-------
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL-------  133 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~-------  133 (311)
                      ..+++...+++...+..+.. .....++..++.+.+..++.+.++.+ ..-.-.+|+|+|+++.+.+.+....       
T Consensus        72 ~~~~~~a~~~~~~~~~~nl~-d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~  149 (460)
T COG0076          72 TRVPPVAAELLVSALNKNLG-DPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALA  149 (460)
T ss_pred             CCCHHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhh
Confidence            34567777777777765432 22233477899999999999988866 3345688999999998777666321       


Q ss_pred             -C-----CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE--EEEeCCCCCCccCCCHHH
Q 021547          134 -G-----AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA--IVIINPCNPCGNVLTYQH  205 (311)
Q Consensus       134 -g-----~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~--i~i~~p~nptG~~~~~~~  205 (311)
                       +     .-+|+++.-.|.++...+..+|++...+++.+. ++.+|++++++.+.+++..  |+-+.++.++|.+-+   
T Consensus       150 ~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDd---  225 (460)
T COG0076         150 ESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDD---  225 (460)
T ss_pred             cccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCccCC---
Confidence             1     126999999999999999999999999998765 7899999999999987776  888888999999988   


Q ss_pred             HHHHHHHHHHhCCEEEEeccccCCcc--CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547          206 LQKIAETARKLGILVIADEVYGHLAF--GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN  274 (311)
Q Consensus       206 l~~l~~l~~~~~~~li~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~  274 (311)
                      +++|.++|+++++|++||.||+++..  ..... . ..+.-..-.=+..+++|. |..=..+||++..+++
T Consensus       226 i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~-~-~~f~l~~vdSIt~d~HK~-g~aP~~~G~il~rd~e  293 (460)
T COG0076         226 IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDG-R-WDFGLEGVDSITVDGHKY-GLAPIGCGVVLFRDEE  293 (460)
T ss_pred             HHHHHHHHHHcCCcEEEEccccceeecccCccc-h-hhcCCCCceEEEECcccc-cCCCCCceEEEEECHH
Confidence            99999999999999999999998653  22111 1 011111222445599998 6777899999998864

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.58  E-value=4e-13  Score=125.78  Aligned_cols=252  Identities=17%  Similarity=0.080  Sum_probs=152.8

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCC-EEEeCCh
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADD-IYITLGC  119 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~-v~~t~g~  119 (311)
                      ..+++.++||..|.-... .--.+|.+.+++.+++.........  .-..+.+..+++.+....+....... ++++++|
T Consensus        35 D~dG~~ylD~~~g~~~~~-lGh~~p~i~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sG  111 (442)
T TIGR00709        35 DVEGKEYLDFLAGAGTLA-LGHNHPNMKQKILDYLQSGLPLHTL--DLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSG  111 (442)
T ss_pred             eCCCCEEEEccccHhhhc-CCCCCHHHHHHHHHHHHhccCcccc--ccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCH
Confidence            345889999987732211 1235789999999998753211110  11234556667777654331111124 5667899


Q ss_pred             HHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-C------------cEEEEeeccCCCC--ccc----CH----H
Q 021547          120 MEAVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-H------------IEVRHFDLLPERG--WEV----DL----E  175 (311)
Q Consensus       120 ~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g------------~~~~~~~~~~~~~--~~~----d~----~  175 (311)
                      ++|++.+++.... .|+.+|+.....|.+....+... +            ..+..++......  +..    +.    +
T Consensus       112 sEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (442)
T TIGR00709       112 ADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIE  191 (442)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHH
Confidence            9999998887653 44468998888888765433322 2            0122222211000  000    11    1


Q ss_pred             HHHhhcC------CCccEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547          176 AVEALAD------ENTAAIVIINPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV  248 (311)
Q Consensus       176 ~l~~~l~------~~~~~i~i~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~  248 (311)
                      .+++.+.      .++.++++...++..| ..++++.++++.++|++||+++|.||++.++...|. +.....+...+++
T Consensus       192 ~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~-~~a~~~~gv~PDi  270 (442)
T TIGR00709       192 YFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGT-MFAFEHAGIEPDF  270 (442)
T ss_pred             HHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCc-hhHHHHcCCCCcE
Confidence            2333331      3455666665554445 457999999999999999999999999999876664 3333344434444


Q ss_pred             EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh-hhccccCCCchhHHHHHhhhh
Q 021547          249 ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       249 i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++   ++|.++. |+++|+++++..         ++.+.. ....+++.++++++++.+.|+
T Consensus       271 v~---~gK~l~~-G~Pigav~~~~~---------~~~~~~~~~~~T~~gnpla~aaa~a~L~  319 (442)
T TIGR00709       271 VV---MSKAVGG-GLPLAVLLIAPE---------FDAWQPAGHTGTFRGNQLAMVTGTEALN  319 (442)
T ss_pred             EE---EcccccC-CcccEEEEEchH---------HhccCCCcCCCCCCcCHHHHHHHHHHHH
Confidence            43   8999876 899999998542         122211 234567889999999988875

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.58  E-value=2.1e-13  Score=125.18  Aligned_cols=184  Identities=20%  Similarity=0.143  Sum_probs=133.5

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcc-hHHHHHHcCcEEE
Q 021547           82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPF-YESFAKRNHIEVR  160 (311)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~-~~~~~~~~g~~~~  160 (311)
                      .|..++.+.+|++++++++        ..+.++.+++|+.|+.+++...+++| |.|  +...|.. ....+...|...+
T Consensus        73 ~Yagd~s~~~LE~~vAe~l--------G~e~aV~v~sGTaAl~ll~~l~v~pG-d~V--p~n~~f~Tt~ahI~~~Ga~fv  141 (460)
T PRK13237         73 AYAGSRNFYHLEETVQEYY--------GFKHVVPTHQGRGAENLLSRIAIKPG-QYV--PGNMYFTTTRYHQELNGGIFV  141 (460)
T ss_pred             hhcCCCcHHHHHHHHHHHH--------CCCeEEEeCCHHHHHHHHHHhCCCCc-CEE--CCccchHhhHHHHHhCCcEEE
Confidence            5998889999999999999        34579999999999998877778899 865  4444443 3344677887554


Q ss_pred             Eeecc--------CCCCcccCHHHHHhhcCCC----ccEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 021547          161 HFDLL--------PERGWEVDLEAVEALADEN----TAAIVIINPCNPC-GNVLTYQHLQKIAETARKLGILVIADEVYG  227 (311)
Q Consensus       161 ~~~~~--------~~~~~~~d~~~l~~~l~~~----~~~i~i~~p~npt-G~~~~~~~l~~l~~l~~~~~~~li~D~ay~  227 (311)
                      .+...        ...++.+|++.|++.++++    ++++.+..++|.. |+.+|.++++++.++|++||+.||+|.++.
T Consensus       142 Di~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra  221 (460)
T PRK13237        142 DIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRC  221 (460)
T ss_pred             eeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcch
Confidence            44211        1245789999999988753    3456777777877 799999999999999999999999999997


Q ss_pred             CC----c------cCCCCCC----cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547          228 HL----A------FGSTPYI----PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       228 ~~----~------~~~~~~~----~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      .-    .      |.+.+..    .+..+.    .+.+.|++|.++.+-  -|+|++.++       ++.++++..
T Consensus       222 ~gna~fI~~re~~y~~~~i~ei~~e~~s~a----D~~t~S~~K~~~~~~--GG~i~t~D~-------eL~~~~r~~  284 (460)
T PRK13237        222 VENAYFIKEREEGYQDKSIKEIVHEMFSYA----DGCTMSGKKDCLVNI--GGFLAMNDE-------ELFDEAKEL  284 (460)
T ss_pred             hcChhhhcccccccCCCcHhHHhhhccCcC----cEEEEeCCCCCCCCC--ceEEEECCH-------HHHHHHHHh
Confidence            32    1      2232211    111222    267778999977661  288887764       478888876

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.57  E-value=4.6e-13  Score=122.73  Aligned_cols=252  Identities=16%  Similarity=0.112  Sum_probs=165.0

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      +.+++.+|||..|--..- .--.+|.+.++++++++.....++...  ..+-...+++.|.+..... ..+.++++++|+
T Consensus        52 DvdG~~ylDf~sgi~v~~-~GH~hP~Vv~Av~~q~~~~~h~~~~~~--~~e~~v~~ae~L~~~~p~~-~~~~~~f~~sGa  127 (447)
T COG0160          52 DVDGNEYLDFLSGIAVLN-LGHNHPRVVEAVKRQLAKLNHTHTRDL--YYEPYVELAEKLTALAPGS-GLKKVFFGNSGA  127 (447)
T ss_pred             eCCCCEEEEcccCcchhc-cCCCCHHHHHHHHHHHHHhhcccCCcc--cchhHHHHHHHHHHhCCcc-cCCeEEecCCcH
Confidence            345899999998632211 123789999999998875331122221  1144555666665533321 456799999999


Q ss_pred             HHHHHHHHHHhc-CCCCEEEecCCCCcchHH-HHHHcC-------------cEEEEeeccCC--CCccc--------CHH
Q 021547          121 EAVEIILTVITR-LGAANILLPRPGWPFYES-FAKRNH-------------IEVRHFDLLPE--RGWEV--------DLE  175 (311)
Q Consensus       121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~-~~~~~g-------------~~~~~~~~~~~--~~~~~--------d~~  175 (311)
                      +|++++++.-.. .|...||.....|.+... .....+             ..+..+|....  ..+..        ..+
T Consensus       128 eA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~  207 (447)
T COG0160         128 EAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALE  207 (447)
T ss_pred             HHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHH
Confidence            999999887753 333678888888765322 111111             12444443221  11111        233


Q ss_pred             HHHhhcC------CCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547          176 AVEALAD------ENTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV  248 (311)
Q Consensus       176 ~l~~~l~------~~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~  248 (311)
                      .+++.+.      .++.++++...+...|... |++.++++.++|++||+++|+||++.++..+| .+..+...+-.+++
T Consensus       208 ~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG-~~fa~E~~gv~PDi  286 (447)
T COG0160         208 YIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG-KMFAFEHFGVEPDI  286 (447)
T ss_pred             HHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-cchhhhhcCCCCCE
Confidence            4444332      1455566666688888754 56669999999999999999999999998888 66777777666666


Q ss_pred             EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          249 ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       249 i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |   +++|.++. |+++|.++...        ++++..-.....++..|+++.+++.+.|+
T Consensus       287 v---t~aK~ig~-G~Pl~avv~r~--------ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~  335 (447)
T COG0160         287 V---TLAKSLGG-GLPLSAVVGRA--------EIMDWPPGGHGGTFGGNPVACAAALAVLD  335 (447)
T ss_pred             E---EecccccC-CCceeEEeccH--------HhcccCCcccCCCCCcCHHHHHHHHHHHH
Confidence            7   88999876 99999999853        35663333345568899999999888775

>PLN03032 serine decarboxylase; Provisional

Probab=99.57  E-value=1.1e-12  Score=119.33  Aligned_cols=194  Identities=16%  Similarity=0.057  Sum_probs=137.5

Q ss_pred             HHHHHHHHHHhcCCCCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCE--EEeCChHHHHHHHHHHHhc--CCCCEE
Q 021547           66 VAEDAIVDSVRSSMFNCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDI--YITLGCMEAVEIILTVITR--LGAANI  138 (311)
Q Consensus        66 ~~~~a~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v--~~t~g~~~a~~~~~~~l~~--~g~d~V  138 (311)
                      ...++|...+..+..+.+..   .....++.+.+.+++.+.+|.  .++++  ++|+|+|+++..++.+...  ++ ..|
T Consensus        38 ~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~--~~~~~~G~fTsGGTEaNl~al~~ar~~~~~-~~v  114 (374)
T PLN03032         38 GELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEL--EKDEYWGYITTCGTEGNLHGILVGREVFPD-GIL  114 (374)
T ss_pred             HHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCC--CCccCCEEEeCchHHHHHHHHHHHHHhCCC-cEE
Confidence            34666666654322112221   123466777777777766664  44555  9999999999888776542  45 689


Q ss_pred             EecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547          139 LLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARK  215 (311)
Q Consensus       139 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~  215 (311)
                      +++.-.|.+....++.+|.++..+|.+  .++.+|+++|++.+++   ++.+++++..+|++|.+.|   +++|+++|++
T Consensus       115 i~s~~~H~Sv~kaa~~lg~~~~~V~~d--~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~  189 (374)
T PLN03032        115 YASRESHYSVFKAARMYRMEAVKVPTL--PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKE  189 (374)
T ss_pred             EeCCCceeHHHHHHHHcCCCCeEeeeC--CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHH
Confidence            999999999999999999998888874  4568999999998876   4667777788999999988   8999999999


Q ss_pred             hC-----CEEEEeccccCCc--cCC-CCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          216 LG-----ILVIADEVYGHLA--FGS-TPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       216 ~~-----~~li~D~ay~~~~--~~~-~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      +|     +|+++|.+|+...  +.. .+...+.   . .-.-...|.+|..+. -..+|.+++.+
T Consensus       190 ~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~---~-~vDSis~s~HK~~g~-P~g~G~ll~r~  249 (374)
T PLN03032        190 LGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR---K-PIGSVSVSGHKFLGC-PMPCGVALTRK  249 (374)
T ss_pred             hCCCCCCeeEEEEccchhhhhhccCCCcccCCC---c-CCcEEEECcccccCC-CcCeEEEEEEc
Confidence            96     5999999998742  211 1111111   1 122456699998543 36688888865

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.56  E-value=5.9e-13  Score=124.15  Aligned_cols=251  Identities=18%  Similarity=0.122  Sum_probs=148.2

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEE-eCCh
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYI-TLGC  119 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~-t~g~  119 (311)
                      .+++.+|||..|--... .--.+|.+.+++.+++......  .......+.+..+++.+.+....+-..+ .+++ +++|
T Consensus        36 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~--~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sG  112 (425)
T PRK09264         36 EDGKEYIDFFAGAGALN-YGHNNPVLKQALIDYLQRDGIT--HGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTG  112 (425)
T ss_pred             CCCCEeeecccchhhcc-CCCCCHHHHHHHHHHHHhcccc--cccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCH
Confidence            45889999987732211 1236789999999988742111  0101112345555555554221111112 4655 5899


Q ss_pred             HHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-Cc------------EEEEeeccCCCCc-ccCHHHHHhhcCC-
Q 021547          120 MEAVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-HI------------EVRHFDLLPERGW-EVDLEAVEALADE-  183 (311)
Q Consensus       120 ~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~-~~d~~~l~~~l~~-  183 (311)
                      ++|++.+++.... .|+.+|+.....|.+....+... +.            .+..+|....... .-+++.+++.+.. 
T Consensus       113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~  192 (425)
T PRK09264        113 TNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDS  192 (425)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhc
Confidence            9999998887753 45468888888887654322211 10            1233332110000 0256777777642 


Q ss_pred             -----CccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCccc
Q 021547          184 -----NTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR  257 (311)
Q Consensus       184 -----~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~  257 (311)
                           +..++++.......|. .++++.+++|.++|++||+++|+||++.++...|.. .....++-.++++   +++|.
T Consensus       193 ~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~-~~~~~~~v~PDi~---t~~K~  268 (425)
T PRK09264        193 SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTF-FSFERAGITPDIV---TLSKS  268 (425)
T ss_pred             cCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHH-HHHhhcCCCCCEE---Eeccc
Confidence                 3445555555666776 568889999999999999999999999886555532 1222222233333   77899


Q ss_pred             CCCCcceeeEEEeeCCCCccchhhHHHHHhh-hhccccCCCchhHHHHHhhh
Q 021547          258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-CLGVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       258 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l  308 (311)
                      ++..|+++|++++++.        + ..+.. ....++..++++.+++.+.|
T Consensus       269 l~~~G~pigav~~~~~--------i-~~~~~~~~~~T~~gnp~~~aaa~a~l  311 (425)
T PRK09264        269 ISGYGLPMALVLIKPE--------L-DVWKPGEHNGTFRGNNLAFVTATAAL  311 (425)
T ss_pred             cCCCccceEEEEEchh--------h-hccCCCccCCCCCCCHHHHHHHHHHH
Confidence            8776999999998642        2 22222 22335567777776664544

>PRK15029 arginine decarboxylase; Provisional

Probab=99.55  E-value=2.7e-13  Score=132.11  Aligned_cols=173  Identities=12%  Similarity=0.005  Sum_probs=129.2

Q ss_pred             CCCCCCCc-HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEE
Q 021547           82 CYAPMFGL-PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR  160 (311)
Q Consensus        82 ~Y~~~~g~-~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~  160 (311)
                      +...+.|. .+..+..|+.++       .....++++|+|.++.+++.+++.+| |+||+++.+|.+..+.+...|+.++
T Consensus       199 ~L~~p~G~I~eAq~~aA~~fg-------A~~t~FlvNGST~gn~a~i~a~~~~g-d~Vlv~RN~HKSv~~al~L~ga~Pv  270 (755)
T PRK15029        199 SLLDHTGAFGESEKYAARVFG-------ADRSWSVVVGTSGSNRTIMQACMTDN-DVVVVDRNCHKSIEQGLILTGAKPV  270 (755)
T ss_pred             CCCCCCcHHHHHHHHHHHHhC-------CCcEEEEeCChhHHHHHHHHHhcCCC-CEEEeecccHHHHHHHHHHcCCeEE
Confidence            34444454 566666777673       23568899999999999999999999 9999999999999999999999999


Q ss_pred             EeeccCCCCc----ccC-----HHHHHhhcCC--Ccc--------EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547          161 HFDLLPERGW----EVD-----LEAVEALADE--NTA--------AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI  221 (311)
Q Consensus       161 ~~~~~~~~~~----~~d-----~~~l~~~l~~--~~~--------~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li  221 (311)
                      ++.... ..+    .++     .+.+++.+..  ..+        ++++++|++ .|.+++   +++|+++|+++++.|+
T Consensus       271 yl~P~~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~ll  345 (755)
T PRK15029        271 YMVPSR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLH  345 (755)
T ss_pred             Eecccc-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEE
Confidence            997543 222    334     7888887643  334        889999876 788888   9999999999999999


Q ss_pred             EeccccC-CccCCCCCCccccc-----C-CCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          222 ADEVYGH-LAFGSTPYIPMGVF-----G-SIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       222 ~D~ay~~-~~~~~~~~~~~~~~-----~-~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      +||||+. +.|.. .+.....+     . ....++++.|.+|.  +|++..|.++-
T Consensus       346 vDEAhGah~~F~~-~~p~~sa~~~~~~~~~Gad~~vvqStHKt--L~alTQaS~LH  398 (755)
T PRK15029        346 FDEAWYGYARFNP-IYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIH  398 (755)
T ss_pred             EECccccccccCc-cccccccccccccccCCCceEEEEchhhc--ccchhhhhhhe
Confidence            9999986 44442 12111222     1 12235999999998  57777776553

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.54  E-value=7.5e-14  Score=118.37  Aligned_cols=212  Identities=18%  Similarity=0.261  Sum_probs=145.4

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCC-EEEeCChHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADD-IYITLGCMEAV  123 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~-v~~t~g~~~a~  123 (311)
                      ...+||-..-     -..+..+++++|.++...+..  |+.++...+|++.+|+.+.+        |. +|+++| |.+.
T Consensus        21 ~~~vDLRSDT-----vT~PTdeMr~am~eA~vgDdV--yGeD~tt~rLE~~vA~l~GK--------EAgLFv~SG-TmgN   84 (384)
T KOG1368|consen   21 HRSVDLRSDT-----VTVPTDEMRRAMAEASVGDDV--YGEDPTTNRLEQRVAELFGK--------EAGLFVPSG-TMGN   84 (384)
T ss_pred             eecccccccc-----ccCChHHHHHHHhhcccCccc--ccCCccHHHHHHHHHHHhCc--------cceeeeccc-cccc
Confidence            3444555443     234568899999888766654  66556778999999999954        33 455555 4455


Q ss_pred             HHHHHHHh-cCCCCEEEecCCCCcc-hH--HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--------CccEEEEe
Q 021547          124 EIILTVIT-RLGAANILLPRPGWPF-YE--SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--------NTAAIVII  191 (311)
Q Consensus       124 ~~~~~~l~-~~g~d~Vl~~~p~~~~-~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--------~~~~i~i~  191 (311)
                      .++++.-| ++| .+||+.+.+|.- |.  ......|..+.++  .++++..++++++++.+..        -+++|++.
T Consensus        85 llaIm~Hc~~rg-~eii~gd~~HI~~~E~gg~s~l~gv~~~tv--~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclE  161 (384)
T KOG1368|consen   85 LLAIMVHCHQRG-SEIIVGDRAHIHRYEQGGISQLAGVHVRTV--KNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLE  161 (384)
T ss_pred             HHHHHHHhcCCC-ceEEeccchheeehhccChhhhccceeEee--eeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEee
Confidence            55555554 588 999999887753 22  2445556666655  5667788999999998862        47899999


Q ss_pred             CCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc--CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547          192 NPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAF--GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL  268 (311)
Q Consensus       192 ~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i  268 (311)
                      |.+|-+| .++|.|++.++.+||+++|+.++.|.+--+-.-  -|.+   +..+-..-+.|.| .|||.+|+|   +|.+
T Consensus       162 NT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~---vk~i~~~fDSVsi-CLSKglgAP---VGSV  234 (384)
T KOG1368|consen  162 NTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVP---VKKICSAFDSVSI-CLSKGLGAP---VGSV  234 (384)
T ss_pred             ccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCC---HHHHHHhhhhhhh-hhhccCCCC---cccE
Confidence            9876666 999999999999999999999999998653110  1222   1111111111333 799997665   7999


Q ss_pred             EeeCCCCccchhhHHHHHhhh
Q 021547          269 ATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      ++.+.+       ++++.+.+
T Consensus       235 iVG~k~-------FI~kA~~~  248 (384)
T KOG1368|consen  235 IVGSKD-------FIDKARHF  248 (384)
T ss_pred             EEccHH-------HHHHHHHH
Confidence            987754       77777666

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.54  E-value=1.5e-12  Score=120.96  Aligned_cols=252  Identities=16%  Similarity=0.083  Sum_probs=148.0

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCC-CCCCEEE-eCC
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKL-SADDIYI-TLG  118 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~-~~~~v~~-t~g  118 (311)
                      ..+++.+|||..|.-... .--.+|.+.+++.+++.....  +.......+.+..+++.+.+....+. ..+.+++ +++
T Consensus        31 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~--~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s  107 (412)
T TIGR02407        31 DEDGKEYIDFFAGAGALN-YGHNNPKLKQALIDYLADDGI--IHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPT  107 (412)
T ss_pred             eCCCCEEEEcccchhhcc-CCCCCHHHHHHHHHHHhhccc--eeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCC
Confidence            345889999987732211 123679999999998864211  11111123445556666654311010 1124655 589


Q ss_pred             hHHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCCc-ccCHHHHHhhcC-
Q 021547          119 CMEAVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERGW-EVDLEAVEALAD-  182 (311)
Q Consensus       119 ~~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~~-~~d~~~l~~~l~-  182 (311)
                      |++|++.+++.... .|+.+|+.....|.+....+.. .+.            .+..+|....... .-+++.+++.+. 
T Consensus       108 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~  187 (412)
T TIGR02407       108 GTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLED  187 (412)
T ss_pred             chHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHh
Confidence            99999998887753 4447899888888876433222 221            1222222110000 013566777664 


Q ss_pred             -----CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcc
Q 021547          183 -----ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISK  256 (311)
Q Consensus       183 -----~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK  256 (311)
                           +++.++++....++.|. ..+++.+++|.++|++||+++|+||++.++...|.-+ ......-.++++   +++|
T Consensus       188 ~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~-a~~~~~v~PDi~---~~~K  263 (412)
T TIGR02407       188 SSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFF-SFEPAGIEPDIV---CLSK  263 (412)
T ss_pred             ccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhH-HhcccCCCCCEE---Eech
Confidence                 23455665555788888 5788899999999999999999999998765444321 222222223333   6789


Q ss_pred             cCCCCcceeeEEEeeCCCCccchhhHHHHHh-hhhccccCCCchhHHHHHhhh
Q 021547          257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIK-ACLGVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       257 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~q~~~~~~l  308 (311)
                      .++..|+|+|+++++..        + ..+. .....++..++++.+++.+.|
T Consensus       264 ~lg~~G~pigav~~~~~--------~-~~~~~~~~~~T~~gnpl~~aaa~a~l  307 (412)
T TIGR02407       264 SISGYGLPLALTLIKPE--------L-DVWKPGEHNGTFRGNNLAFVTATAAL  307 (412)
T ss_pred             hccCCccceeEEEEchh--------h-hccCCCccCCCCCccHHHHHHHHHHH
Confidence            97544999999998642        2 2222 123345667888665544433

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.53  E-value=1.8e-12  Score=121.31  Aligned_cols=252  Identities=15%  Similarity=0.126  Sum_probs=151.5

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.++||..|.-....+ -.+|.+.+++.+++.....  +.......+....+++.+.+..+.. ..+.|+++++|+
T Consensus        38 D~dG~~ylD~~~g~~~~~lG-H~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lae~L~~~~p~~-~~~~v~f~~SGs  113 (445)
T PRK08593         38 DVDGKTYIDLLASASSQNVG-HAPPRVVEAIKAQADKFIH--YTPAYMYHEPLVRLAKKLCELAPGD-FEKRVTFGLSGS  113 (445)
T ss_pred             eCCCCEEEECCccHHhhcCC-CCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchH
Confidence            34588899997662211112 2579999999999874321  1111112234445555555433211 125899999999


Q ss_pred             HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHH-HcCc-------------EEEEeeccCCCC--cc-cC-------HH
Q 021547          121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAK-RNHI-------------EVRHFDLLPERG--WE-VD-------LE  175 (311)
Q Consensus       121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~-~~g~-------------~~~~~~~~~~~~--~~-~d-------~~  175 (311)
                      +|++.+++.... .|+.+|+.....|.+....+. ..+.             .+..++......  +. .+       ++
T Consensus       114 eA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  193 (445)
T PRK08593        114 DANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLA  193 (445)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHH
Confidence            999998886542 343678888888876543222 2221             122233211100  00 01       13


Q ss_pred             HHHhhcC-----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeE
Q 021547          176 AVEALAD-----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVI  249 (311)
Q Consensus       176 ~l~~~l~-----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i  249 (311)
                      .+++.+.     +++.++++.......|.. .+++.+++|.++|++||+++|.||++.++...|.. .....+.-.++++
T Consensus       194 ~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~-~a~~~~gv~pDi~  272 (445)
T PRK08593        194 PLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKW-SSISHFNITPDLM  272 (445)
T ss_pred             HHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchH-HHHHhcCCCCCEe
Confidence            3444332     345566666667777876 68888999999999999999999999877555432 1222233233333


Q ss_pred             EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                         +++|.++ .|+++|+++++.        ++++.+... ...+.+.++++++++.+.|+
T Consensus       273 ---t~gK~l~-~G~p~gav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~  321 (445)
T PRK08593        273 ---SFGKSLA-GGMPMSAIVGRK--------EIMESLEAPAHLFTTGANPVSCAAALATID  321 (445)
T ss_pred             ---eeccccc-CCcccEEEEEcH--------HHHhhhccCCCCCCCCCCHHHHHHHHHHHH
Confidence               8899976 689999999853        366666422 23466788888887777664

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.51  E-value=9e-13  Score=118.55  Aligned_cols=191  Identities=20%  Similarity=0.246  Sum_probs=144.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL  140 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~  140 (311)
                      .+.++.++++|.+.+-    .+.++  ....+.+.+.+.++..++.. +.+-+++++++|.++++++..+++|| |+||+
T Consensus        14 ~~v~~~V~~am~~~~~----~h~s~--~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pg-dkVLv   85 (383)
T COG0075          14 VPVPPRVLLAMARPMV----GHRSP--DFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPG-DKVLV   85 (383)
T ss_pred             CCCCHHHHHHhcCCCC----CCCCH--HHHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhccCCC-CeEEE
Confidence            5678888888775542    23333  44555566666666555532 33556778889999999999999999 99999


Q ss_pred             cCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh
Q 021547          141 PRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--NTAAIVIINPCNPCGNVLTYQHLQKIAETARKL  216 (311)
Q Consensus       141 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~  216 (311)
                      ...+..+  +.++++..|.+++.+...  .+-.++++++++.+++  +.+++++++.-.+||+..|   +++|+++|++|
T Consensus        86 ~~nG~FG~R~~~ia~~~g~~v~~~~~~--wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~  160 (383)
T COG0075          86 VVNGKFGERFAEIAERYGAEVVVLEVE--WGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEH  160 (383)
T ss_pred             EeCChHHHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc---HHHHHHHHHHc
Confidence            8888775  468999999999998754  4556899999999984  5778999999999999998   99999999999


Q ss_pred             CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          217 GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       217 ~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      |.++|+|.+-+.   ++. ...+..+.   -.+.+.+.-|.+++| -.+|.+.+++
T Consensus       161 g~l~iVDaVsS~---Gg~-~~~vd~wg---iDv~itgSQK~l~~P-PGla~v~~S~  208 (383)
T COG0075         161 GALLIVDAVSSL---GGE-PLKVDEWG---IDVAITGSQKALGAP-PGLAFVAVSE  208 (383)
T ss_pred             CCEEEEEecccC---CCc-ccchhhcC---ccEEEecCchhccCC-CccceeEECH
Confidence            999999999884   232 23333333   339999999998875 2356666654

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.51  E-value=1.3e-12  Score=118.87  Aligned_cols=241  Identities=17%  Similarity=0.118  Sum_probs=153.6

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.++||..|--... .--.+|.+.+++.++++....  +... -..+.+..+++.+.+..    ..+.+++++++++
T Consensus        21 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~--~~~~-~~~~~~~~la~~l~~~~----~~~~v~~~~SGse   92 (364)
T PRK04013         21 SQGRRYLDLIAGIGVNV-LGHNHPEWVEEMSEQLEKLVV--AGPM-FEHEEKEEMLEELSKWV----NYEYVYMGNSGTE   92 (364)
T ss_pred             CCCCEEEEcccChhhcc-CCCCCHHHHHHHHHHHHhcCC--ccCC-cCCHHHHHHHHHHHhhc----CCCEEEEeCchHH
Confidence            36889999977621111 123568888999999874321  1111 11223344444444322    2358999999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc--------CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC
Q 021547          122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKRN--------HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN  192 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~  192 (311)
                      |++++++.... .|+++|+....+|.+....+...        +......++.. -. ..|.+.+++.+.+++.++++..
T Consensus        93 A~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~-~~-~~d~~~l~~~i~~~~aAvivEp  170 (364)
T PRK04013         93 AVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKH-IP-FNDVEAAKEAITKETAAVIFEP  170 (364)
T ss_pred             HHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEE-ec-CCCHHHHHHHhcCCcEEEEEcC
Confidence            99999988753 44478999988888754332221        11100000000 00 1267888888887888888777


Q ss_pred             CCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          193 PCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       193 p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      .+...|... +++.++++.++|++||+++|.||++.++ ..|. ......++-.++++   +++|.++. |+++|.++..
T Consensus       171 i~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~-~~a~~~~gv~PDiv---~~gK~lgg-G~P~~a~~~~  244 (364)
T PRK04013        171 IQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGK-FLAIEHYKVEPDIV---TMGKGIGN-GVPVSLTLTN  244 (364)
T ss_pred             CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCc-hhHHHhcCCCCCEE---EecccccC-CceeEEEEec
Confidence            666666644 6677999999999999999999999987 5553 33333344444555   66999765 8999999875


Q ss_pred             CCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          272 DPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ..        + .  ......+++.+|++.+++.+.|+
T Consensus       245 ~~--------~-~--~~~~~~T~~gnp~~~aaa~a~l~  271 (364)
T PRK04013        245 FD--------V-E--RGKHGSTFGGNPLACKAVAVTLR  271 (364)
T ss_pred             cc--------c-c--CCCcCCCCCcCHHHHHHHHHHHH
Confidence            32        2 1  11234567889999888887764

>PRK06541 hypothetical protein; Provisional

Probab=99.50  E-value=5.6e-12  Score=118.41  Aligned_cols=251  Identities=16%  Similarity=0.127  Sum_probs=150.7

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.+|||..|.-... .--.+|.+.+++.+++.....  +.......+.+..+++.+.+..+  ...+.++++++|+
T Consensus        48 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGs  122 (460)
T PRK06541         48 DDRGKRYLDGLAGLFVVQ-VGHGRAELAEAAAKQAGTLAF--FPLWSYAHPPAIELAERLAALAP--GDLNRVFFTTGGS  122 (460)
T ss_pred             eCCCCEEEECCccHHhcc-CCCCCHHHHHHHHHHHhhCcC--ccccccCCHHHHHHHHHHHHhCC--CCcCEEEEcCCcH
Confidence            346889999987721111 123578999999999874321  11111112334445555554322  1236899999999


Q ss_pred             HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCC---cccC----
Q 021547          121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERG---WEVD----  173 (311)
Q Consensus       121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~---~~~d----  173 (311)
                      +|++.+++....       +|+.+|+....+|.+....+.. .+.            .+..++......   +.-+    
T Consensus       123 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  202 (460)
T PRK06541        123 EAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAF  202 (460)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHH
Confidence            999988886542       2347888888888765432221 111            122222111000   1112    


Q ss_pred             ----HHHHHhhcC---CCccEEEEeCC-CCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547          174 ----LEAVEALAD---ENTAAIVIINP-CNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS  244 (311)
Q Consensus       174 ----~~~l~~~l~---~~~~~i~i~~p-~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~  244 (311)
                          ++.+++.+.   .+..+.++..| +++.|.+.+ ++.+++|.++|++||+++|+||++.++...|..+ ....++-
T Consensus       203 ~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~-a~~~~gv  281 (460)
T PRK06541        203 GRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF-GCERFGY  281 (460)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhh-hhhhcCC
Confidence                256676664   24455566666 888998765 8889999999999999999999997664334322 2222332


Q ss_pred             CCCeEEEecCcccCCCCcc-eeeEEEeeCCCCccchhhHHHHHhhh-----hccccCCCchhHHHHHhhhh
Q 021547          245 IVPVITLGSISKRWIVPGW-RFGWLATNDPNGVLQKSGIVGSIKAC-----LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       245 ~~~~i~i~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .++++   +++|.++ .|+ ++|++++++        ++++.+...     ...++..++++.+++.+.|+
T Consensus       282 ~PDiv---t~gK~l~-~G~~pigav~~~~--------~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~  340 (460)
T PRK06541        282 VPDII---TCAKGIT-SGYSPLGAMIASD--------RLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLD  340 (460)
T ss_pred             CCCEE---Eeccccc-CCccceeEEEEcH--------HHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence            33334   5899976 686 999999854        356655421     22356677888777766553

>PLN02590 probable tyrosine decarboxylase

Probab=99.50  E-value=5.7e-12  Score=119.44  Aligned_cols=214  Identities=13%  Similarity=0.063  Sum_probs=145.4

Q ss_pred             CCCCCCCCCCcHHHHHHHHHHHhc---CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-----CCCEEEeCChHHHHHH
Q 021547           54 DPAAFPCFRTAAVAEDAIVDSVRS---SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLS-----ADDIYITLGCMEAVEI  125 (311)
Q Consensus        54 ~p~~~~~~~~~~~~~~a~~~~~~~---~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-----~~~v~~t~g~~~a~~~  125 (311)
                      +|.++..++.++.....+.+.+..   .....|...+...++++.+.+|+.+.+|.+-.     ...-++++|+|+++..
T Consensus       130 hP~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~  209 (539)
T PLN02590        130 SPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLV  209 (539)
T ss_pred             CCCeeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHH
Confidence            444444444444444555554432   22335767778899999999999998887642     1345778888888776


Q ss_pred             HHHHHhc-----------CCCCEEEecCCCCcchHHHHHHcCc---EEEEeeccCCCCcccCHHHHHhhcCCC------c
Q 021547          126 ILTVITR-----------LGAANILLPRPGWPFYESFAKRNHI---EVRHFDLLPERGWEVDLEAVEALADEN------T  185 (311)
Q Consensus       126 ~~~~l~~-----------~g~d~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~------~  185 (311)
                      ++.+...           +. -.|++.+..|..+..++..+|+   +++.++.+..+++.+|.+.|++.+.+.      +
T Consensus       210 al~aAR~~~~~~~g~~~~~~-~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P  288 (539)
T PLN02590        210 VVLAARDRILKKVGKTLLPQ-LVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIP  288 (539)
T ss_pred             HHHHHHHHHHhhhcccCCCC-EEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCc
Confidence            6555422           11 2566788899999999999998   477787755456899999999988542      2


Q ss_pred             cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcce
Q 021547          186 AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWR  264 (311)
Q Consensus       186 ~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r  264 (311)
                      -+|+.+..+..||.+-|   +++|.++|++||+|++||.+|+++..--..... +..+. .-+ =+..+++|+ +.....
T Consensus       289 ~~VvaTaGTT~tGaiDp---l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie-~AD-Sit~D~HK~-l~~p~~  362 (539)
T PLN02590        289 FFICATVGTTSSAAVDP---LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIE-NAD-SFNMNAHKW-LFANQT  362 (539)
T ss_pred             EEEEEEeCCCCCcccCC---HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCc-cCC-EEEECchhh-cCcCcC
Confidence            33444455789999988   999999999999999999999985421111111 11111 111 344599998 556688


Q ss_pred             eeEEEeeCCC
Q 021547          265 FGWLATNDPN  274 (311)
Q Consensus       265 ~G~i~~~~~~  274 (311)
                      +|.+++.++.
T Consensus       363 cg~llvr~~~  372 (539)
T PLN02590        363 CSPLWVKDRY  372 (539)
T ss_pred             EEEEEecCHH
Confidence            9999987753

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.49  E-value=9.6e-12  Score=116.39  Aligned_cols=251  Identities=17%  Similarity=0.127  Sum_probs=150.0

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.++||..|.-... .--.+|.+.+++.+++.....  +....-..+....+++.+....+.+ ..+.++++++|++
T Consensus        51 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lAe~L~~~~p~~-~~~~v~f~~SGsE  126 (441)
T PRK05769         51 VDGNVYLDFNAGIAVTN-VGHAHPKVVKAVKEQAEKFLH--YSLTDFYYEPAVELAERLVEIAPGG-FEKKVFFTNSGTE  126 (441)
T ss_pred             CCCCEEEECCCchhhcc-cCCCCHHHHHHHHHHHHhccC--ccCcccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHH
Confidence            35888999987732211 123578899999999874321  1111111244556666666543211 1368999999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-Cc-------------EEEEeeccCCCC--cc---------cCHH
Q 021547          122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-HI-------------EVRHFDLLPERG--WE---------VDLE  175 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~---------~d~~  175 (311)
                      |++.+++.... .|+.+|+.....|.+....+... +.             .+..++......  +.         -..+
T Consensus       127 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (441)
T PRK05769        127 SNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLD  206 (441)
T ss_pred             HHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHH
Confidence            99988876642 45478888888887754333221 11             122222210000  00         0123


Q ss_pred             HHHh-hcC-----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547          176 AVEA-LAD-----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV  248 (311)
Q Consensus       176 ~l~~-~l~-----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~  248 (311)
                      .+++ .++     .++.++++.......|.. .+++.+++|.++|++||+++|+||++.++...|..+ ....+.-.+++
T Consensus       207 ~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~-a~~~~gv~pDi  285 (441)
T PRK05769        207 FIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMF-AIEHFGVEPDI  285 (441)
T ss_pred             HHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccccee-hhhccCCCCCE
Confidence            3555 221     234445554446666774 467779999999999999999999999875555322 22233323334


Q ss_pred             EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          249 ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       249 i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +   +++|.++ .|+++|+++++.        +++.........+++.++++++++.+.|+
T Consensus       286 v---t~~K~l~-~G~p~gav~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~L~  334 (441)
T PRK05769        286 I---TLAKAIA-GGLPLGAVIGRA--------ELMFLPPGSHANTFGGNPVAAAAALATLE  334 (441)
T ss_pred             E---EEccccc-CCcccEEEEEeh--------hhhhcCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            4   5899987 689999998854        24433322334456678999888887764

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.49  E-value=2.3e-12  Score=128.96  Aligned_cols=177  Identities=14%  Similarity=0.138  Sum_probs=134.1

Q ss_pred             CCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH----HHHHHHHHHHhcC-CCC----EEEecCCCCcc
Q 021547           80 FNCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM----EAVEIILTVITRL-GAA----NILLPRPGWPF  147 (311)
Q Consensus        80 ~~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~----~a~~~~~~~l~~~-g~d----~Vl~~~p~~~~  147 (311)
                      .+.|.|   .+|+.++...+.+++.+..|    .+.|.++++++    .++.++++++.++ | |    .|+++...|..
T Consensus       554 ~hp~~p~~~~~g~~~~~~~~r~~la~i~g----~~~v~f~pnaga~ge~a~~~vi~~~~~~~G-d~~r~~vli~~~aH~s  628 (993)
T PLN02414        554 IHPFAPVDQAQGYQEMFEDLGDLLCEITG----FDSFSLQPNAGAAGEYAGLMVIRAYHLSRG-DHHRNVCIIPVSAHGT  628 (993)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHhC----CCeEEEcCCCcHHHHHHHHHHHHHHHhccC-CCCCCEEEeCCCcCcc
Confidence            445554   34555444444444444433    38899999988    8899999999866 7 7    89999999998


Q ss_pred             hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEec
Q 021547          148 YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE  224 (311)
Q Consensus       148 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~  224 (311)
                      ....+...|++++.++.+  .++.+|+++|++.+++   ++++|++++|+|-+|...+   +++|+++|+++|..+++|.
T Consensus       629 n~a~a~~~G~~vv~v~~d--~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~vDg  703 (993)
T PLN02414        629 NPASAAMCGMKIVVVGTD--AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYMDG  703 (993)
T ss_pred             CHHHHHHCCCEEEEeccC--CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEEEe
Confidence            888888899999999874  4557999999999984   7789999999999999877   9999999999999999999


Q ss_pred             cccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC----cceeeEEEeeC
Q 021547          225 VYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP----GWRFGWLATND  272 (311)
Q Consensus       225 ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~i~~~~  272 (311)
                      ++..-..   .......++   -.|+++|.+|+|+.|    |-.+|.+.+..
T Consensus       704 Aq~~a~~---~l~~p~~~G---aD~~~~s~HK~f~~P~G~GGPg~G~l~~~~  749 (993)
T PLN02414        704 ANMNAQV---GLTSPGFIG---ADVCHLNLHKTFCIPHGGGGPGMGPIGVKK  749 (993)
T ss_pred             cCHHhcc---CcCCccccC---CCEEEecCCccCCcCcccCCCCeeeEEEch
Confidence            9964211   111122222   238999999987743    56688887643

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.48  E-value=9.3e-12  Score=117.07  Aligned_cols=216  Identities=12%  Similarity=0.019  Sum_probs=138.3

Q ss_pred             hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCCCC-CCCcHH----HHH
Q 021547           25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----FNCYAP-MFGLPL----ARR   94 (311)
Q Consensus        25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~~-~~g~~~----lr~   94 (311)
                      ..++.+++..-.+     .....|+|--..      -..+|.+++++...+....     ...|.. ......    .|+
T Consensus        19 d~~~~~~~~~~~~-----~~~~~l~l~~se------n~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~   87 (452)
T PTZ00094         19 DPELYELIEKEKE-----RQIEGLELIASE------NFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQK   87 (452)
T ss_pred             CHHHHHHHHHHHH-----HHHcCeeEeccc------ccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHH
Confidence            5667777664222     246778887775      2457889999888775321     111211 111222    344


Q ss_pred             HHHHHHhhcCCCCCCCCCEEEe---CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHH--------cC--cEEEE
Q 021547           95 AVAEYLNRDLPYKLSADDIYIT---LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKR--------NH--IEVRH  161 (311)
Q Consensus        95 ~ia~~l~~~~g~~~~~~~v~~t---~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~--------~g--~~~~~  161 (311)
                      .++++++      ..++++.++   +|+++++.+++.++.++| |+|++....|.........        .+  +++..
T Consensus        88 ~~a~lf~------a~~~~~~~~~~~~sgt~an~~v~~al~~~g-d~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~  160 (452)
T PTZ00094         88 RALEAFG------LDPEEWGVNVQPYSGSPANFAVYTALLQPH-DRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLP  160 (452)
T ss_pred             HHHHHhC------CCcccceeecCCCchHHHHHHHHHHhcCCC-CEEEecccccCCcccccccccccccccceeeeeeee
Confidence            5555663      355667666   788999999999999999 9999988777665432211        11  23334


Q ss_pred             eeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCcc
Q 021547          162 FDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIPM  239 (311)
Q Consensus       162 ~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~~  239 (311)
                      ++++  .++.+|+++|++.+++ +++++++.  ++.+|...|   +++|.++|+++|+++++|++|+.-..... ...++
T Consensus       161 ~~~~--~~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~  233 (452)
T PTZ00094        161 YQVN--EKGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF  233 (452)
T ss_pred             cccC--CCCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC
Confidence            4333  3467999999998854 56666553  345899988   88888999999999999999986333211 11121


Q ss_pred             cccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          240 GVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       240 ~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      .     +..+++.|.+|+++.|.  -|++.+..
T Consensus       234 ~-----~~D~l~~S~hK~l~GP~--Gg~l~~~~  259 (452)
T PTZ00094        234 P-----YADVVTTTTHKSLRGPR--SGLIFYRK  259 (452)
T ss_pred             C-----CCcEEEcCCccCCCCCC--ceEEEEec
Confidence            1     23388999999864443  37777743

>PLN02880 tyrosine decarboxylase

Probab=99.48  E-value=1.5e-12  Score=122.88  Aligned_cols=186  Identities=12%  Similarity=0.040  Sum_probs=133.5

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhcCCCCCCC-----CCEEEeCChHHHHHHHHHHHhc-----C-----CCCEEEecCCCCc
Q 021547           82 CYAPMFGLPLARRAVAEYLNRDLPYKLSA-----DDIYITLGCMEAVEIILTVITR-----L-----GAANILLPRPGWP  146 (311)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-----~~v~~t~g~~~a~~~~~~~l~~-----~-----g~d~Vl~~~p~~~  146 (311)
                      .|...+...++++.+.+|+.+.+|.+-..     ..-++|+|+|+++..++.+-..     .     ..-.|++++..|.
T Consensus       113 ~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~  192 (490)
T PLN02880        113 SWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHS  192 (490)
T ss_pred             ccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchH
Confidence            46556678999999999999988865321     2467788989887666555432     1     1025667888999


Q ss_pred             chHHHHHHcCcE---EEEeeccCCCCcccCHHHHHhhcCC-----CccEE-EEeCCCCCCccCCCHHHHHHHHHHHHHhC
Q 021547          147 FYESFAKRNHIE---VRHFDLLPERGWEVDLEAVEALADE-----NTAAI-VIINPCNPCGNVLTYQHLQKIAETARKLG  217 (311)
Q Consensus       147 ~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~i-~i~~p~nptG~~~~~~~l~~l~~l~~~~~  217 (311)
                      ....++..+|+.   ++.+|.+..+++.+|.+.|++.+.+     ....+ +.+..+..+|.+.|   +++|+++|++||
T Consensus       193 Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~~~~  269 (490)
T PLN02880        193 ALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAKSNG  269 (490)
T ss_pred             HHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHHHcC
Confidence            999999999995   6778775555778999999998753     22344 44445789999999   999999999999


Q ss_pred             CEEEEeccccCCccCCCCCC-cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          218 ILVIADEVYGHLAFGSTPYI-PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       218 ~~li~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      +|++||.+|++...-...+. .+..+  ..-.-+..+++|++ +....+|.+++.+.
T Consensus       270 iwlHVDaA~gg~~~~~~~~~~~l~gi--e~aDSit~d~HKwl-~~P~~~g~llvr~~  323 (490)
T PLN02880        270 MWFHVDAAYAGSACICPEYRHYIDGV--EEADSFNMNAHKWF-LTNFDCSLLWVKDR  323 (490)
T ss_pred             CEEEEehhhHHHHHhCHHHHHHhcCc--hhcCEEEECchhhc-CCCccEEEEEEeCH
Confidence            99999999998543111110 11111  11126677999984 66788999998753

>PLN02263 serine decarboxylase

Probab=99.47  E-value=2.5e-11  Score=112.50  Aligned_cols=175  Identities=18%  Similarity=0.030  Sum_probs=131.7

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeecc
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLL  165 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~  165 (311)
                      +..++++.+.+|+.+.+|.+-+.-.-.+|+|||+++..++.+-.+  +. ..++++...|.++..+++.+|++++.+|.+
T Consensus       130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~-~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d  208 (470)
T PLN02263        130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRMECVKVDTL  208 (470)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCC-cEEEEcCCccHHHHHHHHhcCCcceEeccC
Confidence            568899999999999888653222358899999999887777654  23 478899999999999999999999999874


Q ss_pred             CCCCcccCHHHHHhhcCCCc---cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCC-----EEEEeccccCCcc---CCC
Q 021547          166 PERGWEVDLEAVEALADENT---AAIVIINPCNPCGNVLTYQHLQKIAETARKLGI-----LVIADEVYGHLAF---GST  234 (311)
Q Consensus       166 ~~~~~~~d~~~l~~~l~~~~---~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~-----~li~D~ay~~~~~---~~~  234 (311)
                        .++.+|.+.|++.+.++.   .+|+.+.++.++|.+-|   +++|.++|+++|+     |+++|.+|+++..   ...
T Consensus       209 --~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~  283 (470)
T PLN02263        209 --VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRA  283 (470)
T ss_pred             --CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccc
Confidence              567899999999886543   34445566889999988   9999999999996     9999999988543   111


Q ss_pred             CCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          235 PYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       235 ~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      +...   +...-.-| ..+.+|. +..-..+|.+++.++
T Consensus       284 ~~~d---f~~~vDSI-svD~HK~-l~~P~~cgvll~R~~  317 (470)
T PLN02263        284 PKVT---FKKPIGSV-SVSGHKF-VGCPMPCGVQITRME  317 (470)
T ss_pred             cccC---CCcCccEE-EECCccc-cCCCcCEEEEEEehh
Confidence            1111   11111123 4499998 556688999998753

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.45  E-value=1.9e-11  Score=113.59  Aligned_cols=223  Identities=14%  Similarity=0.047  Sum_probs=145.2

Q ss_pred             hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCcHHHHHHHHH
Q 021547           25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS------MFNCYAPMFGLPLARRAVAE   98 (311)
Q Consensus        25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~   98 (311)
                      ..+|.++++.-.++     ....|+|--..      -..++.+++++...+.+-      ....|.....+.+++....+
T Consensus        34 d~~~~~~~~~e~~r-----q~~~l~LiasE------N~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~  102 (493)
T PRK13580         34 EPRIAEAIRQELAD-----QRSSLKLIASE------NYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAE  102 (493)
T ss_pred             CHHHHHHHHHHHHH-----HhcCceEeccc------ccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHH
Confidence            45666666543222     45667776554      235688888887666421      11234455566777777777


Q ss_pred             HHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC-------------------------------CCCEEEecCCCCcc
Q 021547           99 YLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL-------------------------------GAANILLPRPGWPF  147 (311)
Q Consensus        99 ~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~-------------------------------g~d~Vl~~~p~~~~  147 (311)
                      ..++.||..  .-+|-.-+| +.|+.+++.++++|                               | |+|+..++...+
T Consensus       103 ra~~lf~a~--~anvqp~Sg-~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~g-d~i~~l~l~~GG  178 (493)
T PRK13580        103 HAKELFGAE--HAYVQPHSG-ADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGN-QRLLGMSLDSGG  178 (493)
T ss_pred             HHHHHhCCC--cccccCCCc-HHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCC-CEEEeecCCCCC
Confidence            777766533  345666565 66888899999876                               7 999987655543


Q ss_pred             hHH---HHHHcC--cEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547          148 YES---FAKRNH--IEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA  222 (311)
Q Consensus       148 ~~~---~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~  222 (311)
                      ...   .....+  .+...+++++ .++.+|.+.+++.++++++.++++..+|-.+ ..|   +++|.++|+++|.++++
T Consensus       179 Hlthg~~~n~~~~~~~~~~y~vd~-~~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~d---l~~i~eia~~~gA~L~V  253 (493)
T PRK13580        179 HLTHGFRPNISGKMFHQRSYGVDP-DTGLLDYDEIAALAREFKPLILVAGYSAYPR-RVN---FAKLREIADEVGAVLMV  253 (493)
T ss_pred             eeecCcccchhhheeeeEecccCc-ccCccCHHHHHHHHhhcCCEEEEeCccccCC-CcC---HHHHHHHHHHcCCEEEE
Confidence            211   111222  5566666643 3457999999999999999999998876644 667   99999999999999999


Q ss_pred             eccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          223 DEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       223 D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      |++|..-.+.+.-... ....  ....|+++|++|++.  |-+.|+|+++
T Consensus       254 D~AH~~Gligg~~~~~~~~~~--~~~D~vtgT~hKaL~--GP~GG~I~~~  299 (493)
T PRK13580        254 DMAHFAGLVAGKVFTGDEDPV--PHADIVTTTTHKTLR--GPRGGLVLAK  299 (493)
T ss_pred             ECchhhceeccccchhhcCCC--CCCcEEEeCChhhcc--CCCeEEEEec
Confidence            9999975544222110 0001  122389999999863  3334888775

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.45  E-value=1.4e-11  Score=114.80  Aligned_cols=248  Identities=15%  Similarity=0.069  Sum_probs=150.4

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      .+++.++||..|.-.. ..--.+|.+.+++.+++..... ..|..    .+.+..+++.+.+..+.  ..+.++++++|+
T Consensus        72 ~dG~~ylD~~~g~~~~-~lGh~hp~v~~Av~~ql~~l~~~~~~~~----~~~~~~lAe~L~~~~p~--~~~~v~f~~SGs  144 (442)
T TIGR03372        72 TQGNEFIDCLGGFGIF-NVGHRNPNVIAAVENQLAKQPLHSQELL----DPLRALLAKTLAALTPG--KLKYSFFCNSGT  144 (442)
T ss_pred             CCCCEEEECCccHHhh-hcCCCCHHHHHHHHHHHHhCCCcccccC----CHHHHHHHHHHHHhCCC--CcCEEEEeCCch
Confidence            3588899997771110 1123678999999999874321 12222    33445566666543321  225799999999


Q ss_pred             HHHHHHHHHHhc----CCCCEEEecCCCCcchHHHHHHc-CcEEE---EeeccCCCC--cccCHHHHHhhcC------CC
Q 021547          121 EAVEIILTVITR----LGAANILLPRPGWPFYESFAKRN-HIEVR---HFDLLPERG--WEVDLEAVEALAD------EN  184 (311)
Q Consensus       121 ~a~~~~~~~l~~----~g~d~Vl~~~p~~~~~~~~~~~~-g~~~~---~~~~~~~~~--~~~d~~~l~~~l~------~~  184 (311)
                      +|++++++....    .|+.+|+.....|.+....+... +....   ..+..+.-.  ...|.+.+++.+.      .+
T Consensus       145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~  224 (442)
T TIGR03372       145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDD  224 (442)
T ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCc
Confidence            999998887643    25468998888887754333322 21100   011100000  0125566665553      23


Q ss_pred             ccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-
Q 021547          185 TAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG-  262 (311)
Q Consensus       185 ~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-  262 (311)
                      ..++++.......|... +++.++++.++|++||+++|+||++.++...|. ......++-.++++   +++|.++ .| 
T Consensus       225 vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~-~~a~e~~gv~PDiv---t~gK~lg-~G~  299 (442)
T TIGR03372       225 VAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGK-MFACEHEGVQPDIL---CLAKALG-GGV  299 (442)
T ss_pred             EEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcccc-chhhhhcCCCCCee---eehhhhc-CCc
Confidence            44555555566667755 677799999999999999999999987654453 22333333333444   5899975 57 


Q ss_pred             ceeeEEEeeCCCCccchhhHHHHHhh--h-hccccCCCchhHHHHHhhhh
Q 021547          263 WRFGWLATNDPNGVLQKSGIVGSIKA--C-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       263 ~r~G~i~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +++|.+++.+        ++.+.+..  + .+.+++.+|++.+++.+.|+
T Consensus       300 ~Pigavv~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~  341 (442)
T TIGR03372       300 MPIGATIATE--------AVFSVLFDNPFLHTTTFGGNPLACAAALATIN  341 (442)
T ss_pred             ccceEEEecH--------HHHHhhhccCccccCCCCCCHHHHHHHHHHHH
Confidence            6899998753        36666532  1 33456778888888777664

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.44  E-value=2e-11  Score=114.80  Aligned_cols=245  Identities=16%  Similarity=0.102  Sum_probs=150.9

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.+|||..|.-... .--.+|.+.+++.+++.....  +..   ..+.+..+++.+.+..+   ..+.+++++++++
T Consensus        96 ~dG~~yiD~~~g~g~~~-lGh~~p~v~~av~~ql~~~~~--~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGsE  166 (474)
T PLN02482         96 VDGNEYIDYVGSWGPAI-IGHADDEVLAALAETMKKGTS--FGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGTE  166 (474)
T ss_pred             CCCCEEEEecccccccc-cCCCCHHHHHHHHHHHhhCCC--CCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChHH
Confidence            34788889876632211 123578999999999875432  222   12455566777765443   2478999999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEecCCCCcchHHHH-HHc--CcEEE------EeeccCCCC----cccCHHHHHhhcCC---C
Q 021547          122 AVEIILTVITR-LGAANILLPRPGWPFYESFA-KRN--HIEVR------HFDLLPERG----WEVDLEAVEALADE---N  184 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~-~~~--g~~~~------~~~~~~~~~----~~~d~~~l~~~l~~---~  184 (311)
                      |++.+++.... .|+.+|+....+|.+..... ...  +....      .++.....+    ..-|++.+++.+..   +
T Consensus       167 A~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~  246 (474)
T PLN02482        167 ACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGE  246 (474)
T ss_pred             HHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCc
Confidence            99998887753 45478888888888754211 110  00000      000000000    00167888887752   3


Q ss_pred             ccEEEEeCCCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547          185 TAAIVIINPCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW  263 (311)
Q Consensus       185 ~~~i~i~~p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~  263 (311)
                      ..++++.......|.+.+ ++.+++|.++|++||+++|+||++.++ ..+. ......++-.+++   .+++|.++ .|+
T Consensus       247 iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~-~ga~~~~gv~PDi---~t~gK~lg-gG~  320 (474)
T PLN02482        247 IAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAY-GGAQEYFGITPDL---TTLGKVIG-GGL  320 (474)
T ss_pred             eEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCc-chHhHHhCCCCCE---EEecchhh-CCC
Confidence            444454444666776554 677999999999999999999999876 3332 2222223323333   38899976 689


Q ss_pred             eeeEEEeeCCCCccchhhHHHHHhh---h-hccccCCCchhHHHHHhhhh
Q 021547          264 RFGWLATNDPNGVLQKSGIVGSIKA---C-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       264 r~G~i~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++|.+++..        ++++.+..   . ...+++.++++.+++.+.|+
T Consensus       321 Pigav~g~~--------ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~  362 (474)
T PLN02482        321 PVGAYGGRR--------EIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK  362 (474)
T ss_pred             ceEEEEEcH--------HHHHhhccCCCcccccCcchhHHHHHHHHHHHH
Confidence            999997742        46776642   1 23355678888777766553

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.44  E-value=5.6e-12  Score=105.85  Aligned_cols=204  Identities=16%  Similarity=0.155  Sum_probs=154.0

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC---------CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEE
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS---------MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIY  114 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~---------~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~  114 (311)
                      .++.||.+-=.-    +--.+++.++++.+.-+.-         .+.... .+-+..+.+.+++|+        ..|.+-
T Consensus        14 ~r~~iNv~PiQr----GGiLt~eArkal~E~gDGYSvCD~C~~Grldei~-kPpI~~F~~dlaeFl--------g~D~~R   80 (382)
T COG1103          14 TRGFINVNPIQR----GGILTEEARKALLEWGDGYSVCDFCLEGRLDEIT-KPPIKDFLEDLAEFL--------GMDEVR   80 (382)
T ss_pred             hcCccccChhhc----cCcCCHHHHHHHHHhcCCcchhhhhccCcccccc-CCcHHHHHHHHHHHh--------CCceee
Confidence            456677663211    1234678888887765421         111111 123556777788888        567899


Q ss_pred             EeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC----C---CccE
Q 021547          115 ITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD----E---NTAA  187 (311)
Q Consensus       115 ~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~---~~~~  187 (311)
                      +|+|+.++-++++.+++++| |.|++...+|.....++++.|+++..+|-.....+.+++|...+.+.    +   .+.+
T Consensus        81 ~t~GARe~KfavMhal~~~g-d~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~l  159 (382)
T COG1103          81 VTAGAREAKFAVMHALCKEG-DWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPAL  159 (382)
T ss_pred             ecccchhhHHHHHHHhccCC-CEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceE
Confidence            99999999999999999999 99999999998888999999999999996666778899887766553    2   3666


Q ss_pred             EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeE
Q 021547          188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW  267 (311)
Q Consensus       188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~  267 (311)
                      .+++++....|...+   -++++++|+++++.++...+|..    |.-+.+......   .++++|-+|++ ++.-+||.
T Consensus       160 allTh~Dg~YGNl~D---akkva~ic~e~gvPlllN~AYt~----Grmpvs~ke~g~---DFiVgSGHKsm-AAs~PiGv  228 (382)
T COG1103         160 ALLTHVDGEYGNLAD---AKKVAKICREYGVPLLLNCAYTV----GRMPVSGKEIGA---DFIVGSGHKSM-AASAPIGV  228 (382)
T ss_pred             EEEeccCCCcCCchh---hHHHHHHHHHcCCceEeecceee----ccccccccccCC---CEEEecCccch-hccCCeeE
Confidence            788899888888766   99999999999999999999986    333344443333   39999999997 45568999


Q ss_pred             EEeeC
Q 021547          268 LATND  272 (311)
Q Consensus       268 i~~~~  272 (311)
                      +....
T Consensus       229 l~~~e  233 (382)
T COG1103         229 LAMSE  233 (382)
T ss_pred             Eeehh
Confidence            87754

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.44  E-value=1.8e-11  Score=111.97  Aligned_cols=187  Identities=22%  Similarity=0.149  Sum_probs=127.1

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-----CCCEEEeCChHHHHHHHHHHHhc--------CC-----CCEEEec
Q 021547           80 FNCYAPMFGLPLARRAVAEYLNRDLPYKLS-----ADDIYITLGCMEAVEIILTVITR--------LG-----AANILLP  141 (311)
Q Consensus        80 ~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-----~~~v~~t~g~~~a~~~~~~~l~~--------~g-----~d~Vl~~  141 (311)
                      ...|...+...++++.+.+|+.+.+|++..     ...-++|+|+|+++..++.+..+        .|     .-.|+++
T Consensus        68 ~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s  147 (373)
T PF00282_consen   68 GFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVS  147 (373)
T ss_dssp             TTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEE
T ss_pred             ccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccc
Confidence            335666667889999999999999988722     23568899999998877655421        12     1257777


Q ss_pred             CCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---C--cc-EEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547          142 RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---N--TA-AIVIINPCNPCGNVLTYQHLQKIAETARK  215 (311)
Q Consensus       142 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~--~~-~i~i~~p~nptG~~~~~~~l~~l~~l~~~  215 (311)
                      .-.|......+..+|+.++.++.++  ++.+|.++|++.+.+   +  +. +|+.+..+..+|.+-+   +++|.++|++
T Consensus       148 ~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~---l~~i~~i~~~  222 (373)
T PF00282_consen  148 EQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP---LEEIADICEK  222 (373)
T ss_dssp             TTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S---HHHHHHHHHH
T ss_pred             cccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccccC---HHHHhhhccc
Confidence            8799999999999999999998764  678999999987653   2  34 3444556789999977   9999999999


Q ss_pred             hCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547          216 LGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN  274 (311)
Q Consensus       216 ~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~  274 (311)
                      +|+|+++|.+|++..+--..... +..+ +.-.-|. .+++|.++ .-..+|++++.++.
T Consensus       223 ~~~wlHVDaA~gg~~~~~~~~~~~~~gi-~~adSit-~d~HK~l~-~P~~~~~~l~r~~~  279 (373)
T PF00282_consen  223 YNIWLHVDAAYGGSALLSPEYRHLLFGI-ERADSIT-IDPHKWLG-VPYGCGVLLVRDKS  279 (373)
T ss_dssp             CT-EEEEEETTGGGGGGHCTTGGGGTTG-GGESEEE-EETTTTTS--SSS-EEEEESSGG
T ss_pred             cceeeeeccccccccccccccccccccc-ccccccc-cchhhhhc-CCccceeEEeeccc
Confidence            99999999999983221111111 1111 1111233 39999965 45789999997754

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.43  E-value=2.6e-11  Score=114.92  Aligned_cols=252  Identities=15%  Similarity=0.064  Sum_probs=150.8

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPM-FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      .+++.+|||..|--....+ -.+|.+.+++.+++.....  +... .+..+....+++.+.+.+. +...+.++++++|+
T Consensus        86 ~dG~~ylD~~sg~~~~~lG-h~hp~v~~Av~~ql~~~~~--~~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGs  161 (504)
T PLN02760         86 INGKKYLDALAGLWCTALG-GSEPRLVAAATEQLNKLPF--YHSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGS  161 (504)
T ss_pred             CCCCEEEEcCcCHHhcccC-CCCHHHHHHHHHHHhhccc--eecccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChH
Confidence            3589999998863111222 4679999999999874321  1110 1223445556666554322 11235799999999


Q ss_pred             HHHHHHHHHHh-------cCCCCEEEecCCCCcchHH-HHHHcCcE------------EEEeeccCCCC----c------
Q 021547          121 EAVEIILTVIT-------RLGAANILLPRPGWPFYES-FAKRNHIE------------VRHFDLLPERG----W------  170 (311)
Q Consensus       121 ~a~~~~~~~l~-------~~g~d~Vl~~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~----~------  170 (311)
                      +|++.+++...       .+++.+|+.....|.+... .+...|..            +..++......    .      
T Consensus       162 EA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  241 (504)
T PLN02760        162 EANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEF  241 (504)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHH
Confidence            99999998774       1343678888877776532 22222221            11111100000    0      


Q ss_pred             -ccCHHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547          171 -EVDLEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS  244 (311)
Q Consensus       171 -~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~  244 (311)
                       ....+++++.+.    ++..++++.......|.. .+++.+++|.++|++||+++|+||++.++...|..+ ....++-
T Consensus       242 ~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~-a~e~~gv  320 (504)
T PLN02760        242 STRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMF-GCDKYNI  320 (504)
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhh-HHHhcCC
Confidence             001234666552    234445554445666765 467779999999999999999999997775445422 2233333


Q ss_pred             CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547          245 IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       245 ~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .++   |.+++|.++...+++|.++++.        ++++.+..        ....+++.+|++.+++.+.|+
T Consensus       321 ~PD---ivtlgK~lggG~~PigAv~~~~--------~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le  382 (504)
T PLN02760        321 KPD---LVSLAKALSSAYMPIGAVLVSP--------EISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALK  382 (504)
T ss_pred             CCc---EEEecccccCCccccceEeecH--------HHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHH
Confidence            333   3488999754225899988753        36666643        134467788998888887764

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=99.42  E-value=2.6e-13  Score=118.10  Aligned_cols=191  Identities=16%  Similarity=0.147  Sum_probs=119.8

Q ss_pred             cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC--C---CCEEEecCCCCcchHHHHHHcCcEEEEee
Q 021547           89 LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL--G---AANILLPRPGWPFYESFAKRNHIEVRHFD  163 (311)
Q Consensus        89 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~--g---~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~  163 (311)
                      .++|.+.|.++....-+..++...|++++|+|+.+++++.+|...  .   .-+|+...|.|+.|......+.-....+.
T Consensus        45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~  124 (363)
T PF04864_consen   45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA  124 (363)
T ss_dssp             -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred             cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence            478888888888776676777789999999999999999999643  1   14899999999999877655443333332


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      -        |...+...-+..+-.-++++||||.|.+     .+.++   +..+..+|.|-+|.+-.|+.     +....
T Consensus       125 G--------da~~~~~~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTp-----I~~~a  183 (363)
T PF04864_consen  125 G--------DASNFKNSDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTP-----ITAPA  183 (363)
T ss_dssp             E--------ECCCGTT-S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS--------S-B
T ss_pred             c--------cHHhhccCCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeecccccc-----cCCCC
Confidence            2        1111111111234445999999999996     33333   45567789999999855542     22211


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      +  ..|-++++||.-|-+|.|+||.++.|+       ++.+++..+.. .+.++|.=+|.-++++|+
T Consensus       184 D--~DiMLFT~SK~TGHAGSR~GWAlVKD~-------~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk  241 (363)
T PF04864_consen  184 D--HDIMLFTLSKLTGHAGSRFGWALVKDE-------EVAKKMTKYMELNTIGVSRDSQLRALKILK  241 (363)
T ss_dssp             ----SEEEEEHHHHCS-GGG-EEEEEES-H-------HHHHHHHHHHHHHCSS--HHHHHHHHHHHH
T ss_pred             C--CceEEEEEecccCccccccceeeecCH-------HHHHHHHHHHHHhcccCcHHHHHHHHHHHH
Confidence            1  228899999999999999999999875       48888888854 468999999999999986

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.42  E-value=4.2e-12  Score=122.74  Aligned_cols=174  Identities=11%  Similarity=0.089  Sum_probs=125.7

Q ss_pred             CCCCCCCCCc-HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH-HHHcCc
Q 021547           80 FNCYAPMFGL-PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF-AKRNHI  157 (311)
Q Consensus        80 ~~~Y~~~~g~-~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~-~~~~g~  157 (311)
                      +.+...+.|. .+..+..|+.++       .....++++|+|.++.+++.+++.+| |.||+++.+|.+..+. +.+.|+
T Consensus       166 LddL~~~eG~i~eAq~~AA~~fg-------Ad~tyFlvNGTS~gn~a~i~a~~~~G-d~VLvdRN~HKSv~hgaLiLsGa  237 (720)
T PRK13578        166 LGDLLIHEGAAKDAQKHAAKVFN-------ADKTYFVLNGTSASNKVVTNALLTPG-DLVLFDRNNHKSNHHGALIQAGA  237 (720)
T ss_pred             CCCCCCCChHHHHHHHHHHHHhC-------CCceEEEeCChhHHHHHHHHHhcCCC-CEEEeecccHHHHHHHHHHHcCC
Confidence            3344444554 466666666663       23467889999999999999999999 9999999999998885 899999


Q ss_pred             EEEEeeccCCCCc----ccCH-----HHHHhhcCCC----------ccEEEEeCCCCCCccCCCHHHHHHHHHH-HHHhC
Q 021547          158 EVRHFDLLPERGW----EVDL-----EAVEALADEN----------TAAIVIINPCNPCGNVLTYQHLQKIAET-ARKLG  217 (311)
Q Consensus       158 ~~~~~~~~~~~~~----~~d~-----~~l~~~l~~~----------~~~i~i~~p~nptG~~~~~~~l~~l~~l-~~~~~  217 (311)
                      .++++.... +.+    .++.     +.+++.+.++          .+++++++|++ .|.+++   ++.|+++ ++.++
T Consensus       238 ~PVYl~P~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~  312 (720)
T PRK13578        238 TPVYLETAR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD  312 (720)
T ss_pred             eEEEeeccc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC
Confidence            999987654 223    3454     4477766543          47889999875 788888   8888888 67778


Q ss_pred             CEEEEeccccCC-ccCC----CCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          218 ILVIADEVYGHL-AFGS----TPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       218 ~~li~D~ay~~~-~~~~----~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                       .|++||||+.. .|..    .+...+..-.++.-++++.|.+|.  ++++.-+.++
T Consensus       313 -~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKt--L~alTQaS~L  366 (720)
T PRK13578        313 -YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQ--QAGFSQTSQI  366 (720)
T ss_pred             -cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhc--chhhhhHhhh
Confidence             99999999864 4432    111112211223457999999998  5677666655

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.42  E-value=2e-12  Score=109.65  Aligned_cols=207  Identities=15%  Similarity=0.155  Sum_probs=147.7

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--C------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF--N------CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI  115 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~--~------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~  115 (311)
                      ..++++|+.++   |.++..+|++.++-+.+++.-..  .      +|..  -...|++.+|++.        ..++.++
T Consensus        66 ~k~ilnFcaNn---YLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~--iHk~LE~kiAqfh--------~rED~il  132 (417)
T KOG1359|consen   66 DKKILNFCANN---YLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQD--IHKLLESKIAQFH--------GREDTIL  132 (417)
T ss_pred             ccceeeecccc---cccccCChHHHHHHHHHHHHhCCCccceeEEecchH--HHHHHHHHHHHHh--------CCCceEE
Confidence            57899999998   56788999999999988873211  0      1221  3456788888888        4467888


Q ss_pred             eCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEe
Q 021547          116 TLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVII  191 (311)
Q Consensus       116 t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~  191 (311)
                      .+++-.|...++.+++.|. |.|+-..-.|.+..+.++... +..          ..|+-+++..+.    .+-++++.-
T Consensus       133 ypscfdANag~feail~pe-dAvfSDeLNhASIIdGirLck-ry~----------h~dv~~l~~~l~~a~k~r~klv~TD  200 (417)
T KOG1359|consen  133 YPSCFDANAGAFEAILTPE-DAVFSDELNHASIIDGIRLCK-RYR----------HVDVFDLEHCLISACKMRLKLVVTD  200 (417)
T ss_pred             eccccccchHHHHHhcChh-hhhhccccccchhhhhhHHHh-hhc----------cchhHHHHHHHHHhhhheEEEEEec
Confidence            9999999999999999999 999999888888766555443 111          135555555433    234444433


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC-CeEEEecCcccCC-CCcceeeEEE
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV-PVITLGSISKRWI-VPGWRFGWLA  269 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~-~~i~i~s~sK~~~-~~G~r~G~i~  269 (311)
                      ..-...|.+.|   +++|.+++++||.++++||+|+...++.....+-..+...+ ..|..++++|++| +.|   ||+.
T Consensus       201 g~FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G---Gytt  274 (417)
T KOG1359|consen  201 GVFSMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG---GYTT  274 (417)
T ss_pred             ceeccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC---CCcc
Confidence            44578899988   99999999999999999999998777533333333333222 3588899999987 566   9998


Q ss_pred             eeCCCCccchhhHHHHHhhh
Q 021547          270 TNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~  289 (311)
                      +|.+        +++.+++.
T Consensus       275 gp~~--------li~llrqr  286 (417)
T KOG1359|consen  275 GPKP--------LISLLRQR  286 (417)
T ss_pred             CChh--------HHHHHHhc
Confidence            8754        66666655

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.42  E-value=9.9e-12  Score=109.48  Aligned_cols=213  Identities=16%  Similarity=0.171  Sum_probs=153.8

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC-----CCCCC-CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-----MFNCY-APMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG  118 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~-----~~~~Y-~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g  118 (311)
                      .++--.+.++   |.+..-+|.+.++|.+.++.-     ...+. +.+.-..+|++.+|++..        ++.-++.++
T Consensus       171 k~VtVWCSND---YLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHq--------K~aALlFsS  239 (570)
T KOG1360|consen  171 KKVTVWCSND---YLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQ--------KEAALLFSS  239 (570)
T ss_pred             CceEEEecCc---cccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhc--------Ccceeeeee
Confidence            4444455555   456788999999999988631     11122 233445688999999984        455566666


Q ss_pred             hHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC----CccEEEEeC
Q 021547          119 CMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----NTAAIVIIN  192 (311)
Q Consensus       119 ~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~i~i~~  192 (311)
                      .--|.+..+.+|.+  || -.|+-....|.+....++..+..-..+..    +   |++.|+++++.    .+|+|.+.+
T Consensus       240 CfVANDstLftLak~lpg-cei~SD~gNHASMI~GIrns~v~K~IFrH----N---D~~hL~~lL~~~~~svPKivAFEt  311 (570)
T KOG1360|consen  240 CFVANDSTLFTLAKKLPG-CEIFSDEGNHASMIQGIRNSRVPKHIFRH----N---DLDHLEQLLQSSPKSVPKIVAFET  311 (570)
T ss_pred             eeeccchHHHHHHHHCCC-cEEeccccchHHHHHHhhhcCCcceeecc----C---CHHHHHHHHHhCCCCCCceEEEee
Confidence            66677777777754  78 88888888998888888888876554443    2   78888887753    588889999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEee
Q 021547          193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      .+..+|.+.|   +++|++++++||.+-++||+|+--.|+...-..-..-.- ..-.|+.+++.|+||+-|   |||.+.
T Consensus       312 VhSM~Gavcp---leelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat  385 (570)
T KOG1360|consen  312 VHSMDGAVCP---LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAAT  385 (570)
T ss_pred             eeccCCCcCC---HHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhh
Confidence            9999999999   999999999999999999999976665322111110000 001388999999999999   998875


Q ss_pred             CCCCccchhhHHHHHhhhh
Q 021547          272 DPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~  290 (311)
                      .        ++++.++.+.
T Consensus       386 ~--------~LvDmiRSyA  396 (570)
T KOG1360|consen  386 R--------KLVDMIRSYA  396 (570)
T ss_pred             h--------hHHHHHHHhc
Confidence            4        4888888873

>PRK07482 hypothetical protein; Provisional

Probab=99.42  E-value=3.3e-11  Score=113.34  Aligned_cols=251  Identities=14%  Similarity=0.085  Sum_probs=154.9

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      ..+++.+|||..|.-.... --.+|.+.+++.+++..... ..+.  ....+.+..+++.+.+..+  -..+.++++++|
T Consensus        46 D~dG~~ylD~~sg~~~~~l-Gh~~p~v~~Av~~q~~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sG  120 (461)
T PRK07482         46 DAQGRRYIDAFAGLYCVNV-GYGRTEVAEAIAEQAKELAYYHTYV--GHGTEASITLSKRIIDRAP--AGMSKVYYGLSG  120 (461)
T ss_pred             ECCCCEEEEcccchhhhcC-CCCCHHHHHHHHHHHHhcCcccccc--ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCch
Confidence            3458999999887322211 23578999999999875321 1110  1123455556666655332  124689999999


Q ss_pred             HHHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cC------------cEEEEeeccCCCCc---c-----
Q 021547          120 MEAVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NH------------IEVRHFDLLPERGW---E-----  171 (311)
Q Consensus       120 ~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g------------~~~~~~~~~~~~~~---~-----  171 (311)
                      ++|++.+++....       +++.+|+.....|.+....+.. .+            ..+..++.......   .     
T Consensus       121 SEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  200 (461)
T PRK07482        121 SDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQ  200 (461)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHH
Confidence            9999998887741       2346899888888774322211 11            01111211110000   0     


Q ss_pred             ---cCHHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          172 ---VDLEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       172 ---~d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                         -+++.+++.+.    +++.++++.......|.. .+++-+++|.++|++||+++|.||++.++...|..+ ....++
T Consensus       201 ~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~~~~g  279 (461)
T PRK07482        201 FSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMF-GSDHYG  279 (461)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchh-hHHhcC
Confidence               13466677663    234455555546666776 467789999999999999999999999885555432 233444


Q ss_pred             CCCCeEEEecCcccCCCCcc-eeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547          244 SIVPVITLGSISKRWIVPGW-RFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      -.++++   +++|.++ .|. ++|.+++.+        ++.+.+..        ..+.+++.++++.+++.+.|+
T Consensus       280 v~PDiv---~~gKgl~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~  342 (461)
T PRK07482        280 IEPDLI---TVAKGLT-SAYAPLSGSIVGE--------KVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLD  342 (461)
T ss_pred             CCCCEE---EEccccc-cCccccceeeecH--------HHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHH
Confidence            455556   5799964 464 899988753        35555542        133467889999988888764

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.41  E-value=6.6e-11  Score=111.35  Aligned_cols=221  Identities=12%  Similarity=0.011  Sum_probs=131.2

Q ss_pred             hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCC-CCCCCCcHHHHHHHH
Q 021547           24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----FNC-YAPMFGLPLARRAVA   97 (311)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----~~~-Y~~~~g~~~lr~~ia   97 (311)
                      ...+|++++..-.++     ....|+|=-..      -..++.+++++...+..-.     ..+ |.....+.++++...
T Consensus        18 ~d~~~~~~i~~e~~~-----q~~~l~liase------n~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~   86 (475)
T PLN03226         18 VDPEIADIIEKEKRR-----QWKGLELIASE------NFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQ   86 (475)
T ss_pred             cCHHHHHHHHHHHHH-----HHcCeeEecCC------ccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHH
Confidence            456777777643332     35667765554      2457889999888873211     112 333334455554333


Q ss_pred             HHHhhcCCCCCCCCCEEE---eCChHHHHHHHHHHHhcCCCCEEEecC---CCCcchHHH---HHHcCcE--EE--Eeec
Q 021547           98 EYLNRDLPYKLSADDIYI---TLGCMEAVEIILTVITRLGAANILLPR---PGWPFYESF---AKRNHIE--VR--HFDL  164 (311)
Q Consensus        98 ~~l~~~~g~~~~~~~v~~---t~g~~~a~~~~~~~l~~~g~d~Vl~~~---p~~~~~~~~---~~~~g~~--~~--~~~~  164 (311)
                      +...+.++  ...+.+.+   .++|+.|+..++.+|+++| |+|+..+   .+|......   .+..+..  +.  .+..
T Consensus        87 ~~~~~~f~--~~~~~~~~nv~~~SG~~AN~av~~aL~~pg-D~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~  163 (475)
T PLN03226         87 KRALEAFR--LDPEKWGVNVQPLSGSPANFAVYTALLQPH-DRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRL  163 (475)
T ss_pred             HHHHHHhC--CCcceeEEecCcCchHHHHHHHHHHhCCCC-CEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeee
Confidence            33333333  22333333   3677889999999999999 9999844   233321111   1111221  11  3333


Q ss_pred             cCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC-CCCCCccccc
Q 021547          165 LPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG-STPYIPMGVF  242 (311)
Q Consensus       165 ~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~-~~~~~~~~~~  242 (311)
                      + .+++.+|+++|++.+.. ++++|++ ..++ +|...+   +++|.++|+++|.++++|++|..-... +....++.  
T Consensus       164 ~-~~~g~iD~d~Le~~l~~~~pklIv~-~~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~--  235 (475)
T PLN03226        164 D-ESTGLIDYDKLEKKAMLFRPKLIIA-GASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE--  235 (475)
T ss_pred             c-CCCCCcCHHHHHHHHhhcCCeEEEE-ecCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC--
Confidence            2 24567999999998764 6665544 3333 667777   889999999999999999999863332 21112222  


Q ss_pred             CCCCCeEEEecCcccC-CCCcceeeEEEeeC
Q 021547          243 GSIVPVITLGSISKRW-IVPGWRFGWLATND  272 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~  272 (311)
                         ...++++|++|++ |..|   |+|+++.
T Consensus       236 ---~~Div~~t~hK~L~GP~G---g~I~~~~  260 (475)
T PLN03226        236 ---YCDVVTTTTHKSLRGPRG---GMIFFRK  260 (475)
T ss_pred             ---CCeEEEecCcccccCCCc---eEEEEch
Confidence               1338899999997 3344   8877643

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.41  E-value=3.6e-11  Score=114.04  Aligned_cols=184  Identities=18%  Similarity=0.123  Sum_probs=130.4

Q ss_pred             CCCCCCCCcHHHHHHHHHHHhhcCCC-C---------C-CCCCEEEeCChHHHHHHHHHHHhc-----------------
Q 021547           81 NCYAPMFGLPLARRAVAEYLNRDLPY-K---------L-SADDIYITLGCMEAVEIILTVITR-----------------  132 (311)
Q Consensus        81 ~~Y~~~~g~~~lr~~ia~~l~~~~g~-~---------~-~~~~v~~t~g~~~a~~~~~~~l~~-----------------  132 (311)
                      ..|..++...++++.+.+|+.+..+. +         . ....-++|+|||.|+..++.+-..                 
T Consensus       119 ~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl  198 (522)
T TIGR03799       119 VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGL  198 (522)
T ss_pred             ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccc
Confidence            35666778899999999999876531 1         1 112357789999988776655421                 


Q ss_pred             ---------CCCCEEEecCCCCcchHHHHHHcCc---EEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEe--CCC
Q 021547          133 ---------LGAANILLPRPGWPFYESFAKRNHI---EVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVII--NPC  194 (311)
Q Consensus       133 ---------~g~d~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~--~p~  194 (311)
                               ++ ..|+++.-.|......++..|+   +++.++.+  +++.+|++.|++.++    ++++.++++  ..+
T Consensus       199 ~~~~~~~~~~~-~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d--~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGt  275 (522)
T TIGR03799       199 FAALKHYGYDG-LAILVSERGHYSLGKAADVLGIGRDNLIAIKTD--ANNRIDVDALRDKCAELAEQNIKPLAIVGVAGT  275 (522)
T ss_pred             hhhhhhccCCc-eEEEECCCchHHHHHHHHHcCCCcccEEEEEeC--CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecC
Confidence                     12 4688999999999999999998   68888874  457899999999875    355555554  446


Q ss_pred             CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCC-cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI-PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      +.||.+.|   +++|+++|+++|+|+++|.+|+....-...+. .+..+  ..-..+..|.+|+++.| ..+|.+++.++
T Consensus       276 t~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gl--e~aDSit~d~HK~l~~P-~g~G~llvr~~  349 (522)
T TIGR03799       276 TETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGI--ERADSVTIDAHKQLYVP-MGAGMVLFKDP  349 (522)
T ss_pred             cCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCc--hhCCEEEEChhhcCCcC-cccEEEEEeCH
Confidence            79999999   99999999999999999999996432110000 01111  11236777999975444 66899888764

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>PLN02271 serine hydroxymethyltransferase

Probab=99.40  E-value=1.2e-10  Score=109.10  Aligned_cols=222  Identities=13%  Similarity=0.019  Sum_probs=145.4

Q ss_pred             hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHH
Q 021547           25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF------NCYAPMFGLPLARRAVAE   98 (311)
Q Consensus        25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~   98 (311)
                      ...|.+++..-.+     +...-|+|=-..      -..++.+++++...+.+-..      ..|.....+.+++..-.+
T Consensus       133 Dpei~~li~~E~~-----rQ~~~l~LIASE------N~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~e  201 (586)
T PLN02271        133 DPDIHELMEKEKQ-----RQFKGIELIASE------NFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCE  201 (586)
T ss_pred             CHHHHHHHHHHHH-----HHhcCeeecccc------ccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHH
Confidence            4566666653222     235556665443      23567888887766542111      123344455667666666


Q ss_pred             HHhhcCCCCCCC--CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH---------HHHcCcEEEEeeccC-
Q 021547           99 YLNRDLPYKLSA--DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF---------AKRNHIEVRHFDLLP-  166 (311)
Q Consensus        99 ~l~~~~g~~~~~--~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~---------~~~~g~~~~~~~~~~-  166 (311)
                      ..++.||.+...  -||..- +++.|+.+++.+|++|| |+|+..+..|.+....         +...|..+..+++.. 
T Consensus       202 ra~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~ALl~PG-D~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d  279 (586)
T PLN02271        202 RALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGLLLPG-DRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVN  279 (586)
T ss_pred             HHHHHhCCcccccccceeec-cHHHHHHHHHHHhcCCC-CEEEEecCCCCCchhcccccccccccccccceEEEEEcccc
Confidence            666666643211  356666 55779999999999999 9999987777654332         234555555554322 


Q ss_pred             CCCcccCHHHHHh-hcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC-CccCCCCCCcccccCC
Q 021547          167 ERGWEVDLEAVEA-LADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGS  244 (311)
Q Consensus       167 ~~~~~~d~~~l~~-~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~  244 (311)
                      ..++.+|.+++++ +...++++|++....+|  ..++   ++++.++|+++|+++++|.+|.. +.-.+..+.++..   
T Consensus       280 ~~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~---  351 (586)
T PLN02271        280 PQTGYIDYDKLEEKALDFRPKILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDY---  351 (586)
T ss_pred             cccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcC---
Confidence            3456799999998 66779999888777788  5566   88999999999999999999985 3323322233322   


Q ss_pred             CCCeEEEecCcccCCCCcceeeEEEee
Q 021547          245 IVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       245 ~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                        ..|+.+|.+|++  .|-|-|.|++.
T Consensus       352 --aDvvt~TTHKtL--rGPrGG~I~~r  374 (586)
T PLN02271        352 --CDIVTSTTHKSL--RGPRGGIIFYR  374 (586)
T ss_pred             --CcEEEeCCcccC--CCCCceEEEec
Confidence              238999999985  56666888874

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=99.39  E-value=3.7e-12  Score=101.27  Aligned_cols=128  Identities=22%  Similarity=0.318  Sum_probs=92.2

Q ss_pred             chHHhhHHHHhhhhhHHHHHHHHHhh-hcc-CCCCCeeecCCCCCCC-------------CCCCCCcHHHHHHHHHHHhc
Q 021547           13 VKQELNREREAEVAAFRYAIVSLMES-VDK-NDPRPVIPLGHGDPAA-------------FPCFRTAAVAEDAIVDSVRS   77 (311)
Q Consensus        13 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~-~~~~~~i~~~~g~p~~-------------~~~~~~~~~~~~a~~~~~~~   77 (311)
                      +|+++.-....+.+..+...+...+. +.+ ..+.++|+|+.++..+             .+.+.+++.+.+++.+.   
T Consensus         9 ~s~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~---   85 (153)
T PLN02994          9 LSKLALADKHGEASPYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI---   85 (153)
T ss_pred             hhhhcccccCCCCchHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH---
Confidence            44444443344555666555554432 322 3577899999875310             02244444545555443   


Q ss_pred             CCCCCCCCCCCcHHHHHHHHHHHhhcCC--CCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcc
Q 021547           78 SMFNCYAPMFGLPLARRAVAEYLNRDLP--YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPF  147 (311)
Q Consensus        78 ~~~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~  147 (311)
                         ..|.+..|.++||+++++|+++.+|  +.+++++|++|+|++++++.++.+|+++| |.|++++|+|+.
T Consensus        86 ---a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpG-D~VlVp~P~Y~~  153 (153)
T PLN02994         86 ---ALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPG-DAFLVPTPYYAA  153 (153)
T ss_pred             ---hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCC-CEEEEeCCCCCC
Confidence               2588889999999999999999888  67889999999999999999999999999 999999999963

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.39  E-value=2.7e-11  Score=113.62  Aligned_cols=248  Identities=15%  Similarity=0.082  Sum_probs=150.6

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      .+++.++||..|.-.. ..--.+|.+.+++.+++..... ..|.    ..+.+..+++.+.+..+.  ..+.++++++|+
T Consensus        79 ~dG~~ylD~~~g~~~~-~lGH~~p~v~~Ai~~ql~~l~~~~~~~----~~~~~~~lae~L~~~~p~--~~~~v~f~~SGs  151 (459)
T PRK11522         79 TQGQEFIDCLGGFGIF-NVGHRNPVVVSAVQNQLAKQPLHSQEL----LDPLRAMLAKTLAALTPG--KLKYSFFCNSGT  151 (459)
T ss_pred             CCCCEEEECCcCHHhh-hcCCCCHHHHHHHHHHHhhCccccccc----CCHHHHHHHHHHHHhCCC--CCCEEEEeCCch
Confidence            3578888887762111 1123678999999999874321 1122    234455566666543321  236899999999


Q ss_pred             HHHHHHHHHHhc----CCCCEEEecCCCCcchHHHHHH-cCcEEEE---eeccCCCC--cccCHHHHHhhcC------CC
Q 021547          121 EAVEIILTVITR----LGAANILLPRPGWPFYESFAKR-NHIEVRH---FDLLPERG--WEVDLEAVEALAD------EN  184 (311)
Q Consensus       121 ~a~~~~~~~l~~----~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~~---~~~~~~~~--~~~d~~~l~~~l~------~~  184 (311)
                      +|++.+++....    +|+.+|+.....|.+....+.. .+.....   .+..+.-.  ...|.+.+++.+.      .+
T Consensus       152 EAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~  231 (459)
T PRK11522        152 ESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDD  231 (459)
T ss_pred             HHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCc
Confidence            999998887642    2335788888888875433322 2211110   11110000  0125677777664      23


Q ss_pred             ccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-
Q 021547          185 TAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG-  262 (311)
Q Consensus       185 ~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-  262 (311)
                      +.++++.......|... |++.++++.++|++||+++|+||++.++...|. ......++-.++++   +++|.++ .| 
T Consensus       232 iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~-~~a~e~~gv~PDiv---t~gK~lg-gG~  306 (459)
T PRK11522        232 VAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGK-MFACEHENVQPDIL---CLAKALG-GGV  306 (459)
T ss_pred             EEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccch-hhhhhccCCCCCEE---Eechhhh-CCC
Confidence            44555555566677754 666799999999999999999999987644443 22233333333444   8899965 46 


Q ss_pred             ceeeEEEeeCCCCccchhhHHHHHhh--h-hccccCCCchhHHHHHhhhh
Q 021547          263 WRFGWLATNDPNGVLQKSGIVGSIKA--C-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       263 ~r~G~i~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +++|.+++..        ++++.+..  + .+.+++.+|++.+++.+.|+
T Consensus       307 ~Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~  348 (459)
T PRK11522        307 MPIGATIATE--------EVFSVLFDNPFLHTTTFGGNPLACAAALATIN  348 (459)
T ss_pred             ccceeEEEcH--------HHHHHhccCCcccCCCCCCCHHHHHHHHHHHH
Confidence            6899999853        35555532  1 33456678888888776654

>PRK05965 hypothetical protein; Provisional

Probab=99.39  E-value=8.3e-11  Score=110.59  Aligned_cols=251  Identities=17%  Similarity=0.141  Sum_probs=153.9

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      ..+++.+|||..|--... .--.+|.+.+++.+++..... ..+.  ....+.+..+++.+.+..+  -..+.++++++|
T Consensus        42 D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sG  116 (459)
T PRK05965         42 DASGHQLLDAFAGLWCVN-VGYGQESIVEAAAEQMRELPYATGYF--HFGSEPAIRLAAKLAERAP--GSLNHVYFTLGG  116 (459)
T ss_pred             ECCCCEEEECcccHHhcc-CCCCCHHHHHHHHHHHHhcCCccccc--ccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCh
Confidence            346899999987621111 123578999999999874321 1110  0112334456666654332  134689999999


Q ss_pred             HHHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHH-HHcCc------------EEEEeeccCCC--CcccC----
Q 021547          120 MEAVEIILTVITR-------LGAANILLPRPGWPFYESFA-KRNHI------------EVRHFDLLPER--GWEVD----  173 (311)
Q Consensus       120 ~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~-~~~g~------------~~~~~~~~~~~--~~~~d----  173 (311)
                      ++|++.+++....       +++.+|+....+|.+....+ ...+.            ....++.....  .+.-+    
T Consensus       117 SEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (459)
T PRK05965        117 SDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAI  196 (459)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHH
Confidence            9999998887542       33468998888887653221 11111            01122211000  00112    


Q ss_pred             ----HHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547          174 ----LEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS  244 (311)
Q Consensus       174 ----~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~  244 (311)
                          ++.+++.+.    ++..++++...+...|.. .+++-++++.++|++||+++|.||+..++...|+ ......++-
T Consensus       197 ~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~-~~a~~~~gv  275 (459)
T PRK05965        197 IAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGP-LFACEAEGV  275 (459)
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCch-hhhHhhcCC
Confidence                245666553    244555655556666774 5777799999999999999999999998865554 233344444


Q ss_pred             CCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547          245 IVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       245 ~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .++++   .++|.++ .| +++|.+++.+        ++++.+..        ..+.+++.+|++.+++.+.|+
T Consensus       276 ~PDiv---~~gKgl~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~  337 (459)
T PRK05965        276 VPDLM---TVAKGLT-SGYVPMGAVLMSD--------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLR  337 (459)
T ss_pred             CCCeE---Eechhhc-cCCcceeEEEEcH--------HHHHHHhccccccccccccCCCCCCHHHHHHHHHHHH
Confidence            55556   6799964 57 5999999853        46666542        133467889999888877664

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.39  E-value=8.6e-12  Score=113.76  Aligned_cols=185  Identities=11%  Similarity=-0.011  Sum_probs=121.7

Q ss_pred             CCCcHHHHHHHHHHHhcC---CCCCCCCC-------CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC-hHHHHHHHHHH
Q 021547           61 FRTAAVAEDAIVDSVRSS---MFNCYAPM-------FGLPLARRAVAEYLNRDLPYKLSADDIYITLG-CMEAVEIILTV  129 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~---~~~~Y~~~-------~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g-~~~a~~~~~~~  129 (311)
                      .+.|+.|+++|.+.+...   .-..|...       .-+.+.|+.++++++.     -.+++|++|+| +|+++++++..
T Consensus         8 ~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~-----~~~~~vvf~~gs~T~a~~~~~~~   82 (355)
T cd00611           8 AALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNI-----PDNYKVLFLQGGATGQFAAVPLN   82 (355)
T ss_pred             CCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCC-----CCCceEEEEcCCchHHHHHHHHh
Confidence            467899999999887321   00112221       2245677778777742     14568999988 99999999999


Q ss_pred             Hhc---CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccC-HHHHHhhcCCCccEEEEeCCCCCCccCCCHHH
Q 021547          130 ITR---LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVD-LEAVEALADENTAAIVIINPCNPCGNVLTYQH  205 (311)
Q Consensus       130 l~~---~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~  205 (311)
                      +..   +| |.|+. .+........++..|.+++.++.....++ .+ .+..+..+++++++|.+++..|.||..++   
T Consensus        83 l~~~~~~~-~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~---  156 (355)
T cd00611          83 LLGDKGTA-DYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKY-TKIPDVETWDLAPDAAYVHYCSNETIHGVEFD---  156 (355)
T ss_pred             cCCCCCeE-EEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCC-CCCCCHhhcCCCCCCCEEEEeCCcccccEEcc---
Confidence            987   44 55543 22222234477888999998886422122 13 33333445778999999999999999743   


Q ss_pred             HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          206 LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       206 l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                           ++++.+|+++++|.+.+.    |..+..+..++     +.+.|..|.+|.+|  +|.++++.
T Consensus       157 -----~i~~~~g~~~~VDa~qs~----g~~~idv~~~~-----~~~ss~~K~lGP~G--~g~l~~~~  207 (355)
T cd00611         157 -----EVPDTGGVPLVADMSSNI----LSRPIDVSKFG-----VIYAGAQKNLGPAG--VTVVIVRK  207 (355)
T ss_pred             -----eecccCCCeEEEEccccc----cCCCCCHHHhC-----EEEeecccccCCCc--eEEEEECH
Confidence                 344558999999999986    22333443332     46677899988666  66666654

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PRK07678 aminotransferase; Validated

Probab=99.38  E-value=7.2e-11  Score=110.81  Aligned_cols=250  Identities=14%  Similarity=0.017  Sum_probs=150.6

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.+|||..|--... .-..+|.+.+++.+++.......  .... .+....+++.+.+..+   ..+.++++++++
T Consensus        43 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~--~~~~-~~~~~~lae~l~~~~~---~~~~v~f~~sGs  115 (451)
T PRK07678         43 DIQGNRYLDGMSGLWCVN-VGYGRKELAEAAYEQLKTLSYFP--LTQS-HEPAIKLAEKLNEWLG---GEYVIFFSNSGS  115 (451)
T ss_pred             eCCCCEEEEccccHHhhc-CCCCCHHHHHHHHHHHHhcCccc--cccC-CHHHHHHHHHHHHhCC---CCCEEEEeCCcH
Confidence            345899999987621111 12357899999999887432211  1111 2233445555554333   124799999999


Q ss_pred             HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCC--cc-----cC
Q 021547          121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERG--WE-----VD  173 (311)
Q Consensus       121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~--~~-----~d  173 (311)
                      +|++.+++....       +|+.+|+.....|.+....+.. .+.            .+..++......  +.     .+
T Consensus       116 eA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (451)
T PRK07678        116 EANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYD  195 (451)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHH
Confidence            999988887642       2446888888888775433322 111            112222111000  00     01


Q ss_pred             ---HHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC
Q 021547          174 ---LEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI  245 (311)
Q Consensus       174 ---~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~  245 (311)
                         ++.+++.+.    +++.++++.......|.. .+++.++++.++|++||+++|.||++.++...|. ......++-.
T Consensus       196 ~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~-~~~~~~~gv~  274 (451)
T PRK07678        196 LECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGK-AFGFMNYGVK  274 (451)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCch-hHHHHhcCCC
Confidence               123455453    345555555545556665 4677799999999999999999999988755553 2222334434


Q ss_pred             CCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh-------hhccccCCCchhHHHHHhhhh
Q 021547          246 VPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       246 ~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++++   +++|.++...+++|.+++.+        ++++.+..       ....+++.++++.+++.+.|+
T Consensus       275 PDiv---t~gK~lggG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~  334 (451)
T PRK07678        275 PDII---TMAKGITSAYLPLSATAVKK--------EIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLE  334 (451)
T ss_pred             CCEE---EeecccccCCcceeEEEEcH--------HHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHH
Confidence            4445   77999765337999999854        46666643       134567889998888887764

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.38  E-value=3.5e-11  Score=120.46  Aligned_cols=208  Identities=15%  Similarity=0.143  Sum_probs=133.0

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc---CCCCCCCC----CCCcHHHHHHHHHHHhhcCCCCCCCC--CEEEe
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS---SMFNCYAP----MFGLPLARRAVAEYLNRDLPYKLSAD--DIYIT  116 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~---~~~~~Y~~----~~g~~~lr~~ia~~l~~~~g~~~~~~--~v~~t  116 (311)
                      .++.|+++.-.    .+.+..+.+++.+....   +....|..    ..-+.+.|+.++++++      ++++  .|++|
T Consensus        34 ~~iYLD~Aatt----~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lg------a~~~~~~VvFt  103 (805)
T PLN02724         34 GVVYLDHAGAT----LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFN------APPSDYACVFT  103 (805)
T ss_pred             CCEeEeCCCCC----CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhC------CCccceEEEEe
Confidence            37888888622    23345666666555432   11111111    1235678888888884      3444  58999


Q ss_pred             CChHHHHHHHHHHH-hcCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCC------CCcccCH--HHHHhhc---
Q 021547          117 LGCMEAVEIILTVI-TRLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPE------RGWEVDL--EAVEALA---  181 (311)
Q Consensus       117 ~g~~~a~~~~~~~l-~~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~------~~~~~d~--~~l~~~l---  181 (311)
                      +|+|+++++++.++ .++| |+|++..-.|.+..   ..++..|++++.+++...      ....++.  +.|++.+   
T Consensus       104 snaT~alnlva~~l~~~~g-d~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~  182 (805)
T PLN02724        104 SGATAALKLVGETFPWSSE-SHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSK  182 (805)
T ss_pred             CChHHHHHHHHHHCCCCCC-CeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhh
Confidence            99999999999988 5788 99999887787654   344567899998876521      1122332  5566543   


Q ss_pred             -------CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh-----CCEEEEeccccCCccCCCCCCcccccCCCCCeE
Q 021547          182 -------DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL-----GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVI  249 (311)
Q Consensus       182 -------~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~-----~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i  249 (311)
                             .++++++.+++.+|-||..+|.+.+..+.+.++.+     ++++++|.+++.    |+-+..+..++.   .+
T Consensus       183 l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~~~~---Df  255 (805)
T PLN02724        183 LQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSRYPA---DF  255 (805)
T ss_pred             hccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhhcCC---CE
Confidence                   24568999999999999999955433333322222     367999999986    333344444433   38


Q ss_pred             EEecCcccCCCCcceeeEEEeeC
Q 021547          250 TLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       250 ~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      ++.|++|++|.| ..+|++++..
T Consensus       256 l~~S~HK~~GgP-~G~G~L~vr~  277 (805)
T PLN02724        256 VVVSFYKIFGYP-TGLGALLVRR  277 (805)
T ss_pred             EEEecceeccCC-CCceEEEEeh
Confidence            999999998744 2367776653

>PRK06105 aminotransferase; Provisional

Probab=99.38  E-value=7.9e-11  Score=110.76  Aligned_cols=252  Identities=15%  Similarity=0.087  Sum_probs=151.4

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      ..+++.+|||..|.-... .--.+|.+.+++.++++.... ...  .....+.+..+++.+.+..+.  .-+.++++++|
T Consensus        44 D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SG  118 (460)
T PRK06105         44 DDAGKRYIEGMAGLWSVA-LGFSEQRLVEAAARQMKKLPFYHTF--SHKSHGPVIDLAEKLVAMAPV--PMSKVFFTNSG  118 (460)
T ss_pred             ECCCCEEEEcchhHHhcc-CCCCCHHHHHHHHHHHHhCCCeecc--cccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCc
Confidence            345899999987721111 123578999999999875321 111  111233444566666553321  23689999999


Q ss_pred             HHHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCCcc--------
Q 021547          120 MEAVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERGWE--------  171 (311)
Q Consensus       120 ~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~~~--------  171 (311)
                      ++|++++++....       +++.+|+.....|.+....+.. .+.            .+..++......+.        
T Consensus       119 seAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  198 (460)
T PRK06105        119 SEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEA  198 (460)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHH
Confidence            9999999987531       3436888888887764322211 111            11112111000000        


Q ss_pred             ---cCHHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          172 ---VDLEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       172 ---~d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                         ...+++++.+.    .+..++++.......|.. .+++-+++|.++|++||+++|.||++.++...|+- .....++
T Consensus       199 ~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~-f~~~~~~  277 (460)
T PRK06105        199 FATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNM-FGCETFG  277 (460)
T ss_pred             HHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchh-hhHHhcC
Confidence               01345666552    234455555556666775 57888999999999999999999999877544532 2233333


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh--------hccccCCCchhHHHHHhhhh
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC--------LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l~  309 (311)
                      -.++++   +++|.++...+++|.+++.+        ++++.+...        ...+++.+|++.+++.+.|+
T Consensus       278 v~PDi~---~~gK~lggG~~P~~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~  340 (460)
T PRK06105        278 IKPDIL---VMSKQLSSSYQPLSAVLMNE--------KVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLA  340 (460)
T ss_pred             CCCCee---eeecccccCcccceEEEEcH--------HHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHH
Confidence            333444   88999764336899999853        366665431        23467888998888776654

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.37  E-value=1.2e-10  Score=108.82  Aligned_cols=245  Identities=16%  Similarity=0.088  Sum_probs=151.2

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.+|||..|.-... .--.+|.+.+++.+++.......+ +    .+.+..+++.+.+..+   ..+.+++++++++
T Consensus        50 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~-~----~~~~~~la~~l~~~~p---~~~~v~f~~sGse  120 (428)
T PRK12389         50 VDGNKYIDYLAAYGPII-TGHAHPHITKAITEAAENGVLYGT-P----TELEIEFAKMLKEAIP---SLEKVRFVNSGTE  120 (428)
T ss_pred             CCCCEEEEccccccccc-cCCCCHHHHHHHHHHHHhCCccCC-C----CHHHHHHHHHHHHhCC---CCcEEEEeCCHHH
Confidence            35888899877632111 123678899999999875432222 1    2334555555554332   2468999999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCcEEE--------EeeccCCCC----cccCHHHHHhhcC---CC
Q 021547          122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHIEVR--------HFDLLPERG----WEVDLEAVEALAD---EN  184 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~--------~~~~~~~~~----~~~d~~~l~~~l~---~~  184 (311)
                      |++.+++.... .|+.+|+.....|.+....+.. .+....        .++.....+    ...|++.+++.+.   .+
T Consensus       121 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  200 (428)
T PRK12389        121 AVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDE  200 (428)
T ss_pred             HHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCc
Confidence            99998887653 4446888888888775433222 221110        000000000    0126788887764   24


Q ss_pred             ccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547          185 TAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW  263 (311)
Q Consensus       185 ~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~  263 (311)
                      ..++++.......|... +++.+++|.++|++||+++|.||++.++. .+.. .....++-.++++   +++|.++ .|+
T Consensus       201 vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~R-t~~~-~a~~~~gv~PDiv---t~gK~lg-gG~  274 (428)
T PRK12389        201 VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFR-FMYG-GAQDLLGVEPDLT---ALGKIIG-GGL  274 (428)
T ss_pred             EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccc-cCcc-hhhHHhCCCCCee---eechhhc-CCC
Confidence            45555555566677655 67779999999999999999999999873 2211 1111222233333   8899974 579


Q ss_pred             eeeEEEeeCCCCccchhhHHHHHhh----hhccccCCCchhHHHHHhhhh
Q 021547          264 RFGWLATNDPNGVLQKSGIVGSIKA----CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       264 r~G~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++|.++++.        ++++.+..    ....+++.+|++.+++.+.|+
T Consensus       275 Pi~av~~~~--------~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~  316 (428)
T PRK12389        275 PIGAYGGRK--------DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLE  316 (428)
T ss_pred             ceeEEeEHH--------HHHhhhccCCCcccccCCccCHHHHHHHHHHHH
Confidence            999997742        46666642    233456789998888877664

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.37  E-value=9.7e-11  Score=110.07  Aligned_cols=247  Identities=11%  Similarity=0.033  Sum_probs=147.0

Q ss_pred             CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      +++.++||..+...   .++ .+|.+.+++.+++....   +....-..+.+..+++.+.+..+.  ..+.+++++++++
T Consensus        70 dG~~ylD~~g~~~~---~lGh~~p~v~~Ai~~ql~~~~---~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGse  141 (459)
T PRK06082         70 DGKKYMDFHGNNVH---QLGYGHPHVIEKVKEQMAKLP---FSPRRFTNETAIECAEKLTEIAGG--ELNRVLFAPGGTS  141 (459)
T ss_pred             CCCEEEEcccHhhc---ccCCCCHHHHHHHHHHHHhCC---CccCccCCHHHHHHHHHHHHhCCC--CCCEEEECCCcHH
Confidence            47888998733221   122 78999999999987432   111111234455566666554331  2368999999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEecCCCCcchHH-HHHHcCcE------------EEEeeccCCCC--cc-cC------HHHHH
Q 021547          122 AVEIILTVITR-LGAANILLPRPGWPFYES-FAKRNHIE------------VRHFDLLPERG--WE-VD------LEAVE  178 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~--~~-~d------~~~l~  178 (311)
                      |++++++.... .|+.+|+.....|.+... .....+..            +..++......  +. .+      ++.++
T Consensus       142 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  221 (459)
T PRK06082        142 AIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLE  221 (459)
T ss_pred             HHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHH
Confidence            99998887643 343678887777776432 22222211            12222110000  00 01      24566


Q ss_pred             hhcC--CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcc
Q 021547          179 ALAD--ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISK  256 (311)
Q Consensus       179 ~~l~--~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK  256 (311)
                      +.+.  .+..++++....+..+...+++-+++|.++|++||+++|.||++.++...|.. .....++-.++++   .++|
T Consensus       222 ~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~-fa~e~~gv~PDiv---~~gK  297 (459)
T PRK06082        222 YVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEW-FTHQAYGIEPDIL---CIGK  297 (459)
T ss_pred             HHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchh-hHhHhhCCCCCEE---Eecc
Confidence            6664  24445555544555455778888999999999999999999999987545532 2223333333444   4899


Q ss_pred             cCCCCcceeeEEEeeCCCCccchhhHHHHHhh-hhccccCCCchhHHHHHhhhh
Q 021547          257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       257 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .++...+++|.+++.+        ++...... ....+++.++++.+++.+.|+
T Consensus       298 gl~gG~~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~  343 (459)
T PRK06082        298 GLGGGLVPIAAMITKD--------KYNTAAQISLGHYTHEKSPLGCAAALATIE  343 (459)
T ss_pred             cccCCCCcceEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence            9764226999998853        23332221 112466788988888777664

>PRK12403 putative aminotransferase; Provisional

Probab=99.36  E-value=9.8e-11  Score=110.12  Aligned_cols=250  Identities=18%  Similarity=0.130  Sum_probs=145.0

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPM-FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      .+++.+|||..|--....+. .+|.+.+++.++++....  +... .+..+....+++.+....+  ...+.++++++|+
T Consensus        51 ~dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~--~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs  125 (460)
T PRK12403         51 NDGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPY--YNMFFHTTHPAVIELSELLFSLLP--GHYSHAIYTNSGS  125 (460)
T ss_pred             CCCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCC--eecccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcH
Confidence            35889999877621111223 679999999999875321  1111 1223344445555544332  1236899999999


Q ss_pred             HHHHHHHHHHhc-------CCCCEEEecCCCCcchH-HHHHHcCcE-----------EEEeeccCC--CCccc-------
Q 021547          121 EAVEIILTVITR-------LGAANILLPRPGWPFYE-SFAKRNHIE-----------VRHFDLLPE--RGWEV-------  172 (311)
Q Consensus       121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~-~~~~~~g~~-----------~~~~~~~~~--~~~~~-------  172 (311)
                      +|++.+++....       ++...|+....+|.+.. ......+..           +..++....  ..+..       
T Consensus       126 eA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  205 (460)
T PRK12403        126 EANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGR  205 (460)
T ss_pred             HHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHH
Confidence            999999988752       33134555555666542 222222211           222221100  00011       


Q ss_pred             -CHHHHHhhc-C---CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547          173 -DLEAVEALA-D---ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV  246 (311)
Q Consensus       173 -d~~~l~~~l-~---~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~  246 (311)
                       ..+.+++.+ +   ++..++++.......|.. .+++-+++|.++|++||+++|.||++.++...|..+ ....++-.+
T Consensus       206 ~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~e~~gv~P  284 (460)
T PRK12403        206 RAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWF-AHEHFGFEP  284 (460)
T ss_pred             HHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-hhhhcCCCC
Confidence             124455543 2   234455555556666765 467779999999999999999999998875555322 223333333


Q ss_pred             CeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh----h-hccccCCCchhHHHHHhhhh
Q 021547          247 PVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA----C-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       247 ~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +++   +++|.++ .| +.+|.+++..        ++++.+..    + .+.+++.+|++.+++.+.|+
T Consensus       285 Div---~~gK~lg-gG~~Piga~v~~~--------~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~  341 (460)
T PRK12403        285 DTL---SIAKGLT-SGYVPMGGLVLSK--------RIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLK  341 (460)
T ss_pred             CeE---EEccccc-ccccceEEEEECH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence            444   4899965 47 4899988743        35565532    1 23466788888888877664

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.36  E-value=1.2e-10  Score=109.24  Aligned_cols=250  Identities=15%  Similarity=0.047  Sum_probs=152.8

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.+|||..|--.. ..--.+|.+.+++.+++......  ....-..+.+..+++.+.+..+.  ..+.++++++|++
T Consensus        51 ~dG~~ylD~~~g~~~~-~lGh~~p~v~~Ai~~ql~~~~~~--~~~~~~~~~~~~lAe~L~~~~p~--~~~~v~f~~sGse  125 (453)
T PRK06943         51 RDGRRYLDAISSWWVN-LFGHANPRINAALKDQLDTLEHA--MLAGCTHEPAIELAERLAALTGG--TLGHAFFASDGAS  125 (453)
T ss_pred             CCCCEEEEcchHHHHh-cCCCCCHHHHHHHHHHHHhcCCc--cccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCCHH
Confidence            3588899997662111 11235789999999998743210  00011123445566666553331  2258999999999


Q ss_pred             HHHHHHHHHh-------cCCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCC--cc--------
Q 021547          122 AVEIILTVIT-------RLGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERG--WE--------  171 (311)
Q Consensus       122 a~~~~~~~l~-------~~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~--~~--------  171 (311)
                      |++.+++...       .+|+.+|+....+|.+....+.. .+.            .+..++......  +.        
T Consensus       126 Ave~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  205 (453)
T PRK06943        126 AVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAA  205 (453)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHH
Confidence            9999888763       13447899888888764321111 110            122222211000  00        


Q ss_pred             cCHHHHHhhcC---CCccEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547          172 VDLEAVEALAD---ENTAAIVIIN-PCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV  246 (311)
Q Consensus       172 ~d~~~l~~~l~---~~~~~i~i~~-p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~  246 (311)
                      -+++.+++.+.   ++..++++.. .+...|. ..+++.++++.++|++||+++|.||++.++...|. ......++-.+
T Consensus       206 ~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~-~fa~~~~gv~P  284 (453)
T PRK06943        206 RALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGT-FFACEQAGVWP  284 (453)
T ss_pred             HHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcc-hhHHHhCCCCC
Confidence            12456666664   3455566655 3666677 45777899999999999999999999988755553 22333344445


Q ss_pred             CeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh-------hhccccCCCchhHHHHHhhhh
Q 021547          247 PVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA-------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       247 ~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +++   .++|.++ .| +++|.+++.+        ++.+.+..       ....+++.++++.+++.+.|+
T Consensus       285 Div---t~gKgl~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~  343 (453)
T PRK06943        285 DFL---CLSKGIS-GGYLPLSLVLSRD--------AIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLD  343 (453)
T ss_pred             CeE---eeehhhc-cCcccceEEEEcH--------HHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHH
Confidence            556   5699965 58 5999999854        36665542       133466789999888887764

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.35  E-value=1.9e-10  Score=107.63  Aligned_cols=251  Identities=16%  Similarity=0.118  Sum_probs=148.7

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      ..+++.++||..|.-.. ..-..+|.+.+++.+++..-. ...+.   ...+.+..+++.+.+..+  -..+.|+++++|
T Consensus        42 D~dG~~ylD~~~g~~~~-~lGh~~p~v~~ai~~ql~~l~~~~~~~---~~~~~~~~la~~l~~~~p--~~~~~v~f~~sG  115 (442)
T PRK13360         42 THDGRRVLDGTAGLWCV-NAGHGRPEIVEAVRAQAGELDYAPAFQ---MGHPKAFELANRIAEIAP--GGLNHVFFTNSG  115 (442)
T ss_pred             eCCCCEEEECchhHHHh-ccCCCCHHHHHHHHHHHHhCCCcccCC---cCCHHHHHHHHHHHHhCC--CCCCEEEEeCCc
Confidence            34588999997662111 112367899999999987421 11111   112334455565554332  123589999999


Q ss_pred             HHHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHH-HcC------------cEEEEeeccCC--C-Cccc----
Q 021547          120 MEAVEIILTVITR-------LGAANILLPRPGWPFYESFAK-RNH------------IEVRHFDLLPE--R-GWEV----  172 (311)
Q Consensus       120 ~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~-~~g------------~~~~~~~~~~~--~-~~~~----  172 (311)
                      ++|++.+++....       +++.+|+.....|.+....+. ..|            ..+..+|....  . .+..    
T Consensus       116 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  195 (442)
T PRK13360        116 SESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPE  195 (442)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHH
Confidence            9999988886542       233689988888877532211 111            11222222110  0 0111    


Q ss_pred             ----CHHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          173 ----DLEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       173 ----d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                          ..+.+++.+.    ++..++++.......|.. .+++.+++|.++|++||+++|+||++.++...|..+ ....++
T Consensus       196 ~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~g  274 (442)
T PRK13360        196 HGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPF-AAQYFG  274 (442)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcC
Confidence                1356666663    234445555546666775 467779999999999999999999997764444332 222333


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      -.++++   +++|.++...+++|.+++++        ++++.+..        ..+.++..++++.+++.+.|+
T Consensus       275 v~PDiv---t~gK~l~gG~~P~gav~~~~--------~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~  337 (442)
T PRK13360        275 VTPDLL---TCAKGLTNGAIPMGAVFVSS--------EIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLD  337 (442)
T ss_pred             CCCcee---eeeeccccCccceEEEEEcH--------HHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHH
Confidence            333333   88999754337899988753        35555532        123456778888887777654

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.35  E-value=1.3e-10  Score=109.16  Aligned_cols=248  Identities=16%  Similarity=0.103  Sum_probs=146.2

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN--CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      .+++.++||..|--... .--.+|.+.+++.+++......  .|..    .+.+..+++.+.+..+  ...+.++++++|
T Consensus        50 ~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~ql~~~~~~~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~SG  122 (457)
T PRK05639         50 VDGNVFIDFLAGAAAAS-TGYSHPKLVKAVQEQVALIQHSMIGYTH----SERAIRVAEKLAEISP--IENPKVLFGLSG  122 (457)
T ss_pred             CCCCEEEECCcCHHhhc-cCCCCHHHHHHHHHHHHhccccccCccC----CHHHHHHHHHHHhhCC--CCcCEEEEeCch
Confidence            35888999987731111 1236788999999998742211  1222    2334445555554332  123689999999


Q ss_pred             HHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCc-------------EEEEeeccCCCC--cc----cCH----
Q 021547          120 MEAVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHI-------------EVRHFDLLPERG--WE----VDL----  174 (311)
Q Consensus       120 ~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~~--~~----~d~----  174 (311)
                      ++|++.+++.... .|+.+|+.....|.+....+.. .+.             .+..+|......  +.    -+.    
T Consensus       123 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  202 (457)
T PRK05639        123 SDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELI  202 (457)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHH
Confidence            9999998887653 4446888888888765432221 111             122333211000  00    012    


Q ss_pred             ----HHHHhhc------CCCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          175 ----EAVEALA------DENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       175 ----~~l~~~l------~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                          +.+++.+      ..+..++++...+...|.. .+++-+++|.++|++||+++|.||++.++...|..+ ....++
T Consensus       203 ~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~g  281 (457)
T PRK05639        203 NRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWF-ASEWFE  281 (457)
T ss_pred             HHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHH-HHHhcC
Confidence                2344433      2345555555556666774 467779999999999999999999998865445321 222233


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      -.++++   .++|.++ .|..+|.+++..        ++++........++..+|++.+++.+.|+
T Consensus       282 v~PDiv---~~gK~l~-gG~pi~av~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~l~  335 (457)
T PRK05639        282 VKPDLI---IFGKGVA-SGMGLSGVIGRK--------ELMDLTSGSALLTPAANPVISAAAEATLE  335 (457)
T ss_pred             CCCCEE---Eechhhc-CCCcceeEEehH--------HHHhhcCCCcccCCCcCHHHHHHHHHHHH
Confidence            333444   3899965 479999999853        35552222222456778887777766653

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.34  E-value=1.2e-10  Score=108.46  Aligned_cols=247  Identities=14%  Similarity=0.046  Sum_probs=147.2

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.+|||..|.-... .--.+|.+.+++.+++.......+.     .+.+..+++.+.+..+  ...+.++++++|+
T Consensus        49 D~dG~~yiD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~L~~~~~--~~~~~v~f~~SGs  120 (433)
T PRK00615         49 DSLGKTFIDFCGSWGSLI-HGHSHPKICDAIQQGAERGTSYGLT-----SEQEILFAEELFSYLG--LEDHKIRFVSSGT  120 (433)
T ss_pred             ECCCCEEEEcccchhccc-cCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCchH
Confidence            345888999987632211 1236789999999998754321111     2234445555554332  1236899999999


Q ss_pred             HHHHHHHHHHhc-CCCCEEEecCCCCcchHHH---H-HHcCcE---E-EEeeccCCCCc-----ccCHHHHHhhcCC---
Q 021547          121 EAVEIILTVITR-LGAANILLPRPGWPFYESF---A-KRNHIE---V-RHFDLLPERGW-----EVDLEAVEALADE---  183 (311)
Q Consensus       121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~---~-~~~g~~---~-~~~~~~~~~~~-----~~d~~~l~~~l~~---  183 (311)
                      +|++.+++.... .|+.+|+....+|.+....   . ...+-.   . ......+....     .-|++.+++.+..   
T Consensus       121 EA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~  200 (433)
T PRK00615        121 EATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGH  200 (433)
T ss_pred             HHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCC
Confidence            999998887653 4546888888888774311   1 111100   0 00000000000     1267788877642   


Q ss_pred             CccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547          184 NTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG  262 (311)
Q Consensus       184 ~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G  262 (311)
                      +..++++.......|... +++.+++|.++|++||+++|+||++.++ ..|. ......++-.++++   +++|.++ .|
T Consensus       201 ~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~-~ga~~~~gv~PDi~---~~gK~lg-gG  274 (433)
T PRK00615        201 RVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQ-GGAAAIYHVKPDIT---VYGKILG-GG  274 (433)
T ss_pred             ceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccH-hHHHHhcCCCCCeE---EEccccc-CC
Confidence            344445444455567655 5677999999999999999999999776 3332 22222232233333   5899975 46


Q ss_pred             ceeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547          263 WRFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       263 ~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +.+|+++++.        ++++.+...    ...++..+|++.+++.+.|+
T Consensus       275 ~p~~av~~~~--------~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~  317 (433)
T PRK00615        275 LPAAAVVAHK--------SIMDHLAPEGTIFQAGTLSGNPLAMAAGKASIN  317 (433)
T ss_pred             cceeeeeecH--------HHHhhhcCCCCcccCCCCcccHHHHHHHHHHHH
Confidence            8899998853        366666421    22355678888777777664

>PRK07046 aminotransferase; Validated

Probab=99.33  E-value=3.2e-10  Score=106.35  Aligned_cols=233  Identities=17%  Similarity=0.145  Sum_probs=146.9

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      ++..+|||..|.-.. ..--.+|.+.+++.+++.......+.     .+....+++.+.+..    ..+.+.+++++++|
T Consensus        73 DG~~yiD~~~g~g~~-~lGh~~p~i~~Av~~q~~~~~~~~~~-----~~~~~~lAe~l~~~~----~~~~v~F~nSGtEA  142 (453)
T PRK07046         73 DGHRYDDFCLGDTGA-MFGHSPAPVARALAEQARRGLTTMLP-----SEDAAWVGEELARRF----GLPYWQVATTATDA  142 (453)
T ss_pred             CCCEEEEeccccccc-ccCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHHh----CCCEEEEECCHHHH
Confidence            477888887663111 11236789999999998864332221     234455555555433    24689999999999


Q ss_pred             HHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH---cCc----------------EEEEeeccCCCCcccCHHHHHhhcC
Q 021547          123 VEIILTVITR-LGAANILLPRPGWPFYESFAKR---NHI----------------EVRHFDLLPERGWEVDLEAVEALAD  182 (311)
Q Consensus       123 ~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~---~g~----------------~~~~~~~~~~~~~~~d~~~l~~~l~  182 (311)
                      ...+++.... .|+++|+....+|.+.......   .+.                .+..++      + -|++.+++.+.
T Consensus       143 ~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~-nd~~~l~~~l~  215 (453)
T PRK07046        143 NRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE------F-NDLAALEAALA  215 (453)
T ss_pred             HHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC------C-CCHHHHHHHhC
Confidence            9988887653 4557899888888876322111   110                011111      1 27888888875


Q ss_pred             C-CccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCc--cCCCCCCcccccCCCCCeEEEecCcccC
Q 021547          183 E-NTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLA--FGSTPYIPMGVFGSIVPVITLGSISKRW  258 (311)
Q Consensus       183 ~-~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~--~~~~~~~~~~~~~~~~~~i~i~s~sK~~  258 (311)
                      . +..++++.......|.. .+++.++++.++|++||+++|.||+.. +.  +++.    ...++-.++++   +++|.+
T Consensus       216 ~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~----~~~~gv~PDi~---t~gK~l  287 (453)
T PRK07046        216 DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGY----TRAHGLEPDFL---VVGKPI  287 (453)
T ss_pred             CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcch----hHHhCCCccce---eehhhh
Confidence            4 44444444434444554 456779999999999999999999986 32  2221    12222233334   689997


Q ss_pred             CCCcceeeEEEeeCCCCccchhhHHHHHhhh----------hccccCCCchhHHHHHhhhh
Q 021547          259 IVPGWRFGWLATNDPNGVLQKSGIVGSIKAC----------LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       259 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~q~~~~~~l~  309 (311)
                      + .|+++|.+++..        ++++.+...          .+.+++.++++.+++.+.|+
T Consensus       288 g-gG~Pi~av~g~~--------~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~  339 (453)
T PRK07046        288 A-GGVPCAVYGFSA--------ELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLA  339 (453)
T ss_pred             c-CCCcceeeeehH--------HHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHH
Confidence            5 589999988743        467766521          23366788998888877664

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.33  E-value=2.6e-10  Score=103.18  Aligned_cols=238  Identities=17%  Similarity=0.158  Sum_probs=157.0

Q ss_pred             cCCCCCeeecCCC-CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           41 KNDPRPVIPLGHG-DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        41 ~~~~~~~i~~~~g-~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      +.++..+|||..+ .|..+  --.+|.+.++++++++.+.  .|..+   .++.-.+|+.+.+..+   ..+.|-+++++
T Consensus        49 DvDGn~YIDy~~~~Gp~il--GH~~p~V~~Av~~~l~~G~--~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSG  118 (432)
T COG0001          49 DVDGNEYIDYVLGWGPLIL--GHAHPAVVEAVQEQLERGL--SFGAP---TELEVELAELLIERVP---SIEKVRFVNSG  118 (432)
T ss_pred             eCCCCEeeehhccCccccc--CCCCHHHHHHHHHHHHhcC--CCCCC---CHHHHHHHHHHHHhcC---cccEEEEecch
Confidence            3468899999988 34433  2357889999999998764  56653   2455556666666443   44889999999


Q ss_pred             HHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHH-HHcCcE-------------------EEEeeccCCCCcccCHHHHH
Q 021547          120 MEAVEIILTVITR-LGAANILLPRPGWPFYESFA-KRNHIE-------------------VRHFDLLPERGWEVDLEAVE  178 (311)
Q Consensus       120 ~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~-~~~g~~-------------------~~~~~~~~~~~~~~d~~~l~  178 (311)
                      |+|...+++.-.. .|+|+|+...-+|.+..+.+ ...|-.                   +..+|.       -|++.++
T Consensus       119 TEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-------ND~~al~  191 (432)
T COG0001         119 TEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-------NDLEALE  191 (432)
T ss_pred             hHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-------CCHHHHH
Confidence            9999888877653 45589999998888755433 222211                   222222       2788888


Q ss_pred             hhcCC---CccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecC
Q 021547          179 ALADE---NTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSI  254 (311)
Q Consensus       179 ~~l~~---~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~  254 (311)
                      +++.+   +..+|++.......|.+ ..++.++.|.++|+++|+++|.||+.-++...-......  +.-.++   +.++
T Consensus       192 ~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~--~gi~PD---lttl  266 (432)
T COG0001         192 EAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGY--YGVEPD---LTTL  266 (432)
T ss_pred             HHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccc--cCcCcc---hhhh
Confidence            88765   34444444434445564 455669999999999999999999998765430011111  111222   3489


Q ss_pred             cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547          255 SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       255 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .|. ...|+++|.+-+..        ++++.+...    +..+.+.+|++.+|..+.|+
T Consensus       267 GKi-IGGGlP~ga~gGr~--------eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~  316 (432)
T COG0001         267 GKI-IGGGLPIGAFGGRA--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLE  316 (432)
T ss_pred             hhh-hcCCcceeeeccHH--------HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHH
Confidence            999 46799999987742        577766543    33457788888877766654

>PRK06062 hypothetical protein; Provisional

Probab=99.32  E-value=2.1e-10  Score=107.59  Aligned_cols=250  Identities=18%  Similarity=0.143  Sum_probs=151.9

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.+|||..|.-... .--.+|.+.+++.+++.....  +.. .-..+.+..+++.+.+..+  -..+.|+++++++
T Consensus        49 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~--~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs  122 (451)
T PRK06062         49 DYEGRRYLDFSSQLVNTN-IGHQHPKVVAAIQEQAARLCT--VAP-AHANDARSEAARLIAERAP--GDLSKVFFTNGGA  122 (451)
T ss_pred             ECCCCEEEEcccCHHhhc-CCCCCHHHHHHHHHHHHhcCC--cCC-ccCCHHHHHHHHHHHHhCC--CCCCEEEEcCChH
Confidence            335889999987621111 123578899999999874321  111 1123445556666654332  1236899999999


Q ss_pred             HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCc-----------EEEEeeccCCCC--cc--cC-------HHH
Q 021547          121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHI-----------EVRHFDLLPERG--WE--VD-------LEA  176 (311)
Q Consensus       121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~-----------~~~~~~~~~~~~--~~--~d-------~~~  176 (311)
                      +|++.+++.... .|+.+|+.....|.+....+.. .+.           .+..++......  +.  -+       ++.
T Consensus       123 EAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  202 (451)
T PRK06062        123 DANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAH  202 (451)
T ss_pred             HHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHH
Confidence            999998887653 4446888888888765433322 111           111111110000  10  12       566


Q ss_pred             HHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEE
Q 021547          177 VEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITL  251 (311)
Q Consensus       177 l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i  251 (311)
                      +++.++    ++..++++.......|.. .+++-+++|.++|++||+++|+||++.++...|.. .....++-.++++  
T Consensus       203 le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~-~a~~~~gv~PDi~--  279 (451)
T PRK06062        203 LERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKW-FAIEHFGVVPDLI--  279 (451)
T ss_pred             HHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHH-HHHHhcCCCCCee--
Confidence            677664    234455555545566776 46777999999999999999999999986444432 1222233333434  


Q ss_pred             ecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh---hccccCCCchhHHHHHhhhh
Q 021547          252 GSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC---LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       252 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~  309 (311)
                       +++|.++ .| +++|.+++.+        ++++.+...   ...+++.+|++.+++.+.|+
T Consensus       280 -t~gK~lg-gG~~Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~  331 (451)
T PRK06062        280 -TFAKGVN-SGYVPLGGVAISE--------AIAATFADRPYPGGLTYSGHPLACAAAVATIN  331 (451)
T ss_pred             -eechhhh-cCCcCcEEEEEcH--------HHHHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence             7899965 46 5999999854        366666422   33466778888888777664

>PRK06149 hypothetical protein; Provisional

Probab=99.32  E-value=2.7e-10  Score=116.13  Aligned_cols=244  Identities=16%  Similarity=0.107  Sum_probs=145.1

Q ss_pred             CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCC-CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMFNC-YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      +++.++||..|..    .++ .+|.+.+++.+++....... |.     .+....+++.+.+...  -..+.++++++|+
T Consensus       583 dG~~ylD~~~~~~----~lGh~hp~v~~Ai~~q~~~l~~~~~~~-----~~~~~elae~L~~~~p--~~~~~v~f~~SGs  651 (972)
T PRK06149        583 AGRSYLDMVNNVT----VLGHGHPRLAAAAARQWSLLNTNSRFH-----YAAVAEFSERLAALAP--DGLDTVFLVNSGS  651 (972)
T ss_pred             CCCEEEECCCCcc----ccCCCCHHHHHHHHHHHHhcccccccc-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence            4888999986642    234 78999999999887432211 21     1233444555544322  1236899999999


Q ss_pred             HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-C-----c--------EEEEeeccCCC--Ccc-cC-----HHHH
Q 021547          121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-H-----I--------EVRHFDLLPER--GWE-VD-----LEAV  177 (311)
Q Consensus       121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g-----~--------~~~~~~~~~~~--~~~-~d-----~~~l  177 (311)
                      +|++.+++.... .|+.+|+.....|.+....+... +     .        .+..++.....  .+. .+     .+++
T Consensus       652 EA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~  731 (972)
T PRK06149        652 EANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDV  731 (972)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHH
Confidence            999998885432 34367887777777543221110 0     0        01222211100  011 11     1333


Q ss_pred             HhhcC------CCccEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547          178 EALAD------ENTAAIVIINPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT  250 (311)
Q Consensus       178 ~~~l~------~~~~~i~i~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  250 (311)
                      ++.++      .++.++++.......| ...+++-++++.++|++||+++|.||++.++...|..+..+..++-.++++ 
T Consensus       732 ~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv-  810 (972)
T PRK06149        732 VAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII-  810 (972)
T ss_pred             HHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE-
Confidence            33221      2344445444444444 456778899999999999999999999977655554333444444344444 


Q ss_pred             EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh--hhccccCCCchhHHHHHhhhh
Q 021547          251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA--CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l~  309 (311)
                        +++|.++ .|..+|.+++..        ++++.+..  ....+.+.+|++.+++.+.|+
T Consensus       811 --t~gK~lg-~G~Pl~av~~~~--------~i~~~~~~~~~~~sT~~gnP~~~aaala~L~  860 (972)
T PRK06149        811 --TMAKGMG-NGHPLGAVITRR--------EIAEALEAEGYFFSSTGGSPVSCRIGMAVLD  860 (972)
T ss_pred             --Eeccccc-CCeeeEEEEEcH--------HHHhhhccCCcccCCCCCCHHHHHHHHHHHH
Confidence              8899975 689999999854        36666643  222345788988888887764

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.32  E-value=2.9e-10  Score=106.55  Aligned_cols=252  Identities=16%  Similarity=0.110  Sum_probs=148.0

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++++|||..|--... .--.+|.+.+++.+++.....  +....-..+.+..+++.+.+..+.  ..+.|+++++|+
T Consensus        45 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGs  119 (445)
T PRK09221         45 DADGRKILDGTAGLWCCN-AGHGRPEIVEAVARQAATLDY--APAFQMGHPLAFELAERLAELAPG--GLDHVFFTNSGS  119 (445)
T ss_pred             eCCCCEEEEccccHhhcc-CCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcH
Confidence            346889999987621111 123678899999998874211  111001123344466666543321  236899999999


Q ss_pred             HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cC------------cEEEEeeccC-CC--Cccc-----
Q 021547          121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NH------------IEVRHFDLLP-ER--GWEV-----  172 (311)
Q Consensus       121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g------------~~~~~~~~~~-~~--~~~~-----  172 (311)
                      +|++.+++....       +++.+|+.....|.+....+.. .+            ..+..++... ..  .+..     
T Consensus       120 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (445)
T PRK09221        120 ESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEH  199 (445)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHH
Confidence            999998876542       2336899888888765322111 11            1122222210 00  0000     


Q ss_pred             ---CHHHHHhhcC----CCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547          173 ---DLEAVEALAD----ENTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS  244 (311)
Q Consensus       173 ---d~~~l~~~l~----~~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~  244 (311)
                         ..+++++.+.    ++..++++.......|... +++.+++|.++|++||+++|+||++.++...|..+ ....++-
T Consensus       200 ~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~-~~~~~gv  278 (445)
T PRK09221        200 GAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAF-AAERFGV  278 (445)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhh-HHHhcCC
Confidence               1345666553    2445556665566777754 56679999999999999999999998765444322 2223332


Q ss_pred             CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh-------h-hccccCCCchhHHHHHhhhh
Q 021547          245 IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-------C-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       245 ~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .+++   .+++|.++...+++|.+++++        ++++.+..       + .+.+++.++++.+++.+.|+
T Consensus       279 ~PDi---~~~gK~l~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~  340 (445)
T PRK09221        279 TPDI---ITFAKGLTNGAIPMGAVIASD--------EIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLD  340 (445)
T ss_pred             CCCE---EEeccccccCcccceeeEEcH--------HHHHhhccCcccccccccccCCCcCHHHHHHHHHHHH
Confidence            3333   388999754337899988753        35555532       1 23456778888777776653

>PRK07481 hypothetical protein; Provisional

Probab=99.32  E-value=3.8e-10  Score=105.90  Aligned_cols=253  Identities=14%  Similarity=0.070  Sum_probs=150.3

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.+|||..|.-... .--.+|.+.+++.+++......... .....+.+..+++.+....+. -..+.++++++|+
T Consensus        38 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~~lae~L~~~~~~-~~~~~v~f~~sGs  114 (449)
T PRK07481         38 DIDGKKLLDGVGGLWNVN-VGHNREEVKEAIVRQLDELEYYSTF-DGTTHPRAIELSYELIDMFAP-EGMRRVFFSSGGS  114 (449)
T ss_pred             eCCCCEEEECchhHHhhc-CCCCCHHHHHHHHHHHHhccceecc-cccCCHHHHHHHHHHHHhcCC-CCCCEEEEcCchH
Confidence            346889999976621111 1235788999999998753211100 001223445566666553321 1245899999999


Q ss_pred             HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcC-c------------EEEEeeccCCC--Ccc-cCHHH-
Q 021547          121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRNH-I------------EVRHFDLLPER--GWE-VDLEA-  176 (311)
Q Consensus       121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g-~------------~~~~~~~~~~~--~~~-~d~~~-  176 (311)
                      +|++.+++....       +|+.+|+.....|.+....+.... .            .+..++.....  .+. .|.+. 
T Consensus       115 EAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~  194 (449)
T PRK07481        115 DSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEEL  194 (449)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHH
Confidence            999998887642       344689988888887543222211 1            11222111000  011 13333 


Q ss_pred             -------HHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547          177 -------VEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS  244 (311)
Q Consensus       177 -------l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~  244 (311)
                             +++.+.    +++.++++...+...|.. .+++.++++.++|++||+++|.||++.++...|..+ ....++-
T Consensus       195 ~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv  273 (449)
T PRK07481        195 ARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWF-GSRGWGV  273 (449)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhh-HhhhcCC
Confidence                   333332    345555655556666774 567779999999999999999999999875555322 2233333


Q ss_pred             CCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547          245 IVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       245 ~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .++++   .++|.++ .| +++|.+++.+        ++++.+..        ..+.+++.++++.+++.+.|+
T Consensus       274 ~PDiv---~~gKgl~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~  335 (449)
T PRK07481        274 KPDIM---CLAKGIT-SGYVPLGATMVNA--------RIADAFEANADFGGAIMHGYTYSGHPVACAAALATLD  335 (449)
T ss_pred             CCCEE---EEeeccc-CCCcCceEEEEcH--------HHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHH
Confidence            44455   6699864 46 6999999853        36666642        133466789998888777654

>PRK07480 putative aminotransferase; Validated

Probab=99.32  E-value=2.9e-10  Score=106.79  Aligned_cols=252  Identities=16%  Similarity=0.117  Sum_probs=150.4

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.+|||..|.-... .-..+|.+.+++.+++....... .......+.+..+++.+....+  ...+.++++++|+
T Consensus        46 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs  121 (456)
T PRK07480         46 DSEGNKILDGMAGLWCVN-VGYGRKELADAAARQMRELPYYN-TFFKTTHPPAIELAAKLAEVAP--PGFNHVFFTNSGS  121 (456)
T ss_pred             eCCCCEEEEccchHHHhc-CCCCCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcH
Confidence            345889999987621111 12357899999999987532110 0001123445556666654332  2346899999999


Q ss_pred             HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHH-HHcCcE------------EEEeeccCCC--CcccC-----
Q 021547          121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFA-KRNHIE------------VRHFDLLPER--GWEVD-----  173 (311)
Q Consensus       121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~-~~~g~~------------~~~~~~~~~~--~~~~d-----  173 (311)
                      +|++.+++....       +|+.+|+.....|.+..... ...+..            +..++.....  .+..+     
T Consensus       122 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  201 (456)
T PRK07480        122 EANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFG  201 (456)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHH
Confidence            999998876642       34367888888777643221 111110            1111110000  00011     


Q ss_pred             ---HHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC
Q 021547          174 ---LEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI  245 (311)
Q Consensus       174 ---~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~  245 (311)
                         .+.+++.+.    .+..++++...+...|.. .+++.+++|.++|++||+++|.||++.++...|. ......++-.
T Consensus       202 ~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~-~~a~~~~gv~  280 (456)
T PRK07480        202 LAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGE-WFGSQHFGIK  280 (456)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcc-hhhhhhcCCC
Confidence               245554332    345556666556666775 4666799999999999999999999988754453 2223334434


Q ss_pred             CCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh----h-hccccCCCchhHHHHHhhhh
Q 021547          246 VPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA----C-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       246 ~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++++   +++|.++ .| +++|.+++.+        ++++.+..    + .+.+++.+|++.+++.+.|+
T Consensus       281 PDiv---~~gK~l~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~  338 (456)
T PRK07480        281 PDLM---TIAKGLT-SGYIPMGAVGVGD--------RVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLR  338 (456)
T ss_pred             CCee---eeehhhc-cCCccceEEEEcH--------HHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHH
Confidence            4444   7799865 46 4899999853        36666621    2 33567889999999888774

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.31  E-value=2.3e-11  Score=111.91  Aligned_cols=191  Identities=14%  Similarity=0.051  Sum_probs=123.3

Q ss_pred             eeecCCCCCCCCCCCCCcHH-HHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC-ChHHHHH
Q 021547           47 VIPLGHGDPAAFPCFRTAAV-AEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL-GCMEAVE  124 (311)
Q Consensus        47 ~i~~~~g~p~~~~~~~~~~~-~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~-g~~~a~~  124 (311)
                      ...|+.|-      ..+++. +++++.............-..-+.+.|+.++++++    .+ +.++|++++ |+|.+++
T Consensus        13 ~~~f~~Gp------~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~----~~-~~~~v~~~~gs~T~~~~   81 (378)
T PRK03080         13 DPRFSSGP------CKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLS----LP-EGYEVGIVPGSDTGAWE   81 (378)
T ss_pred             CCCcCCCC------cCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhC----CC-CCceEEEECCchHHHHH
Confidence            45576664      345666 99998865432111011112234556666666663    21 345788775 8999999


Q ss_pred             HHHHHHhcCCCCEEEecCCCCcc-hHH-HHHHcCc-EEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547          125 IILTVITRLGAANILLPRPGWPF-YES-FAKRNHI-EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       125 ~~~~~l~~~g~d~Vl~~~p~~~~-~~~-~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~  201 (311)
                      +++..+.+++.+.|+. .-.|.. +.. ..+..|. +++.++..  .+..+|+++++.     ++.+.+++..|.||..+
T Consensus        82 ~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~--~g~~~d~~~i~~-----~~~V~~~h~~t~tG~~~  153 (378)
T PRK03080         82 MALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEAD--YGSLPDLSAVDF-----DRDVVFTWNGTTTGVRV  153 (378)
T ss_pred             HHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccC--CCCCCCHhhcCC-----CCCEEEEecCCccceec
Confidence            9999998754155554 445554 222 3356788 88887653  334566665432     56788999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCC-CcceeeEEEeeC
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIV-PGWRFGWLATND  272 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~i~~~~  272 (311)
                      |   +++|++  +++|+++++|.+++..    ..+..+..+     .+++.|.+|+++. +|  +|++.++.
T Consensus       154 p---i~~I~~--~~~g~~~vVDa~qs~G----~~pidv~~i-----D~~~~s~~K~l~~P~G--~g~l~v~~  209 (378)
T PRK03080        154 P---VARWIG--ADREGLTICDATSAAF----ALPLDWSKL-----DVYTFSWQKVLGGEGG--HGMAILSP  209 (378)
T ss_pred             c---chhhcc--ccCCCeEEEecccccc----cCCCCHHHC-----cEEEEehhhhCCCCCc--eEEEEECH
Confidence            9   777777  7889999999999862    233333332     2999999998765 45  67766653

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=99.31  E-value=1.6e-10  Score=101.50  Aligned_cols=177  Identities=19%  Similarity=0.241  Sum_probs=113.0

Q ss_pred             HHHHHHHHHhhcCCCCCCCCCEEE---eCChHHHHHHHHHHHhcCCCCEEEe-cCCCCcchHHHH----------HHcCc
Q 021547           92 ARRAVAEYLNRDLPYKLSADDIYI---TLGCMEAVEIILTVITRLGAANILL-PRPGWPFYESFA----------KRNHI  157 (311)
Q Consensus        92 lr~~ia~~l~~~~g~~~~~~~v~~---t~g~~~a~~~~~~~l~~~g~d~Vl~-~~p~~~~~~~~~----------~~~g~  157 (311)
                      =|+.+.+.+.+.+|    .+.-++   -.++|+|+..++.++++|| |+.+. ...-|......+          +..|+
T Consensus        55 GRd~le~iyA~vfg----aE~ALVRpq~vSGTHAi~~~Lfg~LrpG-D~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi  129 (403)
T PF06838_consen   55 GRDKLERIYADVFG----AEDALVRPQFVSGTHAIALALFGVLRPG-DELLSITGKPYDTLEEVIGIRGNGPGSLKEFGI  129 (403)
T ss_dssp             HHHHHHHHHHHHCT-----SEEEEETTS-SHHHHHHHHHHHH--TT--EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-
T ss_pred             cHHHHHHHHHHHhC----chhhhhcccccchHHHHHHHHHhcCCCC-CeEEEcCCCchhhHHHHhCCCCCCCCChHHhCc
Confidence            35555555555443    344555   4678999999999999999 99885 444555444433          56678


Q ss_pred             EEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC-CCCCCccCCCHHHHHHHHHHHHHh--CCEEEEeccccCCccCCC
Q 021547          158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN-PCNPCGNVLTYQHLQKIAETARKL--GILVIADEVYGHLAFGST  234 (311)
Q Consensus       158 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~-p~nptG~~~~~~~l~~l~~l~~~~--~~~li~D~ay~~~~~~~~  234 (311)
                      ....+++.  +++.+|.+.+++.+++++|+++|.. ..+.+-..++.++++++++++++.  +++++||++|++|+-..+
T Consensus       130 ~Y~~v~L~--~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~E  207 (403)
T PF06838_consen  130 KYREVPLT--EDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQE  207 (403)
T ss_dssp             EEEE--B---TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-
T ss_pred             eeEEEeec--CCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccC
Confidence            88888876  4467999999999999999999985 467777789999999999999976  799999999999874432


Q ss_pred             CCCcccccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547          235 PYIPMGVFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       235 ~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~  290 (311)
                      | ..   ..   -.+..+|+-|+.|..= .--|||++.        .++++++....
T Consensus       208 P-~~---vG---ADl~aGSLIKNpGGgiAptGGYIaGr--------~~lVe~~a~RL  249 (403)
T PF06838_consen  208 P-TE---VG---ADLMAGSLIKNPGGGIAPTGGYIAGR--------KDLVERAAYRL  249 (403)
T ss_dssp             G-GG---GT----SEEEEETTSGGGTTT-SS-EEEEES--------HHHHHHHHHHH
T ss_pred             c-cc---cc---hhheeccceeCCCCCccCcCCEEech--------HHHHHHHHhhh
Confidence            2 22   12   2299999999965431 223788774        25787766543

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=99.31  E-value=3.2e-11  Score=109.15  Aligned_cols=250  Identities=18%  Similarity=0.144  Sum_probs=152.2

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.++||..|.-... .--.+|.+.+++++++.....  ........+.+..+++.+.+..+.  ..+.+++++++++
T Consensus        13 ~dG~~~lD~~~~~~~~~-lGh~~p~i~~ai~~~~~~~~~--~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGse   87 (339)
T PF00202_consen   13 VDGREYLDFMSGYGSVN-LGHNHPEIAEAIAEQANKLNY--VSFSGFTHPEAAELAEKLAELFPG--GLDRVFFANSGSE   87 (339)
T ss_dssp             TTSEEEEESSHHHHTTT-T-BT-HHHHHHHHHHHHHCSS--CSTTTSEEHHHHHHHHHHHHHSST--TEEEEEEESSHHH
T ss_pred             CCCCEEEECCCCcccee-cCCCccccchhHHHHhhhccc--ccccceeccchhhhhhhhhhcccc--ccceeeeccCchH
Confidence            35888999986521111 122468999999998875322  222333445667777777765532  4578999999999


Q ss_pred             HHHHHHHHHh-------cCCCCEEEecCCCCcchHHHHHH-cC------------cEEEEeeccCCCC---cccCHHHHH
Q 021547          122 AVEIILTVIT-------RLGAANILLPRPGWPFYESFAKR-NH------------IEVRHFDLLPERG---WEVDLEAVE  178 (311)
Q Consensus       122 a~~~~~~~l~-------~~g~d~Vl~~~p~~~~~~~~~~~-~g------------~~~~~~~~~~~~~---~~~d~~~l~  178 (311)
                      |++.+++...       .+++.+|+....+|.+....... .+            ..+..+|......   ..-..+.++
T Consensus        88 Ave~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  167 (339)
T PF00202_consen   88 AVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALE  167 (339)
T ss_dssp             HHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHH
Confidence            9999888876       24558999999888764322222 11            1234444321000   000011122


Q ss_pred             h----hcCCCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEec
Q 021547          179 A----LADENTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGS  253 (311)
Q Consensus       179 ~----~l~~~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s  253 (311)
                      +    .-.++..++++.......|... +++-+++|.++|++||+++|.||++.++...|+ +.....+.-.++++   +
T Consensus       168 ~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~-~~a~~~~gv~PDiv---~  243 (339)
T PF00202_consen  168 ELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK-FFASEHYGVDPDIV---T  243 (339)
T ss_dssp             HHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS-SSGHHHHTSSSSEE---E
T ss_pred             HHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCC-ccceecccccCccc---c
Confidence            2    2233555556555555566544 666799999999999999999999999866664 33334444444555   4


Q ss_pred             CcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          254 ISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       254 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++|.++ .|+.+|.+++..        ++.+.+... .+.++..++++.+++.+.|+
T Consensus       244 ~gK~l~-gG~p~sav~~~~--------~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~  291 (339)
T PF00202_consen  244 FGKGLG-GGLPISAVLGSE--------EIMEAFQPGSHGSTFGGNPLSCAAALATLE  291 (339)
T ss_dssp             EEGGGG-TTSSEEEEEEEH--------HHHTTSCTTSSTCTTTT-HHHHHHHHHHHH
T ss_pred             cccchh-hhhhcccccccc--------hhhccccccccccccccchHhhhhhhhHHH
Confidence            569965 469999999864        355555333 33567788888888877664

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.30  E-value=4.2e-10  Score=108.97  Aligned_cols=171  Identities=13%  Similarity=0.049  Sum_probs=121.9

Q ss_pred             CCCCCCCc-HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEE
Q 021547           82 CYAPMFGL-PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR  160 (311)
Q Consensus        82 ~Y~~~~g~-~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~  160 (311)
                      +...+.|. .+..+..|+.++       .....++++|+|.++.+++.+++.+| |.||+++.+|.+..+.+...|+.++
T Consensus       189 dLl~~~G~i~eAe~~aA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~G-d~VLvdRN~HKSv~~aLilsga~PV  260 (713)
T PRK15399        189 SLLDHTGPHLEAEEYIARTFG-------AEQSYIVTNGTSTSNKIVGMYAAPAG-STLLIDRNCHKSLAHLLMMSDVVPI  260 (713)
T ss_pred             CCCCCChHHHHHHHHHHHHhC-------CCcEEEEeCChHHHHHHHHHHhcCCC-CEEEeecccHHHHHHHHHHcCCeeE
Confidence            44444454 566677777773       23467889999999999999999999 9999999999999999999999999


Q ss_pred             EeeccCCCCc----ccCH-----HHHHhhcCC-----CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEE-EEecc
Q 021547          161 HFDLLPERGW----EVDL-----EAVEALADE-----NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV-IADEV  225 (311)
Q Consensus       161 ~~~~~~~~~~----~~d~-----~~l~~~l~~-----~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~l-i~D~a  225 (311)
                      ++.... +.+    .++.     +.+++.+.+     +++++++++|+ -.|.+++   ++.|++.|   |+.+ ++|||
T Consensus       261 Yl~P~~-n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd---~~~I~~~~---g~~~ilvDEA  332 (713)
T PRK15399        261 WLKPTR-NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYN---TDWIKQTL---DVPSIHFDSA  332 (713)
T ss_pred             Eecccc-cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeC---HHHHHHHh---CCCEEEEecc
Confidence            987543 222    3444     888887753     23578888885 4899998   66677766   5666 69999


Q ss_pred             ccCC-ccCC-CC-CCccccc-CCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          226 YGHL-AFGS-TP-YIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       226 y~~~-~~~~-~~-~~~~~~~-~~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      |+.+ .|.. .+ ...+... ..+..++.+.|.+|.  ++++.-+.++-
T Consensus       333 hgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKt--L~alTQaS~iH  379 (713)
T PRK15399        333 WVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKM--LAAFSQASLIH  379 (713)
T ss_pred             chhhhhcCcccCCcChhhCCCCCCeeeeeeeehhcc--ccccchheeee
Confidence            9864 3432 11 2223221 123346779999998  57777776553

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.30  E-value=2.4e-10  Score=106.38  Aligned_cols=249  Identities=17%  Similarity=0.072  Sum_probs=148.8

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.++||..|.-... .--.+|.+.+++.++++......+..  -..+.+..+++.+.+..+  ...+.++++++++
T Consensus        36 D~dG~~ylD~~~g~~~~~-lGh~~p~i~~ai~~q~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs  110 (422)
T PRK05630         36 LEDGSTVIDAMSSWWSAA-HGHGHPRLKAAAHKQIDTMSHVMFGG--LTHEPAIKLTRKLLNLTD--NGLDHVFYSDSGS  110 (422)
T ss_pred             ECCCCEEEEcchhHHHhc-CCCCCHHHHHHHHHHHHhCCCcccCC--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcH
Confidence            346899999977622111 12357899999999987532211110  012334445555554322  1236899999999


Q ss_pred             HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHc-Cc-------------EEEEeeccCCCCcccC------
Q 021547          121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRN-HI-------------EVRHFDLLPERGWEVD------  173 (311)
Q Consensus       121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~d------  173 (311)
                      +|++.+++....       +++.+|+.....|.+....+... +.             ....+|.....  ..+      
T Consensus       111 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~  188 (422)
T PRK05630        111 VSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVR--GSSPQEISE  188 (422)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCccc--CCChHHHHH
Confidence            999988887542       23367998888888643322211 10             11222221100  111      


Q ss_pred             -HHHHHhhcCCCccEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547          174 -LEAVEALADENTAAIVIINP-CNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT  250 (311)
Q Consensus       174 -~~~l~~~l~~~~~~i~i~~p-~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  250 (311)
                       .+.+++.+.++..++++... +...|.. .+.+.+++|.++|++||+++|+||++.++...|. ......++-.++++ 
T Consensus       189 ~~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~-~~a~~~~gv~PDi~-  266 (422)
T PRK05630        189 YLRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGE-LFATLAAGVTPDIM-  266 (422)
T ss_pred             HHHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCch-hhHHHhcCCCCCee-
Confidence             23445555556666666653 6667774 4677799999999999999999999987754443 22222233333344 


Q ss_pred             EecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh-------hhccccCCCchhHHHHHhhhh
Q 021547          251 LGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA-------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       251 i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                        +++|.++ .| ..+|+++++.        ++.+.+..       ....++..+|++.+++.+.|+
T Consensus       267 --t~gK~l~-gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~  322 (422)
T PRK05630        267 --CVGKALT-GGFMSFAATLCTD--------KVAQLISTPNGGGALMHGPTFMANPLACAVAHASLE  322 (422)
T ss_pred             --eeechhh-cCccccceeeccH--------HHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHH
Confidence              7899853 46 5889988753        35665532       123456788888887777654

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.30  E-value=4.4e-10  Score=105.72  Aligned_cols=250  Identities=15%  Similarity=0.059  Sum_probs=150.2

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.+|||..|.-.. ..--.+|.+.+++.+++..-..  .....-..+.+..+++.+.+..+  ...+.+++++++++
T Consensus        53 ~dG~~ylD~~~g~~~~-~lGh~~p~v~~Ai~~ql~~l~~--~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse  127 (460)
T PRK06916         53 VNGNEYYDGVSSIWLN-VHGHQVPELDEAIREQLNKIAH--STLLGLANVPSILLAEKLIEVVP--EGLKKVFYSDSGAT  127 (460)
T ss_pred             CCCCEEEEcchhHHHh-hcCCCCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence            3588888987652110 0123578899999999874211  00000112334455555554332  12358999999999


Q ss_pred             HHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCC--Ccc--------
Q 021547          122 AVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPER--GWE--------  171 (311)
Q Consensus       122 a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~--~~~--------  171 (311)
                      |++.+++....       +|+.+|+.....|.+....+.. .+.            ....+|.....  .+.        
T Consensus       128 Ave~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~  207 (460)
T PRK06916        128 AVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVK  207 (460)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHH
Confidence            99998887652       4547899888888775432222 111            11222211000  000        


Q ss_pred             cCHHHHHhhcC---CCccEEEEeC-CCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547          172 VDLEAVEALAD---ENTAAIVIIN-PCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV  246 (311)
Q Consensus       172 ~d~~~l~~~l~---~~~~~i~i~~-p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~  246 (311)
                      .+++.+++.++   ++..++++.. +....|.. .+++.++++.++|++||+++|.||++.++...|.. .....++-.+
T Consensus       208 ~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~-~a~~~~gv~P  286 (460)
T PRK06916        208 KHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKM-FACEHENVTP  286 (460)
T ss_pred             HHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchh-hHHHhcCCCC
Confidence            12455666664   3455556555 36666765 58888999999999999999999999877544532 2223333344


Q ss_pred             CeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547          247 PVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       247 ~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +++   +++|.++ .| +++|.+++.+        ++++.+..        ..+.+++.++++.+++.+.|+
T Consensus       287 Div---~~gK~l~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~  346 (460)
T PRK06916        287 DIM---TAGKGLT-GGYLPIAITVTTD--------EIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLE  346 (460)
T ss_pred             Cee---eeehhhh-cCccccceeeecH--------HHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHH
Confidence            444   6799965 57 5999999854        35555431        123456678888887777654

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.30  E-value=3.1e-10  Score=112.62  Aligned_cols=179  Identities=15%  Similarity=0.119  Sum_probs=127.0

Q ss_pred             CCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-------CCCCEEEecCCCCcchH
Q 021547           80 FNCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR-------LGAANILLPRPGWPFYE  149 (311)
Q Consensus        80 ~~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~  149 (311)
                      ++.|.|   .+|..++...+.+|+.+..|.+  . --+..+|++.+-.+.+.++..       .++++|+++...|....
T Consensus       516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd--~-~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP  592 (939)
T TIGR00461       516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD--A-ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP  592 (939)
T ss_pred             cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC--C-cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH
Confidence            445665   3567777777888887766654  1 223344455555544444432       22368999999997777


Q ss_pred             HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc
Q 021547          150 SFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY  226 (311)
Q Consensus       150 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay  226 (311)
                      ..++..|++++.++.+  .++.+|+++|++.++   +++++|++++|+| +|...+  .+++|+++|+++|.++++|.++
T Consensus       593 asa~~~G~~Vv~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDgAq  667 (939)
T TIGR00461       593 ASAAMAGMQVVPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDGAN  667 (939)
T ss_pred             HHHHHCCCEEEEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEecC
Confidence            7889999999999864  456799999999987   4889999999998 787654  4999999999999999999999


Q ss_pred             cCCccCCCCCCcccccCCCCCeEEEecCcccCCC----CcceeeEEEeeC
Q 021547          227 GHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIV----PGWRFGWLATND  272 (311)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~----~G~r~G~i~~~~  272 (311)
                      ..-..   .......+   +-.|+++|.+|+|+.    .|-.+|.+.+..
T Consensus       668 ~~al~---~l~~Pg~~---GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~  711 (939)
T TIGR00461       668 MNAQV---GLTSPGDL---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKS  711 (939)
T ss_pred             hhhCC---CCCCcccc---CCCEEEecCCccCCCCCCCCCCCeEEEEEhh
Confidence            64111   11111222   234899999997763    356789988853

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PRK06917 hypothetical protein; Provisional

Probab=99.29  E-value=5.1e-10  Score=104.95  Aligned_cols=250  Identities=16%  Similarity=0.094  Sum_probs=149.8

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.+|||..|.-... .--.+|.+.+++.+++..... .+.. .-..+.+..+++.+....+  ...+.+++++++++
T Consensus        28 ~dG~~ylD~~~g~~~~~-lGh~hp~v~~Ai~~ql~~~~~-~~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsE  102 (447)
T PRK06917         28 QNGNKYFDGSSGAVTAG-IGHGVKEIADAIKEQAEEVSF-VYRS-QFTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGSE  102 (447)
T ss_pred             CCCCEEEECchhHHhcc-CCCCCHHHHHHHHHHHhhCcC-cccc-ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCChHH
Confidence            36889999987621111 123579999999999875322 1111 0112445556666655332  12357999999999


Q ss_pred             HHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCC--cc--------
Q 021547          122 AVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERG--WE--------  171 (311)
Q Consensus       122 a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~--~~--------  171 (311)
                      |++.+++....       +|+.+|+.....|.+....+.. .+.            .+..++......  +.        
T Consensus       103 Ave~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  182 (447)
T PRK06917        103 ANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQL  182 (447)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHH
Confidence            99999887632       4447899888888775433222 221            111111100000  00        


Q ss_pred             cCHHHHHhhcC----CCccEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC
Q 021547          172 VDLEAVEALAD----ENTAAIVIINPCN-PCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI  245 (311)
Q Consensus       172 ~d~~~l~~~l~----~~~~~i~i~~p~n-ptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~  245 (311)
                      -+++.+++.++    +++.++++..... ..|. ..+++.+++|.++|++||+++|.||++.++...|..+ ....++-.
T Consensus       183 ~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~-a~~~~gv~  261 (447)
T PRK06917        183 ACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMF-AMEHWGVE  261 (447)
T ss_pred             HHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchh-hHHhcCCC
Confidence            02345566554    2344555554343 3445 5578889999999999999999999998764444322 22233333


Q ss_pred             CCeEEEecCcccCCCCcc-eeeEEEeeCCCCccchhhHHHHHhhh-----hccccCCCchhHHHHHhhhh
Q 021547          246 VPVITLGSISKRWIVPGW-RFGWLATNDPNGVLQKSGIVGSIKAC-----LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       246 ~~~i~i~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++++   +++|.++ .|. ++|.+++..        ++++.+...     .+.+++.++++.+++.+.|+
T Consensus       262 PDi~---~~gK~l~-~G~~Pi~a~~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~  319 (447)
T PRK06917        262 PDIM---TLGKGLG-AGYTPIAATVVSD--------RVMEPILRGSRSIMSGHTLSANPLSAATALAVLE  319 (447)
T ss_pred             CCEE---Eeeehhc-cCCcceEEEEEcH--------HHHHHHhccCcccccccCCCCCHHHHHHHHHHHH
Confidence            3444   7799964 575 899999853        366665421     23456789999888877764

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.29  E-value=7.2e-10  Score=104.38  Aligned_cols=253  Identities=13%  Similarity=0.021  Sum_probs=152.6

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC---CCCCCEEEeC
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK---LSADDIYITL  117 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~---~~~~~v~~t~  117 (311)
                      ..+++.+|||..|--... .--.+|.+.+++.+++..-..  .....-..+.+..+++.+....+..   -..+.|++++
T Consensus        60 D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~l~~--~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~  136 (472)
T PRK08742         60 GHDGRRYLDAVSSWWTNL-FGHAEPRIGAAIAAQAGELEQ--VMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYAD  136 (472)
T ss_pred             eCCCCEEEEcCccHHhcc-CCCCCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeC
Confidence            345889999987721111 123578899999998763211  1010111234556666665533211   1235899999


Q ss_pred             ChHHHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHc-Cc------------EEEEeeccCCC--Cccc---
Q 021547          118 GCMEAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRN-HI------------EVRHFDLLPER--GWEV---  172 (311)
Q Consensus       118 g~~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~--~~~~---  172 (311)
                      +|++|++.+++....       +++.+|+.....|.+....+... +.            .+..++.....  .++.   
T Consensus       137 sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~  216 (472)
T PRK08742        137 NGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAE  216 (472)
T ss_pred             CchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHH
Confidence            999999998887642       33468998888887754333222 11            11222211000  0011   


Q ss_pred             -----CHHHHHhhcC---CCccEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          173 -----DLEAVEALAD---ENTAAIVIIN-PCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       173 -----d~~~l~~~l~---~~~~~i~i~~-p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                           +++.+++.+.   .++.++++.. .....|. ..+++.++++.++|++||+++|.||++.++...|. ......+
T Consensus       217 ~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~-~~a~e~~  295 (472)
T PRK08742        217 DYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGT-LFACEQA  295 (472)
T ss_pred             HHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc-chHHHhc
Confidence                 2455666553   3444555554 2566676 55778899999999999999999999998765554 2333344


Q ss_pred             CCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh-------hhccccCCCchhHHHHHhhhh
Q 021547          243 GSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA-------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +-.++++   .++|.++ .| +++|.+++.+        ++++.+..       ..+.+++.++++.+++.+.|+
T Consensus       296 gv~PDiv---~~gKgl~-gG~~Plaav~~~~--------ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~  358 (472)
T PRK08742        296 GVMPDLL---CLSKGLT-GGFLPLSAVLATQ--------QLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLD  358 (472)
T ss_pred             CCCCCEE---EEccccc-CCCCCcceeeccH--------HHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHH
Confidence            4444556   5699964 47 4899998853        36665532       133467789999888877764

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.28  E-value=5.9e-10  Score=104.95  Aligned_cols=251  Identities=12%  Similarity=0.003  Sum_probs=152.2

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.++||..|.-... .--.+|.+.+++.+++......  ....-..+.+..+++.+....+  ...+.++++++++
T Consensus        43 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~l~~~--~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGs  117 (466)
T PRK07030         43 DFEGKRYLDAVSSWWVNV-FGHANPRINQRIKDQVDQLEHV--ILAGFSHEPVIELSERLVKITP--PGLSRCFYADNGS  117 (466)
T ss_pred             ECCCCEEEEcchhHHhhc-CCCCCHHHHHHHHHHHHhcCCc--cccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcH
Confidence            346889999977631111 1235788999999998743211  0001122445556666654322  1235899999999


Q ss_pred             HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCC--Cccc------
Q 021547          121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPER--GWEV------  172 (311)
Q Consensus       121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~--~~~~------  172 (311)
                      +|++.+++....       +|..+|+.....|.+....+.. .+.            .+..+|.....  ..+.      
T Consensus       118 EAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~  197 (466)
T PRK07030        118 SAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHS  197 (466)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHH
Confidence            999998887632       3436788888888765432222 121            11222211100  0011      


Q ss_pred             --CHHHHHhhcC---CCccEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC
Q 021547          173 --DLEAVEALAD---ENTAAIVIIN-PCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI  245 (311)
Q Consensus       173 --d~~~l~~~l~---~~~~~i~i~~-p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~  245 (311)
                        +++.+++.+.   ++..++++.. .+...|. ..+++.++++.++|++||+++|.||++.++...|. ......++-.
T Consensus       198 ~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~-~~a~~~~gv~  276 (466)
T PRK07030        198 RRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGT-MFACEQAGIR  276 (466)
T ss_pred             HHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcccc-chHHHhcCCC
Confidence              2455666664   3445555554 3555566 45667799999999999999999999988755553 2233344444


Q ss_pred             CCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547          246 VPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       246 ~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++++   .++|.++ .| +++|.+++.+        ++++.+..        ..+.+++.++++.+++.+.|+
T Consensus       277 PDiv---~~gKgl~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~  337 (466)
T PRK07030        277 PDFL---CLSKALT-GGYLPLAAVLTTD--------TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLD  337 (466)
T ss_pred             CCEE---eeehhcc-CCcccceEEEecH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence            4556   5699965 58 5999999853        46666532        233466789999888887764

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.28  E-value=3.1e-10  Score=105.69  Aligned_cols=250  Identities=16%  Similarity=0.096  Sum_probs=149.4

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.++||..|.-... .--.+|.+.+++.+++.........  .-..+.+..+++.+.+..+  ...+.++++++|++
T Consensus        40 ~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsE  114 (428)
T PRK07986         40 ADGRRLVDGMSSWWAAI-HGYNHPQLNAAMKSQIDAMSHVMFG--GITHPPAIELCRKLVAMTP--QPLECVFLADSGSV  114 (428)
T ss_pred             CCCCEEEEcchhHHhhc-CCCCCHHHHHHHHHHHhhcCCcccc--ccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHH
Confidence            36889999987621111 1134689999999998743211110  0122345556666655433  12368999999999


Q ss_pred             HHHHHHHHHhc------CCCCEEEecCCCCcchHHHHHHc-Cc-------------EEEEeeccCCC---Cc-ccCHHHH
Q 021547          122 AVEIILTVITR------LGAANILLPRPGWPFYESFAKRN-HI-------------EVRHFDLLPER---GW-EVDLEAV  177 (311)
Q Consensus       122 a~~~~~~~l~~------~g~d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~---~~-~~d~~~l  177 (311)
                      |++.+++....      .|+.+|+....+|.+....+... +.             .+..++.....   .+ .-|++.+
T Consensus       115 Ave~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l  194 (428)
T PRK07986        115 AVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPF  194 (428)
T ss_pred             HHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHH
Confidence            99998887643      34478998888887643222211 11             11122211000   00 1245667


Q ss_pred             HhhcC---CCccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEe
Q 021547          178 EALAD---ENTAAIVIINP-CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLG  252 (311)
Q Consensus       178 ~~~l~---~~~~~i~i~~p-~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~  252 (311)
                      ++.++   ++..++++... ....|. ..+++.+++|.++|++||+++|+||++.++...|..+ ....++-.++++   
T Consensus       195 ~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~f-a~~~~gv~PDi~---  270 (428)
T PRK07986        195 ARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLF-ACEHAGIAPDIL---  270 (428)
T ss_pred             HHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCee-eecccCCCCCEE---
Confidence            77664   23444555542 555565 4466889999999999999999999997764444322 222333233334   


Q ss_pred             cCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh------hccccCCCchhHHHHHhhhh
Q 021547          253 SISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC------LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       253 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .++|.++ .| +.+|.++++.        ++++.+...      .+.+++.+|++.+++.+.|+
T Consensus       271 t~gK~l~-gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~  325 (428)
T PRK07986        271 CLGKALT-GGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAVANASLS  325 (428)
T ss_pred             Eechhhh-CCcccCcchhchH--------HHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence            5899975 56 5888887743        466666541      33456678888888777654

>PRK07036 hypothetical protein; Provisional

Probab=99.28  E-value=7.3e-10  Score=104.37  Aligned_cols=251  Identities=17%  Similarity=0.129  Sum_probs=149.7

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      ..+++.+|||..|.-... .--.+|.+.+++.+++..... ..+.  ....+.+..+++.+....+  -..+.|++++++
T Consensus        47 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sG  121 (466)
T PRK07036         47 DADGRRYLDGIGGMWCVN-VGYGREEMADAIADQARRLPYYTPFG--DMTNAPAAELAAKLAELAP--GDLNHVFLTTGG  121 (466)
T ss_pred             ECCCCEEEECcccHHhhc-CCCCCHHHHHHHHHHHHhCccccccc--ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCc
Confidence            346889999987622111 123578999999998874211 1111  0123445556666655332  124689999999


Q ss_pred             HHHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHc-Cc------------EEEEeeccCC--CCcccC----
Q 021547          120 MEAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRN-HI------------EVRHFDLLPE--RGWEVD----  173 (311)
Q Consensus       120 ~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~--~~~~~d----  173 (311)
                      ++|++.+++....       +++.+|+.....|.+....+... +.            .+..++....  ...+..    
T Consensus       122 seAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  201 (466)
T PRK07036        122 STAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAF  201 (466)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHH
Confidence            9999998887531       23368888888887654332221 11            1222221110  001111    


Q ss_pred             ----HHHHHhhcC----CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccc-ccC
Q 021547          174 ----LEAVEALAD----ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG-VFG  243 (311)
Q Consensus       174 ----~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~-~~~  243 (311)
                          .+.+++.+.    ++..++++.......|.. .+++-+++|.++|++||+++|.||++.++...|+.+ ... .++
T Consensus       202 ~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~~g  280 (466)
T PRK07036        202 CDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFF-ASEAVFG  280 (466)
T ss_pred             HHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhh-hhhhhcC
Confidence                233444442    345555655556666774 567779999999999999999999998875444322 222 233


Q ss_pred             CCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh-------h-hccccCCCchhHHHHHhhhh
Q 021547          244 SIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA-------C-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      -.++++   +++|.++ .| +++|.+++..        ++++.+..       + .+.+++.+|++.+++.+.|+
T Consensus       281 v~PDiv---t~gK~l~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le  343 (466)
T PRK07036        281 IQPDII---TFAKGLT-SGYQPLGAVIISE--------RLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIE  343 (466)
T ss_pred             CCCCEE---EEccccc-cCccccEEEEEcH--------HHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHH
Confidence            333444   7799964 57 5899999853        36666542       1 22366789999888887764

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.27  E-value=8e-11  Score=113.90  Aligned_cols=171  Identities=15%  Similarity=0.091  Sum_probs=124.6

Q ss_pred             CCCCCCCc-HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEE
Q 021547           82 CYAPMFGL-PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR  160 (311)
Q Consensus        82 ~Y~~~~g~-~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~  160 (311)
                      +...+.|. .+..+..|+.++       .....++++|+|.++.+++.+++.+| |.||+++.+|.+..+.+...|+.++
T Consensus       189 dLl~~~G~i~eAe~~AA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~G-d~VLvdRN~HKSv~haLilsga~PV  260 (714)
T PRK15400        189 SLLDHSGPHKEAEEYIARVFN-------ADRSYMVTNGTSTANKIVGMYSAPAG-STVLIDRNCHKSLTHLMMMSDVTPI  260 (714)
T ss_pred             CCCCCChHHHHHHHHHHHHhC-------CCcEEEEeCchHHHHHHHHHHhcCCC-CEEEeecccHHHHHHHHHHcCCeEE
Confidence            44444454 466667777663       23467889999999999999999999 9999999999999999999999999


Q ss_pred             EeeccCCCCc----ccC-----HHHHHhhcCC--Ccc---EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc
Q 021547          161 HFDLLPERGW----EVD-----LEAVEALADE--NTA---AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY  226 (311)
Q Consensus       161 ~~~~~~~~~~----~~d-----~~~l~~~l~~--~~~---~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay  226 (311)
                      ++.... +.+    .++     .+.+++.+..  +.+   ++++++|+ -.|.+++   ++.|+++|+.++  |++||||
T Consensus       261 Yl~P~r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd---~~~I~~~~~~~~--ilvDEAw  333 (714)
T PRK15400        261 YFRPTR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYN---TDFIKKTLDVKS--IHFDSAW  333 (714)
T ss_pred             Eecccc-cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecC---HHHHHHHhCCCC--EEEEccc
Confidence            987643 222    334     7888887754  233   68888885 4889998   788888888777  7999999


Q ss_pred             cCC-ccCCC-C-CCcccccC-CCCCeEEEecCcccCCCCcceeeEEE
Q 021547          227 GHL-AFGST-P-YIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       227 ~~~-~~~~~-~-~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      +.+ .|... + ..++.... +++.++++.|.+|.  ++|+.-+.++
T Consensus       334 gah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKt--L~alTQaS~L  378 (714)
T PRK15400        334 VPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKL--LAAFSQASMI  378 (714)
T ss_pred             hhhhccCcccCCcChhhcCCCCCCceEEEEchhhc--ccchhHHhHH
Confidence            864 44321 1 22232221 12347999999998  5777766654

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.27  E-value=7.8e-10  Score=104.08  Aligned_cols=251  Identities=15%  Similarity=0.111  Sum_probs=148.6

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEe-CCh
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYIT-LGC  119 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t-~g~  119 (311)
                      .+++.++||..|--... .--.+|.+.+++.+++.....  +....-..+.+..+++.+....+..... +.++++ ++|
T Consensus        60 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SG  136 (464)
T PRK06938         60 VEGRQFIDCLAGAGTLA-LGHNHPVVIEAIQQVLADELP--LHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTG  136 (464)
T ss_pred             CCCCEEEEccCCccccc-cCCCCHHHHHHHHHHHHhhhc--ccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCc
Confidence            35888999976632211 123578999999998863211  1110111234444555554432212111 356564 788


Q ss_pred             HHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCC--cc--------cCHH
Q 021547          120 MEAVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERG--WE--------VDLE  175 (311)
Q Consensus       120 ~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~--~~--------~d~~  175 (311)
                      ++|++.+++.... .|+.+|+.....|.+....+.. .+.            ++..++......  +.        .+++
T Consensus       137 SEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  216 (464)
T PRK06938        137 TDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLH  216 (464)
T ss_pred             HHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHH
Confidence            9999998887643 4547888888888765432222 110            122232211100  00        1256


Q ss_pred             HHHhhcCC------CccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547          176 AVEALADE------NTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV  248 (311)
Q Consensus       176 ~l~~~l~~------~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~  248 (311)
                      .+++.+.+      ++.++++.......|.+ .+++-++++.++|++||+++|.||+..++...|. ......++-.+++
T Consensus       217 ~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~-~~a~e~~gv~PDi  295 (464)
T PRK06938        217 YLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGK-MFAFEHAGIIPDV  295 (464)
T ss_pred             HHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcH-HHHHHhcCCCCCE
Confidence            67776642      24445554445555765 4688899999999999999999999998755553 2233334444455


Q ss_pred             EEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh-hhccccCCCchhHHHHHhhhh
Q 021547          249 ITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       249 i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +   .++|.++ .|+++|.+++.+.        + +.+.. ....+++.++++.+++.+.|+
T Consensus       296 v---~~gKglg-gG~PlsAv~~~~~--------~-~~~~~~~~~~T~~gnpla~Aaa~a~L~  344 (464)
T PRK06938        296 V---VLSKAIG-GSLPLAVVVYREW--------L-DTWQPGAHAGTFRGNQMAMAAGSATLR  344 (464)
T ss_pred             E---Eeecccc-CCCceEEEeehhH--------h-hccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            6   5699975 5899999998531        2 33322 234567889999888887764

>PRK07483 hypothetical protein; Provisional

Probab=99.27  E-value=4.7e-10  Score=105.05  Aligned_cols=250  Identities=17%  Similarity=0.131  Sum_probs=150.4

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.++||..|.-.. ..--.+|.+.+++.+++.....  +.......+....+++.+....+.  ..+.+++++++++
T Consensus        27 ~dG~~ylD~~~g~~~~-~lGh~~p~v~~av~~ql~~~~~--~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGsE  101 (443)
T PRK07483         27 ATGKRYLDASGGAAVS-CLGHSHPRVIAAIHAQIDRLAY--AHTSFFTTEPAEALADRLVAAAPA--GLEHVYFVSGGSE  101 (443)
T ss_pred             CCCCEEEEcCccHhhh-ccCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCC--CCCEEEEcCCcHH
Confidence            4688999998772211 1123678899999999874321  111111124455566666553321  2368999999999


Q ss_pred             HHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccCCCCc---ccC-----
Q 021547          122 AVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLPERGW---EVD-----  173 (311)
Q Consensus       122 a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~~---~~d-----  173 (311)
                      |++.+++....       +++.+|+.....|.+....+.. .+.            .+..++.......   ..+     
T Consensus       102 Ave~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (443)
T PRK07483        102 AVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYG  181 (443)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHH
Confidence            99988886642       3446788888888765322221 111            1112221100000   000     


Q ss_pred             ---HHHHHhhcC----CCccEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547          174 ---LEAVEALAD----ENTAAIVIINPCN-PCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS  244 (311)
Q Consensus       174 ---~~~l~~~l~----~~~~~i~i~~p~n-ptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~  244 (311)
                         ++.+++.+.    ++..++++...+. ..|. ..+++.++++.++|++||+++|.||++.++...|. ......++-
T Consensus       182 ~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~-~~a~~~~gv  260 (443)
T PRK07483        182 QRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGT-LFACEEDGV  260 (443)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcH-HHHHhhcCC
Confidence               245565442    3445555554443 3454 55777899999999999999999999998755553 223333444


Q ss_pred             CCCeEEEecCcccCCCCcc-eeeEEEeeCCCCccchhhHHHHHhhh-----hccccCCCchhHHHHHhhhh
Q 021547          245 IVPVITLGSISKRWIVPGW-RFGWLATNDPNGVLQKSGIVGSIKAC-----LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       245 ~~~~i~i~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .++++   +++|.+ ..|. ++|.+++.+        ++.+.+...     .+.+++.++++.+++.+.|+
T Consensus       261 ~PDiv---~~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~  319 (443)
T PRK07483        261 APDLV---TIAKGL-GAGYQPIGAVLASD--------RIYDAIADGSGFFQHGHTYLGHATACAAALAVQR  319 (443)
T ss_pred             CCCee---eehhhh-ccCccccEEEEEcH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence            44555   669996 4575 999999854        366665421     33467789999888877764

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.27  E-value=6.9e-10  Score=98.33  Aligned_cols=248  Identities=16%  Similarity=0.094  Sum_probs=164.3

Q ss_pred             hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHH
Q 021547           24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS------SMFNCYAPMFGLPLARRAVA   97 (311)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~------~~~~~Y~~~~g~~~lr~~ia   97 (311)
                      -+..|++++..-..+     .+..|+|=--.      --.++.+++++...+.+      +.-..|+...-++++++...
T Consensus        10 ~d~~i~~~i~~e~~r-----q~~~ieLIASE------N~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~lai   78 (413)
T COG0112          10 YDPEIFEAIQQELER-----QREHIELIASE------NFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAI   78 (413)
T ss_pred             cCHHHHHHHHHHHHH-----Hhhceeeeecc------ccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHH
Confidence            345677777643333     34556664443      23578888988777642      11223555666677777777


Q ss_pred             HHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH---HHHcC--cEEEEeeccCCCCccc
Q 021547           98 EYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF---AKRNH--IEVRHFDLLPERGWEV  172 (311)
Q Consensus        98 ~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~---~~~~g--~~~~~~~~~~~~~~~~  172 (311)
                      +..++.||.+  .-||...+| +.|..+++.+|++|| |+|+..+-.+.++...   ....|  ++.+.+++++ ++..+
T Consensus        79 erak~LFga~--~anVQPhSG-s~AN~av~~All~pG-Dtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~-et~~I  153 (413)
T COG0112          79 ERAKKLFGAE--YANVQPHSG-SQANQAVYLALLQPG-DTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDP-ETGLI  153 (413)
T ss_pred             HHHHHHhCCC--ccccCCCCc-hHHHHHHHHHHcCCC-CeEecccCCCCCcccCCCCCCccceeEEeEeccccc-ccCcc
Confidence            7777777643  346666666 568999999999999 9999876665543221   11222  4666676644 45689


Q ss_pred             CHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCCCCCeEE
Q 021547          173 DLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGSIVPVIT  250 (311)
Q Consensus       173 d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~  250 (311)
                      |.|++++... .++|+|+.-...+|-  .++   ++++.++|.+-|.++++|.+|- ++.-.|.-+.|+..-     .|+
T Consensus       154 DyD~~~k~a~e~kPK~ii~G~SaY~r--~id---~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~A-----dvV  223 (413)
T COG0112         154 DYDEVEKLAKEVKPKLIIAGGSAYSR--PID---FKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHA-----DVV  223 (413)
T ss_pred             CHHHHHHHHHHhCCCEEEECcccccc--ccC---HHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCcc-----ceE
Confidence            9999999654 578887766555544  334   8999999999999999999996 466666545555442     299


Q ss_pred             EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHh
Q 021547          251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMF  306 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~  306 (311)
                      .+|.+|+  ++|-|-|.|++.+.       ++.+++........-.+++.-.+++.
T Consensus       224 TtTTHKT--lrGPrGG~Il~~~e-------el~kkin~aVFPg~qggpl~HviAak  270 (413)
T COG0112         224 TTTTHKT--LRGPRGGIILTNDE-------ELAKKINSAVFPGLQGGPLMHVIAAK  270 (413)
T ss_pred             eCCcccC--CCCCCceEEEeccH-------HHHHHhhhhcCCccCCChHHHHHHHH
Confidence            9999998  57888898887652       36777766544333444444444433

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.27  E-value=5e-10  Score=112.69  Aligned_cols=170  Identities=20%  Similarity=0.171  Sum_probs=118.9

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC-ChHHHHHHHHHHHh----cCC---CCEEEecCCCCcchHHHHHHcCcE
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITL-GCMEAVEIILTVIT----RLG---AANILLPRPGWPFYESFAKRNHIE  158 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~-g~~~a~~~~~~~l~----~~g---~d~Vl~~~p~~~~~~~~~~~~g~~  158 (311)
                      +|..++...+.+|+.+..|.    +++.+.. |++++..+.+.++.    ++|   .++|+++...|......+...|++
T Consensus       538 qG~l~~i~e~q~~l~eltG~----d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~  613 (954)
T PRK05367        538 AGYRELIDQLEAWLAEITGY----DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMK  613 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHCC----CCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCE
Confidence            45667777777888876664    3565554 55555544443333    445   136999999998888888999999


Q ss_pred             EEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547          159 VRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP  235 (311)
Q Consensus       159 ~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~  235 (311)
                      ++.++.+  .++.+|+++|++.+++   ++.++++++|++-.+...+   +++|+++|+++|+++++|.++......   
T Consensus       614 vv~v~~d--~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~al~~---  685 (954)
T PRK05367        614 VVVVACD--ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLDGANMNAQVG---  685 (954)
T ss_pred             EEEECCC--CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEECcChhhccC---
Confidence            9999875  3457999999998865   4667778888765444456   999999999999999999999642211   


Q ss_pred             CCcccccCCCCCeEEEecCcccCCCC----cceeeEEEee
Q 021547          236 YIPMGVFGSIVPVITLGSISKRWIVP----GWRFGWLATN  271 (311)
Q Consensus       236 ~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~i~~~  271 (311)
                      ......+   +-.++..|++|+|+.|    |-.+|.+.+.
T Consensus       686 l~~pg~~---GADi~~~s~HK~f~~P~G~GGPg~G~l~vr  722 (954)
T PRK05367        686 LARPGDI---GADVSHLNLHKTFCIPHGGGGPGVGPIGVK  722 (954)
T ss_pred             CCChhhc---CCCEEEecCcccCCCCcCCCCCceEEEeec
Confidence            1111122   2238889999997643    4557887764

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.27  E-value=4.5e-10  Score=104.82  Aligned_cols=246  Identities=16%  Similarity=0.122  Sum_probs=143.9

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN--CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ++++++||..|.-....+ -.+|.+.+++.+++......  .+...    +....+++.+.+..+  -.-+.++++++|+
T Consensus        43 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~~~~~~~~~~~~~~~~----~~~~~la~~l~~~~~--~~~~~v~f~~sGs  115 (427)
T TIGR00508        43 DGRRLIDGMSSWWAAIHG-YNHPRLNAAAQKQIDKMSHVMFGGFTH----KPAIELCQKLVKMTP--NALDCVFLADSGS  115 (427)
T ss_pred             CCCEEEEccchHHHhcCC-CCCHHHHHHHHHHHHhcCCccccccCC----HHHHHHHHHHHhhCC--CCCCEEEEeCCcH
Confidence            588999998763221112 46789999999988743211  11111    223334444443322  1236899999999


Q ss_pred             HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHH-cCcE-------------EEEeeccCCCCcc-----cCH
Q 021547          121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKR-NHIE-------------VRHFDLLPERGWE-----VDL  174 (311)
Q Consensus       121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~-~g~~-------------~~~~~~~~~~~~~-----~d~  174 (311)
                      +|++.+++....       +|..+||....+|.+....+.. .+..             ...++. +...+.     -++
T Consensus       116 eA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~  194 (427)
T TIGR00508       116 VAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA-PQNRFDEEWNEEAI  194 (427)
T ss_pred             HHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC-CCccccchhHHHHH
Confidence            999988876542       2446899888888764322222 1211             011111 101110     135


Q ss_pred             HHHHhhcC---CCccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeE
Q 021547          175 EAVEALAD---ENTAAIVIINP-CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVI  249 (311)
Q Consensus       175 ~~l~~~l~---~~~~~i~i~~p-~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i  249 (311)
                      +++++.+.   .+..++++... +...|. ..+.+.+++|.++|++||+++|+||++.++...|..+ ....++-.++++
T Consensus       195 ~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~-~~~~~~v~pDi~  273 (427)
T TIGR00508       195 TPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLF-ACEHAGVVPDIL  273 (427)
T ss_pred             HHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccc-hhhhcCCCCCEE
Confidence            56666653   23444454443 555565 4578899999999999999999999997765555432 222232233333


Q ss_pred             EEecCcccCCCCcc-eeeEEEeeCCCCccchhhHHHHHhhh------hccccCCCchhHHHHHhhhh
Q 021547          250 TLGSISKRWIVPGW-RFGWLATNDPNGVLQKSGIVGSIKAC------LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       250 ~i~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l~  309 (311)
                         +++|.+ ..|+ .++.++...        ++++.+...      ...++..++++.+++.+.|+
T Consensus       274 ---~~gK~l-~gG~~p~~a~~~~~--------~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~  328 (427)
T TIGR00508       274 ---CVGKAL-TGGYMTLSATVTTD--------KVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLA  328 (427)
T ss_pred             ---Eechhh-hcCcccceEEEEcH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence               379997 4574 677777642        366666531      22345568888888777664

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.25  E-value=4.8e-10  Score=104.52  Aligned_cols=251  Identities=16%  Similarity=0.119  Sum_probs=146.0

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.++||..|--... .--.+|.+.+++.+++........  ..-..+.+..+++.+....+  ...+.++++++++
T Consensus        40 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGs  114 (429)
T PRK06173         40 LKDGRRLIDGMSSWWAAL-HGYNHPRLNAAATNQLAKMSHIMF--GGFTHEPAVELAQKLLEILP--PSLNKIFFADSGS  114 (429)
T ss_pred             cCCCCEEEEccchHHhcc-CCCCCHHHHHHHHHHHHhcCCccc--cccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCch
Confidence            346889999976621111 113568999999998874321111  00112333445555544322  1346899999999


Q ss_pred             HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHc-C----c---------EEEEeeccCCC---Cc-ccCHH
Q 021547          121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRN-H----I---------EVRHFDLLPER---GW-EVDLE  175 (311)
Q Consensus       121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~-g----~---------~~~~~~~~~~~---~~-~~d~~  175 (311)
                      +|++.+++....       +|+.+|+.....|.+....+... +    .         ....++.....   .+ .-+++
T Consensus       115 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~  194 (429)
T PRK06173        115 VAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIE  194 (429)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHH
Confidence            999998887642       34468888888887742211111 1    0         01122211000   00 01355


Q ss_pred             HHHhhcC---CCccEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547          176 AVEALAD---ENTAAIVIINP-CNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT  250 (311)
Q Consensus       176 ~l~~~l~---~~~~~i~i~~p-~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  250 (311)
                      .+++.+.   ++..++++... +...|.. .+++.+++|.++|++||+++|+||++.++...|..+ ....++-.++++ 
T Consensus       195 ~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~PDiv-  272 (429)
T PRK06173        195 PLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLF-ALEHAGVVPDIM-  272 (429)
T ss_pred             HHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcch-HHHhcCCCCCEE-
Confidence            5666664   34555555553 6666775 677889999999999999999999997764445322 122233233333 


Q ss_pred             EecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh-----h-hccccCCCchhHHHHHhhhh
Q 021547          251 LGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA-----C-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       251 i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                        +++|.++ .| +.++.+++..        ++++.+..     + .+.++..++++.+++.+.|+
T Consensus       273 --~~gK~l~-gG~~p~~a~~~~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~  327 (429)
T PRK06173        273 --CIGKALT-GGYLTLSATITTE--------AIAQTICSGEAKCFMHGPTFMANPLACAIAAESIR  327 (429)
T ss_pred             --Eeehhhh-CCccccceEEecH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence              4899974 56 4788887743        35665532     1 23345678888887776654

>PRK06148 hypothetical protein; Provisional

Probab=99.25  E-value=5.9e-10  Score=113.86  Aligned_cols=245  Identities=16%  Similarity=0.080  Sum_probs=149.9

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN-CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      +++.++||..|...   .--.+|.+.+++.+++.....+ .|     ..+.+..+++.+.+..+.  ..+.++++++|++
T Consensus       622 dG~~ylD~~~g~~~---lGH~hp~v~~Ai~~q~~~l~~~~~~-----~~~~~~~lAe~L~~~~p~--~~~~v~f~nSGsE  691 (1013)
T PRK06148        622 RGRAYLDCFNNVCH---VGHAHPRVVAAAARQAARLNTNTRY-----LHDAIVAYAERLTATLPD--GLTVAFFVNSGSE  691 (1013)
T ss_pred             CCCEEEEcccChhh---cCCCCHHHHHHHHHHHhhcCCcCCc-----CCHHHHHHHHHHHHhCCC--CcCEEEEeCCcHH
Confidence            48888999776311   1236899999999998743111 22     223455566666554321  2367999999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cCc------------EEEEeeccC--CCCccc-C-------HHHH
Q 021547          122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NHI------------EVRHFDLLP--ERGWEV-D-------LEAV  177 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~--~~~~~~-d-------~~~l  177 (311)
                      |++.+++.... .|+.+|+....+|.+....+.. .+.            .+..++...  ...+.. +       .+.+
T Consensus       692 A~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l  771 (1013)
T PRK06148        692 ANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESV  771 (1013)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHH
Confidence            99998887753 4546888888888765322111 110            111111100  001110 1       1234


Q ss_pred             HhhcC------CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547          178 EALAD------ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT  250 (311)
Q Consensus       178 ~~~l~------~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  250 (311)
                      ++.+.      .++.++++.......|. ..+++.++++.++|++||+++|.||++.++...|.....+..++-.++++ 
T Consensus       772 ~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDiv-  850 (1013)
T PRK06148        772 AEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV-  850 (1013)
T ss_pred             HHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCccee-
Confidence            44332      23445555544444455 55777899999999999999999999988755554333344444344444 


Q ss_pred             EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh--hccccCCCchhHHHHHhhhh
Q 021547          251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC--LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~q~~~~~~l~  309 (311)
                        +++|.++ .|.++|.+++..        ++++.+...  ...+++.++++.+++.+.|+
T Consensus       851 --t~gK~lg-gG~Plgav~~~~--------ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~  900 (1013)
T PRK06148        851 --TMGKPIG-NGHPMGAVVTTR--------EIADSFDNGMEYFNTFGGNPVSCAIGLAVLD  900 (1013)
T ss_pred             --eeccccc-CCcceEEEEEcH--------HHHhhccCCCccccCCCCCHHHHHHHHHHHH
Confidence              7799965 589999999853        466665432  23467889999888887664

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.25  E-value=3e-10  Score=103.18  Aligned_cols=186  Identities=12%  Similarity=-0.010  Sum_probs=125.7

Q ss_pred             CcHHHHHHHHHHHhcC---CCCCCCCCC---CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC-hHHHHHHHHHHHhcCCC
Q 021547           63 TAAVAEDAIVDSVRSS---MFNCYAPMF---GLPLARRAVAEYLNRDLPYKLSADDIYITLG-CMEAVEIILTVITRLGA  135 (311)
Q Consensus        63 ~~~~~~~a~~~~~~~~---~~~~Y~~~~---g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g-~~~a~~~~~~~l~~~g~  135 (311)
                      .|..+++++.+.+...   ....|....   ...++-+.+.+.+++.++.+ ...+|++++| +|.++++++..+..+| 
T Consensus         3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~~~~-   80 (349)
T TIGR01364         3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLLAEG-   80 (349)
T ss_pred             CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcCCCC-
Confidence            4678888888887631   111222211   12245455555555555531 2346877766 9999999999999899 


Q ss_pred             CEEEecCCCCcc--hHHHHHHcCcEEEEeeccCC--CCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHH
Q 021547          136 ANILLPRPGWPF--YESFAKRNHIEVRHFDLLPE--RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE  211 (311)
Q Consensus       136 d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~  211 (311)
                      +++++...+..+  +...++..|. +..+...+.  .+..+++++++  ++++++.|.+++..+.||...+        +
T Consensus        81 ~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~--------~  149 (349)
T TIGR01364        81 KVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR--------E  149 (349)
T ss_pred             CeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc--------e
Confidence            998887766654  4578888998 776664322  12234555555  3468899999999999999775        5


Q ss_pred             HHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       212 l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      +++.+++++++|.+.+.    |..+..+..++     +++.|..|.+|.||  +|.++++.
T Consensus       150 l~~~~~~l~iVDavss~----g~~~id~~~~d-----~~~~ssqK~lgP~G--lg~l~~s~  199 (349)
T TIGR01364       150 LPDVKNAPLVADMSSNI----LSRPIDVSKFG-----LIYAGAQKNIGPAG--LTVVIVRK  199 (349)
T ss_pred             ecccCCCeEEEEccccc----cCccCCHHHcc-----EEEEecccccCCCc--eEEEEECH
Confidence            66678999999999986    22333444332     99999999998777  67766654

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.24  E-value=2.3e-10  Score=106.77  Aligned_cols=188  Identities=15%  Similarity=0.071  Sum_probs=136.2

Q ss_pred             HHHHHHHHHHhcC-------CCCCCCCCCCc-HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCE
Q 021547           66 VAEDAIVDSVRSS-------MFNCYAPMFGL-PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAAN  137 (311)
Q Consensus        66 ~~~~a~~~~~~~~-------~~~~Y~~~~g~-~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~  137 (311)
                      .+.+.+.+.+.+.       .+.+-.++.|. .+..+..|+.++.       ....++++|++.++..++.+++.+| |.
T Consensus        41 ~f~~f~Gen~fr~D~~~~~~~Ld~Ll~p~G~i~eAqe~aA~~fgA-------d~tyFvvNGTS~ank~vi~a~~~~G-D~  112 (557)
T COG1982          41 EFYDFFGENLFRADVSEADGELDSLLDPEGPIKEAQELAARVFGA-------DHTYFVVNGTSTANKAVINAVLTPG-DK  112 (557)
T ss_pred             HHHHHhhhhhhhcccccccCccccccCCCccHHHHHHHHHHHhCC-------CceEEEECCccHHHHHHHHhhcCCC-CE
Confidence            5556665554321       12233344444 5667777777732       3368899999999999999999999 99


Q ss_pred             EEecCCCCcchHHHHHHcCcEEEEeeccCCCC----cccCHHHHHhhcCC--Cc-cEEEEeCCCCCCccCCCHHHHHHHH
Q 021547          138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERG----WEVDLEAVEALADE--NT-AAIVIINPCNPCGNVLTYQHLQKIA  210 (311)
Q Consensus       138 Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~d~~~l~~~l~~--~~-~~i~i~~p~nptG~~~~~~~l~~l~  210 (311)
                      ||+++++|.+..+.+...|+.++++.......    .+++.+.+++.+.+  .. +++++++|++ .|..++   ++++.
T Consensus       113 VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~  188 (557)
T COG1982         113 VLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIV  188 (557)
T ss_pred             EEecCCccHHHHHHHHHcCCceEEecCCCCccccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHH
Confidence            99999999999999999999999987654442    46789999886543  34 7788888765 788888   89999


Q ss_pred             HHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          211 ETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       211 ~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      ++++++++|+.+|+++....-.. +..+-.. ...+.++.+.|.+|.  ++++..+.++
T Consensus       189 ~~~~~~~a~v~~deah~~~~~~~-~~l~~~~-~~~~~~~~tqS~HK~--l~alSQaS~i  243 (557)
T COG1982         189 ELLHHYGAWVLYDEAHPAHFDFS-PMLPESA-LNGGADFVTQSTHKL--LAALSQASMI  243 (557)
T ss_pred             HHHhhcCceEEhhhcCccccccc-ccCcchh-hhcCceEEEechhhh--hhhhhhhHHH
Confidence            99999999999999998643111 1111111 124568999999998  4556555544

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.23  E-value=2.1e-10  Score=104.44  Aligned_cols=240  Identities=17%  Similarity=0.109  Sum_probs=138.9

Q ss_pred             hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCcHHHHHHHHH
Q 021547           25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN------CYAPMFGLPLARRAVAE   98 (311)
Q Consensus        25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~   98 (311)
                      ..+|.++++.-.++     .+.-|+|--..      -..+|.+++++...+..-...      .|....-+.++++...+
T Consensus         5 d~ei~~li~~e~~r-----q~~~l~LiaSE------N~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~   73 (399)
T PF00464_consen    5 DPEIYELIEKEEER-----QRSTLNLIASE------NYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIE   73 (399)
T ss_dssp             THHHHHHHHHHHHH-----HHHSEE-CTT-----------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH-----HhcCccccCcc------cccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHH
Confidence            45566666543333     35667776654      235677777776655421111      13333344555555555


Q ss_pred             HHhhcCCCCCCCCCEEE---eCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH---HHH-------HHcCcEEEEeecc
Q 021547           99 YLNRDLPYKLSADDIYI---TLGCMEAVEIILTVITRLGAANILLPRPGWPFYE---SFA-------KRNHIEVRHFDLL  165 (311)
Q Consensus        99 ~l~~~~g~~~~~~~v~~---t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~---~~~-------~~~g~~~~~~~~~  165 (311)
                      ..++.|+.  ++++..+   ..+++.|+.+++.+|++|| |+|+..+..+.+..   ...       .-...+.+.++++
T Consensus        74 ra~~lF~~--~~~~w~anvqp~SGs~An~av~~aLl~pG-D~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d  150 (399)
T PF00464_consen   74 RAKELFGA--EPKEWYANVQPHSGSQANLAVYMALLKPG-DTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVD  150 (399)
T ss_dssp             HHHHHHT---STTTEEEE---SSHHHHHHHHHHHHT-TT--EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-
T ss_pred             HHHHHhCC--CcccceEEeecCCchHHHHHHHHHHHhhc-CcEEecChhhcccccccccccccccccccceEEEEeeeee
Confidence            55555553  3333333   4677889999999999999 99998776654332   111       2234577788775


Q ss_pred             CCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccC
Q 021547          166 PERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFG  243 (311)
Q Consensus       166 ~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~  243 (311)
                      + ++..+|.+++++.... ++++|++....+|-  .+   +++++.++|++.|.+|++|.+|- ++.-.|.-+.|+..- 
T Consensus       151 ~-~~~~ID~d~l~~~a~~~kPklIi~G~S~y~~--~~---d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~A-  223 (399)
T PF00464_consen  151 P-DTGLIDYDELEKLAKEHKPKLIICGASSYPR--PI---DFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYA-  223 (399)
T ss_dssp             T-TTSSB-HHHHHHHHHHH--SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTS-
T ss_pred             c-CCCeECHHHHHHHHhhcCCCEEEECchhccC--cc---CHHHHHHHHHhcCcEEEecccccccceehheecCccccc-
Confidence            4 4678999999997654 78888877666554  22   48999999999999999999996 466566555565432 


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEee------CCCCccchhhHHHHHhhhhc
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATN------DPNGVLQKSGIVGSIKACLG  291 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~------~~~~~~~~~~~~~~~~~~~~  291 (311)
                          .|+.+|.+|+  ++|-|-|.|++.      +......++++.+++.....
T Consensus       224 ----Dvvt~sThKt--l~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avf  271 (399)
T PF00464_consen  224 ----DVVTGSTHKT--LRGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVF  271 (399)
T ss_dssp             ----SEEEEESSGG--G-SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHT
T ss_pred             ----eEEEeecccc--ccccCceEEEEcCCccccCCcccccHHHHHHHhccccC
Confidence                1999999998  588888998886      11100002457777776644

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.22  E-value=4.9e-10  Score=102.24  Aligned_cols=189  Identities=10%  Similarity=-0.005  Sum_probs=122.7

Q ss_pred             CCCcHHHHHHHHHHHhcC---CCCCCC---CCCCcHHHHHHHHHHHhhcCCCCCCCCCEE-EeCChHHHHHHHHHHHhcC
Q 021547           61 FRTAAVAEDAIVDSVRSS---MFNCYA---PMFGLPLARRAVAEYLNRDLPYKLSADDIY-ITLGCMEAVEIILTVITRL  133 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~---~~~~Y~---~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~-~t~g~~~a~~~~~~~l~~~  133 (311)
                      ...|+.++++|...+...   ....+.   ......++-+.+.+.+++.++.+ +..+++ ++++++.++++++..++.+
T Consensus        12 ~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgt~~~Ea~~~nl~~~   90 (360)
T PRK05355         12 AMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIP-DNYKVLFLQGGASLQFAMVPMNLLGG   90 (360)
T ss_pred             CCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEcCCchHHHHHHHHhcCCC
Confidence            467899999999876311   000111   11122244444444444444421 223454 4577799999999999999


Q ss_pred             CCCEEEecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHh-hcCCCccEEEEeCCCCCCccCCCHHHHHHHH
Q 021547          134 GAANILLPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEA-LADENTAAIVIINPCNPCGNVLTYQHLQKIA  210 (311)
Q Consensus       134 g~d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~  210 (311)
                      | +++++...+..+  +...++..|.. ..+......+ ..+..++++ .+++++++|.+++..+.||...+  ++.++ 
T Consensus        91 g-~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g-~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~~i-  164 (360)
T PRK05355         91 G-KKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDG-FTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELPDT-  164 (360)
T ss_pred             C-CeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccC-CCCCCChhhccCCCCCCEEEEccCCCcceEecC--ccccc-
Confidence            9 988877666654  35688888865 5554332123 234444444 77778999999999999999984  25555 


Q ss_pred             HHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          211 ETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       211 ~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                           +|+++++|.+.+.    |..+..+..++     +++.|..|.+|.+|  +|.+++++
T Consensus       165 -----~g~l~vVDavss~----g~~~idv~~~d-----~~~~ssqK~lgP~G--lg~l~~s~  210 (360)
T PRK05355        165 -----GDVPLVADMSSDI----LSRPIDVSKFG-----LIYAGAQKNIGPAG--LTIVIVRE  210 (360)
T ss_pred             -----CCCcEEEEcCccc----cCccCCHHHcc-----EEEEeccccccCCc--eEEEEECH
Confidence                 7999999999986    22334444332     89999999998666  67766654

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.21  E-value=6.6e-10  Score=101.34  Aligned_cols=206  Identities=19%  Similarity=0.140  Sum_probs=137.7

Q ss_pred             CCCeeecCCCCCCCCCCC-CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           44 PRPVIPLGHGDPAAFPCF-RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~-~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .+-+|||-+-.     .. .+.+.+.++|..   . + ..|..++.+..|++.+++++        ..+.++.|+.++.+
T Consensus        40 ~dV~IDLrSDT-----gT~apS~~m~aAM~~---G-D-D~Y~gdpSv~~Lee~vael~--------G~E~alpthqGRga  101 (467)
T TIGR02617        40 EDVFIDLLTDS-----GTGAVTQSMQAAMMR---G-D-EAYSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGA  101 (467)
T ss_pred             CCeEEECccCC-----CCCCCCHHHHHHHHc---C-C-cccccCchHHHHHHHHHHHh--------CCceEEECCCCchH
Confidence            45667877654     23 356777777764   2 2 26988889999999999999        44568889888999


Q ss_pred             HHHHHHHHhc-CCCCEEEecCC-------CCc-chHHHHHHcCcEEEEeecc--------CCCCcccCHHHHHhhcCC--
Q 021547          123 VEIILTVITR-LGAANILLPRP-------GWP-FYESFAKRNHIEVRHFDLL--------PERGWEVDLEAVEALADE--  183 (311)
Q Consensus       123 ~~~~~~~l~~-~g~d~Vl~~~p-------~~~-~~~~~~~~~g~~~~~~~~~--------~~~~~~~d~~~l~~~l~~--  183 (311)
                      -.+++..+++ +| +.+++..+       .|. .....+...|..+..++..        ...++.+|++.+++.+++  
T Consensus       102 E~Il~~~~~~~~g-~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g  180 (467)
T TIGR02617       102 EQIYIPVLIKKRE-QEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVG  180 (467)
T ss_pred             HHHHHHhhccccc-ccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcC
Confidence            9999999998 67 77775443       222 2345778889887776432        123467899999999874  


Q ss_pred             --CccEEEEeCCCC-CCccCCCHHHHHHHHHHHHHhCCEEEEeccccC--C--------ccCCCCCCccc-ccCCCCCeE
Q 021547          184 --NTAAIVIINPCN-PCGNVLTYQHLQKIAETARKLGILVIADEVYGH--L--------AFGSTPYIPMG-VFGSIVPVI  249 (311)
Q Consensus       184 --~~~~i~i~~p~n-ptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~--~--------~~~~~~~~~~~-~~~~~~~~i  249 (311)
                        +...+...-.+| -.|+.+|.+.++++.++|++||+.++.|.+--.  .        .+.+.+...+. .+-..-+ .
T Consensus       181 ~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aD-s  259 (467)
T TIGR02617       181 PNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYAD-M  259 (467)
T ss_pred             CCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCC-E
Confidence              222222222233 468899999999999999999999999986532  1        13333322221 0001111 5


Q ss_pred             EEecCcccCCCC-cceeeEEEeeC
Q 021547          250 TLGSISKRWIVP-GWRFGWLATND  272 (311)
Q Consensus       250 ~i~s~sK~~~~~-G~r~G~i~~~~  272 (311)
                      +..|+||.+++| |   |++++++
T Consensus       260 vt~slsKglgApvG---g~Lag~d  280 (467)
T TIGR02617       260 LAMSAKKDAMVPMG---GLLCFKD  280 (467)
T ss_pred             EEEEcCCCCCCccc---ceEEecc
Confidence            566999998776 4   5555544

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.21  E-value=2.7e-09  Score=100.31  Aligned_cols=251  Identities=18%  Similarity=0.088  Sum_probs=147.5

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEeCChH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLS-ADDIYITLGCM  120 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-~~~v~~t~g~~  120 (311)
                      .+++.+|||..|--... .--.+|.+.+++++++.........  .-..+.+..+++.+....+.... ...++++++++
T Consensus        55 ~dG~~ylD~~~g~~~~~-lGH~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGs  131 (459)
T PRK06931         55 VEGNQYLDCLAGAGTLA-LGHNHPDVLQSIQDVLTSGLPLHTL--DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGA  131 (459)
T ss_pred             CCCCEEEEcccchhhcc-CCCCCHHHHHHHHHHHhhhcccccc--ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcH
Confidence            35889999987732211 1236788999999988642211111  11234556667777654331111 12346668999


Q ss_pred             HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHc-C------------cEEEEeeccCCCC--cc----cCHHH----
Q 021547          121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKRN-H------------IEVRHFDLLPERG--WE----VDLEA----  176 (311)
Q Consensus       121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~-g------------~~~~~~~~~~~~~--~~----~d~~~----  176 (311)
                      +|++.+++.... .|+.+|+.....|.+....+... +            ..+..++......  +.    -+.+.    
T Consensus       132 EAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (459)
T PRK06931        132 DAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYY  211 (459)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHH
Confidence            999988887643 45478998888888765443321 1            1122222211000  00    01122    


Q ss_pred             HHhhcC------CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeE
Q 021547          177 VEALAD------ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVI  249 (311)
Q Consensus       177 l~~~l~------~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i  249 (311)
                      +++.+.      ++..++++.......|.. .+++-++++.++|++||+++|.||+..++...|. ......++-.++++
T Consensus       212 ~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~-~~a~~~~gv~PDiv  290 (459)
T PRK06931        212 FENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGK-MFAFEHAGIEPDII  290 (459)
T ss_pred             HHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCch-HHHhhhcCCCCCEE
Confidence            233222      134455555445555664 5677899999999999999999999998755553 22333344444555


Q ss_pred             EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh-hhccccCCCchhHHHHHhhhh
Q 021547          250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l~  309 (311)
                         +++|.++ .|+++|.+++..         .++.+.. ....+++.++++.+++.+.|+
T Consensus       291 ---t~gK~l~-gG~Pi~av~~~~---------~~~~~~~~~~~~T~~gnpla~aaala~L~  338 (459)
T PRK06931        291 ---VMSKAVG-GGLPLAVLGIKK---------EFDAWQPGGHTGTFRGNQLAMATGLTTLK  338 (459)
T ss_pred             ---Eeccccc-CCcceeeeeeHH---------HHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence               6699965 579999877642         1233322 234567889999888877764

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.15  E-value=1.8e-09  Score=100.89  Aligned_cols=235  Identities=16%  Similarity=0.155  Sum_probs=133.8

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.+|||..|--... .--.+|.+.+++.+++....  .+...   ...+-.+++.+.+..+   ..+.++++++|++
T Consensus        45 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~--~~~~~---~~~~~~la~~l~~~~p---~~~~v~f~~sGse  115 (431)
T PRK06209         45 VDGNEYIEYGMGLRAVG-LGHAYPPVVEAVREALQDGC--NFTRP---SAIELDAAESFLELID---GADMVKFCKNGSD  115 (431)
T ss_pred             CCCCEEEEccccccchh-cCCCCHHHHHHHHHHHHhCc--CCCCC---CHHHHHHHHHHHHhCC---ccceEEEecCHHH
Confidence            35888999987632111 12357899999999987543  23221   2222334444443222   1368999999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEec-CCCCcchHHHHH-----HcCc------EEEEeeccCCCCcccCHHHHHhhcCC--Ccc
Q 021547          122 AVEIILTVITR-LGAANILLP-RPGWPFYESFAK-----RNHI------EVRHFDLLPERGWEVDLEAVEALADE--NTA  186 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~-~p~~~~~~~~~~-----~~g~------~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~  186 (311)
                      |++.+++.... .|+.+|+.. ...|.++.....     ..+.      ....++       .-|++.+++.+..  +..
T Consensus       116 A~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~  188 (431)
T PRK06209        116 ATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR-------YNDIASLEALFEDHPGRI  188 (431)
T ss_pred             HHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC-------CCCHHHHHHHHHhCCCCE
Confidence            99998886643 343456554 233322110000     0010      011111       1267888887742  233


Q ss_pred             EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceee
Q 021547          187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG  266 (311)
Q Consensus       187 ~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G  266 (311)
                      +.++.-|-  .|...+.+.+++|.++|++||+++|+||++.++...+..  ....+.-.++   +.+++|.++ .|+.+|
T Consensus       189 aavi~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g--~~~~~gv~PD---i~t~gK~lg-gG~p~~  260 (431)
T PRK06209        189 ACVILEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRG--AQKLYGIVPD---LSCFGKALG-NGFAVS  260 (431)
T ss_pred             EEEEEccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcch--hhHHhCCCcc---eeeehhhhc-CCcccE
Confidence            44444442  234677888999999999999999999999776432111  1111222222   357899976 478899


Q ss_pred             EEEeeCCCCccchhhHHHH--Hh------hh-hccccCCCchhHHHHHhhh
Q 021547          267 WLATNDPNGVLQKSGIVGS--IK------AC-LGVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       267 ~i~~~~~~~~~~~~~~~~~--~~------~~-~~~~~~~~~~~q~~~~~~l  308 (311)
                      +++++.        ++++.  +.      .+ .+.+.++++++.+++.+.|
T Consensus       261 av~~~~--------~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l  303 (431)
T PRK06209        261 ALAGKR--------EYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATM  303 (431)
T ss_pred             EEEEHH--------HHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHH
Confidence            999853        35554  21      11 2334556677766666554

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=99.15  E-value=1.4e-09  Score=99.56  Aligned_cols=228  Identities=20%  Similarity=0.147  Sum_probs=140.6

Q ss_pred             cHHHHHHHHHHHhcCCCC---CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-------cC
Q 021547           64 AAVAEDAIVDSVRSSMFN---CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-------RL  133 (311)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-------~~  133 (311)
                      .+.+.+++.++++.-.+.   .....+ ..+|-+.+++..    +- -.-++|++++||++|++.+++...       ++
T Consensus        62 ~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~a----P~-~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p  135 (449)
T COG0161          62 RPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELA----PE-GGLDHVFFTDSGSEAVETALKMALQYWRARGQP  135 (449)
T ss_pred             CHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhC----CC-CCccEEEEeCCchHHHHHHHHHHHHHHHhcCCC
Confidence            578889999988742211   111111 345555555555    20 125789999999999999887763       24


Q ss_pred             CCCEEEecCCCCcchHHHH--------------HHcCcEEEEeeccCC------CCcc----cCHHHHHhhcCC---Ccc
Q 021547          134 GAANILLPRPGWPFYESFA--------------KRNHIEVRHFDLLPE------RGWE----VDLEAVEALADE---NTA  186 (311)
Q Consensus       134 g~d~Vl~~~p~~~~~~~~~--------------~~~g~~~~~~~~~~~------~~~~----~d~~~l~~~l~~---~~~  186 (311)
                      .+.+++.-...|.+-...+              ...-.....++....      ..+.    -..++|++.+..   ++.
T Consensus       136 ~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~I  215 (449)
T COG0161         136 QRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETI  215 (449)
T ss_pred             cceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccE
Confidence            3345777778886421111              111112223332210      1111    235566776543   556


Q ss_pred             EEEEeCC-C-CCCccCCCHHH-HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547          187 AIVIINP-C-NPCGNVLTYQH-LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW  263 (311)
Q Consensus       187 ~i~i~~p-~-nptG~~~~~~~-l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~  263 (311)
                      +.+|.-| . .-.|..++++. ++++.++|++||+++|.||+-.+|...|+.+.. ....-.++++   +++|.+...=+
T Consensus       216 AAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~-e~~gi~PDi~---~~aKGLT~GY~  291 (449)
T COG0161         216 AAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFAC-EHAGIVPDIL---CLAKGLTGGYL  291 (449)
T ss_pred             EEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhh-hhcCCCCCee---eecccccccch
Confidence            6666666 3 44787665554 999999999999999999999998777754433 3333344455   78998655557


Q ss_pred             eeeEEEeeCCCCccchhhHHHHHhhh------hccccCCCchhHHHHHhhhh
Q 021547          264 RFGWLATNDPNGVLQKSGIVGSIKAC------LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       264 r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++|.+++.+        ++.+.+..-      .+.++..+|++.+++.+-|+
T Consensus       292 Pl~a~l~~~--------~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~  335 (449)
T COG0161         292 PLSAVLTSD--------RIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLD  335 (449)
T ss_pred             hhHhHhhhH--------HHHHHHhcccCCeeccCCccccCHHHHHHHHHHHH
Confidence            777777754        466665542      34568889999888877653

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=99.14  E-value=8.3e-09  Score=99.14  Aligned_cols=161  Identities=15%  Similarity=0.064  Sum_probs=111.6

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc---------C--
Q 021547           65 AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR---------L--  133 (311)
Q Consensus        65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~---------~--  133 (311)
                      +.+...+...+-+.....|..+++...+++.+.+++.+.+|.+-  ..=.+|+|||.|+..++.....         .  
T Consensus        97 paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~  174 (608)
T TIGR03811        97 PAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFAMKEVK  174 (608)
T ss_pred             HHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccchhhhcc
Confidence            34433333333333333566667888999999999999988753  3345788998887765544321         0  


Q ss_pred             -----------------------------------------CC-----CEEEecCCCCcchHHHHHHcCcE---EEEeec
Q 021547          134 -----------------------------------------GA-----ANILLPRPGWPFYESFAKRNHIE---VRHFDL  164 (311)
Q Consensus       134 -----------------------------------------g~-----d~Vl~~~p~~~~~~~~~~~~g~~---~~~~~~  164 (311)
                                                               |.     -+++++...|.++...+..+|+.   ++.+|+
T Consensus       175 ~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~Vpv  254 (608)
T TIGR03811       175 PELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPV  254 (608)
T ss_pred             ccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeec
Confidence                                                     00     05888888899999999999995   788876


Q ss_pred             cCCCCcccCHHHHHhhcCC----C-cc-EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCC--EEEEeccccCC
Q 021547          165 LPERGWEVDLEAVEALADE----N-TA-AIVIINPCNPCGNVLTYQHLQKIAETARKLGI--LVIADEVYGHL  229 (311)
Q Consensus       165 ~~~~~~~~d~~~l~~~l~~----~-~~-~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~--~li~D~ay~~~  229 (311)
                      +  +++.+|++.|++.+.+    + +. +|+.+..+..+|.+-+.+++.+|++.++++|+  |+++|.+|+++
T Consensus       255 D--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~  325 (608)
T TIGR03811       255 D--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGY  325 (608)
T ss_pred             C--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccch
Confidence            4  5678999999987753    2 33 34445567899999994444444444478898  69999999985

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.12  E-value=4.8e-09  Score=103.83  Aligned_cols=175  Identities=17%  Similarity=0.156  Sum_probs=123.0

Q ss_pred             CCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC-ChHHHHHHHHHHHhc-------CCCCEEEecCCCCcchH
Q 021547           81 NCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDIYITL-GCMEAVEIILTVITR-------LGAANILLPRPGWPFYE  149 (311)
Q Consensus        81 ~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~-g~~~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~  149 (311)
                      +.|.|   .+|..++...+.+++.+..|.+.    +-+-. +++.+..+.+.++..       +++++||++.-.|....
T Consensus       530 hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp  605 (954)
T PRK12566        530 HPFAPREQAEGYRAMIDELEAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP  605 (954)
T ss_pred             CCCCchhhhcCHHHHHHHHHHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH
Confidence            57777   88988888888888887665433    34433 445555566666542       34478999998886555


Q ss_pred             HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc
Q 021547          150 SFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY  226 (311)
Q Consensus       150 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay  226 (311)
                      ..+...|++++.++.+  .++.+|+++|++.++   +++.++.+++|++-.+..   +++++|+++|+++|.++++|.++
T Consensus       606 asa~~~GieVv~Vp~D--~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA~  680 (954)
T PRK12566        606 ASAQMAGMRVVIVECD--PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGAN  680 (954)
T ss_pred             HHHHHCCCEEEEeccC--CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEeeC
Confidence            6688899999999875  345799999999886   577777778877655443   45999999999999999999999


Q ss_pred             cCCccCCCCCCcccccCCCCCeEEEecCcccCCCC----cceeeEEEe
Q 021547          227 GHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP----GWRFGWLAT  270 (311)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~i~~  270 (311)
                      ..-..   .......+.   -.|+.++++|+|+.|    |.-+|.+.+
T Consensus       681 ~~a~~---~l~~Pg~~G---ADi~~~s~HKtf~~P~G~GGP~vG~iav  722 (954)
T PRK12566        681 LNAQV---GLARPADIG---ADVSHMNLHKTFCIPHGGGGPGMGPIGV  722 (954)
T ss_pred             hhhcc---CCCChhhcC---CCEEEecCCcccCcCccCCCCccchhhh
Confidence            64111   111112232   349999999998744    455666444

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.11  E-value=2.5e-09  Score=91.70  Aligned_cols=150  Identities=20%  Similarity=0.222  Sum_probs=112.3

Q ss_pred             CCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecC-CCCcc-hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-Cc
Q 021547          109 SADDIYITLGCMEAVEIILTVITRLGAANILLPR-PGWPF-YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NT  185 (311)
Q Consensus       109 ~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~-p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~  185 (311)
                      ++.-+++..+++.++++++..++.|| |+|++.. ..|.. ..+.+++.|+++..++.+  -+....++++++.+.+ ++
T Consensus        67 n~~tf~isgsGh~g~E~al~N~lePg-d~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~--~G~~~~le~i~~~lsqh~p  143 (385)
T KOG2862|consen   67 NAQTFVISGSGHSGWEAALVNLLEPG-DNVLVVSTGTWGQRAADCARRYGAEVDVVEAD--IGQAVPLEEITEKLSQHKP  143 (385)
T ss_pred             CCceEEEecCCcchHHHHHHhhcCCC-CeEEEEEechHHHHHHHHHHhhCceeeEEecC--cccCccHHHHHHHHHhcCC
Confidence            34566777778999999999999999 9998764 44442 457999999999999654  4556899999887754 78


Q ss_pred             cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC-cce
Q 021547          186 AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP-GWR  264 (311)
Q Consensus       186 ~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-G~r  264 (311)
                      +++++++....||+..+  -+..+.++|++|+.+++||.+-+-   ++.++ .   +|+.+..+...+.-|++++| |+-
T Consensus       144 ~~vfv~hgdsSTgV~q~--~~~~~g~lc~k~~~lllVD~VaSl---ggt~F-~---mDewgVDvaytgSQKaL~aP~GLs  214 (385)
T KOG2862|consen  144 KAVFVTHGDSSTGVLQD--LLAISGELCHKHEALLLVDTVASL---GGTEF-E---MDEWGVDVAYTGSQKALGAPAGLS  214 (385)
T ss_pred             ceEEEEecCccccccch--HHHHHHHHhhcCCeEEEEechhhc---CCccc-e---ehhhcccEEEecchhhcCCCCCcc
Confidence            89999999999999876  456677889999999999999874   22222 2   23333446777888998886 443


Q ss_pred             eeEEEeeC
Q 021547          265 FGWLATND  272 (311)
Q Consensus       265 ~G~i~~~~  272 (311)
                      +  |.+++
T Consensus       215 i--isfS~  220 (385)
T KOG2862|consen  215 I--ISFSD  220 (385)
T ss_pred             e--eecCH
Confidence            3  54443

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.09  E-value=4.3e-09  Score=92.89  Aligned_cols=204  Identities=14%  Similarity=0.133  Sum_probs=144.8

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC------CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM------FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~------~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      ++.+++||+..+.   ..+.-.+.+.+.....++.-.      -.-|..-.-+..+.+.+++++.        .++-++-
T Consensus        92 ~G~~~~N~aS~Nf---L~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G--------~E~aivY  160 (467)
T KOG1358|consen   92 DGKDVLNFASANF---LGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG--------TEDAIVY  160 (467)
T ss_pred             cCceeecccchhh---hhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC--------Ccceeee
Confidence            4788999998884   456677888888777776311      1126655556778999999993        3445555


Q ss_pred             CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCc-----------
Q 021547          117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENT-----------  185 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-----------  185 (311)
                      +-+-+++..++.++++.| |.|.+..-...+....++...-.+.....       .|+++++..+.+.+           
T Consensus       161 s~gF~ti~S~ipafsKrG-DIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~  232 (467)
T KOG1358|consen  161 SYGFSTIESAIPAFSKRG-DIIFVDEAVNFAIQKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKAL  232 (467)
T ss_pred             ccccchhhhcchhhhccC-cEEEEehhhhHHHHHHHhhhhheeEEecC-------CCHHHHHHhccCcchhhhhcccccc
Confidence            555778999999999999 99999888888888777877777777654       26777776554322           


Q ss_pred             -cEEEEe-CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCC
Q 021547          186 -AAIVII-NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVP  261 (311)
Q Consensus       186 -~~i~i~-~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~  261 (311)
                       +-.+++ .-.-++|.+.+   +.+|+++..+|...||.||.|+.-..+  |.........+..+-.++++|+.-+++..
T Consensus       233 ~Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~  309 (467)
T KOG1358|consen  233 TRRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASG  309 (467)
T ss_pred             ceEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccccccccc
Confidence             333333 34568999999   999999999999999999999865543  33322222222233458899999987777


Q ss_pred             cceeeEEEee
Q 021547          262 GWRFGWLATN  271 (311)
Q Consensus       262 G~r~G~i~~~  271 (311)
                      |   |++++.
T Consensus       310 G---gFc~G~  316 (467)
T KOG1358|consen  310 G---GFCAGK  316 (467)
T ss_pred             C---ceeecc
Confidence            7   887763

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.07  E-value=1.5e-08  Score=90.17  Aligned_cols=248  Identities=15%  Similarity=0.121  Sum_probs=155.4

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC-C-CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-M-FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~-~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      ..+..+|||..+--...+ -...|++.+++.+.+... + .+.|-.-+ .-++.+.+.+.+.+    + ..+.|++++++
T Consensus        53 ~~g~EyiD~~ssw~~~~~-Ghanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~----~-~~~rvff~nsG  125 (433)
T KOG1401|consen   53 PDGKEYIDFTSSWAVTIL-GHANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGK----G-SAERVFFCNSG  125 (433)
T ss_pred             CCcceeeeeccceecccc-CCCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccC----C-CccEEEEecCC
Confidence            368899999877211111 234899999999887643 1 11222211 33444444444432    2 77899999999


Q ss_pred             HHHHHHHHHHHhcC---C--CC--EEEecCCCCcchH-HHHHHcCcEEEEeecc---CCC--CcccCHHHHHhhcCCCc-
Q 021547          120 MEAVEIILTVITRL---G--AA--NILLPRPGWPFYE-SFAKRNHIEVRHFDLL---PER--GWEVDLEAVEALADENT-  185 (311)
Q Consensus       120 ~~a~~~~~~~l~~~---g--~d--~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~---~~~--~~~~d~~~l~~~l~~~~-  185 (311)
                      |+|++.++..-.+.   +  -+  +++....+|.+-. .++...+......+.+   ++-  .-.-|...+++.++.+. 
T Consensus       126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~  205 (433)
T KOG1401|consen  126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG  205 (433)
T ss_pred             cHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCC
Confidence            99999888776431   1  01  4887777776532 2222222221112111   110  01126788888876543 


Q ss_pred             --cEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547          186 --AAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG  262 (311)
Q Consensus       186 --~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G  262 (311)
                        .++++...+...|.. .++|.+..|.++|+++|+++|.||+.-+|...|... ....+.-.+++   .++.|.+ ..|
T Consensus       206 ~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~-a~e~~~~~PDI---~t~aK~L-~gG  280 (433)
T KOG1401|consen  206 EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGW-AQEYFGVTPDI---TTVAKPL-GGG  280 (433)
T ss_pred             ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHH-HHHHhCcCCcc---eeehhhc-cCC
Confidence              555655556666664 477789999999999999999999999876544321 22222223233   3789985 568


Q ss_pred             ceeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547          263 WRFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       263 ~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +++|..++.+        ++.+.+..-    .+.+++.++++..++...|+
T Consensus       281 lPigA~~v~~--------kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~  323 (433)
T KOG1401|consen  281 LPIGATGVRD--------KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLD  323 (433)
T ss_pred             ceeEEEeehH--------HHHhhcCCCCccccCcccCCChhhhhHHHHHHH
Confidence            9999999865        477777643    24578899999999888765

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.07  E-value=6.7e-10  Score=99.55  Aligned_cols=232  Identities=14%  Similarity=0.108  Sum_probs=151.9

Q ss_pred             CCeeecCCCCCCCC--CCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           45 RPVIPLGHGDPAAF--PCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        45 ~~~i~~~~g~p~~~--~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..++|++.-+..-|  ...++.+.+.+++...--.-  ....-+...-..++++.+|+|+.       .++.+++..| -
T Consensus       136 ~~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g-------~e~a~vF~mG-f  207 (519)
T KOG1357|consen  136 SRCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLG-------VEDAIVFSMG-F  207 (519)
T ss_pred             eeeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcC-------CcceEEEecc-c
Confidence            34566664432111  12456777777776553210  00011222234567777788774       3445666666 6


Q ss_pred             HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-------C-----ccEE
Q 021547          121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-------N-----TAAI  188 (311)
Q Consensus       121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~-----~~~i  188 (311)
                      ......+.+|+.+| .-|+-....|......++..|+.+......       |+.+||+.+++       +     .+.+
T Consensus       208 ~TNs~~~p~l~~~g-sLIiSDelNHaSi~~GaRLSgAtiRVfkHN-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~  279 (519)
T KOG1357|consen  208 ATNSMNIPSLLGKG-SLIISDELNHASLITGARLSGATTRVFRHN-------DMQGLERLLRDAIVYGQPKTHRPWKKIL  279 (519)
T ss_pred             cccccCcceeecCC-cceeeccccchheeccccccCceEEEEecC-------CHHHHHHHHHHHHhcCCCCcCCcchhee
Confidence            66778889999999 889989999999999999999999988753       55666665542       1     2233


Q ss_pred             EE-eCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc--CCCCCCcccccCCCCCeEEEecCcccCCCCccee
Q 021547          189 VI-INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF--GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF  265 (311)
Q Consensus       189 ~i-~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~  265 (311)
                      ++ ..-...-|.+..   +.+++++++++...++.||+|+.-..  .|....-+...++.+..|.+++|+|+|++.|   
T Consensus       280 iivegiysmEg~iv~---Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---  353 (519)
T KOG1357|consen  280 ICVEGIYSMEGTIVD---LPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---  353 (519)
T ss_pred             eeeccceeccCeecc---cHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---
Confidence            33 333456677766   99999999999999999999986433  2333333444556666799999999999999   


Q ss_pred             eEEEeeCCCCccchhhHHHHHhhhhcc----ccCCCchhHHHHHh
Q 021547          266 GWLATNDPNGVLQKSGIVGSIKACLGV----RSGPSTLIQVCEMF  306 (311)
Q Consensus       266 G~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~q~~~~~  306 (311)
                      ||+.++.        ++++.++.....    +..+++++|.....
T Consensus       354 Gyiagsk--------~lid~lrt~s~~~~yat~~sppvaqq~~ss  390 (519)
T KOG1357|consen  354 GYIAGSK--------ELIDYLRTPSPSALYATSLSPPVAQQILTS  390 (519)
T ss_pred             ceecCcH--------HHHhhhccCCCceeecccCChHHHHHHHHH
Confidence            9988754        367777765332    34556666655443

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.01  E-value=3.5e-09  Score=96.76  Aligned_cols=181  Identities=13%  Similarity=0.036  Sum_probs=113.0

Q ss_pred             CCCcHHHHHHHHHHHhcCC-CCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe-CChHHHHHHHHHHHhcCCCC
Q 021547           61 FRTAAVAEDAIVDSVRSSM-FNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYIT-LGCMEAVEIILTVITRLGAA  136 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~-~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t-~g~~~a~~~~~~~l~~~g~d  136 (311)
                      ...++.++++|.....+-. ..++++  ..-+.+.|+.++++++.     .+..+|+++ +|+|.++++++..+..+  +
T Consensus        12 ~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~-----~~~~~v~f~~gs~T~a~~~~~~~l~~~--~   84 (361)
T TIGR01366        12 SKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSL-----PDGYEVILGNGGATAFWDAATFGLIEK--K   84 (361)
T ss_pred             cCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCC-----CCCceEEEECCchhHHHHHHHHhcccc--c
Confidence            4567889999775421110 112222  22345667777777732     123478876 55999999999998743  3


Q ss_pred             EEEecCCCCc-chHHHHHHc--CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 021547          137 NILLPRPGWP-FYESFAKRN--HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETA  213 (311)
Q Consensus       137 ~Vl~~~p~~~-~~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~  213 (311)
                      .+++..-.|. .+.+.+...  +.++..++...  +.     .++..++++++++.+++..|.||...|   +++|   +
T Consensus        85 ~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~lV~~~h~et~tG~~~p---i~~I---~  151 (361)
T TIGR01366        85 SLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP--GS-----APEPQADPGVDVIAWAHNETSTGVAVP---VRRP---E  151 (361)
T ss_pred             ccEEecCHHHHHHHHHHHhhhccCCceEEecCC--CC-----CCCCccCCCCCEEEEcccCCccceecc---cccc---c
Confidence            3344445554 233444442  22555555421  21     222245678999999999999999999   4444   4


Q ss_pred             HHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          214 RKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       214 ~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      +++|+++++|.+.+.    |..+..+...     .+++.|..|.++.+|- ++.++++
T Consensus       152 ~~~g~~~iVDavqs~----g~~~idv~~~-----D~~~~s~~K~lg~~~G-l~~~~~s  199 (361)
T TIGR01366       152 GSDDALVVIDATSGA----GGLPVDIAET-----DVYYFAPQKNFASDGG-LWLAIMS  199 (361)
T ss_pred             ccCCCeEEEEcCccc----cCCCCCHHHC-----CEEEEEchhhcCCCCc-eEEEEEC
Confidence            789999999999986    2233333332     2899999999998852 4444443

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=99.01  E-value=1e-07  Score=85.62  Aligned_cols=222  Identities=17%  Similarity=0.082  Sum_probs=152.2

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHH-HHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547           62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLAR-RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL  140 (311)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr-~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~  140 (311)
                      ..++++.+++.+.+.......|.-..|...-| ..+++.+..    ...++.+++++..+.|+.+++.++..+.  +|++
T Consensus        38 ~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~----~~~aea~~ivnnn~aAVll~~~al~~~~--EvVi  111 (395)
T COG1921          38 LYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCG----LTGAEAAAIVNNNAAAVLLTLNALAEGK--EVVV  111 (395)
T ss_pred             cCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhc----ccchhheeeECCcHHHHHHHHhhhccCC--eEEE
Confidence            35688899999888755433555433433222 244444432    3356889999999999999999998744  5554


Q ss_pred             c----C-CCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCC-CCccCCCHHHHHHHHHHHH
Q 021547          141 P----R-PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCN-PCGNVLTYQHLQKIAETAR  214 (311)
Q Consensus       141 ~----~-p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~n-ptG~~~~~~~l~~l~~l~~  214 (311)
                      .    . +.+++....++..|.+++.+...    ......+++.++++++++++-++.+| +.--.++   +++++++|+
T Consensus       112 s~g~lV~gg~~~v~d~~~~aG~~l~EvG~t----n~t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~---~~~l~~ia~  184 (395)
T COG1921         112 SRGELVEGGAFRVPDIIRLAGAKLVEVGTT----NRTHLKDYELAINENTALLLKVHSSNYGFTGMLS---EEELVEIAH  184 (395)
T ss_pred             EccccccCCCCChhHHHHHcCCEEEEeccc----CcCCHHHHHHHhccCCeeEEEEeecccccccccc---HHHHHHHHH
Confidence            3    2 57788999999999999998642    24688999999999999987776544 3222445   788999999


Q ss_pred             HhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccc
Q 021547          215 KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVR  293 (311)
Q Consensus       215 ~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~  293 (311)
                      ++|+++++|.+-+..+-...   .+..+-..+..++++|-.|.++  |.+-|.|++..        +++.+++.. ....
T Consensus       185 ~~~lpvivD~aSg~~v~~e~---~l~~~la~GaDLV~~SgdKllg--GPqaGii~GkK--------elI~~lq~~~l~Ra  251 (395)
T COG1921         185 EKGLPVIVDLASGALVDKEP---DLREALALGADLVSFSGDKLLG--GPQAGIIVGKK--------ELIEKLQSHPLKRA  251 (395)
T ss_pred             HcCCCEEEecCCcccccccc---chhHHHhcCCCEEEEecchhcC--CCccceEechH--------HHHHHHHhhhhhhh
Confidence            99999999999987643111   1222222333488999999865  56678887732        588887776 3334


Q ss_pred             cCCCchhHHHHHhhhh
Q 021547          294 SGPSTLIQVCEMFLLV  309 (311)
Q Consensus       294 ~~~~~~~q~~~~~~l~  309 (311)
                      .-+..+..+++.+.|+
T Consensus       252 lrv~K~tla~l~~aLe  267 (395)
T COG1921         252 LRVDKETLAALEAALE  267 (395)
T ss_pred             hhcCcHhHHHHHHHHH
Confidence            4556666666655543

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=98.97  E-value=2.6e-08  Score=93.40  Aligned_cols=247  Identities=13%  Similarity=0.030  Sum_probs=137.1

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHH-HhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDS-VRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG  118 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~-~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g  118 (311)
                      .+++.++||..|--... .--.+|.+.+++.++ ....  ....|.. ....++-+.+++.+.+..+  -.-+.|+++++
T Consensus        55 ~dG~~ylD~~sg~~~~~-lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~-~~~~~la~~l~~~l~~~~p--~~~~~v~f~~S  130 (464)
T TIGR00699        55 VDGNRLLDLYSQISSIP-IGYNNPALLKAAQSPEMATTLINRPALGN-FPSKDWAKILKEGILKVAP--KGQDQVWTGMS  130 (464)
T ss_pred             CCCCEEEEccCCHhhhc-CCCCCHHHHHHHHHHHHHHhhcccccCCc-HHHHHHHHHHHHhHHhhCC--CCcCEEEEeCC
Confidence            35889999987732211 124678999999874 2221  1112221 1123344444432222222  12368999999


Q ss_pred             hHHHHHHHHHHHhc--------------------------CC--CCEEEecCCCCcchHHHHHH-cCcE-----------
Q 021547          119 CMEAVEIILTVITR--------------------------LG--AANILLPRPGWPFYESFAKR-NHIE-----------  158 (311)
Q Consensus       119 ~~~a~~~~~~~l~~--------------------------~g--~d~Vl~~~p~~~~~~~~~~~-~g~~-----------  158 (311)
                      |++|++.+++....                          .|  +.+|+....+|.+....+.. .+..           
T Consensus       131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~  210 (464)
T TIGR00699       131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD  210 (464)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence            99999998887631                          11  12799888888765433222 2211           


Q ss_pred             EEEeeccCCC-Cc-----------ccCHHHHHhhcC---CCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEE
Q 021547          159 VRHFDLLPER-GW-----------EVDLEAVEALAD---ENTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIA  222 (311)
Q Consensus       159 ~~~~~~~~~~-~~-----------~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~  222 (311)
                      ...+|..... .+           .-+++.+++.+.   .++.++++.......|... +++.++++.++|++||+++|+
T Consensus       211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~  290 (464)
T TIGR00699       211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIV  290 (464)
T ss_pred             ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence            1111111000 00           013455666664   2455566655566678766 677899999999999999999


Q ss_pred             eccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh-hhccccCCCch
Q 021547          223 DEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA-CLGVRSGPSTL  299 (311)
Q Consensus       223 D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  299 (311)
                      ||++.++...|.. .....++-  .+++   .+++|.++..|    +++..+         ....... ....++..+++
T Consensus       291 DEV~tGfGrtG~~-fa~e~~gv~~~PDi---~t~gK~lg~gG----~~~~~~---------~~~~~~~~~~~~T~~gnp~  353 (464)
T TIGR00699       291 DEVQTGVGATGKF-WAHEHWNLDDPPDM---VTFSKKFQTAG----YFFHDP---------AFRPNKPYRQFNTWMGDPS  353 (464)
T ss_pred             eeeeeCCCCCcch-hHHHhcCCCCCCCE---EEehhhhccCC----ccccch---------hccCCCCcccccCCCCCHH
Confidence            9999887554432 22222222  1334   37799875444    333221         1111111 23346678888


Q ss_pred             hHHHHHhhhh
Q 021547          300 IQVCEMFLLV  309 (311)
Q Consensus       300 ~q~~~~~~l~  309 (311)
                      +.+++.+.|+
T Consensus       354 ~~aaa~a~L~  363 (464)
T TIGR00699       354 RALILREIIQ  363 (464)
T ss_pred             HHHHHHHHHH
Confidence            8887775553

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=98.97  E-value=7.4e-08  Score=95.72  Aligned_cols=231  Identities=16%  Similarity=0.073  Sum_probs=139.0

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-----C----
Q 021547           63 TAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR-----L----  133 (311)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~-----~----  133 (311)
                      .+|++.+++.+++.+-.  .+....-..+-...+++.|.+..+.+ ..+.|+++++|++|++.+++....     .    
T Consensus       383 ~~p~I~~Ai~~Qa~rl~--hv~~~~~~hepa~~LAe~L~~~~~~~-~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~  459 (817)
T PLN02974        383 LQPELARAVAYAAGRYG--HVMFPENVHEPALRAAELLLGGPGKG-WASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLE  459 (817)
T ss_pred             CCHHHHHHHHHHHhhCC--ccccCccCCHHHHHHHHHHHhccCCC-CCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCc
Confidence            48999999999987432  11111112344455666665422100 135899999999999987775521     1    


Q ss_pred             -----------CCCEEEecCCCCcchHHHHHHcCc----------E-----EEEeecc-------------CCC------
Q 021547          134 -----------GAANILLPRPGWPFYESFAKRNHI----------E-----VRHFDLL-------------PER------  168 (311)
Q Consensus       134 -----------g~d~Vl~~~p~~~~~~~~~~~~g~----------~-----~~~~~~~-------------~~~------  168 (311)
                                 ++.+||.....|.+-...+...+-          .     ...++..             +..      
T Consensus       460 ~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~  539 (817)
T PLN02974        460 NSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLE  539 (817)
T ss_pred             ccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccccccc
Confidence                       235788888888753222222111          0     0011100             000      


Q ss_pred             ----Ccc-----cC------------HHHHHhhcC--------CCccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHhC
Q 021547          169 ----GWE-----VD------------LEAVEALAD--------ENTAAIVIINP-CNPCGNVL-TYQHLQKIAETARKLG  217 (311)
Q Consensus       169 ----~~~-----~d------------~~~l~~~l~--------~~~~~i~i~~p-~nptG~~~-~~~~l~~l~~l~~~~~  217 (311)
                          .|.     .+            .+.+++.+.        ++..++++... +.-.|..+ ++.-++++.++|++||
T Consensus       540 ~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~g  619 (817)
T PLN02974        540 GEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRK  619 (817)
T ss_pred             ccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhC
Confidence                000     00            134555443        23444444442 56668765 6777999999999999


Q ss_pred             CEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh------h-
Q 021547          218 ILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA------C-  289 (311)
Q Consensus       218 ~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~------~-  289 (311)
                      +++|.||++.+|...|.-+ ....++..++++   .++|.++ .| +++|.+++.+        ++.+.+..      + 
T Consensus       620 ilLI~DEV~TGfGRtG~~f-a~e~~gv~PDIi---~~gKgLt-gG~~Plaa~l~~~--------~I~~~f~~~~~~~~~~  686 (817)
T PLN02974        620 IPVIFDEVFTGLWRLGVES-AWELLGCKPDIA---CYAKLLT-GGLVPLAATLATE--------EVFEAFRGPSKLDALL  686 (817)
T ss_pred             CEEEEeecccCCCcccchh-hHHhcCCCCCEE---eeccccc-CCCCccEEEEEcH--------HHHHhhccccccCCcc
Confidence            9999999999987666432 333444444555   7899964 57 6999999854        36666532      2 


Q ss_pred             hccccCCCchhHHHHHhhhh
Q 021547          290 LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       290 ~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .+.+++.++++.+++.+.|+
T Consensus       687 hg~Ty~gnpl~cAaala~L~  706 (817)
T PLN02974        687 HGHSYTAHPMGCAAAAKALQ  706 (817)
T ss_pred             cCCCCCcCHHHHHHHHHHHH
Confidence            34577889999998877664

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=98.95  E-value=1.2e-08  Score=88.25  Aligned_cols=236  Identities=19%  Similarity=0.117  Sum_probs=148.0

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF---NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      +...+||-.+.-. ..+-.++|-+.+++++..+.-.+   ..|.+  -+.++.+.+..++        .-+.|+.++.+.
T Consensus        58 Gk~ylDflsaysa-VnqGhchpki~~aLqeq~~kLtlssrafYnd--~~~~f~~~vt~lf--------~~~kvlpmnTGa  126 (427)
T KOG1402|consen   58 GKEYLDFLSAYSA-VNQGHCHPKIIKALQEQADKLTLSSRAFYND--VLGEFAEYVTKLF--------GYDKVLPMNTGA  126 (427)
T ss_pred             ccchhhhhhhhhh-cccCCCCHHHHHHHHHHHhHhhhhhHHHhhh--hHHHHHHHHHHhc--------Ccceeeecccch
Confidence            5666666655222 12345788999999988763111   13544  3345666666666        345688888889


Q ss_pred             HHHHHHHHHHhc--------C-CCCEEEecCCCCcchHH----------HHHHcCc---E-EEEeeccCCCCcccCHHHH
Q 021547          121 EAVEIILTVITR--------L-GAANILLPRPGWPFYES----------FAKRNHI---E-VRHFDLLPERGWEVDLEAV  177 (311)
Q Consensus       121 ~a~~~~~~~l~~--------~-g~d~Vl~~~p~~~~~~~----------~~~~~g~---~-~~~~~~~~~~~~~~d~~~l  177 (311)
                      +|.+.++....+        | ....|+.....|.+-..          ..+..|.   . +..+|.       -|.++|
T Consensus       127 Ea~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-------~d~eal  199 (427)
T KOG1402|consen  127 EAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-------GDAEAL  199 (427)
T ss_pred             hHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-------CCHHHH
Confidence            999988877642        2 21234444444432110          1111110   0 112221       278999


Q ss_pred             HhhcCCCccEEEEeCC-CCCCccCCCHHH-HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547          178 EALADENTAAIVIINP-CNPCGNVLTYQH-LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS  255 (311)
Q Consensus       178 ~~~l~~~~~~i~i~~p-~nptG~~~~~~~-l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s  255 (311)
                      +.++++...+.|+.-| +...|++.|++. +++..++|++||+++|.||++.++..+|+ +.....-.-.+++|   -|.
T Consensus       200 e~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk-~la~d~env~PDiv---ilg  275 (427)
T KOG1402|consen  200 EVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGK-LLACDYENVRPDIV---ILG  275 (427)
T ss_pred             HHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCc-EEEeehhhcCCCeE---EEe
Confidence            9988875555555555 788998777665 99999999999999999999999877664 22221111122334   367


Q ss_pred             ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |.++..=.+++.+++.+        +++..++.- .+.+...||++.+++.+.|+
T Consensus       276 KalSGG~~Pvsavl~~~--------~im~~~~pgeHgsTyggNpLg~~vaiAale  322 (427)
T KOG1402|consen  276 KALSGGVYPVSAVLADD--------DIMLNIKPGEHGSTYGGNPLGCAVAIAALE  322 (427)
T ss_pred             ccccCCeeeeEEEEecH--------HHHhccCCCccccccCCChHHHHHHHHHHH
Confidence            88766558888888754        477777766 45678899999888777654

>PRK08297 L-lysine aminotransferase; Provisional

Probab=98.95  E-value=6.4e-08  Score=90.73  Aligned_cols=251  Identities=13%  Similarity=0.056  Sum_probs=134.7

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHH--HHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAED--AIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~--a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      +++.++||..|--... .--.+|.+.+  ++++++..-.........-..+....+++.+.+..+ +-..+.|+++++|+
T Consensus        43 dG~~ylD~~~g~~~~~-lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~~~~v~f~~SGs  120 (443)
T PRK08297         43 TGRRYLDMFTFFASSA-LGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPELPHLFFVDGGA  120 (443)
T ss_pred             CCCEeeecccCHhhhc-CCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCCCCEEEEeCchH
Confidence            5788888876621111 1235678888  888887531100000000111233334444443221 11236899999999


Q ss_pred             HHHHHHHHHHhc-------------CCCCEEEecCCCCcchHHHHHHc-CcEEE-----------EeeccCC----CCcc
Q 021547          121 EAVEIILTVITR-------------LGAANILLPRPGWPFYESFAKRN-HIEVR-----------HFDLLPE----RGWE  171 (311)
Q Consensus       121 ~a~~~~~~~l~~-------------~g~d~Vl~~~p~~~~~~~~~~~~-g~~~~-----------~~~~~~~----~~~~  171 (311)
                      +|++.+++....             +++.+|+....+|.+....+... +....           .++....    ....
T Consensus       121 EAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (443)
T PRK08297        121 LAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGED  200 (443)
T ss_pred             HHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccc
Confidence            999998887731             12267998888887654333322 21100           0100000    0000


Q ss_pred             ---------cCHHHHHhhcC---CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc
Q 021547          172 ---------VDLEAVEALAD---ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP  238 (311)
Q Consensus       172 ---------~d~~~l~~~l~---~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~  238 (311)
                               -+++.+++.+.   .++.++++.......|. ..+++.+++|.++|++||+++|.||++.++...|.. ..
T Consensus       201 ~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~-~a  279 (443)
T PRK08297        201 LEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTA-WA  279 (443)
T ss_pred             cchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchH-HH
Confidence                     02344455553   34555555544555565 467888999999999999999999999887555432 12


Q ss_pred             ccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHH-HHh--hhhccccCCCchhHHHHHhhhh
Q 021547          239 MGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVG-SIK--ACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       239 ~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ...++-.++++   +++|.++     +|.+++...  +.   ++.. .+.  .....+++.++++.+++.+.|+
T Consensus       280 ~~~~gv~PDiv---~~gK~l~-----~~a~l~~~~--i~---~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~  340 (443)
T PRK08297        280 YQQLGVRPDIV---AFGKKTQ-----VCGIMAGRR--VD---EVEDNVFAVSSRINSTWGGNLVDMVRARRILE  340 (443)
T ss_pred             HHhcCCCCCEE---Eeccccc-----ccceecchH--HH---HhhhhhccCccccCCCCCccHHHHHHHHHHHH
Confidence            22233333444   5799853     344443321  00   0111 111  1133466789998888877764

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=98.94  E-value=1.3e-07  Score=88.60  Aligned_cols=250  Identities=14%  Similarity=0.081  Sum_probs=134.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHH--HHHHHHHhcCCCCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAE--DAIVDSVRSSMFNCYAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~--~a~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      +++.+|||..|--.... --.+|.+.  +++.+++.......... ....+. ...+++.+.+..+ +-..+.++++++|
T Consensus        36 dG~~ylD~~~g~~~~~l-Gh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~-~~~~~~v~f~~sG  112 (431)
T TIGR03251        36 DGRRYLDMFSFFASMAL-GMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVA-MARFVDTFARVLG-DPALPHLFFIEGG  112 (431)
T ss_pred             CCCChhhcccChhhcCC-CCCChhhhHHHHHHHHHHHhhhcccccCCCCCHH-HHHHHHHHHHhcC-CCCcCEEEEeCCc
Confidence            57888888766322111 23567777  88888876432100111 111222 3334444433211 1134689999999


Q ss_pred             HHHHHHHHHHHhc--------CC-----CCEEEecCCCCcchHHHHH-HcCcE-E--EEeec-------cC-------CC
Q 021547          120 MEAVEIILTVITR--------LG-----AANILLPRPGWPFYESFAK-RNHIE-V--RHFDL-------LP-------ER  168 (311)
Q Consensus       120 ~~a~~~~~~~l~~--------~g-----~d~Vl~~~p~~~~~~~~~~-~~g~~-~--~~~~~-------~~-------~~  168 (311)
                      ++|++.+++....        .|     +.+|+....+|.+....+. ..+.. .  ...+.       .+       ..
T Consensus       113 sEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  192 (431)
T TIGR03251       113 ALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAP  192 (431)
T ss_pred             HHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCcccc
Confidence            9999998887642        11     2679988888876543222 22211 0  00010       00       00


Q ss_pred             Ccc-------cCHHHHHhhcC---CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCC
Q 021547          169 GWE-------VDLEAVEALAD---ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI  237 (311)
Q Consensus       169 ~~~-------~d~~~l~~~l~---~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~  237 (311)
                      ...       -+++++++.+.   .++.++++.......|.. .+++.+++|.++|++||+++|+||++.++...|.. .
T Consensus       193 ~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~-~  271 (431)
T TIGR03251       193 NLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTA-W  271 (431)
T ss_pred             ccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchH-H
Confidence            000       12344444442   356666666656667765 57788999999999999999999999987655432 2


Q ss_pred             cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHH-Hh--hhhccccCCCchhHHHHHhhhh
Q 021547          238 PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGS-IK--ACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       238 ~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ....++-.++++   .++|.+  +.  .|++. ...  +.   ++... +.  .....+++.++++.+++.+.|+
T Consensus       272 a~~~~gv~PDi~---~~gK~~--~~--~g~~~-~~~--i~---~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~  333 (431)
T TIGR03251       272 AYQQLGVQPDIV---AFGKKT--QV--CGIMA-GRR--VD---EVADNVFAVPSRLNSTWGGNLVDMVRATRILE  333 (431)
T ss_pred             HHHhcCCCCCEE---EecccC--cc--ceEEe-cch--HH---HhhhhcccCccccCCCCCCCHHHHHHHHHHHH
Confidence            222333333444   478874  21  24543 321  00   11111 11  1123356678888877776654

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=98.94  E-value=1.9e-08  Score=88.91  Aligned_cols=250  Identities=18%  Similarity=0.112  Sum_probs=152.9

Q ss_pred             hccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           39 VDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        39 ~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      +....++.++|+-.|.-..- .-.++|.+.+++.+++..-  ....|..+ -..++-+++++.+      +-.-..++++
T Consensus        44 lyDe~G~ryLD~f~Gi~tvs-lGHchP~v~~a~~kQl~~l~H~t~~~~~~-pi~~~Ae~L~s~~------P~~l~~vfF~  115 (442)
T KOG1404|consen   44 LYDEEGRRYLDAFGGIVTVS-LGHCHPDVVAAAVKQLKKLYHTTSGYLNP-PIHDLAEALVSKL------PGDLKVVFFV  115 (442)
T ss_pred             EEcCCCceeehhhCCeEEEE-cCCCChHHHHHHHHhhhhhEEeeccccCC-cHHHHHHHHHHhC------CCCceEEEEe
Confidence            33445888888887733221 2347889999999988531  23345543 3567777777777      3344569999


Q ss_pred             CChHHHHHHHHHHHhc-CCCCEEEecCCCCcchH-HHHHHcCcEEEEeec-------------cCCCC-cccC-------
Q 021547          117 LGCMEAVEIILTVITR-LGAANILLPRPGWPFYE-SFAKRNHIEVRHFDL-------------LPERG-WEVD-------  173 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~-------------~~~~~-~~~d-------  173 (311)
                      +++++|+++++..... .|.-.++--..+|.+.. ..+-..+...-..+.             ++..+ |+=+       
T Consensus       116 nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d  195 (442)
T KOG1404|consen  116 NSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASD  195 (442)
T ss_pred             cCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHH
Confidence            9999999988776642 33235666666665432 222222222111111             00000 0000       


Q ss_pred             --HHHHHhhc---CCCccEEEEe-CCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547          174 --LEAVEALA---DENTAAIVII-NPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV  246 (311)
Q Consensus       174 --~~~l~~~l---~~~~~~i~i~-~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~  246 (311)
                        .+++++.+   .+++.+.++. +...-.|.+ +++--+++..++|+++|.++|.||+..++...| .+..+.+.+-  
T Consensus       196 ~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~v--  272 (442)
T KOG1404|consen  196 RYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-HMWGFESHGV--  272 (442)
T ss_pred             HHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-ccccccccCC--
Confidence              13334433   2344555555 445555654 344459999999999999999999999987666 4444444333  


Q ss_pred             CeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh-c-cccCCCchhHHHHHhhhh
Q 021547          247 PVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL-G-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       247 ~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~q~~~~~~l~  309 (311)
                       +=-|-+++|.. ..|+++|.++...        ++.+-+.+.. . .+...+|++.++..+.|+
T Consensus       273 -~PDIvTmAKgi-GnG~Pl~AVvtt~--------EIa~v~~~~~~~fnTyggnP~a~avg~aVL~  327 (442)
T KOG1404|consen  273 -VPDIVTMAKGI-GNGFPLGAVVTTP--------EIADVLNQKSSHFNTYGGNPVACAVGLAVLK  327 (442)
T ss_pred             -CccHHHHHhhc-cCCCcceeeecCH--------HHHHHHHhccccccccCCCchhHHHHHHHHH
Confidence             33344999995 5789999999854        3666666554 2 457889998888877664

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=98.88  E-value=2e-07  Score=84.48  Aligned_cols=198  Identities=12%  Similarity=0.003  Sum_probs=124.3

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC-----CCCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-----MFNCYAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~-----~~~~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      ..++|+-|-      ...|++|++.+++.+-..     .....++ ++-..++-+.+.+.+++.++++-+-+-+++..|+
T Consensus         4 ~~~nF~aGP------a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~Ggg   77 (364)
T PRK12462          4 NQLNFSGGP------GALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGS   77 (364)
T ss_pred             ccceecCCC------cCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccH
Confidence            467888883      346788888888766421     1112222 2344556666666676666654333334556779


Q ss_pred             HHHHHHHHHHHhcCCCCEEE--ecCCCCcc-hHHHHHHcCcEEEEeeccCCCC--cccCHHHHHhhcCCCccEEEEeCCC
Q 021547          120 MEAVEIILTVITRLGAANIL--LPRPGWPF-YESFAKRNHIEVRHFDLLPERG--WEVDLEAVEALADENTAAIVIINPC  194 (311)
Q Consensus       120 ~~a~~~~~~~l~~~g~d~Vl--~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~--~~~d~~~l~~~l~~~~~~i~i~~p~  194 (311)
                      |.+++++...|+.+| |+++  +..-.|.. +...++..| ++..+......+  ..++++++  .++++.+.+.+++-.
T Consensus        78 T~~~ea~~~Nll~~g-~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NE  153 (364)
T PRK12462         78 SLQFSMIPMNFSRPG-AAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNE  153 (364)
T ss_pred             HHHHHHHHHHcCCCC-CcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCC
Confidence            999999999999999 8665  44444432 345666666 444442111111  23445554  234567788888878


Q ss_pred             CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      ..+|+.++        ++.+.++.++|+|.+-..+.    .+..+..++     +++.|.-|.+|.||  ++.+++++
T Consensus       154 TstGv~~~--------~~~~~~~~llvvD~sS~~~s----~pid~~~~d-----vi~agsQKnlgP~G--ltvvivs~  212 (364)
T PRK12462        154 TVEGLQFP--------DAAGLPDSPLIADMSSDFMS----RPFDVEAYG-----MVYAHAQKNLGPAG--VTVAIIRR  212 (364)
T ss_pred             CCceEecC--------cccccCCCeEEEEcCchhhC----CCCChHHcc-----EEEeeccccCCCCc--eEEEEECH
Confidence            89999886        22223689999999988633    334444442     88889999999777  45666554

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=98.88  E-value=1e-07  Score=81.63  Aligned_cols=174  Identities=19%  Similarity=0.193  Sum_probs=117.2

Q ss_pred             CCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec-CCCCcchHH---------
Q 021547           82 CYAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLP-RPGWPFYES---------  150 (311)
Q Consensus        82 ~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~-~p~~~~~~~---------  150 (311)
                      +|+. +-|-..|.+..|+-+    |.....-+..+.+| |+|+..++..+++|| |+.+.. .--|.....         
T Consensus        59 GYGydD~GRdtLe~vyA~vf----~aE~a~VRpq~isG-THAI~~aLfg~LRpg-Dell~i~G~PYDTLeevIG~rg~~~  132 (416)
T COG4100          59 GYGYDDLGRDTLERVYAQVF----GAEAALVRPQIISG-THAIACALFGILRPG-DELLYITGSPYDTLEEVIGLRGEGQ  132 (416)
T ss_pred             CCCccccchhHHHHHHHHHh----ccccceeeeeeecc-hhHHHHHHHhccCCC-CeEEEecCCcchhHHHHhccCCCCc
Confidence            4543 346555555555555    32333334455555 899999999999999 988854 333433322         


Q ss_pred             -HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHh--CCEEEEeccc
Q 021547          151 -FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP-CNPCGNVLTYQHLQKIAETARKL--GILVIADEVY  226 (311)
Q Consensus       151 -~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~--~~~li~D~ay  226 (311)
                       .++..|+....+++.  .++.+|.+.++..+++++|++.+... .+..--.++.+++++++++.++-  |+++++|++|
T Consensus       133 gSL~dfgi~Y~~v~Lt--~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCY  210 (416)
T COG4100         133 GSLKDFGIKYKAVPLT--ADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCY  210 (416)
T ss_pred             ccHHHhCcceeecccc--cCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence             445666777777765  35679999999999999999988753 44444458889999999999876  7999999999


Q ss_pred             cCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce-eeEEEe
Q 021547          227 GHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR-FGWLAT  270 (311)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r-~G~i~~  270 (311)
                      ++|+-.-+|. .      -+..+..+|+-|+-|..=.. -||+.+
T Consensus       211 GEFvE~~EPt-~------vGaDliAGSLIKNpGGgiaktGGYiaG  248 (416)
T COG4100         211 GEFVEEKEPT-H------VGADLIAGSLIKNPGGGIAKTGGYIAG  248 (416)
T ss_pred             hhhhhccCcc-c------cchhhhccceeeCCCCceeeccceeec
Confidence            9987543322 1      11227888999984332111 266655

>PLN02452 phosphoserine transaminase

Probab=98.85  E-value=1.5e-07  Score=85.77  Aligned_cols=199  Identities=10%  Similarity=-0.008  Sum_probs=127.0

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----FNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG  118 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g  118 (311)
                      ..+++|+-|-      ...|+.|++++++.+-...     ....+ .+.-..++-+.+.+.+++.++.+-+-+-+++..|
T Consensus         6 ~~~~~f~pGP------~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gs   79 (365)
T PLN02452          6 GRVFNFSAGP------ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGG   79 (365)
T ss_pred             CceEeeeCCC------CCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCc
Confidence            4578898884      4568999999988753210     11111 1234455666666666666664333334566788


Q ss_pred             hHHHHHHHHHHHhcCCCCEEEecCCCCcc--hHHHHHHcCcEEEEeeccCCCC--cccCHHHHHhhcCCCccEEEEeCCC
Q 021547          119 CMEAVEIILTVITRLGAANILLPRPGWPF--YESFAKRNHIEVRHFDLLPERG--WEVDLEAVEALADENTAAIVIINPC  194 (311)
Q Consensus       119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~--~~~d~~~l~~~l~~~~~~i~i~~p~  194 (311)
                      +|.+++++...|+.+| +++++...+..+  ....++..|...+.... ...+  ..+++++++.  +++.+.+.+++..
T Consensus        80 gt~~~ea~~~nl~~~~-~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~v~~~hnE  155 (365)
T PLN02452         80 ASTQFAAIPLNLCKPG-DKADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEWEL--TPDAKFVHICANE  155 (365)
T ss_pred             cHHHHHHHHHhcCCCC-CeEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHcCC--CCCCcEEEECCCC
Confidence            8999999999999999 888877766654  34677778764333321 1111  1345555422  4567888888888


Q ss_pred             CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      ..||+.++  +++++.      ++++|+|.+.....    .+..+..++     +...|..|.+|.+|  +|.++++.
T Consensus       156 TstGv~~~--~~~~i~------~~~lvVDa~Ss~g~----~pidv~~~~-----v~~~saqK~lGP~G--l~~v~vr~  214 (365)
T PLN02452        156 TIHGVEFK--DYPDVG------NVPLVADMSSNFLS----KPVDVSKYG-----VIYAGAQKNVGPSG--VTIVIIRK  214 (365)
T ss_pred             CCCcEecC--cccccC------CCeEEEECCccccC----cccCHHHcC-----EEEEecccccCCCC--eEEEEEcH
Confidence            89999643  255543      38999999998632    333443332     34469999999888  67777653

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=98.82  E-value=1e-07  Score=87.09  Aligned_cols=178  Identities=14%  Similarity=-0.000  Sum_probs=117.8

Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-cCCCCEEEecCCCC
Q 021547           67 AEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-RLGAANILLPRPGW  145 (311)
Q Consensus        67 ~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~g~d~Vl~~~p~~  145 (311)
                      +.+++.+..-+.  .++  ++...++-+.+.+.+++.++.+.+.+-++++.|+|.++++++..++ ++| ++||+.. .|
T Consensus        19 ~~~~~~~~~~~~--~HR--s~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g-~~vLv~g-~F   92 (374)
T TIGR01365        19 SIEELKNAPLGR--SHR--SKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRG-VDVLAWE-SF   92 (374)
T ss_pred             hHHHHhhhhccc--CcC--CHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCC-CeEEEEC-HH
Confidence            566665433211  123  3355667677777777766643233336779999999999999998 478 8999865 55


Q ss_pred             cch-H-HHHHHcCcE-EEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547          146 PFY-E-SFAKRNHIE-VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA  222 (311)
Q Consensus       146 ~~~-~-~~~~~~g~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~  222 (311)
                      ..- . .+++..|++ +..+..  ..+..+++++++.  .   +.+++++.-..||+..+   +++++..+  ++.++|+
T Consensus        93 G~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~--~---~~v~~vhnETSTGv~np---v~~i~~~~--~~~lliV  160 (374)
T TIGR01365        93 GKGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF--K---NDVVFTWNGTTSGVRVP---NGDFIPAD--REGLTIC  160 (374)
T ss_pred             HHHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC--C---CCEEEecCCCchheecc---cccccccc--CCCcEEE
Confidence            432 4 788889994 677653  2444678888873  1   23677887889999998   44444322  4899999


Q ss_pred             eccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          223 DEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       223 D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      |.+-+..   + .+..+..     -.+++.|..|.+++|+ .++++++++
T Consensus       161 DavSs~g---~-~~l~~d~-----iDv~~tgsQK~L~~pp-Gls~v~vs~  200 (374)
T TIGR01365       161 DATSAAF---A-QDLDYHK-----LDVVTFSWQKVLGGEG-AHGMLILSP  200 (374)
T ss_pred             Eccchhc---C-CCCChhH-----CcEEEEechhccCCCC-ceEEEEECH
Confidence            9998853   2 2233332     2388999999998875 355566543

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>PRK05367 glycine dehydrogenase; Provisional

Probab=98.72  E-value=1.6e-06  Score=87.73  Aligned_cols=150  Identities=19%  Similarity=0.175  Sum_probs=106.1

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-cC--CCCEEEecCCCCcchHH----HHHHcCcEEEEee
Q 021547           91 LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-RL--GAANILLPRPGWPFYES----FAKRNHIEVRHFD  163 (311)
Q Consensus        91 ~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~--g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~~  163 (311)
                      ++++.++++.      +++..++.+..++|.+.++++.++. .+  + ++|++++..|+.+..    .++..|++++.++
T Consensus       125 ~~Qt~la~Lt------G~~~anaSl~d~aTAa~ea~~~a~~~~~~~~-~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~  197 (954)
T PRK05367        125 NFQTMVADLT------GLEIANASLLDEATAAAEAMALAKRVSKSKS-NRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGD  197 (954)
T ss_pred             HHHHHHHHHH------CCChhhccccccHHHHHHHHHHhhhhccCCC-CEEEEcCccCHHHHHHHHHHHHhCCCEEEEec
Confidence            3555566666      4677899999999999998888873 23  4 899999999997664    4567899999987


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      ...      +.+      .+++.++++.+ .|.+|.+.+   +++|+++|+++|+++++|.....+.. ..   +...+.
T Consensus       198 ~~~------d~~------~~~~~~vlvq~-p~~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~-l~---~pge~G  257 (954)
T PRK05367        198 AAK------ALD------HDDVFGVLLQY-PGTSGEVRD---YTALIAAAHARGALVAVAADLLALTL-LT---PPGEMG  257 (954)
T ss_pred             Ccc------CCC------cccEEEEEEec-CCCCeeecc---HHHHHHHHHHcCCEEEEEehhhhccC-CC---ChhhcC
Confidence            532      111      23444454445 478999987   99999999999999999875532221 11   122232


Q ss_pred             CCCCeEEEecCccc-----CCCCcceeeEEEeeC
Q 021547          244 SIVPVITLGSISKR-----WIVPGWRFGWLATND  272 (311)
Q Consensus       244 ~~~~~i~i~s~sK~-----~~~~G~r~G~i~~~~  272 (311)
                         -.|+++|..|+     ||.||  .|++.+.+
T Consensus       258 ---aDi~vgs~qkfg~P~g~GGP~--aGflavr~  286 (954)
T PRK05367        258 ---ADIAVGSAQRFGVPMGFGGPH--AAYFAVRD  286 (954)
T ss_pred             ---CCEEEeeCcccCCCCCCCCCC--EEEEEECH
Confidence               33999999997     66665  88887754

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=98.68  E-value=5e-08  Score=86.87  Aligned_cols=227  Identities=19%  Similarity=0.138  Sum_probs=52.5

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHH-HHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547           62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLAR-RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL  140 (311)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr-~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~  140 (311)
                      +.++++.+++.+.........|.-..|-.--| ..+.+.+..    -..++..+++++...|+.+++.+++ +| .+|++
T Consensus        17 ~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~----ltgAeaA~VvNnnaAAv~L~l~~la-~~-~EvIv   90 (367)
T PF03841_consen   17 PLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCE----LTGAEAALVVNNNAAAVLLALNTLA-KG-KEVIV   90 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccccc-cc-ccccc
Confidence            45677888887776533223443322222122 223333332    2256788899999999999999996 45 57777


Q ss_pred             cCCCCc------chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCC--ccCCCHHHHHHHHHH
Q 021547          141 PRPGWP------FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC--GNVLTYQHLQKIAET  212 (311)
Q Consensus       141 ~~p~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt--G~~~~~~~l~~l~~l  212 (311)
                      ..-.-.      .+.+..+..|.+++.+...    ....+++++++++++|.+++-.+++|-.  |.. ..-.+++++++
T Consensus        91 sRGelVeiGgsFRip~vm~~sGa~lvEVGtt----N~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt-~~~~~~el~~l  165 (367)
T PF03841_consen   91 SRGELVEIGGSFRIPDVMRQSGARLVEVGTT----NRTHLSDYEKAITENTAALLKVHTSNFRIQGFT-GEVSLEELAEL  165 (367)
T ss_dssp             ---------------------------------------------------------------------------HHHHH
T ss_pred             ccccccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccc-ccccHHHHHHH
Confidence            643322      2457888899999888753    2457889999999999999999987642  221 11248999999


Q ss_pred             HHHhCCEEEEeccccCCc----cCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh
Q 021547          213 ARKLGILVIADEVYGHLA----FGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA  288 (311)
Q Consensus       213 ~~~~~~~li~D~ay~~~~----~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~  288 (311)
                      +++||+++++|-.-+.+.    |+-..-..+......+-.++++|--|.+|.|-  .|.|++.        .+++++++.
T Consensus       166 a~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ--aGiI~Gk--------k~lI~~lk~  235 (367)
T PF03841_consen  166 AKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ--AGIIVGK--------KELIEKLKK  235 (367)
T ss_dssp             HHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S---EEEEEE--------HHHHHHHHH
T ss_pred             HhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC--eEEEEeC--------HHHHHHHhh
Confidence            999999999999885432    11001122334444555589999999977665  6888874        258898887


Q ss_pred             h-hccccCCCchhHHHHHhhhh
Q 021547          289 C-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       289 ~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      . ..-..-+..+..+++.+.|+
T Consensus       236 ~pl~RalrvdK~tla~L~atL~  257 (367)
T PF03841_consen  236 HPLGRALRVDKLTLAALEATLR  257 (367)
T ss_dssp             HHHTTT-B--HHHHHHHHHHHH
T ss_pred             CCCcceEeeCHHHHHHHHHHHH
Confidence            6 22234566666666655443

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=98.63  E-value=2.8e-06  Score=77.07  Aligned_cols=181  Identities=18%  Similarity=0.108  Sum_probs=131.8

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh---c--CCC--CEEEecCCCCcchHHHHHHcCcEE
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT---R--LGA--ANILLPRPGWPFYESFAKRNHIEV  159 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~---~--~g~--d~Vl~~~p~~~~~~~~~~~~g~~~  159 (311)
                      ++..++.+++.+++...++-+ +..-=..|+|+|+++.+......   .  .|.  ..++.+...+..+..+++..+.++
T Consensus       116 p~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l  194 (491)
T KOG1383|consen  116 PVVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVEL  194 (491)
T ss_pred             chhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEE
Confidence            466778888888888777655 22333668888988555444432   1  232  468888888999999999999999


Q ss_pred             EEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH-hCCEEEEeccccCCccC--CCCC
Q 021547          160 RHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK-LGILVIADEVYGHLAFG--STPY  236 (311)
Q Consensus       160 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~-~~~~li~D~ay~~~~~~--~~~~  236 (311)
                      ..+++++ .++.+|+....+.+++++.+++...|+.|+|..=+   +++|.++..+ +++.+++|.+-++|.-.  ...+
T Consensus       195 ~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~---ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~  270 (491)
T KOG1383|consen  195 REVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIED---VEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE  270 (491)
T ss_pred             Eeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccchhh---HHHHHHHHHHHhCCceeecccCccccccccccCc
Confidence            9999865 78899999999999999999999999999999865   8888888888 99999999999987642  1111


Q ss_pred             CcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547          237 IPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN  274 (311)
Q Consensus       237 ~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~  274 (311)
                      ..+ .+......=.-.+-+|. |+.--..||++-.+.+
T Consensus       271 ~~f-dFr~p~V~Sisa~~HKY-Gl~~~G~~~vl~r~k~  306 (491)
T KOG1383|consen  271 EEF-DFRVPGVTSISADGHKY-GLAPAGSSWVLYRNKE  306 (491)
T ss_pred             ccc-ccCCCCceeEeecccee-eeeecCcEEEEEcccc
Confidence            111 11111111112245675 7776778999987754

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=98.62  E-value=3.3e-06  Score=76.06  Aligned_cols=175  Identities=20%  Similarity=0.209  Sum_probs=121.4

Q ss_pred             CCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe--CChHHHHHHHH---HHH-hcCC---CCEEEecCCCCcc
Q 021547           80 FNCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDIYIT--LGCMEAVEIIL---TVI-TRLG---AANILLPRPGWPF  147 (311)
Q Consensus        80 ~~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t--~g~~~a~~~~~---~~l-~~~g---~d~Vl~~~p~~~~  147 (311)
                      .+.|.|   .+|+.++...+.+||.+.-|    -|.|.+.  +|+ ++=.+-+   +.. ...|   ++.||+++..|..
T Consensus        95 iHP~~pe~~vqG~l~li~~Lq~~L~~ITG----~DavsLQP~AGA-qGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGT  169 (496)
T COG1003          95 IHPFQPEEQVQGYLELIYELQEWLKEITG----MDAVSLQPNAGA-QGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGT  169 (496)
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHhcC----CceeeccCCCCc-chhhHHHHHHHHHHHHcCCCcCcEEEeeccccCC
Confidence            335554   45888889999999987443    3455543  333 3333222   222 2222   3789999999998


Q ss_pred             hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 021547          148 YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG  227 (311)
Q Consensus       148 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~  227 (311)
                      -...+...|.+++.++.+  +++.+|+++|++.+.+++.++.+++|+. .|..  .+.+.+|+++.+++|-.|..|.+--
T Consensus       170 NPASAam~G~~VV~V~~~--~~G~VDlddLk~k~~~~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANl  244 (496)
T COG1003         170 NPASAAMAGFKVVVVKCD--ENGNVDLDDLRAKAEDNLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANL  244 (496)
T ss_pred             ChhhHhhcCceEEEEecC--CCCCccHHHHHHHhccceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcch
Confidence            899999999999999865  4567999999999999999999999864 4443  4679999999999999999999976


Q ss_pred             CCccCCCCCCcccccCCCCCeEEEecCcccCCCC----cceeeEEEe
Q 021547          228 HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP----GWRFGWLAT  270 (311)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~i~~  270 (311)
                      .-..+-..+      .+.+-.|.=..++|+|..|    |-..|=|.+
T Consensus       245 NA~vG~~rP------Gd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgV  285 (496)
T COG1003         245 NAIVGLARP------GDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGV  285 (496)
T ss_pred             hhhhccccc------cccccceEEeecccccccCCCCCCCCCCceeh
Confidence            543321111      1122225555889988665    444555443

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=98.61  E-value=1.8e-06  Score=87.33  Aligned_cols=183  Identities=18%  Similarity=0.154  Sum_probs=118.3

Q ss_pred             CCcHHHHHHHHHHHhc-CCCCCCCCC--CC----cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-cC
Q 021547           62 RTAAVAEDAIVDSVRS-SMFNCYAPM--FG----LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-RL  133 (311)
Q Consensus        62 ~~~~~~~~a~~~~~~~-~~~~~Y~~~--~g----~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~  133 (311)
                      -.|+.+.+.+.+...- -.+..|.+.  +|    +.++++.+++++      +++.+++.++.++|.+.++++.++. .+
T Consensus       116 ~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt------G~~~anaSL~d~aTAaaea~~~a~~~~~  189 (993)
T PLN02414        116 HVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLT------GLPMSNASLLDEGTAAAEAMAMCNNILK  189 (993)
T ss_pred             cCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHh------CCChhhEeecCChHHHHHHHHHHHhccc
Confidence            4567776777654431 123345542  33    356777777777      5688999999999999998887773 32


Q ss_pred             C-CCEEEecCCCCcchHH----HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHH
Q 021547          134 G-AANILLPRPGWPFYES----FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQK  208 (311)
Q Consensus       134 g-~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~  208 (311)
                      | .++|++++..|+.+..    .++..|++++.++....     +      ...+...+++ .+-.|.+|.+.+   +++
T Consensus       190 g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~v~~vl-vq~P~~~G~v~d---v~~  254 (993)
T PLN02414        190 GKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGDVCGVL-VQYPATDGEVLD---YAE  254 (993)
T ss_pred             CCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCceEEEE-EecCCCCeEEcC---HHH
Confidence            2 2789999999998754    44557889888875321     1      1122233333 333456999988   999


Q ss_pred             HHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC---CCCcceeeEEEeeC
Q 021547          209 IAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW---IVPGWRFGWLATND  272 (311)
Q Consensus       209 l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~---~~~G~r~G~i~~~~  272 (311)
                      |+++|+++|+++++ .+... ...  ...+...+.   -.|++++..|+.   |..|-+.|++.+.+
T Consensus       255 I~~~ah~~GaL~iV-aad~l-al~--~l~~pge~G---ADi~vgsgqKwg~P~G~GGP~aGflavr~  314 (993)
T PLN02414        255 FVKNAHANGVKVVM-ATDLL-ALT--MLKPPGEWG---ADIVVGSAQRFGVPMGYGGPHAAFLATSQ  314 (993)
T ss_pred             HHHHHHHcCCEEEE-EECHH-Hhc--CCCCHhhcc---CcEEEECCCccccCCCCCCCCeeEEEECH
Confidence            99999999999999 44432 111  111222332   338899999984   12345589988854

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=98.55  E-value=6.2e-06  Score=71.74  Aligned_cols=205  Identities=16%  Similarity=0.104  Sum_probs=128.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHH---hcCCCCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSV---RSSMFNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG  118 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~---~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g  118 (311)
                      .+.++|.++.+.-+    ..++....+..+...   ......++. ....-..+-+.+.+.+....  +..+.+++++.+
T Consensus        28 lp~~viyLdgnSLG----a~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLi--GA~~~Evvv~dt  101 (407)
T COG3844          28 LPGGVIYLDGNSLG----ARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLI--GARAGEVVVTDT  101 (407)
T ss_pred             CCCCeEEeeccccc----cCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhh--cCCCCceEEeCC
Confidence            37889999988733    222223333333332   221111122 12233344444555554322  457789999999


Q ss_pred             hHHHHHHHHHHHhc--CCCCEEEecCCCCcch-----HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEe
Q 021547          119 CMEAVEIILTVITR--LGAANILLPRPGWPFY-----ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVII  191 (311)
Q Consensus       119 ~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~  191 (311)
                      ++-.++.++.+..+  +| ++|++++-.-.+.     ...+...+..   ++    -...+.++++++++++++..++++
T Consensus       102 ts~nl~k~L~aalr~~~~-r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~----~~~~~~P~~~~~~~~dd~AvV~L~  173 (407)
T COG3844         102 TSINLFKVLAAALRPQEG-RRVIVSEGDNFPTDLYIAEGLADLLGIG---YD----LEGVIAPRALEEAITDDVAVVLLS  173 (407)
T ss_pred             cchHHHHHHHHHhccCCC-ceEEeecCCCCCcchhhhcchhhhhccc---cc----ceeeeChHHHHHhhccceEEEEec
Confidence            98888877777654  57 7888775433322     2233444433   11    112356779999999999999999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCC-CcceeeEEEe
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIV-PGWRFGWLAT  270 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~i~~  270 (311)
                      +.++-||+.++   +.+|.+++++++++++-|-+|+.    |.-+..+.   ..+..+-|++..|.++. ||-. +++.+
T Consensus       174 ~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsa----Gavp~~Lh---~~gaDfaigcsyKYLNgGPGap-a~l~v  242 (407)
T COG3844         174 HVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSA----GAVPVDLH---AAGADFAIGCSYKYLNGGPGAP-AGLFV  242 (407)
T ss_pred             cccccccceee---HHHHHHHHHhcCceEEeehhccc----CCcceeec---ccCCCeeeeeeceeccCCCCCc-eeEEe
Confidence            99999999999   99999999999999999999986    22222222   23334889999998765 5544 44444


Q ss_pred             eC
Q 021547          271 ND  272 (311)
Q Consensus       271 ~~  272 (311)
                      .+
T Consensus       243 ~~  244 (407)
T COG3844         243 AP  244 (407)
T ss_pred             cc
Confidence            43

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=98.33  E-value=2.2e-05  Score=70.57  Aligned_cols=196  Identities=13%  Similarity=0.074  Sum_probs=119.1

Q ss_pred             HHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-------CC----CC
Q 021547           68 EDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR-------LG----AA  136 (311)
Q Consensus        68 ~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~-------~g----~d  136 (311)
                      .+.+...+..+.+ -|...++..-..+.+-..+.+-.||....|.|+--.|+.+.+++...+--+       .|    .+
T Consensus       119 g~wlT~t~Ntn~~-TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~  197 (510)
T KOG0629|consen  119 GEWLTSTANTNMF-TYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPP  197 (510)
T ss_pred             HHHHHhccCCCCc-eEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCc
Confidence            3344433333333 577666766666667666666678877766666666666666654443311       12    13


Q ss_pred             EEE-ecCCCCcchHHHHHHcCcE---EEEeeccCCCCcccCHHHHHhhcCC-Cc----cEEEEeCC-CCCCccCCCHHHH
Q 021547          137 NIL-LPRPGWPFYESFAKRNHIE---VRHFDLLPERGWEVDLEAVEALADE-NT----AAIVIINP-CNPCGNVLTYQHL  206 (311)
Q Consensus       137 ~Vl-~~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~-~~----~~i~i~~p-~nptG~~~~~~~l  206 (311)
                      -|+ .+.-+|.+....+..+|+.   ++.++.  ...+++++++||+.+.. +.    +.++-++. +.-.|..-|   |
T Consensus       198 lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t--~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L  272 (510)
T KOG0629|consen  198 LILFTSEESHYSIKKAAAFLGLGTDHCIKVKT--DERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---L  272 (510)
T ss_pred             EEEEecccchhhHHHHHHHhccCCceeEEecc--cccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---H
Confidence            344 4567788888999999954   555543  35578999999996542 22    23332232 456777766   9


Q ss_pred             HHHHHHHHHhCCEEEEeccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          207 QKIAETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       207 ~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      ..++++|++|++|+++|.+|++ +....+...-+...... + =+..+.+|..| ..+.++.++...
T Consensus       273 ~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera-~-SvtwnpHK~~g-aplqCsa~l~r~  336 (510)
T KOG0629|consen  273 NGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERA-N-SVTWNPHKLMG-APLQCSAFLTRE  336 (510)
T ss_pred             HHHHHHHHhcCEEEEeecccccccccChhhHhhccCcccc-C-ceeecHHHhhc-CcchhhHHHHHH
Confidence            9999999999999999999997 33221111111111111 1 34458899865 457777776644

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=98.32  E-value=1.1e-05  Score=73.26  Aligned_cols=173  Identities=11%  Similarity=0.118  Sum_probs=114.0

Q ss_pred             CCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHHHHHhhcCCCCC--------CCCCEEEeCChHHH
Q 021547           54 DPAAFPCFRTAAVAEDAIVDSVRSS---MFNCYAPMFGLPLARRAVAEYLNRDLPYKL--------SADDIYITLGCMEA  122 (311)
Q Consensus        54 ~p~~~~~~~~~~~~~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~--------~~~~v~~t~g~~~a  122 (311)
                      +|.++..+|....+...+.+.+...   -.+.+...+-.+||+.-+.+|+.+..+++.        .+--|+.++.+-..
T Consensus        73 hP~fhAyfpa~~s~~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~  152 (511)
T KOG0628|consen   73 HPHFHAYFPAGNSYPSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESV  152 (511)
T ss_pred             CCceeeEccCccchHHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhH
Confidence            5665556777555556666655432   122455666789999999999998777543        22234444443333


Q ss_pred             HHHHHHHHh------cCC-----------CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC-
Q 021547          123 VEIILTVIT------RLG-----------AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN-  184 (311)
Q Consensus       123 ~~~~~~~l~------~~g-----------~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-  184 (311)
                      +-+++.+-.      +.+           .=.+.+.+..|.+....+...+.+...++.+  .++.++.+.|++++.++ 
T Consensus       153 lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~VklR~l~td--~n~~mr~~~L~~AIe~D~  230 (511)
T KOG0628|consen  153 LVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGVKLRALPTD--ENFGMRGDTLRKAIEEDI  230 (511)
T ss_pred             HHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcceeEEEeecc--cCcCCCHHHHHHHHHHHH
Confidence            333333321      111           0135678899999999999999998888764  38999999999988652 


Q ss_pred             ----ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547          185 ----TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA  230 (311)
Q Consensus       185 ----~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~  230 (311)
                          ++.+++.+.. .|| ...-+++.+|..+|+++|+|+++|.+|++-.
T Consensus       231 arGlIPf~v~at~G-TT~-~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa  278 (511)
T KOG0628|consen  231 ARGLIPFFVCATLG-TTS-SCAFDELEELGPVCREEGLWLHVDAAYAGSA  278 (511)
T ss_pred             hCCCccEEEEEeec-Ccc-ccccccHHHhcchhhhcCEEEEeehhhcccc
Confidence                2333333332 122 2344579999999999999999999999643

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=98.19  E-value=1.8e-05  Score=69.73  Aligned_cols=138  Identities=20%  Similarity=0.157  Sum_probs=105.4

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCC----CCEEEecCCCCc-chHHHHHHcC
Q 021547           82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLG----AANILLPRPGWP-FYESFAKRNH  156 (311)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g----~d~Vl~~~p~~~-~~~~~~~~~g  156 (311)
                      .|+.+.++..|+.++.+.+.        -+.++.|+-+..|-++++..+++++    ..+.++++..|. ......+..|
T Consensus        74 AYagsrs~~~L~~avkdifG--------fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng  145 (471)
T COG3033          74 AYAGSRSYYALADAVKDIFG--------FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQING  145 (471)
T ss_pred             hhcccccHHHHHHHHHHhcC--------ceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcC
Confidence            59988999999999999882        3678889999999888888887644    044445555554 4456677788


Q ss_pred             cEEEEeeccCCC--------CcccCHHHHHhhcCC----CccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547          157 IEVRHFDLLPER--------GWEVDLEAVEALADE----NTAAIVIINP-CNPCGNVLTYQHLQKIAETARKLGILVIAD  223 (311)
Q Consensus       157 ~~~~~~~~~~~~--------~~~~d~~~l~~~l~~----~~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~~~~li~D  223 (311)
                      ..++.++.+...        .+.+|++.|++.+++    +...|+++.. |.-.|+..|.+.+++..++|++|++.++.|
T Consensus       146 ~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~D  225 (471)
T COG3033         146 ATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMD  225 (471)
T ss_pred             CccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEee
Confidence            887777654321        246899999998864    5666666644 558889999999999999999999999999


Q ss_pred             cccc
Q 021547          224 EVYG  227 (311)
Q Consensus       224 ~ay~  227 (311)
                      .+-.
T Consensus       226 a~Rf  229 (471)
T COG3033         226 AARF  229 (471)
T ss_pred             hhhh
Confidence            8754

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=98.09  E-value=3e-05  Score=69.90  Aligned_cols=183  Identities=16%  Similarity=0.156  Sum_probs=108.2

Q ss_pred             HHHHHHHHHhhcCCCCCCCCCEEEeCChHHH-HHHHHHHHh-cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCC
Q 021547           92 ARRAVAEYLNRDLPYKLSADDIYITLGCMEA-VEIILTVIT-RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERG  169 (311)
Q Consensus        92 lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a-~~~~~~~l~-~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  169 (311)
                      |...++..+-+..|.. +....++.+-+|.. +.+.+.++. ++.++.|+.+.-.+......+...|++++.++.....+
T Consensus        57 ltn~l~~d~~~~~G~~-~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d  135 (389)
T PF05889_consen   57 LTNSLVLDALRLAGLR-SVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGD  135 (389)
T ss_dssp             HHHHHHHHHHHHTTHT-THCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETT
T ss_pred             HHHHHHHHHHHHcCCc-cccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCC
Confidence            4444444444445643 23456676666543 445555553 34449999999888888899999999999998654333


Q ss_pred             -cccCHHHHHhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC--
Q 021547          170 -WEVDLEAVEALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG--  243 (311)
Q Consensus       170 -~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~--  243 (311)
                       ...|++.+++.++   +...+.+++++..-.|...+  ++++|+++|++||+..|+.++|+-=.     ...+..+.  
T Consensus       136 ~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D--~i~~IakiC~~~~IPhlvNnAYgvQ~-----~~~~~~i~~a  208 (389)
T PF05889_consen  136 ELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPD--DIEEIAKICKEYDIPHLVNNAYGVQS-----SKCMHLIQQA  208 (389)
T ss_dssp             EEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT------HHHHHHHHHH
T ss_pred             eeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCc--cHHHHHHHHHHcCCceEEccchhhhH-----HHHHHHHHHH
Confidence             4556777777664   35567777777655555433  69999999999999999999999510     00000000  


Q ss_pred             -CCCC-eEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547          244 -SIVP-VITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       244 -~~~~-~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  290 (311)
                       ..++ .+++.|+-|.|-.| ..-+.|..+++       ..+..+...+
T Consensus       209 ~~~GRvda~vqS~dkNF~VP-vGgai~As~~~-------~~i~~vs~~Y  249 (389)
T PF05889_consen  209 WRVGRVDAFVQSTDKNFMVP-VGGAIMASFDP-------SGILAVSKEY  249 (389)
T ss_dssp             HHHSTCSEEEEEHHHHHCEE-SSHEEEEESSH-------HHHHHHHHTS
T ss_pred             HhcCCcceeeeecCCCEEec-CCCcEEEecCH-------HHHHHHHHHh
Confidence             0111 27899999998654 33344544443       3666666543

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=97.99  E-value=0.00046  Score=63.69  Aligned_cols=153  Identities=25%  Similarity=0.373  Sum_probs=87.8

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh---cCCCCEEEecCCCCcchHH----HHHHcCcEEEEee
Q 021547           91 LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT---RLGAANILLPRPGWPFYES----FAKRNHIEVRHFD  163 (311)
Q Consensus        91 ~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~---~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~~  163 (311)
                      ++...+++..    |  ++.-+.-+-.|++.+-++++.+..   +++ ++|+++...|+.+..    .+...|++++.++
T Consensus       114 e~Qs~i~eLT----G--mdvaNaSlyd~atA~aEa~~ma~r~~~~~~-~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~  186 (429)
T PF02347_consen  114 EYQSMICELT----G--MDVANASLYDGATAAAEAMLMAVRATKRKR-NKVLVPESLHPQTRAVLRTYAAPLGIEIVEVP  186 (429)
T ss_dssp             HHHHHHHHHH----T--SSEE-SEBSSCCHHHHHHHHHHHHHHTT----EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-
T ss_pred             HHHHHHHHhh----C--CCccCCCCCChhHHHHHHHHHHHHhcccCC-cEEEEcCCcChhhHHHHHHhhhhCCeEEEEec
Confidence            3444455554    3  333344566788877777666653   233 599999999998876    4555788999888


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      ....  ...|        ++++.++++.+||+ .|.+-+   +++|.++++++|.++++ .+-- +...+.  .+...+.
T Consensus       187 ~~~~--~~~d--------~~~~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~-~ad~-~aL~~l--~~Pge~G  248 (429)
T PF02347_consen  187 LDED--GTTD--------DDDTAAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV-GADP-NALGGL--KSPGEYG  248 (429)
T ss_dssp             BBTT--CSB---------STTEEEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE-CGGC-CGCCTC----GGGGT
T ss_pred             cccc--CCcc--------ccCeEEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE-ecCH-HHHhCc--CChhhcC
Confidence            6532  2223        67899999999874 777766   99999999999999887 3322 222221  1112222


Q ss_pred             CCCCeEEEecCcccCCCC----cceeeEEEeeC
Q 021547          244 SIVPVITLGSISKRWIVP----GWRFGWLATND  272 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~----G~r~G~i~~~~  272 (311)
                      .   .|.+++ +|.||.|    |--.|++.+.+
T Consensus       249 A---DI~vg~-~Q~fg~p~~~GGP~~G~~a~~~  277 (429)
T PF02347_consen  249 A---DIVVGE-HQTFGIPMGFGGPGAGFFAVRE  277 (429)
T ss_dssp             ----SEEEEC-CTTTT---CCC-S--EEEEE-G
T ss_pred             c---cEEeeC-CCCCcccCCCCCCCeeeEEEhh
Confidence            2   266655 8888776    56677777643

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=97.84  E-value=0.0022  Score=64.79  Aligned_cols=139  Identities=15%  Similarity=0.198  Sum_probs=91.5

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCC-----CCCcH----HHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-
Q 021547           62 RTAAVAEDAIVDSVRSSMFNCYAP-----MFGLP----LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-  131 (311)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~-----~~g~~----~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-  131 (311)
                      ..|+.+.+.+.+.  .+.+..|.|     ++|.-    ++++.++++.      +++..|.-+..++|.+.++++.+.. 
T Consensus        77 ~~p~~i~r~v~~~--p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt------Gm~~aNaSl~d~atA~aEa~~~a~~~  148 (939)
T TIGR00461        77 ILPPVIQRNLLEN--PGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT------GLPVANASLLDEGTAAAEAMALSFNV  148 (939)
T ss_pred             cCChHHHHHHHhC--chhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH------CCChhhhhccchhhHHHHHHHHHHHh
Confidence            3566666554432  112334544     23332    3445555555      3455677788888888887776643 


Q ss_pred             --cCCCCEEEecCCCCcchHHH----HHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHH
Q 021547          132 --RLGAANILLPRPGWPFYESF----AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQH  205 (311)
Q Consensus       132 --~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~  205 (311)
                        +++ ++|++++..|+.+...    ++..|++++.++          .++|++.+  ++.++++.+|+ -.|.+.+   
T Consensus       149 ~~~~~-~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~--~~~~v~~q~Pn-~~G~ied---  211 (939)
T TIGR00461       149 SKKKA-NKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV--DVFGCLLQYPA-TDGSILD---  211 (939)
T ss_pred             hcCCC-CEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC--CEEEEEEECCC-CCeEEec---
Confidence              234 7999999999887643    457888888763          34566555  46677777775 5788765   


Q ss_pred             HHHHHHHHHHhCCEEEEecc
Q 021547          206 LQKIAETARKLGILVIADEV  225 (311)
Q Consensus       206 l~~l~~l~~~~~~~li~D~a  225 (311)
                      +++|+++++++|.+++++.-
T Consensus       212 ~~~i~~~~h~~gal~~~~ad  231 (939)
T TIGR00461       212 YKQLIDALHSHKSLVSVAAD  231 (939)
T ss_pred             HHHHHHHHHHcCCEEEEEec
Confidence            99999999999999998443

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=97.80  E-value=0.00086  Score=59.53  Aligned_cols=194  Identities=14%  Similarity=0.106  Sum_probs=113.9

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCC--CCcHHHHHHHHHHHh----hcCCCCCCCC--CEEEeCChHHHHHHHHHHHhcCC
Q 021547           63 TAAVAEDAIVDSVRSSMFNCYAPM--FGLPLARRAVAEYLN----RDLPYKLSAD--DIYITLGCMEAVEIILTVITRLG  134 (311)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~l~----~~~g~~~~~~--~v~~t~g~~~a~~~~~~~l~~~g  134 (311)
                      ++.++.+++...+.+-..-+|+..  .|-.++...+.-++.    +-|+.+-..-  ||..-+| +.|..++..++++|+
T Consensus        52 ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SG-SPANfavYtall~Ph  130 (477)
T KOG2467|consen   52 TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSG-SPANFAVYTALLKPH  130 (477)
T ss_pred             hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCC-CchhhHHHhhhcCCC
Confidence            467788888777643111122210  111233333322222    2233322222  4444454 678999999999999


Q ss_pred             CCEEEe---cCCCCcc--hHHHHHHcCcE-----EEEeeccCCCCcccCHHHHHhhc-CCCccEEEEeCCCCCCccCCCH
Q 021547          135 AANILL---PRPGWPF--YESFAKRNHIE-----VRHFDLLPERGWEVDLEAVEALA-DENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       135 ~d~Vl~---~~p~~~~--~~~~~~~~g~~-----~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~~  203 (311)
                       ++|.-   |+..|-.  |..-.+...+.     --++.+++ .++-+|.|.||+.. .=++++++.-...++-  .++ 
T Consensus       131 -~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~-~TG~IDYD~Le~~A~~frPk~iiaG~SaY~R--~~D-  205 (477)
T KOG2467|consen  131 -ERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDP-STGYIDYDKLEKTATLFRPKLIIAGTSAYSR--LID-  205 (477)
T ss_pred             -CeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCC-CCCceehHHHHHHHHhcCCcEEEeccccchh--hcc-
Confidence             99884   3334432  11111111111     11223322 45679999998844 3467776644434333  344 


Q ss_pred             HHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          204 QHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                        ..++-++|.+-|.+++.|.+|- +++-.+.-+.|+...|     |+..+.+|+  +-|-|-|.|...
T Consensus       206 --YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~D-----iVTTTTHKs--LRGPRg~mIFyR  265 (477)
T KOG2467|consen  206 --YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCD-----IVTTTTHKS--LRGPRGAMIFYR  265 (477)
T ss_pred             --HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccc-----eeecccccc--ccCCcceeEEEe
Confidence              6777788889999999999995 5666666667776544     899999997  678888888774

>PLN02672 methionine S-methyltransferase

Probab=97.71  E-value=0.00077  Score=68.98  Aligned_cols=219  Identities=9%  Similarity=0.020  Sum_probs=139.0

Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh------cCCCCEEEe
Q 021547           67 AEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT------RLGAANILL  140 (311)
Q Consensus        67 ~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~------~~g~d~Vl~  140 (311)
                      +...+...++++.++.|.++.|...+|+.|+.|++..+++++++++|++.++-..|++.+++.+.      +.+ .+   
T Consensus       406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---  481 (1082)
T PLN02672        406 FLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEH-LT---  481 (1082)
T ss_pred             HHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhh-hh---
Confidence            34566667777778899999999999999999999999999999999999999999988887763      222 11   


Q ss_pred             cCCCCcchHHHHHHcC--------cEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHH
Q 021547          141 PRPGWPFYESFAKRNH--------IEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAE  211 (311)
Q Consensus       141 ~~p~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~  211 (311)
                       ..-...+...+...+        -.+..+.-..      ..+.+.+++++ ++++++..-..   +-..+....+.|++
T Consensus       482 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  551 (1082)
T PLN02672        482 -RWLPKKWLTSLAIENATSDSKSDDVITVIEAPR------QSDLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLLN  551 (1082)
T ss_pred             -ccCCHHHHhHhhhhcccccCccCCeEEEEeCCC------cchHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHHH
Confidence             111112222222222        2233332111      11233444443 55555544333   22345556899999


Q ss_pred             HHHHhCCEEEEeccccC-CccCCCCCCccccc---CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHh
Q 021547          212 TARKLGILVIADEVYGH-LAFGSTPYIPMGVF---GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIK  287 (311)
Q Consensus       212 l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~---~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~  287 (311)
                      .+++.|.+++.|.+-.. +.-...+...+.-+   .......++.++-|+--.+.+-+++++.-+ +      .+.+.+.
T Consensus       552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~  624 (1082)
T PLN02672        552 VTAEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISEN-E------AVLKALS  624 (1082)
T ss_pred             HHHhhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCc-H------HHHHHHH
Confidence            99999999999988653 32111111112111   112245788899999888999999998533 2      2555555


Q ss_pred             hhhc-cccCCCchhHHHHHh
Q 021547          288 ACLG-VRSGPSTLIQVCEMF  306 (311)
Q Consensus       288 ~~~~-~~~~~~~~~q~~~~~  306 (311)
                      .... ..+..+.++|+-..-
T Consensus       625 ~~~~~~~~~~~~~~~~~~~~  644 (1082)
T PLN02672        625 KTGEVLEGRTAIISQFYYGC  644 (1082)
T ss_pred             HHHHhhccchHHHHHHHHHH
Confidence            5544 335778888876543

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=97.68  E-value=0.00016  Score=62.44  Aligned_cols=226  Identities=14%  Similarity=0.138  Sum_probs=129.4

Q ss_pred             CCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh---cCCCCE
Q 021547           62 RTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT---RLGAAN  137 (311)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~---~~g~d~  137 (311)
                      -++|.+.++....++.... .++-.    .++.+-....... ..   .-+-+++++++++|..++++...   +.. | 
T Consensus        61 hchp~VV~A~~kQmat~~tN~RFlh----d~lv~cA~~l~st-lP---eLsvc~F~NSGSEANDLALRLAR~ftkhq-D-  130 (452)
T KOG1403|consen   61 HCHPEVVRAGAKQMATISTNNRFLH----DELVQCARTLTST-LP---ELSVCFFVNSGSEANDLALRLARNFTKHQ-D-  130 (452)
T ss_pred             cCCHHHHHHHHHHHhHhcccchhhH----HHHHHHHHHHhhc-CC---CceEEEEecCCchhhHHHHHHHHhhcccC-c-
Confidence            4678888888887764322 12222    3344333333322 11   23567899999999999888764   344 5 


Q ss_pred             EEecCCCCcchHH-HHHHcC-----------cEEEEeeccCC---CCcc-----------cCHHHHHhhcC----CCcc-
Q 021547          138 ILLPRPGWPFYES-FAKRNH-----------IEVRHFDLLPE---RGWE-----------VDLEAVEALAD----ENTA-  186 (311)
Q Consensus       138 Vl~~~p~~~~~~~-~~~~~g-----------~~~~~~~~~~~---~~~~-----------~d~~~l~~~l~----~~~~-  186 (311)
                      |++-+..|.+... ..+..-           ..++.+-+.++   ..+.           .=.+.+++.++    ...+ 
T Consensus       131 vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gv  210 (452)
T KOG1403|consen  131 VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGV  210 (452)
T ss_pred             eEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcH
Confidence            4444445543221 111111           11222211111   0000           11123333332    2211 


Q ss_pred             EEEEe-CCCCCCccCCCHHH-HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce
Q 021547          187 AIVII-NPCNPCGNVLTYQH-LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR  264 (311)
Q Consensus       187 ~i~i~-~p~nptG~~~~~~~-l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r  264 (311)
                      +.++. +-+.=.|+++|+.. .++.++..+.+|-..|.||+.-+|..-|..++.+..++--++++   ++.|.. ..|.+
T Consensus       211 AAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIV---tmgKpm-GNGhP  286 (452)
T KOG1403|consen  211 AAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIV---TMGKPM-GNGHP  286 (452)
T ss_pred             HHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchh---eecccC-CCCCe
Confidence            22333 33555677776665 78899999999999999999998876677777776665444444   778884 58999


Q ss_pred             eeEEEeeCCCCccchhhHHHHHhhh---hccccCCCchhHHHHHhhhh
Q 021547          265 FGWLATNDPNGVLQKSGIVGSIKAC---LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       265 ~G~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++.++...        ++.+.+..-   +.-+.+.||.+.++..+.++
T Consensus       287 Va~Vattk--------eIA~Af~atgv~YFNTyGGnPVsCAv~laVm~  326 (452)
T KOG1403|consen  287 VAAVATTK--------EIAQAFHATGVEYFNTYGGNPVSCAVGLAVMR  326 (452)
T ss_pred             eeEEeccH--------HHHHHhccccceehhccCCCchhHHHHHHHHH
Confidence            99988743        255655541   11246789999988877654

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=97.25  E-value=0.0098  Score=53.10  Aligned_cols=201  Identities=13%  Similarity=0.066  Sum_probs=104.8

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC-----CCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC-----YAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYITLG  118 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~-----Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g  118 (311)
                      +.+.||+.|- .     ..|+++++..+..+....-.+     -++ +.-...+-+...+.+++.++++-+-+=+++-.|
T Consensus         4 ~~~~nFsaGP-a-----~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGG   77 (365)
T COG1932           4 PRVYNFSAGP-A-----ALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGG   77 (365)
T ss_pred             CCCCCCCCCc-c-----cCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCc
Confidence            5678999994 2     345666666655543211101     111 222233444444455555555544433344566


Q ss_pred             hHHHHHHHHHHHhcCCCCEEEecCCCCcch-HHHHHHcCcEEEEeecc-CCCCc--ccCHHHHHhhcCCCccEEEEeCCC
Q 021547          119 CMEAVEIILTVITRLGAANILLPRPGWPFY-ESFAKRNHIEVRHFDLL-PERGW--EVDLEAVEALADENTAAIVIINPC  194 (311)
Q Consensus       119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~-~~~~~~~g~~~~~~~~~-~~~~~--~~d~~~l~~~l~~~~~~i~i~~p~  194 (311)
                      +|..+.++...|+.++ ..-.+..-.|... ...++..+-.+...... ...++  -++++...  +.++..-+.+|.-.
T Consensus        78 at~qf~~~p~nLl~~~-~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~Ne  154 (365)
T COG1932          78 ATGQFAMAPMNLLGKR-GTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNE  154 (365)
T ss_pred             cHHHHHHHHHhhhccc-CceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCC
Confidence            6888999999998655 3212334444432 23444444322222111 11221  22222222  33333336666555


Q ss_pred             CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      .-+|+.++  +...+..     +.++|.|.+..-+.    ....+..++     ++..|.-|.+|..|  ++.+|++.
T Consensus       155 Ti~Gv~v~--~~p~~~~-----~~~~v~D~SS~ils----r~iDvsk~d-----viyagaQKnlGpaG--ltvvIvr~  214 (365)
T COG1932         155 TISGVEVP--ELPDIGS-----DGLLVADASSAILS----RPIDVSKYD-----VIYAGAQKNLGPAG--LTVVIVRP  214 (365)
T ss_pred             cccceEcc--CCCCCCC-----CceEEEecccHHhc----CCCChhHcc-----eEEEehhhccCccc--eEEEEEcH
Confidence            67788766  2222221     37889998877543    223444443     77789999999999  77777753

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=97.08  E-value=0.089  Score=48.08  Aligned_cols=142  Identities=25%  Similarity=0.342  Sum_probs=88.8

Q ss_pred             CCEEEeCChHHHHHHHHHHHh---cCCCCEEEecCCCCcchHHHHH----HcCcEEEEeeccCCCCcccCHHHHHhhcCC
Q 021547          111 DDIYITLGCMEAVEIILTVIT---RLGAANILLPRPGWPFYESFAK----RNHIEVRHFDLLPERGWEVDLEAVEALADE  183 (311)
Q Consensus       111 ~~v~~t~g~~~a~~~~~~~l~---~~g~d~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~  183 (311)
                      -|--+--++|.+-++.+.+..   ++. .+++++..+|+.+...++    -.|.+++.++..       |.+++++....
T Consensus       138 ANASm~DeaTAaAEAm~ma~r~~k~k~-~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~~~~  209 (450)
T COG0403         138 ANASMLDEATAAAEAMLMAKRVTKKKR-NKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESADDG  209 (450)
T ss_pred             ccchhhhhHHHHHHHHHHHHHhhcCcC-ceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhcccc
Confidence            344455667766666655553   234 899999999998765444    455666666542       77888888334


Q ss_pred             CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe-ccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC-
Q 021547          184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD-EVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP-  261 (311)
Q Consensus       184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D-~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-  261 (311)
                      ++-++++..|+ -.|..  .+++.++.+.+++++.++++= |.-+.....  ++   ..+.   -.|++++..-. |.| 
T Consensus       210 ~~~gv~vQyP~-~~G~~--~~d~~~l~~~~h~~~al~~v~aDplaL~LL~--pP---Ge~G---ADIvvG~~Qrf-GvPm  277 (450)
T COG0403         210 DVFGVLVQYPN-TFGIV--EEDLRALIEAAHSAGALVIVAADPLALGLLK--PP---GEFG---ADIVVGSAQRF-GVPM  277 (450)
T ss_pred             CeEEEEEecCC-CCCcc--chhHHHHHHHHhhcCCEEEEEechhHhhccC--Cc---cccC---CceEEecCccc-CCCc
Confidence            77888888887 45532  336999999999998776652 111110000  11   1222   23788776664 554 


Q ss_pred             ---cceeeEEEeeC
Q 021547          262 ---GWRFGWLATND  272 (311)
Q Consensus       262 ---G~r~G~i~~~~  272 (311)
                         |-.+||..+.+
T Consensus       278 gfGGPhag~fA~~~  291 (450)
T COG0403         278 GFGGPHAGYFAVKD  291 (450)
T ss_pred             CCCCcceeeeeEhH
Confidence               56778877643

>PRK12566 glycine dehydrogenase; Provisional

Probab=95.91  E-value=0.56  Score=47.86  Aligned_cols=92  Identities=14%  Similarity=0.119  Sum_probs=61.1

Q ss_pred             CEEEeCChHHHHHHHHHHHh---cCCCCEEEecCCCCcchHHHH----HHcCcEEEEeeccCCCCcccCHHHHHhhcCCC
Q 021547          112 DIYITLGCMEAVEIILTVIT---RLGAANILLPRPGWPFYESFA----KRNHIEVRHFDLLPERGWEVDLEAVEALADEN  184 (311)
Q Consensus       112 ~v~~t~g~~~a~~~~~~~l~---~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~  184 (311)
                      |--+-.++|.+-++++.+..   ++. .+|+++...|+.+...+    +..|++++.             +++++.+.++
T Consensus       143 NASl~D~atA~aEA~~ma~~~~~~k~-~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~~  208 (954)
T PRK12566        143 NASLLDEATAAAEAMALAKRVAKSKS-NRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAHA  208 (954)
T ss_pred             hhhhccchhHHHHHHHHHHHHhhcCC-CEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCCC
Confidence            44444566655554444442   234 68999999998876543    345555553             3344455567


Q ss_pred             ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547          185 TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI  221 (311)
Q Consensus       185 ~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li  221 (311)
                      +.++++.+|+ -.|.+.+   ++++.+++++.|.+++
T Consensus       209 ~~~v~vq~P~-~~G~i~d---~~~i~~~~h~~gal~~  241 (954)
T PRK12566        209 VFGALLQYPD-THGEIRD---LRPLIDQLHGQQALAC  241 (954)
T ss_pred             EEEEEEECCC-CceEEcc---HHHHHHHHHHcCCEEE
Confidence            7888888886 4777754   9999999999988755

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=95.62  E-value=0.33  Score=42.62  Aligned_cols=208  Identities=13%  Similarity=0.032  Sum_probs=129.0

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCC-------CCcHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-MFNCYAPM-------FGLPLARRAVAEYLNRDLPYKLSADDIYI  115 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~-~~~~Y~~~-------~g~~~lr~~ia~~l~~~~g~~~~~~~v~~  115 (311)
                      ..++|.|..++-++     .|..+...|.+.++.. ...-|+..       .+.......++...      +...++|.+
T Consensus        65 d~~~iYlcGNSLGL-----mPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV------GA~e~Evav  133 (465)
T KOG3846|consen   65 DKPVIYLCGNSLGL-----MPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV------GAQENEVAV  133 (465)
T ss_pred             CCCeEEEecccccc-----CchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc------cCCchhhhh
Confidence            56778887776432     3456666666555421 01112211       12344555555555      457789999


Q ss_pred             eCChHHHHHHHHHHHhcCC--CCEEEecCCCCcc----hHHHHHHcCcEEE----EeeccCCCCcccCHHHHHhhcCC--
Q 021547          116 TLGCMEAVEIILTVITRLG--AANILLPRPGWPF----YESFAKRNHIEVR----HFDLLPERGWEVDLEAVEALADE--  183 (311)
Q Consensus       116 t~g~~~a~~~~~~~l~~~g--~d~Vl~~~p~~~~----~~~~~~~~g~~~~----~~~~~~~~~~~~d~~~l~~~l~~--  183 (311)
                      .++-|-.+..++.++.+|.  +-+||+..-.|++    +...++..|+.+.    .+.. .+..-.+..+++.+.+..  
T Consensus       134 mNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~ieP-REGEetlRteDILd~IEkng  212 (465)
T KOG3846|consen  134 MNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEP-REGEETLRTEDILDTIEKNG  212 (465)
T ss_pred             HhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecc-cccccchhHHHHHHHHHhcC
Confidence            9999999999998887653  1578888777663    4567777777532    2322 123334566666665543  


Q ss_pred             -CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547          184 -NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG  262 (311)
Q Consensus       184 -~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G  262 (311)
                       ...+++++..+.-||+.++   +.+|-..-+..|+++=.|-+|+.    |.-+..+..   -+..+-++..-|......
T Consensus       213 DeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAv----gNVpL~LHd---WgVDFACWCSYKYlnaGa  282 (465)
T KOG3846|consen  213 DEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHAV----GNVPLQLHD---WGVDFACWCSYKYLNAGA  282 (465)
T ss_pred             CeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhhh----cCCceEEee---cCCceEEEeeecccccCC
Confidence             4555677778999999999   88887666667999999999985    111222222   223377888888754433


Q ss_pred             ceeeEEEeeCC
Q 021547          263 WRFGWLATNDP  273 (311)
Q Consensus       263 ~r~G~i~~~~~  273 (311)
                      -.+|-+.+++.
T Consensus       283 GgIgGlFvHek  293 (465)
T KOG3846|consen  283 GGIGGLFVHEK  293 (465)
T ss_pred             Cccceeeeehh
Confidence            45666666554

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=95.39  E-value=0.29  Score=47.21  Aligned_cols=134  Identities=15%  Similarity=0.115  Sum_probs=89.8

Q ss_pred             CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe-CChHHHHHH---HHHHH-hcCC--C-CEEEecCCCCcchHHHHHHcCc
Q 021547           86 MFGLPLARRAVAEYLNRDLPYKLSADDIYIT-LGCMEAVEI---ILTVI-TRLG--A-ANILLPRPGWPFYESFAKRNHI  157 (311)
Q Consensus        86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t-~g~~~a~~~---~~~~l-~~~g--~-d~Vl~~~p~~~~~~~~~~~~g~  157 (311)
                      .+|+.++-..+..+|...-|    -|.+.+- +++.++-++   ++++. ..+|  . ...|+|...|..-...+...|.
T Consensus       577 aqGY~~lf~~Le~~Lc~iTG----~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magm  652 (1001)
T KOG2040|consen  577 AQGYQQLFTELEKDLCEITG----FDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGM  652 (1001)
T ss_pred             HhhHHHHHHHHHHHhheeec----ccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCC
Confidence            45777777778777765333    3455553 222333333   23333 2333  1 3567888888888889999999


Q ss_pred             EEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 021547          158 EVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH  228 (311)
Q Consensus       158 ~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~  228 (311)
                      +++++..+  .++.+|..+|++...+   +-.++.++.|.. .|+.  .+.+++++++.++||--|..|.+--.
T Consensus       653 kvvpV~~~--~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVYlDGANMN  721 (1001)
T KOG2040|consen  653 KVVPVGCD--ANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVYLDGANMN  721 (1001)
T ss_pred             EEEEeecc--CCCCccHHHHHHHHHHhhhhhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEEecCCCcc
Confidence            99999875  4567999999875543   455667766643 2332  34599999999999999999988654

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=95.13  E-value=0.15  Score=43.69  Aligned_cols=178  Identities=17%  Similarity=0.131  Sum_probs=99.1

Q ss_pred             cCCCCCCCCCEEEeCChHHHHHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCC-cccCHHHHHh
Q 021547          103 DLPYKLSADDIYITLGCMEAVEIILTVIT--RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERG-WEVDLEAVEA  179 (311)
Q Consensus       103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~d~~~l~~  179 (311)
                      ..|+..-+..+++---....+.+.+..+.  +|.+..|+-..-.-.+.....-..|++++.+....+.+ ...|++.+++
T Consensus        69 l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~  148 (432)
T KOG3843|consen   69 LAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEA  148 (432)
T ss_pred             HhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHH
Confidence            34555555555543222234555566664  34435666555555555566677899888876544333 4557888888


Q ss_pred             hcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCC-eEEEecCccc
Q 021547          180 LADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-VITLGSISKR  257 (311)
Q Consensus       180 ~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~i~s~sK~  257 (311)
                      .+.+ ....++..+.....=..-+++.+++|+.+|..|++.=|+.++|+.-.-  +...-+..-...++ ..++.|+-|.
T Consensus       149 ~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqse--e~i~~iaa~~~~grida~vqsldkn  226 (432)
T KOG3843|consen  149 IIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSE--ECIHKIAAAAECGRIDAFVQSLDKN  226 (432)
T ss_pred             HHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchH--HHHHHHHHHhhhccHHHHHHHhhhc
Confidence            7654 333232222222222223556899999999999999999999985221  01111111112222 2677899999


Q ss_pred             CCCCcceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547          258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       258 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  290 (311)
                      |-.|-  -|.+++.=+      ...++.+.+.+
T Consensus       227 f~vpv--ggaiia~fk------~n~iq~iak~y  251 (432)
T KOG3843|consen  227 FMVPV--GGAIIAAFK------DNFIQEIAKMY  251 (432)
T ss_pred             ceeec--chhHhhHhH------HHHHHHHHHhC
Confidence            86651  144444222      13566655553

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=94.43  E-value=1.6  Score=38.05  Aligned_cols=199  Identities=12%  Similarity=0.065  Sum_probs=106.5

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----FNCYAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      +..++||+-|- .     ..|..|...+++-+-...     ....++ +.....+.+.-...+.+.++++-+-+-+++-.
T Consensus         5 ~~~vvnFaaGP-A-----klp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QG   78 (370)
T KOG2790|consen    5 PERVVNFAAGP-A-----KLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQG   78 (370)
T ss_pred             ccceeecCCCc-c-----cCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeC
Confidence            67899999994 2     335556555555443110     001111 12223333333333433344444444456667


Q ss_pred             ChHHHHHHHHHHHh--cCC--CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC-CcccCHHHHHhhcCCCccEEEEeC
Q 021547          118 GCMEAVEIILTVIT--RLG--AANILLPRPGWPFYESFAKRNHIEVRHFDLLPER-GWEVDLEAVEALADENTAAIVIIN  192 (311)
Q Consensus       118 g~~~a~~~~~~~l~--~~g--~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~i~i~~  192 (311)
                      |+|.-+.++...|+  +.|  +|.|++-.+.-..+.++-+......+..+..... +--+|.+.++.  +++.+.+++|.
T Consensus        79 GGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyyCa  156 (370)
T KOG2790|consen   79 GGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASYVYYCA  156 (370)
T ss_pred             CCcccccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhccc--CCCccEEEEec
Confidence            77888888777776  344  3677766665555555444333334433332211 11234444433  45566777776


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCccee
Q 021547          193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF  265 (311)
Q Consensus       193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~  265 (311)
                      --.-.|+-++.  +.    +-..++..+|.|.+.-.+.    .+..+..+.     +++.+.-|.+|.+|+-+
T Consensus       157 NETVHGVEf~~--~P----~~~~~~~vlVaDmSSnflS----rpvDvsk~g-----vi~aGAQKN~G~aG~Tv  214 (370)
T KOG2790|consen  157 NETVHGVEFDF--IP----VNDPKGAVLVADMSSNFLS----RPVDVSKFG-----VIFAGAQKNVGPAGVTV  214 (370)
T ss_pred             CceeeceecCC--CC----CCCCCCceEEEecccchhc----CCccchhcc-----eEEeccccccCccccEE
Confidence            54555665541  11    1124588889998876543    223333333     78889999999998543

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=94.15  E-value=0.17  Score=45.26  Aligned_cols=74  Identities=22%  Similarity=0.328  Sum_probs=49.4

Q ss_pred             ccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccc--ccCCCCCeEEEecCcccCCC
Q 021547          185 TAAIVIINP-CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG--VFGSIVPVITLGSISKRWIV  260 (311)
Q Consensus       185 ~~~i~i~~p-~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~--~~~~~~~~i~i~s~sK~~~~  260 (311)
                      +.+.+|.-| +...|. .-+++..++|-+++++|++.+|+||++-+..-+|+ ++.-.  .++...++|   +|||-|-.
T Consensus       271 pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk-~WaHehw~l~~PpD~v---TFSKK~q~  346 (484)
T KOG1405|consen  271 PVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGK-FWAHEHWNLDSPPDVV---TFSKKFQT  346 (484)
T ss_pred             CeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCc-eeeehhcCCCCCccce---ehhhhhhc
Confidence            445555555 555554 56889999999999999999999999987554442 22212  222333345   89999754


Q ss_pred             Cc
Q 021547          261 PG  262 (311)
Q Consensus       261 ~G  262 (311)
                      .|
T Consensus       347 gG  348 (484)
T KOG1405|consen  347 GG  348 (484)
T ss_pred             Cc
Confidence            43

>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]

Probab=87.68  E-value=8.1  Score=32.53  Aligned_cols=100  Identities=17%  Similarity=0.229  Sum_probs=66.4

Q ss_pred             CEEEeCChHHHHHHHHHHHhcCCCC-------------EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHH
Q 021547          112 DIYITLGCMEAVEIILTVITRLGAA-------------NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVE  178 (311)
Q Consensus       112 ~v~~t~g~~~a~~~~~~~l~~~g~d-------------~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~  178 (311)
                      -+.+-+||-.+..++..++. .|.+             ......|...-....++..|+.++.....-  ...-..++|.
T Consensus         3 ~~aL~SGGKDS~~Al~~a~~-~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g--~~e~eve~L~   79 (223)
T COG2102           3 VIALYSGGKDSFYALYLALE-EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSG--EEEREVEELK   79 (223)
T ss_pred             EEEEEecCcHHHHHHHHHHH-cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCc--cchhhHHHHH
Confidence            36778889888888888773 3412             222222222233567888899988876542  1223566666


Q ss_pred             hhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547          179 ALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI  221 (311)
Q Consensus       179 ~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li  221 (311)
                      ++++. +..+|+       +|.+.+..++.++-++|++.|+.++
T Consensus        80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~  116 (223)
T COG2102          80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVY  116 (223)
T ss_pred             HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence            66653 444555       7999999999999999999998743

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=85.65  E-value=17  Score=30.34  Aligned_cols=97  Identities=16%  Similarity=0.188  Sum_probs=55.6

Q ss_pred             CCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547          108 LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA  187 (311)
Q Consensus       108 ~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  187 (311)
                      +....|++..||..|...+ ..|++.| ..|.+.+|....-.......| ++..+.-.      ...+++.     + .-
T Consensus         7 l~gk~vlVvGgG~va~rk~-~~Ll~~g-a~VtVvsp~~~~~l~~l~~~~-~i~~~~~~------~~~~dl~-----~-~~   71 (205)
T TIGR01470         7 LEGRAVLVVGGGDVALRKA-RLLLKAG-AQLRVIAEELESELTLLAEQG-GITWLARC------FDADILE-----G-AF   71 (205)
T ss_pred             cCCCeEEEECcCHHHHHHH-HHHHHCC-CEEEEEcCCCCHHHHHHHHcC-CEEEEeCC------CCHHHhC-----C-cE
Confidence            4556788888888776665 5555778 667777776654333233333 34443321      1223321     2 34


Q ss_pred             EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEE-EEeccc
Q 021547          188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILV-IADEVY  226 (311)
Q Consensus       188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~l-i~D~ay  226 (311)
                      +++..++++.       .-..+...|++.++++ ++|+.-
T Consensus        72 lVi~at~d~~-------ln~~i~~~a~~~~ilvn~~d~~e  104 (205)
T TIGR01470        72 LVIAATDDEE-------LNRRVAHAARARGVPVNVVDDPE  104 (205)
T ss_pred             EEEECCCCHH-------HHHHHHHHHHHcCCEEEECCCcc
Confidence            4555555542       2478999999999888 345443

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=85.31  E-value=12  Score=31.50  Aligned_cols=88  Identities=15%  Similarity=0.111  Sum_probs=53.8

Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      ..++.+|.+.+....++.++.-......++..|.+++..+..       |.+.|.++++ +...++++.+...   .-..
T Consensus        12 ~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~-g~d~v~~~~~~~~---~~~~   80 (233)
T PF05368_consen   12 RSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALK-GVDAVFSVTPPSH---PSEL   80 (233)
T ss_dssp             HHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHT-TCSEEEEESSCSC---CCHH
T ss_pred             HHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHc-CCceEEeecCcch---hhhh
Confidence            345555555663444445555333445567789988766542       7889998888 4555555655332   1234


Q ss_pred             HHHHHHHHHHHHhCCEEEE
Q 021547          204 QHLQKIAETARKLGILVIA  222 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~  222 (311)
                      +.-..+++.|++.|+-.++
T Consensus        81 ~~~~~li~Aa~~agVk~~v   99 (233)
T PF05368_consen   81 EQQKNLIDAAKAAGVKHFV   99 (233)
T ss_dssp             HHHHHHHHHHHHHT-SEEE
T ss_pred             hhhhhHHHhhhccccceEE
Confidence            5578899999999987776

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>CHL00200 trpA tryptophan synthase alpha subunit; Provisional

Probab=82.53  E-value=32  Score=29.96  Aligned_cols=96  Identities=17%  Similarity=0.298  Sum_probs=64.0

Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCc---chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCc
Q 021547          122 AVEIILTVITRLGAANILLPRPGWP---FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCG  198 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG  198 (311)
                      +++..+.-+.+.|.|.|++++--+.   .+...++..|+..+.+=. +.    .+.+.++...+....-+++.+....||
T Consensus       107 G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~-Pt----T~~eri~~i~~~a~gFIY~vS~~GvTG  181 (263)
T CHL00200        107 GINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIA-PT----SSKSRIQKIARAAPGCIYLVSTTGVTG  181 (263)
T ss_pred             CHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEEC-CC----CCHHHHHHHHHhCCCcEEEEcCCCCCC
Confidence            5566677777888899999986554   345677888888776632 21    256777776665555666656667788


Q ss_pred             cCC-CHHHHHHHHHHHHHh-CCEEEE
Q 021547          199 NVL-TYQHLQKIAETARKL-GILVIA  222 (311)
Q Consensus       199 ~~~-~~~~l~~l~~l~~~~-~~~li~  222 (311)
                      ..- -.+++.++++.++++ +..+.+
T Consensus       182 ~~~~~~~~~~~~i~~ir~~t~~Pi~v  207 (263)
T CHL00200        182 LKTELDKKLKKLIETIKKMTNKPIIL  207 (263)
T ss_pred             CCccccHHHHHHHHHHHHhcCCCEEE
Confidence            742 235578888888765 666665

>PLN02591 tryptophan synthase

Probab=82.22  E-value=32  Score=29.73  Aligned_cols=157  Identities=16%  Similarity=0.217  Sum_probs=97.6

Q ss_pred             CCCCeeecCCC--CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh-
Q 021547           43 DPRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC-  119 (311)
Q Consensus        43 ~~~~~i~~~~g--~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~-  119 (311)
                      .+-++|-++..  ||.     .--|.++++..++++.+.        .+..+-+.+.+.- +....    .-+++|--. 
T Consensus        28 ~Gad~iElGiPfSDP~-----aDGpvIq~a~~rAL~~G~--------~~~~~~~~~~~~r-~~~~~----p~ilm~Y~N~   89 (250)
T PLN02591         28 CGADVIELGVPYSDPL-----ADGPVIQAAATRALEKGT--------TLDSVISMLKEVA-PQLSC----PIVLFTYYNP   89 (250)
T ss_pred             CCCCEEEECCCCCCCc-----ccCHHHHHHHHHHHHcCC--------CHHHHHHHHHHHh-cCCCC----CEEEEecccH
Confidence            37899998876  443     234788888888887542        2233344443322 21111    113443222 


Q ss_pred             --HHHHHHHHHHHhcCCCCEEEecCCCCc---chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCC
Q 021547          120 --MEAVEIILTVITRLGAANILLPRPGWP---FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPC  194 (311)
Q Consensus       120 --~~a~~~~~~~l~~~g~d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~  194 (311)
                        .-+++..+..+.+.|.|.||+++--+.   .+...++..|+..+.+=. +    ..+.+.+++........+++.+-.
T Consensus        90 i~~~G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~-P----tt~~~ri~~ia~~~~gFIY~Vs~~  164 (250)
T PLN02591         90 ILKRGIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLTT-P----TTPTERMKAIAEASEGFVYLVSST  164 (250)
T ss_pred             HHHhHHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeC-C----CCCHHHHHHHHHhCCCcEEEeeCC
Confidence              236677777788888899999987765   456777888988887632 2    135566777665555666665656


Q ss_pred             CCCccCCC-HHHHHHHHHHHHHh-CCEEEE
Q 021547          195 NPCGNVLT-YQHLQKIAETARKL-GILVIA  222 (311)
Q Consensus       195 nptG~~~~-~~~l~~l~~l~~~~-~~~li~  222 (311)
                      .-||..-. .++++++++.++++ ++.+++
T Consensus       165 GvTG~~~~~~~~~~~~i~~vk~~~~~Pv~v  194 (250)
T PLN02591        165 GVTGARASVSGRVESLLQELKEVTDKPVAV  194 (250)
T ss_pred             CCcCCCcCCchhHHHHHHHHHhcCCCceEE
Confidence            67776433 46688877777775 666665

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=80.73  E-value=51  Score=32.60  Aligned_cols=76  Identities=20%  Similarity=0.278  Sum_probs=46.5

Q ss_pred             hcCCCCEEEecCCCCcchHHHHHH----cCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHH
Q 021547          131 TRLGAANILLPRPGWPFYESFAKR----NHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL  206 (311)
Q Consensus       131 ~~~g~d~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l  206 (311)
                      ..++ .+.++...+|+.....++-    .|++++..          |.++.. ...++..++++..|.. -|.+.+   .
T Consensus       202 ~~kr-kk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~----------~~~~~~-~s~~~v~gvlvQYP~t-~G~i~d---~  265 (1001)
T KOG2040|consen  202 INKR-KKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS----------DIKEAD-YSSKDVSGVLVQYPDT-EGSVLD---F  265 (1001)
T ss_pred             hccc-ceEEecCCCCcchhhhhhccccccceeEEec----------CHHHhh-ccccceeEEEEEcCCC-CCcccC---H
Confidence            3466 7899999999987665542    22222221          222211 1233566677777654 566677   7


Q ss_pred             HHHHHHHHHhCCEEEE
Q 021547          207 QKIAETARKLGILVIA  222 (311)
Q Consensus       207 ~~l~~l~~~~~~~li~  222 (311)
                      .++++.+++.+..+++
T Consensus       266 ~el~~~a~~~~s~vv~  281 (1001)
T KOG2040|consen  266 DELVELAHANGSLVVM  281 (1001)
T ss_pred             HHHHHHhhccCceEEE
Confidence            8888888888877665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	311
3pdx_A	402	Crystal Structural Of Mouse Tyrosine Aminotransfera		2e-51
3dyd_A	427	Human Tyrosine Aminotransferase Length = 427		2e-50
1bw0_A	416	Crystal Structure Of Tyrosine Aminotransferase From		4e-34
1xi9_A	406	Alanine Aminotransferase From Pyrococcus Furiosus P		5e-24
1v2d_A	381	Crystal Structure Of T.Th Hb8 Glutamine Aminotransf		9e-17
1gde_A	389	Crystal Structure Of Pyrococcus Protein A-1 E-form		4e-16
1dju_A	388	Crystal Structure Of Aromatic Aminotransferase From		4e-16
1bkg_A	385	Aspartate Aminotransferase From Thermus Thermophilu		3e-15
1b5o_A	385	Thermus Thermophilus Aspartate Aminotransferase Sin		3e-15
5bj3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		1e-14
1gc3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		1e-14
1gck_A	385	Thermus Thermophilus Aspartate Aminotransferase Dou		1e-14
1bjw_A	382	Aspartate Aminotransferase From Thermus Thermophilu		1e-14
3b46_A	447	Crystal Structure Of Bna3p, A Putative Kynurenine A		1e-13
2gb3_A	409	Crystal Structure Of Aspartate Aminotransferase (Tm		3e-13
1yiy_A	429	Aedes Aegypti Kynurenine Aminotransferase Length =		3e-13
1j32_A	388	Aspartate Aminotransferase From Phormidium Lapideum		5e-13
2o0r_A	411	The Three-Dimensional Structure Of N-Succinyldiamin		6e-13
1yiz_A	429	Aedes Aegypti Kynurenine Aminotrasferase Length = 4		2e-12
1u08_A	386	Crystal Structure And Reactivity Of Ybdl From Esche		3e-12
3tcm_A	500	Crystal Structure Of Alanine Aminotransferase From		1e-11
3ele_A	398	Crystal Structure Of Amino Transferase (rer07020700		3e-11
3e2z_B	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		4e-11
1w7n_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		5e-11
3e2f_A	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		2e-10
1w7l_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		2e-10
3fvs_A	422	Human Kynurenine Aminotransferase I In Complex With		3e-10
3piu_A	410	High-Resolution Structure Of Native Malus Domestica		7e-10
1ynu_A	473	Crystal Structure Of Apple Acc Synthase In Complex		7e-10
1b8g_A	429	1-aminocyclopropane-1-carboxylate Synthase Length =		8e-10
1m7y_A	435	Crystal Structure Of Apple Acc Synthase In Complex		8e-10
3l8a_A	421	Crystal Structure Of Metc From Streptococcus Mutans		9e-10
3ihj_A	498	Human Alanine Aminotransferase 2 In Complex With Pl		1e-09
3op7_A	375	Crystal Structure Of A Plp-Dependent Aminotransfera		1e-09
3jtx_A	396	Crystal Structure Of Aminotransferase (np_283882.1)		1e-09
2z61_A	370	Crystal Structure Of Mj0684 From Methanococcus Jann		2e-09
2zc0_A	407	Crystal Structure Of An Archaeal Alanine:glyoxylate		7e-09
3b1c_A	392	Crystal Structure Of Betac-S Lyase From Streptococc		1e-08
1o4s_A	389	Crystal Structure Of Aspartate Aminotransferase (Tm		1e-08
1lkc_A	364	Crystal Structure Of L-Threonine-O-3-Phosphate Deca		3e-08
1x0m_A	403	A Human Kynurenine Aminotransferase Ii Homologue Fr		6e-08
3aov_A	448	Crystal Structure Of Pyrococcus Horikoshii Kynureni		6e-08
1wst_A	417	Crystal Structure Of Multiple Substrate Aminotransf		1e-07
2x5d_A	412	Crystal Structure Of A Probable Aminotransferase Fr		2e-07
3if2_A	444	Crystal Structure Of Putative Amino-Acid Aminotrans		4e-07
1c7n_A	399	Crystal Structure Of Cystalysin From Treponema Dent		4e-07
4dgt_A	391	Crystal Structure Of Plp-Bound Putative Aminotransf		5e-07
3f6t_A	533	Crystal Structure Of Aspartate Aminotransferase (E.		6e-07
3ftb_A	361	The Crystal Structure Of The Histidinol-Phosphate A		7e-07
3asa_A	400	Crystal Structure Of Apo-Ll-Diaminopimelate Aminotr		1e-06
1d2f_A	390	X-Ray Structure Of Maly From Escherichia Coli: A Py		1e-06
3ezs_A	376	Crystal Structure Of Aminotransferase Aspb (Np_2074		3e-06
3fdb_A	377	Crystal Structure Of A Putative Plp-Dependent Beta-		5e-06
1iax_A	428	Crystal Structure Of Acc Synthase Complexed With Pl		6e-06
3dzz_A	391	Crystal Structure Of A Putative Plp-Dependent Amino		8e-06
3ffh_A	363	The Crystal Structure Of Histidinol-phosphate Amino		9e-06
1vp4_A	425	Crystal Structure Of A Putative Aminotransferase (T		9e-06
3h14_A	391	Crystal Structure Of A Putative Aminotransferase Fr		1e-05
3t32_B	383	Crystal Structure Of A Putative C-S Lyase From Baci		2e-05
3g7q_A	417	Crystal Structure Of Valine-Pyruvate Aminotransfera		5e-05
2dou_A	376	Probable N-Succinyldiaminopimelate Aminotransferase		6e-05
2z1z_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		6e-05
2zy2_A	544	Dodecameric L-Aspartate Beta-Decarboxylase Length =		9e-05
3nra_A	407	Crystal Structure Of An Aspartate Aminotransferase		9e-05
3eia_A	432	Crystal Structure Of K270q Variant Of Ll-Diaminopim		1e-04
2z20_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		1e-04
4ge7_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		2e-04
4gdy_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		2e-04
3ei8_A	432	Crystal Structure Of K270n Variant Of Ll-Diaminopim		2e-04
3cq5_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		4e-04
3cq4_A	376	Histidinol-Phosphate Aminotransferase From Coryneba		4e-04
2xh1_A	425	Crystal Structure Of Human Kat Ii-Inhibitor Complex		5e-04
3ue8_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		6e-04
2r2n_A	425	The Crystal Structure Of Human Kynurenine Aminotran		6e-04
2vgz_A	427	Crystal Structure Of Human Kynurenine Aminotransfer		6e-04
2qlr_A	425	Crystal Structure Of Human Kynurenine Aminotransfer		7e-04

>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase Length = 402

Iteration: 1
 Score =  199 bits (505), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 106/272 (38%), Positives = 158/272 (58%), Gaps = 6/272 (2%)
Query: 31  AIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLP 90
           AIV  M+ V  N  + VI L  GDP  F    T      A+ D++ S  +N YAP  G  
Sbjct: 18  AIVDNMK-VKPNPNKTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGYL 76
Query: 91  LARRAVAEYLN-RDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE 149
            +R  VA Y +  + P  L A D+ +T GC +A+E+ L V+   G  NIL+PRPG+  Y 
Sbjct: 77  SSREEVASYYHCPEAP--LEAKDVILTSGCSQAIELCLAVLANPGQ-NILIPRPGFSLYR 133
Query: 150 SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKI 209
           + A+   IEV+ ++LLPE+ WE+DL+ +E+L DE TA +V+ NP NPCG+V + +HLQKI
Sbjct: 134 TLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKI 193
Query: 210 AETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269
              A +  + ++ADE+YG + F    Y PM    + VP+++ G ++ RW+VPGWR GW+ 
Sbjct: 194 LAVAERQCVPILADEIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWIL 253
Query: 270 TNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
            +D   +       G +K    +  GP T++Q
Sbjct: 254 IHDRRDIFGNEIRDGLVKLSQRIL-GPCTIVQ 284

>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase Length = 427

Iteration: 1
 Score =  195 bits (496), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 102/272 (37%), Positives = 159/272 (58%), Gaps = 6/272 (2%)
Query: 31  AIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLP 90
           AIV  M+ V  N  + +I L  GDP  F    T      A+ D++ S  +N YAP  G  
Sbjct: 41  AIVDNMK-VKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFL 99
Query: 91  LARRAVAEYLN-RDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE 149
            +R  +A Y +  + P  L A D+ +T GC +A+++ L V+   G  NIL+PRPG+  Y+
Sbjct: 100 SSREEIASYYHCPEAP--LEAKDVILTSGCSQAIDLCLAVLANPGQ-NILVPRPGFSLYK 156
Query: 150 SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKI 209
           + A+   IEV+ ++LLPE+ WE+DL+ +E L DE TA +++ NP NPCG+V + +HLQKI
Sbjct: 157 TLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKI 216
Query: 210 AETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269
              A +  + ++ADE+YG + F    Y P+    + VP+++ G ++KRW+VPGWR GW+ 
Sbjct: 217 LAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWIL 276
Query: 270 TNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
            +D   +       G +K    +  GP T++Q
Sbjct: 277 IHDRRDIFGNEIRDGLVKLSQRIL-GPCTIVQ 307

>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From Trypanosoma Cruzi Length = 416

Iteration: 1
 Score =  141 bits (356), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 136/277 (49%), Gaps = 13/277 (4%)
Query: 44  PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD 103
           P+P+I L  GDP       T+A     + +++ S   N Y P  G P AR AVA +    
Sbjct: 32  PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNS 91
Query: 104 LPYK------LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHI 157
             +K      +  D++ +  G    + + +T I   G    L+P+PG+P YE+  K   I
Sbjct: 92  FVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDY-ALVPQPGFPHYETVCKAYGI 150
Query: 158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG 217
            +  ++  PE  WE DL+ +  L D+ T  +++ NP NPCG+  + +H++ I   A +L 
Sbjct: 151 GMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELR 210
Query: 218 ILVIADEVYGHLAF-GSTP---YIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273
           + + +DE+Y  + F G  P   +  +  F + VP + LG  +   +VPGWR GWL   DP
Sbjct: 211 LPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDP 270
Query: 274 NGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310
           +G       +  +K    +  GP T++Q      L+N
Sbjct: 271 HG--NGPSFLEGLKRVGMLVCGPCTVVQAALGEALLN 305

>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus Pfu-1397077-001 Length = 406

Iteration: 1
 Score =  108 bits (269), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 120/257 (46%), Gaps = 6/257 (2%)
Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106
           VI L  GDP  F  F+     ++A   +++    N Y    GLP  R+A+ E   R    
Sbjct: 40  VIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVEREKRKNGV 97
Query: 107 KLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP 166
            ++ DD+ +T    EA+++I   +   G   IL+P P +P Y    K    +   +  + 
Sbjct: 98  DITPDDVRVTAAVTEALQLIFGALLDPGD-EILVPGPSYPPYTGLVKFYGGKPVEYRTIE 156
Query: 167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY 226
           E  W+ D++ +     + T AI +INP NP G +   + L++I   A +  I VI+DE+Y
Sbjct: 157 EEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIY 216
Query: 227 GHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSI 286
             + +    +I  G     VPVI +  +SK +   GWR G++   DP   L  S +  +I
Sbjct: 217 DLMTYEGE-HISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKL--SEVREAI 273
Query: 287 KACLGVRSGPSTLIQVC 303
                +R  P+T  Q  
Sbjct: 274 DRLARIRLCPNTPAQFA 290

>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase Length = 381

Iteration: 1
 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 30/210 (14%)
Query: 71  IVDSVRSSM--FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILT 128
           ++++VR ++   + YAP  GLP  R A+AE       + +  + + +T G  EA+ ++L 
Sbjct: 43  LLEAVRRALGRQDQYAPPAGLPALREALAEE------FAVEPESVVVTSGATEALYVLLQ 96
Query: 129 VITRLGAANILLPRPGWPFYE-----SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE 183
            +   G   ++L     PF++     +F       +   DL PE G+ +DL A+E     
Sbjct: 97  SLVGPGDEVVVL----EPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALEKALTP 151
Query: 184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP-----YIP 238
            T A+++  P NP G V   + L+ IA  AR   + +I+DEVY  L +G  P     + P
Sbjct: 152 RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAP 211
Query: 239 MGVFGSIVPVITLGSISKRWIVPGWRFGWL 268
              F       T+GS  KR    G+R GW+
Sbjct: 212 ERTF-------TVGSAGKRLEATGYRVGWI 234

>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form Length = 389

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 25/264 (9%)
Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
           + VI LG G+P           A++A+           Y P  GL   R A+AE L +  
Sbjct: 26  KDVISLGIGEPDFDTPQHIKEYAKEAL-----DKGLTHYGPNIGLLELREAIAEKLKKQ- 79
Query: 105 PYKLSAD---DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIE 158
              + AD   +I + LG  +A  + L+   + G   +L+P P +  Y      A    +E
Sbjct: 80  -NGIEADPKTEIMVLLGANQAFLMGLSAFLKDGE-EVLIPTPAFVSYAPAVILAGGKPVE 137
Query: 159 VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGI 218
           V  ++   E  + ++++ ++    + T A++I +PCNP G VLT + L++IA+   +  +
Sbjct: 138 VPTYE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDL 194
Query: 219 LVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL 277
           +VI+DEVY H  +    +  +    G     IT+   SK + + GWR G++A   P+ ++
Sbjct: 195 IVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAA--PSWII 252
Query: 278 QKSGIVGSIKACLGVRSGPSTLIQ 301
           ++      +K  +   + P T IQ
Sbjct: 253 ER-----MVKFQMYNATCPVTFIQ 271

>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From Pyrococcus Horikoshii Ot3 Length = 388

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 25/264 (9%)
Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
           + VI LG G+P           A++A+           Y P  GL   R A+AE L +  
Sbjct: 25  KDVISLGIGEPDFDTPQHIKEYAKEAL-----DKGLTHYGPNIGLLELREAIAEKLKKQ- 78
Query: 105 PYKLSAD---DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIE 158
              + AD   +I + LG  +A  + L+   + G   +L+P P +  Y      A    +E
Sbjct: 79  -NGIEADPKTEIMVLLGANQAFLMGLSAFLKDGE-EVLIPTPAFVSYAPAVILAGGKPVE 136
Query: 159 VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGI 218
           V  ++   E  + ++++ ++    + T A++I +PCNP G VLT + L++IA+   +  +
Sbjct: 137 VPTYE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDL 193
Query: 219 LVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL 277
           +VI+DEVY H  +    +  +    G     IT+   SK + + GWR G++A   P+ ++
Sbjct: 194 IVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAA--PSWII 251
Query: 278 QKSGIVGSIKACLGVRSGPSTLIQ 301
           ++      +K  +   + P T IQ
Sbjct: 252 ER-----MVKFQMYNATCPVTFIQ 270

>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With Maleate Length = 385

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 14/231 (6%)
Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
           YAP  G+P  R A+AE   R+    ++ ++  +T+G  +A+  +   I   G   I+L  
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVL-S 122
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
           P W  Y    +     V   + LPE G+  D E V       T A+V+ +P NP G V  
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIV 260
            + L+ +A  A +    +++DE+Y HL +    + P    G + P   +T+   +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 261 PGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK 311
            GWR G+     P  V++    V S        + P T+ Q   +  L N+
Sbjct: 239 TGWRIGYAC--GPKEVIKAMASVSSQST-----TSPDTIAQWATLEALTNQ 282

>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single Mutant 1 Length = 385

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 14/231 (6%)
Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
           YAP  G+P  R A+AE   R+    ++ ++  +T+G  +A+  +   I   G   I+L  
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVL-S 122
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
           P W  Y    +     V   + LPE G+  D E V       T A+V+ +P NP G V  
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIV 260
            + L+ +A  A +    +++DE+Y HL +    + P    G + P   +T+   +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 261 PGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK 311
            GWR G+     P  V++    V S        + P T+ Q   +  L N+
Sbjct: 239 TGWRIGYAC--GPKEVIKAMASVSSQST-----TSPDTIAQWATLEALTNQ 282

>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 1 Length = 385

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
           YAP  G+P  R A+AE   R+    ++ ++  +T+G  +A+  +   I   G   I+L  
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVL-S 122
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
           P W  Y    +     V   + LPE G+  D E V       T A+V+ +P NP G V  
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIV 260
            + L+ +A  A +    +++DE+Y HL +    + P    G + P   +T+   +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 261 PGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK 311
            GWR G+     P  V++    V          + P T+ Q   +  L N+
Sbjct: 239 TGWRIGYAC--GPKEVIKAMASVSRQST-----TSPDTIAQWATLEALTNQ 282

>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 2 Complexed With Tryptophan Length = 385

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
           YAP  G+P  R A+AE   R+    ++ ++  +T+G  +A+  +   I   G   I+L  
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVL-S 122
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
           P W  Y    +     V   + LPE G+  D E V       T A+V+ +P NP G V  
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIV 260
            + L+ +A  A +    +++DE+Y HL +    + P    G + P   +T+   +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 261 PGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK 311
            GWR G+     P  V++    V          + P T+ Q   +  L N+
Sbjct: 239 TGWRIGYAC--GPKEVIKAMASVSRQST-----TSPDTIAQWATLEALTNQ 282

>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double Mutant 1 Complexed With Aspartate Length = 385

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
           YAP  G+P  R A+AE   R+    ++ ++  +T+G  +A+  +   I   G   I+L  
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVL-S 122
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
           P W  Y    +     V   + LPE G+  D E V       T A+V+ +P NP G V  
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIV 260
            + L+ +A  A +    +++DE+Y HL +    + P    G + P   +T+   +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 261 PGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK 311
            GWR G+     P  V++    V          + P T+ Q   +  L N+
Sbjct: 239 TGWRIGYAC--GPKEVIKAMASVSRQST-----TSPDTIAQWATLEALTNQ 282

>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus Length = 382

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
           YAP  G+P  R A+AE   R+    ++ ++  +T+G  +A+  +   I   G   I+L  
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVL-S 122
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
           P W  Y    +     V   + LPE G+  D E V       T A+V+ +P NP G V  
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIV 260
            + L+ +A  A +    +++DE+Y HL +    + P    G + P   +T+   +  + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAXAFAM 238
Query: 261 PGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVNK 311
            GWR G+     P  V++    V S        + P T+ Q   +  L N+
Sbjct: 239 TGWRIGYAC--GPKEVIKAMASVSSQST-----TSPDTIAQWATLEALTNQ 282

>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine Aminotransferase From Saccharomyces Cerevisiae Length = 447

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 110/277 (39%), Gaps = 35/277 (12%)
Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
           R +I LG G    F  +     A      ++   M N Y+P  G P    ++ +  +   
Sbjct: 57  RELINLGQG----FFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIY 112
Query: 105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF--------AKRNH 156
             +L A+++ +T G  E +   L  +   G   I+      PF++ +         K  +
Sbjct: 113 NTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFE----PFFDQYIPNIELCGGKVVY 168
Query: 157 IEV---RHFDLLPERG--WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
           + +   +  D    RG  W +D E  E      T A++I  P NP G V T + L  +  
Sbjct: 169 VPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGN 228
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKRWIVPGWRFG 266
              K  +++I+DEVY HL F  +         ++ P      +T+GS    +   GWR G
Sbjct: 229 ICVKHNVVIISDEVYEHLYFTDS----FTRIATLSPEIGQLTLTVGSAGXSFAATGWRIG 284
Query: 267 WLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVC 303
           W+ +   N  L         + C    + PS L + C
Sbjct: 285 WVLS--LNAELLSYAAKAHTRICF---ASPSPLQEAC 316

>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698) From Thermotoga Maritima At 2.50 A Resolution Length = 409

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
           Y+   G+   R A A Y  R     +  +++ +T G  EA+     VI   G   IL+  
Sbjct: 75  YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGD-EILVLE 133
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
           P +  Y +FAK   +++       E G+ +  + +E+  +E T  IV+ NPCNP G V  
Sbjct: 134 PFYANYNAFAKIAGVKLIPVTRRXEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYG 192
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV-----PVITLGSISKR 257
               + + E A + G+ +I DEVY  + F        G F S +      V+ + S+S +
Sbjct: 193 KDEXRYLVEIAERHGLFLIVDEVYSEIVF-------RGEFASALSIESDKVVVIDSVSXK 245
Query: 258 WIVPGWRFGWLATND 272
           +   G R G L T +
Sbjct: 246 FSACGARVGCLITRN 260

>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase Length = 429

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 81  NCYAPMFGLPLARRAVAEYLNRDLPYKLS-ADDIYITLGCMEAVEIILTVITRLGAANIL 139
           N Y   FG P   +A+++  ++ +   ++   ++ +T+G  EA+   +      G   I+
Sbjct: 71  NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 140 LPRPGWPFYESFAKRNHIEVRHFDLLPER--------GWEVDLEAVEALADENTAAIVII 191
           +  P +  YE   K      R   L P +         W +D   +EAL +E T  I+I 
Sbjct: 131 I-EPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIIN 189
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVIT 250
            P NP G V+    L+ +A   +K  +L ++DEVY H+ F    +I +    G     IT
Sbjct: 190 TPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTIT 249
Query: 251 LGSISKRWIVPGWRFGW 267
           +GS  K + + GW+ GW
Sbjct: 250 IGSAGKTFSLTGWKIGW 266

>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum Length = 388

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 3/189 (1%)
Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
           Y P  G P  R A+A+ L RD      AD+I +T G  +++  ++  +   G   +++P 
Sbjct: 63  YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGD-EVIIPA 121
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
           P W  Y    K             E  ++V  E +       T  +V   P NP G V T
Sbjct: 122 PFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYT 181
Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG--SIVPVITLGSISKRWIV 260
              ++ IA+ A + G+ V++DE+Y  + +    ++ +G     +    +     +K + +
Sbjct: 182 PDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAM 241
Query: 261 PGWRFGWLA 269
            GWR G+LA
Sbjct: 242 TGWRVGFLA 250

>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis Length = 411

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 9/161 (5%)
Query: 112 DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRH---FDLLPE- 167
           ++ +T+G  EA+   +  +   G+  +L+     PFY+S++    +   H     L+P+ 
Sbjct: 88  EVLVTVGATEAIAAAVLGLVEPGSEVLLIE----PFYDSYSPVVAMAGAHRVTVPLVPDG 143
Query: 168 RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG 227
           RG+ +D +A+       T A++I +P NP G VL+   L  IAE A    ++VI DEVY 
Sbjct: 144 RGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYE 203
Query: 228 HLAFGSTPYIPMGVFGSIVP-VITLGSISKRWIVPGWRFGW 267
           HL F    ++P+  F  +    IT+ S +  +   GW+ GW
Sbjct: 204 HLVFDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGW 244

>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase Length = 429

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 81  NCYAPMFGLPLARRAVAEYLNRDLPYKLS-ADDIYITLGCMEAVEIILTVITRLGAANIL 139
           N Y   FG P   +A+++  ++ +   ++   ++ +T+G  EA+   +      G   I+
Sbjct: 71  NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 140 LPRPGWPFYESFAKRNHIEVRHFDLLPER--------GWEVDLEAVEALADENTAAIVII 191
           +  P +  YE   K      R   L P +         W +D   +EAL +E T  I+I 
Sbjct: 131 I-EPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIIN 189
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVIT 250
            P NP G V+    L+ +A   +K  +L ++DEVY H+ F    +I +    G     IT
Sbjct: 190 TPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTIT 249
Query: 251 LGSISKRWIVPGWRFGW 267
           +GS    + + GW+ GW
Sbjct: 250 IGSAGXTFSLTGWKIGW 266

>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia Coli Identify A Methionine Aminotransferase Function. Length = 386

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 10/198 (5%)
Query: 81  NCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAVEIILTVITRLGAANIL 139
           N YAPM G+   R A+A+   R   Y+  AD DI +T G  EA+   +T + R G   I 
Sbjct: 61  NQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVIC 120
Query: 140 LPRPGWPFYESFAKRNHIE---VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNP 196
                 P Y+S+A    +    V+   L P   + VD +   AL  E T  +++  P NP
Sbjct: 121 FD----PSYDSYAPAIALSGGIVKRMALQPPH-FRVDWQEFAALLSERTRLVILNTPHNP 175
Query: 197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-VITLGSIS 255
              V        + +      I VI+DEVY H+ F    +  +     +    + + S  
Sbjct: 176 SATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFG 235
Query: 256 KRWIVPGWRFGWLATNDP 273
           K + + GW+ G+     P
Sbjct: 236 KTYHMTGWKVGYCVAPAP 253

>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum Vulgare Length = 500

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
           Y+   G+   R A+A  +     +  +ADDI++T G    V +++ ++ R     IL+P 
Sbjct: 130 YSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPI 189
Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNP 196
           P +P Y +    +   +  + L    GW ++   V+   ++      N  A+V+INP NP
Sbjct: 190 PQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNP 249
Query: 197 CGNVLTYQHLQKIAETARKLGILVIADEVY------GHLAFGSTPYI--PMGVFGSIVPV 248
            G VL  ++   I +  +  G++++ADEVY       +  F S   I   +G     +P+
Sbjct: 250 TGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPL 309
Query: 249 ITLGSISKRWIVP-GWRFGWL 268
           ++  S+SK +    G R G+ 
Sbjct: 310 VSYQSVSKGYYGECGKRGGYF 330

>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803) From Eubacterium Rectale At 2.10 A Resolution Length = 398

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 105/225 (46%), Gaps = 17/225 (7%)
Query: 71  IVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI 130
           +V    S   + Y    G    R A+AE+LN       +AD++Y T G   ++ I    +
Sbjct: 60  LVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRAL 119
Query: 131 TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE-RGWEVDLEAVEALADENTAAIV 189
           T       +   P +P Y+ F   N    R  ++  +   +++D +A+E   + +T  ++
Sbjct: 120 TSDAYDEFITIAPYFPEYKVFV--NAAGARLVEVPADTEHFQIDFDALEERINAHTRGVI 177
Query: 190 IINPCNPCGNVLTYQHLQKIAE----TARKLG--ILVIADEVYGHLAFG--STPYIPMGV 241
           I +P NP G V + + ++K+++     ++++G  I +IADE Y  + +     P++    
Sbjct: 178 INSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYY 237
Query: 242 FGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSI 286
             ++V      S SK   +PG R G++    P+ V  K+ +  ++
Sbjct: 238 DNTLVCY----SYSKSLSLPGERIGYVLV--PDEVYDKAELYAAV 276

>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii In Complex With Kynurenine Length = 410

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 25/240 (10%)
Query: 43  DPRPVIPLGHGDPA-AFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLN 101
           DP  V+ LG G P  + P +    +++ A +D++     N Y   FG P   +A++    
Sbjct: 22  DPS-VVNLGQGFPDISPPSYVKEELSKAAFIDNM-----NQYTRGFGHPALVKALSCLYG 75
Query: 102 RDLPYKLSA-DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR 160
           +    ++   ++I + +G   ++   +  +   G   I++     PFY+ +     +   
Sbjct: 76  KIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMV----PFYDCYEPMVRMAGA 131
Query: 161 HFDLLPERG------------WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQK 208
               +P R             W  D   +E+     T AI++  P NP G V T Q LQ 
Sbjct: 132 VPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQV 191
Query: 209 IAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGW 267
           IA+   K   L I+DEVY  L +    ++ +    G     IT+GS  K + V GW+ GW
Sbjct: 192 IADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGW 251

>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I In Pmp Form Length = 422

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 100/242 (41%), Gaps = 24/242 (9%)
Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-MFNCYAPMFGLPLARRAVAEYLNRDLP 105
           V+ LG G    FP F     A +A   +V    M N Y   FG P   + +A +    L 
Sbjct: 30  VVNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLG 85
Query: 106 YKLSA-DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIE------ 158
            ++    ++ +T+G   A+      +   G   I++     PF++ +     +       
Sbjct: 86  QEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIE----PFFDCYEPMTMMAGGRPVF 141
Query: 159 -------VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
                  +++ +L     W++D   +       T A+V+  P NP G V + + L+ +A 
Sbjct: 142 VSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVAS 201
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLAT 270
             ++  ++ I DEVY  + +    +I +    G     +T+GS  K +   GW+ GW+  
Sbjct: 202 LCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLG 261
Query: 271 ND 272
            D
Sbjct: 262 PD 263

>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii, Plp-Bound Form Length = 410

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 25/240 (10%)
Query: 43  DPRPVIPLGHGDPA-AFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLN 101
           DP  V+ LG G P  + P +    +++ A +D++     N Y   FG P   +A++    
Sbjct: 22  DPS-VVNLGQGFPDISPPSYVKEELSKAAFIDNM-----NQYTRGFGHPALVKALSCLYG 75
Query: 102 RDLPYKLSA-DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR 160
           +    ++   ++I + +G   ++   +  +   G   I++     PFY+ +     +   
Sbjct: 76  KIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMV----PFYDCYEPMVRMAGA 131
Query: 161 HFDLLPERG------------WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQK 208
               +P R             W  D   +E+     T AI++  P NP G V T Q LQ 
Sbjct: 132 VPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQV 191
Query: 209 IAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGW 267
           IA+   K   L I+DEVY  L +    ++ +    G     IT+GS    + V GW+ GW
Sbjct: 192 IADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGW 251

>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I Length = 422

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 99/242 (40%), Gaps = 24/242 (9%)
Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-MFNCYAPMFGLPLARRAVAEYLNRDLP 105
           V+ LG G    FP F     A +A   +V    M N Y   FG P   + +A +    L 
Sbjct: 30  VVNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLG 85
Query: 106 YKLSA-DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIE------ 158
            ++    ++ +T+G   A+      +   G   I++     PF++ +     +       
Sbjct: 86  QEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIE----PFFDCYEPMTMMAGGRPVF 141
Query: 159 -------VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
                  +++ +L     W++D   +       T A+V+  P NP G V + + L+ +A 
Sbjct: 142 VSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVAS 201
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLAT 270
             ++  ++ I DEVY  + +    +I +    G     +T+GS    +   GW+ GW+  
Sbjct: 202 LCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLG 261
Query: 271 ND 272
            D
Sbjct: 262 PD 263

>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With Glycerol Length = 422

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 99/242 (40%), Gaps = 24/242 (9%)
Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-MFNCYAPMFGLPLARRAVAEYLNRDLP 105
           V+ LG G    FP F     A +A   +V    M N Y   FG P   + +A +    L 
Sbjct: 30  VVNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLG 85
Query: 106 YKLSA-DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIE------ 158
            ++    ++ +T+G   A+      +   G   I++     PF++ +     +       
Sbjct: 86  QEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIE----PFFDCYEPMTMMAGGRPVF 141
Query: 159 -------VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
                  +++ +L     W++D   +       T A+V+  P NP G V + + L+ +A 
Sbjct: 142 VSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVAS 201
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLAT 270
             ++  ++ I DEVY  + +    +I +    G     +T+GS    +   GW+ GW+  
Sbjct: 202 LCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLG 261
Query: 271 ND 272
            D
Sbjct: 262 PD 263

>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-Vinylglycine Length = 473

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSAD--DIYITLGCMEAVEIILTVITRLGAANILL 140
           +    GLP  ++A+ +++      K++ D   + +T G   A E  +  +   G A +L+
Sbjct: 82  FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEA-VLI 140
Query: 141 PRPGWPFYESFAK-RNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINP 193
           P P +P ++   K R  +E+         G+++   A+E    E          +++ NP
Sbjct: 141 PTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNP 200
Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSI------- 245
            NP G  +T   L  +       GI +I+DE+Y   AF S  +I  M V           
Sbjct: 201 SNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSE 260
Query: 246 --VPVITLGSISKRWIVPGWRFGWLATND 272
               V  + S+SK   +PG+R G + +ND
Sbjct: 261 VWQRVHVVYSLSKDLGLPGFRVGAIYSND 289

>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase Length = 429

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSAD--DIYITLGCMEAVEIILTVITRLGAANILL 140
           +    GLP  ++A+ +++      K++ D   + +T G   A E  +  +   G A +L+
Sbjct: 80  FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEA-VLI 138
Query: 141 PRPGWPFYESFAK-RNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINP 193
           P P +P ++   K R  +E+         G+++   A+E    E          +++ NP
Sbjct: 139 PTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNP 198
Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSI------- 245
            NP G  +T   L  +       GI +I+DE+Y   AF S  +I  M V           
Sbjct: 199 SNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSE 258
Query: 246 --VPVITLGSISKRWIVPGWRFGWLATND 272
               V  + S+SK   +PG+R G + +ND
Sbjct: 259 VWQRVHVVYSLSKDLGLPGFRVGAIYSND 287

>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L- Aminoethoxyvinylglycine Length = 435

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSAD--DIYITLGCMEAVEIILTVITRLGAANILL 140
           +    GLP  ++A+ +++      K++ D   + +T G   A E  +  +   G A +L+
Sbjct: 82  FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEA-VLI 140
Query: 141 PRPGWPFYESFAK-RNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINP 193
           P P +P ++   K R  +E+         G+++   A+E    E          +++ NP
Sbjct: 141 PTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNP 200
Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSI------- 245
            NP G  +T   L  +       GI +I+DE+Y   AF S  +I  M V           
Sbjct: 201 SNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSE 260
Query: 246 --VPVITLGSISKRWIVPGWRFGWLATND 272
               V  + S+SK   +PG+R G + +ND
Sbjct: 261 VWQRVHVVYSLSKDLGLPGFRVGAIYSND 289

>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans Length = 421

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 3/174 (1%)
Query: 94  RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK 153
           +AV ++  ++  Y +  +DI    G + A+ I L   +  G A ++     +PF  +   
Sbjct: 103 QAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRL 162
Query: 154 RNHIEVRHFDLLPERGWEVDLEAVEA-LADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
            +H  V +   +    +E+D E +E  + D N    ++ +P NP G V     L KIAE 
Sbjct: 163 NDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAEL 222
Query: 213 ARKLGILVIADEVYGHLA-FGSTPYIPMGVFGSIVP-VITLGSISKRWIVPGWR 264
            +K G+++++DE++  LA FG+T +    +  S     I L S +K + + G +
Sbjct: 223 CKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTK 276

>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp Length = 498

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 23/235 (9%)
Query: 54  DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR-DLPYKLSADD 112
           D  +FP    A      I+ +   +    Y+   G+   R  VA Y+ R D       D+
Sbjct: 98  DSPSFP--EDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDN 155
Query: 113 IYITLGCMEAVEIILTVITRLGAAN---ILLPRPGWPFYES-FAKRNHIEVRHFDLLPER 168
           IY+T G  + +  IL ++   G  +   +++P P +P Y +  ++ + I+V ++ L  E 
Sbjct: 156 IYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYY-LDEEN 214
Query: 169 GWEVDL----EAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223
            W +++     AV+   D  +   + IINP NP G V + + ++ +   A +  + ++AD
Sbjct: 215 CWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLAD 274
Query: 224 EVYGH---------LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP-GWRFGWL 268
           EVY            +F    Y     + S V + +  S SK ++   G+R G++
Sbjct: 275 EVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYM 329

>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase (Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70 A Resolution Length = 375

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 12/118 (10%)
Query: 158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG 217
           EV  + +  E GW  DLE +  L    T  I I N  NP G V    +L+++ E A ++G
Sbjct: 128 EVDLWQIEEENGWLPDLEKLRQLIRPTTKXICINNANNPTGAVXDRTYLEELVEIASEVG 187
Query: 218 ILVIADEVYGHLAFGSTPYIPMGVFGSIVPV----ITLGSISKRWIVPGWRFGWLATN 271
             +++DEVY   +    P        SI+ V    I + S+S  + +PG R GW+A N
Sbjct: 188 AYILSDEVYRSFSELDVP--------SIIEVYDKGIAVNSLSXTYSLPGIRIGWVAAN 237

>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From Neisseria Meningitidis Z2491 At 1.91 A Resolution Length = 396

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 22/237 (9%)
Query: 48  IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLP-Y 106
           +PL  G+P       T  V  DA+  S+       Y    GLP  R+A A +L R     
Sbjct: 33  VPLHIGEPK----HPTPKVITDALTASLHE--LEKYPLTAGLPELRQACANWLKRRYDGL 86
Query: 107 KLSAD-DIYITLGCMEA----VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRH 161
            + AD +I   LG  EA    V+ +L  ++      I+ P P +  YE        E+ H
Sbjct: 87  TVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEI-H 145
Query: 162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221
           F   P   +  D  ++     + T  + + +P NP G+VL     +++ +   K G ++ 
Sbjct: 146 FANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIA 205
Query: 222 ADEVYGHLAFGSTPYIPMGVFG-------SIVPVITLGSISKRWIVPGWRFGWLATN 271
           +DE Y  + F      P+G          S   ++   S+S R  VPG R G++A +
Sbjct: 206 SDECYSEIYFDGNK--PLGCLQAAAQLGRSRQKLLXFTSLSXRSNVPGLRSGFVAGD 260

>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii Reveals Its Similarity In The Active Site To Kynurenine Aminotransferases Length = 370

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 108/241 (44%), Gaps = 19/241 (7%)
Query: 32  IVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPL 91
           I++L + ++ ++ + VI L  G+P     F T     D  + S++    + Y    G+  
Sbjct: 17  ILALAQKLE-SEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEGKTH-YTDSRGILE 70
Query: 92  ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF 151
            R  ++E         +  D+I IT G    +   L+ I   G   +L+  P +P Y++F
Sbjct: 71  LREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDE-VLIQNPCYPCYKNF 129
Query: 152 AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
                  +R     P    +  +E++E    + T AI+I +P NP G V+     ++I E
Sbjct: 130 -------IRFLGAKP-VFCDFTVESLEEALSDKTKAIIINSPSNPLGEVID----REIYE 177
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271
            A +    +I+DE+Y  L +    Y  +    ++   I +   S  + + GWR G++ +N
Sbjct: 178 FAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGWRIGYVISN 237
Query: 272 D 272
           D
Sbjct: 238 D 238

>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate Aminotransferase Length = 407

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 19/227 (8%)
Query: 51  GHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA 110
           G  DP   P      +A++ +    +S M   Y P  G+P  R  +A +L +    ++S 
Sbjct: 42  GDPDPELIPRAVLGEIAKEVLEKEPKSVM---YTPANGIPELREELAAFLKKYDHLEVSP 98
Query: 111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGW-----PFYESFAKRNHIEVRH---- 161
           ++I IT+G   A++++  V+   G   ++   P +      F +  AK   + V +    
Sbjct: 99  ENIVITIGGTGALDLLGRVLIDPGDV-VITENPSYINTLLAFEQLGAKIEGVPVDNDGMR 157
Query: 162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221
            DLL E+     ++ ++A   +      I    NP G  ++ +  + + E A K  +L+I
Sbjct: 158 VDLLEEK-----IKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLII 212
Query: 222 ADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL 268
            D  Y  + +     +P+    +   VI  G++SK  +  G+R GW+
Sbjct: 213 EDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSK-VLGTGFRIGWI 258

>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus Anginosus: Internal Aldimine Form Length = 392

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Query: 94  RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK 153
           +AV ++   +  Y    +DI    G + A+ I +   T+ G A +L+  P +P +    +
Sbjct: 73  QAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEA-VLINSPVYPPFARSVR 131
Query: 154 RNHIEVRHFDLLPERG-WEVDLEAVEALADENTAAIVII-NPCNPCGNVLTYQHLQKIAE 211
            N+ ++    L  E G +++D E +E    EN   + ++ NP NP G V   + L++I  
Sbjct: 132 LNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGH 191
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKRWIVPGWRFG 266
             +K  +++++DE++  L      ++    F ++ P      + L S +K + + G +  
Sbjct: 192 LCQKHHVILVSDEIHQDLTLFGHEHVS---FNTVSPDFKDFALVLSSATKTFNIAGTKNS 248
Query: 267 WLATNDP 273
           +    +P
Sbjct: 249 YAIIENP 255

>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255) From Thermotoga Maritima At 1.90 A Resolution Length = 389

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 1/185 (0%)
Query: 88  GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPF 147
           G+   R  +A+ +       +S D + +T G  +A+      +   G   I+   P W  
Sbjct: 79  GIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFS-PVWVS 137
Query: 148 YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQ 207
           Y          V   +    + ++  LE VE L    T A++I +P NP G V   + L+
Sbjct: 138 YIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLE 197
Query: 208 KIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
            +   A+K    +I+DEVY  L +       + V      ++ +   SK   + GWR G+
Sbjct: 198 GLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGY 257
Query: 268 LATND 272
           L +++
Sbjct: 258 LISSE 262

>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Salmonella Enterica Length = 364

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 3/150 (2%)
Query: 123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182
            E I TV + L     ++  PG+  Y     ++  E+R + L    GW++    +EAL  
Sbjct: 86  TESIFTVASGLKPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALT- 144
Query: 183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242
            +   + +  P NP G +     LQ IA+  + L I +I DE +       T +IP    
Sbjct: 145 PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIP--AL 202
Query: 243 GSIVPVITLGSISKRWIVPGWRFGWLATND 272
                +  L S++K + +PG R G+L  +D
Sbjct: 203 KDNPHIWVLRSLTKFYAIPGLRLGYLVNSD 232

>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From Pyrococcus Horikoshii Ot3 Length = 403

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 119/278 (42%), Gaps = 37/278 (13%)
Query: 32  IVSLMESVDKNDPRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNC--YAPMF 87
           +  L++ V+ +D   +I L  G  +P  FP      +  D +V+ +         Y    
Sbjct: 21  VRELLKLVETSD---IISLAGGLPNPKTFP----KEIIRDILVEIMEKYADKALQYGTTK 73
Query: 88  GLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAVEIILTVITRLG------AANILL 140
           G    R  + ++L +   Y +S D DI IT G  +A+++I  V    G      A   L 
Sbjct: 74  GFTPLRETLMKWLGKR--YGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLA 131
Query: 141 PRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDL--EAVEALADENTAAIVIIN-PC--N 195
               + FYE      +I++     L + G +V++  E ++ L  +     V+   P   N
Sbjct: 132 ALQAFNFYEP----QYIQIP----LDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQN 183
Query: 196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS 255
           P G  +     + + E A +   +V+ D+ YG L +   P   +    +   VI LG+ S
Sbjct: 184 PAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFS 243
Query: 256 KRWIVPGWRFGWLATNDPNGVLQKSGIVG-SIKACLGV 292
           K  + PG+R GW+   DP G+++K  I   S   C  V
Sbjct: 244 K-ILAPGFRIGWMV-GDP-GIIRKMEIAKQSTDLCTNV 278

>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine Aminotransferase In Complex With Plp Length = 448

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 119/278 (42%), Gaps = 37/278 (13%)
Query: 32  IVSLMESVDKNDPRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNC--YAPMF 87
           +  L++ V+ +D   +I L  G  +P  FP      +  D +V+ +         Y    
Sbjct: 66  VRELLKLVETSD---IISLAGGLPNPKTFP----KEIIRDILVEIMEKYADKALQYGTTK 118
Query: 88  GLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAVEIILTVITRLG------AANILL 140
           G    R  + ++L +   Y +S D DI IT G  +A+++I  V    G      A   L 
Sbjct: 119 GFTPLRETLMKWLGKR--YGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLA 176
Query: 141 PRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDL--EAVEALADENTAAIVIIN-PC--N 195
               + FYE      +I++     L + G +V++  E ++ L  +     V+   P   N
Sbjct: 177 ALQAFNFYEP----QYIQIP----LDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQN 228
Query: 196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS 255
           P G  +     + + E A +   +V+ D+ YG L +   P   +    +   VI LG+ S
Sbjct: 229 PAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFS 288
Query: 256 KRWIVPGWRFGWLATNDPNGVLQKSGIVG-SIKACLGV 292
           K  + PG+R GW+   DP G+++K  I   S   C  V
Sbjct: 289 K-ILAPGFRIGWM-VGDP-GIIRKMEIAKQSTDLCTNV 323

>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase (Msat) From Thermococcus Profundus Length = 417

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 109/273 (39%), Gaps = 32/273 (11%)
Query: 32  IVSLMESVDKNDPRPVIPLGHGDPA--AFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGL 89
           +  L++ V+ +D   VI L  G PA   FP      +A + + +    ++   Y    G 
Sbjct: 31  VRELLKLVETSD---VISLAGGLPAPETFPVETIKKIAVEVLEEHADKAL--QYGTTKGF 85
Query: 90  PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLG------AANILLPRP 143
              R A+A ++ +     +S  +I    G  +A+++I  V    G      A   L    
Sbjct: 86  TPLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQ 145
Query: 144 GWPFYESFAKRNHIEVRHFDLLP--ERGWEVDLEAVEALADENTAAIVII-----NPCNP 196
            + +Y+            F  +P  ++G  VDL   +          V I        NP
Sbjct: 146 AFKYYDP----------EFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNP 195
Query: 197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISK 256
            G  ++    +K+ E A +   L++ D  Y  L +   P  P+  F     VI LG+ SK
Sbjct: 196 AGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK 255
Query: 257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC 289
             + PG+R GW+A + P+ + +      SI  C
Sbjct: 256 -ILAPGFRIGWVAAH-PHLIRKMEIAKQSIDLC 286

>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From Pseudomonas Aeruginosa Length = 412

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 81  NCYAPMFGLPLARRAVAE-YLNRDLPYKLSAD---DIYITLGCMEAVEIILTVITRLGAA 136
           + Y+   G+P  RRA++  Y +R   Y +  D   +  +T+G  E +  ++      G  
Sbjct: 69  HGYSTSRGIPRLRRAISHWYRDR---YDVQIDPESEAIVTIGSKEGLAHLMLATLDHGD- 124
Query: 137 NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNP 196
            IL+P P +P +   A     +VR   L+P   +  +LE     +      +++  P NP
Sbjct: 125 TILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNP 184
Query: 197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSI 254
               +     +++   A++  ++V+ D  Y  + +     P I M V G+    +   ++
Sbjct: 185 TAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSI-MQVPGAKDIAVEFFTL 243
Query: 255 SKRWIVPGWRFGWLATN 271
           SK + + GWR G++  N
Sbjct: 244 SKSYNMAGWRIGFMVGN 260

>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase (Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50 A Resolution Length = 444

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 90/221 (40%), Gaps = 41/221 (18%)
Query: 45  RPVIPLGHGDPAAFPCFRT------AAVAEDAIVDSVRSSMF---NCYAPMFGLPLARRA 95
           +PV  LG G+PA              A+  D       SS       Y+   G      A
Sbjct: 32  QPVNXLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISXANYSNPQGDSAFIDA 91
Query: 96  VAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-------------TRLGAANILLPR 142
           +  + NR   + L++++I +T G   A   +  +              ++    +ILLP 
Sbjct: 92  LVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPL 151
Query: 143 PGWPFYESFAKRNHIEVRHFD-LLP---------ERG---WEVDLEAVE---ALADENTA 186
              P Y  ++   H+E +HF  +LP         E G   + VD EA+E   AL +    
Sbjct: 152 T--PEYIGYSDV-HVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIG 208
Query: 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG 227
           AI    P NP GNVLT +    +AE A++  I +I D  YG
Sbjct: 209 AICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAYG 249

>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola Contains A Pyridoxal 5'-Phosphate Cofactor Length = 399

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 11/189 (5%)
Query: 93  RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA 152
           ++ V +++     + +  D I  T G + AV   +   T+ G   I++    +PF+ +  
Sbjct: 72  KKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAI- 130
Query: 153 KRNHIEVRHFDLLPERGW-EVDLEAVEALA-DENTAAIVIINPCNPCGNVLTYQHLQKIA 210
           K    ++   +LL + G+  +D + +E L+ D+N  A++  +P NP G V     LQKI 
Sbjct: 131 KNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIK 190
Query: 211 ETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI-----VPVITLGSISKRWIVPGWRF 265
           +   K  +++ +DE++  L     P     VF SI        IT  + SK + + G   
Sbjct: 191 DIVLKSDLMLWSDEIHFDLIM---PGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGM 247
Query: 266 GWLATNDPN 274
             +   +P+
Sbjct: 248 SNIIIKNPD 256

>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase From Clostridium Difficile 630 Crystallized With Magnesium Formate Length = 391

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/148 (21%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 95  AVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKR 154
           ++  +L R   +K+ ++ +  + G + A+ +++  +T+     I++  P +  + S  K 
Sbjct: 75  SIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDK-IMIQEPVYSPFNSVVKN 133
Query: 155 NHIE--VRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
           N+ E  +     L    + +D E +E    ++    ++ NP NP G V T   L+K+ + 
Sbjct: 134 NNRELIISPLQKLENGNYIMDYEDIENKI-KDVKLFILCNPHNPVGRVWTKDELKKLGDI 192
Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMG 240
             K  + +I+DE++  +      +IPM 
Sbjct: 193 CLKHNVKIISDEIHSDIILKKHKHIPMA 220

>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C. 2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus Ncfm At 2.15 A Resolution Length = 533

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL-GILVIADEV 225
           +  WE++   +E L D +  A++++NP NP         L  I +   K   + +I+DEV
Sbjct: 227 KNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLXIISDEV 286
Query: 226 YGHLAFGSTPYIP-MGVFGSIVPVIT--LGSISKRWIVPGWRFGWLATNDPN 274
           YG        ++P      S+VP  T  + S S  +   GWR G +A N+ N
Sbjct: 287 YG-------AFVPNFKSIYSVVPYNTXLVYSYSXLFGCTGWRLGVIALNEKN 331

>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate Aminotransferase From Clostridium Acetobutylicum Length = 361

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 100 LNRDLPYKLSADDIYITLG--CMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHI 157
           LN+ +   L   DI I LG    E +E+ +++  +     IL+  P +  YE  AK++ +
Sbjct: 66  LNKSIENYLKLKDIGIVLGNGASEIIELSISLFEK-----ILIIVPSYAEYEINAKKHGV 120
Query: 158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ---HLQKIAETAR 214
            V  F  L E    +D E + +  D+   +++I NP NP G ++  +   H+ K+AE  +
Sbjct: 121 SVV-FSYLDENMC-IDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKK 177
Query: 215 KLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273
           K    +I DE +  + F   P    +G   +   +  + +++K + +PG RFG+  TN+ 
Sbjct: 178 KT---IIIDEAF--IEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNK 232

>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate Aminotransferase From Chlamydia Trachomatis Length = 400

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 106/264 (40%), Gaps = 36/264 (13%)
Query: 13  VKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIV 72
            K  L  + +  VA FR           +N    VI L  GD    P    A+VAE A  
Sbjct: 11  TKNYLFADLQKRVAQFRL----------ENPQHTVINLSIGDTTQ-PL--NASVAE-AFA 56
Query: 73  DSVR--SSMFNC--YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILT 128
            S+   SS   C  Y P FGLP  R+ ++E   R     + A +I+I+ G   A   +  
Sbjct: 57  SSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGF---VDAKEIFISDG---AKVDLFR 110
Query: 129 VITRLGA-ANILLPRPGWPFYESFAKRNHI-EVRHFDLLPERGWEVDLEAVEALADENTA 186
           +++  G    + +  P +P Y   A+     E+     L E  +  +        D +  
Sbjct: 111 LLSFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE-----DTHID 165
Query: 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF---G 243
            + + +P NP G VL    L+ I   A +  IL++ D  Y    F S P +P  +F    
Sbjct: 166 ILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYS--TFISDPSLPKSIFEIPD 223
Query: 244 SIVPVITLGSISKRWIVPGWRFGW 267
           +    I + S SK     G R GW
Sbjct: 224 ARFCAIEINSFSKPLGFAGIRLGW 247

>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A Modulator In Mal Gene Expression Length = 390

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 146 PFYESFAKRNHIEVRHFDLLP------ERGWEVDLEAVEA-LADENTAAIVIINPCNPCG 198
           P Y++F K   IE     ++P        GW  D+  +EA LA      +++ +P NP G
Sbjct: 119 PAYDAFYKA--IEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTG 176
Query: 199 NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP 238
            V T   L+ +A+   + G+ VI+DE++  + +G  P+IP
Sbjct: 177 KVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIP 216

>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1) From Helicobacter Pylori 26695 At 2.19 A Resolution Length = 376

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 104/258 (40%), Gaps = 28/258 (10%)
Query: 48  IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK 107
           + LG G+P     F T    +DA+ +   S   N Y         R A   +  R    +
Sbjct: 26  LDLGIGEPQ----FETPKFIQDALKNHTHS--LNIYPKSAFEESLRAAQRGFFKRRFKIE 79
Query: 108 LSADDIYITLGCMEAV-EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP 166
           L  +++  TLG  E +      V+       I  P P +  YE  AK     ++   LL 
Sbjct: 80  LKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKF----IKAKSLLX 135
Query: 167 ERGWEVDLEAVEALADENTAAIVIIN-PCNPCGNVLTYQHLQKIAETARKLGILVIADEV 225
               E D        +     +VI+N P NP G  L+ + L    + A K   ++I DE 
Sbjct: 136 PLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDEC 195
Query: 226 YGHLAFGSTPYIPMGVF--------GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL 277
           Y  + + +TP  P  +          +   V+ + S+SKR   PG R G++A +  + +L
Sbjct: 196 YSEI-YENTP--PPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGD--SRLL 250
Query: 278 QKSGIVGSIKACLGVRSG 295
           +K     + +A LG  S 
Sbjct: 251 EK---YKAFRAYLGYTSA 265

>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium Diphtheriae At 1.99 A Resolution Length = 377

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 12/236 (5%)
Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120
           F T      AI D+V+   F  Y P     L  +A AE+      Y+   + I+     +
Sbjct: 35  FSTCPAVLQAITDAVQREAFG-YQP--DGSLLSQATAEFYADRYGYQARPEWIFPIPDVV 91
Query: 121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL 180
             + I +   T    + +++P P +P +         E    D        ++L  VE  
Sbjct: 92  RGLYIAIDHFTP-AQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKG 146
Query: 181 ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG 240
                 +I++ NP NP G V   + L ++ + A +    V+ DE++  L F     +  G
Sbjct: 147 FQAGARSILLCNPYNPLGXVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAG 206
Query: 241 VFGSIVPV-ITLGSISKRWIVPGWRFGWLATNDPNGV---LQKSGIVGSIKACLGV 292
           V  +   V IT+ + S  W + G +   +  ++P+      Q S ++    + LG+
Sbjct: 207 VSDTAASVCITITAPSXAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGL 262

>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp Length = 428

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL--GCMEAVEIILTVITRLGAANILL 140
           +    GLP  R+A+A+++ +    ++  D   + +  G   A E I+  +   G A  L+
Sbjct: 79  FQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDA-FLV 137
Query: 141 PRPGWP-FYESFAKRNHIEVRHFDLLPERGWEVDLEAV-EALADENTAAI-----VIINP 193
           P P +P F      R  +++          +++  +AV EA  +   + I     ++ NP
Sbjct: 138 PSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNP 197
Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG--------VFGSI 245
            NP G  L    L+ +     +  I ++ DE+Y    F +  ++ +          + + 
Sbjct: 198 SNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNK 257
Query: 246 VPVITLGSISKRWIVPGWRFG 266
             V  + S+SK   +PG+R G
Sbjct: 258 DLVHIVYSLSKDMGLPGFRVG 278

>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent Aminotransferase (Lbul_1103) From Lactobacillus Delbrueckii Subsp. At 1.61 A Resolution Length = 391

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 18/172 (10%)
Query: 94  RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK 153
           +AVA++   +   +   D      G + A+   +   T  G   IL+  P +  + S  +
Sbjct: 69  KAVADWEEIEHRARPKEDWCVFASGVVPAISAXVRQFTSPGD-QILVQEPVYNXFYSVIE 127
Query: 154 RNHIEVRHFDLLPERG-----WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQK 208
            N   V   DL+ E       W  DLE  E LA  +    V  NP NP G   + + +++
Sbjct: 128 GNGRRVISSDLIYENSKYSVNW-ADLE--EKLATPSVRXXVFCNPHNPIGYAWSEEEVKR 184
Query: 209 IAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIV 260
           IAE   K  +L+I+DE++G L               I P  T+   +K W+V
Sbjct: 185 IAELCAKHQVLLISDEIHGDLVLTDE---------DITPAFTVDWDAKNWVV 227

>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate Aminotransferase From Listeria Innocua Clip11262. Length = 363

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 93  RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA 152
           R+ VA++      Y+L  +++  T G  E +E++  V+      N +   P +  Y   A
Sbjct: 73  RKEVADF------YQLEEEELIFTAGVDELIELLTRVLLDT-TTNTVXATPTFVQYRQNA 125
Query: 153 KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
                EVR   LL +   E DLE      DE T  + I NP NP GN +    +Q   + 
Sbjct: 126 LIEGAEVREIPLLQD--GEHDLEGXLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDR 183
Query: 213 ARKLGILVIADEVY 226
                +LV+ DE Y
Sbjct: 184 VPS-DVLVVLDEAY 196

>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131) From Thermotoga Maritima Msb8 At 1.82 A Resolution Length = 425

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 19/237 (8%)
Query: 45  RPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR 102
           +  I  G G  DP  FP    A +A++ I      ++   Y+   G P+ ++ + + L R
Sbjct: 43  KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTL--QYSTTEGDPVLKQQILKLLER 100
Query: 103 DLPYK-LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRH 161
                 L  D++  T+G  +A+++I  +     +  +L      P Y          + +
Sbjct: 101 XYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVL----DDPAYLGAINAFRQYLAN 156
Query: 162 FDLLPERGWEVDLEAVE---ALADENTAA------IVIINPCNPCGNVLTYQHLQKIAET 212
           F ++P      DL  +E   +  D+N          V+ N  NP G   + +  + + E 
Sbjct: 157 FVVVPLEDDGXDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEI 216
Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269
           A K  + ++ D+ YG L +      P+   G    V+ L + SK  + PG R G +A
Sbjct: 217 AEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSK-VLAPGLRIGXVA 272

>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From Silicibacter Pomeroyi Length = 391

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 16/205 (7%)
Query: 67  AEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEII 126
           A +A+  S+ +     Y    GLP  R+ +A          L    + IT G      + 
Sbjct: 49  AVEALAKSLETDALG-YTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLA 107
Query: 127 LTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP---ERGWEVDLEAVEA-LAD 182
            T +   G   + +  PG+P Y          +R   L+P       E  L+ V A  A 
Sbjct: 108 FTALFDSGD-RVGIGAPGYPSYRQI-------LRALGLVPVDLPTAPENRLQPVPADFAG 159
Query: 183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242
            + A + + +P NP G  L +     + E A+  G   I+DE+Y  + + +     + + 
Sbjct: 160 LDLAGLXVASPANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELT 219
Query: 243 GSIVPVITLGSISKRWIVPGWRFGW 267
                   + S SK +   GWR GW
Sbjct: 220 DE---CYVINSFSKYFSXTGWRVGW 241

>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta (Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A Resolution Length = 417

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 100/258 (38%), Gaps = 24/258 (9%)
Query: 31  AIVSLMESVDKNDPRP-VIPLGHGDPAAFPCFRT--AAVAEDAIVDSVRSSMFNCYAPMF 87
            I  L E ++     P  I LG G+PA  P  +     +  D +     +     Y    
Sbjct: 16  GITRLXEDLNDGLRTPGAIXLGGGNPAHIPAXQDYFQTLLTDXVESGKAADALCNYDGPQ 75
Query: 88  GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT--RLGAANILLPRPGW 145
           G      A+A  L   L + +   +I +T G   A   +  +    R   +   +  P  
Sbjct: 76  GKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLA 135
Query: 146 PFYESFAKRN-----HIEVR-HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGN 199
           P Y  +A         +  R + +LLPE  ++  ++       E T  I +  P NP GN
Sbjct: 136 PEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGXICVSRPTNPTGN 195
Query: 200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSI 254
           V+T + L K+   A +  I ++ D  YG       P+ P  +F    P     +I   S+
Sbjct: 196 VITDEELXKLDRLANQHNIPLVIDNAYG------VPF-PGIIFSEARPLWNPNIILCXSL 248
Query: 255 SKRWIVPGWRFGWLATND 272
           SK  + PG R G +  ND
Sbjct: 249 SKLGL-PGSRCGIIIAND 265

>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase (Ttha0342) From Thermus Thermophilus Hb8 Length = 376

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Query: 117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER-GWEVDLE 175
           +G  E +  +L  +T      +LLP   +P Y  F       +R F L+P R     DL+
Sbjct: 94  IGSQEGLAHLLLALTE-PEDLLLLPEVAYPSY--FGAARVASLRTF-LIPLREDGLADLK 149
Query: 176 AVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP 235
           AV          +++  P NP G V  + + ++    ARK G+ +I D  Y    +    
Sbjct: 150 AVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEA 209
Query: 236 YIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
             P+ + G+   V+ L S+SK + + G+R G+
Sbjct: 210 PSPLALPGAKERVVELFSLSKSYNLAGFRLGF 241

>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-malate Ion Length = 432

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 88/236 (37%), Gaps = 27/236 (11%)
Query: 47  VIPLGHGDPAA-FPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLP 105
           VI LG GD     P   T+A+A+ A   S     ++ Y    G    R A+A+     L 
Sbjct: 58  VISLGIGDTTEPIPEVITSAMAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 106 YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY--------------ESF 151
             +  DD++++ G     +I    +       I +  P +P Y                 
Sbjct: 116 -GIGDDDVFVSDGA--KCDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDV 172
Query: 152 AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
            K  +IE  +    PE G+  DL  V       T  I   +P NP G   T + L ++ E
Sbjct: 173 QKYGNIE--YMRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVE 225
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
            A+K G +++ D  Y        P     + G+    +   S SK     G R GW
Sbjct: 226 FAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSKYAGFTGVRLGW 281

>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase Length = 544

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 14/115 (12%)
Query: 166 PERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE--TARKLGILVIAD 223
           P+ GW+     ++ L D +      +NP NP    +  + L ++      ++  +L++ D
Sbjct: 226 PDNGWQYSDAELDKLKDPDVKIFFCVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTD 285
Query: 224 EVYGHLA--FGSTPYIPMGVFGSIVPVITL--GSISKRWIVPGWRFGWLATNDPN 274
           +VYG  A  F S          S+ P  TL   S SK +   GWR G +A +  N
Sbjct: 286 DVYGTFADEFQS--------LFSVCPRNTLLVYSFSKYFGATGWRLGVIAAHKDN 332

>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase (Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15 A Resolution Length = 407

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 111 DDIYITLGCMEAVEI-ILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP--- 166
           D + IT G   A+ + +   + R     I+ P       + FA R  +E    + +P   
Sbjct: 103 DGLIITPGTQGALFLAVAATVARGDKVAIVQP-------DYFANRKLVEFFEGEXVPVQL 155
Query: 167 ------ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220
                 E    +DL  +E          +  NP NP G V + + + +IA  A + G  V
Sbjct: 156 DYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATV 215
Query: 221 IADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIVPGWRFG 266
           IAD++Y  L +    Y  +    ++    V+T+   S    + G+R G
Sbjct: 216 IADQLYSRLRYAGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG 263

>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-Glu: External Aldimine Form Length = 432

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 88/236 (37%), Gaps = 27/236 (11%)
Query: 47  VIPLGHGDPAA-FPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLP 105
           VI LG GD     P   T+A+A+ A   S     ++ Y    G    R A+A+     L 
Sbjct: 58  VISLGIGDTTEPIPEVITSAMAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 106 YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY--------------ESF 151
             +  DD++++ G     +I    +       I +  P +P Y                 
Sbjct: 116 -GIGDDDVFVSDGA--KCDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDV 172
Query: 152 AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
            K  +IE  +    PE G+  DL  V       T  I   +P NP G   T + L ++ E
Sbjct: 173 QKYGNIE--YMRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVE 225
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
            A+K G +++ D  Y        P     + G+    +   S S+     G R GW
Sbjct: 226 FAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSQYAGFTGVRLGW 281

>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Length = 432

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 86/236 (36%), Gaps = 27/236 (11%)
Query: 47  VIPLGHGDPAA-FPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLP 105
           VI LG GD     P   T+A A+ A   S     ++ Y    G    R A+A+     L 
Sbjct: 58  VISLGIGDTTEPIPEVITSAXAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 106 YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY--------------ESF 151
             +  DD++++ G     +I    +       I +  P +P Y                 
Sbjct: 116 -GIGDDDVFVSDGAK--CDISRLQVXFGSNVTIAVQDPSYPAYVDSSVIXGQTGQFNTDV 172
Query: 152 AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
            K  +IE  +    PE G+  DL  V       T  I   +P NP G   T + L ++ E
Sbjct: 173 QKYGNIE--YXRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVE 225
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
            A+K G +++ D  Y        P     + G+        S SK     G R GW
Sbjct: 226 FAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVAXETASFSKYAGFTGVRLGW 281

>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS---TPYIPMGVFGSIVPV 248
           N  NP GN LT +  ++I E ARK   L+I D+ Y  L F S     ++ M V G ++  
Sbjct: 199 NGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRA 258
Query: 249 ITLGSISKRWIVPGWRFGWLATNDP 273
            +   I    I  G R G+L    P
Sbjct: 259 DSFSKI----ISSGLRIGFLTGPKP 279

>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS---TPYIPMGVFGSIVPV 248
           N  NP GN LT +  ++I E ARK   L+I D+ Y  L F S     ++ M V G ++  
Sbjct: 199 NGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRA 258
Query: 249 ITLGSISKRWIVPGWRFGWLATNDP 273
            +   I    I  G R G+L    P
Sbjct: 259 DSFSKI----ISSGLRIGFLTGPKP 279

>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With Ll-Dap: External Aldimine Form Length = 432

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 87/236 (36%), Gaps = 27/236 (11%)
Query: 47  VIPLGHGDPAA-FPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLP 105
           VI LG GD     P   T+A+A+ A   S     ++ Y    G    R A+A+     L 
Sbjct: 58  VISLGIGDTTEPIPEVITSAMAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 106 YKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY--------------ESF 151
             +  DD++++ G     +I    +       I +  P +P Y                 
Sbjct: 116 -GIGDDDVFVSDGA--KCDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDV 172
Query: 152 AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAE 211
            K  +IE  +    PE G+  DL  V       T  I   +P NP G   T + L ++ E
Sbjct: 173 QKYGNIE--YMRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVE 225
Query: 212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
            A+K G +++ D  Y        P     + G+    +   S S      G R GW
Sbjct: 226 FAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGW 281

>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum In Complex With Pmp Length = 369

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 15/205 (7%)
Query: 70  AIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTV 129
           A VD + + + N Y     + L R  +A Y+ +     ++ D+++   G  E ++ +L  
Sbjct: 54  ATVDKIATEL-NRYPERDAVEL-RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQA 111
Query: 130 ITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERG--WEVDLE-AVEALADENTA 186
               G   +   +P +  +   AK  H E     +   RG  + +D++ A+E +  +   
Sbjct: 112 FGGPGRTALGF-QPSYSMHPILAKGTHTEF----IAVSRGADFRIDMDVALEEIRAKQPD 166
Query: 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246
            + +  P NP G+V +   +++I   A     +VI DE Y    F  +P     +     
Sbjct: 167 IVFVTTPNNPTGDVTSLDDVERIINVAPG---IVIVDEAYAE--FSPSPSATTLLEKYPT 221
Query: 247 PVITLGSISKRWIVPGWRFGWLATN 271
            ++   ++SK +   G R G+   N
Sbjct: 222 KLVVSRTMSKAFDFAGGRLGYFVAN 246

>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Length = 376

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 15/205 (7%)
Query: 70  AIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTV 129
           A VD + + + N Y     + L R  +A Y+ +     ++ D+++   G  E ++ +L  
Sbjct: 51  ATVDKIATEL-NRYPERDAVEL-RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQA 108
Query: 130 ITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERG--WEVDLE-AVEALADENTA 186
               G   +   +P +  +   AK  H E     +   RG  + +D++ A+E +  +   
Sbjct: 109 FGGPGRTALGF-QPSYSMHPILAKGTHTEF----IAVSRGADFRIDMDVALEEIRAKQPD 163
Query: 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246
            + +  P NP G+V +   +++I   A     +VI DE Y    F  +P     +     
Sbjct: 164 IVFVTTPNNPTGDVTSLDDVERIINVAPG---IVIVDEAYAE--FSPSPSATTLLEKYPT 218
Query: 247 PVITLGSISKRWIVPGWRFGWLATN 271
            ++   ++SK +   G R G+   N
Sbjct: 219 KLVVSRTMSKAFDFAGGRLGYFVAN 243

>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex Length = 425

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS---TPYIPMGVFGSIVPV 248
           N  NP GN LT +  ++I E ARK   L+I D+ Y  L F       ++ M V G ++  
Sbjct: 199 NGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRA 258
Query: 249 ITLGSISKRWIVPGWRFGWLATNDP 273
            +   I    I  G R G+L    P
Sbjct: 259 DSFSKI----ISSGLRIGFLTGPKP 279

>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS---TPYIPMGVFGSIVPV 248
           N  NP GN LT +  ++I E ARK   L+I D+ Y  L F       ++ M V G ++  
Sbjct: 199 NGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRA 258
Query: 249 ITLGSISKRWIVPGWRFGWLATNDP 273
            +   I    I  G R G+L    P
Sbjct: 259 DSFSKI----ISSGLRIGFLTGPKP 279

>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase Ii In Complex With Kynurenine Length = 425

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS---TPYIPMGVFGSIVPV 248
           N  NP GN LT +  ++I E ARK   L+I D+ Y  L F       ++ M V G ++  
Sbjct: 199 NGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRA 258
Query: 249 ITLGSISKRWIVPGWRFGWLATNDP 273
            +   I    I  G R G+L    P
Sbjct: 259 DSFSKI----ISSGLRIGFLTGPKP 279

>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 427

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS---TPYIPMGVFGSIVPV 248
           N  NP GN LT +  ++I E ARK   L+I D+ Y  L F       ++ M V G ++  
Sbjct: 201 NGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRA 260
Query: 249 ITLGSISKRWIVPGWRFGWLATNDP 273
            +   I    I  G R G+L    P
Sbjct: 261 DSFSXI----ISSGLRIGFLTGPKP 281

>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 425

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS---TPYIPMGVFGSIVPV 248
           N  NP GN LT +  ++I E ARK   L+I D+ Y  L F       ++ M V G ++  
Sbjct: 199 NGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRA 258
Query: 249 ITLGSISKRWIVPGWRFGWLATNDP 273
            +   I    I  G R G+L    P
Sbjct: 259 DSFSXI----ISSGLRIGFLTGPKP 279

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	311
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	1e-110
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	1e-102
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	5e-43
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	7e-42
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	3e-40
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	8e-39
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	9e-39
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	2e-36
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	6e-36
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	1e-35
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	3e-35
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	8e-35
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	3e-34
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	6e-34
3ele_A	398	Amino transferase; RER070207001803, structural gen	6e-34
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	9e-34
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	9e-34
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	3e-33
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	5e-33
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	9e-33
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	2e-30
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	2e-30
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	3e-29
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	2e-28
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	2e-28
3nra_A	407	Aspartate aminotransferase; structural genomics, j	6e-28
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	3e-27
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	3e-27
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	4e-27
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	5e-25
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	2e-24
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	8e-24
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	2e-23
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	2e-23
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	6e-23
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	7e-23
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	9e-23
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	4e-22
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	6e-22
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	1e-21
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	1e-20
1vp4_A	425	Aminotransferase, putative; structural genomics, j	2e-20
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	7e-20
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	3e-18
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	3e-18
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	8e-17
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	1e-16
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	3e-16
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	6e-16
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	8e-16
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	9e-16
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	9e-16
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	1e-15
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	2e-15
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	2e-15
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	1e-14
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	1e-14
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	2e-14
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	5e-14
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	3e-13
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	4e-13
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	1e-12
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	3e-11
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	4e-10
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	6e-10
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	8e-10
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	2e-08
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	3e-08
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	3e-08
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	1e-07
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	1e-07
3rq1_A	418	Aminotransferase class I and II; structural genomi	1e-07
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	7e-07
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	8e-07
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	1e-06
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	2e-06
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	3e-06
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	3e-06
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	4e-06
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	5e-06
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	1e-05
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	1e-05
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	1e-05
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	2e-05
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	2e-05
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	3e-05
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	3e-05
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	3e-05
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	4e-05
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	5e-05
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	5e-05
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	7e-05
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	1e-04
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	2e-04
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	2e-04
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	3e-04
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	4e-04
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	6e-04
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	7e-04
3hmu_A	472	Aminotransferase, class III; structural genomics,	8e-04
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	9e-04

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A* Length = 427

 Score =  326 bits (837), Expect = e-110
 Identities = 98/303 (32%), Positives = 159/303 (52%), Gaps = 13/303 (4%)

Query: 1   MENEAEKKWGFEVKQELNREREAEVAAFRYAIVSLMES--VDKNDPRPVIPLGHGDPAAF 58
                +  W         +            I +++++  V  N  + +I L  GDP  F
Sbjct: 16  ENLYFQSMWSVRPSDMAKKTF--------NPIRAIVDNMKVKPNPNKTMISLSIGDPTVF 67

Query: 59  PCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG 118
               T      A+ D++ S  +N YAP  G   +R  +A Y +      L A D+ +T G
Sbjct: 68  GNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-EAPLEAKDVILTSG 126

Query: 119 CMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVE 178
           C +A+++ L V+   G  NIL+PRPG+  Y++ A+   IEV+ ++LLPE+ WE+DL+ +E
Sbjct: 127 CSQAIDLCLAVLANPGQ-NILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLE 185

Query: 179 ALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP 238
            L DE TA +++ NP NPCG+V + +HLQKI   A +  + ++ADE+YG + F    Y P
Sbjct: 186 YLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEP 245

Query: 239 MGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPST 298
           +    + VP+++ G ++KRW+VPGWR GW+  +D   +     I   +        GP T
Sbjct: 246 LATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNE-IRDGLVKLSQRILGPCT 304

Query: 299 LIQ 301
           ++Q
Sbjct: 305 IVQ 307

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1 Length = 416

 Score =  305 bits (784), Expect = e-102
 Identities = 81/283 (28%), Positives = 138/283 (48%), Gaps = 14/283 (4%)

Query: 30  YAIVSLMESVD-KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFG 88
             I ++ ++      P+P+I L  GDP       T+A     + +++ S   N Y P  G
Sbjct: 17  NPIRTVSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVG 76

Query: 89  LPLARRAVAEYLNR------DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
            P AR AVA +         +L   +  D++ +  G    + + +T I   G    L+P+
Sbjct: 77  SPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGD-YALVPQ 135

Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
           PG+P YE+  K   I +  ++  PE  WE DL+ +  L D+ T  +++ NP NPCG+  +
Sbjct: 136 PGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFS 195

Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFG----STPYIPMGVFGSIVPVITLGSISKRW 258
            +H++ I   A +L + + +DE+Y  + F     +  +  +  F + VP + LG  +K  
Sbjct: 196 RKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNL 255

Query: 259 IVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQ 301
           +VPGWR GWL   DP+G       +  +K    +  GP T++Q
Sbjct: 256 VVPGWRLGWLLYVDPHGNGPS--FLEGLKRVGMLVCGPCTVVQ 296

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis} Length = 437

 Score =  152 bits (385), Expect = 5e-43
 Identities = 51/253 (20%), Positives = 91/253 (35%), Gaps = 15/253 (5%)

Query: 31  AIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLP 90
            +V+L+ +++K        +  G P          +  +  +  +R  + + Y  + GLP
Sbjct: 30  DLVALVTNLEKATGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLP 85

Query: 91  LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGA---ANILLPRPGWPF 147
             ++  + +    +   + A     T+G M+   +   V  R         L   PG+  
Sbjct: 86  ELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNL 145

Query: 148 YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQ 207
            +   +    +   FDL   RG ++  +    L      +I+  NP NP    +T + L+
Sbjct: 146 NKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELR 205

Query: 208 KIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-------VITLGSISKRWIV 260
            I E A K  ++VI D  Y  + F    Y   G               I   S SK +  
Sbjct: 206 IIGELATKHDVIVIEDLAYFGMDFRK-DYSHPGEPLYQPSVANYTDNYILALSSSKAFSY 264

Query: 261 PGWRFGWLATNDP 273
            G R G L  +  
Sbjct: 265 AGQRIGVLMISGK 277

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1 Length = 406

 Score =  148 bits (376), Expect = 7e-42
 Identities = 73/261 (27%), Positives = 120/261 (45%), Gaps = 6/261 (2%)

Query: 41  KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL 100
           +     VI L  GDP  F  F+     ++A   +++    N Y    GLP  R+A+ E  
Sbjct: 34  EKKGIKVIRLNIGDPVKFD-FQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVERE 91

Query: 101 NRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR 160
            R     ++ DD+ +T    EA+++I   +   G   IL+P P +P Y    K    +  
Sbjct: 92  KRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGD-EILVPGPSYPPYTGLVKFYGGKPV 150

Query: 161 HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220
            +  + E  W+ D++ +     + T AI +INP NP G +   + L++I   A +  I V
Sbjct: 151 EYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPV 210

Query: 221 IADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS 280
           I+DE+Y  + +    +I  G     VPVI +  +SK +   GWR G++   DP   L   
Sbjct: 211 ISDEIYDLMTYEGE-HISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLS-- 267

Query: 281 GIVGSIKACLGVRSGPSTLIQ 301
            +  +I     +R  P+T  Q
Sbjct: 268 EVREAIDRLARIRLCPNTPAQ 288

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A* Length = 375

 Score =  143 bits (363), Expect = 3e-40
 Identities = 54/259 (20%), Positives = 95/259 (36%), Gaps = 31/259 (11%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106
           +  L   +      F  +    +     ++      Y  + G P  +++V++        
Sbjct: 29  ISSLTLEEL-----FALSGTNPEDFYKKLQG-TKLNYGWIEGSPAFKKSVSQLYTG---- 78

Query: 107 KLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP 166
            +  + I  T G   A  ++L  +   G  +++   P +       K    EV  + +  
Sbjct: 79  -VKPEQILQTNGATGANLLVLYSLIEPGD-HVISLYPTYQQLYDIPKSLGAEVDLWQIEE 136

Query: 167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY 226
           E GW  DLE +  L    T  I I N  NP G V+   +L+++ E A ++G  +++DEVY
Sbjct: 137 ENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVY 196

Query: 227 GHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSI 286
              +    P I   V+      I + S+SK + +PG R GW+A N               
Sbjct: 197 RSFSELDVPSII-EVYDK---GIAVNSLSKTYSLPGIRIGWVAANHQ-----------VT 241

Query: 287 KACLGVR----SGPSTLIQ 301
                 R            
Sbjct: 242 DILRDYRDYTMICAGVFDD 260

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens} Length = 498

 Score =  142 bits (359), Expect = 8e-39
 Identities = 63/320 (19%), Positives = 116/320 (36%), Gaps = 55/320 (17%)

Query: 25  VAAFRYAI--------VSLMESVDKNDPRP---VIPLGHGDPAAF--------------- 58
           V A  YA+          +   + +   +P   VI    GD  A                
Sbjct: 32  VKAVEYAVRGPIVLKAGEIELELQRGIKKPFTEVIRANIGDAQAMGQQPITFLRQVMALC 91

Query: 59  --------PCFRT-AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLN-RDLPYKL 108
                   P F   A      I+ +   +    Y+   G+   R  VA Y+  RD     
Sbjct: 92  TYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPA 151

Query: 109 SADDIYITLGCMEAVEIILTVITRLG---AANILLPRPGWPFYESFAKRNHIEVRHFDLL 165
             D+IY+T G  + +  IL ++   G      +++P P +P Y +          ++ L 
Sbjct: 152 DPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLD 211

Query: 166 PERGWEVDLEAVEALADENTA-----AIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220
            E  W +++  +     E         + IINP NP G V + + ++ +   A +  + +
Sbjct: 212 EENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFL 271

Query: 221 IADEVYGHLAF-GSTPYIPM--------GVFGSIVPVITLGSISKRWIVP-GWRFGWLA- 269
           +ADEVY    +     +             + S V + +  S SK ++   G+R G++  
Sbjct: 272 LADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEV 331

Query: 270 TNDPNGVLQKSGIVGSIKAC 289
            N    +  +   + S++ C
Sbjct: 332 INLHPEIKGQLVKLLSVRLC 351

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare} Length = 500

 Score =  141 bits (358), Expect = 9e-39
 Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 17/253 (6%)

Query: 54  DPAAFPCFRTAAVA-EDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADD 112
                  F   +++    I+  +       Y+   G+   R A+A  +     +  +ADD
Sbjct: 100 REEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADD 159

Query: 113 IYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEV 172
           I++T G    V +++ ++ R     IL+P P +P Y +    +   +  + L    GW +
Sbjct: 160 IFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGL 219

Query: 173 DLEAVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY 226
           +   V+   ++      N  A+V+INP NP G VL  ++   I +  +  G++++ADEVY
Sbjct: 220 ETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVY 279

Query: 227 GHLAF-GSTPYI-------PMGVFGSIVPVITLGSISKRWI-VPGWRFGWLA-TNDPNGV 276
               +  +  +         +G     +P+++  S+SK +    G R G+   T     V
Sbjct: 280 QENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPV 339

Query: 277 LQKSGIVGSIKAC 289
            ++   + S+  C
Sbjct: 340 REQIYKIASVNLC 352

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3} Length = 391

 Score =  133 bits (337), Expect = 2e-36
 Identities = 47/225 (20%), Positives = 85/225 (37%), Gaps = 12/225 (5%)

Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
           R +I +  G P           A +A+  S+ +     Y    GLP  R+ +A       
Sbjct: 31  RRIIHMEVGQPG----TGAPRGAVEALAKSLETDALG-YTVALGLPALRQRIARLYGEWY 85

Query: 105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL 164
              L    + IT G      +  T +   G   + +  PG+P Y    +   +       
Sbjct: 86  GVDLDPGRVVITPGSSGGFLLAFTALFDSGD-RVGIGAPGYPSYRQILRALGLVPVDLPT 144

Query: 165 LPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224
            PE   +        L   + A +++ +P NP G +L +  +  + E A+  G   I+DE
Sbjct: 145 APENRLQPVPADFAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDE 201

Query: 225 VYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA 269
           +Y  + + +     + +         + S SK + + GWR GW+ 
Sbjct: 202 IYHGIEYEAKAVTALELTDE---CYVINSFSKYFSMTGWRVGWMV 243

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1 Length = 386

 Score =  131 bits (333), Expect = 6e-36
 Identities = 59/229 (25%), Positives = 92/229 (40%), Gaps = 17/229 (7%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106
            I L  G    FP F      ++ +   V     N YAPM G+   R A+A+   R   Y
Sbjct: 32  AINLSQG----FPDFDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGY 86

Query: 107 KLSAD-DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL 165
           +  AD DI +T G  EA+   +T + R G   ++   P +  Y      +   V+   L 
Sbjct: 87  QPDADSDITVTAGATEALYAAITALVRNGD-EVICFDPSYDSYAPAIALSGGIVKRMALQ 145

Query: 166 PERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEV 225
           P   + VD +   AL  E T  +++  P NP   V        + +      I VI+DEV
Sbjct: 146 PP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEV 204

Query: 226 YGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKRWIVPGWRFGWLA 269
           Y H+ F    +  +       P      + + S  K + + GW+ G+  
Sbjct: 205 YEHINFSQQGHASVLAH----PQLRERAVAVSSFGKTYHMTGWKVGYCV 249

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis} Length = 411

 Score =  131 bits (333), Expect = 1e-35
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 17/230 (7%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106
            + LG G    FP          A  D++     N Y P  G    RRA+A    R    
Sbjct: 27  AVNLGQG----FPDEDGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRAIAAQRRRHFGV 81

Query: 107 KLSAD-DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL 165
               + ++ +T+G  EA+   +  +   G+  +LL  P +  Y               L+
Sbjct: 82  DYDPETEVLVTVGATEAIAAAVLGLVEPGS-EVLLIEPFYDSYSPVVAMAGAHRVTVPLV 140

Query: 166 PE-RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224
           P+ RG+ +D +A+       T A++I +P NP G VL+   L  IAE A    ++VI DE
Sbjct: 141 PDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDE 200

Query: 225 VYGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKRWIVPGWRFGWLA 269
           VY HL F    ++P+  F           IT+ S +K +   GW+ GW  
Sbjct: 201 VYEHLVFDHARHLPLAGF----DGMAERTITISSAAKMFNCTGWKIGWAC 246

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae} Length = 447

 Score =  131 bits (331), Expect = 3e-35
 Identities = 59/252 (23%), Positives = 101/252 (40%), Gaps = 24/252 (9%)

Query: 33  VSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLA 92
            +   +  KN  R +I LG G    F  +     A      ++   M N Y+P  G P  
Sbjct: 45  AAKAANNSKNQGRELINLGQG----FFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSL 100

Query: 93  RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA 152
             ++ +  +     +L A+++ +T G  E +   L  +   G   +++  P +  Y    
Sbjct: 101 INSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGD-EVIVFEPFFDQYIPNI 159

Query: 153 KRNHIEVRHFDLLP----------ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
           +    +V +  + P             W +D E  E      T A++I  P NP G V T
Sbjct: 160 ELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFT 219

Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKR 257
            + L  +     K  +++I+DEVY HL F  +         ++ P      +T+GS  K 
Sbjct: 220 REELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIA----TLSPEIGQLTLTVGSAGKS 275

Query: 258 WIVPGWRFGWLA 269
           +   GWR GW+ 
Sbjct: 276 FAATGWRIGWVL 287

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1 Length = 409

 Score =  129 bits (327), Expect = 8e-35
 Identities = 70/270 (25%), Positives = 112/270 (41%), Gaps = 33/270 (12%)

Query: 41  KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL 100
           K     +  L  G P      +T  V  + I ++        Y+   G+   R A A Y 
Sbjct: 39  KKRGVRIHHLNIGQPD----LKTPEVFFERIYENKPE--VVYYSHSAGIWELREAFASYY 92

Query: 101 NRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR 160
            R     +  +++ +T G  EA+     VI   G   IL+  P +  Y +FAK   +++ 
Sbjct: 93  KRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGD-EILVLEPFYANYNAFAKIAGVKLI 151

Query: 161 HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220
                 E G+ +  + +E+  +E T  IV+ NPCNP G V     ++ + E A + G+ +
Sbjct: 152 PVTRRMEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFL 210

Query: 221 IADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKRWIVPGWRFGWLATNDPNG 275
           I DEVY  + F        G F S +      V+ + S+SK++   G R G L T   N 
Sbjct: 211 IVDEVYSEIVFR-------GEFASALSIESDKVVVIDSVSKKFSACGARVGCLIT--RNE 261

Query: 276 VLQKSGIVGSIKACLGV---RSGPSTLIQV 302
            L        I   + +   R  P  L Q+
Sbjct: 262 EL--------ISHAMKLAQGRLAPPLLEQI 283

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A* Length = 381

 Score =  127 bits (321), Expect = 3e-34
 Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 20/226 (8%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106
            + LG G    FP         +A+  ++     + YAP  GLP  R A+AE    +   
Sbjct: 27  AVNLGQG----FPSNPPPPFLLEAVRRALGRQ--DQYAPPAGLPALREALAEEFAVE--- 77

Query: 107 KLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL-L 165
               + + +T G  EA+ ++L  +   G   +++  P +  Y   A     + R   L L
Sbjct: 78  ---PESVVVTSGATEALYVLLQSLVGPGD-EVVVLEPFFDVYLPDAFLAGAKARLVRLDL 133

Query: 166 PERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEV 225
              G+ +DL A+E      T A+++  P NP G V   + L+ IA  AR   + +I+DEV
Sbjct: 134 TPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEV 193

Query: 226 YGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIVPGWRFGWLA 269
           Y  L +G  P           P    T+GS  KR    G+R GW+ 
Sbjct: 194 YDELYYGERPRRLR----EFAPERTFTVGSAGKRLEATGYRVGWIV 235

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A* Length = 428

 Score =  127 bits (322), Expect = 6e-34
 Identities = 45/250 (18%), Positives = 94/250 (37%), Gaps = 23/250 (9%)

Query: 47  VIPLGHGDPAA---FPCFRTAAVAEDAIVDSVRSSM--FNCYAPMFGLPLARRAVAEYLN 101
           VI +G  +                + +I      S      +    GLP  R+A+A+++ 
Sbjct: 38  VIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFME 97

Query: 102 R--DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWP-FYESFAKRNHIE 158
           +      +   + + +  G   A E I+  +   G A  L+P P +P F      R  ++
Sbjct: 98  KTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDA-FLVPSPYYPAFNRDLRWRTGVQ 156

Query: 159 VRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAET 212
           +          +++  +AV+   +           +++ NP NP G  L    L+ +   
Sbjct: 157 LIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSF 216

Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--------VITLGSISKRWIVPGWR 264
             +  I ++ DE+Y    F +  ++ +                V  + S+SK   +PG+R
Sbjct: 217 TNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFR 276

Query: 265 FGWLATNDPN 274
            G + + + +
Sbjct: 277 VGIIYSFNDD 286

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale} Length = 398

 Score =  126 bits (320), Expect = 6e-34
 Identities = 54/241 (22%), Positives = 97/241 (40%), Gaps = 26/241 (10%)

Query: 47  VIPLGHGDPAAFP---CFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD 103
           V     G+P+  P              +V    S   + Y    G    R A+AE+LN  
Sbjct: 37  VYDFSIGNPS-IPAPQIVNDTIKE---LVTDYDSVALHGYTSAQGDVETRAAIAEFLNNT 92

Query: 104 LPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFD 163
                +AD++Y+T+G   ++ I    +T       +   P +P Y+ F       +    
Sbjct: 93  HGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVP 152

Query: 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK------LG 217
              E  +++D +A+E   + +T  ++I +P NP G V + + ++K+++   K        
Sbjct: 153 ADTE-HFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRP 211

Query: 218 ILVIADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKRWIVPGWRFGWLATND 272
           I +IADE Y  + +        G+    V       +   S SK   +PG R G++   D
Sbjct: 212 IFIIADEPYREIVYD-------GIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPD 264

Query: 273 P 273
            
Sbjct: 265 E 265

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium} Length = 417

 Score =  126 bits (320), Expect = 9e-34
 Identities = 56/254 (22%), Positives = 91/254 (35%), Gaps = 14/254 (5%)

Query: 31  AIVSLMESVDKNDPRP-VIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF 87
            I  LME ++     P  I LG G              +  D +     +     Y    
Sbjct: 16  GITRLMEDLNDGLRTPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQ 75

Query: 88  GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLG--AANILLPRPGW 145
           G      A+A  L   L + +   +I +T G   A   +  +        +   +  P  
Sbjct: 76  GKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLA 135

Query: 146 PFYESFAKRNHIEVR------HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGN 199
           P Y  +A     +        + +LLPE  ++  ++       E T  I +  P NP GN
Sbjct: 136 PEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGN 195

Query: 200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI 259
           V+T + L K+   A +  I ++ D  YG    G   +       +   +I   S+SK   
Sbjct: 196 VITDEELMKLDRLANQHNIPLVIDNAYGVPFPG-IIFSEARPLWN-PNIILCMSLSK-LG 252

Query: 260 VPGWRFGWLATNDP 273
           +PG R G +  ND 
Sbjct: 253 LPGSRCGIIIANDK 266

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A* Length = 435

 Score =  127 bits (321), Expect = 9e-34
 Identities = 55/258 (21%), Positives = 99/258 (38%), Gaps = 26/258 (10%)

Query: 42  NDPRPVIPLGHGDPAA---FPCFRTAAVAEDAIVDSVRSSMFN---CYAPMFGLPLARRA 95
           ++   +I +G  +            A   E A       S+F     +    GLP  ++A
Sbjct: 35  HNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKA 94

Query: 96  VAEYLN--RDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWP-FYESFA 152
           + +++   R        + + +T G   A E  +  +   G A +L+P P +P F     
Sbjct: 95  MVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEA-VLIPTPYYPGFDRDLK 153

Query: 153 KRNHIEVRHFDLLPERGWEVDLEAVEA------LADENTAAIVIINPCNPCGNVLTYQHL 206
            R  +E+         G+++   A+E         +     +++ NP NP G  +T   L
Sbjct: 154 WRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNEL 213

Query: 207 QKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP----------VITLGSISK 256
             +       GI +I+DE+Y   AF S  +I +                  V  + S+SK
Sbjct: 214 YLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSK 273

Query: 257 RWIVPGWRFGWLATNDPN 274
              +PG+R G + +ND  
Sbjct: 274 DLGLPGFRVGAIYSNDDM 291

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} PDB: 2zjg_A* 3e2f_A* 3e2z_A* Length = 410

 Score =  125 bits (316), Expect = 3e-33
 Identities = 56/241 (23%), Positives = 95/241 (39%), Gaps = 30/241 (12%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106
           V+ LG G    FP     +  ++ +  +      N Y   FG P   +A++    +    
Sbjct: 25  VVNLGQG----FPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQR 80

Query: 107 KLSAD-DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA---KRNHIEVRHF 162
           ++  + +I + +G   ++   +  +   G   I++     PFY+ +    +         
Sbjct: 81  QIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMV----PFYDCYEPMVRMAGAVPVFI 136

Query: 163 DLLPER---------GWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETA 213
            L  +           W  D   +E+     T AI++  P NP G V T Q LQ IA+  
Sbjct: 137 PLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLC 196

Query: 214 RKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKRWIVPGWRFGWL 268
            K   L I+DEVY  L +    ++ +       P      IT+GS  K + V GW+ GW 
Sbjct: 197 VKHDTLCISDEVYEWLVYTGHTHVKIATL----PGMWERTITIGSAGKTFSVTGWKLGWS 252

Query: 269 A 269
            
Sbjct: 253 I 253

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A* Length = 422

 Score =  125 bits (315), Expect = 5e-33
 Identities = 54/244 (22%), Positives = 95/244 (38%), Gaps = 32/244 (13%)

Query: 46  PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS-SMFNCYAPMFGLPLARRAVAEYLNRDL 104
            V+ LG G    FP F     A +A   +V    M N Y   FG P   + +A +    L
Sbjct: 29  DVVNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELL 84

Query: 105 PYKLSAD-DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA---KRNHIEVR 160
             ++    ++ +T+G   A+      +   G   I++     PF++ +            
Sbjct: 85  GQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIE----PFFDCYEPMTMMAGGRPV 140

Query: 161 HFDLLP----------ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIA 210
              L P             W++D   +       T A+V+  P NP G V + + L+ +A
Sbjct: 141 FVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVA 200

Query: 211 ETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKRWIVPGWRF 265
              ++  ++ I DEVY  + +    +I +       P      +T+GS  K +   GW+ 
Sbjct: 201 SLCQQHDVVCITDEVYQWMVYDGHQHISIASL----PGMWERTLTIGSAGKTFSATGWKV 256

Query: 266 GWLA 269
           GW+ 
Sbjct: 257 GWVL 260

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A* Length = 429

 Score =  124 bits (313), Expect = 9e-33
 Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 31/242 (12%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS--SMFNCYAPMFGLPLARRAVAEYLNRDL 104
            + LG G    FP +     A +A+  +  S   + N Y   FG P   +A+++  ++ +
Sbjct: 39  PLNLGQG----FPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLV 94

Query: 105 PYKLSAD-DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA---KRNHIEVR 160
              ++   ++ +T+G  EA+   +      G   I++     PF++ +    K      R
Sbjct: 95  DRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIE----PFFDCYEPMVKAAGGIPR 150

Query: 161 HFDLLPERG--------WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
              L P +         W +D   +EAL +E T  I+I  P NP G V+    L+ +A  
Sbjct: 151 FIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANL 210

Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKRWIVPGWRFGW 267
            +K  +L ++DEVY H+ F    +I +       P      IT+GS  K + + GW+ GW
Sbjct: 211 CKKWNVLCVSDEVYEHMVFEPFEHIRICTL----PGMWERTITIGSAGKTFSLTGWKIGW 266

Query: 268 LA 269
             
Sbjct: 267 AY 268

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4} Length = 444

 Score =  118 bits (298), Expect = 2e-30
 Identities = 63/280 (22%), Positives = 97/280 (34%), Gaps = 40/280 (14%)

Query: 31  AIVSLMESVDK--NDPRPVIPLGHGDPAAFP----CFRTA--AVAEDAIVDSVRSSMFNC 82
            I  LM+ +       +PV  LG G+PA        F     A+  D       SS    
Sbjct: 16  GISQLMDDLGDALKSDQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIIS 75

Query: 83  ---YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAAN-- 137
              Y+   G      A+  + NR   + L++++I +T G   A   +  +          
Sbjct: 76  MANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHS 135

Query: 138 ------------ILLPRPGWPFYESFAKR---------NHIEVRHFDLLPERGWEVDLEA 176
                       +L   P +  Y               +  EV H        + VD EA
Sbjct: 136 QDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEA 195

Query: 177 VEALA---DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
           +E L    +    AI    P NP GNVLT + +  +AE A++  I +I D  YG      
Sbjct: 196 LENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNI 255

Query: 234 TPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273
                   + +    I   S+SK   +PG R G +  +  
Sbjct: 256 IYSDAHLNWDN--NTILCFSLSK-IGLPGMRTGIIVADAK 292

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm} Length = 533

 Score =  118 bits (298), Expect = 2e-30
 Identities = 48/241 (19%), Positives = 86/241 (35%), Gaps = 27/241 (11%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106
            +   H +           V  + +  +V +   N   P   L    + +  +L      
Sbjct: 105 AVNYCHTELG----LNRDKVVAEWVNGAVAN---NYPVPDRCLVNTEKIINYFLQELSYK 157

Query: 107 KLSAD---DIYITLGCMEAVEIILTVITRLGAAN----ILLPRPGWPFYESFAKRNH--- 156
             +     D++ T G   A+      +           I +  P +  Y    +      
Sbjct: 158 DANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYEL 217

Query: 157 IEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK- 215
           +EV       +  WE++   +E L D +  A++++NP NP         L  I +   K 
Sbjct: 218 VEV-DLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKN 276

Query: 216 LGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIVPGWRFGWLATNDP 273
             +++I+DEVYG                S+VP   + + S SK +   GWR G +A N+ 
Sbjct: 277 PKLMIISDEVYGAFVPNFKS------IYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEK 330

Query: 274 N 274
           N
Sbjct: 331 N 331

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} Length = 376

 Score =  113 bits (286), Expect = 3e-29
 Identities = 56/235 (23%), Positives = 89/235 (37%), Gaps = 17/235 (7%)

Query: 44  PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD 103
            +  + LG G+P     F T    +DA+ +   S   N Y         R A   +  R 
Sbjct: 22  KKRGLDLGIGEP----QFETPKFIQDALKNHTHS--LNIYPKSAFEESLRAAQRGFFKRR 75

Query: 104 LPYKLSADDIYITLGCMEAV-EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHF 162
              +L  +++  TLG  E +      V+       I  P P +  YE  AK    +    
Sbjct: 76  FKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLM 135

Query: 163 DLLPERGWEVDLEAVEALADENTAAIVIIN-PCNPCGNVLTYQHLQKIAETARKLGILVI 221
            L  E  +   L       +     +VI+N P NP G  L+ + L    + A K   ++I
Sbjct: 136 PLTKENDFTPSLNE----KELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILI 191

Query: 222 ADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKRWIVPGWRFGWLATN 271
            DE Y  +   + P   +             V+ + S+SKR   PG R G++A +
Sbjct: 192 NDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGD 246

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii} Length = 370

 Score =  111 bits (280), Expect = 2e-28
 Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 18/233 (7%)

Query: 41  KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL 100
           +++ + VI L  G+P     F T     D  + S++      Y    G+   R  ++E  
Sbjct: 25  ESEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKISELY 79

Query: 101 NRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR 160
                  +  D+I IT G    +   L+ I   G   +L+  P +P Y++F +    +  
Sbjct: 80  KDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGD-EVLIQNPCYPCYKNFIRFLGAKPV 138

Query: 161 HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220
             D   E        ++E    + T AI+I +P NP G V+     ++I E A +    +
Sbjct: 139 FCDFTVE--------SLEEALSDKTKAIIINSPSNPLGEVID----REIYEFAYENIPYI 186

Query: 221 IADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273
           I+DE+Y  L +    Y  +    ++   I +   SK + + GWR G++ +ND 
Sbjct: 187 ISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDE 239

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A* Length = 389

 Score =  111 bits (280), Expect = 2e-28
 Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 10/226 (4%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD--L 104
           VI LG G+P     F T    ++   +++       Y P  GL   R A+AE L +   +
Sbjct: 28  VISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQNGI 82

Query: 105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL 164
                  +I + LG  +A  + L+   + G   +L+P P +  Y         +      
Sbjct: 83  EAD-PKTEIMVLLGANQAFLMGLSAFLKDGEE-VLIPTPAFVSYAPAVILAGGKPVEVPT 140

Query: 165 LPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224
             E  + ++++ ++    + T A++I +PCNP G VLT + L++IA+   +  ++VI+DE
Sbjct: 141 YEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDE 200

Query: 225 VYGHLAFGSTPYIPMGVFGSIVP-VITLGSISKRWIVPGWRFGWLA 269
           VY H  +    +  +     +    IT+   SK + + GWR G++A
Sbjct: 201 VYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVA 246

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides} Length = 407

 Score =  110 bits (278), Expect = 6e-28
 Identities = 46/234 (19%), Positives = 78/234 (33%), Gaps = 19/234 (8%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD--L 104
            +   HGD        T    +              Y    G    R  +A  L      
Sbjct: 41  PVDFSHGDVD-AHE-PTPGAFDLFSAGVQSGG-VQAYTEYRGDLGIRDLLAPRLAAFTGA 97

Query: 105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNH---IEVR- 160
           P   + D + IT G   A+ + +      G   + + +P +       +      + V+ 
Sbjct: 98  PVD-ARDGLIITPGTQGALFLAVAATVARGD-KVAIVQPDYFANRKLVEFFEGEMVPVQL 155

Query: 161 HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220
            +    E    +DL  +E          +  NP NP G V + + + +IA  A + G  V
Sbjct: 156 DYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATV 215

Query: 221 IADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKRWIVPGWRFGWLA 269
           IAD++Y  L +    Y       +        V+T+   SK   + G+R G   
Sbjct: 216 IADQLYSRLRYAGASYTH---LRAEAAVDAENVVTIMGPSKTESLSGYRLGVAF 266

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa} Length = 412

 Score =  108 bits (273), Expect = 3e-27
 Identities = 47/237 (19%), Positives = 94/237 (39%), Gaps = 23/237 (9%)

Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
             +I L  G+P       T     + +    +    + Y+   G+P  RRA++ +     
Sbjct: 37  EDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDR- 91

Query: 105 PYKLSAD---DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRH 161
            Y +  D   +  +T+G  E +  ++      G   IL+P P +P +   A     +VR 
Sbjct: 92  -YDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDT-ILVPNPSYPIHIYGAVIAGAQVRS 149

Query: 162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221
             L+P   +  +LE     +      +++  P NP    +     +++   A++  ++V+
Sbjct: 150 VPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVV 209

Query: 222 ADEVYGHLAFGSTPYIPMGVFGSI--VP-----VITLGSISKRWIVPGWRFGWLATN 271
            D  Y  + +            SI  VP      +   ++SK + + GWR G++  N
Sbjct: 210 HDLAYADIVYDGWKAP------SIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGN 260

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A* Length = 546

 Score =  110 bits (276), Expect = 3e-27
 Identities = 41/241 (17%), Positives = 85/241 (35%), Gaps = 26/241 (10%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD--L 104
            +               AA   + +   +     N   P   L ++ + V +Y+ R+   
Sbjct: 106 SLSYVRDQLG----LDPAAFLHEMVDGILGC---NYPVPPRMLNISEKIVRQYIIREMGA 158

Query: 105 PYKLS-ADDIYITLGCMEAVEIILTVITRLGAAN----ILLPRPGWPFYESFAK--RNHI 157
               S + +++   G   A+  I   +   G       + +  P +  Y    +  +  +
Sbjct: 159 DAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYAL 218

Query: 158 EVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK-- 215
           E    +  P   W+     ++ L D        +NP NP    +  + L+++     +  
Sbjct: 219 EEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHR 278

Query: 216 LGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIVPGWRFGWLATNDP 273
             ++++ D+VYG  A             +I P   + + S SK +   GWR G +A +  
Sbjct: 279 PDLMILTDDVYGTFADDFQS------LFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQ 332

Query: 274 N 274
           N
Sbjct: 333 N 333

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus} Length = 376

 Score =  108 bits (271), Expect = 4e-27
 Identities = 45/230 (19%), Positives = 83/230 (36%), Gaps = 12/230 (5%)

Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
             +I L  G                A+ +++       Y             A +     
Sbjct: 25  VGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGR- 79

Query: 105 PYKLSAD---DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRH 161
            Y +  D   +    +G  E +  +L  +T      +LLP   +P Y   A+   +    
Sbjct: 80  -YGVGLDPRREALALIGSQEGLAHLLLALTEPEDL-LLLPEVAYPSYFGAARVASLRTFL 137

Query: 162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI 221
             L  +     DL+AV          +++  P NP G V  + + ++    ARK G+ +I
Sbjct: 138 IPLRED--GLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLI 195

Query: 222 ADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271
            D  Y    +      P+ + G+   V+ L S+SK + + G+R G+   +
Sbjct: 196 HDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS 245

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus} Length = 404

 Score =  102 bits (257), Expect = 5e-25
 Identities = 47/245 (19%), Positives = 89/245 (36%), Gaps = 11/245 (4%)

Query: 30  YAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGL 89
                 M    ++ P P+I +  G P       T     D    ++       Y    G 
Sbjct: 32  SYFGKTMGRKIEHGPLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGK 87

Query: 90  PLARRAVAEYLNRDLPYKLSAD---DIYITLGCMEAVEIILTVITRLGAANILLPRPGWP 146
              ++A+ ++  R   Y ++ D   ++ I  G    +  + T +   G   +LLP PG+ 
Sbjct: 88  EAFKQAIVDFYQRQ--YNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDY-VLLPDPGYT 144

Query: 147 FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL 206
            Y +       +    +L P   +  D   V++   + T  I +  P NP G+  T +  
Sbjct: 145 DYLAGVLLADGKPVPLNLEPP-HYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVF 203

Query: 207 QKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG 266
            +     +     ++ D  YG   F +     +         I + S+SK + + G+R G
Sbjct: 204 DEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVG 263

Query: 267 WLATN 271
           +   N
Sbjct: 264 FAVGN 268

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491} Length = 396

 Score =  101 bits (253), Expect = 2e-24
 Identities = 61/251 (24%), Positives = 103/251 (41%), Gaps = 18/251 (7%)

Query: 32  IVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPL 91
           +   M+ +   +    +PL  G+P       T  V  DA+  S+       Y    GLP 
Sbjct: 17  LHEAMQGISAPEGMEAVPLHIGEPK----HPTPKVITDALTASLHE--LEKYPLTAGLPE 70

Query: 92  ARRAVAEYLNR--DLPYKLSADDIYITLGCMEA-VEIILTVITRLGAAN---ILLPRPGW 145
            R+A A +L R  D     + ++I   LG  EA    + TV+  +       I+ P P +
Sbjct: 71  LRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFY 130

Query: 146 PFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQH 205
             YE        E+ HF   P   +  D  ++     + T  + + +P NP G+VL    
Sbjct: 131 QIYEGATLLGGGEI-HFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDG 189

Query: 206 LQKIAETARKLGILVIADEVYGHLAFGSTP-----YIPMGVFGSIVPVITLGSISKRWIV 260
            +++ +   K G ++ +DE Y  + F              +  S   ++   S+SKR  V
Sbjct: 190 WKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNV 249

Query: 261 PGWRFGWLATN 271
           PG R G++A +
Sbjct: 250 PGLRSGFVAGD 260

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A* Length = 400

 Score = 99.2 bits (248), Expect = 8e-24
 Identities = 57/243 (23%), Positives = 85/243 (34%), Gaps = 40/243 (16%)

Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVR----SSMFNCYAPMFGLPLARRAVAEYL 100
             VI L  GD    P     A   +A   S+      +    Y P FGLP  R+ ++E  
Sbjct: 33  HTVINLSIGDTT-QP---LNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDF 88

Query: 101 NRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAAN-ILLPRPGWPFYES---FAKRNH 156
            R     + A +I+I+ G    +  +L+     G    + +  P +P Y           
Sbjct: 89  YRGF---VDAKEIFISDGAKVDLFRLLSF---FGPNQTVAIQDPSYPAYLDIARLTGAK- 141

Query: 157 IEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN-PCNPCGNVLTYQHLQKIAETARK 215
            E+     L E  +  +              I+ +  P NP G VL    L+ I   A +
Sbjct: 142 -EIIALPCLQENAFFPEFPEDTH------IDILCLCSPNNPTGTVLNKDQLRAIVHYAIE 194

Query: 216 LGILVIADEVYGHLAFGSTPYIPMGVFGSI--VP-----VITLGSISKRWIVPGWRFGWL 268
             IL++ D  Y        P +P     SI  +P      I + S SK     G R GW 
Sbjct: 195 HEILILFDAAYSTFISD--PSLPK----SIFEIPDARFCAIEINSFSKPLGFAGIRLGWT 248

Query: 269 ATN 271
              
Sbjct: 249 VIP 251

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1 Length = 389

 Score = 98.0 bits (245), Expect = 2e-23
 Identities = 59/272 (21%), Positives = 102/272 (37%), Gaps = 35/272 (12%)

Query: 41  KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL 100
                 VI L  G+P     F T     +  V  ++      Y    G+   R  +A+ +
Sbjct: 37  IKKGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKG-EVKYTDPRGIYELREGIAKRI 91

Query: 101 NRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR 160
                  +S D + +T G  +A+      +   G   +++  P W  Y          V 
Sbjct: 92  GERYKKDISPDQVVVTNGAKQALFNAFMALLDPGD-EVIVFSPVWVSYIPQIILAGGTVN 150

Query: 161 HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220
             +    + ++  LE VE L    T A++I +P NP G V   + L+ +   A+K    +
Sbjct: 151 VVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYI 210

Query: 221 IADEVYGHLAFGSTPYIPMGVFGSIVPV-------ITLGSISKRWIVPGWRFGWLATNDP 273
           I+DEVY  L +          F SI+ V       + +   SK   + GWR G+L +++ 
Sbjct: 211 ISDEVYDSLVYT-------DEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEK 263

Query: 274 NGVLQKSGIVGSIKACLGVR----SGPSTLIQ 301
                         A   ++    S  +T+ Q
Sbjct: 264 -----------VATAVSKIQSHTTSCINTVAQ 284

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A* Length = 385

 Score = 98.0 bits (245), Expect = 2e-23
 Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 37/268 (13%)

Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
             ++ L  G+P     F T    ++A   ++       YAP  G+P  R A+AE   R+ 
Sbjct: 31  VDLVALTAGEPD----FDTPEHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRREN 85

Query: 105 PYKLSADDIYITLGCMEAV-EIILTVITRLGAAN----ILLPRPGWPFYESFAKRNHIEV 159
              ++ ++  +T+G  +A+  +   ++      +    +++  P W  Y    +     V
Sbjct: 86  GLSVTPEETIVTVGGSQALFNLFQAIL------DPGDEVIVLSPYWVSYPEMVRFAGGVV 139

Query: 160 RHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGIL 219
              + LPE G+  D E V       T A+V+ +P NP G V   + L+ +A  A +    
Sbjct: 140 VEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFY 199

Query: 220 VIADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIVPGWRFGWLATNDPNGVL 277
           +++DE+Y HL +    +      G + P   +T+   +K + + GWR G+          
Sbjct: 200 LVSDEIYEHLLYEGEHF----SPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE---- 251

Query: 278 QKSGIVGSIKACLGVR----SGPSTLIQ 301
                   IKA   V     + P T+ Q
Sbjct: 252 -------VIKAMASVSRQSTTSPDTIAQ 272

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A* Length = 427

 Score = 96.9 bits (241), Expect = 6e-23
 Identities = 36/239 (15%), Positives = 66/239 (27%), Gaps = 34/239 (14%)

Query: 44  PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLN 101
                 +  GD      +        A++ S    M   + P   F      + + E   
Sbjct: 55  QGCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHE 114

Query: 102 RDLPYKLSADDIYITLGCMEAVEIILTVITRLGAAN-------ILLPRPGWPFYESFAKR 154
                      I   +G  + +  ++  ++    A        ++   P +P +    K 
Sbjct: 115 VVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTK- 173

Query: 155 NHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETAR 214
                  +       W  +      +++      ++ +P NP G +            A 
Sbjct: 174 -------YFDKKGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGLLR----------HAV 216

Query: 215 KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP 273
             G   I D VY    +    Y            I L ++SK     G RFGW    D 
Sbjct: 217 IKGCKSIYDMVYYWPHYTPIKYKAD-------EDILLFTMSKFTGHSGSRFGWALIKDE 268

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1 Length = 388

 Score = 96.4 bits (241), Expect = 7e-23
 Identities = 56/235 (23%), Positives = 96/235 (40%), Gaps = 24/235 (10%)

Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
             V     G+P     F T     +A   ++       Y P  G P  R A+A+ L RD 
Sbjct: 30  IDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQKLQRDN 84

Query: 105 PYKLSADDIYITLGCMEAV-EIILTVITRLGAAN----ILLPRPGWPFYESFAKRNHIEV 159
                AD+I +T G  +++  ++L +I           +++P P W  Y    K      
Sbjct: 85  GLCYGADNILVTNGGKQSIFNLMLAMI------EPGDEVIIPAPFWVSYPEMVKLAEGTP 138

Query: 160 RHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGIL 219
                  E  ++V  E +       T  +V   P NP G V T   ++ IA+ A + G+ 
Sbjct: 139 VILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLW 198

Query: 220 VIADEVYGHLAFGSTPYIPMGVFGSIVP-----VITLGSISKRWIVPGWRFGWLA 269
           V++DE+Y  + +    ++ +   G+  P      +     +K + + GWR G+LA
Sbjct: 199 VLSDEIYEKILYDDAQHLSI---GAASPEAYERSVVCSGFAKTYAMTGWRVGFLA 250

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A* Length = 397

 Score = 96.1 bits (240), Expect = 9e-23
 Identities = 51/252 (20%), Positives = 96/252 (38%), Gaps = 27/252 (10%)

Query: 31  AIVSLMESVDKNDPRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFG 88
            I  L++   +     ++    G   P  FP    A  A   + +    ++   Y+P  G
Sbjct: 21  TIRELLKLTQRPG---ILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQ--YSPTEG 75

Query: 89  LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY 148
               R  VAE++       +  +++ IT G  +A++++  V    G+  +LL  P   + 
Sbjct: 76  YAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSP-VLLEAPS--YM 126

Query: 149 ESFA--KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPC--NPCGNVLTYQ 204
            +    +             E G   DL+A+E +        + + P   NP G +    
Sbjct: 127 GAIQAFRLQGPRFLTVPAGEE-G--PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLP 183

Query: 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF---GSIVPVITLGSISKRWIVP 261
             +++ +   + G++V+ D+ Y  L FG      +           VI LGS SK  + P
Sbjct: 184 ARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK-VLSP 242

Query: 262 GWRFGWLATNDP 273
           G R  +   +  
Sbjct: 243 GLRVAFAVAHPE 254

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A* Length = 432

 Score = 95.0 bits (237), Expect = 4e-22
 Identities = 55/263 (20%), Positives = 87/263 (33%), Gaps = 49/263 (18%)

Query: 36  MESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARR 94
              + K     VI LG GD     P   T+A+A+    +      ++ Y    G    R 
Sbjct: 47  SAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAK-KAHELSTIEGYSGYGAEQGAKPLRA 105

Query: 95  AVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAA-----NILLPRPGWPFYE 149
           A+A+         +  DD++++ G           I+RL         I +  P +P Y 
Sbjct: 106 AIAKTFYGG--LGIGDDDVFVSDGAKCD-------ISRLQVMFGSNVTIAVQDPSYPAYV 156

Query: 150 S------------FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN-PCNP 196
                           + +  + +    PE G+  DL  V          I+    P NP
Sbjct: 157 DSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVG------RTDIIFFCSPNNP 210

Query: 197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI--VP-----VI 249
            G   T + L ++ E A+K G +++ D  Y        P        SI  +P      +
Sbjct: 211 TGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPR-------SIFEIPGAEEVAM 263

Query: 250 TLGSISKRWIVPGWRFGWLATND 272
              S S      G R GW     
Sbjct: 264 ETASFSNYAGFTGVRLGWTVIPK 286

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A* Length = 391

 Score = 93.9 bits (233), Expect = 6e-22
 Identities = 38/250 (15%), Positives = 72/250 (28%), Gaps = 34/250 (13%)

Query: 34  SLMESVDKNDPRP--VIPLGHGDPAAFPCFRTAAVAEDAIVDS--VRSSMFN--CYAPMF 87
              +  +KN P    V+ L HGDP A+  +         +        S F+       F
Sbjct: 9   KPEKISNKNIPMSDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWF 68

Query: 88  GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAA---NILLPRPG 144
             P    A+ +              I +  G  +  +  +  ++ L  +   +++   P 
Sbjct: 69  LEPELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPF 128

Query: 145 WPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204
           +  Y                +    ++ + +A      +     ++ +P NP G +    
Sbjct: 129 YSTYVEETT----------YVRSGMYKWEGDA-WGFDKKGPYIELVTSPNNPDGTI---- 173

Query: 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-VITLGSISKRWIVPGW 263
             + +          VI D  Y    +                  I L + SK     G 
Sbjct: 174 -RETVVNRPDDDEAKVIHDFAYYWPHYTPIT--------RRQDHDIMLFTFSKITGHAGS 224

Query: 264 RFGWLATNDP 273
           R GW    D 
Sbjct: 225 RIGWALVKDK 234

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii} Length = 449

 Score = 93.5 bits (233), Expect = 1e-21
 Identities = 52/254 (20%), Positives = 78/254 (30%), Gaps = 52/254 (20%)

Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVR----SSMFNCYAPMFGLPLARRAVAEYL 100
             +I LG GD    P         DA+  +         ++ Y    G    R AVA   
Sbjct: 69  AKIISLGIGDTT-EP---LPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTF 124

Query: 101 NRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAA-----NILLPRPGWPFYES----- 150
                   +AD+I+I+ G           I R+         + +  P +P Y       
Sbjct: 125 YGH--AGRAADEIFISDGSKCD-------IARIQMMFGSKPTVAVQDPSYPVYVDTSVMM 175

Query: 151 -----FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN-PCNPCGNVLTYQ 204
                        + +    P+  +  DL   +         I+    P NP G   T  
Sbjct: 176 GMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAK------RTDIIFFCSPNNPTGAAATRA 229

Query: 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI--VP-----VITLGSISKR 257
            L ++   ARK G +++ D  Y        P  P     +I  +P      I   S SK 
Sbjct: 230 QLTELVNFARKNGSILVYDAAYALYISN--PDCPK----TIYEIPGADEVAIETCSFSKY 283

Query: 258 WIVPGWRFGWLATN 271
               G R GW    
Sbjct: 284 AGFTGVRLGWTVVP 297

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis} Length = 407

 Score = 90.4 bits (225), Expect = 1e-20
 Identities = 51/252 (20%), Positives = 105/252 (41%), Gaps = 18/252 (7%)

Query: 31  AIVSLMESVDKNDPRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFG 88
            ++     + K   + +I L  G  DP   P      +A++ +    +S M   Y P  G
Sbjct: 21  DVMKKASELQKKGVK-LISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM---YTPANG 76

Query: 89  LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY 148
           +P  R  +A +L +    ++S ++I IT+G   A++++  V+   G   ++   P +   
Sbjct: 77  IPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDV-VITENPSYINT 135

Query: 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAI-------VIINPCNPCGNVL 201
               ++   ++    +  + G  + ++ +E    E  A          I    NP G  +
Sbjct: 136 LLAFEQLGAKIEGVPVDND-G--MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTM 192

Query: 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP 261
           + +  + + E A K  +L+I D  Y  + +     +P+    +   VI  G++SK  +  
Sbjct: 193 SMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKV-LGT 251

Query: 262 GWRFGWLATNDP 273
           G+R GW+     
Sbjct: 252 GFRIGWIIAEGE 263

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1 Length = 425

 Score = 90.0 bits (224), Expect = 2e-20
 Identities = 53/255 (20%), Positives = 99/255 (38%), Gaps = 22/255 (8%)

Query: 31  AIVSLMESVDKNDPRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFG 88
            I  +++     D    I  G G  DP  FP    A +A++ I      ++   Y+   G
Sbjct: 32  IIREILKFAADKD---AISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQ--YSTTEG 86

Query: 89  LPLARRAVAEYLNRDL-PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPF 147
            P+ ++ + + L R      L  D++  T+G  +A+++I  +     +   +L  P +  
Sbjct: 87  DPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESY-CVLDDPAYLG 145

Query: 148 YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP---------CNPCG 198
             +  ++         L  + G  +DL  +E    E      I             NP G
Sbjct: 146 AINAFRQYLANFVVVPLEDD-G--MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAG 202

Query: 199 NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW 258
              + +  + + E A K  + ++ D+ YG L +      P+   G    V+ L + SK  
Sbjct: 203 VTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSK-V 261

Query: 259 IVPGWRFGWLATNDP 273
           + PG R G +A +  
Sbjct: 262 LAPGLRIGMVAGSKE 276

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A* Length = 448

 Score = 88.5 bits (220), Expect = 7e-20
 Identities = 53/252 (21%), Positives = 99/252 (39%), Gaps = 20/252 (7%)

Query: 31  AIVSLMESVDKNDPRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFG 88
            +  L++ V+ +D   +I L  G  +P  FP      +  + +      ++   Y    G
Sbjct: 65  EVRELLKLVETSD---IISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQ--YGTTKG 119

Query: 89  LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY 148
               R  + ++L +        +DI IT G  +A+++I  V    G   +++  P +   
Sbjct: 120 FTPLRETLMKWLGKRYG-ISQDNDIMITSGSQQALDLIGRVFLNPGDI-VVVEAPTYLAA 177

Query: 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA-----IVIINPC--NPCGNVL 201
                    +     L  E G  + +E +E    E  +      +V   P   NP G  +
Sbjct: 178 LQAFNFYEPQYIQIPLDDE-G--MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTM 234

Query: 202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP 261
                + + E A +   +V+ D+ YG L +   P   +    +   VI LG+ SK  + P
Sbjct: 235 NEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAP 293

Query: 262 GWRFGWLATNDP 273
           G+R GW+  +  
Sbjct: 294 GFRIGWMVGDPG 305

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A* Length = 364

 Score = 83.3 bits (207), Expect = 3e-18
 Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 12/181 (6%)

Query: 93  RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA 152
            +A+A +        + A  I    G     E I TV + L     ++  PG+  Y    
Sbjct: 65  HQALARHHQ------VPASWILAGNG---ETESIFTVASGLKPRRAMIVTPGFAEYGRAL 115

Query: 153 KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
            ++  E+R + L    GW++    +EAL   +   + +  P NP G +     LQ IA+ 
Sbjct: 116 AQSGCEIRRWSLREADGWQLTDAILEAL-TPDLDCLFLCTPNNPTGLLPERPLLQAIADR 174

Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272
            + L I +I DE +       T +IP         +  L S++K + +PG R G+L  +D
Sbjct: 175 CKSLNINLILDEAFIDFIPHETGFIPA--LKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD 232

Query: 273 P 273
            
Sbjct: 233 D 233

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score = 83.6 bits (207), Expect = 3e-18
 Identities = 41/247 (16%), Positives = 88/247 (35%), Gaps = 22/247 (8%)

Query: 41  KNDPRP-VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEY 99
             + +        G        +  A + DA+ + +       YAP  G+   R    + 
Sbjct: 42  SAEAKSTTYNATIGMAT-NKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQK 100

Query: 100 L---NRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES-FAKRN 155
           +   N +L    +     +T      + ++  +        ILLP   W  Y+  F  RN
Sbjct: 101 MLRDNPELSID-NMSRPIVTNALTHGLSLVGDLFVNQDDT-ILLPEHNWGNYKLVFNTRN 158

Query: 156 HIEVRHFDLLPERGWEVDLEAVEALADENTA--AIVIIN-PCNPCGNVLTYQHLQKIAET 212
              ++ + +  ++      +++            I+I+N P NP G   T++ +  I E 
Sbjct: 159 GANLQTYPIF-DKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEA 217

Query: 213 ARKLG-----ILVIADEVYGHLAFGSTPYIPM-----GVFGSIVPVITLGSISKRWIVPG 262
            + L      ++ + D+ Y  L +       +      +  + +  I L   +K +   G
Sbjct: 218 IKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWG 277

Query: 263 WRFGWLA 269
           +R G++ 
Sbjct: 278 FRVGFMT 284

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} Length = 361

 Score = 78.7 bits (195), Expect = 8e-17
 Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 29/189 (15%)

Query: 93  RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA 152
            +++  Y       KL    I +  G   A EII   I+      IL+  P +  YE  A
Sbjct: 67  NKSIENY------LKLKDIGIVLGNG---ASEIIELSISLFE--KILIIVPSYAEYEINA 115

Query: 153 KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
           K++ + V    L  +    +D E + +  D+  + ++I NP NP G ++  +    + + 
Sbjct: 116 KKHGVSVVFSYL--DENMCIDYEDIISKIDDVDS-VIIGNPNNPNGGLINKEKFIHVLKL 172

Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-------VITLGSISKRWIVPGWRF 265
           A +    +I DE +       +         S V        +  + +++K + +PG RF
Sbjct: 173 AEEKKKTIIIDEAFIEFTGDPSS--------SFVGEIKNYSCLFIIRAMTKFFAMPGIRF 224

Query: 266 GWLATNDPN 274
           G+  TN+  
Sbjct: 225 GYGITNNKE 233

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3 Length = 390

 Score = 77.6 bits (192), Expect = 3e-16
 Identities = 43/201 (21%), Positives = 86/201 (42%), Gaps = 12/201 (5%)

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM 120
           F TA    +A+   +   +F  Y   +       A+A + +      + +  +      +
Sbjct: 40  FATAPCIIEALNQRLMHGVFG-Y-SRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVI 97

Query: 121 EAVEIILTVITRLGAANILLPRPGW-PFYESFAKRNHIEVRHFDLLPERG-WEVDLEAVE 178
             V  ++   +  G   +++  P +  FY++  + N   V    L  +   W  D+  +E
Sbjct: 98  YMVSELIRQWSETGEG-VVIHTPAYDAFYKA-IEGNQRTVMPVALEKQADGWFCDMGKLE 155

Query: 179 A-LADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI 237
           A LA      +++ +P NP G V T   L+ +A+   + G+ VI+DE++  + +G  P+I
Sbjct: 156 AVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHI 215

Query: 238 PMGVFGSIVP--VITLGSISK 256
           P   + ++       L S SK
Sbjct: 216 P---WSNVARGDWALLTSGSK 233

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A* Length = 392

 Score = 76.4 bits (189), Expect = 6e-16
 Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 24/208 (11%)

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLA----RRAVAEYLNRDLPYKLSADDIYIT 116
           F      + AI D            ++G   A     +AV ++   +  Y    +DI   
Sbjct: 43  FEVMPEVKQAIHDYAEQ-------LVYGYTYASDELLQAVLDWEKSEHQYSFDKEDIVFV 95

Query: 117 LGCMEAVEIILTVITRLGAANILLPRPGW-PFYESFAKRNHIEVRHFDLLPERG-WEVDL 174
            G + A+ I +   T+ G A +L+  P + PF  S  + N+ ++    L  E G +++D 
Sbjct: 96  EGVVPAISIAIQAFTKEGEA-VLINSPVYPPFARS-VRLNNRKLVSNSLKEENGLFQIDF 153

Query: 175 EAVEA-LADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
           E +E  + + +    ++ NP NP G V   + L++I    +K  +++++DE++  L    
Sbjct: 154 EQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFG 213

Query: 234 TPYIPMGVFGSIVP-----VITLGSISK 256
             ++    F ++ P      + L S +K
Sbjct: 214 HEHVS---FNTVSPDFKDFALVLSSATK 238

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae} Length = 377

 Score = 76.0 bits (188), Expect = 8e-16
 Identities = 45/224 (20%), Positives = 84/224 (37%), Gaps = 27/224 (12%)

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLA----RRAVAEYLNRDLPYKLSADDIYIT 116
           F T      AI D+V+          FG         +A AE+      Y+   + I+  
Sbjct: 35  FSTCPAVLQAITDAVQ-------REAFGYQPDGSLLSQATAEFYADRYGYQARPEWIFPI 87

Query: 117 LGCMEAVEIILTVITRLGAANILLPRPGW-PFYESFAKRNHIEVRHFDLLPERGWEVDLE 175
              +  + I +   T   +  +++P P + PF+         E    D        ++L 
Sbjct: 88  PDVVRGLYIAIDHFTPAQSK-VIVPTPAYPPFFHL-LSATQREGIFIDA----TGGINLH 141

Query: 176 AVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP 235
            VE        +I++ NP NP G V   + L ++ + A +    V+ DE++  L F    
Sbjct: 142 DVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQ- 200

Query: 236 YIPMGVFGSIVP-----VITLGSISKRWIVPGWRFGWLATNDPN 274
           +        +        IT+ + SK W + G +   +  ++P+
Sbjct: 201 HTV---AAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPS 241

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A* Length = 425

 Score = 76.2 bits (188), Expect = 9e-16
 Identities = 54/270 (20%), Positives = 89/270 (32%), Gaps = 35/270 (12%)

Query: 31  AIVSLMESVDKNDPRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNC---YAP 85
            I ++ + + +     +I L  G  +P  FP        E+         M      Y+P
Sbjct: 18  PIRTMTDILSRGPKS-MISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKRALQYSP 76

Query: 86  MFGLPLARRAVAEYLNR-------DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANI 138
             G+P     + +   +         P      D+ +T G  + +  +  +I   G   +
Sbjct: 77  SAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDN-V 135

Query: 139 LLPRPGWP-----FYESFAKRNHIEVRHFDLLPERGWEVDLEAV-EALADENTAAIVIIN 192
           LL  P +       +       ++      ++P+      L  +      E+        
Sbjct: 136 LLDEPAYSGTLQSLHPLGCNIINVASDESGIVPD-----SLRDILSRWKPEDAKNPQKNT 190

Query: 193 P---------CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243
           P          NP GN LT +  ++I E ARK   L+I D+ Y  L F            
Sbjct: 191 PKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMD 250

Query: 244 SIVPVITLGSISKRWIVPGWRFGWLATNDP 273
               VI   S SK  I  G R G+L    P
Sbjct: 251 VDGRVIRADSFSKI-ISSGLRIGFLTGPKP 279

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} Length = 391

 Score = 76.0 bits (188), Expect = 9e-16
 Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 24/208 (11%)

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLA----RRAVAEYLNRDLPYKLSADDIYIT 116
           F+ A     ++ + ++          FG         +AVA++   +   +   D     
Sbjct: 39  FKIAPEIMASMEEKLKV-------AAFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFA 91

Query: 117 LGCMEAVEIILTVITRLGAANILLPRPGW-PFYESFAKRNHIEVRHFDLLPERG-WEVDL 174
            G + A+  ++   T  G   IL+  P +  FY    + N   V   DL+ E   + V+ 
Sbjct: 92  SGVVPAISAMVRQFTSPGDQ-ILVQEPVYNMFYSV-IEGNGRRVISSDLIYENSKYSVNW 149

Query: 175 EAVEA-LADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
             +E  LA  +   +V  NP NP G   + + +++IAE   K  +L+I+DE++G L    
Sbjct: 150 ADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTD 209

Query: 234 TPYIPMGVFGSIVP-----VITLGSISK 256
               P     ++       V++L S SK
Sbjct: 210 EDITP---AFTVDWDAKNWVVSLISPSK 234

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A* Length = 399

 Score = 75.6 bits (187), Expect = 1e-15
 Identities = 43/208 (20%), Positives = 85/208 (40%), Gaps = 24/208 (11%)

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLA----RRAVAEYLNRDLPYKLSADDIYIT 116
           F+      + +   +          + G        ++ V +++     + +  D I  T
Sbjct: 43  FKNPPELIEGLKKYLDE-------TVLGYTGPTEEYKKTVKKWMKDRHQWDIQTDWIINT 95

Query: 117 LGCMEAVEIILTVITRLGAANILLPRPGW-PFYESFAKRNHIEVRHFDLLPERG-WEVDL 174
            G + AV   +   T+ G   +++  P + PF+ +  K    ++   +LL + G + +D 
Sbjct: 96  AGVVPAVFNAVREFTKPGDG-VIIITPVYYPFFMA-IKNQERKIIECELLEKDGYYTIDF 153

Query: 175 EAVEA-LADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
           + +E    D+N  A++  +P NP G V     LQKI +   K  +++ +DE++  L    
Sbjct: 154 QKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPG 213

Query: 234 TPYIPMGVFGSIVP-----VITLGSISK 256
             +     F SI        IT  + SK
Sbjct: 214 YEHTV---FQSIDEQLADKTITFTAPSK 238

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae} Length = 422

 Score = 75.5 bits (186), Expect = 2e-15
 Identities = 44/256 (17%), Positives = 69/256 (26%), Gaps = 42/256 (16%)

Query: 47  VIPLGHG--DPAAFPCFRTA-AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD 103
            + L  G              ++              N Y  + G+   R   AE L   
Sbjct: 34  SLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRN-YGGLLGIADIRELWAEALG-- 90

Query: 104 LPYKLSADDIYITLGCMEAVEIILTVITRLGAAN-------------ILLPRPGWPFYES 150
               L AD +    G    +   L   +     N              L P PG  +   
Sbjct: 91  ----LPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPG--YDRH 144

Query: 151 FAKRNHIEVRHFDLLP--ERGWEVDLEAVEALADENTAAIVIINPC--NPCGNVLTYQHL 206
           F    H        +P  + G   D+  V  L  +     +   P   NP G   + Q  
Sbjct: 145 FTITEHFGFE-MINVPMTDEG--PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTC 201

Query: 207 QKIAETARK-LGILVIADEVYGHLAFGSTPYIPMGVFGSIVP------VITLGSISKRWI 259
           +++AE +       ++ D  Y          I   V               + S SK  I
Sbjct: 202 RELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSK--I 259

Query: 260 V-PGWRFGWLATNDPN 274
              G    + A++  N
Sbjct: 260 THAGSGVSFFASSKEN 275

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans} Length = 421

 Score = 75.3 bits (186), Expect = 2e-15
 Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 24/208 (11%)

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLA----RRAVAEYLNRDLPYKLSADDIYIT 116
           F      ++AI++  R         +FG         +AV ++  ++  Y +  +DI   
Sbjct: 73  FLPVPEIKEAIINYGRE-------HIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFI 125

Query: 117 LGCMEAVEIILTVITRLGAANILLPRPGW-PFYESFAKRNHIEVRHFDLLPERG-WEVDL 174
            G + A+ I L   +  G   +L+  P + PF  +  + N   +    L    G +E+D 
Sbjct: 126 DGVVPAISIALQAFSEKGD-AVLINSPVYYPFART-IRLNDHRLVENSLQIINGRFEIDF 183

Query: 175 EAVEA-LADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
           E +E  + D N    ++ +P NP G V     L KIAE  +K G+++++DE++  LA   
Sbjct: 184 EQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFG 243

Query: 234 TPYIPMGVFGSIVP-----VITLGSISK 256
             +       ++        I L S +K
Sbjct: 244 NTHHS---LNTLDASYKDFTIILSSATK 268

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300} Length = 423

 Score = 73.2 bits (180), Expect = 1e-14
 Identities = 43/242 (17%), Positives = 77/242 (31%), Gaps = 28/242 (11%)

Query: 54  DPAAFPCFRTA-AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY------ 106
             A F        V     V      + N    + GLP AR   A YL+           
Sbjct: 36  ADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLDVKAENVLVWNN 95

Query: 107 -KLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWP-FYESFAKRNHIEVRHFDL 164
             L    + +T   +  V              +++  PG+   +         E+   D+
Sbjct: 96  SSLELQGLVLTFALLHGVRGSTGPWLSQTPK-MIVTVPGYDRHFLLLQTLG-FELLTVDM 153

Query: 165 LPERGWEVDLEAVEALADENTAA---IVIINPCNPCGNVLTYQHLQKIAE-TARKLGILV 220
             +     D++AVE LA  + +    + +    NP G  ++ +  +++A   A      +
Sbjct: 154 QSDG---PDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTI 210

Query: 221 IADEVYGHLAFGSTPYIPMGVFGSIVP-------VITLGSISKRWIV-PGWRFGWLATND 272
            AD+ Y               F  +              S SK  I   G   G++A+++
Sbjct: 211 FADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSK--ITFAGAGLGFVASSE 268

Query: 273 PN 274
            N
Sbjct: 269 DN 270

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis} Length = 350

 Score = 72.2 bits (178), Expect = 1e-14
 Identities = 30/179 (16%), Positives = 60/179 (33%), Gaps = 22/179 (12%)

Query: 93  RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA 152
           R+ +A+         +  + I +T G          +      +  L+  P +  YE   
Sbjct: 56  RQMLAKR------NSVDNNAILVTNG---PTAAFYQIAQAFRGSRSLIAIPSFAEYEDAC 106

Query: 153 KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
           +    EV  +            E +      N     + NP NP G +L    + ++   
Sbjct: 107 RMYEHEVCFYPSN---------EDIGEADFSNMDFCWLCNPNNPDGRLLQRTEILRLLND 157

Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN 271
                   + D+ Y  ++F +   I          ++ + S S  + +PG R G++  N
Sbjct: 158 HP--DTTFVLDQSY--VSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVAN 212

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A* Length = 356

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 11/153 (7%)

Query: 74  SVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL 133
            +     N Y P           A+Y        +  + + ++ G  E +E+++      
Sbjct: 46  QLTQQTLNRY-PECQPKAVIENYAQYAG------VKPEQVLVSRGADEGIELLIRAFCEP 98

Query: 134 GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP 193
           G   IL   P +  Y   A+   +E R    L    W++DL+ +     +    + + +P
Sbjct: 99  GKDAILYCPPTYGMYSVSAETIGVECRTVPTLD--NWQLDLQGISD-KLDGVKVVYVCSP 155

Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVY 226
            NP G ++  Q  + + E  R   I+V  DE Y
Sbjct: 156 NNPTGQLINPQDFRTLLELTRGKAIVVA-DEAY 187

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A* Length = 391

 Score = 71.0 bits (175), Expect = 5e-14
 Identities = 42/208 (20%), Positives = 87/208 (41%), Gaps = 25/208 (12%)

Query: 61  FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLA----RRAVAEYLNRDLPYKLSADDIYIT 116
           F+ A    D++ + +          ++G          ++  +L R   +K+ ++ +  +
Sbjct: 44  FKAAPCIIDSLKNRLEQ-------EIYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYS 96

Query: 117 LGCMEAVEIILTVITRLGAANILLPRPGW-PFYESFAKRNHIEVRHFDLLPERG--WEVD 173
            G + A+ +++  +T+     I++  P + PF     K N+ E+    L       + +D
Sbjct: 97  PGVIPAISLLINELTKANDK-IMIQEPVYSPFNSV-VKNNNRELIISPLQKLENGNYIMD 154

Query: 174 LEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
            E +E    +    I + NP NP G V T   L+K+ +   K  + +I+DE++  +    
Sbjct: 155 YEDIENKIKDVKLFI-LCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKK 213

Query: 234 TPYIPMGVFGSIVP-----VITLGSISK 256
             +IP     SI        IT  + +K
Sbjct: 214 HKHIP---MASISKEFEKNTITCMAPTK 238

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum} Length = 427

 Score = 69.0 bits (169), Expect = 3e-13
 Identities = 41/271 (15%), Positives = 77/271 (28%), Gaps = 42/271 (15%)

Query: 31  AIVSLMESVDKNDPRPVIPLGHG--DPAAFPCFR--TAAVAEDAIVDSVRSSMFNCYAPM 86
                 E   KN     + L  G              A   +     +  + + N Y  +
Sbjct: 22  IKRKFDELKSKNL---KLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRN-YGGL 77

Query: 87  FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAAN--------- 137
            G+   R+  A+ L          + +         +   +   + +   N         
Sbjct: 78  DGIVDIRQIWADLLGVP------VEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKE 131

Query: 138 ----ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP 193
                + P PG+  + S  +R   E+    +  + G   D++AVE L        + + P
Sbjct: 132 ETVKWICPVPGYDRHFSITERFGFEMISVPMNED-G--PDMDAVEELVKNPQVKGMWVVP 188

Query: 194 --CNPCGNVLTYQHLQKIAETARK-LGILVIADEVYGHLAFGSTPYIPMGVFGSIVP--- 247
              NP G  +T    ++++          V+ D  Y            + + G       
Sbjct: 189 VFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGN 248

Query: 248 ---VITLGSISKRWIV-PGWRFGWLATNDPN 274
                   S SK  I   G    +  T+  N
Sbjct: 249 PNRFWAFTSTSK--ITLAGAGVSFFLTSAEN 277

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} Length = 367

 Score = 68.0 bits (167), Expect = 4e-13
 Identities = 35/175 (20%), Positives = 64/175 (36%), Gaps = 14/175 (8%)

Query: 67  AEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEII 126
               +   +     N Y       L R  + E +        +  ++ +  G  E + ++
Sbjct: 48  LRSELAARLGEVALNRYPVPSSEAL-RAKLKEVMQVP-----AGMEVLLGNGSDEIISML 101

Query: 127 LTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV-EALADENT 185
                R GA  ++ P PG+  Y   A+   +E     L     + +D  A+  A+A+   
Sbjct: 102 ALAAARPGA-KVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQP 158

Query: 186 AAIVIINPCNPCGNVLTYQHLQKIAETA--RKLGILVIADEVYGHLAFGSTPYIP 238
           A + +  P NP GN+     ++ I   A       LV+ DE Y    F    ++ 
Sbjct: 159 AIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQP--FAQESWMS 211

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A Length = 369

 Score = 66.8 bits (164), Expect = 1e-12
 Identities = 40/206 (19%), Positives = 84/206 (40%), Gaps = 12/206 (5%)

Query: 67  AEDAIVDSVR--SSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE 124
               +V +V   ++  N Y     + L R  +A Y+ +     ++ D+++   G  E ++
Sbjct: 48  LVADLVATVDKIATELNRYPERDAVEL-RDELAAYITKQTGVAVTRDNLWAANGSNEILQ 106

Query: 125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV-EALADE 183
            +L      G    L  +P +  +   AK  H E        +  + +D++   E +  +
Sbjct: 107 QLLQAFGGPGR-TALGFQPSYSMHPILAKGTHTEFIAVSRGAD--FRIDMDVALEEIRAK 163

Query: 184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243
               + +  P NP G+V +   +++I   A   GI+++ DE Y    F  +P     +  
Sbjct: 164 QPDIVFVTTPNNPTGDVTSLDDVERIINVAP--GIVIV-DEAYAE--FSPSPSATTLLEK 218

Query: 244 SIVPVITLGSISKRWIVPGWRFGWLA 269
               ++   ++SK +   G R G+  
Sbjct: 219 YPTKLVVSRTMSKAFDFAGGRLGYFV 244

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} Length = 363

 Score = 62.6 bits (153), Expect = 3e-11
 Identities = 47/201 (23%), Positives = 77/201 (38%), Gaps = 14/201 (6%)

Query: 67  AEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEII 126
                 +S  S     Y   +   L R+ VA++        L  +++  T G  E +E++
Sbjct: 50  VAAIQANS--SVETEIYPDGWASSL-RKEVADFYQ------LEEEELIFTAGVDELIELL 100

Query: 127 LTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTA 186
             V+      N ++  P +  Y   A     EVR   L   +  E DLE +    DE T 
Sbjct: 101 TRVLLDTTT-NTVMATPTFVQYRQNALIEGAEVREIPL--LQDGEHDLEGMLNAIDEKTT 157

Query: 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246
            + I NP NP GN +    +Q   +      +LV+ DE Y        P     +  +  
Sbjct: 158 IVWICNPNNPTGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYV-TPQPEKHEKLVRTYK 215

Query: 247 PVITLGSISKRWIVPGWRFGW 267
            +I   + SK + +   R G+
Sbjct: 216 NLIITRTFSKIYGLASARVGY 236

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica} Length = 354

 Score = 59.1 bits (144), Expect = 4e-10
 Identities = 39/177 (22%), Positives = 66/177 (37%), Gaps = 17/177 (9%)

Query: 67  AEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEII 126
           A+ A  D+V     N YA    L L    +A +        + A  I +T G  E +   
Sbjct: 34  AQAAARDAVVK--ANRYAKNEILML-GNKLAAHHQ------VEAPSILLTAGSSEGIRAA 84

Query: 127 LTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTA 186
           +     L A  +++P   +   E FAK   ++V    +L    W  D+E ++A     + 
Sbjct: 85  IEAYASLEA-QLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSG 141

Query: 187 AIVII--NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV 241
             ++   NP NP G +     ++    +      + I DE Y    F + P      
Sbjct: 142 PSIVYLVNPNNPTGTITPADVIEPWIASKPA-NTMFIVDEAYAE--FVNDPRFRSIS 195

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei} Length = 337

 Score = 58.3 bits (142), Expect = 6e-10
 Identities = 37/202 (18%), Positives = 67/202 (33%), Gaps = 25/202 (12%)

Query: 67  AEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEII 126
            + AI  +      N Y       +  R +AE+      +    D++ +  G     E  
Sbjct: 34  VQAAIAAAAAR--INRYPFDAEPRV-MRKLAEH------FSCPEDNLMLVRG---IDECF 81

Query: 127 LTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTA 186
             +     +   +   PG+  Y +    + +      L       +D             
Sbjct: 82  DRISAEFSSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPND--LAQVSRDD 137

Query: 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV 246
            +V+ NP NP G  L+   L ++ +   + G L+I DE Y    + S     +       
Sbjct: 138 CVVLANPSNPTGQALSAGELDQLRQ---RAGKLLI-DETYVD--YSSFRARGLAYGE--- 188

Query: 247 PVITLGSISKRWIVPGWRFGWL 268
             +   S SK + + G R G L
Sbjct: 189 NELVFRSFSKSYGLAGLRLGAL 210

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A* Length = 335

 Score = 57.9 bits (141), Expect = 8e-10
 Identities = 36/172 (20%), Positives = 60/172 (34%), Gaps = 22/172 (12%)

Query: 67  AEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEII 126
             D +   + S     Y       L    +  YL+ D    LS +++ +  G  E    I
Sbjct: 37  LVDEVFRRLNSDALRIYYDSPDEEL-IEKILSYLDTD---FLSKNNVSVGNGADE----I 88

Query: 127 LTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTA 186
           + V+  +     +   P +  Y  FAK    +     L        DL  +  +      
Sbjct: 89  IYVMMLMFD-RSVFFPPTYSCYRIFAKAVGAKFLEVPLTK------DLR-IPEVNVGEGD 140

Query: 187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP 238
            + I NP NP G+V   + +++I +T       V  DE Y    F    Y+ 
Sbjct: 141 VVFIPNPNNPTGHVFEREEIERILKTG----AFVALDEAYYE--FHGESYVD 186

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp} Length = 365

 Score = 54.1 bits (131), Expect = 2e-08
 Identities = 35/205 (17%), Positives = 71/205 (34%), Gaps = 18/205 (8%)

Query: 67  AEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEII 126
           A + +  +  ++  + Y     + L +  +A+       YK+  ++I I  G  + +E  
Sbjct: 48  AIECLRQN--ANKAHLYPDDSMIEL-KSTLAQK------YKVQNENIIIGAGSDQVIEFA 98

Query: 127 LTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEV-DLEAVEALADENT 185
           +           L     +  YE +AK+   +             + + + +     +  
Sbjct: 99  IHSKLNSKN-AFLQAGVTFAMYEIYAKQCGAKCYK---TQSITHNLDEFKKLYETHKDEI 154

Query: 186 AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP---YIPMGVF 242
             I +  P NP G  L      +  +   +   LV+ D  Y   A          P  + 
Sbjct: 155 KLIFLCLPNNPLGECLDASEATEFIKGVNE-DCLVVIDAAYNEFASFKDSKKHLEPCELI 213

Query: 243 GSIVPVITLGSISKRWIVPGWRFGW 267
                V+ LG+ SK + + G R G+
Sbjct: 214 KEFDNVLYLGTFSKLYGLGGLRIGY 238

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} Length = 405

 Score = 53.4 bits (129), Expect = 3e-08
 Identities = 32/219 (14%), Positives = 67/219 (30%), Gaps = 28/219 (12%)

Query: 31  AIVSLMESVDKNDPRPV-IPLG-------HGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC 82
            I+       K D     I L         GD   F     A   +  + ++ +      
Sbjct: 15  NILKTAREF-KEDTCEEKINLSIGVCCNDDGDLHIFDSVLNA---DKLVTENYKE---KP 67

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI--TLGCMEAVEIILTVITRLGAANILL 140
           Y    G           +  +    +    I     +G   A+ ++L  +  L    + +
Sbjct: 68  YLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNVETLYV 127

Query: 141 PRPGWPFYESFAKRNHIEV---RHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC-- 194
             P +  + +  +     +     FD       +++ +  +  L +    + VI+     
Sbjct: 128 TNPPYINHVNMIESRGFNLKYINFFD--YNLI-DINYDLFLNDLRNIPNGSSVILQISCY 184

Query: 195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
           NPC   +  ++  +I E       ++I D  Y    FG 
Sbjct: 185 NPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAY--QGFGH 221

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus} Length = 412

 Score = 51.8 bits (125), Expect = 1e-07
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 13/78 (16%)

Query: 165 LPERGWEV-----DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGIL 219
           L   G  V     + EAV       T A+ +    NP   V     L+ +A  A + G+ 
Sbjct: 116 LSLMGVTVRYVDPEPEAVREALSAKTRAVFVETVANPALLVP---DLEALATLAEEAGVA 172

Query: 220 VIADEVYGHLAFGSTPYI 237
           ++ D       FG+   +
Sbjct: 173 LVVDN-----TFGAAGAL 185

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15} Length = 360

 Score = 51.4 bits (124), Expect = 1e-07
 Identities = 26/134 (19%), Positives = 40/134 (29%), Gaps = 16/134 (11%)

Query: 93  RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA 152
           R    E              I +  G  E +  ++      G   I    P + +Y + A
Sbjct: 71  REVAGELYG------FDPSWIIMANGSDEVLNNLIRAFAAEGE-EIGYVHPSYSYYGTLA 123

Query: 153 KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
           +     VR F L        D                +  P  P G       L+ I E 
Sbjct: 124 EVQGARVRTFGL------TGDFRIAGFPERYEGKVFFLTTPNAPLGPSFP---LEYIDEL 174

Query: 213 ARKLGILVIADEVY 226
           AR+   +++ DE Y
Sbjct: 175 ARRCAGMLVLDETY 188

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula} Length = 418

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 36/221 (16%), Positives = 61/221 (27%), Gaps = 37/221 (16%)

Query: 31  AIVSLMESVD---KNDPRP-VIPLG-------HGDPAAFPCFRTAAVAEDAIVDSVRSSM 79
            I           K + R  V+           G+       +       ++ DS     
Sbjct: 20  VIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEE---YLSLSDSEHVG- 75

Query: 80  FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI----TLGCMEAVEIILTVITRLGA 135
              YAP+ G+P    A  +       +     + +I    T G    +  ++   T  G 
Sbjct: 76  ---YAPIAGIPDFLCAAEK-----ECFGNFRPEGHIRSIATAGGTGGIHHLIHNYTEPGD 127

Query: 136 ANILLPRPGWPFYESFAKRNHIEVRHFDLLPE--RGWEVDLEA-VEALADENTAAIVIIN 192
             +L     W  Y          +  + L  E         +  V  LA + T  +VI N
Sbjct: 128 E-VLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFN 186

Query: 193 PC--NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF 231
               NP G  +  +    I    + L     A      +  
Sbjct: 187 TPGNNPTGYSIEDKDWDSILNFLKDLV----AIGRNNVIIG 223

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A* Length = 420

 Score = 49.1 bits (118), Expect = 7e-07
 Identities = 46/220 (20%), Positives = 79/220 (35%), Gaps = 29/220 (13%)

Query: 31  AIVSLMESVDKNDPRPV-IPLG-------HGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC 82
            I+ L E+    D RP  + LG        G        R A   E A V++        
Sbjct: 35  PILGLNEAF-NADTRPTKVNLGVGVYTNEDGKIPLLRAVRDA---EKARVEAGLP---RG 87

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI--TLGCMEAVEIILTVITR-LGAANIL 139
           Y P+ G+     +V + L  D    ++A  +     LG   A++I    +      A + 
Sbjct: 88  YLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVA 147

Query: 140 LPRPGWPFYESFAKRNHIEV---RHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC- 194
           +  P W  + +       EV    ++D   +    V+ +  + AL       IV+++ C 
Sbjct: 148 ISDPSWENHRALFDMAGFEVVAYPYYD--AKTN-GVNFDGMLAALNGYEPGTIVVLHACC 204

Query: 195 -NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
            NP G  L      ++ E  +   ++   D  Y    FG 
Sbjct: 205 HNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAY--QGFGE 242

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ... Length = 396

 Score = 49.1 bits (118), Expect = 8e-07
 Identities = 44/220 (20%), Positives = 82/220 (37%), Gaps = 29/220 (13%)

Query: 31  AIVSLMESVDKNDPRPV-IPLG-------HGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC 82
            I+ L +   + D RP  I LG        G        + A   E  ++++  +     
Sbjct: 12  PILGLADLF-RADERPGKINLGIGVYKDETGKTPVLTSVKKA---EQYLLENETT---KN 64

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI--TLGCMEAVEIILTVITR-LGAANIL 139
           Y  + G+P   R   E L       ++        T G   A+ +    + +      + 
Sbjct: 65  YLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVW 124

Query: 140 LPRPGWPFYESFAKRNHIEV---RHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC- 194
           +  P WP ++S      +EV    ++D   E    +D +A + +L +     +V+ + C 
Sbjct: 125 VSNPSWPNHKSVFNSAGLEVREYAYYD--AENH-TLDFDALINSLNEAQAGDVVLFHGCC 181

Query: 195 -NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
            NP G   T +  Q +A+ + + G L + D  Y    F  
Sbjct: 182 HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAY--QGFAR 219

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} PDB: 3tat_A* Length = 397

 Score = 48.7 bits (117), Expect = 1e-06
 Identities = 48/220 (21%), Positives = 75/220 (34%), Gaps = 28/220 (12%)

Query: 31  AIVSLMESVDKNDPRPV-IPLG-------HGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC 82
            I++LME   K DPR   + L         G          A   E  +      +    
Sbjct: 12  PILTLMERF-KEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEA---EARLNAQPHGAS--L 65

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI--TLGCMEAVEIILTVITR-LGAANIL 139
           Y PM GL   R A+A  L       L    +    TLG   A+++    + R    + + 
Sbjct: 66  YLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVW 125

Query: 140 LPRPGWPFYESFAKRNHIEV---RHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC- 194
           +  P W  + +       EV     +D        V     +  L      +IV+++PC 
Sbjct: 126 VSDPTWENHVAIFAGAGFEVSTYPWYD--EATN-GVRFNDLLATLKTLQAGSIVLLHPCC 182

Query: 195 -NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
            NP G  LT      + E  +   ++   D  Y    FG+
Sbjct: 183 HNPTGADLTNDQWDAVIEILKARELIPFLDIAY--QGFGA 220

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A* Length = 401

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 44/228 (19%), Positives = 83/228 (36%), Gaps = 44/228 (19%)

Query: 31  AIVSLMESVDKNDPRPV-IPLG-------HGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC 82
            I+ + E+  K D     + LG       +G P    C R A   E  I           
Sbjct: 14  PILGVTEAF-KRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKA---EAMIAAKKMD---KE 66

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI---------TLGCMEAVEIILTVITRL 133
           Y P+ GL    RA AE         L  +              +    ++ +    + R 
Sbjct: 67  YLPIAGLADFTRASAELA-------LGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRF 119

Query: 134 --GAANILLPRPGWPFYESFAKRNHIEV---RHFDLLPERGWEVDLEA-VEALADENTAA 187
              + ++ LP+P W  +    +   +++   R++D  P+    +D    +E ++     +
Sbjct: 120 FKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYD--PKTC-SLDFTGAMEDISKIPEKS 176

Query: 188 IVIINPC--NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
           I++++ C  NP G     +  +++A   +K  +L   D  Y    F S
Sbjct: 177 IILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAY--QGFAS 222

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia} Length = 448

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 39/224 (17%), Positives = 69/224 (30%), Gaps = 30/224 (13%)

Query: 31  AIVSLMESVDKNDPRPV-IPLG-------HGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC 82
           AI++L       D  P  + LG        G P   P  + A   E  I     S     
Sbjct: 35  AILNLTVLY-NADTNPKKVNLGVGAYRDESGKPWILPAVKEA---EAIISSD-LSKYNKE 89

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI--TLGCMEAVEIILTVITR-LGAANIL 139
           Y P+ G PL   A    +            I    +L    ++ I    +   +  A   
Sbjct: 90  YPPVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFY 149

Query: 140 LPRPGWP----FYESFAKRNHIEV---RHFDLLPERGWEVDLEA-VEALADENTAAIVII 191
           +P   WP     Y+    +  +      +     +   E+D     + +      +I + 
Sbjct: 150 MPSTTWPNHYGIYDKVFNKLKVPYKEYTYLR--KDGELEIDFSNTKKDIQSAPEKSIFLF 207

Query: 192 NPC--NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
           + C  NP G   T    +++    ++   +   D  Y    F +
Sbjct: 208 HACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAY--QGFAT 249

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes} Length = 430

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 15/79 (18%)

Query: 165 LPERGWEV------DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGI 218
           LP  G EV      D  AVE   DE T  + +    NP   V     L+ +++     GI
Sbjct: 142 LPSFGIEVRFVDVMDSLAVEHACDETTKLLFLETISNPQLQVA---DLEALSKVVHAKGI 198

Query: 219 LVIADEVYGHLAFGSTPYI 237
            ++ D           PY+
Sbjct: 199 PLVVDTTMT------PPYL 211

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1 Length = 412

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 40/220 (18%), Positives = 78/220 (35%), Gaps = 28/220 (12%)

Query: 31  AIVSLMESVDKNDPRPV-IPLG-------HGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC 82
           A+  + +     D R   + LG       +G P   P  + A   E  I +   SS  + 
Sbjct: 15  ALFGIKQRY-GQDQRATKVDLGIGAYRDDNGKPWVLPSVKAA---EKLIHND--SSYNHE 68

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI--TLGCMEAVEIILTVITR-LGAANIL 139
           Y  + GLP      A+ +       L  D +    +L    A+ I     ++      + 
Sbjct: 69  YLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVY 128

Query: 140 LPRPGWPFYESFAKRNHIEV---RHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC- 194
           L +P W  + +  +   ++     ++    E    +DL   + A+      +I +++ C 
Sbjct: 129 LSKPTWANHMAIFENQGLKTATYPYWA--NETK-SLDLNGFLNAIQKAPEGSIFVLHSCA 185

Query: 195 -NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
            NP G   T +   +I +       + + D  Y    F +
Sbjct: 186 HNPTGLDPTSEQWVQIVDAIASKNHIALFDTAY--QGFAT 223

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A* Length = 394

 Score = 46.4 bits (111), Expect = 5e-06
 Identities = 54/220 (24%), Positives = 83/220 (37%), Gaps = 32/220 (14%)

Query: 31  AIVSLMESVDKNDPRPV-IPLG-------HGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC 82
            I++LM    + DPR   I LG        G          A   E  ++++  +     
Sbjct: 12  KILALMGEF-RADPRQGKIDLGVGVYKDATGHTPIMRAVHAA---EQRMLETETT---KT 64

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI--TLGCMEAVEIILTVITR-LGAANIL 139
           YA + G P  ++A+ E +   L   L ++      T+G   A+   L +         + 
Sbjct: 65  YAGLSGEPEFQKAMGELI---LGDGLKSETTATLATVGGTGALRQALELARMANPDLRVF 121

Query: 140 LPRPGWPFYESFAKRNHIEV---RHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC- 194
           +  P WP + S      + V   R+FD   E    VD E     LA      +V+++ C 
Sbjct: 122 VSDPTWPNHVSIMNFMGLPVQTYRYFD--AETR-GVDFEGMKADLAAAKKGDMVLLHGCC 178

Query: 195 -NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
            NP G  LT     +IA    K G L + D  Y    FG 
Sbjct: 179 HNPTGANLTLDQWAEIASILEKTGALPLIDLAY--QGFGD 216

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A* Length = 371

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 20/164 (12%), Positives = 48/164 (29%), Gaps = 41/164 (25%)

Query: 92  ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAAN--ILLPR------- 142
               + ++L          D   +T G  EA      V+  L   +  +++         
Sbjct: 59  IHNQLPKFLG--------CDVARVTNGAREA---KFAVMHSLAKKDAWVVMDENCHYSSY 107

Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENT-----AAIVIINPCNPC 197
                     +R  + +          + +  E      +E          +I  P    
Sbjct: 108 VAA-------ERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNY 160

Query: 198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV 241
           GN+     ++KIA+   +  + ++ +  Y          +P+ +
Sbjct: 161 GNL---PDVKKIAKVCSEYDVPLLVNGAYA------IGRMPVSL 195

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis} Length = 414

 Score = 45.2 bits (108), Expect = 1e-05
 Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 16/91 (17%)

Query: 147 FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL 206
                  R  ++    D         DL   E      T A+    P NP  +++    +
Sbjct: 136 VCSEILPRWGVQTVFVDG-------DDLSQWERALSVPTQAVFFETPSNPMQSLVD---I 185

Query: 207 QKIAETARKLGILVIADEVYGHLAFGSTPYI 237
             + E A   G  V+ D V+      +TP +
Sbjct: 186 AAVTELAHAAGAKVVLDNVF------ATPLL 210

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei} Length = 409

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 40/221 (18%), Positives = 78/221 (35%), Gaps = 35/221 (15%)

Query: 31  AIVSLMESVDKNDPRPV-IPLG-------HGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC 82
            I+ L +   + DP    + L           P    C + A +  +             
Sbjct: 27  PILGLGQDF-RMDPAKRKVNLSIGVYRDDADQPFVLECVKQATLGTN-----------MD 74

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI--TLGCMEAVEIILTVITRL--GAANI 138
           YAP+ G+        +         L    I    TLG   A+ I   ++ R       I
Sbjct: 75  YAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRI 134

Query: 139 LLPRPGWPFYESFAKRNHIEV---RHFDLLPERGWEVDLEA-VEALADENTAAIVIINPC 194
             P  G+P +ES   +  +E+    ++D  P     ++L   +E L      ++++++ C
Sbjct: 135 YGPDVGYPNHESIFAKAGMELTPYSYYD--PATK-GLNLAGMLECLDKAPEGSVILVHAC 191

Query: 195 --NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
             NP G   T+   +++ +  ++   +   D  Y    F +
Sbjct: 192 AHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAY--QGFAT 230

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus} Length = 375

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 25/81 (30%)

Query: 173 DLEAVEALADENTAAIVI--------INPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224
           D+++V  L DE TA I+I        +N  +          L K+ E  ++  +L+I DE
Sbjct: 161 DIDSVYKLLDEETAGIIIEVIQGEGGVNEASE-------DFLSKLQEICKEKDVLLIIDE 213

Query: 225 V----------YGHLAFGSTP 235
           V          Y +  F   P
Sbjct: 214 VQTGIGRTGEFYAYQHFNLKP 234

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A* Length = 398

 Score = 44.4 bits (106), Expect = 2e-05
 Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 16/91 (17%)

Query: 147 FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL 206
           F      +  I VR  D           E + A     T  + I  P NP  +++    +
Sbjct: 119 FLSHSMPKFGINVRFVDA-------AKPEEIRAAMRPETKVVYIETPANPTLSLVD---I 168

Query: 207 QKIAETARKLGILVIADEVYGHLAFGSTPYI 237
           + +A  A + G L++ D  +       +PY 
Sbjct: 169 ETVAGIAHQQGALLVVDNTF------MSPYC 193

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp} Length = 395

 Score = 44.4 bits (106), Expect = 3e-05
 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 25/81 (30%)

Query: 173 DLEAVEALADENTAAIVI--------INPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224
           D+ +VE L +E T AI++        INP N           + + +   +  IL+IADE
Sbjct: 168 DISSVEKLVNEKTCAIILESVQGEGGINPANK-------DFYKALRKLCDEKDILLIADE 220

Query: 225 V----------YGHLAFGSTP 235
           +          + +      P
Sbjct: 221 IQCGMGRSGKFFAYEHAQILP 241

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A* Length = 374

 Score = 44.1 bits (104), Expect = 3e-05
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 23/130 (17%)

Query: 126 ILTVITRLGAAN--ILLPR-PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD 182
           IL  I  L        LP  PG P  E   K   +  ++F+          +  +    D
Sbjct: 89  ILATILALKPKKVIHYLPELPGHPSIERSCKI--VNAKYFES-------DKVGEILNKID 139

Query: 183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF 242
           ++T  I+  +  +    V+  ++ +K+  TA+    +V  D      A G+     + + 
Sbjct: 140 KDTLVIITGSTMDL--KVIELENFKKVINTAKNKEAIVFVD-----DASGA----RVRLL 188

Query: 243 GSIVPVITLG 252
            +  P + LG
Sbjct: 189 FNQPPALKLG 198

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A* Length = 397

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 12/81 (14%), Positives = 28/81 (34%), Gaps = 25/81 (30%)

Query: 173 DLEAVEALADENTAAIVI--------INPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224
           ++E +     E+  A+ +        I P          + L++  +   +   L++ DE
Sbjct: 172 NVEDLRRKMSEDVCAVFLEPIQGESGIVPATK-------EFLEEARKLCDEYDALLVFDE 224

Query: 225 V----------YGHLAFGSTP 235
           V          + +  +G  P
Sbjct: 225 VQCGMGRTGKLFAYQKYGVVP 245

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A* Length = 395

 Score = 43.7 bits (104), Expect = 4e-05
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 25/81 (30%)

Query: 173 DLEAVEALADENTAAIVI--------INPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224
           D+EA++   DE TAA+++        + P  P       + L+   E  ++ G L+I DE
Sbjct: 174 DVEALKRAVDEETAAVILEPVQGEGGVRPATP-------EFLRAAREITQEKGALLILDE 226

Query: 225 V----------YGHLAFGSTP 235
           +          +    FG  P
Sbjct: 227 IQTGMGRTGKRFAFEHFGIVP 247

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A* Length = 420

 Score = 43.7 bits (104), Expect = 5e-05
 Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 25/81 (30%)

Query: 173 DLEAVEALADENTAAIVI--------INPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224
           DL AV+A+ D++T A+V+        +    P       + L+ + +   +   L++ DE
Sbjct: 190 DLHAVKAVMDDHTCAVVVEPIQGEGGVQAATP-------EFLKGLRDLCDEHQALLVFDE 242

Query: 225 V----------YGHLAFGSTP 235
           V          + ++ +G TP
Sbjct: 243 VQCGMGRTGDLFAYMHYGVTP 263

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3 Length = 421

 Score = 43.3 bits (103), Expect = 5e-05
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 10/66 (15%)

Query: 165 LPERGWEV-------DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG 217
           L   G EV         E   AL DE T A  + +  NP  N+     L+ +A+ AR+ G
Sbjct: 118 LKRLGIEVRFTSREERPEEFLALTDEKTRAWWVESIGNPALNIP---DLEALAQAAREKG 174

Query: 218 ILVIAD 223
           + +I D
Sbjct: 175 VALIVD 180

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A* Length = 398

 Score = 42.9 bits (102), Expect = 7e-05
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 16/91 (17%)

Query: 147 FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL 206
           F         +++RH D+        DL+A+EA     T  I   +P NP  ++     +
Sbjct: 120 FLHHGIGEFGVKLRHVDM-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---I 169

Query: 207 QKIAETARKLGILVIADEVYGHLAFGSTPYI 237
             +A+ ARK G  V+ D  Y       TPY+
Sbjct: 170 AGVAKIARKHGATVVVDNTY------CTPYL 194

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3 Length = 464

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 10/75 (13%)

Query: 149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQK 208
                R+ + V+  +          L+ V A     T  + + +P NP         ++K
Sbjct: 189 SQVVPRSGVVVKRVNT-------TKLDEVAAAIGPQTKLVWLESPTNP---RQQISDIRK 238

Query: 209 IAETARKLGILVIAD 223
           I+E A   G LV+ D
Sbjct: 239 ISEMAHAQGALVLVD 253

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A* Length = 415

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 10/79 (12%), Positives = 23/79 (29%), Gaps = 12/79 (15%)

Query: 147 FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL 206
           F      +  +    FD L           +      NT  + + +P +     +    +
Sbjct: 137 FCSKILSKLGVTTSWFDPL-------IGADIVKHLQPNTKIVFLESPGSI---TMEVHDV 186

Query: 207 QKIAETARKL--GILVIAD 223
             I    R +    +++ D
Sbjct: 187 PAIVAAVRSVVPDAIIMID 205

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A* Length = 389

 Score = 41.3 bits (98), Expect = 2e-04
 Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 16/91 (17%)

Query: 147 FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL 206
            +  +  R  IEV   D         D+E V+A    NT  + + +P NP   V     +
Sbjct: 114 LFTHWLPRFGIEVDLIDT-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---I 163

Query: 207 QKIAETARKLGILVIADEVYGHLAFGSTPYI 237
           + IA    + G  ++ D  +      ++P  
Sbjct: 164 KGIAVVCHERGARLVVDATF------TSPCF 188

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3 Length = 386

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 10/77 (12%)

Query: 147 FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL 206
            ++S AKR    V   D         D +A+ A   E    +++ +P NP   +L    +
Sbjct: 107 LFDSLAKRGCYRVLFVDQ-------GDEQALRAALAEKPKLVLVESPSNP---LLRVVDI 156

Query: 207 QKIAETARKLGILVIAD 223
            KI   AR++G + + D
Sbjct: 157 AKICHLAREVGAVSVVD 173

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} PDB: 3qi6_A* Length = 392

 Score = 40.6 bits (96), Expect = 4e-04
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 10/77 (12%)

Query: 147 FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL 206
             +      ++E     L        DL+AV A     T  I +  P NP   +L+   +
Sbjct: 121 LIDKVFTGWNVEYTPVAL-------ADLDAVRAAIRPTTRLIWVETPTNP---LLSIADI 170

Query: 207 QKIAETARKLGILVIAD 223
             IA+        V+ D
Sbjct: 171 AGIAQLGADSSAKVLVD 187

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A* Length = 412

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 48/234 (20%), Positives = 81/234 (34%), Gaps = 50/234 (21%)

Query: 31  AIVSLMESVDKNDPRPV-IPLG-------HGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC 82
            +  L+    + DP P  + LG          P   P  R     E  I ++  SS+ + 
Sbjct: 16  LVFKLIADF-REDPDPRKVNLGVGAYRTDDCQPWVLPVVRKV---EQRIANN--SSLNHE 69

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI--TLGCMEAVEIILTVITRL------G 134
           Y P+ GL   R   +     D    L    +    +LG   A+ I    + R        
Sbjct: 70  YLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNK 129

Query: 135 AANILLPRPGWPFYESFAKRNHIEV------------RHFDLLPERGWEVDLEA-VEALA 181
              + +  P W         NH  V            R++D   E+   +DL+  +  L 
Sbjct: 130 DTPVYVSSPTWE--------NHNGVFTTAGFKDIRSYRYWD--TEKR-GLDLQGFLSDLE 178

Query: 182 DENTAAIVIINPC--NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS 233
           +    +I +++ C  NP G   T +  ++IA   ++  +    D  Y    F S
Sbjct: 179 NAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAY--QGFAS 230

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A* Length = 445

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 17/92 (18%)

Query: 147 FYESFAKRNHIEVRHFDLLPERGWEVDLEAVE-ALADENTAAIVIINPCNPCGNVLTYQH 205
           F E+   +  I     D         D+ A+E AL  +        +P NP    +    
Sbjct: 169 FIETILPKMGITATVIDP-------ADVGALELALNQKKVNLFFTESPTNPFLRCVD--- 218

Query: 206 LQKIAETARKLGILVIADEVYGHLAFGSTPYI 237
           ++ +++   + G LV  D  +      +TP  
Sbjct: 219 IELVSKLCHEKGALVCIDGTF------ATPLN 244

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi} Length = 472

 Score = 39.9 bits (94), Expect = 8e-04
 Identities = 25/94 (26%), Positives = 32/94 (34%), Gaps = 28/94 (29%)

Query: 173 DLEAVEALADENTAAIVIINPCNPCGNVL----TYQHLQKIAETARKLGILVIADEV--- 225
           +LE       EN  A  I  P    G V+    +Y    +I     K  IL+IADEV   
Sbjct: 211 ELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSY--WPEIQRICDKYDILLIADEVICG 268

Query: 226 -------YGHLAFGSTP------------YIPMG 240
                  +G    G  P            Y P+G
Sbjct: 269 FGRTGNWFGTQTMGIRPHIMTIAKGLSSGYAPIG 302

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida} Length = 449

 Score = 39.5 bits (93), Expect = 9e-04
 Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 28/94 (29%)

Query: 173 DLEAVEALADENTAAIVIINPCNPCGNVL----TYQHLQKIAETARKLGILVIADEV--- 225
           +L  +  L D +  A V + P      VL     Y  L++  E   +  IL++ DEV   
Sbjct: 207 ELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGY--LKRNREICNQHNILLVFDEVITG 264

Query: 226 -------YGHLAFGSTP------------YIPMG 240
                  +G  +FG TP             IPMG
Sbjct: 265 FGRTGSMFGADSFGVTPDLMCIAKQVTNGAIPMG 298

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	311
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	100.0
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	100.0
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	100.0
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	100.0
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	100.0
3ele_A	398	Amino transferase; RER070207001803, structural gen	100.0
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	100.0
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	100.0
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	100.0
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	100.0
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	100.0
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	100.0
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	100.0
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	100.0
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	100.0
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	100.0
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	100.0
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	100.0
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	100.0
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	100.0
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	100.0
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	100.0
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	100.0
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	100.0
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	100.0
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	100.0
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	100.0
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	100.0
3nra_A	407	Aspartate aminotransferase; structural genomics, j	100.0
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	100.0
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	100.0
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	100.0
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	100.0
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	100.0
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	100.0
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	100.0
1vp4_A	425	Aminotransferase, putative; structural genomics, j	100.0
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	100.0
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	100.0
3rq1_A	418	Aminotransferase class I and II; structural genomi	100.0
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	100.0
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	100.0
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	100.0
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	100.0
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	100.0
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	100.0
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	100.0
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	100.0
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	100.0
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	100.0
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	100.0
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	100.0
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	100.0
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	100.0
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	100.0
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	100.0
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	100.0
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	100.0
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	100.0
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	100.0
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	100.0
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	100.0
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	100.0
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	100.0
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	100.0
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	100.0
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	100.0
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	100.0
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	100.0
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	100.0
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	100.0
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	100.0
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	100.0
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	100.0
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	100.0
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	100.0
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	100.0
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	99.98
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	99.97
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	99.97
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	99.96
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.96
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	99.95
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.95
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	99.94
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	99.94
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.94
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.94
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.94
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.94
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	99.94
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.94
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.94
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.94
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	99.94
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.94
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.93
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	99.93
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	99.93
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	99.93
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.93
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.93
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.93
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.93
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.93
1svv_A	359	Threonine aldolase; structural genomics, structura	99.93
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	99.93
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.92
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.92
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.92
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.92
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	99.92
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.92
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	99.92
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.92
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.92
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.92
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	99.92
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.92
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	99.92
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.92
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.91
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.91
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.91
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.91
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.91
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.91
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.91
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.91
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.91
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.91
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.91
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	99.91
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.91
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.91
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.91
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.91
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.9
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.9
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.9
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.9
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.9
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.9
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.9
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.9
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.9
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.9
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.9
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.9
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.9
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.9
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.9
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.9
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.9
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.9
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.89
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.89
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.89
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.89
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.89
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.89
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.89
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.89
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.89
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.89
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.89
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.89
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.89
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.89
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.89
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.89
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.88
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.88
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.88
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.88
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.88
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.88
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.88
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.88
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.88
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.88
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.88
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.88
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.87
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.87
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.87
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.87
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.87
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.87
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.87
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.87
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.87
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.87
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.87
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.86
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.86
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.86
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.86
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.85
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.85
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.85
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.85
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.84
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.84
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.83
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.83
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.83
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.82
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.82
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.81
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.81
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.81
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.8
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.67
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.78
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.77
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.76
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.76
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.76
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.75
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.74
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.73
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.73
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.7
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.68
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.46
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.45
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.45
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.43
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.41
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.4
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.36
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	99.34
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.26
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.17
3gh5_A	525	HEX1, beta-hexosaminidase; beta-N-acetylhexosamini	83.05

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=100.00  E-value=6.1e-42  Score=318.24  Aligned_cols=296  Identities=33%  Similarity=0.670  Sum_probs=241.4

Q ss_pred             ccccccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC
Q 021547            5 AEKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA   84 (311)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~   84 (311)
                      -.+.|+...+...+.   + ...|+.+++.+...  ...++++|+|+.|+|..++.+++++.+.+++.+.+.......|.
T Consensus        20 ~~~~w~~~~~~~~~~---~-~~~i~~~~~~~~~~--~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~   93 (427)
T 3dyd_A           20 FQSMWSVRPSDMAKK---T-FNPIRAIVDNMKVK--PNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYA   93 (427)
T ss_dssp             ----CCCCCCC--------------------CCC--CCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCC
T ss_pred             cccccCcchhhHhhc---c-cchHHHHHHHHhhc--ccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCC
Confidence            356899887765555   4 44699888754221  12457889999999876666889999999999998876666899


Q ss_pred             CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeec
Q 021547           85 PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL  164 (311)
Q Consensus        85 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~  164 (311)
                      +..|..++|+++++++.+. +..+.+++|++|+|+++|+.+++.+++++| |+|+++.|+|.++...++..|.+++.++.
T Consensus        94 ~~~g~~~lr~~la~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~  171 (427)
T 3dyd_A           94 PSIGFLSSREEIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPG-QNILVPRPGFSLYKTLAESMGIEVKLYNL  171 (427)
T ss_dssp             CTTCCHHHHHHHHHHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHCCTT-CEEEEEESCCTHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCcHHHHHHHHHHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEEec
Confidence            8899999999999999875 777888999999999999999999999999 99999999999999999999999999998


Q ss_pred             cCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547          165 LPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS  244 (311)
Q Consensus       165 ~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~  244 (311)
                      .+..++.+|++.+++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|+.+.+++..+.++..+..
T Consensus       172 ~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~  251 (427)
T 3dyd_A          172 LPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLST  251 (427)
T ss_dssp             EGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCS
T ss_pred             ccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCC
Confidence            77678899999999999989999999999999999999999999999999999999999999999998877777777777


Q ss_pred             CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          245 IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       245 ~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +.++|+++|+||.|+++|+|+||++++++...+. +++++.++......+++++++|+++.++|+
T Consensus       252 ~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~-~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~  315 (427)
T 3dyd_A          252 DVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFG-NEIRDGLVKLSQRILGPCTIVQGALKSILC  315 (427)
T ss_dssp             SCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSH-HHHHHHHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred             CCcEEEEeeccccCCCcCcceEEEEecCcchhhH-HHHHHHHHHHHhccCCCCHHHHHHHHHHHH
Confidence            7789999999999999999999999987543331 246677766644356889999999999886

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=100.00  E-value=4.7e-41  Score=307.99  Aligned_cols=270  Identities=23%  Similarity=0.381  Sum_probs=230.0

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR  102 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~  102 (311)
                      -..+.++++.....+...  .++++|+|+.|+|.    ++.++.+.+++.+.+.... .+|++..|..++|+++++++++
T Consensus        11 ~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~   83 (385)
T 1b5p_A           11 MKPSATVAVNAKALELRR--QGVDLVALTAGEPD----FDTPEHVKEAARRALAQGK-TKYAPPAGIPELREALAEKFRR   83 (385)
T ss_dssp             CCCCHHHHHHHHHHHHHH--TTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHH
T ss_pred             cCcchHHHHHHHHHHHHh--cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHH
Confidence            445556666554332221  35789999999864    5567899999988886543 4798888999999999999999


Q ss_pred             cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547          103 DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD  182 (311)
Q Consensus       103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~  182 (311)
                      .+|..+++++|++|+|+++++.+++.+++++| |+|+++.|+|..|...++..|.+++.+++++++++.+|++++++.++
T Consensus        84 ~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~  162 (385)
T 1b5p_A           84 ENGLSVTPEETIVTVGGSQALFNLFQAILDPG-DEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT  162 (385)
T ss_dssp             TTCCCCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCC
T ss_pred             HhCCCCChHHEEEcCChHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcC
Confidence            88988889999999999999999999999999 99999999999999999999999999998654577899999999998


Q ss_pred             CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547          183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG  262 (311)
Q Consensus       183 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G  262 (311)
                      ++++++++++|+||||.+++.+++++|+++|++||++||+||+|+.+.+++ ++.++..++. +++|+++|+||.|+++|
T Consensus       163 ~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~SK~~~~~G  240 (385)
T 1b5p_A          163 PRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLTVNGAAKAFAMTG  240 (385)
T ss_dssp             TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEEEEESTTTTTCGG
T ss_pred             CCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEEEEechhhcCCcc
Confidence            889999999999999999999999999999999999999999999998876 5556666655 78999999999999999


Q ss_pred             ceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          263 WRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       263 ~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +|+||+++++        +++++++.... ...+++.++|.++.++|++
T Consensus       241 ~RiG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  281 (385)
T 1b5p_A          241 WRIGYACGPK--------EVIKAMASVSRQSTTSPDTIAQWATLEALTN  281 (385)
T ss_dssp             GCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHC
T ss_pred             cceEEEEeCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHhC
Confidence            9999999853        47777776643 3467899999999888853

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=100.00  E-value=1.4e-39  Score=300.86  Aligned_cols=292  Identities=28%  Similarity=0.560  Sum_probs=237.9

Q ss_pred             cccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC
Q 021547            8 KWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF   87 (311)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~   87 (311)
                      +|+...|.....    ..+.++.+++.. ...  ..++++|+|+.|+|..++.+++++.+.+++.+.+.......|++..
T Consensus         3 ~~~~~~~~~~~~----~~~~~~~~~~~~-~~~--~~~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~   75 (416)
T 1bw0_A            3 SWDVSMSNHAGL----VFNPIRTVSDNA-KPS--PSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTV   75 (416)
T ss_dssp             -CCCCCCHHHHT----CCCHHHHHHHTC-CCC--CSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTT
T ss_pred             ccccCchhhhhc----cccHHHHHHHHH-HHh--hcCCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCC
Confidence            588888753332    334577766532 111  1246899999999875556889999999999998765556798888


Q ss_pred             CcHHHHHHHHHHHhh------cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEE
Q 021547           88 GLPLARRAVAEYLNR------DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRH  161 (311)
Q Consensus        88 g~~~lr~~ia~~l~~------~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~  161 (311)
                      |..++|+++++++++      ..|+++++++|++|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.
T Consensus        76 ~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~  154 (416)
T 1bw0_A           76 GSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAG-DYALVPQPGFPHYETVCKAYGIGMHF  154 (416)
T ss_dssp             CCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCTHHHHHHHHTTCEEEE
T ss_pred             CCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCC-CEEEEcCCCcHhHHHHHHHcCcEEEE
Confidence            999999999999982      25666788999999999999999999999999 99999999999999999999999999


Q ss_pred             eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC----CCC
Q 021547          162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST----PYI  237 (311)
Q Consensus       162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~----~~~  237 (311)
                      +++.++.++.+|++.|++.++++++++++++|+||||.+++.+++++|+++|++||++||+|++|..+.+++.    .+.
T Consensus       155 v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~  234 (416)
T 1bw0_A          155 YNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFT  234 (416)
T ss_dssp             EEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCC
T ss_pred             eecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCcc
Confidence            9886555678999999999988899999999999999999999999999999999999999999999888775    455


Q ss_pred             cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          238 PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       238 ~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++..++...++++++|+||.|+++|+|+||++++++....  ..+...++......+++++++|+++.++|+
T Consensus       235 ~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  304 (416)
T 1bw0_A          235 SVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNG--PSFLEGLKRVGMLVCGPCTVVQAALGEALL  304 (416)
T ss_dssp             CTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSC--HHHHHHHHHHHHHHTCSCHHHHHHHHHHHH
T ss_pred             CHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhH--HHHHHHHHHHhccccCCCcHHHHHHHHHHh
Confidence            6666665567899999999999999999999997641122  124444444322345789999999998886

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=100.00  E-value=8.9e-40  Score=305.52  Aligned_cols=279  Identities=18%  Similarity=0.260  Sum_probs=237.5

Q ss_pred             cccccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCC
Q 021547            6 EKKWGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCY   83 (311)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y   83 (311)
                      .++|...+|++.+.   ...+.++++++..       ..+++|+|+.|.|..  .+.+++.+.+++.+.+...  ...+|
T Consensus        47 ~~~~~~~~s~~~~~---~~~s~~~~~~~~~-------~~~~~i~l~~g~p~~--~~~p~~~v~~a~~~~l~~~~~~~~~Y  114 (448)
T 3aow_A           47 LGDVERFFSKKALE---MRASEVRELLKLV-------ETSDIISLAGGLPNP--KTFPKEIIRDILVEIMEKYADKALQY  114 (448)
T ss_dssp             TSCGGGGCCHHHHH---CCCCHHHHHHHHH-------HTSSSEECCCCCCCG--GGSCHHHHHHHHHHHHHHSHHHHHSC
T ss_pred             ccchHHHhhHHHhc---CCCcHHHHHHHhc-------cCCCcEeCCCCCCCc--hhCCHHHHHHHHHHHHHhhhHHHhCC
Confidence            46799989988887   7778888887642       146799999998763  3457789999998887643  23479


Q ss_pred             CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEee
Q 021547           84 APMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFD  163 (311)
Q Consensus        84 ~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~  163 (311)
                      .+..|..++|+++++++++.+|.+ ++++|++|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.++
T Consensus       115 ~~~~g~~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~~~G-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~  192 (448)
T 3aow_A          115 GTTKGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPG-DIVVVEAPTYLAALQAFNFYEPQYIQIP  192 (448)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHCCTT-CEEEEEESCCHHHHHHHHTTCCEEEEEE
T ss_pred             CCCCCcHHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHcCCC-CEEEEeCCChHHHHHHHHHcCCEEEEec
Confidence            988899999999999997777876 78999999999999999999999999 9999999999999999999999999998


Q ss_pred             ccCCCCcccCHHHHHhhcC----C--CccEE-EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCC
Q 021547          164 LLPERGWEVDLEAVEALAD----E--NTAAI-VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPY  236 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~----~--~~~~i-~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~  236 (311)
                      .+.+   ++|++.|++.++    +  +++++ ++++|+||||.+++.+++++|+++|++||++||+||+|+.+.|++..+
T Consensus       193 ~~~~---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~  269 (448)
T 3aow_A          193 LDDE---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPE  269 (448)
T ss_dssp             EETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCC
T ss_pred             cCCC---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCC
Confidence            7542   489999999886    5  78887 467899999999999999999999999999999999999999887666


Q ss_pred             CcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          237 IPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       237 ~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      .++..++..+++|++.||||.|+ +|+|+||++++.        ++++++..... ...++|+++|++++++|++
T Consensus       270 ~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~  335 (448)
T 3aow_A          270 KKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDP--------GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDG  335 (448)
T ss_dssp             CCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHT
T ss_pred             cCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCH--------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence            67777766678999999999998 999999999853        47777776543 3467799999999998874

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=100.00  E-value=3.5e-39  Score=297.26  Aligned_cols=277  Identities=13%  Similarity=0.064  Sum_probs=216.2

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHH-hcCCCCCCCCCCCcHHHHHHHHHHH
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSV-RSSMFNCYAPMFGLPLARRAVAEYL  100 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~-~~~~~~~Y~~~~g~~~lr~~ia~~l  100 (311)
                      ...+.++.+...+.    +...+++|||+.|.| +..+.+++++.+.+++. .+ ..+...+|.+..|.++||+++++|+
T Consensus        11 ~~~~~i~~~~~~~~----~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~   85 (405)
T 3k7y_A           11 IEVDNILKTAREFK----EDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLI   85 (405)
T ss_dssp             CCCCHHHHHHHHHT----TSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHh----cCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHH
Confidence            45667777776532    224578999999963 22234567899999887 54 4445668999999999999999999


Q ss_pred             hhcCCCCCCCCC--EEEeCChHHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHH
Q 021547          101 NRDLPYKLSADD--IYITLGCMEAVEIILTVITR-LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV  177 (311)
Q Consensus       101 ~~~~g~~~~~~~--v~~t~g~~~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  177 (311)
                      .+..+..+.+++  +++|.|+++|+.+++.++.. .. |+|++++|+|++|...++..|.+++.+++..++++++|++.+
T Consensus        86 ~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l  164 (405)
T 3k7y_A           86 FGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLF  164 (405)
T ss_dssp             HCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHH
T ss_pred             cCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHH
Confidence            877776667775  59999999999999999976 24 899999999999999999999999999985555789999999


Q ss_pred             HhhcCC--CccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC--CCccccc-CCCCCeEEE
Q 021547          178 EALADE--NTAAIVIINP-CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP--YIPMGVF-GSIVPVITL  251 (311)
Q Consensus       178 ~~~l~~--~~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~--~~~~~~~-~~~~~~i~i  251 (311)
                      ++.+++  +++++++++| |||||.+++.+++++|+++|++||++||+||+|.++.+++..  ..++..+ ...+++|++
T Consensus       165 ~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~  244 (405)
T 3k7y_A          165 LNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVC  244 (405)
T ss_dssp             HHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEE
T ss_pred             HHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEE
Confidence            998763  5677777665 899999999999999999999999999999999999886421  1222222 234589999


Q ss_pred             ecCcccCCCCcceeeEEEeeCCCCccchhhHH----HHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547          252 GSISKRWIVPGWRFGWLATNDPNGVLQKSGIV----GSIKAC-LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       252 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +||||.|+++|+|+||+++....     ++++    +.++.. .....+++.++|.+++.+|++
T Consensus       245 ~S~SK~~~l~GlRiG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~  303 (405)
T 3k7y_A          245 QSFSKNMSLYGERAGALHIVCKN-----QEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNN  303 (405)
T ss_dssp             EECTTTSCCTTTTEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHC
T ss_pred             eeCCccCCCccccceEEEEEeCC-----HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCC
Confidence            99999999999999999764322     1233    334333 233456778999999888764

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=100.00  E-value=9.9e-39  Score=293.37  Aligned_cols=287  Identities=20%  Similarity=0.277  Sum_probs=232.5

Q ss_pred             cchHHhhHHHHh--hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCCCCC
Q 021547           12 EVKQELNREREA--EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM---FNCYAPM   86 (311)
Q Consensus        12 ~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~---~~~Y~~~   86 (311)
                      .++++.+.   -  .++.+++++....+...+.+++++|+|+.|+|.    +++++.+.+++.+.+....   ...|.+.
T Consensus         3 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~y~~~   75 (398)
T 3ele_A            3 VVNESMYQ---LGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPS----IPAPQIVNDTIKELVTDYDSVALHGYTSA   75 (398)
T ss_dssp             SSCHHHHH---HHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCC----SCCCHHHHHHHHHHHHHSCHHHHHSCCCT
T ss_pred             chhHHHhc---cccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCC----CCCCHHHHHHHHHHHhcCCccccCCcCCC
Confidence            45555544   3  457777776654333322246789999999854    5678999999999887532   4579888


Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP  166 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  166 (311)
                      .|..++|+++++++++.+|+++++++|++|+|+++++..++.+++++|.|+|+++.|+|.++...++..|.+++.++++.
T Consensus        76 ~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~  155 (398)
T 3ele_A           76 QGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADT  155 (398)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCT
T ss_pred             CCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCC
Confidence            89999999999999998898889999999999999999999999888768999999999999999999999999998753


Q ss_pred             CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH------hCCEEEEeccccCCccCCCCCCccc
Q 021547          167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK------LGILVIADEVYGHLAFGSTPYIPMG  240 (311)
Q Consensus       167 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~------~~~~li~D~ay~~~~~~~~~~~~~~  240 (311)
                       +++.+|+++|++.++++++++++++|+||||.+++.+++++|+++|++      ||+++|+||+|+.+.+++.....+.
T Consensus       156 -~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  234 (398)
T 3ele_A          156 -EHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVT  234 (398)
T ss_dssp             -TTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGG
T ss_pred             -cCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChH
Confidence             467899999999999899999999999999999999999999999999      9999999999999988764433322


Q ss_pred             ccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc--cccCCCchhHHHHHhhhhc
Q 021547          241 VFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG--VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       241 ~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~  310 (311)
                      .  ..+++++++|+||.|+++|+|+||+++++..  .....+...+.....  ...++++++|+++++++++
T Consensus       235 ~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  302 (398)
T 3ele_A          235 K--YYDNTLVCYSYSKSLSLPGERIGYVLVPDEV--YDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGA  302 (398)
T ss_dssp             G--TCSSEEEEEESTTTSSCTTTCCEEEECCTTS--TTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTC
T ss_pred             h--hcCCeEEEEehhhcCCCccceeEEEEEcchh--hhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcC
Confidence            2  2457899999999999999999999986542  211224444444322  2456788999999888764

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=100.00  E-value=1.7e-39  Score=300.76  Aligned_cols=274  Identities=20%  Similarity=0.365  Sum_probs=235.7

Q ss_pred             chHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCcHH
Q 021547           13 VKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-FNCYAPMFGLPL   91 (311)
Q Consensus        13 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~~~g~~~   91 (311)
                      ++++.+.   ...+.++++++..       .++++|+|+.|+|.    +++++.+.+++.+.+.... ..+|++..|..+
T Consensus         6 ~~~~~~~---~~~~~~~~~~~~~-------~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~   71 (422)
T 3fvs_A            6 QARRLDG---IDYNPWVEFVKLA-------SEHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPP   71 (422)
T ss_dssp             SCGGGTT---CCCCHHHHHHHHH-------HTSCCEECCCSSCS----SCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHH
T ss_pred             HHHHhhc---cCccHHHHHHHHh-------hcCCceEeCCCCCC----CCCCHHHHHHHHHHHhCCCccCCCCCCCCCHH
Confidence            4444444   5566777777542       24689999999964    6788999999999987654 458998889999


Q ss_pred             HHHHHHHHHhhcCCCCCCC-CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC----
Q 021547           92 ARRAVAEYLNRDLPYKLSA-DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP----  166 (311)
Q Consensus        92 lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~----  166 (311)
                      +|+++++++++.+|+.+++ ++|++|+|+++++..++.+++++| |+|+++.|+|.++...++..|.+++.+++..    
T Consensus        72 lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  150 (422)
T 3fvs_A           72 LTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEG-DEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQ  150 (422)
T ss_dssp             HHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCC
T ss_pred             HHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCC-CEEEEcCCCchhhHHHHHHcCCEEEEEeccccccc
Confidence            9999999999988988888 799999999999999999999999 9999999999999999999999999999865    


Q ss_pred             ------CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccc
Q 021547          167 ------ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG  240 (311)
Q Consensus       167 ------~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~  240 (311)
                            ..++.+|++.+++.++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++..+.++.
T Consensus       151 ~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  230 (422)
T 3fvs_A          151 NGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIA  230 (422)
T ss_dssp             SSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGG
T ss_pred             ccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChh
Confidence                  23567899999999999999999999999999999999999999999999999999999999999877666666


Q ss_pred             ccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          241 VFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       241 ~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      .++. .++++++.|+||.|+++|+|+||+++++        ++++.+..... ..+++++++|++++++|+
T Consensus       231 ~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  293 (422)
T 3fvs_A          231 SLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD--------HIMKHLRTVHQNSVFHCPTQSQAAVAESFE  293 (422)
T ss_dssp             GSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred             hcccccCcEEEEecchhccCCccceEEEEEeCH--------HHHHHHHHHHhhccCCCCcHHHHHHHHHHh
Confidence            6653 3689999999999999999999999853        47777776643 456789999999998876

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=100.00  E-value=3.1e-38  Score=289.27  Aligned_cols=275  Identities=24%  Similarity=0.410  Sum_probs=230.9

Q ss_pred             chHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 021547           13 VKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLA   92 (311)
Q Consensus        13 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~l   92 (311)
                      ++.+.+.   -..+.++++.+... .     .+++|+|+.|.+.    +++++.+.+++.+.+.... ..|++..|..++
T Consensus         3 ~~~~~~~---~~~~~~~~~~~~~~-~-----~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l   68 (389)
T 1gd9_A            3 LSDRLEL---VSASEIRKLFDIAA-G-----MKDVISLGIGEPD----FDTPQHIKEYAKEALDKGL-THYGPNIGLLEL   68 (389)
T ss_dssp             HHHHHHH---SCCCHHHHHHHHHH-T-----CSSCEECCCCSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHH
T ss_pred             hhhHhHh---CChhHHHHHHHHHh-h-----hcCeEecCCCCCC----CCCCHHHHHHHHHHHhCCC-CCCCCCCCcHHH
Confidence            4545544   45566777765421 1     2579999999864    4578999999999887543 478888899999


Q ss_pred             HHHHHHHHhhcCCCCCCCCC-EEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcc
Q 021547           93 RRAVAEYLNRDLPYKLSADD-IYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWE  171 (311)
Q Consensus        93 r~~ia~~l~~~~g~~~~~~~-v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  171 (311)
                      |+++++++.+.+|+.+++++ |++|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.++...++++.
T Consensus        69 ~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~  147 (389)
T 1gd9_A           69 REAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDG-EEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFR  147 (389)
T ss_dssp             HHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTT-CEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTC
T ss_pred             HHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCC-CEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCC
Confidence            99999999987787778889 9999999999999999999999 999999999999999999999999999876544677


Q ss_pred             cCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEE
Q 021547          172 VDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVIT  250 (311)
Q Consensus       172 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~  250 (311)
                      +|++.|++.++++++++++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++.++.++..++. .+++++
T Consensus       148 ~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~  227 (389)
T 1gd9_A          148 LNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTIT  227 (389)
T ss_dssp             CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEE
T ss_pred             CCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEE
Confidence            8999999999888999999999999999999999999999999999999999999998887654455555543 457899


Q ss_pred             EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +.|+||.|+++|+|+||++++.        +++++++.... ..+++++++|+++.++|++
T Consensus       228 ~~s~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  280 (389)
T 1gd9_A          228 VNGFSKTFAMTGWRLGFVAAPS--------WIIERMVKFQMYNATCPVTFIQYAAAKALKD  280 (389)
T ss_dssp             EEESTTTTTCGGGCCEEEECCH--------HHHHHHHHHHTTTTCSCCHHHHHHHHHHHTC
T ss_pred             EecChhhcCCcccceEEEEECH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHhC
Confidence            9999999999999999999853        47777776643 3568899999999888864

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=100.00  E-value=5.6e-39  Score=296.03  Aligned_cols=254  Identities=22%  Similarity=0.353  Sum_probs=224.0

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~  121 (311)
                      .++++|+|+.|+|+    +++++.+.+++.+.+......+|.+..|..++|+++++++.+.+|+.+++ ++|++|+|+++
T Consensus        21 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~   96 (410)
T 3e2y_A           21 ADPSVVNLGQGFPD----ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYG   96 (410)
T ss_dssp             TSTTSEECSSCCCC----SCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHH
T ss_pred             cCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHH
Confidence            45789999999964    67889999999999876555689988899999999999999888888888 89999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC---------CCCcccCHHHHHhhcCCCccEEEEeC
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP---------ERGWEVDLEAVEALADENTAAIVIIN  192 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~---------~~~~~~d~~~l~~~l~~~~~~i~i~~  192 (311)
                      ++..++.+++++| |+|+++.|+|..+...++..|.+++.+++.+         ..++.+|++++++.++++++++++++
T Consensus        97 a~~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~  175 (410)
T 3e2y_A           97 SLFNSIQGLVDPG-DEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNT  175 (410)
T ss_dssp             HHHHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEES
T ss_pred             HHHHHHHHhcCCC-CEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeC
Confidence            9999999999999 9999999999999999999999999998763         24567899999999998999999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEee
Q 021547          193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      |+||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.++..+.. .++++++.|+||.|+++|+|+||++++
T Consensus       176 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~  255 (410)
T 3e2y_A          176 PHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGP  255 (410)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECC
T ss_pred             CCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEEC
Confidence            9999999999999999999999999999999999999988766666665543 467999999999999999999999985


Q ss_pred             CCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          272 DPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      .        ++++.+..... ..+++++++|++++++|+
T Consensus       256 ~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  286 (410)
T 3e2y_A          256 A--------HLIKHLQTVQQNSFYTCATPLQAALAEAFW  286 (410)
T ss_dssp             H--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred             H--------HHHHHHHHHHHhhccCCChHHHHHHHHHHH
Confidence            3        47777776643 456789999999998876

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=100.00  E-value=2.1e-38  Score=290.29  Aligned_cols=253  Identities=23%  Similarity=0.373  Sum_probs=220.4

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .++++|+|+.|.+.    ++.++.+.+++.+.+... ...|.+..|..++|+++++++.+.+|.++++++|++|+|++++
T Consensus        28 ~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a  102 (388)
T 1j32_A           28 EGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQS  102 (388)
T ss_dssp             TTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred             cCCCEEECCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHH
Confidence            46889999999864    557899999999888654 3479888899999999999999888888888999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +.+++.+++++| |+|+++.|+|.++...++..|.+++.++....+++.+|++.|++.++++++++++++|+||||.+++
T Consensus       103 ~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~  181 (388)
T 1j32_A          103 IFNLMLAMIEPG-DEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYT  181 (388)
T ss_dssp             HHHHHHHHCCTT-CEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCC
Confidence            999999999999 9999999999999999999999999998765456789999999999888999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      .+++++|+++|+++|+++|+|++|+.+.+++.++.++..++.  .++++++.|+||.|+++|+|+||++++.        
T Consensus       182 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~--------  253 (388)
T 1j32_A          182 PDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPV--------  253 (388)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCH--------
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCH--------
Confidence            999999999999999999999999999887765556555543  4578999999999999999999999753        


Q ss_pred             hHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      ++++.+..... .+.++++++|+++.+.|+
T Consensus       254 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~  283 (388)
T 1j32_A          254 PLVKAATKIQGHSTSNVCTFAQYGAIAAYE  283 (388)
T ss_dssp             HHHHHHHHHHHTTTCSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcccCCCHHHHHHHHHHHh
Confidence            47777776633 456788999998888775

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3.4e-38  Score=291.43  Aligned_cols=255  Identities=18%  Similarity=0.318  Sum_probs=214.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~  121 (311)
                      .++++|+|+.|.+.    +++++.+.+++.+.+.......|.+..|..++|+++++++.+.+|.++++ ++|++|+|+++
T Consensus        35 ~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~  110 (412)
T 2x5d_A           35 RGEDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKE  110 (412)
T ss_dssp             TTCCCEECSSCCCC----SCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHH
T ss_pred             cCCCEEecCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHH
Confidence            47889999999864    55789999999988765434579888899999999999998877877787 79999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~  201 (311)
                      ++.+++.+++++| |+|+++.|+|.++...++..|.+++.++.....++.+|++.|++.++++++++++++|+||||.++
T Consensus       111 a~~~~~~~~~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~  189 (412)
T 2x5d_A          111 GLAHLMLATLDHG-DTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCV  189 (412)
T ss_dssp             HHHHHHHHHCCTT-CEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCC
T ss_pred             HHHHHHHHhCCCC-CEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcC
Confidence            9999999999999 999999999999999999999999999876544666899999999988899999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      +.+++++|+++|++||++||+|++|..+.+++.++.++..++. .++++++.|+||.|+++|+|+||++++.        
T Consensus       190 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------  261 (412)
T 2x5d_A          190 ELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNP--------  261 (412)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECH--------
T ss_pred             CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCH--------
Confidence            9999999999999999999999999999887655555555543 4578999999999999999999999842        


Q ss_pred             hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++.+..... .++++++++|+++.++|++
T Consensus       262 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  292 (412)
T 2x5d_A          262 ELVSALARIKSYHDYGTFTPLQVAAIAALEG  292 (412)
T ss_dssp             HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhhhccCCCHHHHHHHHHHHhC
Confidence            47777776543 3567899999999988864

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.9e-39  Score=298.99  Aligned_cols=255  Identities=22%  Similarity=0.367  Sum_probs=220.0

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .++++|+|+.|.|+    +++++.+.+++.+++......+|++..|..++|+++++++.+.+|.++++++|++|+|++++
T Consensus        55 ~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~a  130 (447)
T 3b46_A           55 QGRELINLGQGFFS----YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEG  130 (447)
T ss_dssp             TTSCCEECCCCSCS----SCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHH
T ss_pred             cCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence            36789999999864    56789999999999875334589988899999999999999888888888999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC----------CcccCHHHHHhhcCCCccEEEEeC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER----------GWEVDLEAVEALADENTAAIVIIN  192 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~d~~~l~~~l~~~~~~i~i~~  192 (311)
                      +.+++.+++++| |+|+++.|+|..+...++..|.+++.+++.+.+          ++.+|+++|++.++++++++++++
T Consensus       131 l~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~  209 (447)
T 3b46_A          131 ILSCLMGLLNAG-DEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINT  209 (447)
T ss_dssp             HHHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEES
T ss_pred             HHHHHHHHcCCC-CEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeC
Confidence            999999999999 999999999999999999999999999876542          578999999999988999999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC--CCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG--SIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~--~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      |+||||.+++.+++++|+++|++||++||+||+|..+.|++ ++.++..++  ..++++++.|+||.|+++|+|+||+++
T Consensus       210 p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~  288 (447)
T 3b46_A          210 PHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLS  288 (447)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEEC
T ss_pred             CCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEe
Confidence            99999999999999999999999999999999999998876 434444441  235789999999999999999999998


Q ss_pred             eCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547          271 NDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~  310 (311)
                      .++       ++++.+.... ...+++++++|++++++|++
T Consensus       289 ~~~-------~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~  322 (447)
T 3b46_A          289 LNA-------ELLSYAAKAHTRICFASPSPLQEACANSIND  322 (447)
T ss_dssp             SCH-------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHH
T ss_pred             CCH-------HHHHHHHHHHhhccCCCChHHHHHHHHHHhC
Confidence            322       4777777653 34567899999998888763

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=100.00  E-value=1.4e-38  Score=294.80  Aligned_cols=280  Identities=17%  Similarity=0.155  Sum_probs=222.7

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCC---CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHH
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHG---DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEY   99 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g---~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~   99 (311)
                      ...+.++.+...+.+.    ..+++|+|+.|   +|.  ...++++.+.+++.+.+......+|.+..|..++|++++++
T Consensus        31 ~~~~~i~~~~~~~~~~----~~~~~i~l~~G~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~  104 (420)
T 4f4e_A           31 APRDPILGLNEAFNAD----TRPTKVNLGVGVYTNED--GKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKL  104 (420)
T ss_dssp             CCCCHHHHHHHHHHHC----CCSSCEECCCCSCCCTT--SCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHhc----CCCCcEEeeeeeeECCC--CCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHH
Confidence            5667788888764332    45789999999   554  23556699999999998865556899999999999999999


Q ss_pred             HhhcCCCCCCCC--CEEEeCChHHHHHHHH--HHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHH
Q 021547          100 LNRDLPYKLSAD--DIYITLGCMEAVEIIL--TVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLE  175 (311)
Q Consensus       100 l~~~~g~~~~~~--~v~~t~g~~~a~~~~~--~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  175 (311)
                      +....+..++++  +|++|+|+++++.+++  .+++++| |+|+++.|+|.+|...++..|.+++.++....+++.+|++
T Consensus       105 l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~  183 (420)
T 4f4e_A          105 LLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPK-AKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFD  183 (420)
T ss_dssp             HHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTT-CCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHH
T ss_pred             hcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCC-CEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHH
Confidence            987555444677  8999999999999994  4667899 9999999999999999999999999999855567889999


Q ss_pred             HHHhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCccccc-CCCCCeEE
Q 021547          176 AVEALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIPMGVF-GSIVPVIT  250 (311)
Q Consensus       176 ~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~~~~~-~~~~~~i~  250 (311)
                      .+++.++   ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++. ...++..+ +..+++|+
T Consensus       184 ~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~  263 (420)
T 4f4e_A          184 GMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFV  263 (420)
T ss_dssp             HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEE
T ss_pred             HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEE
Confidence            9999887   5788899999999999999999999999999999999999999999988742 23333333 23568999


Q ss_pred             EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547          251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++|+||.|+++|+|+||+++....... ...+...++... ....+++.++|.+++.+|++
T Consensus       264 ~~S~SK~~~~~G~RiG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  323 (420)
T 4f4e_A          264 SSSFSKSFSLYGERVGALSIITDSKDE-AARVLSQLKRVIRTNYSNPPTHGGAIVAAVLAS  323 (420)
T ss_dssp             EEECTTTTTCGGGCEEEEEEECSSHHH-HHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHC
T ss_pred             EEeCCccCcCcCCCcEEEEEEcCCHHH-HHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcC
Confidence            999999999999999999763321000 001233444432 33456789999999887764

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=100.00  E-value=4.5e-38  Score=288.69  Aligned_cols=272  Identities=23%  Similarity=0.334  Sum_probs=225.6

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR  102 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~  102 (311)
                      -.+..++.+... .+.+.+.+++++|+|+.|++.    ++.++.+.+++.+.+.  ...+|++..|..++|+++++++.+
T Consensus         9 ~~~~~~~~~~~~-~~~~~~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~   81 (396)
T 3jtx_A            9 LKPYPFARLHEA-MQGISAPEGMEAVPLHIGEPK----HPTPKVITDALTASLH--ELEKYPLTAGLPELRQACANWLKR   81 (396)
T ss_dssp             CCSCHHHHHHHH-TTTCCCCTTCCCEECSCCSCC----SCCCHHHHHHHHHTGG--GGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred             CCCChHHHHHHH-HHhhhhccCCCeEEeCCcCCC----CCCCHHHHHHHHHHhh--hccCCCCCCCcHHHHHHHHHHHHH
Confidence            344555555543 333444468999999999854    6788999999998875  345799888999999999999999


Q ss_pred             cCCCC-CCCC-CEEEeCChHHHHHHHHHHHhcCCC----CEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHH
Q 021547          103 DLPYK-LSAD-DIYITLGCMEAVEIILTVITRLGA----ANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEA  176 (311)
Q Consensus       103 ~~g~~-~~~~-~v~~t~g~~~a~~~~~~~l~~~g~----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  176 (311)
                      .+|+. ++++ +|++|+|+++++.+++.+++++|.    |+|+++.|+|.++...++..|.+++.+++ ..+++.+|++.
T Consensus        82 ~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~~d~~~  160 (396)
T 3jtx_A           82 RYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFNPDWRS  160 (396)
T ss_dssp             HTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCCCCGGG
T ss_pred             hcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCccCHHH
Confidence            88887 7888 999999999999999999998873    69999999999999999999999999998 55677889999


Q ss_pred             HHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc----cC-CCCCeEEE
Q 021547          177 VEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV----FG-SIVPVITL  251 (311)
Q Consensus       177 l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~----~~-~~~~~i~i  251 (311)
                      |++.++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.....    +. ..++++++
T Consensus       161 l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  240 (396)
T 3jtx_A          161 ISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMF  240 (396)
T ss_dssp             SCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEE
T ss_pred             HHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEE
Confidence            99988889999999999999999999999999999999999999999999999887633322211    11 24678999


Q ss_pred             ecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          252 GSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       252 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      .|+||.|+++|+|+||++++.        ++++.+..... .++++++++|+++.++|++
T Consensus       241 ~s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  292 (396)
T 3jtx_A          241 TSLSKRSNVPGLRSGFVAGDA--------ELLKNFLLYRTYHGSAMSIPVQRASIAAWDD  292 (396)
T ss_dssp             EESTTTSSCGGGCCEEEEECH--------HHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC
T ss_pred             eccccccCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHhCC
Confidence            999999999999999998742        47777776643 3567899999999988864

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=7.9e-38  Score=286.95  Aligned_cols=271  Identities=20%  Similarity=0.298  Sum_probs=227.5

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR  102 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~  102 (311)
                      ...+.++++.....+...  .++++|+|+.|.+.    ++.++.+.+++.+.+.... ..|.+..|..++|+++++++.+
T Consensus        21 ~~~~~~~~~~~~~~~~~~--~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~la~~~~~   93 (389)
T 1o4s_A           21 IPISKTMELDAKAKALIK--KGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYELREGIAKRIGE   93 (389)
T ss_dssp             SCCCSSHHHHHHHHHHHH--TTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHHHHHHHHH
T ss_pred             cCccHHHHHHHHHHHHHh--cCCCEEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHH
Confidence            555667766654433221  36789999999864    4568999999999886543 4788878999999999999988


Q ss_pred             cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547          103 DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD  182 (311)
Q Consensus       103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~  182 (311)
                      .+|.++++++|++|+|+++++..++.+++++| |+|+++.|+|.++...++..|.+++.++...++++.+|+++|++.++
T Consensus        94 ~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~  172 (389)
T 1o4s_A           94 RYKKDISPDQVVVTNGAKQALFNAFMALLDPG-DEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV  172 (389)
T ss_dssp             HHTCCCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC
T ss_pred             HhCCCCCHHHEEEecCHHHHHHHHHHHhCCCC-CEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc
Confidence            77877788999999999999999999999999 99999999999999999999999999988654567899999999998


Q ss_pred             CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCC
Q 021547          183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVP  261 (311)
Q Consensus       183 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~  261 (311)
                      ++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|+.+.+++ +..++..++. .++++++.|+||.|+++
T Consensus       173 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~~  251 (389)
T 1o4s_A          173 GKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYINGFSKSHSMT  251 (389)
T ss_dssp             TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEESTTTTTCG
T ss_pred             cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEeechhhcCCc
Confidence            889999999999999999999999999999999999999999999988765 3334444443 45789999999999999


Q ss_pred             cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          262 GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       262 G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      |+|+||+++++        ++++.+..... ..+++++++|.++.++|++
T Consensus       252 G~r~G~l~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  293 (389)
T 1o4s_A          252 GWRVGYLISSE--------KVATAVSKIQSHTTSCINTVAQYAALKALEV  293 (389)
T ss_dssp             GGCCEEEECCH--------HHHHHHHHHHHHHTCSCCHHHHHHHHHHTTC
T ss_pred             ccceEEEEeCH--------HHHHHHHHHhhhcccCCCHHHHHHHHHHHhc
Confidence            99999999853        47777776643 3467899999999888864

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=100.00  E-value=5.9e-38  Score=287.68  Aligned_cols=263  Identities=19%  Similarity=0.310  Sum_probs=214.8

Q ss_pred             hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcC
Q 021547           25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL  104 (311)
Q Consensus        25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~  104 (311)
                      ++.++.++....+ +.+ +++++|+|+.|.+.    ++.++.+.+++.+.+.... ..|.+..|..++|+++++++++.+
T Consensus        13 ~~~~~~~~~~~~~-~~~-~g~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~   85 (391)
T 3h14_A           13 PFIVMDVMEAARR-AEE-AGRRIIHMEVGQPG----TGAPRGAVEALAKSLETDA-LGYTVALGLPALRQRIARLYGEWY   85 (391)
T ss_dssp             CCTTHHHHHHHHH-HHH-TTCCCEECCCSSCS----SCSCHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHH-HHh-cCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCChHHHHHHHHHHHHHHh
Confidence            4455555543322 221 47899999999854    6678999999999886543 479888899999999999999988


Q ss_pred             CCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC
Q 021547          105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN  184 (311)
Q Consensus       105 g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~  184 (311)
                      |+++++++|++|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.+++..+.++.+|++.+++.   +
T Consensus        86 g~~~~~~~v~~t~g~~~al~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---~  161 (391)
T 3h14_A           86 GVDLDPGRVVITPGSSGGFLLAFTALFDSG-DRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL---D  161 (391)
T ss_dssp             CCCCCGGGEEEESSHHHHHHHHHHHHCCTT-CEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---C
T ss_pred             CCCCCHHHEEEecChHHHHHHHHHHhcCCC-CEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc---C
Confidence            988899999999999999999999999999 999999999999999999999999999987666778899999887   7


Q ss_pred             ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce
Q 021547          185 TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR  264 (311)
Q Consensus       185 ~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r  264 (311)
                      ++++++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++... .+..+  .+++++++|+||.++++|+|
T Consensus       162 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~--~~~~i~~~s~sK~~g~~G~r  238 (391)
T 3h14_A          162 LAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV-TALEL--TDECYVINSFSKYFSMTGWR  238 (391)
T ss_dssp             CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC-CGGGT--CSSSEEEEESSSTTCCTTSC
T ss_pred             CeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc-Chhhc--CCCEEEEEechhccCCccce
Confidence            8999999999999999999999999999999999999999999998876532 32222  45789999999999999999


Q ss_pred             eeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          265 FGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       265 ~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      +||++++.        ++++.+..... .+.++++++|+++.+.++
T Consensus       239 ~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  276 (391)
T 3h14_A          239 VGWMVVPE--------DQVRVVERIAQNMFICAPHASQVAALAALD  276 (391)
T ss_dssp             CEEEECCG--------GGHHHHHHHHHHTTCCCCHHHHHHHHHHTT
T ss_pred             eEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhC
Confidence            99999854        36677666533 456788999998877664

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=100.00  E-value=1.1e-37  Score=286.85  Aligned_cols=280  Identities=14%  Similarity=0.145  Sum_probs=218.3

Q ss_pred             hhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547           24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR  102 (311)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~  102 (311)
                      .++.++.+.+.+.+    ...+.+|+|+.|.| +..+..+..+.+.+++.+........+|.+..|.+++|+++++++++
T Consensus        11 ~~~~i~~~~~~~~~----~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~   86 (401)
T 7aat_A           11 PPDPILGVTEAFKR----DTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALG   86 (401)
T ss_dssp             CCCHHHHHHHHHHH----CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred             CCChhHHHHHHHhh----CCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcC
Confidence            34556666654322    24567999999987 43333345578899988877644456899989999999999999998


Q ss_pred             cCCCCCCCCCEEE--eCChHHHHHHHHHHHh---cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHH
Q 021547          103 DLPYKLSADDIYI--TLGCMEAVEIILTVIT---RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV  177 (311)
Q Consensus       103 ~~g~~~~~~~v~~--t~g~~~a~~~~~~~l~---~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  177 (311)
                      .+|+.+++++|++  |+|+++++.+++.++.   ++| |+|+++.|+|.+|...++..|.+++.+++...+++.+|++.+
T Consensus        87 ~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  165 (401)
T 7aat_A           87 ENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFS-RDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGA  165 (401)
T ss_dssp             TTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTC-CEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHH
T ss_pred             CCccccccCceEEEecCcchHHHHHHHHHHHHhccCC-CEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHH
Confidence            8887778999987  9999999999887775   889 999999999999999999999999999986656788999966


Q ss_pred             HhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC--CCCccccc-CCCCCeEEE
Q 021547          178 EALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST--PYIPMGVF-GSIVPVITL  251 (311)
Q Consensus       178 ~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~--~~~~~~~~-~~~~~~i~i  251 (311)
                      ++.+.   ++++++++++||||||.+++.+++++|+++|++||+++|+||+|+.+.+++.  +..++..+ ....++|++
T Consensus       166 ~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~  245 (401)
T 7aat_A          166 MEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLS  245 (401)
T ss_dssp             HHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEE
T ss_pred             HHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEE
Confidence            66553   5788999999999999999999999999999999999999999999887643  12222222 345578999


Q ss_pred             ecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhh
Q 021547          252 GSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       252 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~  309 (311)
                      +|+||.|+++|+|+||++++...... ...+++.++... ....+++.++|.+++++++
T Consensus       246 ~S~sK~~~~~G~RiG~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  303 (401)
T 7aat_A          246 QSYAKNMGLYGERAGAFTVICRDAEE-AKRVESQLKILIRPMYSNPPMNGARIASLILN  303 (401)
T ss_dssp             EECTTTSCCGGGCEEEEEEECSSHHH-HHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred             ecCCcccccccCceEEEEEEeCCHHH-HHHHHHHHHHHHHhccCCCChHHHHHHHHHhC
Confidence            99999999999999999874322110 012455555543 2345677888888887764

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.5e-37  Score=285.54  Aligned_cols=252  Identities=26%  Similarity=0.423  Sum_probs=217.3

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAV  123 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~  123 (311)
                      .++|+|+.|.+.    +++++.+.+++.+.+... ...|.+..|..++|+++++++.+.+|.+++++ +|++|+|+++++
T Consensus        25 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al   99 (411)
T 2o0r_A           25 IGAVNLGQGFPD----EDGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAI   99 (411)
T ss_dssp             TTCEESSCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHH
T ss_pred             CCeeeccCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHH
Confidence            468999999864    557899999999998753 45798888999999999999998888878888 999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC-CCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE-RGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      .+++.+++++| |+|+++.|+|.++...++..|.+++.++...+ .++.+|++.|++.++++++++++++|+||||.+++
T Consensus       100 ~~~~~~~~~~g-d~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~  178 (411)
T 2o0r_A          100 AAAVLGLVEPG-SEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLS  178 (411)
T ss_dssp             HHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHhcCCC-CEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCC
Confidence            99999999999 99999999999999999999999999987543 35679999999999888999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      .+++++|+++|+++|++||+|++|..+.+++..+.++..++. .++++++.|+||.++++|+|+||++++.        +
T Consensus       179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~  250 (411)
T 2o0r_A          179 ATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPA--------E  250 (411)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCH--------H
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCH--------H
Confidence            999999999999999999999999999887765556655543 4578999999999999999999999842        4


Q ss_pred             HHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          282 IVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       282 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++.+..... ..+++++++|+++.++|++
T Consensus       251 ~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  280 (411)
T 2o0r_A          251 LIAGVRAAKQYLSYVGGAPFQPAVALALDT  280 (411)
T ss_dssp             HHHHHHHHHHHHTSCCCTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhccCCCChHHHHHHHHHHhC
Confidence            6777766532 3456788899998888763

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=100.00  E-value=1.2e-37  Score=289.20  Aligned_cols=273  Identities=21%  Similarity=0.214  Sum_probs=221.5

Q ss_pred             ccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHH-------------HHHHHHHH
Q 021547            9 WGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVA-------------EDAIVDSV   75 (311)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~-------------~~a~~~~~   75 (311)
                      |...+|++.+.   ..++.++++.+...+     .++++|+|+.|.|+.. .+|. ...             .+..... 
T Consensus         3 ~~~~~s~~~~~---~~~~~~~~~~~~~~~-----~~~~~i~l~~G~p~~~-~~p~-~~~~~~~~~~~~~~~~~~~~~~~-   71 (425)
T 2r2n_A            3 YARFITAASAA---RNPSPIRTMTDILSR-----GPKSMISLAGGLPNPN-MFPF-KTAVITVENGKTIQFGEEMMKRA-   71 (425)
T ss_dssp             GGGGSCHHHHT---CCCCSGGGHHHHHHH-----SCTTCEECCCCCCCGG-GCSE-EEEEEEETTSCCEEECHHHHHHH-
T ss_pred             hhHHHHHHHhc---CCCchHHHHHHHhhc-----CCCCeEEcCCcCCCch-hCCH-HHHHHHHhhcccccccccchhhh-
Confidence            55667877777   677788887765322     1467999999988631 1221 100             1111111 


Q ss_pred             hcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-------CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch
Q 021547           76 RSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLS-------ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY  148 (311)
Q Consensus        76 ~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-------~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~  148 (311)
                           .+|.+..|.+++|+++++++.+.+|....       +++|++|+|+++++.+++.+++++| |+|+++.|+|..+
T Consensus        72 -----~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~  145 (425)
T 2r2n_A           72 -----LQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPG-DNVLLDEPAYSGT  145 (425)
T ss_dssp             -----TSCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTT-CEEEEESSCCHHH
T ss_pred             -----cCCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCC-CEEEEeCCCcHHH
Confidence                 37999999999999999999988887764       3799999999999999999999999 9999999999999


Q ss_pred             HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC------------CCccEEEE-eCCCCCCccCCCHHHHHHHHHHHHH
Q 021547          149 ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD------------ENTAAIVI-INPCNPCGNVLTYQHLQKIAETARK  215 (311)
Q Consensus       149 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~------------~~~~~i~i-~~p~nptG~~~~~~~l~~l~~l~~~  215 (311)
                      ...++..|.+++.++.+.   .++|++.|++.++            ++++++++ ++|+||||.+++.+++++|+++|++
T Consensus       146 ~~~~~~~g~~~~~v~~~~---~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~  222 (425)
T 2r2n_A          146 LQSLHPLGCNIINVASDE---SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARK  222 (425)
T ss_dssp             HHHHGGGTCEEEEECEET---TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCEEEEeCcCC---CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHH
Confidence            999999999999998743   2589999999876            35787766 5889999999999999999999999


Q ss_pred             hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-ccc
Q 021547          216 LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRS  294 (311)
Q Consensus       216 ~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~  294 (311)
                      ||++||+||+|+.+.|++.++.++..++..+++|+++|+||.|+ +|+|+||+++++        ++++.+..... ..+
T Consensus       223 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~--------~l~~~l~~~~~~~~~  293 (425)
T 2r2n_A          223 YDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPK--------PLIERVILHIQVSTL  293 (425)
T ss_dssp             TTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEH--------HHHHHHHHHHHTTTC
T ss_pred             cCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCH--------HHHHHHHHHHHHhcC
Confidence            99999999999999888766667767766678999999999998 999999999864        47777777643 457


Q ss_pred             CCCchhHHHHHhhhhc
Q 021547          295 GPSTLIQVCEMFLLVN  310 (311)
Q Consensus       295 ~~~~~~q~~~~~~l~~  310 (311)
                      ++|+++|+++.++|++
T Consensus       294 ~~~~~~q~a~~~~l~~  309 (425)
T 2r2n_A          294 HPSTFNQLMISQLLHE  309 (425)
T ss_dssp             SSCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHh
Confidence            8899999999988863

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=100.00  E-value=3.6e-37  Score=291.62  Aligned_cols=259  Identities=20%  Similarity=0.317  Sum_probs=218.2

Q ss_pred             CCeeecCCCCCCCCCCCC-------------------------CcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFR-------------------------TAAVAEDAIVDSVRSS---MFNCYAPMFGLPLARRAV   96 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~-------------------------~~~~~~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~i   96 (311)
                      .++|+.++|+|..++..+                         .|+.+.+++.+.+...   ....|.+..|..++|+++
T Consensus        64 ~~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~i  143 (500)
T 3tcm_A           64 DEILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAI  143 (500)
T ss_dssp             SSCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHH
T ss_pred             HHhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCCcccCCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHH
Confidence            389999999985443321                         3455666666666542   456899999999999999


Q ss_pred             HHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHH
Q 021547           97 AEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLE  175 (311)
Q Consensus        97 a~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  175 (311)
                      ++++.+++|+++++++|++|+|+++++..++.+++ ++| |.|+++.|+|..|...++..|.+++.++++.+.+|.+|++
T Consensus       144 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  222 (500)
T 3tcm_A          144 ASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEK-DGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETS  222 (500)
T ss_dssp             HHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTT-EEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHH
T ss_pred             HHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCC-CEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHH
Confidence            99999888988999999999999999999999998 799 9999999999999999999999999999887778899999


Q ss_pred             HHHhhcCC------CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC-CCCCccc----cc--
Q 021547          176 AVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS-TPYIPMG----VF--  242 (311)
Q Consensus       176 ~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~-~~~~~~~----~~--  242 (311)
                      .|++.+++      +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.|++ .++.++.    .+  
T Consensus       223 ~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~  302 (500)
T 3tcm_A          223 DVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGY  302 (500)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTC
T ss_pred             HHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhcc
Confidence            99998876      78899999999999999999999999999999999999999999998864 3444433    22  


Q ss_pred             -CCCCCeEEEecCcccC-CCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          243 -GSIVPVITLGSISKRW-IVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       243 -~~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                       ....++|+++|+||.| |++|+|+||+++....     +++++.+........+++.++|++++.+++
T Consensus       303 ~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~  366 (500)
T 3tcm_A          303 GEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFS-----APVREQIYKIASVNLCSNITGQILASLVMN  366 (500)
T ss_dssp             SSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCC-----TTHHHHHHHHHHTTCCCCHHHHHHHHHHHS
T ss_pred             ccCCeEEEEEecCCccCCCCCccceEEEEEeCCC-----HHHHHHHHHHHhcccCCCHHHHHHHHHHhc
Confidence             3344689999999998 8999999999984211     137788777766567889999999998875

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=100.00  E-value=1.8e-37  Score=286.01  Aligned_cols=258  Identities=27%  Similarity=0.466  Sum_probs=217.8

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++++|+|+.|.|..+ .++.++.+.+++.+.+.... ..|++..|..++|+++++++.+.+|+++++++|++|+|++++
T Consensus        36 ~g~~~i~l~~~~~~~~-~~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a  113 (406)
T 1xi9_A           36 KGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEGH-NYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEA  113 (406)
T ss_dssp             TTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred             cCCCEEEecCCCCCcC-CCCCCHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHH
Confidence            3688999999986311 25678999999998886543 378888899999999999999888888889999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +.+++.+++++| |+|+++.|+|.++...++..|.+++.++.+.++++.+|++.|++.++++++++++++|+||||.+++
T Consensus       114 l~~~~~~l~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~  192 (406)
T 1xi9_A          114 LQLIFGALLDPG-DEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYD  192 (406)
T ss_dssp             HHHHHHHHCCTT-CEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHhCCCC-CEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcC
Confidence            999999999999 9999999999999999999999999998865456789999999999888999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCC-eEEEecCcccCCCCcceeeEEE--eeCCCCccch
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-VITLGSISKRWIVPGWRFGWLA--TNDPNGVLQK  279 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~i~s~sK~~~~~G~r~G~i~--~~~~~~~~~~  279 (311)
                      .+++++|+++|+++|++||+|++|+.+.+++ +..++..++ .++ +|+++|+||.++++|+|+||++  ++.+.    .
T Consensus       193 ~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~----~  266 (406)
T 1xi9_A          193 KKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENK----L  266 (406)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCT----T
T ss_pred             HHHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEEEEeccccccCCCccEEEEEEEecCchh----H
Confidence            9999999999999999999999999988743 334455554 456 8999999999999999999998  54210    0


Q ss_pred             hhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          280 SGIVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .++++++.......+++++++|+++.++|+
T Consensus       267 ~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~  296 (406)
T 1xi9_A          267 SEVREAIDRLARIRLCPNTPAQFAAIAGLT  296 (406)
T ss_dssp             HHHHHHHHHHHHHTCCSCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence            036777766543226789999999998885

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=9.9e-38  Score=284.73  Aligned_cols=253  Identities=18%  Similarity=0.239  Sum_probs=214.6

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~  121 (311)
                      .++++|+|+.|.+.    ++.++.+.+++.+.+.......|++..|..++|+++++++.+.+|.+++++ +|++|+|+++
T Consensus        23 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~   98 (376)
T 2dou_A           23 RGVGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQE   98 (376)
T ss_dssp             TTCCCEECSSCCCC----CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHH
T ss_pred             cCCCEEeccCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHH
Confidence            47889999999864    456899999999988654345787766889999999999988778777776 9999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~  201 (311)
                      ++.+++.+++++| |+|+++.|+|.++...++..|.+++.++.  .+++.+|++.+++.++++++++++++|+||||.++
T Consensus        99 a~~~~~~~l~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~  175 (376)
T 2dou_A           99 GLAHLLLALTEPE-DLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVA  175 (376)
T ss_dssp             HHHHHHHHHCCTT-CEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCC
T ss_pred             HHHHHHHHhcCCC-CEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccC
Confidence            9999999999999 99999999999999999999999999987  45667899999988877889999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      +.+++++|+++|++||+++|+||+|..+.+++.....+...+..++++++.|+||.|+++|+|+||++++.        +
T Consensus       176 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~  247 (376)
T 2dou_A          176 DWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE--------E  247 (376)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECH--------H
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCH--------H
Confidence            99999999999999999999999999988866332223322334578999999999999999999998743        4


Q ss_pred             HHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          282 IVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       282 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++.++.... .+.++++++|+++.++|++
T Consensus       248 ~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  277 (376)
T 2dou_A          248 ALARLERVKGVIDFNQYAGVLRMGVEALKT  277 (376)
T ss_dssp             HHHHHHHHHHHHCCCSCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHhcccCCCHHHHHHHHHHHhC
Confidence            7777776543 3456789999999988864

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=100.00  E-value=4.2e-37  Score=282.32  Aligned_cols=275  Identities=17%  Similarity=0.157  Sum_probs=218.7

Q ss_pred             hhhhHHHHHHHHHhhhccCCCCCeeecCCC---CCCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCcHHHHHHHHHH
Q 021547           24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHG---DPAAFPCFRTAAVAEDAIVD-SVRSSMFNCYAPMFGLPLARRAVAEY   99 (311)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g---~p~~~~~~~~~~~~~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~ia~~   99 (311)
                      +.+.++.+...+    .+...+++|+|+.|   +|.  ...+.++.+.+++.+ .+......+|.+..|..++|++++++
T Consensus         9 ~~~~~~~~~~~~----~~~~~~~~i~l~~g~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~   82 (397)
T 3fsl_A            9 AGDPILTLMERF----KEDPRSDKVNLSIGLYYNED--GIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPL   82 (397)
T ss_dssp             CCCHHHHHHHHH----HTCCCSCCEECSSCCCCCTT--SCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCchhhHHHHH----hcCCCCCeEEEeeeEEECCC--CCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHH
Confidence            455666666543    22356789999999   544  235566999999999 88765556899889999999999999


Q ss_pred             HhhcCCCCCCCC--CEEEeCChHHHHHHHH--HHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHH
Q 021547          100 LNRDLPYKLSAD--DIYITLGCMEAVEIIL--TVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLE  175 (311)
Q Consensus       100 l~~~~g~~~~~~--~v~~t~g~~~a~~~~~--~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  175 (311)
                      +....+..++++  +|++|+|+++++..++  .+++++| |+|+++.|+|.++...++..|.+++.++....+++.+|++
T Consensus        83 ~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  161 (397)
T 3fsl_A           83 LFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPE-SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFN  161 (397)
T ss_dssp             HHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTT-CCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHH
T ss_pred             HhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCC-CeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHH
Confidence            987655444678  8999999999999995  4567899 9999999999999999999999999998855567899999


Q ss_pred             HHHhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC-CCCCccccc-CCCCCeEE
Q 021547          176 AVEALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS-TPYIPMGVF-GSIVPVIT  250 (311)
Q Consensus       176 ~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~-~~~~~~~~~-~~~~~~i~  250 (311)
                      .+++.++   ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++ ....++..+ +..+++|+
T Consensus       162 ~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~  241 (397)
T 3fsl_A          162 DLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALV  241 (397)
T ss_dssp             HHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEE
T ss_pred             HHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEE
Confidence            9999887   567888999999999999999999999999999999999999999988863 222333333 34568999


Q ss_pred             EecCcccCCCCcceeeEEEeeCCCCccchhhHHH----HHhhh-hccccCCCchhHHHHHhhhhc
Q 021547          251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVG----SIKAC-LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++|+||.|+++|+|+||++++...     ++++.    .++.. .....+++.++|.+++.++++
T Consensus       242 ~~S~SK~~~~~G~riG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  301 (397)
T 3fsl_A          242 SNSFSKIFSLYGERVGGLSVMCED-----AEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLND  301 (397)
T ss_dssp             EEECTTTTTCGGGCCEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTS
T ss_pred             EecccccccCcCCCeeEEEEecCC-----HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcC
Confidence            999999999999999999874322     12333    33333 233456788999999887764

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=100.00  E-value=1.9e-37  Score=288.20  Aligned_cols=272  Identities=20%  Similarity=0.231  Sum_probs=227.9

Q ss_pred             hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhc
Q 021547           24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRD  103 (311)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~  103 (311)
                      .++.++.++....+ +.+..++++|+|+.|.+.    +++++.+.+++.+.+.......|.+..|..++|+++++++++.
T Consensus        24 ~~~~~~~~~~~~~~-~~~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~   98 (437)
T 3g0t_A           24 GMASIRDLVALVTN-LEKATGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLF   98 (437)
T ss_dssp             GGCCHHHHHHHHHH-HHHHHTCCCEECCCCSCC----SCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHH-HHHhcCCCEEeccCcCCC----CCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHh
Confidence            35667777765433 222247899999999864    5788999999999887654358999889999999999999988


Q ss_pred             CCCCCCCCCEEEeCChHHHHHHHHHHHh--cCCCC--EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHh
Q 021547          104 LPYKLSADDIYITLGCMEAVEIILTVIT--RLGAA--NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEA  179 (311)
Q Consensus       104 ~g~~~~~~~v~~t~g~~~a~~~~~~~l~--~~g~d--~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~  179 (311)
                      +|+.+++++|++|+|+++++.+++.+++  ++| |  +|+++.|+|.++...++..|.+++.+++. .+++.+|++.|++
T Consensus        99 ~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~g-d~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~  176 (437)
T 3g0t_A           99 VNIDIPARACVPTVGSMQGCFVSFLVANRTHKN-REYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLES  176 (437)
T ss_dssp             HCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTT-CSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHH
T ss_pred             hCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCC-CccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHH
Confidence            8988899999999999999999999998  999 9  99999999999999999999999999986 4567789999999


Q ss_pred             hc-CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCC----cc-cccCC-CCCeEEEe
Q 021547          180 LA-DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI----PM-GVFGS-IVPVITLG  252 (311)
Q Consensus       180 ~l-~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~----~~-~~~~~-~~~~i~i~  252 (311)
                      .+ +++++++++++|+||||.+++.+++++|+++|++||++||+|++|+.+.+++....    ++ ..+.. .++++++.
T Consensus       177 ~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  256 (437)
T 3g0t_A          177 YLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILAL  256 (437)
T ss_dssp             HHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEE
T ss_pred             HHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEE
Confidence            98 77899999999999999999999999999999999999999999999887643221    11 33333 56789999


Q ss_pred             cCcccCCCCcceeeEEEeeCCCCccchhhHHH-H-----------------Hhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          253 SISKRWIVPGWRFGWLATNDPNGVLQKSGIVG-S-----------------IKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       253 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~-~-----------------~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      |+||.++++|+|+||++++.        ++++ .                 +..... ..+++++++|+++.++|++
T Consensus       257 s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  325 (437)
T 3g0t_A          257 SSSKAFSYAGQRIGVLMISG--------KLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKA  325 (437)
T ss_dssp             ESTTTTSCGGGCCEEEEECH--------HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHH
T ss_pred             cCccCCCCccceeEEEEECH--------HHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhC
Confidence            99999999999999999853        3556 5                 555432 3568899999999988764

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=100.00  E-value=3e-37  Score=286.44  Aligned_cols=253  Identities=25%  Similarity=0.412  Sum_probs=219.2

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCME  121 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~  121 (311)
                      +++|+|+.|.+.    +++++.+.+++.+.+...  ....|++..|..++|+++++++++.+|.+++++ +|++|+|+++
T Consensus        37 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~  112 (429)
T 1yiz_A           37 YKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYE  112 (429)
T ss_dssp             HCCEECCSSSCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHH
T ss_pred             CCEEEecCCCCC----CCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHH
Confidence            478999999864    457899999999988652  234788878999999999999988778778888 9999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC--------CcccCHHHHHhhcCCCccEEEEeCC
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER--------GWEVDLEAVEALADENTAAIVIINP  193 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~d~~~l~~~l~~~~~~i~i~~p  193 (311)
                      ++.+++.+++++| |+|+++.|+|..+...++..|.+++.++.....        ++.+|++.|++.++++++++++++|
T Consensus       113 a~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p  191 (429)
T 1yiz_A          113 ALYATIQGHVDEG-DEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTP  191 (429)
T ss_dssp             HHHHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESS
T ss_pred             HHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCC
Confidence            9999999999999 999999999999999999999999999876542        5679999999999888999999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      +||||.+++.+++++|+++|++||++||+||+|..+.+++.++.++..+. ..++++++.|+||.|+++|+|+||++++.
T Consensus       192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~  271 (429)
T 1yiz_A          192 HNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE  271 (429)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCH
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCH
Confidence            99999999999999999999999999999999999988776555665553 35578999999999999999999999853


Q ss_pred             CCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547          273 PNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~  310 (311)
                              ++++.+.... ..++++++++|+++.++|++
T Consensus       272 --------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  302 (429)
T 1yiz_A          272 --------ALLKNLQMVHQNCVYTCATPIQEAIAVGFET  302 (429)
T ss_dssp             --------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHhhcccCCChHHHHHHHHHHhc
Confidence                    4777777653 34567899999999888864

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.4e-37  Score=292.59  Aligned_cols=259  Identities=22%  Similarity=0.358  Sum_probs=205.3

Q ss_pred             CCeeecCCCCCCCCCCCC---------------------CcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFR---------------------TAAVAEDAIVDSVRSS---MFNCYAPMFGLPLARRAVAEYL  100 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~---------------------~~~~~~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l  100 (311)
                      .++|++++|+|..+...+                     .|..+.+++.+.+...   ....|+++.|..++|+++++++
T Consensus        63 ~~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~  142 (498)
T 3ihj_A           63 TEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYI  142 (498)
T ss_dssp             SSCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHH
T ss_pred             hhhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            499999999986432211                     1444455556666532   3457999999999999999999


Q ss_pred             hhcC-CCCCCCCCEEEeCChHHHHHHHHHHHhcCCCC----EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHH
Q 021547          101 NRDL-PYKLSADDIYITLGCMEAVEIILTVITRLGAA----NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLE  175 (311)
Q Consensus       101 ~~~~-g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  175 (311)
                      .+++ |+++++++|++|+|+++++..++.+++++| |    .|+++.|+|+.|...++..|.+++.++++.+++|.+|++
T Consensus       143 ~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~g-d~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~  221 (498)
T 3ihj_A          143 TRRDGGVPADPDNIYLTTGASDGISTILKILVSGG-GKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVN  221 (498)
T ss_dssp             HHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCC-GGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHH
T ss_pred             HHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCC-CCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHH
Confidence            9888 488899999999999999999999999887 5    999999999999999999999999999987778999999


Q ss_pred             HHHhhcCC-----CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCcccccC------
Q 021547          176 AVEALADE-----NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIPMGVFG------  243 (311)
Q Consensus       176 ~l~~~l~~-----~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~~~~~~------  243 (311)
                      +|++.+++     +++++++++|+||||.+++.+++++|+++|++||++||+||+|+.+.|++. ++.++..+.      
T Consensus       222 ~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~  301 (498)
T 3ihj_A          222 ELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPE  301 (498)
T ss_dssp             HHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHH
T ss_pred             HHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhccc
Confidence            99998876     589999999999999999999999999999999999999999999999753 555554431      


Q ss_pred             --CCCCeEEEecCcccC-CCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          244 --SIVPVITLGSISKRW-IVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       244 --~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                        ...++|+++|+||.| |++|+|+||+++....     +++++.+........+++.++|.+++.+++
T Consensus       302 ~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~-----~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~  365 (498)
T 3ihj_A          302 YSSNVELASFHSTSKGYMGECGYRGGYMEVINLH-----PEIKGQLVKLLSVRLCPPVSGQAAMDIVVN  365 (498)
T ss_dssp             HHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCC-----HHHHHHHHHHHHHSCCCCHHHHHHHHHHTC
T ss_pred             ccCceeEEEEeccccccccCcccceEEEEEecCC-----HHHHHHHHHHHhccCCCCHHHHHHHHHHhc
Confidence              234689999999999 7899999999852211     257888877766567889999999998875

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=100.00  E-value=5.9e-37  Score=280.54  Aligned_cols=251  Identities=25%  Similarity=0.367  Sum_probs=217.3

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAV  123 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~  123 (311)
                      +++|+|+.|.+.    +++++.+.+++.+.+... ...|.+..|..++|+++++++.+.+|.+++++ +|++|+|+++++
T Consensus        30 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~  104 (386)
T 1u08_A           30 HQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEAL  104 (386)
T ss_dssp             TTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHH
T ss_pred             CCeEEecCCCCC----CCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHH
Confidence            468999999864    557899999999988753 34798888999999999999988888888888 999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      .+++.+++++| |+|+++.|+|..+...++..|.+++.++...+ ++.+|++.|++.++++++++++++|+||||.+++.
T Consensus       105 ~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  182 (386)
T 1u08_A          105 YAAITALVRNG-DEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQ  182 (386)
T ss_dssp             HHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHhCCCC-CEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCH
Confidence            99999999999 99999999999999999999999999987543 57899999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      +++++|+++|+++|+++|+|++|+.+.+++.++.++..++ ..++++++.|+||.|+++|+|+||++++.        ++
T Consensus       183 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~  254 (386)
T 1u08_A          183 ADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA--------PI  254 (386)
T ss_dssp             HHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH--------HH
T ss_pred             HHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH--------HH
Confidence            9999999999999999999999999988776555554442 24578999999999999999999999853        47


Q ss_pred             HHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.++.... ..+++++++|+++.++|++
T Consensus       255 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  283 (386)
T 1u08_A          255 SAEIRKVHQYLTFSVNTPAQLALADMLRA  283 (386)
T ss_dssp             HHHHHHHHHHHTSSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhccCCChHHHHHHHHHHhC
Confidence            777776543 3567789999999888864

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=100.00  E-value=1.4e-37  Score=283.54  Aligned_cols=249  Identities=21%  Similarity=0.299  Sum_probs=218.5

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .++++|+|+.|++.    +++++.+.+++.+.+... ...|++ .+ .++|+++++++++.+|+.+++++|++|+|++++
T Consensus        21 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a   93 (377)
T 3fdb_A           21 YGQGVLPLWVAESD----FSTCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRG   93 (377)
T ss_dssp             SCTTSEECCSSCCC----SCCCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred             cCCCeeeecccCCC----CCCCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHH
Confidence            47899999999853    678999999999998754 347888 77 899999999999888888899999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+++++| |+|+++.|+|.++...++..|.+++.++....    +|++.|++.++++++++++++|+||||.+++
T Consensus        94 ~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~  168 (377)
T 3fdb_A           94 LYIAIDHFTPAQ-SKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFA  168 (377)
T ss_dssp             HHHHHHHHSCTT-CCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCC
T ss_pred             HHHHHHHhcCCC-CEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCC
Confidence            999999999999 99999999999999999999999999987543    8999999999888999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCC-CCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGS-TPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~-~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      .+++++|+++|++||+++|+|++|..+.+++ ..+.++..++..++++++.|+||.+|++|+|+||+++.++       +
T Consensus       169 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-------~  241 (377)
T 3fdb_A          169 PEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNP-------S  241 (377)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSH-------H
T ss_pred             HHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCH-------H
Confidence            9999999999999999999999999998877 5555665554456789999999999999999999988553       4


Q ss_pred             HHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          282 IVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       282 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++.++.... .+.++++++|+++.+.|++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  271 (377)
T 3fdb_A          242 DAEHWQQLSPVIKDGASTLGLIAAEAAYRY  271 (377)
T ss_dssp             HHHHHHHSCHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCCCHHHHHHHHHHHhc
Confidence            7777776643 3568899999998887764

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=100.00  E-value=3.7e-37  Score=283.40  Aligned_cols=253  Identities=21%  Similarity=0.234  Sum_probs=219.8

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHHHHH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCMEAVE  124 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~a~~  124 (311)
                      .+|+|+.|++.   .+++++.+++++.+.+.......|.+..|..++++++++++.+.+|.++++ ++|++|+|+++++.
T Consensus        40 ~~id~~~g~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~  116 (407)
T 3nra_A           40 RPVDFSHGDVD---AHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALF  116 (407)
T ss_dssp             CCEETTSCCTT---TSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred             ceeeecCcCCC---CCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence            48999999865   367889999999998875444468888899999999999999988887766 79999999999999


Q ss_pred             HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC----CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547          125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP----ERGWEVDLEAVEALADENTAAIVIINPCNPCGNV  200 (311)
Q Consensus       125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~  200 (311)
                      .++.+++++| |+|+++.|+|.++...++..|.+++.+++..    .+++.+|++.|++.++++++++++++|+||||.+
T Consensus       117 ~~~~~l~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~  195 (407)
T 3nra_A          117 LAVAATVARG-DKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVV  195 (407)
T ss_dssp             HHHHTTCCTT-CEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCC
T ss_pred             HHHHHhCCCC-CEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcc
Confidence            9999999999 9999999999999999999999999998742    3567899999999998899999999999999999


Q ss_pred             CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC--CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccc
Q 021547          201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG--SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ  278 (311)
Q Consensus       201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~--~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~  278 (311)
                      ++.+++++|+++|++||+++|+|++|+.+.+++..+.++..++  ..++++++.|+||.|+++|+|+||++++.      
T Consensus       196 ~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------  269 (407)
T 3nra_A          196 YSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSR------  269 (407)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECH------
T ss_pred             cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCH------
Confidence            9999999999999999999999999999998877766666653  35578999999999999999999999742      


Q ss_pred             hhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          279 KSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       279 ~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                        ++++.++.... ...++++++|+++.++|++
T Consensus       270 --~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  300 (407)
T 3nra_A          270 --AIIARMEKLQAIVSLRAAGYSQAVLRGWFDE  300 (407)
T ss_dssp             --HHHHHHHHHHHHHTSSSCHHHHGGGGGTTCC
T ss_pred             --HHHHHHHHHHhhhccCCChHHHHHHHHHHhc
Confidence              47777776633 4456788899988887753

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=100.00  E-value=3e-36  Score=277.65  Aligned_cols=281  Identities=19%  Similarity=0.291  Sum_probs=228.8

Q ss_pred             ccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCC
Q 021547            9 WGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPM   86 (311)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~   86 (311)
                      |+..++++.+.   -..+.+++++....+ ++ ..+.++|+|+.|.|..  ...+++.+.+++.+.+...  ... |.+.
T Consensus         3 ~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~~g~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~-y~~~   74 (407)
T 2zc0_A            3 YTKYLAGRANW---IKGSALADVMKKASE-LQ-KKGVKLISLAAGDPDP--ELIPRAVLGEIAKEVLEKEPKSVM-YTPA   74 (407)
T ss_dssp             GGGGSCGGGGG---CCCCHHHHHHHHHHH-HH-HSSCCCEECCSCCCCT--TTSCHHHHHHHHHHHHHHCGGGGS-CCCT
T ss_pred             chhhhhhhhcc---CCchHHHHHHHhhhc-cc-CCCCceEeCCCCCCCc--hhCCHHHHHHHHHHHHhhcccccc-CCCC
Confidence            44445655555   455667777764332 11 1356899999998753  2346789999999888653  234 8888


Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP  166 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  166 (311)
                      .|..++|+++++++.+.+|+++++++|++|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.++.+.
T Consensus        75 ~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~  153 (407)
T 2zc0_A           75 NGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPG-DVVITENPSYINTLLAFEQLGAKIEGVPVDN  153 (407)
T ss_dssp             TCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCHHHHHHHHTTTCEEEEEEEET
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCC-CEEEEeCCChHHHHHHHHHcCCEEEEcccCC
Confidence            899999999999998878877888999999999999999999999999 9999999999999999999999999998753


Q ss_pred             CCCcccCHHHHHhhcC----C--CccEE-EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcc
Q 021547          167 ERGWEVDLEAVEALAD----E--NTAAI-VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM  239 (311)
Q Consensus       167 ~~~~~~d~~~l~~~l~----~--~~~~i-~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~  239 (311)
                      .   ++|++.|++.++    +  +++++ ++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++.++.++
T Consensus       154 ~---~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~  230 (407)
T 2zc0_A          154 D---GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPL  230 (407)
T ss_dssp             T---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCG
T ss_pred             C---CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCCh
Confidence            2   489999999887    5  77887 467899999999999999999999999999999999999988876655566


Q ss_pred             cccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          240 GVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       240 ~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ..++..+++++++|+||.++ +|+|+||++++.        ++++.++.... ...++++++|.++.++|++
T Consensus       231 ~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  293 (407)
T 2zc0_A          231 KALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEG--------EILKKVLMQKQPIDFCAPAISQYIALEYLKR  293 (407)
T ss_dssp             GGGCSSCCEEEEEESTTTTC-TTSCCEEEECCH--------HHHHHHHHHHTTTTSSSCHHHHHHHHHHHHT
T ss_pred             hhcCCCCCEEEEcccccccC-CCcceEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHc
Confidence            66655568999999999998 999999999852        47777776643 3456799999999988864

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=100.00  E-value=2.6e-37  Score=281.71  Aligned_cols=247  Identities=22%  Similarity=0.304  Sum_probs=209.5

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEI  125 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~  125 (311)
                      ++|+|+.|++.    +++++.+.+++.+.+.  ....|++..|..++|+++++++.+.+|..+++++|++|+|+++++..
T Consensus        24 ~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~   97 (376)
T 3ezs_A           24 RGLDLGIGEPQ----FETPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFN   97 (376)
T ss_dssp             CCCBCSSCCCC----SCCCHHHHHHHHTTGG--GGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHH
T ss_pred             CEEEeCCCCCC----CCCCHHHHHHHHHhhh--hcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHH
Confidence            99999999854    5678999999988773  34579988899999999999999888888889999999999999999


Q ss_pred             HHHHHhcC--CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          126 ILTVITRL--GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       126 ~~~~l~~~--g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      ++.+++++  | |+|+++.|+|.++...++..|.+++.+++....++  ++ .+++.+.++++++++++|+||||.+++.
T Consensus        98 ~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~-~l~~~~~~~~~~v~~~~p~nptG~~~~~  173 (376)
T 3ezs_A           98 FPSFVLFDYQN-PTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDF--TP-SLNEKELQEVDLVILNSPNNPTGRTLSL  173 (376)
T ss_dssp             HHHHHTTTCSS-CEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTS--CC-CCCHHHHHHCSEEEECSSCTTTCCCCCH
T ss_pred             HHHHHcCCCCC-CEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCc--ch-hHHhhhccCCCEEEEcCCCCCcCCCCCH
Confidence            99999999  9 99999999999999999999999999988654443  33 5556666688999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-----CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccc
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-----SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ  278 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-----~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~  278 (311)
                      +++++|+++|++||+++|+||+|..+.+++.....+...+     ..++++++.|+||.||++|+|+||++++.      
T Consensus       174 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------  247 (376)
T 3ezs_A          174 EELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDS------  247 (376)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECH------
T ss_pred             HHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCH------
Confidence            9999999999999999999999999988763322222111     35688999999999999999999998742      


Q ss_pred             hhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          279 KSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       279 ~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                        ++++.+..... ..+++++++|+++.+.|++
T Consensus       248 --~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  278 (376)
T 3ezs_A          248 --RLLEKYKAFRAYLGYTSANAIQKASEAAWLD  278 (376)
T ss_dssp             --HHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC
T ss_pred             --HHHHHHHHHHhhhcCCCChHHHHHHHHHHhC
Confidence              47788877644 3567899999999988864

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=100.00  E-value=1.7e-36  Score=277.35  Aligned_cols=253  Identities=19%  Similarity=0.224  Sum_probs=219.1

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .++++|+|+.|++    .+++++.+.+++.+.+.... ..|.+.  ..++++++++++.+.+|+++++++|++|+|++++
T Consensus        25 ~g~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a   97 (391)
T 3dzz_A           25 LKEKELPMWIAEM----DFKIAPEIMASMEEKLKVAA-FGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPA   97 (391)
T ss_dssp             CCTTCEECCSSCC----SSCCCHHHHHHHHHHHTTCC-CCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHH
T ss_pred             cCCCceeccccCC----CCCCCHHHHHHHHHHHhcCc-CCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHH
Confidence            3678999999985    47789999999999987543 367664  6899999999999988888889999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeecc-CCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL-PERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNV  200 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~  200 (311)
                      +.+++.+++++| |+|+++.|+|.++...++..|.+++.++++ ...++.+|++.|++.++ ++++++++++|+||||.+
T Consensus        98 ~~~~~~~l~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~  176 (391)
T 3dzz_A           98 ISAMVRQFTSPG-DQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYA  176 (391)
T ss_dssp             HHHHHHHHSCTT-CEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBC
T ss_pred             HHHHHHHhCCCC-CeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcc
Confidence            999999999999 999999999999999999999999999875 34456799999999997 789999999999999999


Q ss_pred             CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccc
Q 021547          201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ  278 (311)
Q Consensus       201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~  278 (311)
                      ++.+++++|+++|++||+++|+|++|+.+.+.+..+.++..+..  .++++++.|+||.++++|+|+||++++++     
T Consensus       177 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~-----  251 (391)
T 3dzz_A          177 WSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNP-----  251 (391)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSH-----
T ss_pred             cCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCH-----
Confidence            99999999999999999999999999999888766666666653  45789999999999999999999998643     


Q ss_pred             hhhHHHHHhhhhc--cccCCCchhHHHHHhhhhc
Q 021547          279 KSGIVGSIKACLG--VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       279 ~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~  310 (311)
                        ++++.+.....  ..+++++++|+++.+.|++
T Consensus       252 --~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  283 (391)
T 3dzz_A          252 --DLRARAEESFFLAGIGEPNLLAIPAAIAAYEE  283 (391)
T ss_dssp             --HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc
Confidence              47777776632  2357889999988877753

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=100.00  E-value=3.3e-37  Score=284.35  Aligned_cols=253  Identities=20%  Similarity=0.297  Sum_probs=214.7

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~  121 (311)
                      .+.++|+|+.|.+.    ++.++.+.+++.+.+.......|++..|..++|+++++++.+.+|.++++ ++|++|+|+++
T Consensus        45 ~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~  120 (404)
T 2o1b_A           45 GPLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKN  120 (404)
T ss_dssp             CSSCCEECCCCSCS----SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHH
T ss_pred             CCCCEEecCCcCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHH
Confidence            35679999999864    45688999999988754323468887899999999999998878877776 79999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~  201 (311)
                      ++.+++.+++++| |+|+++.|+|.++...++..|.+++.++... +++.+|++.|++.++++++++++++|+||||.++
T Consensus       121 al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~  198 (404)
T 2o1b_A          121 GLVAVPTCVINPG-DYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTA  198 (404)
T ss_dssp             HHHHHHHHHCCTT-CEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCC
T ss_pred             HHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhhccCceEEEEcCCCCCCCccC
Confidence            9999999999999 9999999999999999999999999998754 5667899999988877889999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      +.+++++|+++|+++|++||+||+|..+.+++ .+.++..++ ..++++++.|+||.|+++|+|+||++++.        
T Consensus       199 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------  269 (404)
T 2o1b_A          199 TKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNK--------  269 (404)
T ss_dssp             CHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECH--------
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCH--------
Confidence            99999999999999999999999999988866 333444443 23578999999999999999999998742        


Q ss_pred             hHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          281 GIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       281 ~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++.+..... ...++++++|+++.++|++
T Consensus       270 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  300 (404)
T 2o1b_A          270 DMIQALKKYQTHTNAGMFGALQDAAIYALNH  300 (404)
T ss_dssp             HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhccCCCCHHHHHHHHHHHhc
Confidence            47777776543 3467899999999988764

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=100.00  E-value=9.1e-36  Score=271.15  Aligned_cols=258  Identities=24%  Similarity=0.353  Sum_probs=216.6

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR  102 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~  102 (311)
                      -..+.++++.+...+. ++ .++++|+|+.|.+.    ++.++.+.+++.+.+... ...|++..|..++|+++++++++
T Consensus         9 ~~~~~~~~~~~~~~~~-~~-~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~~~~~   81 (370)
T 2z61_A            9 FESFEVMDILALAQKL-ES-EGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKISELYKD   81 (370)
T ss_dssp             CCCCTTHHHHHHHHHH-HH-TTCCCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHH-Hh-cCCCEEEccCCCCC----CCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHHHHHHHHHHHH
Confidence            4556677766543322 21 36789999999864    455799999999988754 34798888999999999999998


Q ss_pred             cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC
Q 021547          103 DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD  182 (311)
Q Consensus       103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~  182 (311)
                      .+|+.+++++|++|+|+++++.+++.+++++| |+|+++.|+|..+...++..|.+++.++        +|+++|++.++
T Consensus        82 ~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l~~~l~  152 (370)
T 2z61_A           82 KYKADIIPDNIIITGGSSLGLFFALSSIIDDG-DEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESLEEALS  152 (370)
T ss_dssp             HSSCCCCGGGEEEESSHHHHHHHHHHHHCCTT-CEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHHHHHCC
T ss_pred             HhCCCCChhhEEECCChHHHHHHHHHHhcCCC-CEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHHHHhcc
Confidence            88888899999999999999999999999999 9999999999999999999999998886        58999999998


Q ss_pred             CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCC
Q 021547          183 ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVP  261 (311)
Q Consensus       183 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~  261 (311)
                      ++++++++++|+||||.+++.+    |.++|+++|+++|+||+|..+.+++. +.++..++ ..++++++.|+||.++++
T Consensus       153 ~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK~~~~~  227 (370)
T 2z61_A          153 DKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILINGFSKLYAMT  227 (370)
T ss_dssp             SSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEEESTTTTTCG
T ss_pred             cCceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEecChhccCCc
Confidence            8899999999999999999955    99999999999999999999888663 33444443 345789999999999999


Q ss_pred             cceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          262 GWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       262 G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      |+|+||+++++        ++++.++.... ..+++++++|+++.++|+
T Consensus       228 G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  268 (370)
T 2z61_A          228 GWRIGYVISND--------EIIEAILKLQQNLFISAPTISQYAALKAFE  268 (370)
T ss_dssp             GGCCEEEECCH--------HHHHHHHHHHHHHTSSSCHHHHHHHGGGGS
T ss_pred             cceEEEEEECH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHh
Confidence            99999999854        47777776643 345789999999988885

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=2.8e-37  Score=286.53  Aligned_cols=252  Identities=19%  Similarity=0.263  Sum_probs=213.3

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCCCEEEeCChH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNCYAPMFGLPLARRAVAEYLNRDLPYK-LSADDIYITLGCM  120 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~g~~-~~~~~v~~t~g~~  120 (311)
                      ++++|+|+.|.|..  ...+++.+.+++.+.+....  ...|.+..|..++|+++++++.+.+|++ +++++|++|+|++
T Consensus        42 ~~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~  119 (425)
T 1vp4_A           42 DKDAISFGGGVPDP--ETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQ  119 (425)
T ss_dssp             STTCEECCCCSCCG--GGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHH
T ss_pred             CCCceeCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHH
Confidence            56899999998652  23467899999998886431  3478888899999999999998766776 7889999999999


Q ss_pred             HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--------CccEE-EEe
Q 021547          121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--------NTAAI-VII  191 (311)
Q Consensus       121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--------~~~~i-~i~  191 (311)
                      +++.+++.+++++| |+|+++.|+|.++...++..|.+++.++...+   ++|++.|++.+++        +++++ +++
T Consensus       120 ~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~  195 (425)
T 1vp4_A          120 QALDLIGKLFLDDE-SYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMDLNVLERKLSEFDKNGKIKQVKFIYVVS  195 (425)
T ss_dssp             HHHHHHHHHHCCTT-CEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EECHHHHHHHHHHHHHTTCGGGEEEEEEEC
T ss_pred             HHHHHHHHHhCCCC-CEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---CCCHHHHHHHHHhhhhcccCCCceEEEECC
Confidence            99999999999999 99999999999999999999999999987542   4899999998765        67887 478


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      +|+||||.+++.+++++|+++|+++|++||+||+|..+.+++..+.++..++..+++|++.|+||.|+ +|+|+||++++
T Consensus       196 ~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~  274 (425)
T 1vp4_A          196 NFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGS  274 (425)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECC
T ss_pred             CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEeeC
Confidence            99999999999999999999999999999999999999887765555655555568899999999998 99999999985


Q ss_pred             CCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          272 DPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      .        ++++.+..... .+.++|+++|+++.++|++
T Consensus       275 ~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  306 (425)
T 1vp4_A          275 K--------EFIRKIVQAKQSADLCSPAITHRLAARYLER  306 (425)
T ss_dssp             H--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred             H--------HHHHHHHHHhhhhcCCCCHHHHHHHHHHHhc
Confidence            3        47777766533 3456799999999998864

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=100.00  E-value=1.3e-36  Score=279.35  Aligned_cols=251  Identities=18%  Similarity=0.241  Sum_probs=213.9

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE  124 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~  124 (311)
                      +++|+|+.|++.    +++++.+.+++.+.+... ...|++.  ..++|+++++++++.+|+++++++|++|+|+++++.
T Consensus        31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~  103 (399)
T 1c7n_A           31 NEVVPLSVADME----FKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF  103 (399)
T ss_dssp             TTCCCCCSSSCS----SCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred             CCceeeeecCCC----CCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHH
Confidence            589999999853    567899999999988643 3467764  899999999999887787788899999999999999


Q ss_pred             HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC-CcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCC
Q 021547          125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER-GWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~  202 (311)
                      +++.+++++| |+|+++.|+|.++...++..|.+++.++....+ ++.+|++.|++.++ ++++++++++|+||||.+++
T Consensus       104 ~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~  182 (399)
T 1c7n_A          104 NAVREFTKPG-DGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWK  182 (399)
T ss_dssp             HHHHHHCCTT-CEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCC
T ss_pred             HHHHHhcCCC-CEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcC
Confidence            9999999999 999999999999999999999999999875332 46789999999887 68899999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      .+++++|+++|++||+++|+||+|..+.+++..+.++..++.  .++++++.|+||.++++|+|+||++++++       
T Consensus       183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------  255 (399)
T 1c7n_A          183 KDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNP-------  255 (399)
T ss_dssp             HHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH-------
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCH-------
Confidence            999999999999999999999999999887765556665543  45789999999999999999999998643       


Q ss_pred             hHHHHHhhhhc-cc-cCCCchhHHHHHhhhhc
Q 021547          281 GIVGSIKACLG-VR-SGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       281 ~~~~~~~~~~~-~~-~~~~~~~q~~~~~~l~~  310 (311)
                      +++++++.... .+ .++++++|+++.++|++
T Consensus       256 ~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~  287 (399)
T 1c7n_A          256 DIRERFTKSRDATSGMPFTTLGYKACEICYKE  287 (399)
T ss_dssp             HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhC
Confidence            36777766543 22 36799999998887753

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=100.00  E-value=1.2e-35  Score=277.26  Aligned_cols=256  Identities=20%  Similarity=0.240  Sum_probs=208.9

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS----SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~----~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      .+++++|+|+.|++.    ++.++.+.+++.+.+..    .....|.+..|..++|+++++++.  +|+++.+++|++|+
T Consensus        66 ~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~t~  139 (449)
T 3qgu_A           66 NPDAKIISLGIGDTT----EPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFISD  139 (449)
T ss_dssp             CTTCCCEECSSCCCC----CCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEEES
T ss_pred             CCCCCEEEeeCCCCC----CCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEEcc
Confidence            457899999999854    67899999999998873    344579888899999999999998  78888899999999


Q ss_pred             ChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcE----------EEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547          118 GCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIE----------VRHFDLLPERGWEVDLEAVEALADENTAA  187 (311)
Q Consensus       118 g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~----------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  187 (311)
                      |+++++..+ ..++++| |+|+++.|+|.++...++..|.+          ++.+++...+++..+++++     +++++
T Consensus       140 G~~~al~~~-~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~  212 (449)
T 3qgu_A          140 GSKCDIARI-QMMFGSK-PTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDI  212 (449)
T ss_dssp             CHHHHHHHH-HHHHCSS-SCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----CCCSE
T ss_pred             CHHHHHHHH-HHHhCCC-CEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc-----CCCCE
Confidence            999999998 8888999 99999999999999999999998          9999886555555554432     57899


Q ss_pred             EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceee
Q 021547          188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFG  266 (311)
Q Consensus       188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G  266 (311)
                      +++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.++..++. .+++|++.|+||.|+++|+|+|
T Consensus       213 v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G  292 (449)
T 3qgu_A          213 IFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLG  292 (449)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCE
T ss_pred             EEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeE
Confidence            999999999999999999999999999999999999999999887755556666654 4578999999999999999999


Q ss_pred             EEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547          267 WLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       267 ~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~  310 (311)
                      |++++..........+...+.... ....++++++|+++.+++++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  337 (449)
T 3qgu_A          293 WTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQP  337 (449)
T ss_dssp             EEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSH
T ss_pred             EEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhh
Confidence            999865321100011222343332 23447899999999888764

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=100.00  E-value=4.6e-37  Score=284.29  Aligned_cols=290  Identities=14%  Similarity=0.105  Sum_probs=221.3

Q ss_pred             ccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC
Q 021547            9 WGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF   87 (311)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~   87 (311)
                      |...++++...   ..++.++.+.....+...+.++.++|+|+.|.| +..+.+++++.+.+++.+..... ...|.+..
T Consensus         5 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~   80 (418)
T 3rq1_A            5 TSVAAKHAKGK---KLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSE-HVGYAPIA   80 (418)
T ss_dssp             CCCSCTTTTTC---CCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHH-HHSCCCTT
T ss_pred             hhhhHhhcCCC---CCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcccc-cCCCCCCC
Confidence            33334444444   556667777665544433335678999999986 11235778899988887644322 23799888


Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE  167 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~  167 (311)
                      |.+++|+++++++....+.. ..++|++|+|+++++..++.+++++| |+|+++.|+|.+|...++..|.+++.+++.++
T Consensus        81 g~~~lr~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~  158 (418)
T 3rq1_A           81 GIPDFLCAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPG-DEVLTADWYWGAYRVICSDTGRTLVTYSLFDE  158 (418)
T ss_dssp             CCHHHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTT-CEEEEESSCCTHHHHHHHHTTCEEEEECSBCT
T ss_pred             ChHHHHHHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCC-CEEEECCCCchhHHHHHHHcCCEEEEEeeeCC
Confidence            99999999999997755422 13389999999999999999999999 99999999999999999999999999987544


Q ss_pred             CCcccCHHHHHhhcCC----Ccc-EEEEeCC-CCCCccCCCHHHHHHHHHHHH------HhCCEEEEeccccCCccCCCC
Q 021547          168 RGWEVDLEAVEALADE----NTA-AIVIINP-CNPCGNVLTYQHLQKIAETAR------KLGILVIADEVYGHLAFGSTP  235 (311)
Q Consensus       168 ~~~~~d~~~l~~~l~~----~~~-~i~i~~p-~nptG~~~~~~~l~~l~~l~~------~~~~~li~D~ay~~~~~~~~~  235 (311)
                      + +.+|++.|++.+++    +++ ++++++| +||||.+++.+++++|+++|+      +||++||+||+|.++.+++..
T Consensus       159 ~-~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~  237 (418)
T 3rq1_A          159 H-NNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDE  237 (418)
T ss_dssp             T-SSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHH
T ss_pred             C-CCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHH
Confidence            3 78999999998874    566 7888899 999999999999999999999      899999999999998876543


Q ss_pred             CCccc-ccCC-CCC--eEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-----cccCCCchhHHHHHh
Q 021547          236 YIPMG-VFGS-IVP--VITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-----VRSGPSTLIQVCEMF  306 (311)
Q Consensus       236 ~~~~~-~~~~-~~~--~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~q~~~~~  306 (311)
                      ..++. .... .++  +|+++|+||.|+++|+|+||+++....     +++++.+.....     ...+++.++|.++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  312 (418)
T 3rq1_A          238 VRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDD-----EEIADEFFEVNKSTSRATWSNICRPAMRTMAN  312 (418)
T ss_dssp             HHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESS-----HHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCC-----HHHHHHHHHHHHHHHhhccCCCchHHHHHHHH
Confidence            22221 2221 223  689999999999999999999973111     246776665432     124688999999988


Q ss_pred             hhhc
Q 021547          307 LLVN  310 (311)
Q Consensus       307 ~l~~  310 (311)
                      +|++
T Consensus       313 ~l~~  316 (418)
T 3rq1_A          313 IVAD  316 (418)
T ss_dssp             HHTC
T ss_pred             HhCC
Confidence            8764

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=100.00  E-value=5.5e-36  Score=274.02  Aligned_cols=252  Identities=18%  Similarity=0.289  Sum_probs=218.3

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .++++|+|+.|++    .+++++.+.+++.+.+.... ..|.+  +..++++++++++.+.+|..+++++|++|+|++++
T Consensus        30 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a  102 (391)
T 4dq6_A           30 GTNDLLPMWVADM----DFKAAPCIIDSLKNRLEQEI-YGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPA  102 (391)
T ss_dssp             SCSCSEECCSSSC----SSCCCHHHHHHHHHHHTTCC-CCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred             CCCCceeccccCC----CCCCCHHHHHHHHHHHhCCC-CCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHH
Confidence            3689999999985    36789999999999987533 35655  66999999999999988888889999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeecc--CCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL--PERGWEVDLEAVEALADENTAAIVIINPCNPCGNV  200 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~  200 (311)
                      +.+++.+++++| |+|+++.|+|.++...++..|.+++.+++.  ...++.+|++++++.+++ ++++++++|+||||.+
T Consensus       103 ~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~  180 (391)
T 4dq6_A          103 ISLLINELTKAN-DKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRV  180 (391)
T ss_dssp             HHHHHHHHSCTT-CEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBC
T ss_pred             HHHHHHHhCCCC-CEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcC
Confidence            999999999999 999999999999999999999999999986  345678999999999988 9999999999999999


Q ss_pred             CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccc
Q 021547          201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ  278 (311)
Q Consensus       201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~  278 (311)
                      ++.+++++|+++|++||+++|+|++|..+.+++..+.++..+..  .++++++.|+||.++++|+|+||++++++     
T Consensus       181 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-----  255 (391)
T 4dq6_A          181 WTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDE-----  255 (391)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSH-----
T ss_pred             cCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCH-----
Confidence            99999999999999999999999999999988776666666654  36889999999999999999999998653     


Q ss_pred             hhhHHHHHhhhhc--cccCCCchhHHHHHhhhhc
Q 021547          279 KSGIVGSIKACLG--VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       279 ~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~  310 (311)
                        ++++.+.....  ...++++++|+++...+++
T Consensus       256 --~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  287 (391)
T 4dq6_A          256 --KDYKLLDDAFTRIDIKRNNCFSLVATEASYNN  287 (391)
T ss_dssp             --HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc
Confidence              36777766532  2347888999988877753

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=7.9e-36  Score=275.38  Aligned_cols=273  Identities=25%  Similarity=0.361  Sum_probs=221.1

Q ss_pred             hHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHH
Q 021547           14 KQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLAR   93 (311)
Q Consensus        14 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr   93 (311)
                      +.+.+.   ...+.++++.....+ +.+ .++++|+|+.|.+.    ++.++.+.+++ +.+... ...|++..|..++|
T Consensus        17 ~~~~~~---~~~~~~~~~~~~~~~-~~~-~g~~~i~l~~~~~~----~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l~   85 (409)
T 2gb3_A           17 SDRVLL---TEESPIRKLVPFAEM-AKK-RGVRIHHLNIGQPD----LKTPEVFFERI-YENKPE-VVYYSHSAGIWELR   85 (409)
T ss_dssp             CHHHHS---CCCCTTGGGHHHHHH-HHH-TTCEEEECSSCCCC----SCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHHH
T ss_pred             HHHhhc---CCccHHHHHHHHHHH-HHh-cCCCEEeccCCCCC----CCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHHH
Confidence            444444   444445555443222 111 36889999999864    45678899999 887543 34788888999999


Q ss_pred             HHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccC
Q 021547           94 RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVD  173 (311)
Q Consensus        94 ~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  173 (311)
                      +++++++...+|+++++++|++|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.++....+++.+ 
T Consensus        86 ~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-  163 (409)
T 2gb3_A           86 EAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPG-DEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-  163 (409)
T ss_dssp             HHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCC-CEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-
Confidence            99999999888888888999999999999999999999999 9999999999999999999999999998764345555 


Q ss_pred             HHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcc-cccCCCCCeEEEe
Q 021547          174 LEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM-GVFGSIVPVITLG  252 (311)
Q Consensus       174 ~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~-~~~~~~~~~i~i~  252 (311)
                      ++.|++.++++++++++++|+||||.+++.+++++|+++|+++|++||+|++|+.+.+++. +.++ ..+  .++++++.
T Consensus       164 ~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~-~~~~~~~~--~~~~i~~~  240 (409)
T 2gb3_A          164 PQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASALSIE--SDKVVVID  240 (409)
T ss_dssp             CTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCGGGSC--CTTEEEEE
T ss_pred             HHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCC-CCCccccC--CCCEEEEe
Confidence            8899999988899999999999999999999999999999999999999999999887663 3332 211  34689999


Q ss_pred             cCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          253 SISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       253 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      |+||.++++|+|+||++++++       ++++.++.... .. ++++++|+++.++|+.
T Consensus       241 s~sK~~g~~G~r~G~~~~~~~-------~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~  291 (409)
T 2gb3_A          241 SVSKKFSACGARVGCLITRNE-------ELISHAMKLAQGRL-APPLLEQIGSVGLLNL  291 (409)
T ss_dssp             ESTTTTTCGGGCCEEEECSCH-------HHHHHHHHHHHHSC-CCCHHHHHHHHHHHTC
T ss_pred             cchhccCCccceEEEEEECcH-------HHHHHHHHHHhccC-CCCHHHHHHHHHHHhc
Confidence            999999999999999998642       36777766533 23 7899999999888853

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=100.00  E-value=1e-35  Score=272.68  Aligned_cols=250  Identities=19%  Similarity=0.269  Sum_probs=209.2

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH-HHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPL-ARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~-lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .+++|+|+.|++.    +++++.+.+++.+.+... ...|++.  ..+ +|+++++++++.+|+.+++++|++|+|++++
T Consensus        27 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~a   99 (390)
T 1d2f_A           27 TADLLPFTISDMD----FATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYM   99 (390)
T ss_dssp             ---CEECCSSSCS----SCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHH
T ss_pred             CCCeeEeeecCCC----CCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHH
Confidence            3579999999853    568899999999988643 3468764  678 9999999999888888889999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC-CcccCHHHHHhhcCC-CccEEEEeCCCCCCccC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER-GWEVDLEAVEALADE-NTAAIVIINPCNPCGNV  200 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~  200 (311)
                      +.+++.+++++| |+|+++.|+|.++...++..|.+++.++...++ ++.+|++.|++.+++ +++++++++|+||||.+
T Consensus       100 l~~~~~~l~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~  178 (390)
T 1d2f_A          100 VSELIRQWSETG-EGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKV  178 (390)
T ss_dssp             HHHHHHHSSCTT-CEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCC
T ss_pred             HHHHHHHhcCCC-CEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcC
Confidence            999999999999 999999999999999999999999999876543 467999999999876 78999999999999999


Q ss_pred             CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      ++.+++++|+++|+++|+++|+||+|..+.++|..+.++..++....-+ +.|+||.|+++|+|+||++++++       
T Consensus       179 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~-------  250 (390)
T 1d2f_A          179 WTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENS-------  250 (390)
T ss_dssp             CCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSH-------
T ss_pred             cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCH-------
Confidence            9999999999999999999999999999988776666665554321013 99999999999999999998643       


Q ss_pred             hHHHHHhhhhc--cc-cCCCchhHHHHHhhhh
Q 021547          281 GIVGSIKACLG--VR-SGPSTLIQVCEMFLLV  309 (311)
Q Consensus       281 ~~~~~~~~~~~--~~-~~~~~~~q~~~~~~l~  309 (311)
                      ++++.+.....  .. +++++++|+++.+.|+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  282 (390)
T 1d2f_A          251 SSRDAYLSALKGRDGLSSPSVLALTAHIAAYQ  282 (390)
T ss_dssp             HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcccCCCCHHHHHHHHHHHh
Confidence            36777766532  33 3788999988887775

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=100.00  E-value=3.7e-36  Score=275.93  Aligned_cols=263  Identities=19%  Similarity=0.174  Sum_probs=206.1

Q ss_pred             CCCeeecCCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE--eCChH
Q 021547           44 PRPVIPLGHGDPA-AFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI--TLGCM  120 (311)
Q Consensus        44 ~~~~i~~~~g~p~-~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~--t~g~~  120 (311)
                      ++++|+|+.|.+. .....++++.+.+++.+.+......+|.+..|..++|+++++++....+..+++++|++  |+|++
T Consensus        25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~  104 (396)
T 2q7w_A           25 RPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGT  104 (396)
T ss_dssp             ---CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHH
T ss_pred             CCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccch
Confidence            5789999999742 11234677999999998876544558988889999999999999764443346789998  99999


Q ss_pred             HHHHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCCC
Q 021547          121 EAVEIILTVIT--RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPCN  195 (311)
Q Consensus       121 ~a~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~n  195 (311)
                      +++++++.++.  .+| |+|+++.|+|.++...++..|.+++.++....+++.+|++.+++.+++   +++++++++|+|
T Consensus       105 ~a~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~n  183 (396)
T 2q7w_A          105 GALRVAADFLAKNTSV-KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHN  183 (396)
T ss_dssp             HHHHHHHHHHHHHSCC-CEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCT
T ss_pred             hhHHHHHHHHHHhCCC-CEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence            99999998774  589 999999999999999999999999999876546688999999998864   367788899999


Q ss_pred             CCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC-CCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEe--e
Q 021547          196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS-TPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLAT--N  271 (311)
Q Consensus       196 ptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~-~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~--~  271 (311)
                      |||.+++.+++++|+++|+++|+++|+||+|..+.+++ ....++..++. .+++++++|+||.|+++|+|+||+++  +
T Consensus       184 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~  263 (396)
T 2q7w_A          184 PTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAA  263 (396)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECS
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcC
Confidence            99999999999999999999999999999999988753 12223332322 34789999999999999999999997  3


Q ss_pred             CCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547          272 DPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++ ..  .++++.+.... ....++++++|+++.++|++
T Consensus       264 ~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  300 (396)
T 2q7w_A          264 DSE-TV--DRAFSQMKAAIRANYSNPPAHGASVVATILSN  300 (396)
T ss_dssp             SHH-HH--HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTS
T ss_pred             CHH-HH--HHHHHHHHHHHhhccCCCCcHHHHHHHHHhcC
Confidence            321 00  12555555432 33345699999999988764

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=100.00  E-value=1.9e-35  Score=270.16  Aligned_cols=242  Identities=26%  Similarity=0.371  Sum_probs=205.7

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE  124 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~  124 (311)
                      +++|+|+.|.|.    ++.++.+.+++.+.+..  ...|.+..|..++|+++++++      ++++++|++|+|+++++.
T Consensus        25 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~------~~~~~~v~~~~g~~~a~~   92 (381)
T 1v2d_A           25 LGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALAEEF------AVEPESVVVTSGATEALY   92 (381)
T ss_dssp             HTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHHHHH------TSCGGGEEEESSHHHHHH
T ss_pred             CCeEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHHHHhc------CCChhhEEEcCChHHHHH
Confidence            468999999864    56789999999998865  447988789999999999997      346778999999999999


Q ss_pred             HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC-CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP-ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      +++.+++++| |+|+++.|+|..+...++..|.+++.++... ..++.+|+++|++.++++++++++++|+||||.+++.
T Consensus        93 ~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~  171 (381)
T 1v2d_A           93 VLLQSLVGPG-DEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGE  171 (381)
T ss_dssp             HHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHhCCCC-CEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCH
Confidence            9999999999 9999999999999999999999999998751 1347899999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV  283 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  283 (311)
                      +++++|+++|++||+++|+|++|..+.+ |....++..+ ..++++++.|+||.|+++|+|+||++++.        +++
T Consensus       172 ~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~~~~s~sK~~~~~G~r~G~~~~~~--------~~~  241 (381)
T 1v2d_A          172 RELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTFTVGSAGKRLEATGYRVGWIVGPK--------EFM  241 (381)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEEEEEEHHHHTTCGGGCCEEEECCT--------TTH
T ss_pred             HHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEEEEeechhhcCCcccceEEEEeCH--------HHH
Confidence            9999999999999999999999999877 4444444433 34578999999999999999999999853        256


Q ss_pred             HHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          284 GSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       284 ~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      +.++.... ..+++++++|+++.++|+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~a~~~~l~  268 (381)
T 1v2d_A          242 PRLAGMRQWTSFSAPTPLQAGVAEALK  268 (381)
T ss_dssp             HHHHHHHHHHTSSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhhcccCCCcHHHHHHHHHHh
Confidence            66655432 345778999999888875

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=100.00  E-value=2.4e-36  Score=278.71  Aligned_cols=276  Identities=16%  Similarity=0.126  Sum_probs=206.9

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR  102 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~  102 (311)
                      ..++.++.+++.+.+.    ..+++|+|+.|+|.   .++.++.+.+++.++. .....+|.+..|..++|+++++++..
T Consensus        23 ~~~~~i~~~~~~~~~~----~~~~~i~l~~g~~~---d~~~~~~v~~a~~~a~-~~~~~~y~~~~g~~~lr~~ia~~~~~   94 (409)
T 4eu1_A           23 GKPDPILGLGQDFRMD----PAKRKVNLSIGVYR---DDADQPFVLECVKQAT-LGTNMDYAPVTGIASFVEEAQKLCFG   94 (409)
T ss_dssp             ----CHHHHHHHHHHC----CCSSCEECCCSSCC---CTTSCCCCCHHHHTCC-CCSCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred             CCCChHHHHHHHHhhC----CCcCceeeeeeEEE---CCCCCEeecHHHHhcC-ccccccCCCCCCcHHHHHHHHHHHcC
Confidence            4556677777654332    46789999999972   2344455666666553 33455899889999999999999954


Q ss_pred             cCCCCCCCCCEE--EeCChHHHHHHHHH---HHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHH
Q 021547          103 DLPYKLSADDIY--ITLGCMEAVEIILT---VITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV  177 (311)
Q Consensus       103 ~~g~~~~~~~v~--~t~g~~~a~~~~~~---~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  177 (311)
                      ..+..+++++|.  .|.|+++++.++..   +++++| |+|+++.|+|.++...++..|.+++.+++...+++.+|++.+
T Consensus        95 ~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  173 (409)
T 4eu1_A           95 PTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANC-NRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGM  173 (409)
T ss_dssp             SSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSC-CEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHH
T ss_pred             CCchhhccCceeeeecccchHHHHHHHHHHHHhcCCC-CEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHH
Confidence            322222367884  49999999987644   455789 999999999999999999999999999986567789999999


Q ss_pred             HhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC--CCCccccc-CCCCCeEEE
Q 021547          178 EALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST--PYIPMGVF-GSIVPVITL  251 (311)
Q Consensus       178 ~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~--~~~~~~~~-~~~~~~i~i  251 (311)
                      ++.++   ++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++.  ...++..+ +..+++|++
T Consensus       174 ~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~  253 (409)
T 4eu1_A          174 LECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVA  253 (409)
T ss_dssp             HHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEE
T ss_pred             HHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEE
Confidence            99885   3456667799999999999999999999999999999999999999888652  11222222 345578999


Q ss_pred             ecCcccCCCCcceeeEE--EeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547          252 GSISKRWIVPGWRFGWL--ATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       252 ~s~sK~~~~~G~r~G~i--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +|+||.|+++|+|+||+  ++++++ .  .+.+++.++... ....++++++|.+++.+|++
T Consensus       254 ~S~SK~~g~~G~riG~~~~v~~~~~-~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  312 (409)
T 4eu1_A          254 QSFSKNFGLYGHRCGALHISTASAE-E--AKRLVSQLALLIRPMYNNPPLYGAWVVSSILKD  312 (409)
T ss_dssp             EECTTTSSCGGGCCEEEEEECSSHH-H--HHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHC
T ss_pred             ecCcccccCccCCceEEEEEeCCHH-H--HHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCC
Confidence            99999999999999997  655421 0  011556666553 33567789999999988764

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=100.00  E-value=7.3e-36  Score=277.11  Aligned_cols=252  Identities=19%  Similarity=0.327  Sum_probs=205.9

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc----------CCCCCCCCCCCcHHHHHHHHHHHhhcCCCC--CCCCC
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS----------SMFNCYAPMFGLPLARRAVAEYLNRDLPYK--LSADD  112 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~--~~~~~  112 (311)
                      ..+|+|+.+...    ++ ++.+.+++.+....          .....|+++.|..++|+++++++++.+|..  +++++
T Consensus        36 ~~~i~l~~~~~~----~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~  110 (428)
T 1iay_A           36 NGVIQMGLAENQ----LC-LDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPER  110 (428)
T ss_dssp             TSBEECSSCCCC----SS-HHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred             Cceeeeccccch----hh-HHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence            578999987532    23 45788887753210          013478888899999999999999888865  77899


Q ss_pred             EEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH-HHcCcEEEEeeccCCCCcccCHHHHHhhcCC------Cc
Q 021547          113 IYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA-KRNHIEVRHFDLLPERGWEVDLEAVEALADE------NT  185 (311)
Q Consensus       113 v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~  185 (311)
                      |++|+|+++++.+++.+++++| |+|+++.|+|..+...+ ...|.+++.++...++++.+|++.+++.+++      ++
T Consensus       111 i~~~~G~~~ai~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~  189 (428)
T 1iay_A          111 VVMAGGATGANETIIFCLADPG-DAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKV  189 (428)
T ss_dssp             CEEEEHHHHHHHHHHHHHCCTT-CEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCE
T ss_pred             EEEccChHHHHHHHHHHhCCCC-CeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCce
Confidence            9999999999999999999999 99999999999987644 4689999999875555678999999988753      68


Q ss_pred             cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--------CCCeEEEecCccc
Q 021547          186 AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--------IVPVITLGSISKR  257 (311)
Q Consensus       186 ~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--------~~~~i~i~s~sK~  257 (311)
                      +++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.|++..+.++..+..        .++++++.|+||.
T Consensus       190 ~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~  269 (428)
T 1iay_A          190 KGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKD  269 (428)
T ss_dssp             EEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTT
T ss_pred             EEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhh
Confidence            89999999999999999999999999999999999999999998886654444433332        3578999999999


Q ss_pred             CCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       258 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      |+++|+|+||++++++       ++++.++.... .+++|+++|+++.++|++
T Consensus       270 ~g~~Glr~G~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~  314 (428)
T 1iay_A          270 MGLPGFRVGIIYSFND-------DVVNCARKMSS-FGLVSTQTQYFLAAMLSD  314 (428)
T ss_dssp             SSCGGGCEEEEEESCH-------HHHHHHHHHHT-TSCCCHHHHHHHHHHTTC
T ss_pred             cCCCCceEEEEEeCCH-------HHHHHHHHHHh-cccCCHHHHHHHHHHhcC
Confidence            9999999999998543       37777776544 356899999999998865

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=100.00  E-value=1.3e-35  Score=273.99  Aligned_cols=281  Identities=16%  Similarity=0.152  Sum_probs=217.8

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCcHHHHHHHHHHH
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSVRS-SMFNCYAPMFGLPLARRAVAEYL  100 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~~~-~~~~~Y~~~~g~~~lr~~ia~~l  100 (311)
                      ...+.+++++....+    ..++++|+|+.|.| +.....++++.+.+++.+.+.. ....+|.+..|..++|+++++++
T Consensus        12 ~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~   87 (412)
T 1ajs_A           12 AQPVLVFKLIADFRE----DPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLA   87 (412)
T ss_dssp             CCCCHHHHHHHHHHT----CCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHH
T ss_pred             cCCchHHHHHHHHhh----cCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHH
Confidence            445677777765432    24688999999986 3222245679999999988732 24557988889999999999999


Q ss_pred             hhcCCCCCCCCCEEE--eCChHHHHHHHHH--HHhcCCC----CEEEecCCCCcchHHHHHHcCcE-EEEeeccCCCCcc
Q 021547          101 NRDLPYKLSADDIYI--TLGCMEAVEIILT--VITRLGA----ANILLPRPGWPFYESFAKRNHIE-VRHFDLLPERGWE  171 (311)
Q Consensus       101 ~~~~g~~~~~~~v~~--t~g~~~a~~~~~~--~l~~~g~----d~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~  171 (311)
                      ...+|..+++++|++  |+|+++++++++.  .++.+|.    |+|+++.|+|.++...++..|.+ ++.++...++++.
T Consensus        88 ~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  167 (412)
T 1ajs_A           88 LGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRG  167 (412)
T ss_dssp             HCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTE
T ss_pred             hcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCc
Confidence            766666567889999  9999999999864  4445553    78999999999999999999999 9999875556788


Q ss_pred             cCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC--CCCCcccccC-CC
Q 021547          172 VDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS--TPYIPMGVFG-SI  245 (311)
Q Consensus       172 ~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~--~~~~~~~~~~-~~  245 (311)
                      +|++.+++.+++   +++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++  ..+.++..+. ..
T Consensus       168 ~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~  247 (412)
T 1ajs_A          168 LDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEG  247 (412)
T ss_dssp             ECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred             cCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccC
Confidence            999999998764   66778889999999999999999999999999999999999999988765  1222333232 24


Q ss_pred             CCeEEEecCcccCCCCcceeeEEEee--CCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547          246 VPVITLGSISKRWIVPGWRFGWLATN--DPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       246 ~~~i~i~s~sK~~~~~G~r~G~i~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++|++.|+||.|+++|+|+||+++.  +++ ..  ..+++.+.... ....++++++|+++.++|++
T Consensus       248 ~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  312 (412)
T 1ajs_A          248 FELFCAQSFSKNFGLYNERVGNLTVVAKEPD-SI--LRVLSQMQKIVRVTWSNPPAQGARIVARTLSD  312 (412)
T ss_dssp             CCEEEEEECTTTSCCGGGCEEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHS
T ss_pred             CcEEEEEecccccCCCCcceEEEEEecCCHH-HH--HHHHHHHHHHHhcccCCCChHHHHHHHHHHcC
Confidence            57899999999999999999999983  221 00  11455555532 33345699999999988864

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=100.00  E-value=1.7e-35  Score=274.15  Aligned_cols=251  Identities=19%  Similarity=0.249  Sum_probs=218.8

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      ++++|+|+.|++    .++++|.+.+++.+.+.... ..|...  ..++++++++++.+.+|+++.+++|++|+|+++|+
T Consensus        60 g~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~  132 (421)
T 3l8a_A           60 NPELLQMWVADM----DFLPVPEIKEAIINYGREHI-FGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAI  132 (421)
T ss_dssp             CTTCEECCSSCC----CSCCCHHHHHHHHHHHHHCC-SSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred             CCCeeecccCCC----CCCCCHHHHHHHHHHHhcCC-cCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHH
Confidence            678999999984    47789999999999987543 367653  38999999999999889888899999999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeecc-CCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCC
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLL-PERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~  201 (311)
                      +.++.++.++| |+|+++.|+|.++...++..|.+++.+++. ...++.+|++.|++.++ ++++++++++|+||||.++
T Consensus       133 ~~a~~~~~~~g-d~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~  211 (421)
T 3l8a_A          133 SIALQAFSEKG-DAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVW  211 (421)
T ss_dssp             HHHHHHHSCTE-EEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCC
T ss_pred             HHHHHHhcCCC-CEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcC
Confidence            99999999999 999999999999999999999999999986 45567899999999987 7899999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK  279 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~  279 (311)
                      +.+++++|.++|++||+++|+||+|..+.++|..+.++..+..  .++++++.|+||.|+++|+|+||++++++      
T Consensus       212 ~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~------  285 (421)
T 3l8a_A          212 DNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNE------  285 (421)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSH------
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCH------
Confidence            9999999999999999999999999999998877777766654  46789999999999999999999998753      


Q ss_pred             hhHHHHHhhhh-c-cccCCCchhHHHHHhhhh
Q 021547          280 SGIVGSIKACL-G-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       280 ~~~~~~~~~~~-~-~~~~~~~~~q~~~~~~l~  309 (311)
                       ++++.+.... . ...++++++|+++.+.++
T Consensus       286 -~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~  316 (421)
T 3l8a_A          286 -SLRRKFQYRQLANNQHEVPTVGMIATQAAFQ  316 (421)
T ss_dssp             -HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHhcccCCCCHHHHHHHHHHHh
Confidence             3777776653 2 234789999999888775

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=100.00  E-value=5e-36  Score=276.79  Aligned_cols=278  Identities=15%  Similarity=0.113  Sum_probs=213.6

Q ss_pred             hhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547           25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVD-SVRSSMFNCYAPMFGLPLARRAVAEYLNR  102 (311)
Q Consensus        25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~  102 (311)
                      .+.++.+...+.+.    .++++|+|+.|.| +..+..++++.+.+++.+ .+..+...+|.+..|..++|+++++++..
T Consensus        13 ~~~~~~~~~~~~~~----~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~   88 (412)
T 1yaa_A           13 PDALFGIKQRYGQD----QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFG   88 (412)
T ss_dssp             CCTTHHHHHHHHTC----CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred             CCcHHHHHHHHhcC----CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhc
Confidence            45566666543222    4678999999986 322334678999999999 87644455798888999999999999977


Q ss_pred             cCCCCCCCCCEEE--eCChHHHHHHHH--HHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHH
Q 021547          103 DLPYKLSADDIYI--TLGCMEAVEIIL--TVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVE  178 (311)
Q Consensus       103 ~~g~~~~~~~v~~--t~g~~~a~~~~~--~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~  178 (311)
                      .+|+.+++++|++  |+|+++++.+++  ..++.+| |+|+++.|+|.++...++..|.+++.++....+++.+|++.++
T Consensus        89 ~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~  167 (412)
T 1yaa_A           89 TQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPD-KLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFL  167 (412)
T ss_dssp             TTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTT-CCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHH
T ss_pred             CCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCC-CEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHH
Confidence            6666667889999  999999999884  3444689 9999999999999999999999999998733346789999999


Q ss_pred             hhcCCC---ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCC--CCCCcccccC-CCC---CeE
Q 021547          179 ALADEN---TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS--TPYIPMGVFG-SIV---PVI  249 (311)
Q Consensus       179 ~~l~~~---~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~--~~~~~~~~~~-~~~---~~i  249 (311)
                      +.++++   +.++++++|+||||.+++.+++++|+++|+++|+++|+|++|+.+.+++  ....++..+. ...   ++|
T Consensus       168 ~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  247 (412)
T 1yaa_A          168 NAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVF  247 (412)
T ss_dssp             HHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEE
T ss_pred             HHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceE
Confidence            987643   3445559999999999999999999999999999999999999988764  1222232221 123   789


Q ss_pred             EEecCcccCCCCcceeeEEE--e-e---CCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547          250 TLGSISKRWIVPGWRFGWLA--T-N---DPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       250 ~i~s~sK~~~~~G~r~G~i~--~-~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++|+||.|+.+|+|+||++  + +   +++ .  ...+++++... .....++++++|+++.++|++
T Consensus       248 ~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~-~--~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  312 (412)
T 1yaa_A          248 VCQSFAKNAGMYGERVGCFHLALTKQAQNKT-I--KPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLET  312 (412)
T ss_dssp             EEEECTTTSCCGGGCEEEEEEECCSCTTHHH-H--HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHS
T ss_pred             EEeccCCCCCCcCCcceEEEEEecCCCCCHH-H--HHHHHHHHHHHHhhccCCCChHHHHHHHHHhCC
Confidence            99999999998899999998  5 1   210 0  01266777764 333456689999999988864

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=100.00  E-value=5.8e-35  Score=271.39  Aligned_cols=269  Identities=20%  Similarity=0.246  Sum_probs=207.8

Q ss_pred             hHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547           27 AFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS----SMFNCYAPMFGLPLARRAVAEYLNR  102 (311)
Q Consensus        27 ~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~----~~~~~Y~~~~g~~~lr~~ia~~l~~  102 (311)
                      .++++.++......+.+++++|+|+.|++.    ++.++.+.+++.+.+..    .....|.+..|..++|+++++++.+
T Consensus        38 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~  113 (432)
T 3ei9_A           38 LFPEIARRRSAHLLKYPDAQVISLGIGDTT----EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG  113 (432)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCCEECSSCCCC----SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHhhhhcCCCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc
Confidence            344444444444444457799999999854    68899999999998863    2344788888999999999999974


Q ss_pred             cCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCc------------EEEEeeccCCCCc
Q 021547          103 DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHI------------EVRHFDLLPERGW  170 (311)
Q Consensus       103 ~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~~~~~  170 (311)
                        ++++.+++|++|+|+++++.++ ..++++| |.|+++.|+|.++...++..|.            +++.+++....++
T Consensus       114 --~~~~~~~~i~~t~G~~~al~~l-~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (432)
T 3ei9_A          114 --GLGIGDDDVFVSDGAKCDISRL-QVMFGSN-VTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGF  189 (432)
T ss_dssp             --TTTCCGGGEEEESCHHHHHHHH-HHHHCTT-CCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTT
T ss_pred             --cCCCCcceEEECCChHHHHHHH-HHHcCCC-CEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCC
Confidence              6667889999999999999975 7777899 9999999999999998888884            5777776544444


Q ss_pred             ccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeE
Q 021547          171 EVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVI  249 (311)
Q Consensus       171 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i  249 (311)
                      ..+++.     .++++++++++|+||||.+++.+++++|+++|++||++||+||+|+.+.+++.+ .++..+.. .+++|
T Consensus       190 ~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~-~~~~~~~~~~~~~i  263 (432)
T 3ei9_A          190 FPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNP-RSIFEIPGAEEVAM  263 (432)
T ss_dssp             SCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCC-SSGGGSTTGGGTEE
T ss_pred             cCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCC-CChhhcCCCCCeEE
Confidence            455432     357899999999999999999999999999999999999999999998876543 33434432 45789


Q ss_pred             EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      ++.|+||.|+++|+|+||+++++.........+++.+..... ...++++++|.++.+++.
T Consensus       264 ~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  324 (432)
T 3ei9_A          264 ETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLT  324 (432)
T ss_dssp             EEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSS
T ss_pred             EEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHh
Confidence            999999999999999999998654200001113566655532 345688999998887764

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=100.00  E-value=4.5e-36  Score=275.79  Aligned_cols=271  Identities=20%  Similarity=0.263  Sum_probs=219.3

Q ss_pred             ccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCC
Q 021547            9 WGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPM   86 (311)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~   86 (311)
                      |...++++.+.   -..+.++.++...       ..+++|+|+.|.|..  ...+++.+.+++.+.+...  ....|.+.
T Consensus         6 ~~~~~~~~~~~---~~~~~~~~~~~~~-------~~~~~i~l~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~   73 (397)
T 2zyj_A            6 WSEAFGKGAGR---IQASTIRELLKLT-------QRPGILSFAGGLPAP--ELFPKEEAAEAAARILREKGEVALQYSPT   73 (397)
T ss_dssp             HHHHSCGGGGG---CCCCHHHHHHHHH-------TSTTCEEESSCCCCG--GGCCHHHHHHHHHHHHHHHHHHHTSCCCT
T ss_pred             HHHHhhhhhcc---cCchHHHHHHhhc-------cCCCceecCCCCCCc--hhCCHHHHHHHHHHHHHhcchhhhCCCCC
Confidence            44445655554   3445567666532       246799999997652  2346789999998887642  13478887


Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP  166 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  166 (311)
                      .|..++|++++++++      +++++|++|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.++...
T Consensus        74 ~~~~~l~~~la~~~g------~~~~~v~~~~g~~~al~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~  146 (397)
T 2zyj_A           74 EGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEG-SPVLLEAPSYMGAIQAFRLQGPRFLTVPAGE  146 (397)
T ss_dssp             TCCHHHHHHHHHHHT------SCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCHHHHHHHHTTCCEEEEEEEET
T ss_pred             CCCHHHHHHHHHHhC------CChhhEEEeccHHHHHHHHHHHhCCCC-CEEEEeCCCcHHHHHHHHHcCCEEEecCcCC
Confidence            899999999999992      567899999999999999999999999 9999999999999999999999999998753


Q ss_pred             CCCcccCHHHHHhhcCC-CccEE-EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547          167 ERGWEVDLEAVEALADE-NTAAI-VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS  244 (311)
Q Consensus       167 ~~~~~~d~~~l~~~l~~-~~~~i-~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~  244 (311)
                        + ++|+++|++.+++ +++++ ++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.++..++.
T Consensus       147 --~-~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~  223 (397)
T 2zyj_A          147 --E-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAR  223 (397)
T ss_dssp             --T-EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHH
T ss_pred             --C-CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCc
Confidence              2 4899999998875 78887 56899999999999999999999999999999999999999887665555555544


Q ss_pred             C---CCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          245 I---VPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       245 ~---~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +   ++++++.|+||.|+ +|+|+||++++.        ++++.++.... ...++++++|+++.++|++
T Consensus       224 ~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  284 (397)
T 2zyj_A          224 EAGYPGVIYLGSFSKVLS-PGLRVAFAVAHP--------EALQKLVQAKQGADLHTPMLNQMLVHELLKE  284 (397)
T ss_dssp             HHTCCCEEEEEESTTTTC-GGGCCEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHTT
T ss_pred             ccCCCeEEEEeccccccc-ccceeEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHh
Confidence            4   67899999999998 999999999852        47777766533 3456799999999988864

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=100.00  E-value=1.3e-35  Score=277.36  Aligned_cols=277  Identities=16%  Similarity=0.159  Sum_probs=213.9

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHH--hcCCCCCCCCCCCcHHHHHHHHHH
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSV--RSSMFNCYAPMFGLPLARRAVAEY   99 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~--~~~~~~~Y~~~~g~~~lr~~ia~~   99 (311)
                      ...+.|+.+...+.+    ...+.+|+|+.|.| +.....+..+.+.+++.+..  .......|.+..|.+++|++++++
T Consensus        31 ~~~~~i~~~~~~~~~----~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~  106 (448)
T 3meb_A           31 SPPDAILNLTVLYNA----DTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFL  106 (448)
T ss_dssp             CCCCTTHHHHHHHHH----CCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHh----CCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHH
Confidence            344556776655322    24566899999987 54334456788888877765  223455899989999999999999


Q ss_pred             HhhcCCCC---CCCCCEEE--eCChHHHHHH--HHHHHhcCCCCEEEecCCCCcchHHHHH----HcCcEEEEeeccCCC
Q 021547          100 LNRDLPYK---LSADDIYI--TLGCMEAVEI--ILTVITRLGAANILLPRPGWPFYESFAK----RNHIEVRHFDLLPER  168 (311)
Q Consensus       100 l~~~~g~~---~~~~~v~~--t~g~~~a~~~--~~~~l~~~g~d~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~  168 (311)
                      +.   |..   +.+++|++  |+|+++++.+  .+.+++.+| |+|+++.|+|.++...++    ..|.+++.+++.+.+
T Consensus       107 l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~g-d~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~  182 (448)
T 3meb_A          107 MF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPK-AEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKD  182 (448)
T ss_dssp             HH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTT-CCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTT
T ss_pred             hc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCC-CEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccc
Confidence            94   322   22689999  9999999987  556677899 999999999999999999    999999999875444


Q ss_pred             -CcccCHHHHHhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC--CCCccccc
Q 021547          169 -GWEVDLEAVEALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST--PYIPMGVF  242 (311)
Q Consensus       169 -~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~--~~~~~~~~  242 (311)
                       ++.+|++.+++.++   ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++.  ....+..+
T Consensus       183 ~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~  262 (448)
T 3meb_A          183 GELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMF  262 (448)
T ss_dssp             SCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHH
T ss_pred             cCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHH
Confidence             68899999999886   3577888899999999999999999999999999999999999999887641  11222222


Q ss_pred             -CCCCCeEEEecCcccCCCCcceeeEE--Ee--------eCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547          243 -GSIVPVITLGSISKRWIVPGWRFGWL--AT--------NDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       243 -~~~~~~i~i~s~sK~~~~~G~r~G~i--~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~  310 (311)
                       ....++|++.|+||.|+++|+|+||+  ++        ++++ .  .+.+++.+... .....+++.++|.+++.+|++
T Consensus       263 ~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~-~--~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  339 (448)
T 3meb_A          263 VDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKA-L--SAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHD  339 (448)
T ss_dssp             HHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHH-H--HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTS
T ss_pred             hhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHH-H--HHHHHHHHHHHHhcccCCccHHHHHHHHHHhcC
Confidence             23457899999999999999999998  55        3321 0  01366666654 344567889999999988764

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=100.00  E-value=1.7e-36  Score=281.53  Aligned_cols=254  Identities=17%  Similarity=0.222  Sum_probs=209.0

Q ss_pred             CCCeeecCCCCC-CCCCCCCCcHHH--HHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCC---EEEeC
Q 021547           44 PRPVIPLGHGDP-AAFPCFRTAAVA--EDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADD---IYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p-~~~~~~~~~~~~--~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~---v~~t~  117 (311)
                      .+++|+|+.|.| .    ++.++.+  .+++.+.+......+|++..|..++|+++++++++.+ +++++++   |++|+
T Consensus        46 ~~~~i~l~~g~~~~----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~  120 (430)
T 2x5f_A           46 KSTTYNATIGMATN----KDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTN  120 (430)
T ss_dssp             TTCSEECCCSSCEE----TTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEES
T ss_pred             CCCcEEeeeeeccC----CCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcC
Confidence            357899999986 4    3345555  5665555433234589988899999999999998764 6777888   99999


Q ss_pred             ChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHH-cCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCC
Q 021547          118 GCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKR-NHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINP  193 (311)
Q Consensus       118 g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p  193 (311)
                      |+++++.+++.+++++| |+|+++.|+|.++...++. .|.+++.++....+ +.+|+++|++.+++   +++++++++|
T Consensus       121 g~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p  198 (430)
T 2x5f_A          121 ALTHGLSLVGDLFVNQD-DTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYP  198 (430)
T ss_dssp             HHHHHHHHHHHHHCCTT-CEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSS
T ss_pred             CchHHHHHHHHHHhCCC-CEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCC
Confidence            99999999999999999 9999999999999999999 99999999875533 77999999998876   7899999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHH-----hCCEEEEeccccCCccCCCCCCccc-ccCC-CCC---eEEEecCcccCCCCcc
Q 021547          194 CNPCGNVLTYQHLQKIAETARK-----LGILVIADEVYGHLAFGSTPYIPMG-VFGS-IVP---VITLGSISKRWIVPGW  263 (311)
Q Consensus       194 ~nptG~~~~~~~l~~l~~l~~~-----~~~~li~D~ay~~~~~~~~~~~~~~-~~~~-~~~---~i~i~s~sK~~~~~G~  263 (311)
                      +||||.+++.+++++|+++|++     +|+++|+||+|..+.+++.++.++. .++. .++   +|+++|+||.|+++|+
T Consensus       199 ~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  278 (430)
T 2x5f_A          199 NNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGF  278 (430)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGG
T ss_pred             CCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCC
Confidence            9999999999999999999999     9999999999999988765444543 3432 456   8999999999999999


Q ss_pred             eeeEEEeeCCCCccchhhHHHHHhhhhc-----cccCCCchhHHHHHhhhh
Q 021547          264 RFGWLATNDPNGVLQKSGIVGSIKACLG-----VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       264 r~G~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~q~~~~~~l~  309 (311)
                      |+||+++.++.     +++++.+.....     .+.++|+++|+++.++|+
T Consensus       279 riG~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~  324 (430)
T 2x5f_A          279 RVGFMTFGTSD-----QTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLK  324 (430)
T ss_dssp             CCEEEEEBCCC-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred             CeEEEEEecCC-----HHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHc
Confidence            99999982110     246777665532     356789999999999887

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=100.00  E-value=2.6e-35  Score=266.38  Aligned_cols=243  Identities=18%  Similarity=0.252  Sum_probs=209.6

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      ..++++|+|+.|.+.    +++++.+.+++.+.+..  ...|+. .+..++|++++++++      +++++|++|+|+++
T Consensus        13 ~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~~------~~~~~i~~~~g~~~   79 (354)
T 3ly1_A           13 PSTDNPIRINFNENP----LGMSPKAQAAARDAVVK--ANRYAK-NEILMLGNKLAAHHQ------VEAPSILLTAGSSE   79 (354)
T ss_dssp             CCSSSCEECSSCCCS----SCCCHHHHHHHHHTGGG--TTSCCH-HHHHHHHHHHHHHTT------SCGGGEEEESHHHH
T ss_pred             CCCCceEEccCCCCC----CCCCHHHHHHHHHHHhh--CcCCCC-CchHHHHHHHHHHhC------CChHHEEEeCChHH
Confidence            457899999999853    67899999999988863  446744 578999999999983      56789999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC--CCccEEEEeCCCCCCcc
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD--ENTAAIVIINPCNPCGN  199 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~p~nptG~  199 (311)
                      ++.+++.+++++| |+|+++.|+|.++...++..|.+++.++..  .++.+|++.|++.++  ++++++++++|+||||.
T Consensus        80 a~~~~~~~l~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~  156 (354)
T 3ly1_A           80 GIRAAIEAYASLE-AQLVIPELTYGDGEHFAKIAGMKVTKVKML--DNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGT  156 (354)
T ss_dssp             HHHHHHHHHCCTT-CEEEEESSSCTHHHHHHHHTTCEEEEECCC--TTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCC
T ss_pred             HHHHHHHHHhCCC-CeEEECCCCchHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCC
Confidence            9999999999999 999999999999999999999999999875  357899999999987  78999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC-CCeEEEecCcccCCCCcceeeEEEeeCCCCccc
Q 021547          200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI-VPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ  278 (311)
Q Consensus       200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~-~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~  278 (311)
                      +++.+++.+|+++| ++|+++|+|++|+.+.+++.....+...+.. +++++++|+||.|+++|+|+||++++.      
T Consensus       157 ~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------  229 (354)
T 3ly1_A          157 ITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHP------  229 (354)
T ss_dssp             CCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCH------
T ss_pred             CcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCH------
Confidence            99999999999999 8999999999999988776544444333444 688999999999999999999999842      


Q ss_pred             hhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          279 KSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                        ++++.++..... +++|+++|+++.++|++
T Consensus       230 --~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~  258 (354)
T 3ly1_A          230 --TVIALMGRYVAG-EKINFSGVDAALASMND  258 (354)
T ss_dssp             --HHHHHHGGGTTC-SCCCHHHHHHHHHHTTC
T ss_pred             --HHHHHHHHhcCC-CCCCHHHHHHHHHHhcC
Confidence              478888877653 68899999999988864

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=100.00  E-value=2.1e-35  Score=274.66  Aligned_cols=254  Identities=21%  Similarity=0.338  Sum_probs=209.9

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----------CCCCCCCCCcHHHHHHHHHHHhhcCC--CCCC
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----------FNCYAPMFGLPLARRAVAEYLNRDLP--YKLS  109 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----------~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~  109 (311)
                      ++..+|+|+.+..     ...++.+.+++.+......           ..+|.+..|..++|+++++++.+.++  +.++
T Consensus        36 ~p~~~i~lg~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~  110 (435)
T 3piu_A           36 NTNGIIQMGLAEN-----QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFD  110 (435)
T ss_dssp             BTTSBEECSSCCC-----CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCC
T ss_pred             CCCCeEEeccccc-----cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCC
Confidence            3567889998752     2237778887776543211           13699989999999999999986544  5577


Q ss_pred             CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH-HcCcEEEEeeccCCCCcccCHHHHHhhcCC-----
Q 021547          110 ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK-RNHIEVRHFDLLPERGWEVDLEAVEALADE-----  183 (311)
Q Consensus       110 ~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----  183 (311)
                      +++|++|+|+++++..++.+++++| |.|+++.|+|.++...+. ..|.+++.++.....++.+|++.|++.+++     
T Consensus       111 ~~~v~~~~gg~~a~~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~  189 (435)
T 3piu_A          111 PNHLVLTAGATSANETFIFCLADPG-EAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRN  189 (435)
T ss_dssp             GGGEEEEEHHHHHHHHHHHHHCCTT-CEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTT
T ss_pred             HHHEEEcCChHHHHHHHHHHhcCCC-CeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcC
Confidence            8999999999999999999999999 999999999999988887 789999999987666778999999998865     


Q ss_pred             -CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC----------CCCeEEEe
Q 021547          184 -NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS----------IVPVITLG  252 (311)
Q Consensus       184 -~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~----------~~~~i~i~  252 (311)
                       +++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.|++..+.++..+..          .++++++.
T Consensus       190 ~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~  269 (435)
T 3piu_A          190 LRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVY  269 (435)
T ss_dssp             CCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEE
T ss_pred             CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEE
Confidence             7899999999999999999999999999999999999999999998887766555443322          45789999


Q ss_pred             cCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          253 SISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       253 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      |+||.|+++|+|+||++++++       .+++.++.... ...+++++|+++++++++
T Consensus       270 s~sK~~g~~G~r~G~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~  319 (435)
T 3piu_A          270 SLSKDLGLPGFRVGAIYSNDD-------MVVAAATKMSS-FGLVSSQTQHLLSAMLSD  319 (435)
T ss_dssp             ESSSSSCCGGGCEEEEEESCH-------HHHHHHHHHGG-GSCCCHHHHHHHHHHHHC
T ss_pred             eeecccCCCceeEEEEEeCCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhcC
Confidence            999999999999999998653       36666665544 346789999999888764

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=100.00  E-value=1.1e-34  Score=263.13  Aligned_cols=241  Identities=21%  Similarity=0.265  Sum_probs=204.6

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +.+++|+|+.|.+.    +++++.+.+++.+.+.  ....|+ ..+..++|++++++++      +++++|++|+|++++
T Consensus        30 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~-~~~~~~lr~~la~~~~------~~~~~v~~~~g~t~a   96 (363)
T 3ffh_A           30 GLTKITKLSSNENP----LGTSKKVAAIQANSSV--ETEIYP-DGWASSLRKEVADFYQ------LEEEELIFTAGVDEL   96 (363)
T ss_dssp             TCSCCEECSSCSCT----TCCCHHHHHHHHTCBS--CCCBC-----CHHHHHHHHHHHT------CCGGGEEEESSHHHH
T ss_pred             CCCceEEccCCCCC----CCCCHHHHHHHHHHHH--HhhcCC-CcchHHHHHHHHHHhC------CChhhEEEeCCHHHH
Confidence            45799999999753    6788999999988664  344564 4688999999999994      567899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+++++| |+|+++.|+|..+...++..|.+++.++..+  ++.+|++++++.++++++++++++|+||||.+++
T Consensus        97 ~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~  173 (363)
T 3ffh_A           97 IELLTRVLLDTT-TNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIE  173 (363)
T ss_dssp             HHHHHHHHCSTT-CEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHHccCC-CEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcC
Confidence            999999999999 9999999999999999999999999998753  5789999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++.++++.|++ |+++|+|++|+.+.+ +.....+......+++|++.|+||.++++|+|+||++++.        ++
T Consensus       174 ~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~  243 (363)
T 3ffh_A          174 LADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK--------EI  243 (363)
T ss_dssp             HHHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECH--------HH
T ss_pred             HHHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCH--------HH
Confidence            9988888888877 999999999998877 4433444444456689999999999999999999999842        47


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.++.... .+++++++|+++.++|++
T Consensus       244 ~~~l~~~~~-~~~~~~~~~~~~~~~l~~  270 (363)
T 3ffh_A          244 IRQLNIVRP-PFNTTSIGQKLAIEAIKD  270 (363)
T ss_dssp             HHHHHHTCC-SCCCBHHHHHHHHHHHHC
T ss_pred             HHHHHHhCC-CCCCCHHHHHHHHHHhcC
Confidence            888887755 567899999999988864

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=100.00  E-value=4.7e-35  Score=265.88  Aligned_cols=242  Identities=18%  Similarity=0.224  Sum_probs=205.9

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +.+++|+|+.|.+.    +++++.+++++.+.+.  ....|++..+ .++|+++++++      ++++++|++|+|++++
T Consensus        28 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~------~~~~~~v~~~~g~~~a   94 (365)
T 3get_A           28 GVKEVIKLASNENP----FGTPPKAIECLRQNAN--KAHLYPDDSM-IELKSTLAQKY------KVQNENIIIGAGSDQV   94 (365)
T ss_dssp             TCSCCEECSSCCCT----TCSCHHHHHHHHHHGG--GTTSCCCTTC-HHHHHHHHHHH------TCCGGGEEEESSHHHH
T ss_pred             CCCceEEecCCCCC----CCCCHHHHHHHHHHHH--hhccCCCCCh-HHHHHHHHHHh------CCCcceEEECCCHHHH
Confidence            34789999999854    6789999999999886  3457887666 89999999999      3567899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +.+++.+++++| |+|+++.|+|..+...++..|.+++.+++ ..+++ +|++++++.++++++++++++|+||||.+++
T Consensus        95 ~~~~~~~l~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~  171 (365)
T 3get_A           95 IEFAIHSKLNSK-NAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLD  171 (365)
T ss_dssp             HHHHHHHHCCTT-CEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHHhCCC-CEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcC
Confidence            999999999999 99999999999999999999999999987 44667 9999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCcc--CCCC-CCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAF--GSTP-YIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK  279 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~--~~~~-~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~  279 (311)
                      .+++.+|+++| ++|+++|+|++|+.+.|  .+.. ...+...+..+++++++|+||.|+++|+|+||++++.       
T Consensus       172 ~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------  243 (365)
T 3get_A          172 ASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANA-------  243 (365)
T ss_dssp             HHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECH-------
T ss_pred             HHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCH-------
Confidence            99999999988 57999999999998775  4322 2223333345678999999999999999999999832       


Q ss_pred             hhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          280 SGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                       ++++++..... .+++|+++|+++.++|++
T Consensus       244 -~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~  272 (365)
T 3get_A          244 -NIISAFYKLRA-PFNVSNLALKAAVAAMDD  272 (365)
T ss_dssp             -HHHHHHHHHSC-TTCSCHHHHHHHHHHHTC
T ss_pred             -HHHHHHHHhcC-CCCcCHHHHHHHHHHhCC
Confidence             47788877755 356899999999988864

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=100.00  E-value=2.7e-35  Score=270.12  Aligned_cols=277  Identities=19%  Similarity=0.164  Sum_probs=212.4

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHh
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPA-AFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLN  101 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~-~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~  101 (311)
                      ...+.++.+.....+.    .++++|+|+.|.|. ..+..++++.+.+++.+.+......+|.+..|..++|+++++++.
T Consensus         8 ~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~   83 (394)
T 2ay1_A            8 QAPDKILALMGEFRAD----PRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELIL   83 (394)
T ss_dssp             CCCCSHHHHHHHHHHC----CCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHhC----CCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHh
Confidence            3445566666543322    46789999999852 112246789999999988765455689888899999999999985


Q ss_pred             hcCCCCCCCCCEEE--eCChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHH
Q 021547          102 RDLPYKLSADDIYI--TLGCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAV  177 (311)
Q Consensus       102 ~~~g~~~~~~~v~~--t~g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  177 (311)
                      ..   ..++++|++  |+|+++++++++.++..  +| |+|+++.|+|.++...++..|.+++.++....+++.+|++.+
T Consensus        84 ~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  159 (394)
T 2ay1_A           84 GD---GLKSETTATLATVGGTGALRQALELARMANPD-LRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGM  159 (394)
T ss_dssp             GG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTT-CCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHH
T ss_pred             CC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHH
Confidence            32   236789999  99999999999988865  89 999999999999999999999999999876556788999999


Q ss_pred             HhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC-CCCcccccCC-CCCeEEEe
Q 021547          178 EALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST-PYIPMGVFGS-IVPVITLG  252 (311)
Q Consensus       178 ~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~-~~~~~~~~~~-~~~~i~i~  252 (311)
                      ++.+++   +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++. +..++..+.. .+++|+++
T Consensus       160 ~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  239 (394)
T 2ay1_A          160 KADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAA  239 (394)
T ss_dssp             HHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEE
T ss_pred             HHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEE
Confidence            998764   356677799999999999999999999999999999999999999877531 1122222221 34689999


Q ss_pred             cCcccCCCCcceeeEEEe--eCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547          253 SISKRWIVPGWRFGWLAT--NDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       253 s~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      |+||.|+++|+|+||+++  ++++ ..  ..+++.++.. .....++++++|+++.++|++
T Consensus       240 s~sK~~~~~G~riG~~~~~~~~~~-~~--~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  297 (394)
T 2ay1_A          240 SCSKNFGIYRERTGCLLALCADAA-TR--ELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTT  297 (394)
T ss_dssp             ECTTTTTCGGGCEEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHS
T ss_pred             eccCCCcCcCCccceEEEEeCCHH-HH--HHHHHHHHHHHhhhcCCCChHHHHHHHHHhcC
Confidence            999999999999999997  3321 00  1233444433 233345699999999888764

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=100.00  E-value=2.4e-34  Score=264.69  Aligned_cols=267  Identities=21%  Similarity=0.241  Sum_probs=200.4

Q ss_pred             HHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCcHHHHHHHHHHHhhcC
Q 021547           29 RYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS----MFNCYAPMFGLPLARRAVAEYLNRDL  104 (311)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~l~~~~  104 (311)
                      .++.++......+..++++|+|+.|++.    +++++.+.+++.+.+...    ....|.+..|..++|+++++++.  +
T Consensus        17 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~   90 (400)
T 3asa_A           17 ADLQKRVAQFRLENPQHTVINLSIGDTT----QPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--R   90 (400)
T ss_dssp             HHHHHHHHHHHHHCTTSCCEECSSCCCC----CCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--T
T ss_pred             HHHHHHHHHhhhhcCCCceEeccCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--c
Confidence            3444333333323357889999999854    567899999998887531    24578887899999999999974  4


Q ss_pred             CCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcE-EEEeeccCCCCcccCHHHHHhhcCC
Q 021547          105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIE-VRHFDLLPERGWEVDLEAVEALADE  183 (311)
Q Consensus       105 g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~d~~~l~~~l~~  183 (311)
                      |. +++++|++|+|+++++.+++. ++.+| |+|+++.|+|.++...++..|.+ ++.++...++++..+++   +.  +
T Consensus        91 g~-~~~~~v~~~~G~~~al~~~~~-~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~---~~--~  162 (400)
T 3asa_A           91 GF-VDAKEIFISDGAKVDLFRLLS-FFGPN-QTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFP---ED--T  162 (400)
T ss_dssp             TS-SCGGGEEEESCHHHHHHHHHH-HHCSS-CEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCC---TT--C
T ss_pred             CC-CCHHHEEEccChHHHHHHHHH-HcCCC-CEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChh---hc--c
Confidence            54 678899999999999998765 45789 99999999999999999999998 89888754434444432   21  5


Q ss_pred             CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCc
Q 021547          184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPG  262 (311)
Q Consensus       184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G  262 (311)
                      +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++..+.++..++. .+++|++.|+||.|+++|
T Consensus       163 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G  242 (400)
T 3asa_A          163 HIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAG  242 (400)
T ss_dssp             CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTT
T ss_pred             CccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcc
Confidence            7899999999999999999999999999999999999999999988776543344555543 346899999999999999


Q ss_pred             ceeeEEEeeCCCCccchhhHHHHHhh-hhc-cccCCCchhHHHHHhhhhc
Q 021547          263 WRFGWLATNDPNGVLQKSGIVGSIKA-CLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       263 ~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +|+||+++++......... +..+.. ... ...++|+++|.++.++|++
T Consensus       243 lriG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  291 (400)
T 3asa_A          243 IRLGWTVIPQELTYADGHF-VIQDWERFLSTTFNGASIPAQEAGVAGLSI  291 (400)
T ss_dssp             CCCEEEECCTTCBCTTSCB-HHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_pred             hheeEEeeChhhccchhhh-HHHHHHHHhccCccCCChHHHHHHHHHhCc
Confidence            9999999864310000000 232221 122 1236899999999988864

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=100.00  E-value=1.9e-34  Score=266.17  Aligned_cols=279  Identities=15%  Similarity=0.078  Sum_probs=208.9

Q ss_pred             HhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHH
Q 021547           22 EAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL  100 (311)
Q Consensus        22 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l  100 (311)
                      ..+++.|..+.+.+.+     ++.+.|||++|.+ +.....+..+.|++|...+.+.+..+.|.|..|+++||+++++++
T Consensus        26 ~~p~d~i~~l~~~~~~-----d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~  100 (420)
T 4h51_A           26 AQAPDVIFDLAKRAAA-----AKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKII  100 (420)
T ss_dssp             CCCCCHHHHHHHHHHH-----CCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHH
T ss_pred             CCCCChHHHHHHHHhc-----CCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHh
Confidence            3667788888765322     2344899999932 112334667899999888887766667999999999999999998


Q ss_pred             hhcCCCCCCCCCE--EEeCChHHHHHHHHHHHh----cCCCCEEEecCCCCcchHHHHHHcCcE-EEEeeccCCCCcccC
Q 021547          101 NRDLPYKLSADDI--YITLGCMEAVEIILTVIT----RLGAANILLPRPGWPFYESFAKRNHIE-VRHFDLLPERGWEVD  173 (311)
Q Consensus       101 ~~~~g~~~~~~~v--~~t~g~~~a~~~~~~~l~----~~g~d~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~d  173 (311)
                      ...   ....+.+  +.|.|+|+|+..++..+.    ++| |+|++++|+|++|...++..|.+ +..++....+++.+|
T Consensus       101 ~g~---~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pg-d~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d  176 (420)
T 4h51_A          101 YGN---TVELENLVAVQTLSGTGAVSLGAKLLTRVFDAET-TPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLN  176 (420)
T ss_dssp             HC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTT-SCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEEC
T ss_pred             cCC---CccccccceeeecCchHHHHHHHHHHHHhcCCCC-CEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCC
Confidence            542   2233333  458899988877766664    589 99999999999999999999997 445555555667788


Q ss_pred             HHHHHhhc---CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcc---cccCCCCC
Q 021547          174 LEAVEALA---DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM---GVFGSIVP  247 (311)
Q Consensus       174 ~~~l~~~l---~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~---~~~~~~~~  247 (311)
                      .+.+.+.+   .++++++++++||||||..++.+++++|+++|+++++++|+|++|.+|.|++......   ...+...+
T Consensus       177 ~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~  256 (420)
T 4h51_A          177 FEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIE  256 (420)
T ss_dssp             HHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCC
T ss_pred             HHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCce
Confidence            88877654   4577788888999999999999999999999999999999999999998875322221   11133457


Q ss_pred             eEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547          248 VITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       248 ~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++.||||.|+++|+|+||++++.+.... ...+..++... .....+++..+|.+++.++++
T Consensus       257 ~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~-~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d  319 (420)
T 4h51_A          257 VLLAQSFSKNMGLYSERAGTLSLLLKDKTK-RADVKSVMDSLIREEYTCPPAHGARLAHLILSN  319 (420)
T ss_dssp             CEEEEECTTTSCCGGGCEEEEEEECSCHHH-HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHS
T ss_pred             EEEEeccccccccccCceEEEEecccCHHH-HHHHHHHHHHhhhcccCcchHHHHHHHHHHhcC
Confidence            899999999999999999999987653111 12233444434 344578899999999988875

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=100.00  E-value=1.5e-34  Score=269.36  Aligned_cols=281  Identities=22%  Similarity=0.276  Sum_probs=216.7

Q ss_pred             ccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCee-ecCCCCCCCCCCCCCcHHHHHHHHHHHhc-------CC---
Q 021547           11 FEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVI-PLGHGDPAAFPCFRTAAVAEDAIVDSVRS-------SM---   79 (311)
Q Consensus        11 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i-~~~~g~p~~~~~~~~~~~~~~a~~~~~~~-------~~---   79 (311)
                      +.+|+...+  ...++.++.++..+.+...   .+++| +|++|.|...  .+..+.+.+++.+.+..       ..   
T Consensus         2 ~~~s~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~i~~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (444)
T 3if2_A            2 MKFSKFGQK--FTQPTGISQLMDDLGDALK---SDQPVNMLGGGNPAKI--DAVNELFLETYKALGNDNDTGKANSSAII   74 (444)
T ss_dssp             CCCCHHHHH--HHSCCHHHHHHHHHHHHHH---SSSCCEECSCCCCCCC--HHHHHHHHHHHHHHHSCSCTTCCCCHHHH
T ss_pred             CCcchhhhh--ccCchhHHHHHHHHHhhhc---CchhhhccCCCCCCcc--cchHHHHHHHHHHHHhccccccccchhhh
Confidence            345544433  4556788888877765542   47899 9999997631  11125566666666654       21   


Q ss_pred             -CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCC--------------EEEec-CC
Q 021547           80 -FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAA--------------NILLP-RP  143 (311)
Q Consensus        80 -~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d--------------~Vl~~-~p  143 (311)
                       ...|.+..|.+++|+++++++.+.+|+.+++++|++|+|+++++.+++.+++++| |              +|+++ .|
T Consensus        75 ~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~g-d~~~~~~~~~~g~~~~vi~~~~p  153 (444)
T 3if2_A           75 SMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAF-VNEHSQDKESKSVDKSILLPLTP  153 (444)
T ss_dssp             HHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEE-ECC-------CEEEEEEEESSSS
T ss_pred             hhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCC-ccccccccccccccceEEEeCCC
Confidence             2479998999999999999999989999999999999999999999999999999 8              78876 99


Q ss_pred             CCcchHHH------HHHcCcEEEEeeccCCC---CcccCHHHHHhh---cCCCccEEEEeCCCCCCccCCCHHHHHHHHH
Q 021547          144 GWPFYESF------AKRNHIEVRHFDLLPER---GWEVDLEAVEAL---ADENTAAIVIINPCNPCGNVLTYQHLQKIAE  211 (311)
Q Consensus       144 ~~~~~~~~------~~~~g~~~~~~~~~~~~---~~~~d~~~l~~~---l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~  211 (311)
                      +|..|...      +...|..++.++.+.++   ++.+|++.|+++   ++++++++++++|+||||.+++.+++++|++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~  233 (444)
T 3if2_A          154 EYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAE  233 (444)
T ss_dssp             CCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred             CccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHH
Confidence            99988763      34567777777764322   357999999998   6788999999999999999999999999999


Q ss_pred             HHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc
Q 021547          212 TARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG  291 (311)
Q Consensus       212 l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  291 (311)
                      +|++||++||+|++|+.+.. +....... ....+++|++.|+||. +++|+|+||++++.        ++++.+.....
T Consensus       234 ~a~~~~~~li~De~~~~~~~-~~~~~~~~-~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~--------~l~~~~~~~~~  302 (444)
T 3if2_A          234 IAKRYDIPLIIDNAYGMPFP-NIIYSDAH-LNWDNNTILCFSLSKI-GLPGMRTGIIVADA--------KVIEAVSAMNA  302 (444)
T ss_dssp             HHHHTTCCEEEECTTCTTTT-CCBCSCCC-CCCCTTEEEEEESTTT-TCGGGCCEEEECCH--------HHHHHHHHHHH
T ss_pred             HHHHCCCEEEEECCCCCccc-cccccccc-ccCCCCEEEEechhhc-cCCCCceEEEEECH--------HHHHHHHHHHH
Confidence            99999999999999985321 11111111 1224578999999997 99999999998743        47777776643


Q ss_pred             -cccCCCchhHHHHHhhhhc
Q 021547          292 -VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       292 -~~~~~~~~~q~~~~~~l~~  310 (311)
                       ...++++++|.+++.++++
T Consensus       303 ~~~~~~~~~~~~a~~~~l~~  322 (444)
T 3if2_A          303 VVNLAPTRFGAAIATPLVAN  322 (444)
T ss_dssp             HHHSSCCCHHHHHHHHHHHT
T ss_pred             hccCCCChHHHHHHHHHHHc
Confidence             4567899999999988864

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=100.00  E-value=1.8e-33  Score=255.60  Aligned_cols=240  Identities=18%  Similarity=0.302  Sum_probs=198.5

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++++|+|+.|.+.    +++++.+.+++.+.+..  ...|+. .+..++|+++++++      ++++++|++|+|++++
T Consensus        22 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~v~~~~g~~~a   88 (364)
T 1lc5_A           22 SPDQLLDFSANINP----LGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETES   88 (364)
T ss_dssp             CGGGSEECSSCCCT----TCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHH
T ss_pred             CccceEEeccccCC----CCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH------CcCHHHEEECCCHHHH
Confidence            35679999999843    45789999999988753  346865 58999999999999      3467899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +.+++.++  +| |+|+++.|+|.++...++..|.+++.++....+++.+ ++.+.+.++++++++++++|+||||.+++
T Consensus        89 l~~~~~~~--~g-d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~  164 (364)
T 1lc5_A           89 IFTVASGL--KP-RRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPE  164 (364)
T ss_dssp             HHHHHHHH--CC-SEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHc--CC-CeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCC
Confidence            99999999  78 9999999999999999999999999998754334443 56566666678899999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE-eeCCCCccchhh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA-TNDPNGVLQKSG  281 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~-~~~~~~~~~~~~  281 (311)
                      .+++++|+++|+++|+++|+||+|..+.+++.+.  +..++..++++++.|+||.|+++|+|+||++ ++.        +
T Consensus       165 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--------~  234 (364)
T 1lc5_A          165 RPLLQAIADRCKSLNINLILDEAFIDFIPHETGF--IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD--------A  234 (364)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS--GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH--------H
T ss_pred             HHHHHHHHHHhhhcCcEEEEECcChhhccCccch--hhHhccCCCEEEEEECchhhcCCccceEEEEECCH--------H
Confidence            9999999999999999999999999887753332  2223445678999999999999999999998 532        4


Q ss_pred             HHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          282 IVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++.++.... .+++|+++|+++.++|++
T Consensus       235 ~~~~l~~~~~-~~~~~~~~~~~~~~~l~~  262 (364)
T 1lc5_A          235 AMARMRRQQM-PWSVNALAALAGEVALQD  262 (364)
T ss_dssp             HHHHHHHHSC-TTCSCHHHHHHHHHGGGC
T ss_pred             HHHHHHHhCC-CCCCCHHHHHHHHHHHhC
Confidence            7777776654 457899999999998864

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=100.00  E-value=1e-33  Score=257.17  Aligned_cols=241  Identities=20%  Similarity=0.311  Sum_probs=206.0

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .++++|+|+.|.+    .+++++.+.+++.+.+.......|+. .+..++|++++++++.    . .+++|++|+|++++
T Consensus        28 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~g~----~-~~~~i~~~~g~t~a   97 (367)
T 3euc_A           28 DSHGLVKLDAMEN----PYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVMQV----P-AGMEVLLGNGSDEI   97 (367)
T ss_dssp             CCTTCEECCSSCC----CCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHHTC----C-TTCEEEEEEHHHHH
T ss_pred             CCCCeeEccCCCC----CCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHhCC----C-CcceEEEcCCHHHH
Confidence            4578999999984    36788999999999887434457866 5889999999999931    1 66899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~  201 (311)
                      +.+++.+++++| |+|+++.|+|.++...++..|.+++.+++..  ++.+|++.|++.+++ +++++++++|+||||.++
T Consensus        98 ~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~  174 (367)
T 3euc_A           98 ISMLALAAARPG-AKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLF  174 (367)
T ss_dssp             HHHHHHHTCCTT-CEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCC
T ss_pred             HHHHHHHHcCCC-CEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCC
Confidence            999999999999 9999999999999999999999999998753  678999999999987 899999999999999999


Q ss_pred             CHHHHHHHHHHHHHh--CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547          202 TYQHLQKIAETARKL--GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK  279 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~--~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~  279 (311)
                      +.+++++|+++|++|  |+++|+|++|+.+.+.+  ...  .+...++++++.|+||. +++|+|+||++++.       
T Consensus       175 ~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~--~~~--~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~-------  242 (367)
T 3euc_A          175 DAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES--WMS--RLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDP-------  242 (367)
T ss_dssp             CHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC--SGG--GGGTCTTEEEEEECCCT-TSCSCCEEEEEECH-------
T ss_pred             CHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc--hHH--HHhhCCCEEEEecchhh-cccccCceeeeeCH-------
Confidence            999999999999999  99999999999876432  222  23445678999999999 99999999999843       


Q ss_pred             hhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          280 SGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                       ++++++..... .+++|+++|+++.++|++
T Consensus       243 -~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~  271 (367)
T 3euc_A          243 -QWLEQLDKVRP-PYNVNVLTEATALFALEH  271 (367)
T ss_dssp             -HHHHHHGGGCC-SSCCCHHHHHHHHHHHTT
T ss_pred             -HHHHHHHHhCC-CCCCCHHHHHHHHHHhcC
Confidence             47788877654 457899999999988864

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=100.00  E-value=2e-34  Score=266.17  Aligned_cols=268  Identities=22%  Similarity=0.270  Sum_probs=196.5

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC----CCCCCCCCCcHHHHHHHHH
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM----FNCYAPMFGLPLARRAVAE   98 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~----~~~Y~~~~g~~~lr~~ia~   98 (311)
                      ..++.++.++....+..   .++++|+|++|.|...  .++.+.+.+++.+.+.++.    ...|.++.|..++|+++++
T Consensus        12 ~~~~~~~~~~~~~~~~~---~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~   86 (417)
T 3g7q_A           12 TRHSGITRLMEDLNDGL---RTPGAIMLGGGNPAHI--PAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAV   86 (417)
T ss_dssp             ----CHHHHHHHHHC--------CCEECSCCCCCCC--HHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHH
T ss_pred             hccccHHHHHHHHHhhc---cCCCceEecCcCCCCC--ChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHH
Confidence            34566776666553332   4578999999997631  1123667777777765432    2379999999999999999


Q ss_pred             HHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCC-----EEEec-CCCCcchHHHHHHc------CcEEEEeeccC
Q 021547           99 YLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAA-----NILLP-RPGWPFYESFAKRN------HIEVRHFDLLP  166 (311)
Q Consensus        99 ~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d-----~Vl~~-~p~~~~~~~~~~~~------g~~~~~~~~~~  166 (311)
                      ++.+.+|+++++++|++|+|+++++++++.+++++| |     +|+++ .|+|.++...+...      +..+..++.. 
T Consensus        87 ~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~g-d~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  164 (417)
T 3g7q_A           87 LLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRR-ADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEG-  164 (417)
T ss_dssp             HHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC-----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGG-
T ss_pred             HHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCC-ccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCc-
Confidence            999989999999999999999999999999999998 7     89997 99999987665432      2233333221 


Q ss_pred             CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547          167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV  246 (311)
Q Consensus       167 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~  246 (311)
                      ..++.+|++.++  ++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.. +....... .+..+
T Consensus       165 ~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~-~~~~~~~~-~~~~~  240 (417)
T 3g7q_A          165 QFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFP-GIIFSEAR-PLWNP  240 (417)
T ss_dssp             EEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTT-CCBCSCCC-CCCCT
T ss_pred             ccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccc-cccccccc-cCCCC
Confidence            124678999888  677899999999999999999999999999999999999999999986321 11111111 12245


Q ss_pred             CeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          247 PVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       247 ~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++|++.|+|| ++++|+|+||++++.        ++++++..... ...++++++|+++++++++
T Consensus       241 ~~i~~~s~sK-~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  296 (417)
T 3g7q_A          241 NIILCMSLSK-LGLPGSRCGIIIAND--------KTITAIANMNGIISLAPGGMGPAMMCEMIKR  296 (417)
T ss_dssp             TEEEEEESGG-GTCTTSCCEEEECCH--------HHHHHHHHHHHHHCCCCCSHHHHHHHHHHHT
T ss_pred             CEEEEEechh-ccCCCcceEEEEeCH--------HHHHHHHHhhcceeeCCCcHHHHHHHHHHcC
Confidence            7899999999 599999999998743        47787777643 4567899999999998864

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=100.00  E-value=2.5e-33  Score=253.90  Aligned_cols=238  Identities=20%  Similarity=0.299  Sum_probs=199.5

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++++|+|+.|.+.    +++++.+.+++.+.+..  ...|+ ..+..++|+++++++      ++++++|++|+|++++
T Consensus        24 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~l~~~la~~~------~~~~~~i~~~~g~t~a   90 (361)
T 3ftb_A           24 KGRELLDYSSNINP----LGIPKSFLNNIDEGIKN--LGVYP-DVNYRRLNKSIENYL------KLKDIGIVLGNGASEI   90 (361)
T ss_dssp             ----CEETTCCCCT----TCSCHHHHTTHHHHHHG--GGSCC-CTTCHHHHHHHHHHH------TCCSCEEEEESSHHHH
T ss_pred             CCCCEEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCC-CccHHHHHHHHHHHh------CCCcceEEEcCCHHHH
Confidence            57899999999753    56789999999998875  34674 468899999999999      3577899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +.+++.++     |+|+++.|+|.++...++..|.+++.+++....  .++++.+++.+++ ++++++++|+||||.+++
T Consensus        91 l~~~~~~~-----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~  162 (361)
T 3ftb_A           91 IELSISLF-----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENM--CIDYEDIISKIDD-VDSVIIGNPNNPNGGLIN  162 (361)
T ss_dssp             HHHHHTTC-----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTS--CCCHHHHHHHTTT-CSEEEEETTBTTTTBCCC
T ss_pred             HHHHHHHc-----CcEEEecCChHHHHHHHHHcCCeEEEeecCccc--CCCHHHHHHhccC-CCEEEEeCCCCCCCCCCC
Confidence            99999888     799999999999999999999999999876433  4677999999988 999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+++|++||+++|+|++|..+.++ .....+......++++++.|+||.++++|+|+||+++.++       ++
T Consensus       163 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~-------~~  234 (361)
T 3ftb_A          163 KEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNK-------EI  234 (361)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCH-------HH
T ss_pred             HHHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCH-------HH
Confidence            999999999999999999999999998876 3333344444556889999999999999999999984432       47


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.++.... .+++|+++|+++.+.|++
T Consensus       235 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~  261 (361)
T 3ftb_A          235 AAKIKAKQN-PWNINCFAEMAAINCLKD  261 (361)
T ss_dssp             HHHHHTTSC-TTCSCHHHHHHHHHTSSC
T ss_pred             HHHHHhhCC-CCCCCHHHHHHHHHHhcC
Confidence            888877655 458899999999988864

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=100.00  E-value=5e-37  Score=281.81  Aligned_cols=251  Identities=19%  Similarity=0.269  Sum_probs=213.1

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE  124 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~  124 (311)
                      +++|+|+.|++.    +++++.+.+++.+.+... ...|.+.  ..++|+++++++.+.+|+.+++++|++|+|+++++.
T Consensus        31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~  103 (392)
T 3b1d_A           31 PQLLPAWIADMD----FEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAIS  103 (392)
Confidence            389999999864    677899999999887643 3467764  789999999999988888888899999999999999


Q ss_pred             HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCC-CcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCC
Q 021547          125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPER-GWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~  202 (311)
                      +++.+++++| |+|+++.|+|..+...++..|.+++.++..+.+ +|.+|++.+++.++ .+++++++++|+||||.+++
T Consensus       104 ~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~  182 (392)
T 3b1d_A          104 IAIQAFTKEG-EAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWE  182 (392)
Confidence            9999999999 999999999999999999999999988874332 46789999999887 67889999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      .+++++|+++|+++|+++|+||+|..+.+++..+.++..++.  .++++++.|+||.|+++|+|+||+++++++      
T Consensus       183 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~------  256 (392)
T 3b1d_A          183 REVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPT------  256 (392)
Confidence            999999999999999999999999999887655556655544  567899999999999999999999986543      


Q ss_pred             hHHHHHhhhhccc--cCCCchhHHHHHhhhhc
Q 021547          281 GIVGSIKACLGVR--SGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       281 ~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~  310 (311)
                       +++.++......  .++++++|+++.++|++
T Consensus       257 -~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  287 (392)
T 3b1d_A          257 -LCAQFKHQQLVNNHHEVSSLGYIATETAYRY  287 (392)
Confidence             666666654422  35789999988887754

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=100.00  E-value=2.3e-34  Score=266.75  Aligned_cols=245  Identities=18%  Similarity=0.158  Sum_probs=197.6

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHH--hc-CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSV--RS-SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~--~~-~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .+|+|+.|.|... .+++++.+.+++.+.+  .. ....+|++..|.+++|+++++++      ++++++|++|+|++++
T Consensus        33 ~~i~l~~g~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~------~~~~~~i~~t~G~~~a  105 (422)
T 3d6k_A           33 LSLDLTRGKPSAE-QLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL------GLPADLVVAQDGSSLN  105 (422)
T ss_dssp             CCEECCCCSCCHH-HHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH------TCCGGGEEECSSCHHH
T ss_pred             CeEeCCCCCCChh-hCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh------CCChhHEEEecchHHH
Confidence            4899999986410 1456667777776543  12 23558999999999999999999      3578899999999999


Q ss_pred             H--HHHHHHHhcC------------CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccE
Q 021547          123 V--EIILTVITRL------------GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAA  187 (311)
Q Consensus       123 ~--~~~~~~l~~~------------g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~  187 (311)
                      +  .+++.++..+            + |+|+++.|+|..|...++..|.+++.++++.+   ++|++.+++.+++ ++++
T Consensus       106 l~l~~~~~~l~~~~~~g~~~~~~~d~-~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~  181 (422)
T 3d6k_A          106 IMFDLISWSYTWGNNDSSRPWSAEEK-VKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDPQVKG  181 (422)
T ss_dssp             HHHHHHHHHHHHCCTTCSSCGGGSSC-CEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTSTTEEE
T ss_pred             HHHHHHHHHhcCcccccccccccCCC-CEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcCCCeE
Confidence            7  6777888765            4 68999999999999999999999999998542   4899999998875 7888


Q ss_pred             EE-EeCCCCCCccCCCHHHHHHHHHHHH-HhCCEEEEeccccC--CccCCCCCCcccc----cCCCCCeEEEecCcccCC
Q 021547          188 IV-IINPCNPCGNVLTYQHLQKIAETAR-KLGILVIADEVYGH--LAFGSTPYIPMGV----FGSIVPVITLGSISKRWI  259 (311)
Q Consensus       188 i~-i~~p~nptG~~~~~~~l~~l~~l~~-~~~~~li~D~ay~~--~~~~~~~~~~~~~----~~~~~~~i~i~s~sK~~~  259 (311)
                      ++ +++|+||||.+++.+++++|+++|+ ++|++||+||+|..  +.+++.++.++..    .+..+++|+++||||. +
T Consensus       182 v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~  260 (422)
T 3d6k_A          182 MWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-T  260 (422)
T ss_dssp             EEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-S
T ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-c
Confidence            87 6799999999999999999999999 99999999999986  4444333334422    2345689999999998 8


Q ss_pred             CCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          260 VPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       260 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +||+|+||++++.        ++++.+..... .++++++++|++++++|++
T Consensus       261 ~~GlriG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~  304 (422)
T 3d6k_A          261 HAGSGVSFFASSK--------ENIEWYASHANVRGIGPNKLNQLAHAQFFGD  304 (422)
T ss_dssp             CTTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCS
T ss_pred             CcccceEEEEeCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHhC
Confidence            9999999999853        47777776643 4567899999999998875

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=100.00  E-value=3.4e-34  Score=265.89  Aligned_cols=247  Identities=16%  Similarity=0.151  Sum_probs=199.9

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHH--HHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAI--VDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~--~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      ...+|+|+.|.|+.. .++.++.+.+++  .+.+...  ...+|++..|..++|+++++++      ++++++|++|+|+
T Consensus        32 ~~~~i~~~~G~p~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~  104 (427)
T 3ppl_A           32 KNLKLDLTRGKPSSE-QLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL------GVPVEQVLAGDAS  104 (427)
T ss_dssp             TCCCEECCCCSCCHH-HHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH------TSCGGGEEECSSC
T ss_pred             CCceEecCCCCCChH-HCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh------CCCcceEEEeCCc
Confidence            356899999987621 122233455555  4444322  3568999899999999999999      4678899999999


Q ss_pred             HHHH--HHHHHHHhc--C----------CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-CC
Q 021547          120 MEAV--EIILTVITR--L----------GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-EN  184 (311)
Q Consensus       120 ~~a~--~~~~~~l~~--~----------g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~  184 (311)
                      ++++  .+++.+++.  +          | |+|+++.|+|..+...++..|.+++.++++.+   ++|++.|++.++ ++
T Consensus       105 ~~al~~~~~~~~l~~~~~g~~~~~~~~~g-d~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~  180 (427)
T 3ppl_A          105 SLNIMFDVISWSYIFGNNDSVQPWSKEET-VKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQ  180 (427)
T ss_dssp             HHHHHHHHHHHHHHHCCTTCSSCGGGSSC-CEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTT
T ss_pred             HHHHHHHHHHHHHhccCCcccccccCCCC-CEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCC
Confidence            9999  588888877  6          8 99999999999999999999999999998642   499999999985 57


Q ss_pred             ccEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHhCCEEEEeccccCCccCCCC--CCccccc----CCCCCeEEEecCcc
Q 021547          185 TAAIVII-NPCNPCGNVLTYQHLQKIAETA-RKLGILVIADEVYGHLAFGSTP--YIPMGVF----GSIVPVITLGSISK  256 (311)
Q Consensus       185 ~~~i~i~-~p~nptG~~~~~~~l~~l~~l~-~~~~~~li~D~ay~~~~~~~~~--~~~~~~~----~~~~~~i~i~s~sK  256 (311)
                      +++++++ +|+||||.+++.+++++|+++| +++|++||+||+|+.+.|++.+  +.++..+    +..+++|+++||||
T Consensus       181 ~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK  260 (427)
T 3ppl_A          181 VKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSK  260 (427)
T ss_dssp             EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTT
T ss_pred             CeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhh
Confidence            8888755 7899999999999999999999 9999999999999998886543  2233332    24568999999999


Q ss_pred             cCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       257 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      . +++|+|+||++++.        ++++.+..... ...++++++|.+++.+|++
T Consensus       261 ~-~~~G~r~G~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  306 (427)
T 3ppl_A          261 I-TLAGAGVSFFLTSA--------ENRKWYTGHAGIRGIGPNKVNQLAHARYFGD  306 (427)
T ss_dssp             T-SCTTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCS
T ss_pred             c-cCcCccEEEEEcCH--------HHHHHHHHHhhcccCCCCHHHHHHHHHHHhC
Confidence            9 89999999999853        47777776643 4568899999999998875

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=100.00  E-value=4.2e-33  Score=252.70  Aligned_cols=231  Identities=19%  Similarity=0.296  Sum_probs=190.5

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE  124 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~  124 (311)
                      +++|+|+.|.+.    +++++.+  +    +  ....+|++. +..++|+++++++      ++++++|++|+|+++++.
T Consensus        29 ~~~i~l~~~~~~----~~~~~~v--a----~--~~~~~Y~~~-~~~~lr~~la~~~------~~~~~~v~~~~G~~~ai~   89 (356)
T 1fg7_A           29 NGDVWLNANEYP----TAVEFQL--T----Q--QTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGIE   89 (356)
T ss_dssp             TCSEECSSCCCS----SCCCCCC--C----C--CCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHHH
T ss_pred             CceEEeeCCCCC----CCCCHhH--h----h--hhhccCCCc-cHHHHHHHHHHHh------CCChHHEEEcCCHHHHHH
Confidence            468999999754    3444444  1    1  234578775 5899999999999      356789999999999999


Q ss_pred             HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547          125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ  204 (311)
Q Consensus       125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~  204 (311)
                      .++.+++++|.|+|+++.|+|..|...++..|.+++.++..  +++.+|++++++.++ +++++++++|+||||.+++.+
T Consensus        90 ~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~  166 (356)
T 1fg7_A           90 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQ  166 (356)
T ss_dssp             HHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHH
Confidence            99999987765799999999999999999999999998865  457799999999888 899999999999999999999


Q ss_pred             HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHH
Q 021547          205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVG  284 (311)
Q Consensus       205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  284 (311)
                      ++++|+++|+ +|+++|+||+|..+.. +.+...  ..+..++++++.|+||.|+++|+|+||++++.        ++++
T Consensus       167 ~l~~l~~~~~-~~~~li~De~~~~~~~-~~~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~~  234 (356)
T 1fg7_A          167 DFRTLLELTR-GKAIVVADEAYIEFCP-QASLAG--WLAEYPHLAILRTLSKAFALAGLRCGFTLANE--------EVIN  234 (356)
T ss_dssp             HHHHHHHHHT-TTCEEEEECTTGGGSG-GGCSGG--GTTTCTTEEEEEESSSTTCCGGGCCEEEEECH--------HHHH
T ss_pred             HHHHHHHhCC-CCCEEEEEccchhhcC-CCcHHH--HHhhCCCEEEEecchHhhcCchhhhEEEEeCH--------HHHH
Confidence            9999999999 9999999999998652 111111  12344678999999999999999999999842        4778


Q ss_pred             HHhhhhccccCCCchhHHHHHhhhhc
Q 021547          285 SIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       285 ~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      .++.... .+++|+++|+++.++|++
T Consensus       235 ~l~~~~~-~~~~~~~~~~a~~~~l~~  259 (356)
T 1fg7_A          235 LLMKVIA-PYPLSTPVADIAAQALSP  259 (356)
T ss_dssp             HHHHHSC-SSCSCHHHHHHHHHHTSH
T ss_pred             HHHHhcC-CCCCCHHHHHHHHHHhcC
Confidence            8877654 347899999999888764

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=100.00  E-value=1.3e-32  Score=250.49  Aligned_cols=241  Identities=17%  Similarity=0.262  Sum_probs=198.8

Q ss_pred             eeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547           47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE  124 (311)
Q Consensus        47 ~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~  124 (311)
                      .|+|+.|.+.    +++++.+.+++.+.+...  ....|++..+ .++|+++++++++.+|.++++++|++|+|+++++.
T Consensus        32 ~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~  106 (369)
T 3cq5_A           32 DIRLNTNENP----YPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ  106 (369)
T ss_dssp             SEECSSCCCC----SCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred             ceeccCCCCC----CCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHH
Confidence            4899999853    568899999999887642  2447877656 79999999999988888888899999999999999


Q ss_pred             HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCH
Q 021547          125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~  203 (311)
                      +++.+++++| |+|+++.|+|.++...++..|.+++.++.+  +++.+|++.+++.+++ +++++++++|+||||.+++.
T Consensus       107 ~~~~~l~~~g-d~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~  183 (369)
T 3cq5_A          107 QLLQAFGGPG-RTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSL  183 (369)
T ss_dssp             HHHHHHCSTT-CEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCH
T ss_pred             HHHHHhcCCC-CEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCH
Confidence            9999999999 999999999999999999999999999853  4567999999998877 88999999999999999995


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC-CeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV-PVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~-~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      +++.   ++|+.+++++|+||+|+.+.++ .+  .+...+..+ +++++.|+||.++++|+|+||++++.        ++
T Consensus       184 ~~l~---~l~~~~~~~li~De~~~~~~~~-~~--~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~  249 (369)
T 3cq5_A          184 DDVE---RIINVAPGIVIVDEAYAEFSPS-PS--ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP--------AF  249 (369)
T ss_dssp             HHHH---HHHHHCSSEEEEECTTGGGCCS-CC--GGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT--------HH
T ss_pred             HHHH---HHHHhCCCEEEEECCchhhcCC-cc--hHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH--------HH
Confidence            5555   5555667999999999987653 11  122223345 78999999999999999999999853        37


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.++.... .+++|+++|+++.++|++
T Consensus       250 ~~~l~~~~~-~~~~~~~~~~a~~~~l~~  276 (369)
T 3cq5_A          250 IDAVMLVRL-PYHLSALSQAAAIVALRH  276 (369)
T ss_dssp             HHHHHTTSC-TTCSCHHHHHHHHHHHHT
T ss_pred             HHHHHHcCC-CCCCCHHHHHHHHHHhcC
Confidence            777776654 346899999999888864

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=100.00  E-value=2.5e-33  Score=267.49  Aligned_cols=235  Identities=14%  Similarity=0.252  Sum_probs=185.9

Q ss_pred             hhHHHHHHHHHhhhccCCCC----CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHH-
Q 021547           26 AAFRYAIVSLMESVDKNDPR----PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL-  100 (311)
Q Consensus        26 ~~i~~~~~~~~~~~~~~~~~----~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l-  100 (311)
                      +.++..+..+.+...+..+.    .+|+|+.|.|.    + +++.+.+++.+.+..   .+|+++.|..++|+++++++ 
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~l~~g~~~----~-~~~~~~~al~~~~~~---~~Y~~~~g~~~lr~~ia~~~~  152 (546)
T 2zy4_A           81 DGIEGRFERYIAENRDQEGVRFLGKSLSYVRDQLG----L-DPAAFLHEMVDGILG---CNYPVPPRMLNISEKIVRQYI  152 (546)
T ss_dssp             TTHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSC----C-CHHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHhcCCCCcchhHHhhhecccCCCC----C-CChHHHHHHHHhhhc---CCCCCCcCCHHHHHHHHHHHH
Confidence            46666665554443211111    28999999864    3 346677777776642   47999889999999977765 


Q ss_pred             hhcCCCCC---CCCCEEEeCChHHHHHHHHHHH-----hcCCCCEEEecCCCCcchHHHHHHc--CcEEEEeeccCCCCc
Q 021547          101 NRDLPYKL---SADDIYITLGCMEAVEIILTVI-----TRLGAANILLPRPGWPFYESFAKRN--HIEVRHFDLLPERGW  170 (311)
Q Consensus       101 ~~~~g~~~---~~~~v~~t~g~~~a~~~~~~~l-----~~~g~d~Vl~~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~~  170 (311)
                      .++++...   .+++|++|+|+++++..++.++     +++| |+|++++|+|+.|...+...  |.+++.++.+.+++|
T Consensus       153 ~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~G-d~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~  231 (546)
T 2zy4_A          153 IREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAG-DKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNW  231 (546)
T ss_dssp             HHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTT-CEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTT
T ss_pred             HHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCC-CEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCC
Confidence            44444322   4689999999999999999884     6899 99999999999998876554  688888887766778


Q ss_pred             ccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHH--HHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547          171 EVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETA--RKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV  248 (311)
Q Consensus       171 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~--~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~  248 (311)
                      .+|++.|++.+.++++++++++|+||||.+++.+++++|+++|  +++|++||+||+|+.+.++   +.++.... .+++
T Consensus       232 ~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~-~~~~  307 (546)
T 2zy4_A          232 QYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC-PENT  307 (546)
T ss_dssp             BCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC-GGGE
T ss_pred             CCCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC-CCCE
Confidence            8999999998888899999999999999999999999999999  7899999999999988753   22333322 3579


Q ss_pred             EEEecCcccCCCCcceeeEEEeeCC
Q 021547          249 ITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       249 i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      |+++||||.||++|+|+||++++++
T Consensus       308 i~~~S~SK~~g~~GlRiG~~~~~~~  332 (546)
T 2zy4_A          308 LLVYSFSKYFGATGWRLGVVAAHQQ  332 (546)
T ss_dssp             EEEEESTTTTTCGGGCEEEEEEESS
T ss_pred             EEEEeCccccCCCCcceEEEEECCH
Confidence            9999999999999999999998764

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=100.00  E-value=1.7e-33  Score=260.71  Aligned_cols=246  Identities=20%  Similarity=0.294  Sum_probs=201.1

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHH--HHHhcC-CCCCC-CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIV--DSVRSS-MFNCY-APMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~--~~~~~~-~~~~Y-~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+|+|+.|.|+.. .++.++.+.+++.  +.+..+ ...+| .+..|.+++|+++++++      ++++++|++|+|++
T Consensus        25 ~~~i~l~~g~p~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~   97 (423)
T 3ez1_A           25 GLNLNMQRGQPADA-DFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL------DVKAENVLVWNNSS   97 (423)
T ss_dssp             TCCEESCCCCCCHH-HHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT------TSCGGGEEECSSCH
T ss_pred             CceEecCCCCCChH-hCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh------CCChhhEEEeCCcH
Confidence            46799999997521 1466777888875  444422 34689 88889999999999999      45788999999999


Q ss_pred             HHHH--HHHHHHhc--C---------CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc--CCCc
Q 021547          121 EAVE--IILTVITR--L---------GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA--DENT  185 (311)
Q Consensus       121 ~a~~--~~~~~l~~--~---------g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l--~~~~  185 (311)
                      +++.  +++.+++.  +         | |+|+++.|+|..+...++..|.+++.+++..+   ++|++.|++.+  .+++
T Consensus        98 ~al~~~~~~~~l~~~~~g~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~  173 (423)
T 3ez1_A           98 LELQGLVLTFALLHGVRGSTGPWLSQT-PKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGTDPSV  173 (423)
T ss_dssp             HHHHHHHHHHHHHTCCTTCSSCGGGGC-CEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHSCTTE
T ss_pred             HHHHHHHHHHHHhccCCCccccccCCC-CEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhhCCCc
Confidence            9998  88899887  7         5 99999999999999999999999999998642   59999999988  5688


Q ss_pred             cEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHhCCEEEEeccccCCccCC---CCCCccccc----CCCCCeEEEecCcc
Q 021547          186 AAIVII-NPCNPCGNVLTYQHLQKIAETA-RKLGILVIADEVYGHLAFGS---TPYIPMGVF----GSIVPVITLGSISK  256 (311)
Q Consensus       186 ~~i~i~-~p~nptG~~~~~~~l~~l~~l~-~~~~~~li~D~ay~~~~~~~---~~~~~~~~~----~~~~~~i~i~s~sK  256 (311)
                      +++++. +|+||||.+++.+++++|+++| +++|++||+||+|..+.|.+   .++.++..+    +..+++|+++|+||
T Consensus       174 ~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  253 (423)
T 3ez1_A          174 KGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSK  253 (423)
T ss_dssp             EEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTT
T ss_pred             eEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchh
Confidence            888654 8899999999999999999999 99999999999999766543   223333322    34568999999999


Q ss_pred             cCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       257 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      . +++|+|+||++++.        ++++.++.... ...++++++|.+++++|++
T Consensus       254 ~-~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  299 (423)
T 3ez1_A          254 I-TFAGAGLGFVASSE--------DNIRWLSKYLGAQSIGPNKVEQARHVKFLTE  299 (423)
T ss_dssp             T-SCSSSSCEEEEECH--------HHHHHHHHHHHHSCSCCCHHHHHHHHHHHHH
T ss_pred             h-ccCCcceEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHHh
Confidence            8 78999999999853        47788777643 4578899999999988864

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=100.00  E-value=1.7e-32  Score=249.91  Aligned_cols=221  Identities=22%  Similarity=0.341  Sum_probs=188.7

Q ss_pred             HHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH
Q 021547           70 AIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE  149 (311)
Q Consensus        70 a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~  149 (311)
                      ++.+.+.... ..|.+..|..++|+++++++.     .+.+++|++|+|+++++.+++.+++++| |+|+++.|+|.++.
T Consensus        47 ~~~~~~~~~~-~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~g-d~Vl~~~~~~~~~~  119 (375)
T 3op7_A           47 DFYKKLQGTK-LNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPG-DHVISLYPTYQQLY  119 (375)
T ss_dssp             HHHHHHHTSC-CSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESSCTHHH
T ss_pred             HHHHHHhcCC-cCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCC-CEEEEeCCCchhHH
Confidence            3444444443 479998999999999999884     3567899999999999999999999999 99999999999999


Q ss_pred             HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 021547          150 SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHL  229 (311)
Q Consensus       150 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~  229 (311)
                      ..++..|.+++.+++...+++.+|++.|++.++++++++++++|+||||.+++.+++++|.++|++||+++|+|++|+.+
T Consensus       120 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~  199 (375)
T 3op7_A          120 DIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSF  199 (375)
T ss_dssp             HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCC
T ss_pred             HHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence            99999999999999876677889999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547          230 AFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  308 (311)
                      .++  +...+..  ..++++++.|+||.++++|+|+||++++.        +++++++.... ...++++++|+++...+
T Consensus       200 ~~~--~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~v~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~l  267 (375)
T 3op7_A          200 SEL--DVPSIIE--VYDKGIAVNSLSKTYSLPGIRIGWVAANH--------QVTDILRDYRDYTMICAGVFDDLVAQLAL  267 (375)
T ss_dssp             SSS--CCCCHHH--HCTTEEEEEESSSSSSCGGGCCEEEECCH--------HHHHHHTTTGGGTTSCCCHHHHHHHHHHH
T ss_pred             ccc--CCCchhh--hcCCEEEEeEChhhcCCcccceEEEEeCH--------HHHHHHHHHHhhhccCCCcHHHHHHHHHH
Confidence            765  2222222  24467999999999999999999999832        48888887754 35677889998888776


Q ss_pred             h
Q 021547          309 V  309 (311)
Q Consensus       309 ~  309 (311)
                      +
T Consensus       268 ~  268 (375)
T 3op7_A          268 A  268 (375)
T ss_dssp             H
T ss_pred             h
Confidence            5

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.3e-31  Score=240.26  Aligned_cols=230  Identities=18%  Similarity=0.204  Sum_probs=189.1

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      ..+++|+|+.+.+    .++++|.+.+++.+....  ...|+ ..|..++|+++++++      ++++++|++|+|++++
T Consensus        14 ~~~~~i~l~~n~~----~~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~lr~~la~~~------~~~~~~i~~t~G~~~~   80 (337)
T 3p1t_A           14 AAAQAVCLAFNEN----PEAVEPRVQAAIAAAAAR--INRYP-FDAEPRVMRKLAEHF------SCPEDNLMLVRGIDEC   80 (337)
T ss_dssp             CCCCCEECSSCCC----CSCCCHHHHHHHHHHGGG--TTSCC-TTHHHHHHHHHHHHH------TSCGGGEEEESHHHHH
T ss_pred             CCCCceEeeCCCC----CCCCCHHHHHHHHHhhhh--hccCC-CCchHHHHHHHHHHh------CcCHHHEEEeCCHHHH
Confidence            4678999999963    267889999999988763  44785 468999999999999      3577899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +.+++.++  +| |+|+++.|+|.++...++..|.+++.++.+  .++.+|++.+++.  .+++++++++|+||||.+++
T Consensus        81 l~~~~~~~--~g-d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~  153 (337)
T 3p1t_A           81 FDRISAEF--SS-MRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALS  153 (337)
T ss_dssp             HHHHHHHS--TT-SEEEEESSSCSHHHHHHTTSCCEEEEECBC--TTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHhc--CC-CeEEEeCCCcHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCC
Confidence            99999998  89 999999999999999999999999999874  4578999999886  46789999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+   ++.++|+++++ +|+||+|+.+.+.+..  .   ....+++++++|+||.|+++|+|+||++++.        ++
T Consensus       154 ~~---~l~~l~~~~~~-~ivDea~~~~~~~~~~--~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~  216 (337)
T 3p1t_A          154 AG---ELDQLRQRAGK-LLIDETYVDYSSFRAR--G---LAYGENELVFRSFSKSYGLAGLRLGALFGPS--------EL  216 (337)
T ss_dssp             HH---HHHHHHHHCSE-EEEECTTGGGSSCSSS--C---CCCBTTEEEEEESSSTTCCTTTCCEEEECCH--------HH
T ss_pred             HH---HHHHHHHhCCc-EEEECCChhhcccccc--c---cccCCCEEEEeeCchhccCcchheEEEEeCH--------HH
Confidence            55   55556677786 6669999986654321  1   1234578999999999999999999999853        47


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.++.... .+++++++|.++.++|++
T Consensus       217 ~~~l~~~~~-~~~~~~~~~~a~~~~l~~  243 (337)
T 3p1t_A          217 IAAMKRKQW-FCNVGTLDLHALEAALDN  243 (337)
T ss_dssp             HHHHHTTSC-TTCSCHHHHHHHHHHHTC
T ss_pred             HHHHHhhcC-CCCCCHHHHHHHHHHhCC
Confidence            777776644 457889999999888864

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=100.00  E-value=3.2e-32  Score=245.86  Aligned_cols=229  Identities=17%  Similarity=0.208  Sum_probs=189.3

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .++++|+|+.+.+.    +++++.+.+++.+.+.  ....|+++.+ .++|+++++++      ++++++|++|+|++++
T Consensus        13 ~g~~~id~~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~g~~~a   79 (350)
T 3fkd_A           13 LSSEIVNFSTTVWT----DGDKDHLEKHLVENLN--CIRHYPEPDA-GTLRQMLAKRN------SVDNNAILVTNGPTAA   79 (350)
T ss_dssp             ---CCEECSCCSCC----CSCCHHHHHHHHHTGG--GGGSCCCTTC-HHHHHHHHHHT------TCCGGGEEEESHHHHH
T ss_pred             ccccEEEccCCCCC----CCCCHHHHHHHHHhHh--HHhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence            46899999999854    6788999999998873  3447887766 89999999998      3577899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeec-cCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL-LPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~  201 (311)
                      +.+++.++.  | |+|+++.|+|..+...++..|.+++.++. +..++  +++        ++++++++++|+||||.++
T Consensus        80 l~~~~~~l~--g-d~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~  146 (350)
T 3fkd_A           80 FYQIAQAFR--G-SRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLL  146 (350)
T ss_dssp             HHHHHHHTT--T-CEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCC
T ss_pred             HHHHHHHHC--C-CEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCC
Confidence            999999998  8 99999999999999999999999999987 43222  332        5789999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      +.+++.+|+++|+++  +||+|++|..+.+++...  ...++..++++++.|+||.++++|+|+||++++.        +
T Consensus       147 ~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~--------~  214 (350)
T 3fkd_A          147 QRTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK--------D  214 (350)
T ss_dssp             CHHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH--------H
T ss_pred             CHHHHHHHHHhCCCC--EEEEECchhhhccCcchh--hHHhhcCCCEEEEecCchhccCcchheEeEEeCH--------H
Confidence            988888888888755  999999999988765432  2344556789999999999999999999999832        4


Q ss_pred             HHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          282 IVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++++.... .+++++++|+++.++|++
T Consensus       215 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~  242 (350)
T 3fkd_A          215 FMKRVAAFST-PWAVNALAIEAAKFILIH  242 (350)
T ss_dssp             HHHHHHTTCC-TTCSCHHHHHHHHHHHHC
T ss_pred             HHHHHHHhCC-CCCCCHHHHHHHHHHHhC
Confidence            7888887765 457899999999998875

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=100.00  E-value=2.4e-32  Score=260.36  Aligned_cols=215  Identities=21%  Similarity=0.351  Sum_probs=181.7

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhc-CC-CCCC-CCCEEEeCChHH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA-PMFGLPLARRAVAEYLNRD-LP-YKLS-ADDIYITLGCME  121 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~-~g-~~~~-~~~v~~t~g~~~  121 (311)
                      .+|+|+.|.|+    ++ ++.+.+++.+.+...   .|. +..|..++|+++++++... .+ +... +++|++|+|+++
T Consensus       104 ~~i~l~~g~~~----~~-~~~~v~a~~~~~~~~---~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~  175 (533)
T 3f6t_A          104 DAVNYCHTELG----LN-RDKVVAEWVNGAVAN---NYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTA  175 (533)
T ss_dssp             HHHHHHHHTTC----CC-HHHHHHHHHHHHHTC---SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHH
T ss_pred             hheeccCCCCC----cC-CcHHHHHHHHHHHhC---CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHH
Confidence            57899999865    33 566666666666532   454 7789999999999999765 34 4454 479999999999


Q ss_pred             HHHHHHHH-----HhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC--CCCcccCHHHHHhhcCCCccEEEEeCCC
Q 021547          122 AVEIILTV-----ITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP--ERGWEVDLEAVEALADENTAAIVIINPC  194 (311)
Q Consensus       122 a~~~~~~~-----l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~i~i~~p~  194 (311)
                      ++..++.+     ++++| |+|+++.|+|.++...++..|.+++.+++..  .+++.+|++.|++.++++++++++++|+
T Consensus       176 al~~~~~~l~~~~l~~~g-d~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~  254 (533)
T 3f6t_A          176 AIVYAFHSLAENHLLKKG-DKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPT  254 (533)
T ss_dssp             HHHHHHHHHHHTTSSCTT-CEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSC
T ss_pred             HHHHHHHHhhhhhccCCc-CEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCC
Confidence            99999998     67899 9999999999999999999999999998765  5678999999999999999999999999


Q ss_pred             CCCccCCCHHHHHHHHHHHH-HhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          195 NPCGNVLTYQHLQKIAETAR-KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       195 nptG~~~~~~~l~~l~~l~~-~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      ||||.+++.+++++|+++|+ +||++||+||+|+.+.++..   ++.... .+++|+++||||.||++|+|+||+++++.
T Consensus       255 NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~---~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~~~  330 (533)
T 3f6t_A          255 NPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFK---SIYSVV-PYNTMLVYSYSKLFGCTGWRLGVIALNEK  330 (533)
T ss_dssp             TTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCC---CHHHHS-GGGEEEEEESHHHHTCGGGCEEEEEEESS
T ss_pred             CCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCcc---CHhhcC-CCCEEEEecCcccCCCcccceEEEEECcH
Confidence            99999999999999999999 68999999999998876432   222222 35889999999999999999999999765

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=100.00  E-value=1.9e-31  Score=241.78  Aligned_cols=234  Identities=18%  Similarity=0.297  Sum_probs=190.5

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      +++++|+|+.|++.    +++++.+.+++.+.+...  ....|+.. +..++|++++++++      +++++|++|+|++
T Consensus        24 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~-~~~~lr~~la~~~g------~~~~~i~~t~g~~   92 (360)
T 3hdo_A           24 DIASWIKLNTNENP----YPPSPEVVKAILEELGPDGAALRIYPSA-SSQKLREVAGELYG------FDPSWIIMANGSD   92 (360)
T ss_dssp             CCTTSEECSSCCCS----SCCCHHHHHHHHHHHTTTCGGGGSCCCS-SCHHHHHHHHHHHT------CCGGGEEEESSHH
T ss_pred             cccceeeccCCCCC----CCCCHHHHHHHHHHHhcccchhhcCCCC-chHHHHHHHHHHhC------cCcceEEEcCCHH
Confidence            45789999999864    678999999999998754  13467654 67999999999993      5778999999999


Q ss_pred             HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547          121 EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV  200 (311)
Q Consensus       121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~  200 (311)
                      +++.+++.+++++| |+|+++.|+|.++...++..|.+++.++.+.  ++.+  +++++.+  +++++++++|+||||.+
T Consensus        93 ~al~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~~--~~~~v~i~~p~nptG~~  165 (360)
T 3hdo_A           93 EVLNNLIRAFAAEG-EEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPERY--EGKVFFLTTPNAPLGPS  165 (360)
T ss_dssp             HHHHHHHHHHCCTT-CEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSSB--CSSEEEEESSCTTTCCC
T ss_pred             HHHHHHHHHHhCCC-CEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhhc--CCCEEEEeCCCCCCCCC
Confidence            99999999999999 9999999999999999999999999998743  3334  4444433  46799999999999999


Q ss_pred             CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      ++   ++++.++|+++|+++|+|++|+.+.  +.....+  .+..++++++.|+||.|+++|+|+||++++.        
T Consensus       166 ~~---~~~l~~l~~~~~~~li~De~~~~~~--~~~~~~~--~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------  230 (360)
T 3hdo_A          166 FP---LEYIDELARRCAGMLVLDETYAEFA--ESNALEL--VRRHENVVVTRTLSKSYSLAGMRIGLAIARP--------  230 (360)
T ss_dssp             CC---HHHHHHHHHHBSSEEEEECTTGGGS--SCCCTHH--HHHCSSEEEEEESTTTTSCTTSCCEEEECCH--------
T ss_pred             cC---HHHHHHHHHHCCCEEEEECChHhhC--CcchhHH--hccCCCEEEEecchHhhcCCccceeeEeeCH--------
Confidence            99   5566777789999999999999863  3332222  2334678999999999999999999999842        


Q ss_pred             hHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          281 GIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++.++.... .+++++++|+++.++|++
T Consensus       231 ~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~  259 (360)
T 3hdo_A          231 EVIAALDKIRD-HYNLDRLAQAACVAALRD  259 (360)
T ss_dssp             HHHHHHHHHSC-SCCSCHHHHHHHHHHHHC
T ss_pred             HHHHHHHHhCC-CCCCCHHHHHHHHHHhcC
Confidence            47888877755 357899999999988864

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=99.98  E-value=1.4e-31  Score=240.48  Aligned_cols=229  Identities=18%  Similarity=0.283  Sum_probs=186.7

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE  124 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~  124 (311)
                      +++|+|+.|.+.    +++++.+.+++.+.+.......|+. .+..++|+++++++.+.   .+++++|++|+|+++++.
T Consensus        19 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~   90 (335)
T 1uu1_A           19 RDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIY   90 (335)
T ss_dssp             CCSEEESSCCCS----SCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHH
T ss_pred             CcceECCCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHH
Confidence            468999999853    5678999999998874333446765 47999999999999643   356789999999999999


Q ss_pred             HHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547          125 IILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ  204 (311)
Q Consensus       125 ~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~  204 (311)
                      .++.++   | |+|+++ |+|.++...++..|.+++.++.+  +++.+|++.+     ++++++++++|+||||.+++.+
T Consensus        91 ~~~~~~---g-d~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~  158 (335)
T 1uu1_A           91 VMMLMF---D-RSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFERE  158 (335)
T ss_dssp             HHHHHS---S-EEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHh---C-CcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHH
Confidence            999998   8 999999 99999999999999999998864  3466787766     5789999999999999999988


Q ss_pred             HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHH
Q 021547          205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVG  284 (311)
Q Consensus       205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  284 (311)
                      ++.+|+++|   | ++|+||+|..+.++  +...  .++..++++++.|+||.|+++|+|+||++++.        ++++
T Consensus       159 ~l~~l~~~~---~-~li~De~~~~~~~~--~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~~  222 (335)
T 1uu1_A          159 EIERILKTG---A-FVALDEAYYEFHGE--SYVD--FLKKYENLAVIRTFSKAFSLAAQRVGYVVASE--------KFID  222 (335)
T ss_dssp             HHHHHHHTT---C-EEEEECTTHHHHCC--CCGG--GGGTCSSEEEEEESTTTTTCGGGCCEEEEECH--------HHHH
T ss_pred             HHHHHHHhC---C-EEEEECcchhhcch--hHHH--HhhhCCCEEEEecchhhcCCcccCeEEEEeCH--------HHHH
Confidence            888888877   8 89999999976532  2222  23345578999999999999999999999842        4777


Q ss_pred             HHhhhhccccCCCchhHHHHHhhhhc
Q 021547          285 SIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       285 ~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++.... .+++|+++|+++.++|++
T Consensus       223 ~l~~~~~-~~~~~~~~~~~~~~~l~~  247 (335)
T 1uu1_A          223 AYNRVRL-PFNVSYVSQMFAKVALDH  247 (335)
T ss_dssp             HHHHHSC-TTCSCHHHHHHHHHHHHT
T ss_pred             HHHHhcC-CCCcCHHHHHHHHHHhCC
Confidence            7776654 358899999999998864

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=99.97  E-value=1.4e-32  Score=252.51  Aligned_cols=232  Identities=18%  Similarity=0.190  Sum_probs=179.7

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHh-c--CCCCCCCCCCCc-----HHHHHHHHHHHhhcCCCCCCC-CCE
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVR-S--SMFNCYAPMFGL-----PLARRAVAEYLNRDLPYKLSA-DDI  113 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~-~--~~~~~Y~~~~g~-----~~lr~~ia~~l~~~~g~~~~~-~~v  113 (311)
                      .++++|+|+.|.|+    ++.++.+.+++.+... .  ....+|++..|.     ++||++++++++ .+|+.+.+ ++|
T Consensus        20 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i   94 (391)
T 3bwn_A           20 MSDFVVNLDHGDPT----AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYI   94 (391)
T ss_dssp             TTTSCEECSSCCCG----GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEE
T ss_pred             CCCCeeEcCCCCCC----CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeE
Confidence            47789999999975    4555666666533322 1  134579999998     999999999998 46777777 599


Q ss_pred             EEeCChHHHHHHHHHHHhcCCCC----EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEE
Q 021547          114 YITLGCMEAVEIILTVITRLGAA----NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIV  189 (311)
Q Consensus       114 ~~t~g~~~a~~~~~~~l~~~g~d----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~  189 (311)
                      ++|+|+++++.+++.+++++| |    +|+++.|+|..|...++..|.+++.++++.+ +  +.        .+++++++
T Consensus        95 ~~t~G~~~al~~~~~~l~~~G-d~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~  162 (391)
T 3bwn_A           95 VVGTGSTQLCQAAVHALSSLA-RSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIEL  162 (391)
T ss_dssp             EEEEHHHHHHHHHHHHHHHTS-SSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEE
T ss_pred             EEeCChHHHHHHHHHHhcCCC-CCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEE
Confidence            999999999999999999999 9    9999999999999999999999988876431 1  11        25789999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      +++|+||||.+++     +|++.++.++++||+|++|..    + ...++..  ..+++|+++||||.|+++|+|+||++
T Consensus       163 l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~-~~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~  230 (391)
T 3bwn_A          163 VTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----P-HYTPITR--RQDHDIMLFTFSKITGHAGSRIGWAL  230 (391)
T ss_dssp             EESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----T-TTSCCCC--CBCCSEEEEEHHHHHSCGGGCEEEEE
T ss_pred             ECCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----C-CCCcccc--CCCCeEEEEechhhcCCCccceEEEE
Confidence            9999999999997     344422223399999999983    1 2223332  34578999999999999999999999


Q ss_pred             eeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          270 TNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +.++       ++++.+..... ...++++++|.+++++|++
T Consensus       231 ~~~~-------~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~  265 (391)
T 3bwn_A          231 VKDK-------EVAKKMVEYIIVNSIGVSKESQVRTAKILNV  265 (391)
T ss_dssp             ECCH-------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred             ecCH-------HHHHHHHHHhcccccCCCHHHHHHHHHHHhC
Confidence            7332       47777777654 3468899999999998864

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=99.97  E-value=3.8e-31  Score=245.61  Aligned_cols=230  Identities=15%  Similarity=0.128  Sum_probs=186.9

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCC-C---cHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF--NCYAPMF-G---LPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~-g---~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      +..+|+|+.|+|.    ++.++.+.+++.+.+.....  ..|.+.. |   .++||++++++++++.+..+++++|++|+
T Consensus        55 ~~~~i~l~~g~~~----~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~  130 (427)
T 2hox_A           55 QGCSADVASGDGL----FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGV  130 (427)
T ss_dssp             TTCCEECCSCCCG----GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEES
T ss_pred             CCceEEecCcCCC----CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeC
Confidence            4578999999975    56678888888877632222  2498887 8   99999999999998777677899999999


Q ss_pred             ChHHHHHHHHHHH--------hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEE
Q 021547          118 GCMEAVEIILTVI--------TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIV  189 (311)
Q Consensus       118 g~~~a~~~~~~~l--------~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~  189 (311)
                      |+++++.+++.+|        +++| |+|+++.|+|..|...++..|.+++.+        .+|++.|++.+++++++++
T Consensus       131 G~~~al~~~~~~l~~~~~~~~~~~G-d~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~~~k~v~  201 (427)
T 2hox_A          131 GVTQLIHGLVISLSPNMTATPDAPE-SKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNPEQYIEM  201 (427)
T ss_dssp             HHHHHHHHHHHHHSCCTTTCTTSCC-EEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGGGEEEE
T ss_pred             CHHHHHHHHHHHHhhccccccCCCC-CEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcCCceEEE
Confidence            9999999999999        8999 999999999999999999999887643        4578889888888899999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      +++|+||||.+++ +.+       +  ++..+.|++|..      ++.++..++ .+++|+++||||.|+++|+|+||++
T Consensus       202 l~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~~~------~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~  264 (427)
T 2hox_A          202 VTSPNNPEGLLRH-AVI-------K--GCKSIYDMVYYW------PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWAL  264 (427)
T ss_dssp             EESSCTTTCCCCC-CSS-------T--TCEEEEECTTCS------TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEE
T ss_pred             EcCCCCCcccccH-HHH-------c--CCCEEEeecccC------CCCCccccC-CCceEEEEeChhcCCCCCceEEEEE
Confidence            9999999999999 422       2  566777777642      223333333 5578999999999999999999999


Q ss_pred             eeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          270 TNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++       +++++++.+.. ...+++.++|.+++++|++
T Consensus       265 ~~~~-------~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~  299 (427)
T 2hox_A          265 IKDE-------SVYNNLLNYMTKNTEGTPRETQLRSLKVLKE  299 (427)
T ss_dssp             ECCH-------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHH
T ss_pred             ECCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHHHhhc
Confidence            8543       47888887754 3468899999999988864

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=99.96  E-value=2.2e-28  Score=224.43  Aligned_cols=237  Identities=15%  Similarity=0.102  Sum_probs=184.6

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      ++++|+|+.|.|   +.+++++.+.+++.+.+...  ....|.+..|..++++++++++.+.+|.    +++++|+|+++
T Consensus        42 g~~~idl~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~v~~~~ggt~  114 (398)
T 3a2b_A           42 GRRVLMFGSNSY---LGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK----EAAILFSTGFQ  114 (398)
T ss_dssp             TEEEEECSCSCT---TCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC----SEEEEESSHHH
T ss_pred             CceEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC----CcEEEECCHHH
Confidence            567899999986   24557899999999887642  2334666678888888888888876663    58999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC----CccEEEEeCCCCCC
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----NTAAIVIINPCNPC  197 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~i~i~~p~npt  197 (311)
                      ++..++.+++++| |.|+++.|+|..+...++..|.+++.++.       +|+++|++.+++    +++++++++|+|||
T Consensus       115 a~~~~~~~~~~~g-d~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~npt  186 (398)
T 3a2b_A          115 SNLGPLSCLMGRN-DYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSME  186 (398)
T ss_dssp             HHHHHHHHSSCTT-CEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTT
T ss_pred             HHHHHHHHHhCCC-CEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCC
Confidence            9999999999999 99999999999999999999999998875       488999988765    78899999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCC-eEEEecCcccCCCCcceeeEEEeeCCCCc
Q 021547          198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-VITLGSISKRWIVPGWRFGWLATNDPNGV  276 (311)
Q Consensus       198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~i~s~sK~~~~~G~r~G~i~~~~~~~~  276 (311)
                      |.+++   +++|.++|+++|+++|+|++|+.+.++.........++..++ +++++|+||.++.+|   ||++++.    
T Consensus       187 G~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~----  256 (398)
T 3a2b_A          187 GDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDA----  256 (398)
T ss_dssp             CCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECH----
T ss_pred             CCccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCH----
Confidence            99998   899999999999999999999987664211111122222234 599999999999888   9998853    


Q ss_pred             cchhhHHHHHhhh-h-ccccCCCchhHHH-HHhhhh
Q 021547          277 LQKSGIVGSIKAC-L-GVRSGPSTLIQVC-EMFLLV  309 (311)
Q Consensus       277 ~~~~~~~~~~~~~-~-~~~~~~~~~~q~~-~~~~l~  309 (311)
                          ++++.++.. . ....+++.+.|.+ +.+.|+
T Consensus       257 ----~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~  288 (398)
T 3a2b_A          257 ----DVIDFLKHNARSVMFSASMTPASVASTLKALE  288 (398)
T ss_dssp             ----HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHhcccceecCCCCHHHHHHHHHHHH
Confidence                467777653 2 1233455666764 445553

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.96  E-value=1.7e-27  Score=219.47  Aligned_cols=223  Identities=16%  Similarity=0.093  Sum_probs=176.9

Q ss_pred             eeecCCCCCCCCCCCCCcHHHHHHHHHHHh----cCCCCCCCCCCCcH---HHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVR----SSMFNCYAPMFGLP---LARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        47 ~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~----~~~~~~Y~~~~g~~---~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      ..+++.++|+    ++.++.+.+++.+..+    ......|+. .|.+   +++++++++++.        +++++++|+
T Consensus        20 ~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g~--------~~~i~~~~g   86 (404)
T 1e5e_A           20 DQFGAAIPPI----YQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEKT--------EACVATSSG   86 (404)
T ss_dssp             CTTCCSSCCC----CCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHTC--------SEEEEESSH
T ss_pred             CCCCCcCCCC----cCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhCC--------CcEEEeCCh
Confidence            3568888876    3444444444444332    222346776 5666   899999999832        478888888


Q ss_pred             HHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCC
Q 021547          120 MEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCN  195 (311)
Q Consensus       120 ~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~n  195 (311)
                      ++++..++.+++++| |+|+++.|.|.++..    .++..|.+++.++..       |++.+++.++++++++++++|+|
T Consensus        87 ~~ai~~~~~~l~~~g-d~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~N  158 (404)
T 1e5e_A           87 MGAIAATVLTILKAG-DHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPAN  158 (404)
T ss_dssp             HHHHHHHHHHHCCTT-CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCT
T ss_pred             HHHHHHHHHHHhCCC-CEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCC
Confidence            999999999999999 999999999999887    788899999998763       78899999998999999999999


Q ss_pred             CCccCCCHHHHHHHHHHHHH-hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCccee-eEEEeeCC
Q 021547          196 PCGNVLTYQHLQKIAETARK-LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDP  273 (311)
Q Consensus       196 ptG~~~~~~~l~~l~~l~~~-~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~  273 (311)
                      |||.+++   +++|+++|++ +|+++|+|++|..+.+.    .++ .+   ++++++.|+||.|+++|+|+ ||+++++ 
T Consensus       159 ptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~----~~~-~~---~~di~~~S~sK~~~~~g~ri~G~~~~~~-  226 (404)
T 1e5e_A          159 PTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT----NPV-DF---GVDVVVHSATKYINGHTDVVAGLICGKA-  226 (404)
T ss_dssp             TTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC----CGG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH-
T ss_pred             CCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC----Ccc-cc---CCEEEEEcCccccCCCCCCeEEEEEECH-
Confidence            9999998   9999999999 99999999999987653    122 12   36699999999999999998 9999864 


Q ss_pred             CCccchhhHHH-HHhhhhcc--ccCCCchhHHHHHhhhh
Q 021547          274 NGVLQKSGIVG-SIKACLGV--RSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       274 ~~~~~~~~~~~-~~~~~~~~--~~~~~~~~q~~~~~~l~  309 (311)
                             ++++ +++.....  +.+++++.|+++.+.++
T Consensus       227 -------~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~  258 (404)
T 1e5e_A          227 -------DLLQQIRMVGIKDITGSVISPHDAWLITRGLS  258 (404)
T ss_dssp             -------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHT
T ss_pred             -------HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHh
Confidence                   3566 77766443  45688889988877765

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=99.95  E-value=6.2e-27  Score=215.74  Aligned_cols=213  Identities=17%  Similarity=0.217  Sum_probs=171.7

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC------CCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM------FNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYI  115 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~------~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~  115 (311)
                      ++++|+|+.|.+.     +.++.+.+++.+.+....      ...|++  ..+..++|+++++++...     +++++++
T Consensus        26 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~   95 (420)
T 1t3i_A           26 GHPLVYLDNAATS-----QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINAR-----SPREIVY   95 (420)
T ss_dssp             TEECEECBTTTCC-----CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCS-----CGGGEEE
T ss_pred             CCceEEecCCccC-----CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCC-----CCCeEEE
Confidence            3558999999853     567899999998886421      123443  356788999999998421     5689999


Q ss_pred             eCChHHHHHHHHHHH----hcCCCCEEEecCCCCcc----hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547          116 TLGCMEAVEIILTVI----TRLGAANILLPRPGWPF----YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA  187 (311)
Q Consensus       116 t~g~~~a~~~~~~~l----~~~g~d~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  187 (311)
                      |+|+++++.+++.++    +++| |+|+++.|+|..    +...++..|.+++.++.+  .++.+|++++++.+++++++
T Consensus        96 ~~g~t~a~~~~~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~  172 (420)
T 1t3i_A           96 TRNATEAINLVAYSWGMNNLKAG-DEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKL  172 (420)
T ss_dssp             ESSHHHHHHHHHHHTHHHHCCTT-CEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEE
T ss_pred             cCChHHHHHHHHHHhhhcccCCC-CEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCceE
Confidence            999999999999999    8899 999999999998    567778899999999875  45679999999999989999


Q ss_pred             EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeE
Q 021547          188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW  267 (311)
Q Consensus       188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~  267 (311)
                      +++++|+||||.+++   +++|.++|+++|+++|+|++|+....    ...+..+   +..+++.|+||.++.+|  +||
T Consensus       173 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~~---~~di~~~s~sK~~~~~g--~G~  240 (420)
T 1t3i_A          173 VTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHY----PLDVQLI---DCDWLVASGHKMCAPTG--IGF  240 (420)
T ss_dssp             EEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHH---TCSEEEEEGGGTTSCTT--CEE
T ss_pred             EEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCc----cCchhhc---CCCEEEEehhhhcCCCc--eEE
Confidence            999999999999999   89999999999999999999986321    1122222   24589999999988777  999


Q ss_pred             EEeeCCCCccchhhHHHHHhhh
Q 021547          268 LATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       268 i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      ++++.        +++++++..
T Consensus       241 ~~~~~--------~~~~~~~~~  254 (420)
T 1t3i_A          241 LYGKE--------EILEAMPPF  254 (420)
T ss_dssp             EEECH--------HHHHHSCCC
T ss_pred             EEEch--------HHHhhcCce
Confidence            99853        466776654

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.95  E-value=2.8e-27  Score=214.68  Aligned_cols=205  Identities=13%  Similarity=0.113  Sum_probs=161.4

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCcHHHHHH-HHHHHhhcCCCCCCCCCEE
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--------FNCYAPMFGLPLARRA-VAEYLNRDLPYKLSADDIY  114 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~-ia~~l~~~~g~~~~~~~v~  114 (311)
                      .+++++|+.|.+    ..++++.+.+++.+.+....        ...|.+..+..++|++ +++++..      +  +|+
T Consensus         6 ~~~~i~ld~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~------~--~v~   73 (371)
T 2e7j_A            6 TKDFINIDPLQT----GGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGC------D--VAR   73 (371)
T ss_dssp             --CCEECCHHHH----TCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTS------S--EEE
T ss_pred             CCCcEEeccccc----CCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCC------C--EEE
Confidence            567899998653    24678999999998775421        1235567789999999 9999842      2  899


Q ss_pred             EeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-----CCccEEE
Q 021547          115 ITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-----ENTAAIV  189 (311)
Q Consensus       115 ~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-----~~~~~i~  189 (311)
                      +|+|+++++.+++.+++++| |+|+++.|+|.++...++..|.+++.++.....++.+|+++|++.++     +++++++
T Consensus        74 ~~~g~t~a~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~  152 (371)
T 2e7j_A           74 VTNGAREAKFAVMHSLAKKD-AWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLAL  152 (371)
T ss_dssp             EESSHHHHHHHHHHHHCCTT-CEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEE
T ss_pred             EeCChHHHHHHHHHHHhCCC-CEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEE
Confidence            99999999999999999999 99999999999999999999999999983222457899999999887     6899999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      +++|+||||.+++   +++|.++|+++|+++|+|++|+.....    ..+..++   ..+++.|+||.++.++ |+||++
T Consensus       153 ~~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~---~di~~~s~sK~~~~~~-~~G~~~  221 (371)
T 2e7j_A          153 ITYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEIG---ADFIVGSGHKSMAASG-PIGVMG  221 (371)
T ss_dssp             EESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHHT---CSEEEEEHHHHSSCCS-SCEEEE
T ss_pred             EECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC----CChhhcC---CCEEEecCCcCCCCCC-CcEEEE
Confidence            9999999999999   799999999999999999999975421    1222222   3399999999877654 999999


Q ss_pred             eeC
Q 021547          270 TND  272 (311)
Q Consensus       270 ~~~  272 (311)
                      +++
T Consensus       222 ~~~  224 (371)
T 2e7j_A          222 MKE  224 (371)
T ss_dssp             ECT
T ss_pred             Eec
Confidence            865

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=99.94  E-value=6.4e-26  Score=206.98  Aligned_cols=230  Identities=12%  Similarity=0.068  Sum_probs=173.5

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc-CC---CCCC--CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS-SM---FNCY--APMFGLPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~-~~---~~~Y--~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      +..++||+.|.+   +.+++++.+.+++.+.+.. +.   ...|  ....+..++|+++++++.      ++  +.++++
T Consensus        38 g~~~id~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~--~~i~~~  106 (384)
T 1bs0_A           38 DRQYLNFSSNDY---LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG------YS--RALLFI  106 (384)
T ss_dssp             TEEEEECSCCCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT------CS--EEEEES
T ss_pred             CceEEEeeccCc---cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC------CC--cEEEeC
Confidence            567899999874   2356789999999998764 21   1123  444678899999999983      22  345555


Q ss_pred             ChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCC
Q 021547          118 GCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPC  194 (311)
Q Consensus       118 g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~  194 (311)
                      +|++++..++.++.++| |.|+++.|+|..+...++..|.+++.++.       .|+++|++.+++   +++++++++|+
T Consensus       107 sGt~a~~~~~~~~~~~g-d~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~  178 (384)
T 1bs0_A          107 SGFAANQAVIAAMMAKE-DRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVF  178 (384)
T ss_dssp             CHHHHHHHHHHHHCCTT-CEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBC
T ss_pred             CcHHHHHHHHHHhCCCC-cEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            55899999999999999 99999999999999999999999998874       478899887764   36788888999


Q ss_pred             CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      ||||.+++   +++|.++|+++|+++|+|++|+.+.++  +....  ..++. ...++++|+||.++.+|   ||++++.
T Consensus       179 nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~--~~~~~-~~di~~~s~sK~~~~~G---G~~~~~~  249 (384)
T 1bs0_A          179 SMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSC--WLQKV-KPELLVVTFGKGFGVSG---AAVLCSS  249 (384)
T ss_dssp             TTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHH--HHTTC-CCSEEEEESSSTTSSCC---EEEEECH
T ss_pred             CCCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchH--HhcCC-CCcEEEeeccchhhccC---cEEEeCH
Confidence            99999999   899999999999999999999875542  22211  22221 23399999999998777   9999852


Q ss_pred             CCCccchhhHHHHHhhhh---ccccCCCchhHHHHHhhhh
Q 021547          273 PNGVLQKSGIVGSIKACL---GVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~  309 (311)
                              ++++.++...   ..+.+++++.|+++.+.|+
T Consensus       250 --------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~  281 (384)
T 1bs0_A          250 --------TVADYLLQFARHLIYSTSMPPAQAQALRASLA  281 (384)
T ss_dssp             --------HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHH
T ss_pred             --------HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHH
Confidence                    3666666532   1233678888887666553

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=99.94  E-value=3.7e-26  Score=207.98  Aligned_cols=230  Identities=17%  Similarity=0.111  Sum_probs=174.7

Q ss_pred             eecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN-------CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~-------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      +.|+.+..     .++++.+.+++.+.+......       .|....+..++|++++++++      +++++|++|+|++
T Consensus         3 ~yld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~~~g~t   71 (384)
T 1eg5_A            3 VYFDNNAT-----TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLG------VSPSEIFFTSCAT   71 (384)
T ss_dssp             EECBTTTC-----CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHT------SCGGGEEEESCHH
T ss_pred             EEEecCcc-----CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcC------CCCCeEEEECCHH
Confidence            55666652     367899999999988642100       02223456889999999993      4667999999999


Q ss_pred             HHHHHHHHHHh----cCCCCEEEecCCCCcchHHHH---HHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC
Q 021547          121 EAVEIILTVIT----RLGAANILLPRPGWPFYESFA---KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP  193 (311)
Q Consensus       121 ~a~~~~~~~l~----~~g~d~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p  193 (311)
                      +++.+++.++.    ++| |+|+++.|+|+++...+   +..|.+++.++.+  .++.+|+++|++.++++++++++++|
T Consensus        72 ~a~~~~~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~  148 (384)
T 1eg5_A           72 ESINWILKTVAETFEKRK-RTIITTPIEHKAVLETMKYLSMKGFKVKYVPVD--SRGVVKLEELEKLVDEDTFLVSIMAA  148 (384)
T ss_dssp             HHHHHHHHHHHHHTTTTC-CEEEECTTSCHHHHHHHHHHHHTTCEEEECCBC--TTSCBCHHHHHHHCCTTEEEEEEESB
T ss_pred             HHHHHHHHhhhhhccCCC-CEEEECCCCchHHHHHHHHHHhcCCEEEEEccC--CCCccCHHHHHHHhCCCCeEEEEECC
Confidence            99999999998    789 99999999999876655   7789999999875  35679999999999889999999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHhC--CEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          194 CNPCGNVLTYQHLQKIAETARKLG--ILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       194 ~nptG~~~~~~~l~~l~~l~~~~~--~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      +||||.+++   +++|.++|+++|  ++||+|++|+.   +.. +..+..   .+..+++.|+||.++.+|  +||++++
T Consensus       149 ~nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~~---~~~-~~~~~~---~~~di~~~s~sK~~g~~G--~G~~~~~  216 (384)
T 1eg5_A          149 NNEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQTI---GKI-PFSLEK---LEVDYASFSAHKFHGPKG--VGITYIR  216 (384)
T ss_dssp             CTTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTTT---TTS-CCCCTT---TCCSEEEEEGGGGTSCTT--CEEEEEC
T ss_pred             CCCcccccC---HHHHHHHHHhcCCceEEEEEhhhhc---CCc-ccCchh---cCCCEEEecHHHhcCCCc--eEEEEEc
Confidence            999999999   899999999999  99999999983   221 122222   235699999999988888  7999986


Q ss_pred             CCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547          272 DPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +.. .     +...+...    ....++++.++|+++.+.|+
T Consensus       217 ~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~  252 (384)
T 1eg5_A          217 KGV-P-----IRPLIHGGGQERGLRSGTQNVPGIVGAARAME  252 (384)
T ss_dssp             TTS-C-----CCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHH
T ss_pred             CCC-c-----cccccccCcccccccCCCCChHHHHHHHHHHH
Confidence            531 0     11111111    11245778888988877765

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.94  E-value=1.9e-26  Score=210.98  Aligned_cols=219  Identities=14%  Similarity=0.090  Sum_probs=174.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHHHHHHHHHHhcCCCCEEE
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAVEIILTVITRLGAANIL  139 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~~~~~~~l~~~g~d~Vl  139 (311)
                      .+.++.+.+++.+.+..    .|++  ...++++.+++++.+.+|.  +++ ++++|+|+++++..++.+++++| |+|+
T Consensus        43 ~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~--~~~~~v~~t~g~t~al~~~~~~~~~~g-d~Vl  113 (393)
T 1vjo_A           43 SNAHPSVLQAMNVSPVG----HLDP--AFLALMDEIQSLLRYVWQT--ENPLTIAVSGTGTAAMEATIANAVEPG-DVVL  113 (393)
T ss_dssp             CCCCHHHHHHHSSCCCC----TTSH--HHHHHHHHHHHHHHHHHTC--CCSCEEEESSCHHHHHHHHHHHHCCTT-CEEE
T ss_pred             CCCCHHHHHHHhccccc----ccCH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEeCchHHHHHHHHHhccCCC-CEEE
Confidence            35678888888765532    4544  2567888888888877664  456 89999999999999999999999 9999


Q ss_pred             ecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh
Q 021547          140 LPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKL  216 (311)
Q Consensus       140 ~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~  216 (311)
                      ++.|+|.+  +...++..|.+++.++.+.  ++.+|++.|++.+++ +++++++++|+||||.+++   +++|.++|+++
T Consensus       114 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~  188 (393)
T 1vjo_A          114 IGVAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREF  188 (393)
T ss_dssp             EEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHH
T ss_pred             EEcCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHc
Confidence            99999998  8899999999999998753  467899999999887 8999999999999999998   89999999999


Q ss_pred             CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh----h--
Q 021547          217 GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC----L--  290 (311)
Q Consensus       217 ~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----~--  290 (311)
                      |+++|+|++|+.   +. ....+   ...++.+++.|+||.++.+| |+||+++++        ++++.++..    .  
T Consensus       189 ~~~li~Dea~~~---g~-~~~~~---~~~~~di~~~s~sK~l~~~~-~~G~l~~~~--------~~~~~~~~~~~~~~~~  252 (393)
T 1vjo_A          189 GTLLLVDTVTSL---GG-VPIFL---DAWGVDLAYSCSQKGLGCSP-GASPFTMSS--------RAIEKLQRRRTKVANW  252 (393)
T ss_dssp             TCEEEEECTTTT---TT-SCCCT---TTTTCSEEECCSSSTTCSCS-SCEEEEECH--------HHHHHHHTCSSCCSCS
T ss_pred             CCEEEEECCccc---cC-cCCcc---cccCccEEEEcCcccccCCC-ceEEEEECH--------HHHHHHhccCCCCCce
Confidence            999999999993   21 11222   22345699999999999888 999999854        366666321    0  


Q ss_pred             --------------cccc-CCCchhHHHHHhhhh
Q 021547          291 --------------GVRS-GPSTLIQVCEMFLLV  309 (311)
Q Consensus       291 --------------~~~~-~~~~~~q~~~~~~l~  309 (311)
                                    .... ++++++|+++.+.|+
T Consensus       253 ~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~  286 (393)
T 1vjo_A          253 YLDMNLLGKYWGSERVYHHTAPINLYYALREALR  286 (393)
T ss_dssp             TTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHH
T ss_pred             ecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHH
Confidence                          1122 678888988887765

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.94  E-value=1.2e-25  Score=206.49  Aligned_cols=227  Identities=15%  Similarity=0.111  Sum_probs=168.5

Q ss_pred             eecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHH
Q 021547           48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA--PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEI  125 (311)
Q Consensus        48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~  125 (311)
                      -.++.++|+........+.+.+++...........|.  +..+..++++.+++++.      .  +++++++++++++..
T Consensus        23 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~--~~~i~~~sG~~a~~~   94 (398)
T 2rfv_A           23 STGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLER------G--EAGLATASGISAITT   94 (398)
T ss_dssp             TTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHH
T ss_pred             CCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhC------C--CcEEEECCHHHHHHH
Confidence            3577787764433444455555544211111122343  33456778888888773      1  256666667799999


Q ss_pred             HHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547          126 ILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       126 ~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~  201 (311)
                      ++.+++++| |+|+++.|.|.++...+    +..|.+++.++..       |++++++.++++++++++++|+||||.++
T Consensus        95 ~l~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~  166 (398)
T 2rfv_A           95 TLLTLCQQG-DHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPTLSLV  166 (398)
T ss_dssp             HHHHHCCTT-CEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTTTBCC
T ss_pred             HHHHHhCCC-CEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCccc
Confidence            999999999 99999999999887765    8889999988762       89999999998999999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchh
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKS  280 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~  280 (311)
                      +   +++|.++|+++|+++|+|++|+...+..    ++ .+   +.++++.|+||.|+++|+|+ ||+++++        
T Consensus       167 ~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~~---~~di~~~s~sK~~~~~g~~~~G~~~~~~--------  227 (398)
T 2rfv_A          167 D---IETVAGIAHQQGALLVVDNTFMSPYCQQ----PL-QL---GADIVVHSVTKYINGHGDVIGGIIVGKQ--------  227 (398)
T ss_dssp             C---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH--------
T ss_pred             C---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh---CCcEEEEeCcccccCCCCceEEEEEECH--------
Confidence            8   9999999999999999999999765431    12 12   35599999999999999999 9998854        


Q ss_pred             hHHH-HHhhhhc-c-ccCCCchhHHHHHhhhh
Q 021547          281 GIVG-SIKACLG-V-RSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       281 ~~~~-~~~~~~~-~-~~~~~~~~q~~~~~~l~  309 (311)
                      ++++ .++.... . +.+.+++.|+++.+.++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  259 (398)
T 2rfv_A          228 EFIDQARFVGLKDITGGCMSPFNAWLTLRGVK  259 (398)
T ss_dssp             HHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhh
Confidence            3454 5554432 3 45778888988877765

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.94  E-value=6.1e-26  Score=207.84  Aligned_cols=234  Identities=13%  Similarity=0.071  Sum_probs=170.6

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC----CCC--CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM----FNC--YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~----~~~--Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      ++++|+|+.++|.   .+..++.+.+++.+.+....    ...  |....+..++|+.+++++..       .+.++++ 
T Consensus        42 g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-------~~~i~~~-  110 (399)
T 3tqx_A           42 EKEVLNFCANNYL---GLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGT-------DDTILYS-  110 (399)
T ss_dssp             TEEEEECSSCCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTC-------SEEEEES-
T ss_pred             CeeEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCC-------CcEEEEC-
Confidence            3568999999642   34578999999988876411    111  22333468899999998842       2345555 


Q ss_pred             ChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEe
Q 021547          118 GCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVII  191 (311)
Q Consensus       118 g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~  191 (311)
                      +|++++..++.+++++| |.|+++.|+|..+...++..|.+++.++.       .|++.+++.+++      ++++++++
T Consensus       111 sGt~a~~~~l~~~~~~g-d~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~  182 (399)
T 3tqx_A          111 SCFDANGGLFETLLGPE-DAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATD  182 (399)
T ss_dssp             CHHHHHHTTHHHHCCTT-CEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEE
T ss_pred             chHHHHHHHHHHhcCCC-CEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEe
Confidence            55789999999999999 99999999999999999999999998875       367788887764      78999999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      +|+||||.+++   +++|.++|+++|+++|+|++|+...++..........+ ...+.++++|+||.++  |++.||+++
T Consensus       183 ~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~  257 (399)
T 3tqx_A          183 GVFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSG  257 (399)
T ss_dssp             SEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEE
T ss_pred             CCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEc
Confidence            99999999999   99999999999999999999974333221111122222 1235699999999987  445599988


Q ss_pred             eCCCCccchhhHHHHHhhhh---ccccCCCchhHHHHHhhhh
Q 021547          271 NDPNGVLQKSGIVGSIKACL---GVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~  309 (311)
                      +.        ++++.+....   ..+...+++.++++.+.++
T Consensus       258 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  291 (399)
T 3tqx_A          258 HK--------EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLE  291 (399)
T ss_dssp             CH--------HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHH
T ss_pred             CH--------HHHHHHHHhCcceeccCCCcHHHHHHHHHHHH
Confidence            53        4667766542   1234566676666665554

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.94  E-value=1.6e-25  Score=204.10  Aligned_cols=219  Identities=15%  Similarity=0.082  Sum_probs=172.2

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec
Q 021547           62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLP  141 (311)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~  141 (311)
                      +.++.+.+++.+.+.    ..|++  ...++++.+++++.+.+|.+ +++++++|+|+++++..++.+++++| |+|+++
T Consensus        30 ~~~~~v~~a~~~~~~----~~~~~--~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~g-d~vl~~  101 (386)
T 2dr1_A           30 ACFPEVLEIMKVQMF----SHRSK--EYRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKG-GKVLVT  101 (386)
T ss_dssp             CCCHHHHHHTTSCCC----CTTSH--HHHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTT-CEEEEE
T ss_pred             CCcHHHHHHHhcccc----cccCH--HHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCC-CeEEEE
Confidence            557788887765543    24543  23678888888888877765 46789999999999999999999999 999999


Q ss_pred             CCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc--CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC
Q 021547          142 RPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA--DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG  217 (311)
Q Consensus       142 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l--~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~  217 (311)
                      .|+|.+  +...++..|.+++.++.+.  ++.+|++.|++.+  .++++++++++|+||||.+.+   +++|.++|+++|
T Consensus       102 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~  176 (386)
T 2dr1_A          102 IIGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHD  176 (386)
T ss_dssp             ESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTT
T ss_pred             cCCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcC
Confidence            999998  8889999999999998753  5678999999988  568999999999999999998   899999999999


Q ss_pred             CEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHh----------
Q 021547          218 ILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIK----------  287 (311)
Q Consensus       218 ~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~----------  287 (311)
                      +++|+|++|+...+.    ..+.   ..++++++.|+||.++.++ ++||+++++        ++++.++          
T Consensus       177 ~~li~D~a~~~~~~~----~~~~---~~~~di~~~s~sK~~~~~~-g~G~~~~~~--------~~~~~~~~~~~~~~~~~  240 (386)
T 2dr1_A          177 KLVFVDAVSAMGGAD----IKFD---KWGLDVVFSSSQKAFGVPP-GLAIGAFSE--------RFLEIAEKMPERGWYFD  240 (386)
T ss_dssp             CEEEEECTTTBTTBC----CCTT---TTTCSEEEEETTSTTCCCS-SCEEEEECH--------HHHHHHTTCTTCCSTTC
T ss_pred             CeEEEEccccccCcc----cccc---ccCCcEEEEeccccccCCC-ceEEEEECH--------HHHHHHhcCCCCceEEe
Confidence            999999999975431    1222   2235699999999988763 399999864        3555542          


Q ss_pred             ------hh---hccccCCCchhHHHHHhhhh
Q 021547          288 ------AC---LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       288 ------~~---~~~~~~~~~~~q~~~~~~l~  309 (311)
                            ..   ....+++++++|+++.+.|+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  271 (386)
T 2dr1_A          241 IPLYVKYLKEKESTPSTPPMPQVFGINVALR  271 (386)
T ss_dssp             HHHHHHHHHHHSSCSSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Confidence                  11   12245678888988877764

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=99.94  E-value=3.6e-26  Score=209.59  Aligned_cols=213  Identities=18%  Similarity=0.211  Sum_probs=168.9

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCC------CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNC------YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI  115 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~------Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~  115 (311)
                      ++++++|+.+.+.     +.++.+.+++.+.+....  ...      |.+..+..++|+++++++...     ++++|++
T Consensus        21 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~   90 (406)
T 1kmj_A           21 GLPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINAR-----SAEELVF   90 (406)
T ss_dssp             TEECEECCTTTCC-----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCS-----CGGGEEE
T ss_pred             CCceEEecCCccC-----CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCC-----CCCeEEE
Confidence            4578999999853     467899999999886431  111      223456788999999988421     4689999


Q ss_pred             eCChHHHHHHHHHHH----hcCCCCEEEecCCCCcch----HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547          116 TLGCMEAVEIILTVI----TRLGAANILLPRPGWPFY----ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA  187 (311)
Q Consensus       116 t~g~~~a~~~~~~~l----~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  187 (311)
                      |+|+++++.+++.++    +++| |+|+++.|+|.+.    ...++..|.+++.++..  .++.+|++.|++.+++++++
T Consensus        91 ~~g~t~a~~~~~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~l~~~~~~  167 (406)
T 1kmj_A           91 VRGTTEGINLVANSWGNSNVRAG-DNIIISQMEHHANIVPWQMLCARVGAELRVIPLN--PDGTLQLETLPTLFDEKTRL  167 (406)
T ss_dssp             ESSHHHHHHHHHHHTHHHHCCTT-CEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBC--TTSCBCGGGHHHHCCTTEEE
T ss_pred             eCChhHHHHHHHHHhhhhcCCCC-CEEEEecccchHHHHHHHHHHHhCCCEEEEEecC--CCCCcCHHHHHHHhccCCeE
Confidence            999999999999999    7899 9999999998753    45577789999999875  35678999999999989999


Q ss_pred             EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeE
Q 021547          188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW  267 (311)
Q Consensus       188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~  267 (311)
                      +++++|+||||.+++   +++|.++|+++|+++|+|++|+...    ....+..   .++++++.|+||.++.+|  +||
T Consensus       168 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~----~~~~~~~---~~~d~~~~s~~K~~g~~G--~G~  235 (406)
T 1kmj_A          168 LAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMH----HPVDVQA---LDCDFYVFSGHKLYGPTG--IGI  235 (406)
T ss_dssp             EEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTT----SCCCHHH---HTCSEEEEEGGGTTSCTT--CEE
T ss_pred             EEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCC----CCCcccc---cCCCEEEEEchhccCCCC--cEE
Confidence            999999999999999   9999999999999999999998632    1112222   235699999999998888  899


Q ss_pred             EEeeCCCCccchhhHHHHHhhh
Q 021547          268 LATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       268 i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      ++++.        +++++++..
T Consensus       236 ~~~~~--------~~~~~~~~~  249 (406)
T 1kmj_A          236 LYVKE--------ALLQEMPPW  249 (406)
T ss_dssp             EEECH--------HHHHHCCCS
T ss_pred             EEEeH--------HHHhhcCCc
Confidence            99853        466666543

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.94  E-value=2.2e-26  Score=210.03  Aligned_cols=205  Identities=18%  Similarity=0.095  Sum_probs=163.3

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CC-----CCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-FN-----CYAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-~~-----~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      +++++|+.+.+     .+.++.+.+++.+.+.... ..     .|.. ..+..++|+++++++.      +++++|++|+
T Consensus        15 ~~~i~l~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g------~~~~~v~~~~   83 (390)
T 1elu_A           15 ANKTYFNFGGQ-----GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFN------VDPNTITITD   83 (390)
T ss_dssp             TTSEECCTTTC-----CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTT------SCGGGEEEES
T ss_pred             CCeEEecCCcc-----CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcC------CCHHHEEEeC
Confidence            46799998863     3567889999988876321 00     2433 3577899999999983      4667999999


Q ss_pred             ChHHHHHHHHHHH-hcCCCCEEEecCCCCcchHHH----HHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC
Q 021547          118 GCMEAVEIILTVI-TRLGAANILLPRPGWPFYESF----AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN  192 (311)
Q Consensus       118 g~~~a~~~~~~~l-~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~  192 (311)
                      |+++++.+++.++ .++| |+|+++.|+|..+...    ++..|.+++.++....+++.+|++.|++.++++++++++++
T Consensus        84 g~t~a~~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~  162 (390)
T 1elu_A           84 NVTTGCDIVLWGLDWHQG-DEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSH  162 (390)
T ss_dssp             SHHHHHHHHHHHSCCCTT-CEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEES
T ss_pred             ChHHHHHHHHhCCCCCCC-CEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEec
Confidence            9999999999999 7899 9999999999987643    56789999999875435678999999999988999999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHH----HhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547          193 PCNPCGNVLTYQHLQKIAETAR----KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL  268 (311)
Q Consensus       193 p~nptG~~~~~~~l~~l~~l~~----~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i  268 (311)
                      |+||||.+++   +++|.++|+    ++|+++|+|++|+...    ....+   ...+..+++.|+||. ...|.++||+
T Consensus       163 ~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~----~~~~~---~~~~~d~~~~s~~K~-~~~~~g~G~~  231 (390)
T 1elu_A          163 LLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGS----LPLDF---SRLEVDYYAFTGHKW-FAGPAGVGGL  231 (390)
T ss_dssp             BCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTT----BCCCT---TTSCCSEEEEESSST-TCCCTTCEEE
T ss_pred             cccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCC----cCCCh---hhcCCCEEEcccccc-ccCCCceEEE
Confidence            9999999999   899999999    9999999999998421    11122   223355999999994 4556779999


Q ss_pred             EeeC
Q 021547          269 ATND  272 (311)
Q Consensus       269 ~~~~  272 (311)
                      ++++
T Consensus       232 ~~~~  235 (390)
T 1elu_A          232 YIHG  235 (390)
T ss_dssp             EECT
T ss_pred             EECH
Confidence            9864

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.94  E-value=3.9e-26  Score=209.84  Aligned_cols=236  Identities=18%  Similarity=0.197  Sum_probs=172.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF--NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      +++.++||+.+.+..+.++ .+|.+.+++.+.+.....  ..| +.....++++.+++++    |    .+++++|+|++
T Consensus        37 ~g~~~lD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~----~~~v~~~~gg~  106 (406)
T 4adb_A           37 QGKEYIDFAGGIAVNALGH-AHPELREALNEQASKFWHTGNGY-TNEPVLRLAKKLIDAT----F----ADRVFFCNSGA  106 (406)
T ss_dssp             TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTS-CCHHHHHHHHHHHHHS----S----CSEEEEESSHH
T ss_pred             CCCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhcccccCCc-CCHHHHHHHHHHHhhC----C----CCeEEEeCcHH
Confidence            4678899998832212223 578999999998864321  122 2223445555555554    3    45899999999


Q ss_pred             HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcCc-------------EEEEeeccCCCCcccCHHHHHhh
Q 021547          121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRNHI-------------EVRHFDLLPERGWEVDLEAVEAL  180 (311)
Q Consensus       121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~  180 (311)
                      +++..++.++..       +|.|+|++.+|+|+++...+...+.             ++..++.       .|+++|++.
T Consensus       107 ~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  179 (406)
T 4adb_A          107 EANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASAL  179 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHH
Confidence            999999998865       5548999999999988554444443             2333322       389999999


Q ss_pred             cCCCccEEEEeCCCCCCccCC--CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC
Q 021547          181 ADENTAAIVIINPCNPCGNVL--TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW  258 (311)
Q Consensus       181 l~~~~~~i~i~~p~nptG~~~--~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~  258 (311)
                      +++++++++++ |+||+|.++  +.+++++|.++|++||++||+||+|.++.+.|... .+..++...+++   ++||.+
T Consensus       180 l~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~~  254 (406)
T 4adb_A          180 IDDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDLL---TTAKAL  254 (406)
T ss_dssp             CSTTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGG
T ss_pred             hcCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhcCCCCCEE---Eechhh
Confidence            99888888888 999999988  99999999999999999999999999877665432 222333333444   679999


Q ss_pred             CCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          259 IVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       259 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      + +|+|+||++++.        ++++.+... ...++++++++|+++.+.|+
T Consensus       255 ~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  297 (406)
T 4adb_A          255 G-GGFPVGALLATE--------ECARVMTVGTHGTTYGGNPLASAVAGKVLE  297 (406)
T ss_dssp             G-TTSCCEEEEECH--------HHHHTCCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred             c-CCCCeEEEEEcH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHHH
Confidence            8 899999998753        467777665 33467889999999987775

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.94  E-value=3.4e-25  Score=205.15  Aligned_cols=211  Identities=16%  Similarity=0.153  Sum_probs=172.6

Q ss_pred             CCCCCee--ecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547           42 NDPRPVI--PLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYITLG  118 (311)
Q Consensus        42 ~~~~~~i--~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g  118 (311)
                      .++.+++  +|+.|.|.    ++.|+.+.+++.+.+..+   .|.+ ..+..++|++++++++        .+++++|+|
T Consensus        11 ~gg~~~~~~~l~~~~p~----~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~g   75 (424)
T 2po3_A           11 FGGPAAFDQPLLVGRPN----RIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG--------VRHAVATCN   75 (424)
T ss_dssp             GTCCCSCSSCEETTCCC----CCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT--------SSEEEEESC
T ss_pred             hcCCccccccccccCCC----CCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC--------CCeEEEeCC
Confidence            3566665  68888865    667899999999888653   4776 6789999999999994        258999999


Q ss_pred             hHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCc
Q 021547          119 CMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCG  198 (311)
Q Consensus       119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG  198 (311)
                      +++++.+++.++. +| |+|+++.|+|..+...++..|.+++.+++++ +++.+|+++|++.++++++++++++   |||
T Consensus        76 gt~al~~~l~~l~-~g-d~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~tG  149 (424)
T 2po3_A           76 ATAGLQLLAHAAG-LT-GEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGVH---LWG  149 (424)
T ss_dssp             HHHHHHHHHHHHT-CC-SEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEEC---GGG
T ss_pred             HHHHHHHHHHHcC-CC-CEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEEC---CCC
Confidence            9999999999985 78 9999999999999999999999999998754 4678999999999988888888754   899


Q ss_pred             cCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547          199 NVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL  277 (311)
Q Consensus       199 ~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~  277 (311)
                      ...+   +++|.++|+++|++||+|++|+ ++.+++.+   +..+.   + +++.||||.++++|.|+||++++++    
T Consensus       150 ~~~~---l~~i~~la~~~~~~li~Dea~~~g~~~~~~~---~~~~~---d-i~~~S~sk~K~l~~~~~G~~v~~~~----  215 (424)
T 2po3_A          150 RPCA---ADQLRKVADEHGLRLYFDAAHALGCAVDGRP---AGSLG---D-AEVFSFHATKAVNAFEGGAVVTDDA----  215 (424)
T ss_dssp             CCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS---S-EEEEECCTTSSSCCSSCEEEEESCH----
T ss_pred             CcCC---HHHHHHHHHHcCCEEEEECccccCCeECCee---ccccc---C-EEEEeCCCCCCccCCCCeEEEeCCH----
Confidence            9876   9999999999999999999999 56665532   22222   2 8999999666778899999998643    


Q ss_pred             chhhHHHHHhhhh
Q 021547          278 QKSGIVGSIKACL  290 (311)
Q Consensus       278 ~~~~~~~~~~~~~  290 (311)
                         +++++++...
T Consensus       216 ---~l~~~l~~~~  225 (424)
T 2po3_A          216 ---DLAARIRALH  225 (424)
T ss_dssp             ---HHHHHHHHHH
T ss_pred             ---HHHHHHHHHH
Confidence               3667666543

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=99.94  E-value=5.7e-26  Score=206.55  Aligned_cols=237  Identities=16%  Similarity=0.107  Sum_probs=174.4

Q ss_pred             CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSS--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      ++..++||+.|.|..  .++ +++.+.+++.+.+...  ....|. ..+..++++++++++    |  + ++++++|+|+
T Consensus        26 ~g~~~ld~~~~~~~~--~~g~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~l~~~la~~~----g--~-~~~v~~~~g~   95 (375)
T 2eh6_A           26 EGKEYLDFVSGIGVN--SLGHAYPKLTEALKEQVEKLLHVSNLYE-NPWQEELAHKLVKHF----W--T-EGKVFFANSG   95 (375)
T ss_dssp             TCCEEEESSHHHHTC--TTCBSCHHHHHHHHHHHHHCSCCCTTBC-CHHHHHHHHHHHHTS----S--S-CEEEEEESSH
T ss_pred             CCCEEEEcCCccccc--ccCCCCHHHHHHHHHHHHhccccCcccC-CHHHHHHHHHHHhhc----C--C-CCeEEEeCch
Confidence            467899999886531  244 7899999999988642  123563 456788888888886    3  2 3789999999


Q ss_pred             HHHHHHHHHH---Hh---cCCCCEEEecCCCCcchHHHHHHcCcE-------------EEEeeccCCCCcccCHHHHHhh
Q 021547          120 MEAVEIILTV---IT---RLGAANILLPRPGWPFYESFAKRNHIE-------------VRHFDLLPERGWEVDLEAVEAL  180 (311)
Q Consensus       120 ~~a~~~~~~~---l~---~~g~d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~  180 (311)
                      ++++.+++.+   +.   ++|.|+|+++.|+|+.+...+...+..             +..++.       .|+++|++.
T Consensus        96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  168 (375)
T 2eh6_A           96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKL  168 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHHHH
Confidence            9999998875   34   555589999999998876655443322             222221       489999999


Q ss_pred             cCCCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCC
Q 021547          181 ADENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI  259 (311)
Q Consensus       181 l~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~  259 (311)
                      ++++++++++++++||||.+ .+.+++++|.++|+++|+++|+|++|.++.+.+.. ..+..+....+++   |+||.++
T Consensus       169 l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~d~~---s~SK~~~  244 (375)
T 2eh6_A          169 LDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEF-YAYQHFNLKPDVI---ALAKGLG  244 (375)
T ss_dssp             CCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE---EECGGGG
T ss_pred             hcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-hhhhhcCCCCCEE---EEccccc
Confidence            98889999999999999998 56888999999999999999999999976544422 2333333223334   7889987


Q ss_pred             CCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          260 VPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       260 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                       +|+|+||+++++        ++++.++.. ...++++++++|+++.+.|+
T Consensus       245 -~g~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (375)
T 2eh6_A          245 -GGVPIGAILARE--------EVAQSFTPGSHGSTFGGNPLACRAGTVVVD  286 (375)
T ss_dssp             -TTSCCEEEEEEH--------HHHTTCCTTSCCCSSTTCHHHHHHHHHHHH
T ss_pred             -CCCCeEEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence             699999999864        356665543 23345678899988877665

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.94  E-value=3.9e-25  Score=205.08  Aligned_cols=233  Identities=13%  Similarity=0.106  Sum_probs=172.7

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc-C-CCCCCCCCCC----cHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS-S-MFNCYAPMFG----LPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~-~-~~~~Y~~~~g----~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      ++++|+|+.|++   +++..++.+.+++.+.+.. + ....|....|    ..++++.++++++      .  +++++++
T Consensus        63 g~~~id~~~~~~---lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g------~--~~~i~~~  131 (427)
T 2w8t_A           63 GKDTILLGTYNY---MGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYG------T--TGAIVFS  131 (427)
T ss_dssp             TEEEEECSCCCT---TCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHT------C--SEEEEES
T ss_pred             CceEEEEECccc---ccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhC------C--CceEEec
Confidence            567899999974   2456789999999998864 2 1222333334    4778888888873      1  3566666


Q ss_pred             ChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC----CccEEEEeCC
Q 021547          118 GCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE----NTAAIVIINP  193 (311)
Q Consensus       118 g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~i~i~~p  193 (311)
                      +|++++..++.++.++| |.|+++.|+|..+...++..|.+++.++.       .|++.|++.+++    ++++|+++++
T Consensus       132 sGs~a~~~al~~l~~~g-d~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~  203 (427)
T 2w8t_A          132 TGYMANLGIISTLAGKG-EYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGV  203 (427)
T ss_dssp             CHHHHHHHHHHHHSCTT-CEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESE
T ss_pred             CcHHHHHHHHHHhcCCC-CEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCC
Confidence            77789999999999999 99999999999999999999999988863       488999988765    7889999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      +||+|.+++   +++|.++|++||+++|+||+|+.+.++.........++ ..+.++++.|+||.++++|   ||++++.
T Consensus       204 ~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~  277 (427)
T 2w8t_A          204 YSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNH  277 (427)
T ss_dssp             ETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECC
T ss_pred             CCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCH
Confidence            999999999   99999999999999999999998776421111111122 1234799999999998777   9999853


Q ss_pred             CCCccchhhHHHHHhhh---hccccCCCchhHHHHHhhhh
Q 021547          273 PNGVLQKSGIVGSIKAC---LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       273 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~  309 (311)
                       +       +++.+...   ...+.+.+++.++++.+.|+
T Consensus       278 -~-------l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~  309 (427)
T 2w8t_A          278 -P-------KFEAVRLACRPYIFTASLPPSVVATATTSIR  309 (427)
T ss_dssp             -T-------TGGGGGGTCHHHHSSCCCCHHHHHHHHHHHH
T ss_pred             -H-------HHHHHHHhcccccccCCCCHHHHHHHHHHHH
Confidence             2       44444433   11234566776666555553

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.93  E-value=3.6e-25  Score=204.46  Aligned_cols=206  Identities=17%  Similarity=0.136  Sum_probs=159.4

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC----------CCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP----------MFGLPLARRAVAEYLNRDLPYKLSAD  111 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~----------~~g~~~lr~~ia~~l~~~~g~~~~~~  111 (311)
                      ..++++|.|+.+.+     .++++.+.+++.+.+.......++.          .....++++.+++++      +.+++
T Consensus        18 ~~~~~~iyld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~   86 (423)
T 3lvm_A           18 RAMKLPIYLDYSAT-----TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLV------GADPR   86 (423)
T ss_dssp             --CCSSEECBTTTC-----CCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCCGG
T ss_pred             cccCCCEeecCCCc-----CCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHc------CCCCC
Confidence            35788999998874     3678999999988775111101111          123366777777777      34677


Q ss_pred             CEEEeCChHHHHHHHHHHHhc----CCCCEEEecCCCCcchHHHH---HHcCcEEEEeeccCCCCcccCHHHHHhhcCCC
Q 021547          112 DIYITLGCMEAVEIILTVITR----LGAANILLPRPGWPFYESFA---KRNHIEVRHFDLLPERGWEVDLEAVEALADEN  184 (311)
Q Consensus       112 ~v~~t~g~~~a~~~~~~~l~~----~g~d~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~  184 (311)
                      +|++|+|+++|+.+++.++.+    +| |+|+++.++|+++...+   +..|.+++.++...  ++.+|++.|++.++++
T Consensus        87 ~v~~~~ggt~a~~~a~~~l~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~  163 (423)
T 3lvm_A           87 EIVFTSGATESDNLAIKGAANFYQKKG-KHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRDD  163 (423)
T ss_dssp             GEEEESSHHHHHHHHHHHHHHHHTTTC-CEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCTT
T ss_pred             eEEEeCChHHHHHHHHHHHHHhhccCC-CEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCCC
Confidence            999999999999999998874    79 99999999999987766   55599999998753  5678999999999999


Q ss_pred             ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce
Q 021547          185 TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR  264 (311)
Q Consensus       185 ~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r  264 (311)
                      ++++++++|+||||.+++   +++|.++|+++|++||+|++|+...    ....+.   ..+..+++.|+||.++.+|  
T Consensus       164 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~----~~~~~~---~~~~di~~~s~sK~~g~~g--  231 (423)
T 3lvm_A          164 TILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGK----LPIDLS---QLKVDLMSFSGHKIYGPKG--  231 (423)
T ss_dssp             EEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT----SCCCTT---TSCCSEEEEESTTTTSCSS--
T ss_pred             cEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCC----CCcChh---hcCCCEEEechHHhcCCCC--
Confidence            999999999999999999   8889999999999999999987522    111222   2234599999999887666  


Q ss_pred             eeEEEeeCC
Q 021547          265 FGWLATNDP  273 (311)
Q Consensus       265 ~G~i~~~~~  273 (311)
                      +||+++++.
T Consensus       232 ~G~~~~~~~  240 (423)
T 3lvm_A          232 IGALYVRRK  240 (423)
T ss_dssp             CEEEEECBT
T ss_pred             eEEEEEecc
Confidence            899998643

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=99.93  E-value=1e-25  Score=206.72  Aligned_cols=238  Identities=13%  Similarity=0.129  Sum_probs=170.4

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      ++..++||+.+....+.++ .+|.+.+++.+.+.....  +.. ....+.++.+++.+.+.+|    .+++++|+|++++
T Consensus        38 ~g~~~ld~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~gg~~a  109 (397)
T 2ord_A           38 KGNAYLDFTSGIAVNVLGH-SHPRLVEAIKDQAEKLIH--CSN-LFWNRPQMELAELLSKNTF----GGKVFFANTGTEA  109 (397)
T ss_dssp             TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHHHCSC--CCT-TSEEHHHHHHHHHHHHTTT----SCEEEEESSHHHH
T ss_pred             CCCEEEECCccccccccCC-CCHHHHHHHHHHHHhccc--Ccc-ccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence            4678899987721111122 578999999998864321  111 1122445555555555443    5789999999999


Q ss_pred             HHHHHHHHhc------CCCCEEEecCCCCcch-HHHHHHcCcE------------EEEeeccCCCCcccCHHHHHhhcCC
Q 021547          123 VEIILTVITR------LGAANILLPRPGWPFY-ESFAKRNHIE------------VRHFDLLPERGWEVDLEAVEALADE  183 (311)
Q Consensus       123 ~~~~~~~l~~------~g~d~Vl~~~p~~~~~-~~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~~  183 (311)
                      +.+++.++..      +|.+.|++..|+|.+. ...++..|.+            +..++.       .|+++|++.+++
T Consensus       110 ~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~  182 (397)
T 2ord_A          110 NEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSE  182 (397)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCT
T ss_pred             HHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhc
Confidence            9999998864      5437899999998654 4466777765            555543       289999999988


Q ss_pred             CccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547          184 NTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG  262 (311)
Q Consensus       184 ~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G  262 (311)
                      +++++++++|+||||. +++.+++++|.++|++||+++|+||+|.++.+.+.. ..+..++...+++   |+||.++ +|
T Consensus       183 ~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~d~~---s~sK~~~-~G  257 (397)
T 2ord_A          183 DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKYGVVPDVL---TTAKGLG-GG  257 (397)
T ss_dssp             TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCCSEE---EECGGGG-TT
T ss_pred             CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhhCCCCCee---eeccccC-CC
Confidence            9999999999999999 999999999999999999999999999987665542 2233333222333   7899988 89


Q ss_pred             ceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          263 WRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       263 ~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +|+||+++++.        ++ .++.. ...++++++++|+++.+.|+
T Consensus       258 ~r~G~~~~~~~--------~~-~l~~~~~~~~~~~~~~~~~a~~~~l~  296 (397)
T 2ord_A          258 VPIGAVIVNER--------AN-VLEPGDHGTTFGGNPLACRAGVTVIK  296 (397)
T ss_dssp             SCCEEEEECST--------TC-CCCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred             cCeEEEEEchH--------hc-ccCCCCcCCCCCCCHHHHHHHHHHHH
Confidence            99999998653        33 33322 23356789999998888765

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=99.93  E-value=8.2e-26  Score=209.06  Aligned_cols=245  Identities=14%  Similarity=0.071  Sum_probs=174.9

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF--NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      .+..++||+.+.+....++ +++.+.+++.+.+.....  ..|.+..+..++|+++++++.   | . .+++|++|+|++
T Consensus        39 ~g~~~id~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~  112 (426)
T 1sff_A           39 EGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGS  112 (426)
T ss_dssp             TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHH
T ss_pred             CCCEEEEcccChhhcccCC-CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchH
Confidence            4677889987753222122 678999999998864322  146666788999999999983   2 1 347999999999


Q ss_pred             HHHHHHHH---HHhcCCCCEEEecCCCCcchH-HHHHHcCcE-------------EEEeeccC---CCCcccCHHHHHhh
Q 021547          121 EAVEIILT---VITRLGAANILLPRPGWPFYE-SFAKRNHIE-------------VRHFDLLP---ERGWEVDLEAVEAL  180 (311)
Q Consensus       121 ~a~~~~~~---~l~~~g~d~Vl~~~p~~~~~~-~~~~~~g~~-------------~~~~~~~~---~~~~~~d~~~l~~~  180 (311)
                      +++.+++.   .+.++|  +|++.+|+|+++. ..+...|.+             ++.+++..   ..++.+|++.|++.
T Consensus       113 ~a~~~~~~~a~~~~~~~--~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~  190 (426)
T 1sff_A          113 EAVENAVKIARAATKRS--GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRI  190 (426)
T ss_dssp             HHHHHHHHHHHHHHTCC--EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCC--eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHH
Confidence            99999988   666655  7999999998754 455555543             55666532   12345789999988


Q ss_pred             cC-----CCccEEEEe-CCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEec
Q 021547          181 AD-----ENTAAIVII-NPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGS  253 (311)
Q Consensus       181 l~-----~~~~~i~i~-~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s  253 (311)
                      ++     ++++++++. +++| || ..++.+++++|.++|++||++||+||+|.++.+.+.. ..+.....   .+.+.|
T Consensus       191 l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~---~~di~s  265 (426)
T 1sff_A          191 FKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTL-FAMEQMGV---APDLTT  265 (426)
T ss_dssp             HHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTS---CCSEEE
T ss_pred             HHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccch-hhhhhcCC---CCCEEE
Confidence            75     345565553 3467 99 7889999999999999999999999999987665532 22222221   233449


Q ss_pred             CcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          254 ISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       254 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |||.|+. |+|+||++++.        ++++.+... ...+.++++++|+++.+.|+
T Consensus       266 ~sK~~~~-GlriG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~aal~  313 (426)
T 1sff_A          266 FAKSIAG-GFPLAGVTGRA--------EVMDAVAPGGLGGTYAGNPIACVAALEVLK  313 (426)
T ss_dssp             ECGGGGT-SSCCEEEEEEH--------HHHTTSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred             EcccccC-CCceEEEEEcH--------HHHhhhccCCcCcCCCCCHHHHHHHHHHHH
Confidence            9999987 99999999864        356655543 23456789999999886554

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=99.93  E-value=3.9e-25  Score=201.74  Aligned_cols=201  Identities=14%  Similarity=0.085  Sum_probs=158.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC-------
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL-------  133 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~-------  133 (311)
                      .++++.+.+++.+.+..... .|....+..++++.+.+++.+.+|.  ++++|++|+|+++++..++.++..+       
T Consensus        40 ~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~--~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~  116 (397)
T 3f9t_A           40 SNVLPITRKIVDIFLETNLG-DPGLFKGTKLLEEKAVALLGSLLNN--KDAYGHIVSGGTEANLMALRCIKNIWREKRRK  116 (397)
T ss_dssp             CCCCTHHHHHHHHHTTCCTT-SGGGBHHHHHHHHHHHHHHHHHTTC--TTCEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhCC--CCCCEEEecCcHHHHHHHHHHHHHHHHhhhhh
Confidence            34567889999988764321 2222224567777777777766653  5779999999999999999999876       


Q ss_pred             ------CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHH
Q 021547          134 ------GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHL  206 (311)
Q Consensus       134 ------g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l  206 (311)
                            | |+|+++.|+|..+...++..|.+++.++.+  .++.+|+++|++.+++ +++++++++|+||||.+.+   +
T Consensus       117 ~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l  190 (397)
T 3f9t_A          117 GLSKNEH-PKIIVPITAHFSFEKGREMMDLEYIYAPIK--EDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---I  190 (397)
T ss_dssp             TCCCCSS-CEEEEETTCCTHHHHHHHHHTCEEEEECBC--TTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---H
T ss_pred             cccCCCC-eEEEECCcchhHHHHHHHHcCceeEEEeeC--CCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---H
Confidence                  8 999999999999999999999999999875  3577999999999988 8999999999999999988   8


Q ss_pred             HHHHHHHHHhCCEEEEeccccCCccC--CCC--C----CcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          207 QKIAETARKLGILVIADEVYGHLAFG--STP--Y----IPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       207 ~~l~~l~~~~~~~li~D~ay~~~~~~--~~~--~----~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      ++|.++|++||+++|+|++|+.+.+.  +..  .    .++ .+.. +..+++.|++|. +++|.|+|+++++++
T Consensus       191 ~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~s~~K~-~~~~~~~g~~~~~~~  262 (397)
T 3f9t_A          191 EELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKF-DFSL-GVDSITIDPHKM-GHCPIPSGGILFKDI  262 (397)
T ss_dssp             HHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCC-SGGG-TCSEEECCTTTT-TCCCSSCEEEEESSG
T ss_pred             HHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccc-cccc-cCCeEEEccccc-cCCCCCceEEEEeCH
Confidence            99999999999999999999875432  210  0    011 1111 345889999997 567889999998764

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.93  E-value=4.1e-25  Score=202.80  Aligned_cols=233  Identities=14%  Similarity=0.101  Sum_probs=175.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc-CCC---CCCC--CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS-SMF---NCYA--PMFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~-~~~---~~Y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      +++.+|+|+.|+|.   .+..++.+.+++.+.+.. +..   ..|.  ...+..++|+++++++.      .+ +.++++
T Consensus        43 ~g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~-~~i~~~  112 (401)
T 1fc4_A           43 DGSHVINFCANNYL---GLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLG------ME-DAILYS  112 (401)
T ss_dssp             TSCEEEECCCSCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHT------CS-EEEEES
T ss_pred             CCccEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhC------CC-cEEEeC
Confidence            46789999999641   223589999999988764 211   1221  14567899999999993      23 455554


Q ss_pred             CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEE
Q 021547          117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVI  190 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i  190 (311)
                       +|++++..++.+++++| |.|+++.|+|..+...++..|.+++.++.       .|++++++.+++      +++++++
T Consensus       113 -sGs~a~~~~~~~~~~~g-d~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~  183 (401)
T 1fc4_A          113 -SCFDANGGLFETLLGAE-DAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIAT  183 (401)
T ss_dssp             -CHHHHHHTTHHHHCCTT-CEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEE
T ss_pred             -ChHHHHHHHHHHHcCCC-CEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEE
Confidence             55779999999999999 99999999999888889999999988863       478888887764      6889999


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCcc-CCCCCCcccccCCCCCeEEEecCcccC-CCCcceeeE
Q 021547          191 INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAF-GSTPYIPMGVFGSIVPVITLGSISKRW-IVPGWRFGW  267 (311)
Q Consensus       191 ~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~-~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~  267 (311)
                      ++|+||||.+++   +++|.++|+++|+++|+|++|+ ++.+ ++........+.. +.++++.|+||.| +.+|   ||
T Consensus       184 ~~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g---G~  256 (401)
T 1fc4_A          184 DGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG---GY  256 (401)
T ss_dssp             ESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---EE
T ss_pred             eCCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---EE
Confidence            999999999999   9999999999999999999996 6653 3433222122222 3469999999998 6565   99


Q ss_pred             EEeeCCCCccchhhHHHHHhhhh---ccccCCCchhHHHHHhhhh
Q 021547          268 LATNDPNGVLQKSGIVGSIKACL---GVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       268 i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++++.        ++++.+....   ..+.++++++|+++.+.|+
T Consensus       257 ~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~  293 (401)
T 1fc4_A          257 TAARK--------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLE  293 (401)
T ss_dssp             EEECH--------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHH
T ss_pred             EEcCH--------HHHHHHHHhCcCceeCCCCCHHHHHHHHHHHH
Confidence            99842        4677766542   1245778899988887664

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.93  E-value=1.2e-25  Score=210.47  Aligned_cols=228  Identities=18%  Similarity=0.142  Sum_probs=170.9

Q ss_pred             CCeeecCCC-CCCCCCCCCCcHHHHHHHHHH---HhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           45 RPVIPLGHG-DPAAFPCFRTAAVAEDAIVDS---VRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        45 ~~~i~~~~g-~p~~~~~~~~~~~~~~a~~~~---~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      .++|+|+.| +|    .++.++.+.+++...   ........|. ..|.+ +++++++++.+.+|.    +++++++|++
T Consensus        89 ~~~i~l~~g~~~----~~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~----~~~i~~~sGt  158 (464)
T 1ibj_A           89 TLLVNLDNKFDP----FDAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDKA----DRAFCFTSGM  158 (464)
T ss_dssp             HHHTCCCCSSCT----TCCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHTC----SEEEEESSHH
T ss_pred             CeEEECCCCCCC----CCCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhCC----CeEEEECCHH
Confidence            457888887 54    355555566665432   1112233576 34555 677888888776653    3778888889


Q ss_pred             HHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCC
Q 021547          121 EAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNP  196 (311)
Q Consensus       121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~np  196 (311)
                      +++.+++. ++++| |+|+++.|.|.++...    ++..|.+++.++..       |++++++.++++++++++++|+||
T Consensus       159 ~al~~~l~-~~~~G-d~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~~~tk~v~l~~p~Np  229 (464)
T 1ibj_A          159 AALSAVTH-LIKNG-EEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIGPQTKLVWLESPTNP  229 (464)
T ss_dssp             HHHHHHHT-TSCTT-CEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCCSSEEEEEECSSCTT
T ss_pred             HHHHHHHH-HhCCC-CEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhccCceEEEEeCCCCC
Confidence            99998876 77899 9999999999988753    56789999988752       889999999999999999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC-cceeeEEEeeCCCC
Q 021547          197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP-GWRFGWLATNDPNG  275 (311)
Q Consensus       197 tG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-G~r~G~i~~~~~~~  275 (311)
                      ||.+++   +++|.++|+++|+++|+|++|....    ...++.    .+++|++.|+||.|+.+ |+|+||++++++  
T Consensus       230 tG~v~~---l~~i~~la~~~gi~livDea~~~g~----~~~~~~----~~~div~~S~sK~~~g~~Gl~~G~l~~~~~--  296 (464)
T 1ibj_A          230 RQQISD---IRKISEMAHAQGALVLVDNSIMSPV----LSRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGE--  296 (464)
T ss_dssp             TCCCCC---HHHHHHHHHTTTCEEEEECTTTCTT----TCCGGG----TTCSEEEEETTTTTTCSSCCCCEEEEECSH--
T ss_pred             CCEeec---HHHHHHHHHHcCCEEEEECCCcccc----cCChhh----cCCEEEEECCcccccCCCCCcEEEEEEChH--
Confidence            999998   9999999999999999999997521    111222    23569999999998765 899999998642  


Q ss_pred             ccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          276 VLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       276 ~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                           ++++.++.... ...+.+++.|+++.+.++
T Consensus       297 -----~l~~~l~~~~~~~g~~~~~~~~~a~~~al~  326 (464)
T 1ibj_A          297 -----KLAKEVYFLQNSEGSGLAPFDCWLCLRGIK  326 (464)
T ss_dssp             -----HHHHHHHHHHHHTTCBCCHHHHHHHHHHHT
T ss_pred             -----HHHHHHHHHHHhcCCCCCHHHHHHHHhchh
Confidence                 36677766543 345678888888766654

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.93  E-value=1.8e-24  Score=199.23  Aligned_cols=204  Identities=13%  Similarity=0.140  Sum_probs=158.6

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCC----CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--FNC----YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--~~~----Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      +++.++||+.+++   ..++.+|.+.+++.+.+....  ...    |.......++++++++++..        +..+++
T Consensus        57 ~g~~~ld~~s~~~---l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~~  125 (409)
T 3kki_A           57 ASPDDIILQSNDY---LALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGF--------DECLLS  125 (409)
T ss_dssp             CCTTSEECCCSCT---TCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTC--------SEEEEE
T ss_pred             CCCceEEeeccCc---cCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCC--------CeEEEe
Confidence            4678999988764   356778999999999987521  111    22334567888888888832        235556


Q ss_pred             CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCC
Q 021547          117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCN  195 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~n  195 (311)
                      +++++++..++.+++++| |.|+++.|+|..+...++..|.+++.++.       .|+++|++.+++ +++++++++|+|
T Consensus       126 ~sGt~a~~~~l~~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~n  197 (409)
T 3kki_A          126 QSGWNANVGLLQTICQPN-TNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYS  197 (409)
T ss_dssp             SCHHHHHHHHHHHHCCTT-CEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCT
T ss_pred             cchHHHHHHHHHHhcCCC-CEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCC
Confidence            666899999999999999 99999999999999999999999988764       489999998875 589999999999


Q ss_pred             CCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccC--CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       196 ptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      |||.+++   +++|.++|++||++||+||+|....++  +......... .....|++.|+||.|+++|   ||++++.
T Consensus       198 ptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~-~~~~di~~~s~sK~~~~~g---g~v~~~~  269 (409)
T 3kki_A          198 TLGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGL-TREVHFMTASLAKTFAYRA---GAIWCNN  269 (409)
T ss_dssp             TTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTC-GGGCSEEEEESSSTTCSSC---EEEEESS
T ss_pred             CCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCC-CCCCCEEEeecchhhCCCc---eEEEECH
Confidence            9999999   999999999999999999999875443  3222211111 1224589999999998775   9988754

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.93  E-value=8.1e-25  Score=200.88  Aligned_cols=233  Identities=15%  Similarity=0.095  Sum_probs=168.7

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc-CC-----CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS-SM-----FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~-~~-----~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      ++++++|..++..   .++.+|.+.+++.+.+.. ..     ...|....+..++|+++++++.       .+++|++|+
T Consensus        45 g~~~i~~~~~~~~---~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-------~~~~i~~~s  114 (401)
T 2bwn_A           45 KQDITVWCGNDYL---GMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ-------KEAALVFSS  114 (401)
T ss_dssp             EEEEEECSCSCTT---SGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT-------CSEEEEESC
T ss_pred             CCcEEEeeCCCcc---cCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC-------CCcEEEECC
Confidence            3456888876531   344577899999998864 11     1235555678999999999984       246788877


Q ss_pred             ChHHHHHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC----CCccEEEEe
Q 021547          118 GCMEAVEIILTVIT--RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD----ENTAAIVII  191 (311)
Q Consensus       118 g~~~a~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~  191 (311)
                      |++ ++..++..+.  .+| |.|+++.|+|..+...++..|.+++.++..       |++++++.++    +++++++++
T Consensus       115 G~~-a~~~~~~~l~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~  185 (401)
T 2bwn_A          115 AYN-ANDATLSTLRVLFPG-LIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFE  185 (401)
T ss_dssp             HHH-HHHHHHHHHHHHSTT-CEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEE
T ss_pred             cHH-HHHHHHHHHhcCCCC-CEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEe
Confidence            766 7777777664  489 999999999999999999999999988752       6788887765    578999999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEe
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      +|+||||.+++   +++|.++|++||+++|+|++|+...++......+..... ...+++++|+||.|+++|   ||+++
T Consensus       186 ~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~  259 (401)
T 2bwn_A          186 SVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAA  259 (401)
T ss_dssp             SBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEE
T ss_pred             cCcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEec
Confidence            99999999999   899999999999999999999954443211111111111 123699999999999888   99987


Q ss_pred             eCCCCccchhhHHHHHhhhh---ccccCCCchhHHHHHhhhh
Q 021547          271 NDPNGVLQKSGIVGSIKACL---GVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~  309 (311)
                      +.        ++++.++...   ....+.++++|+++.+.++
T Consensus       260 ~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~  293 (401)
T 2bwn_A          260 SA--------RMVDAVRSYAPGFIFSTSLPPAIAAGAQASIA  293 (401)
T ss_dssp             CH--------HHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHH
T ss_pred             CH--------HHHHHHHHhCcCceecCCCCHHHHHHHHHHHH
Confidence            42        3666655431   2223345577766655543

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.93  E-value=1.6e-24  Score=197.67  Aligned_cols=220  Identities=14%  Similarity=0.024  Sum_probs=165.6

Q ss_pred             CC-CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           44 PR-PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        44 ~~-~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +. +++|++.+.+    ..++++.+.+++.         .|..   ...+++.+++++.+.+|.. .++++++++|++++
T Consensus        26 g~~~v~~~~~~~~----~~~~~~~v~~a~~---------~~~~---~~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a   88 (374)
T 2aeu_A           26 GRDALYDLSGLSG----GFLIDEKDKALLN---------TYIG---SSYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSA   88 (374)
T ss_dssp             CGGGCEECSSCCC----CCCCCHHHHHHHT---------STTH---HHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHH
T ss_pred             CccceeeecccCC----CCCCCHHHHHHHH---------HhcC---chHHHHHHHHHHHHHhCCC-CcceEEEEcChHHH
Confidence            55 7899998874    3678899998885         1211   1345566666665555533 34789999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE-EEEeCCCCCCc
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA-IVIINPCNPCG  198 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-i~i~~p~nptG  198 (311)
                      +..++.++  +| |+|+++.|+|+++..   .++..|.+++.+         .|++++++. ++++++ +++++|+||||
T Consensus        89 ~~~~~~~~--~g-d~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~nptG  155 (374)
T 2aeu_A           89 ILATILAL--KP-KKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTMDLKV  155 (374)
T ss_dssp             HHHHHHHH--CC-SEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCTTSCB
T ss_pred             HHHHHHhC--CC-CEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCCCCCC
Confidence            99999988  89 999999998876433   678889988877         278999988 778999 99999999999


Q ss_pred             cCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc-CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547          199 NVLTYQHLQKIAETARKLGILVIADEVYGHLAF-GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL  277 (311)
Q Consensus       199 ~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~-~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~  277 (311)
                      .  +.+++++|.++|++||+++|+|++|+.+.. ......++ .+   +..++++|+||.  ++|+|+||++++.     
T Consensus       156 ~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~-~~---~~di~~~S~sK~--l~g~~~G~~~~~~-----  222 (374)
T 2aeu_A          156 I--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPAL-KL---GADLVVTSTDKL--MEGPRGGLLAGKK-----  222 (374)
T ss_dssp             C--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHH-HH---TCSEEEEETTSS--SSSCSCEEEEEEH-----
T ss_pred             C--CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcc-cc---CCcEEEecCccc--ccCcceEEEEECH-----
Confidence            7  778899999999999999999999987531 01011011 11   234899999998  4578999998853     


Q ss_pred             chhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          278 QKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       278 ~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                         +++++++.... ...+++++.|+++.+.|+
T Consensus       223 ---~~~~~l~~~~~~~~~~~~~~~~~a~~~al~  252 (374)
T 2aeu_A          223 ---ELVDKIYIEGTKFGLEAQPPLLAGIYRALK  252 (374)
T ss_dssp             ---HHHHHHHHHHHTTTCBCCHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHhhccccCCCCHHHHHHHHHHHH
Confidence               47777776543 344678888988887765

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.93  E-value=1.5e-24  Score=195.53  Aligned_cols=208  Identities=13%  Similarity=0.056  Sum_probs=163.6

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      .+.+|+|+.+.+     .++++.+.+++.+.+.     .|....|..++++.+++++.+.+|  .++++|++|+|+++++
T Consensus        12 ~p~~i~l~~~~~-----~~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~   79 (359)
T 1svv_A           12 KPKPYSFVNDYS-----VGMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTN   79 (359)
T ss_dssp             ---CEECSCSCS-----SCCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHH
T ss_pred             CCeeEEecCCCc-----CCCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHH
Confidence            467899999763     2578999999998875     466666778889999999888776  4677899999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHH--HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC-------ccEEEEeCCC
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYES--FAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN-------TAAIVIINPC  194 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-------~~~i~i~~p~  194 (311)
                      ..++.+++++| |+|+++.|+|..+..  .++..|.+++.++..   ++.+|+++|++.++++       ++++++++| 
T Consensus        80 ~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-  154 (359)
T 1svv_A           80 LIACSLALRPW-EAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-  154 (359)
T ss_dssp             HHHHHHHCCTT-EEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-
T ss_pred             HHHHHHHhCCC-CEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-
Confidence            99999999999 999999999998877  588899999999863   6789999999988765       889999998 


Q ss_pred             CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      ||||.+++.+++++|.++|++||+++|+|++|..+.++..+. ....+. .....+++.|.+|. +.+ .++|+++++
T Consensus       155 ~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~  229 (359)
T 1svv_A          155 TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN-DLTLADIARLTDMFYIGATKA-GGM-FGEALIILN  229 (359)
T ss_dssp             CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECS
T ss_pred             CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhhhhhcCCEEEEecccC-CCC-CceEEEEEc
Confidence            799999999999999999999999999999995432221111 111100 00122788899997 443 567888874

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.93  E-value=1.1e-24  Score=199.41  Aligned_cols=238  Identities=18%  Similarity=0.114  Sum_probs=171.5

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      +++.++||+.+.+....+. .+|.+.+++.+.+..... ..+.+.....++++.+++++        ..+++++|+|+++
T Consensus        34 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~--------g~~~v~~~~~gt~  104 (392)
T 3ruy_A           34 EGNRYMDLLSAYSAVNQGH-RHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT--------NKEMVLPMNTGAE  104 (392)
T ss_dssp             TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH--------TCSEEEEESSHHH
T ss_pred             CCCEEEEcCCChhhhccCC-CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc--------CCCEEEEeCcHHH
Confidence            4678899987743211111 579999999998864321 11122345567777777776        2679999999999


Q ss_pred             HHHHHHHHHhcC---------CCCEEEecCCCCcchHHHHHHcCcE-------------EEEeeccCCCCcccCHHHHHh
Q 021547          122 AVEIILTVITRL---------GAANILLPRPGWPFYESFAKRNHIE-------------VRHFDLLPERGWEVDLEAVEA  179 (311)
Q Consensus       122 a~~~~~~~l~~~---------g~d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~  179 (311)
                      ++..++..+..+         |.|+|++..|+|.++...+...+..             +..++.       .|+++|++
T Consensus       105 a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~  177 (392)
T 3ruy_A          105 AVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKA  177 (392)
T ss_dssp             HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHH
T ss_pred             HHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHH
Confidence            999999987654         2289999999998765555444322             333332       28999999


Q ss_pred             hcCCCccEEEEeCCCCCCccCCCHHH-HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC
Q 021547          180 LADENTAAIVIINPCNPCGNVLTYQH-LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW  258 (311)
Q Consensus       180 ~l~~~~~~i~i~~p~nptG~~~~~~~-l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~  258 (311)
                      .++++++++++++|+||||.+++.++ +++|.++|++||+++|+||+|.++.+.|... .........+++   ++||.+
T Consensus       178 ~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---~~SK~l  253 (392)
T 3ruy_A          178 AITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-ACDWDNVTPDMY---ILGKAL  253 (392)
T ss_dssp             HCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGG
T ss_pred             HhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-hhhccCCCCCEE---EEchhh
Confidence            99989999999999999999996666 9999999999999999999998776665432 223223223343   778985


Q ss_pred             CCCc-ceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          259 IVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       259 ~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      + +| +|+||++++.        ++++.+... ...++++++++|+++.+.|+
T Consensus       254 ~-gG~~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  297 (392)
T 3ruy_A          254 G-GGVFPISCAAANR--------DILGVFEPGSHGSTFGGNPLACAVSIAALE  297 (392)
T ss_dssp             G-TTTSCCEEEEECH--------HHHTTCCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred             h-CChhhhEEEEECH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHHH
Confidence            4 36 9999999853        366666654 33457889999999888775

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.92  E-value=4.3e-25  Score=198.70  Aligned_cols=232  Identities=16%  Similarity=0.166  Sum_probs=162.7

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      +..+|+|+.+...     .+++.+++++.+....  ...|.+..+..++|++++++++        .+++++++|+++++
T Consensus         2 ~~~~i~~~~~~~~-----~p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~   66 (347)
T 1jg8_A            2 PHMMIDLRSDTVT-----KPTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETFG--------KEAALFVPSGTMGN   66 (347)
T ss_dssp             ---CEECSCGGGC-----CCCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHH
T ss_pred             CceEEEeccccCC-----CCCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHhC--------CceEEEecCcHHHH
Confidence            4567899999732     3567888888654321  1257777788999999999994        24678888889999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCC
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPC  194 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~  194 (311)
                      .+++.+++++| |+|+++.|+|....   ..++..|.+++.+ ..  .++.+|++++++.+++      +++++++++|+
T Consensus        67 ~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~  142 (347)
T 1jg8_A           67 QVSIMAHTQRG-DEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTH  142 (347)
T ss_dssp             HHHHHHHCCTT-CEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSB
T ss_pred             HHHHHHhcCCC-CEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEeccc
Confidence            99999999999 99999999997532   2577789998887 32  3456899999998875      68999999999


Q ss_pred             CCC-ccCCCHHHHHHHHHHHHHhCCEEEEeccccCC--ccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          195 NPC-GNVLTYQHLQKIAETARKLGILVIADEVYGHL--AFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       195 npt-G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~--~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      ||| |.+++.+++++|+++|+++|+++|+|++|...  .+.+.....+..  .. . .++.|+||.++++   +|++++.
T Consensus       143 npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~--~~-d-~~~~s~sK~l~~~---~G~~~~~  215 (347)
T 1jg8_A          143 NRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG--YA-D-SVMFCLSKGLCAP---VGSVVVG  215 (347)
T ss_dssp             TTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHH--TC-S-EEEEESSSTTCCS---SCEEEEE
T ss_pred             cccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcc--cc-c-EEEEecccccCCC---ceEEEEc
Confidence            999 99999999999999999999999999987531  122222222211  11 1 3445899998654   6865443


Q ss_pred             CCCCccchhhHHHHHhhhh---ccccCCCchhHHHHHhhh
Q 021547          272 DPNGVLQKSGIVGSIKACL---GVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l  308 (311)
                      ++       +++++++...   +.....+.+.++++...+
T Consensus       216 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  248 (347)
T 1jg8_A          216 DR-------DFIERARKARKMLGGGMRQAGVLAAAGIIAL  248 (347)
T ss_dssp             CH-------HHHHHHHHHHHHHTCCCSSTHHHHHHHHHHH
T ss_pred             CH-------HHHHHHHHHHHHcCCchhHHHHHHHHHHHHH
Confidence            32       3666655432   212223444455444443

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.92  E-value=2.1e-24  Score=199.99  Aligned_cols=202  Identities=16%  Similarity=0.161  Sum_probs=144.1

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---------CcHHHHHHHHHHHhhcCCCCCCCCCEE
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF---------GLPLARRAVAEYLNRDLPYKLSADDIY  114 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~---------g~~~lr~~ia~~l~~~~g~~~~~~~v~  114 (311)
                      ..+++.|+.+.+.     ++++.+.+++.+.+...  ..|+...         ...++|++++++++      +++++|+
T Consensus        16 ~~~~~~Ld~~~~~-----~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~   82 (432)
T 3a9z_A           16 PNRKVYMDYNATT-----PLEPEVIQAVTEAMKEA--WGNPSSSYVAGRKAKDIINTARASLAKMIG------GKPQDII   82 (432)
T ss_dssp             --CCEECBTTTCC-----CCCHHHHHHHHHHHHHC--CSCTTCSSHHHHHHHHHHHHHHHHHHHHHT------CCGGGEE
T ss_pred             CCCcEEeeCCccC-----CCCHHHHHHHHHHHHHh--cCCCccCcHHHHHHHHHHHHHHHHHHHHcC------CCcCeEE
Confidence            3567888888742     67899999999988642  1333211         13588899998883      4667999


Q ss_pred             EeCChHHHHHHHHHHHh--------cCCCCEEEecCCCCcch-----------------HHHHHHcCcEEEEeeccCCCC
Q 021547          115 ITLGCMEAVEIILTVIT--------RLGAANILLPRPGWPFY-----------------ESFAKRNHIEVRHFDLLPERG  169 (311)
Q Consensus       115 ~t~g~~~a~~~~~~~l~--------~~g~d~Vl~~~p~~~~~-----------------~~~~~~~g~~~~~~~~~~~~~  169 (311)
                      +|+|+++++.+++.+++        ++| |+|+++.|+|..+                 ...++..|.+++.+++.. .+
T Consensus        83 ~~~g~t~a~~~~~~~~~~~~~~~~~~~g-d~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~-~~  160 (432)
T 3a9z_A           83 FTSGGTESNNLVIHSTVRCFHEQQTLQG-RTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSK-VN  160 (432)
T ss_dssp             EESCHHHHHHHHHHHHHHHHHHHHHHC-------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCT-TT
T ss_pred             EeCChHHHHHHHHHHHHhhhhhccccCC-ccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCc-cc
Confidence            99999999999999986        589 9999999999865                 344556799999998753 24


Q ss_pred             cccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC----------CEEEEeccccCCccCCCCCCcc
Q 021547          170 WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG----------ILVIADEVYGHLAFGSTPYIPM  239 (311)
Q Consensus       170 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~----------~~li~D~ay~~~~~~~~~~~~~  239 (311)
                      +.+|++.|++.++++++++++++|+||||.+++   +++|.++|++++          +++|+|++|+...    ....+
T Consensus       161 ~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~----~~~~~  233 (432)
T 3a9z_A          161 GQVEVEDILAAVRPTTCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK----RRVDV  233 (432)
T ss_dssp             SSCCHHHHHHTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT----SCCCH
T ss_pred             CCcCHHHHHHhccCCceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCC----cccCh
Confidence            578999999999989999999999999999999   678899999999          9999999997632    22222


Q ss_pred             cccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          240 GVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       240 ~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      ....   ..+++.|+||.+   |.|+||+++++.
T Consensus       234 ~~~~---~d~~~~s~~K~~---g~~~G~~~~~~~  261 (432)
T 3a9z_A          234 EDLG---VDFLTIVGHKFY---GPRIGALYVRGV  261 (432)
T ss_dssp             HHHC---CSEEEEEGGGTT---CCSCEEEEETTB
T ss_pred             hhcC---CCEEEEehhHhc---CCcceEEEEccc
Confidence            2222   226789999986   457999998653

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.92  E-value=1.4e-24  Score=199.37  Aligned_cols=210  Identities=13%  Similarity=0.101  Sum_probs=161.5

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCC----CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF---NCYA----PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG  118 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~---~~Y~----~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g  118 (311)
                      +.+.|+.+.+.     ++++.+.+++.+.+.....   ..|.    ...+..++|++++++++      +++++|++|+|
T Consensus        26 ~~~~ld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~~~g   94 (406)
T 3cai_A           26 GWVHFDAPAGM-----LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVN------ADPGGVVLGAD   94 (406)
T ss_dssp             SCEECBGGGCC-----CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHT------CCGGGEEEESC
T ss_pred             CeEEEeCCCcC-----CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCC
Confidence            47888887642     5688999999988864211   1232    13456788899999883      45679999999


Q ss_pred             hHHHHHHHHHHH---hcCCCCEEEecCCCCcchHHHHHH----cCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEe
Q 021547          119 CMEAVEIILTVI---TRLGAANILLPRPGWPFYESFAKR----NHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVII  191 (311)
Q Consensus       119 ~~~a~~~~~~~l---~~~g~d~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~  191 (311)
                      +++++.+++.++   +++| |+|+++.|+|..+...+..    .|.+++.+++.+ .++.+|+++|++.+++++++++++
T Consensus        95 ~t~al~~~~~~l~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~  172 (406)
T 3cai_A           95 RAVLLSLLAEASSSRAGLG-YEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDI-ETGELPTWQWESLISKSTRLVAVN  172 (406)
T ss_dssp             HHHHHHHHHHHTGGGGBTT-CEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCT-TTCCCCGGGHHHHCCTTEEEEEEE
T ss_pred             hHHHHHHHHHHHhhccCCC-CEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCc-ccCCcCHHHHHHHhCCCceEEEEe
Confidence            999999999988   6899 9999999999976544433    799999998753 346789999999999899999999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceee-EEEe
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG-WLAT  270 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G-~i~~  270 (311)
                      +|+||||.+++   +++|.++|+++|+++|+|++|+..    .....+..+   +..+++.|+||.++ ++  +| |+++
T Consensus       173 ~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g----~~~~~~~~~---~~d~~~~s~~K~~g-~~--~G~~~~~  239 (406)
T 3cai_A          173 SASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAP----YRLLDIRET---DADVVTVNAHAWGG-PP--IGAMVFR  239 (406)
T ss_dssp             SBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTT----TCCCCHHHH---CCSEEEEEGGGGTS-CS--CEEEEES
T ss_pred             CCcCCccccCC---HHHHHHHHHHcCCEEEEEcccccC----CCCCCchhc---CCCEEEeehhhhcC-CC--cCeEEEE
Confidence            99999999999   899999999999999999999842    111222222   24588999999864 44  89 9887


Q ss_pred             eCCCCccchhhHHHHHhhh
Q 021547          271 NDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~  289 (311)
                      ++        +++++++..
T Consensus       240 ~~--------~~~~~l~~~  250 (406)
T 3cai_A          240 DP--------SVMNSFGSV  250 (406)
T ss_dssp             CH--------HHHHTSCCC
T ss_pred             eh--------HHHhhcCCc
Confidence            53        355555543

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.92  E-value=5.4e-24  Score=194.56  Aligned_cols=185  Identities=17%  Similarity=0.209  Sum_probs=152.8

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecCC
Q 021547           65 AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPRP  143 (311)
Q Consensus        65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~p  143 (311)
                      +.+.+++.+.+..+.+ .|.+..+..++|++++++++.      . +.|++++| ++++.+++.++ +++| |+|+++.|
T Consensus        17 ~~~~~a~~~~l~~~~~-~~~~~~~~~~l~~~la~~~~~------~-~~i~~~sG-t~al~~~l~~l~~~~g-d~Vi~~~~   86 (388)
T 1b9h_A           17 DAERNGLVRALEQGQW-WRMGGDEVNSFEREFAAHHGA------A-HALAVTNG-THALELALQVMGVGPG-TEVIVPAF   86 (388)
T ss_dssp             HHHHHHHHHHHHTSCC-BTTTCSHHHHHHHHHHHHTTC------S-EEEEESCH-HHHHHHHHHHTTCCTT-CEEEEESS
T ss_pred             HHHHHHHHHHHHcCCe-eecCCHHHHHHHHHHHHHhCC------C-eEEEeCCH-HHHHHHHHHHcCCCCc-CEEEECCC
Confidence            8999999999876433 566677899999999999943      2 45666665 89999999999 8899 99999999


Q ss_pred             CCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547          144 GWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD  223 (311)
Q Consensus       144 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D  223 (311)
                      +|..+...++..|.+++.+++++ +++.+|++.|++.+++++++++   |+||||.+.+   +++|.++|+++|++||+|
T Consensus        87 ~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~la~~~~~~li~D  159 (388)
T 1b9h_A           87 TFISSSQAAQRLGAVTVPVDVDA-ATYNLDPEAVAAAVTPRTKVIM---PVHMAGLMAD---MDALAKISADTGVPLLQD  159 (388)
T ss_dssp             SCTHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHHTCCBCEE
T ss_pred             ccHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCccCcCC---HHHHHHHHHHcCCEEEEe
Confidence            99999999999999999998754 3578999999999988877766   8999999988   899999999999999999


Q ss_pred             ccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          224 EVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       224 ~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      ++|+. ..+.+..   +..+.    ++.+.||||.++++|.|+||+++++.
T Consensus       160 ~a~~~g~~~~~~~---~~~~~----~i~~~S~s~~K~l~g~~~G~~~~~~~  203 (388)
T 1b9h_A          160 AAHAHGARWQGKR---VGELD----SIATFSFQNGKLMTAGEGGAVVFPDG  203 (388)
T ss_dssp             CTTCTTCEETTEE---GGGSS----SCEEEECCTTSSSCSSSCEEEEECTT
T ss_pred             cchhcCCccCCee---ccccc----ceEEEEccCCCcccCCCeEEEEECCH
Confidence            99985 4443322   22222    48889999777777889999998654

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=99.92  E-value=2.3e-24  Score=199.38  Aligned_cols=249  Identities=15%  Similarity=0.104  Sum_probs=164.9

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .+..++||+.+.+....+.+.+|.+.+++.+.+....  .|....+..+.+..+++.+.+.+|... +++|++|+|++++
T Consensus        40 ~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea  116 (419)
T 2eo5_A           40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEA  116 (419)
T ss_dssp             TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHH
T ss_pred             CCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHH
Confidence            4677889988864322122227999999999986432  233222333455555566655555443 6799999999999


Q ss_pred             HHHHHHHHhc-CCCCEEEecCCCCcchHHHHH-HcC-------------cEEEEeeccCCC--Ccc------------cC
Q 021547          123 VEIILTVITR-LGAANILLPRPGWPFYESFAK-RNH-------------IEVRHFDLLPER--GWE------------VD  173 (311)
Q Consensus       123 ~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~-~~g-------------~~~~~~~~~~~~--~~~------------~d  173 (311)
                      +..+++++.. +| |+|++..|+|+++...+. ..|             .+++.++.....  .++            +|
T Consensus       117 ~~~ai~~~~~~~~-~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~  195 (419)
T 2eo5_A          117 IEASIKVVKNTGR-KYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRV  195 (419)
T ss_dssp             HHHHHHHHHTTSC-CEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHH
T ss_pred             HHHHHHHHHHhhC-CcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHH
Confidence            9999988754 47 999999999986543322 211             245666553210  112            46


Q ss_pred             HHHHH-hhcCC----CccEEEEeCCC-CCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547          174 LEAVE-ALADE----NTAAIVIINPC-NPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV  246 (311)
Q Consensus       174 ~~~l~-~~l~~----~~~~i~i~~p~-nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~  246 (311)
                      ++.|+ +.+++    +...+++++|+ ||||. .++.+++++|.++|++||+++|+||+|.++.+.|.. ..+.......
T Consensus       196 ~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~-~~~~~~~~~~  274 (419)
T 2eo5_A          196 IEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKL-FAIENFNTVP  274 (419)
T ss_dssp             HHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCC
T ss_pred             HHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcch-hhHHhcCCCC
Confidence            78898 87753    23445666775 67896 678888999999999999999999999987665532 2222222233


Q ss_pred             CeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          247 PVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       247 ~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +++   ||||.|+. | +|+||++++..        ++ .+......+++.++++|+++.+.|+
T Consensus       275 d~~---t~sK~~~~-G~~riG~~~~~~~--------~~-~~~~~~~~t~~~n~~~~~aa~aal~  325 (419)
T 2eo5_A          275 DVI---TLAKALGG-GIMPIGATIFRKD--------LD-FKPGMHSNTFGGNALACAIGSKVID  325 (419)
T ss_dssp             SEE---EECGGGGT-TTSCCEEEEEEGG--------GC-CC------CCCCCHHHHHHHHHHHH
T ss_pred             CEE---EecccccC-CccceEEEEEchH--------hh-cCCcccCCCCCCCHHHHHHHHHHHH
Confidence            433   89999985 9 99999998652        33 3321333466789999999888775

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.92  E-value=1.6e-24  Score=199.15  Aligned_cols=224  Identities=17%  Similarity=0.150  Sum_probs=174.8

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE  124 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~  124 (311)
                      .++|+|+.|.|.    +  ++.+.+++.+.+...   .|.+..+..++|+++++++..        +++++++|+++++.
T Consensus        30 ~~~id~~~~~~~----~--~~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~~~--------~~~v~~~~Gt~a~~   92 (399)
T 2oga_A           30 VPFLDLKAAYEE----L--RAETDAAIARVLDSG---RYLLGPELEGFEAEFAAYCET--------DHAVGVNSGMDALQ   92 (399)
T ss_dssp             BCSCCHHHHHHH----T--HHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHTTS--------SEEEEESCHHHHHH
T ss_pred             CcccccCcCCCC----C--CHHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHHCC--------CeEEEecCHHHHHH
Confidence            478899988743    2  388999999888653   576667889999999999842        26778888899999


Q ss_pred             HHHHHH-hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          125 IILTVI-TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       125 ~~~~~l-~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      .++.++ +++| |+|+++.|+|..+...++..|.+++.+++++ +++.+|++.+++.+++++++++   ++||||...+ 
T Consensus        93 ~~l~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~-  166 (399)
T 2oga_A           93 LALRGLGIGPG-DEVIVPSHTYIASWLAVSATGATPVPVEPHE-DHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD-  166 (399)
T ss_dssp             HHHHHTTCCTT-CEEEEESSSCTHHHHHHHHTTCEEEEECBCS-SSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC-
T ss_pred             HHHHHhCCCCc-CEEEECCCccHHHHHHHHHCCCEEEEEecCC-CCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC-
Confidence            999999 8899 9999999999999999999999999998753 3578999999999988877766   5789999988 


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCC-ccCCCCCCcccccCCCCCeEEEecC--cccCCCCcceeeEEEeeCCCCccchh
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHL-AFGSTPYIPMGVFGSIVPVITLGSI--SKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~-~~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                        +++|.++|+++|+++|+|++|+.+ .+++..   +..+    ..+++.|+  ||.++.+| |+||++++++       
T Consensus       167 --l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~---~~~~----~di~~~S~~~sK~~~~~G-~~g~~~~~~~-------  229 (399)
T 2oga_A          167 --MDALRELADRHGLHIVEDAAQAHGARYRGRR---IGAG----SSVAAFSFYPGKNLGCFG-DGGAVVTGDP-------  229 (399)
T ss_dssp             --HHHHHHHHHHHTCEECEECTTCTTCEETTEE---TTCT----TCEEEEECCTTSSSCCSS-CCEEEEESCH-------
T ss_pred             --HHHHHHHHHHcCCEEEEECcccccCccCCee---cccc----cCEEEEeCCCCccCCcCC-ceEEEEeCCH-------
Confidence              899999999999999999999864 333322   1111    13888898  79998889 9999998643       


Q ss_pred             hHHHHHhhhhcc-------------ccCCCchhHHHHHhhh
Q 021547          281 GIVGSIKACLGV-------------RSGPSTLIQVCEMFLL  308 (311)
Q Consensus       281 ~~~~~~~~~~~~-------------~~~~~~~~q~~~~~~l  308 (311)
                      +++++++.....             ....+++.++++.+.+
T Consensus       230 ~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l  270 (399)
T 2oga_A          230 ELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRL  270 (399)
T ss_dssp             HHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHH
Confidence            366666654321             1244666666655544

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=99.92  E-value=1.8e-24  Score=200.61  Aligned_cols=249  Identities=14%  Similarity=0.087  Sum_probs=165.4

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.++||+.+.+....+. .+|.+.+++.+.+...  ..|....+..+.++++++++.+.++  ...++|++|+|++++
T Consensus        27 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea  101 (430)
T 3i4j_A           27 AGRRYLDGSSGALVANIGH-GRAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEA  101 (430)
T ss_dssp             TSCEEEETTHHHHTCTTCB-CCHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHH
T ss_pred             CCCEEEECCCchhccccCC-CCHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHH
Confidence            5788999998732212122 3899999999988753  2344445666778888888877665  355799999999999


Q ss_pred             HHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcCcE---------------EEEeeccCC-CCcccCHHHHHh
Q 021547          123 VEIILTVITR-------LGAANILLPRPGWPFYESFAKRNHIE---------------VRHFDLLPE-RGWEVDLEAVEA  179 (311)
Q Consensus       123 ~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g~~---------------~~~~~~~~~-~~~~~d~~~l~~  179 (311)
                      +..++++++.       ++.+.|++..|+|+++...+...+..               +..++.... .....|++.|++
T Consensus       102 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~  181 (430)
T 3i4j_A          102 TESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRA  181 (430)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHH
Confidence            9999998874       22289999999999876554443332               112221100 001235588888


Q ss_pred             hcCC---CccEEEEeCC-CC-CCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc-CCCCCeEEEe
Q 021547          180 LADE---NTAAIVIINP-CN-PCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLG  252 (311)
Q Consensus       180 ~l~~---~~~~i~i~~p-~n-ptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~i~  252 (311)
                      .++.   +..++++++| +| ++|. .++.+++++|.++|++||+++|+||+|.++.+.|. ...+..+ ....+++   
T Consensus       182 ~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~-~~~~~~~~~~~~di~---  257 (430)
T 3i4j_A          182 LLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGS-PLALSRWSGVTPDIA---  257 (430)
T ss_dssp             HHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTTTCCCSEE---
T ss_pred             HHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc-hhhhhhhcCCCCcEE---
Confidence            7762   4445555655 66 8887 66888899999999999999999999998876654 2233333 2222333   


Q ss_pred             cCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh-----hhccccCCCchhHHHHHhhhh
Q 021547          253 SISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA-----CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       253 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +|||.++. | +|+||++++.        ++++.+..     ....++++++++|+++.+.|+
T Consensus       258 t~sK~l~~-G~~r~G~~~~~~--------~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~  311 (430)
T 3i4j_A          258 VLGKGLAA-GYAPLAGLLAAP--------QVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLD  311 (430)
T ss_dssp             EECGGGTT-TSSCCEEEEECH--------HHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             EEcccccC-CccccEEEEECH--------HHHHHHhccCCcccccCCCCCCHHHHHHHHHHHH
Confidence            68999875 9 9999999843        47888775     234567889999999888775

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.92  E-value=1.7e-24  Score=197.98  Aligned_cols=207  Identities=14%  Similarity=0.089  Sum_probs=159.9

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCCh
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGC  119 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~  119 (311)
                      .....++++.|.      +++++.+.+++.+.+..    .|.+  ..+..++|++++++++      .+++ +|++|+|+
T Consensus        16 ~~~~~~~~~~g~------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~g------~~~~~~i~~~~g~   79 (393)
T 2huf_A           16 VTPNKLLMGPGP------SNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYLFQ------TNNIATFCLSASG   79 (393)
T ss_dssp             CCCCCEECSSSC------CCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHHHT------CCCSEEEEESSCH
T ss_pred             CCCCeEEecCCC------CCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHhC------CCCCcEEEEcCcH
Confidence            345667777774      46788898888766542    2322  2456788888888883      3444 79999999


Q ss_pred             HHHHHHHHHHHhcCCCCEEEecCCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCC
Q 021547          120 MEAVEIILTVITRLGAANILLPRPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNP  196 (311)
Q Consensus       120 ~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~np  196 (311)
                      ++++.+++.+++++| |+|+++.|+|.++  ...++..|.+++.+++..  ++.+|++.|++.+++ +++++++++|+||
T Consensus        80 t~a~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~np  156 (393)
T 2huf_A           80 HGGMEATLCNLLEDG-DVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSS  156 (393)
T ss_dssp             HHHHHHHHHHHCCTT-CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred             HHHHHHHHHHHhCCC-CEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCC
Confidence            999999999999999 9999999999874  345567899999998753  457899999999887 8999999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCccc-CCCCcceeeEEEeeCCCC
Q 021547          197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR-WIVPGWRFGWLATNDPNG  275 (311)
Q Consensus       197 tG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~-~~~~G~r~G~i~~~~~~~  275 (311)
                      ||..++   +++|.++|+++|+++|+|++|...    .....+.   ..++.+++.|+||+ ++.+|+  ||++++.   
T Consensus       157 tG~~~~---l~~i~~~~~~~~~~li~D~a~~~~----~~~~~~~---~~~~d~~~~s~sK~l~g~~G~--G~~~~~~---  221 (393)
T 2huf_A          157 TGVLQG---LEGVGALCHQHNCLLIVDTVASLG----GAPMFMD---RWEIDAMYTGSQKVLGAPPGI--TPVSFSH---  221 (393)
T ss_dssp             TTEECC---CTTHHHHHHHTTCEEEEECTTTBT----TBCCCTT---TTTCSEEECCSSSTTCCCSSC--EEEEECH---
T ss_pred             ccccCC---HHHHHHHHHHcCCEEEEEcccccC----CCCcchh---hcCccEEEECCCcccccCCCe--EEEEECH---
Confidence            999999   899999999999999999998642    1111222   22356899999997 456776  9999853   


Q ss_pred             ccchhhHHHHHhh
Q 021547          276 VLQKSGIVGSIKA  288 (311)
Q Consensus       276 ~~~~~~~~~~~~~  288 (311)
                           +++++++.
T Consensus       222 -----~~~~~~~~  229 (393)
T 2huf_A          222 -----RAVERYKR  229 (393)
T ss_dssp             -----HHHHHHHT
T ss_pred             -----HHHHHHhh
Confidence                 36666654

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.92  E-value=2.1e-24  Score=197.24  Aligned_cols=206  Identities=13%  Similarity=0.050  Sum_probs=154.7

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEI  125 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~  125 (311)
                      +.+.|+.+.+     .++++.+.+++.+.+..  ...|....+..++|++++++++      .+++++++|+|+++++.+
T Consensus         8 ~~~yl~~~~~-----~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~t~g~t~a~~~   74 (392)
T 2z9v_A            8 DPVITLTAGP-----VNAYPEVLRGLGRTVLY--DYDPAFQLLYEKVVDKAQKAMR------LSNKPVILHGEPVLGLEA   74 (392)
T ss_dssp             CCSEECSSSC-----CCCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHTT------CSSCCEEESSCTHHHHHH
T ss_pred             CcceeecCCC-----cCCCHHHHHHHhccccc--cccHHHHHHHHHHHHHHHHHhC------CCCCEEEEeCCchHHHHH
Confidence            3455666553     36678898888776542  1112222346778888888873      356899999999999999


Q ss_pred             HHHHHhcCCCCEEEecCCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc--CCCccEEEEeCCCCCCccCC
Q 021547          126 ILTVITRLGAANILLPRPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA--DENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       126 ~~~~l~~~g~d~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l--~~~~~~i~i~~p~nptG~~~  201 (311)
                      ++.+++++| |+|+++.|+|+++  ...++..|.+++.++++.  ++.+|+++|++.+  .++++++++++|+||||..+
T Consensus        75 ~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~  151 (392)
T 2z9v_A           75 AAASLISPD-DVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY--NEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTIN  151 (392)
T ss_dssp             HHHHHCCTT-CCEEEEESSHHHHHHHHHHHHHCSCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEEC
T ss_pred             HHHHhcCCC-CEEEEecCCcccHHHHHHHHHcCCceEEeeCCC--CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceec
Confidence            999999999 9999999999875  345566899999998753  3468999999988  45789999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC-CCCcceeeEEEeeCCCCccchh
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW-IVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      +   +++|.++|+++|+++|+|++|+...    ....+..+   +..+++.|+||++ +.+|  +||+++++        
T Consensus       152 ~---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~---~~d~~~~s~sK~~~~~~g--~G~l~~~~--------  211 (392)
T 2z9v_A          152 P---IDAIGALVSAHGAYLIVDAVSSFGG----MKTHPEDC---KADIYVTGPNKCLGAPPG--LTMMGVSE--------  211 (392)
T ss_dssp             C---HHHHHHHHHHTTCEEEEECTTTBTT----BSCCGGGG---TCSEEEECSSSTTCCCSC--CEEEEECH--------
T ss_pred             c---HHHHHHHHHHcCCeEEEEcccccCC----cccccccc---cceEEEecCcccccCCCc--eeEEEECH--------
Confidence            9   8899999999999999999998421    11122222   2458999999964 3455  49999853        


Q ss_pred             hHHHHHh
Q 021547          281 GIVGSIK  287 (311)
Q Consensus       281 ~~~~~~~  287 (311)
                      +++++++
T Consensus       212 ~~~~~l~  218 (392)
T 2z9v_A          212 RAWAKMK  218 (392)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhh
Confidence            3566664

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.92  E-value=6.2e-24  Score=193.22  Aligned_cols=190  Identities=17%  Similarity=0.117  Sum_probs=150.1

Q ss_pred             CCcHHHHHHHHHHHhcCC---CCCCCC----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh---
Q 021547           62 RTAAVAEDAIVDSVRSSM---FNCYAP----MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT---  131 (311)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~---~~~Y~~----~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~---  131 (311)
                      ++++.+++++.+.+....   ...|..    ..+..++|++++++++      .+++++++|+|+++++.+++.++.   
T Consensus        11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~~~g~t~a~~~~~~~l~~~~   84 (382)
T 4eb5_A           11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVN------GGGGTVVFTSGATEANNLAIIGYAMRN   84 (382)
T ss_dssp             CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHT------CTTEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEcCchHHHHHHHHHHHHhhc
Confidence            678999999999886411   101332    1245678888888873      356799999999999999999998   


Q ss_pred             -cCCCCEEEecCCCCcchHHHHHH---cCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHH
Q 021547          132 -RLGAANILLPRPGWPFYESFAKR---NHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQ  207 (311)
Q Consensus       132 -~~g~d~Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~  207 (311)
                       ++| |+|+++.|+|+.+...+..   .|++++.++++  .++.+|+++|++.++++++++++++|+||||.+++   ++
T Consensus        85 ~~~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~  158 (382)
T 4eb5_A           85 ARKG-KHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VE  158 (382)
T ss_dssp             GGGC-CEEEEETTCCHHHHHHHHHHTTTTCEEEEECBC--TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HH
T ss_pred             cCCC-CEEEECCCcchHHHHHHHHHHhCCcEEEEeccC--CCCccCHHHHHHHhcCCCeEEEEeccCCCccccCC---HH
Confidence             899 9999999999988666543   69999999875  35678999999999888999999999999999999   88


Q ss_pred             HHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          208 KIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       208 ~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      +|.++|+++|++ |+|++|+.    +.....+..+   +..+++.|+||.++.+|  +||+++++.
T Consensus       159 ~i~~l~~~~~~~-i~D~a~~~----g~~~~~~~~~---~~di~~~s~sK~~g~~g--~G~~~~~~~  214 (382)
T 4eb5_A          159 EISEVLAGKAAL-HIDATASV----GQIEVDVEKI---GADMLTISSNDIYGPKG--VGALWIRKE  214 (382)
T ss_dssp             HHHHHHTTSSEE-EEECTTTB----TTBCCCHHHH---TCSEEEEETGGGTCCSS--CEEEEEETT
T ss_pred             HHHHHHHHCCCE-EEEcchhc----CCcccCcccc---CCCEEEeehHHhcCCCc--eEEEEEccc
Confidence            999999999999 99999983    1111122222   24589999999977666  799988764

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=99.92  E-value=6.6e-24  Score=197.29  Aligned_cols=246  Identities=15%  Similarity=0.054  Sum_probs=171.4

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.++||+.+.+....+. .+|.+.+++.+.+...  ..|....+..++++.+++++.+.++.+. .+++++|+|++++
T Consensus        41 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~ggsea  116 (439)
T 3dxv_A           41 NGRELIDLSGAWGAASLGY-GHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPGEG-THKIWFGHSGSDA  116 (439)
T ss_dssp             TSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTCTT-TEEEEEESSHHHH
T ss_pred             CCCEEEECCCchhhccCCC-CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCC-CCEEEEeCCHHHH
Confidence            4788999999976432222 7899999999998754  2465556777888888888888665332 1699999999999


Q ss_pred             HHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcCcE-E--------------EEeeccCCCCccc-----CHHHHHhh
Q 021547          123 VEIILTVIT--RLGAANILLPRPGWPFYESFAKRNHIE-V--------------RHFDLLPERGWEV-----DLEAVEAL  180 (311)
Q Consensus       123 ~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~g~~-~--------------~~~~~~~~~~~~~-----d~~~l~~~  180 (311)
                      +..++.++.  .++ +.|++..+.|+++...+...+.. .              ..++..  ..+..     |++.|++.
T Consensus       117 ~~~al~~~~~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~  193 (439)
T 3dxv_A          117 NEAAYRAIVKATGR-SGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR--PYRNDPTGDAILTLLTEK  193 (439)
T ss_dssp             HHHHHHHHHHHHSC-CEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS--CBTTBTTSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCC-CEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC--cccccccHHHHHHHHHHH
Confidence            999998863  355 78888888887655444333221 1              112211  11111     68999998


Q ss_pred             c----CCCccEEEEeCCCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547          181 A----DENTAAIVIINPCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS  255 (311)
Q Consensus       181 l----~~~~~~i~i~~p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s  255 (311)
                      +    .++++++++..++|++|.+.+ .+.+++|.++|++||++||+||+|.++.+.|.. ..+..+....+++   |+|
T Consensus       194 l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~-~~~~~~~~~~di~---s~s  269 (439)
T 3dxv_A          194 LAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRL-HCFEHEGFVPDIL---VLG  269 (439)
T ss_dssp             HHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSS-SGGGGTTCCCSEE---EEC
T ss_pred             HHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh-hHHHhcCCCCCEE---EEc
Confidence            8    456677777777788888665 445999999999999999999999976555532 2333333233333   999


Q ss_pred             ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |.++ +|+|+||++++.        ++++.+... ...++ +++++|+++.+.|+
T Consensus       270 K~~~-~G~riG~~~~~~--------~~~~~~~~~~~~~t~-~~~~~~~aa~aal~  314 (439)
T 3dxv_A          270 KGLG-GGLPLSAVIAPA--------EILDCASAFAMQTLH-GNPISAAAGLAVLE  314 (439)
T ss_dssp             GGGG-TTSCCEEEEEEH--------HHHTSCSSSSCCTTT-TCHHHHHHHHHHHH
T ss_pred             chhc-CCcceEEEEECH--------HHHhhhcCCCcCCCc-ccHHHHHHHHHHHH
Confidence            9998 599999999853        366666654 23456 89999988887765

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.92  E-value=5.2e-24  Score=197.12  Aligned_cols=239  Identities=14%  Similarity=0.085  Sum_probs=168.6

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.++||+.|......+. .+|.+.+++.+++....  .+.. .+..++++.+++.+.+.+|    .++|++|+|+++|
T Consensus        55 ~g~~~lD~~~~~~~~~lG~-~~p~v~~ai~~~~~~~~--~~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~ggteA  126 (420)
T 2pb2_A           55 QGKEYIDFAGGIAVTALGH-CHPALVEALKSQGETLW--HTSN-VFTNEPALRLGRKLIDATF----AERVLFMNSGTEA  126 (420)
T ss_dssp             TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCC--CCCT-TSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHH
T ss_pred             CCCEEEEccccccccccCC-CCHHHHHHHHHHHHhcc--cccC-ccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHHH
Confidence            4778899987721111122 67899999999986432  1211 1223456666666665444    4789999999999


Q ss_pred             HHHHHHHHhc-------CCCCEEEecCCCCcchH-HHHHHcCcE------------EEEeeccCCCCcccCHHHHHhhcC
Q 021547          123 VEIILTVITR-------LGAANILLPRPGWPFYE-SFAKRNHIE------------VRHFDLLPERGWEVDLEAVEALAD  182 (311)
Q Consensus       123 ~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~-~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~  182 (311)
                      +++++.++..       +|.++|++..|+|.++. ......|.+            +..++.       .|+++|++.++
T Consensus       127 ~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~  199 (420)
T 2pb2_A          127 NETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMD  199 (420)
T ss_dssp             HHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCC
T ss_pred             HHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhc
Confidence            9999998875       67349999999998764 344445543            344432       28999999998


Q ss_pred             CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC
Q 021547          183 ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP  261 (311)
Q Consensus       183 ~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~  261 (311)
                      ++++++++++++|++|. .++.+++++|.++|++||+++|+||+|.++.+.|..+ .+..+....+++   |+||.++ +
T Consensus       200 ~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~~~~~~dii---t~sK~l~-~  274 (420)
T 2pb2_A          200 DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDIL---TSAKALG-G  274 (420)
T ss_dssp             TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-T
T ss_pred             cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHhcCCCCCeE---Eeccccc-C
Confidence            88899888888888884 6999999999999999999999999998876655432 222222223444   7899988 8


Q ss_pred             cceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          262 GWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       262 G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |+|+||+++++        ++++.++.. ...+++.++++|+++.+.|+
T Consensus       275 G~~iG~~~~~~--------~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~  315 (420)
T 2pb2_A          275 GFPVSAMLTTQ--------EIASAFHVGSHGSTYGGNPLACAVAGAAFD  315 (420)
T ss_dssp             TSCCEEEEECH--------HHHTTCC----CCEECCCHHHHHHHHHHHH
T ss_pred             CCceEEEEEhH--------HHHHhhcCCCcCcccCcCHHHHHHHHHHHH
Confidence            99999999854        355555442 23456789999998887764

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=99.92  E-value=2.9e-24  Score=196.76  Aligned_cols=237  Identities=17%  Similarity=0.158  Sum_probs=165.5

Q ss_pred             CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMF--NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      .+..++||+.+.+..  .++ +++.+.+++.+.+.....  ..| +.....++++.+++++    +  ..+++|++|+|+
T Consensus        43 ~g~~~ld~~~~~~~~--~~g~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~--~~~~~v~~~~gg  113 (395)
T 1vef_A           43 EGNEYIDCVGGYGVA--NLGHGNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAIL----P--PELNRVFPVNSG  113 (395)
T ss_dssp             TSCEEEESSHHHHTC--TTCBTCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTS----C--TTEEEEEEESSH
T ss_pred             CCCEEEEccCccccc--cCCCCCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhc----C--CCcCEEEEcCcH
Confidence            356788998874321  132 789999999998864321  123 2233445555555554    3  356899999999


Q ss_pred             HHHHHHHHHHHh--cCCCCEEEecCCCCcc-hHHHHHHcCcE------------EEEeeccCCCCcccCHHHHHhhcCCC
Q 021547          120 MEAVEIILTVIT--RLGAANILLPRPGWPF-YESFAKRNHIE------------VRHFDLLPERGWEVDLEAVEALADEN  184 (311)
Q Consensus       120 ~~a~~~~~~~l~--~~g~d~Vl~~~p~~~~-~~~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~~~  184 (311)
                      ++++.+++.++.  .+| |.|++..|+|++ +...+...|.+            +..++.       .|+++|++.++++
T Consensus       114 ~~a~~~al~~~~~~~~~-~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~  185 (395)
T 1vef_A          114 TEANEAALKFARAHTGR-KKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-------NDVEALKRAVDEE  185 (395)
T ss_dssp             HHHHHHHHHHHHHHHSC-CEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-------TCHHHHHHHCCTT
T ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC-------CcHHHHHHHhccC
Confidence            999999998874  578 899999999865 44456666654            222221       4899999999888


Q ss_pred             ccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547          185 TAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW  263 (311)
Q Consensus       185 ~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~  263 (311)
                      +++++++.++||||..+ +.+++++|.++|++||++||+|++|.++.+.+... .+.......+++   |+||.++. |+
T Consensus       186 ~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~-~~~~~~~~~d~~---s~sK~~~~-g~  260 (395)
T 1vef_A          186 TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKALGG-GV  260 (395)
T ss_dssp             EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGGGT-TS
T ss_pred             EEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh-HhhhcCCCCCEE---EEcccccC-CC
Confidence            88877666678999764 78889999999999999999999999765444322 222222222333   88999986 99


Q ss_pred             eeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          264 RFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       264 r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |+||+++++        ++++.++.. ...+.++++++|+++.+.|+
T Consensus       261 ~~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~al~  299 (395)
T 1vef_A          261 PLGVAVMRE--------EVARSMPKGGHGTTFGGNPLAMAAGVAAIR  299 (395)
T ss_dssp             SCEEEEEEH--------HHHHTSCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred             ceEEEEehH--------HHHhhhccCCcCCCcCCCHHHHHHHHHHHH
Confidence            999999864        356665542 22345678888888776664

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.92  E-value=3.8e-24  Score=195.78  Aligned_cols=188  Identities=11%  Similarity=0.087  Sum_probs=147.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC--CCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHHHHHHHHHHhcCCCCE
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPM--FGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEAVEIILTVITRLGAAN  137 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a~~~~~~~l~~~g~d~  137 (311)
                      .++++.+.+++.+.+..    .|.+.  ....++|++++++++      .+++ +|++|+|+++++.+++.+++++| |+
T Consensus        27 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~g~t~al~~~~~~~~~~g-d~   95 (396)
T 2ch1_A           27 SNCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIFQ------TENRATMCVSGSAHAGMEAMLSNLLEEG-DR   95 (396)
T ss_dssp             CCCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHHT------CCCSCEEEESSCHHHHHHHHHHHHCCTT-CE
T ss_pred             CCCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHhC------CCCCcEEEECCcHHHHHHHHHHHhcCCC-Ce
Confidence            45678888877654421    35431  237889999999994      3556 79999999999999999999999 99


Q ss_pred             EEecCCCCcchH--HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547          138 ILLPRPGWPFYE--SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETAR  214 (311)
Q Consensus       138 Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~  214 (311)
                      |+++.|+|..+.  ..++..|.+++.++.+  .++.+|++++++.+++ +++++++++|+||||.+++   +++|.++|+
T Consensus        96 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~  170 (396)
T 2ch1_A           96 VLIAVNGIWAERAVEMSERYGADVRTIEGP--PDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICH  170 (396)
T ss_dssp             EEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHH
T ss_pred             EEEEcCCcccHHHHHHHHHcCCceEEecCC--CCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHH
Confidence            999999999985  4788899999999874  3567999999999887 8999999999999999999   899999999


Q ss_pred             HhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          215 KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       215 ~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      ++|++||+|++|+..   . ....+..+   +..+++.|++|.++. +.++|++++++
T Consensus       171 ~~~~~li~Dea~~~g---~-~~~~~~~~---~~d~~~~s~~K~~~~-~~g~g~~~~~~  220 (396)
T 2ch1_A          171 QHDCLLIVDAVASLC---G-VPFYMDKW---EIDAVYTGAQKVLGA-PPGITPISISP  220 (396)
T ss_dssp             HTTCEEEEECTTTBT---T-BCCCTTTT---TCCEEECCCC-CCCC-CSSCEEEEECH
T ss_pred             HcCCEEEEEcccccc---C-Cccchhhc---CcCEEEEcCCccccC-CCCeEEEEECH
Confidence            999999999999831   1 11222222   223777899997543 34569988853

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.91  E-value=1e-23  Score=196.87  Aligned_cols=202  Identities=17%  Similarity=0.130  Sum_probs=153.5

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec
Q 021547           62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLP  141 (311)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~  141 (311)
                      +.++.+.+++.    .. ...|.+..+..++|++++++++        .+++++|+|+++++..++.+++++| |  +++
T Consensus        55 ~~~~~~~~a~~----~~-~~~y~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~al~~l~~~g-d--i~~  118 (456)
T 2ez2_A           55 AMSDKQWAGMM----MG-DEAYAGSENFYHLERTVQELFG--------FKHIVPTHQGRGAENLLSQLAIKPG-Q--YVA  118 (456)
T ss_dssp             CCCHHHHHHHT----TC-CCCSSSCHHHHHHHHHHHHHHC--------CSEEEEESSHHHHHHHHHHHHCCTT-C--EEE
T ss_pred             cCCHHHHHHhh----cc-hhhcccChhHHHHHHHHHHHhC--------CCcEEEeCCcHHHHHHHHHHhCCCC-C--Eec
Confidence            44566666654    22 2368777789999999999994        3479999999999999999999999 8  788


Q ss_pred             CCCC-cchHHHHHHcCcEEEEeeccCC----C----CcccCHHHHHhhcCCCc----cEEEEeCCCC-CCccCCCHHHHH
Q 021547          142 RPGW-PFYESFAKRNHIEVRHFDLLPE----R----GWEVDLEAVEALADENT----AAIVIINPCN-PCGNVLTYQHLQ  207 (311)
Q Consensus       142 ~p~~-~~~~~~~~~~g~~~~~~~~~~~----~----~~~~d~~~l~~~l~~~~----~~i~i~~p~n-ptG~~~~~~~l~  207 (311)
                      .|+| ..+...++..|.+++.+++...    .    ++.+|+++|++.+++++    +++++++|+| |||.+++.++++
T Consensus       119 ~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~  198 (456)
T 2ez2_A          119 GNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMR  198 (456)
T ss_dssp             ESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred             cccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHH
Confidence            8999 7778899999999999987631    1    36789999999887654    8889999998 999999999999


Q ss_pred             HHHHHHHHhCCEEEEeccccC----------CccCCCCCCccc-ccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCc
Q 021547          208 KIAETARKLGILVIADEVYGH----------LAFGSTPYIPMG-VFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGV  276 (311)
Q Consensus       208 ~l~~l~~~~~~~li~D~ay~~----------~~~~~~~~~~~~-~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~  276 (311)
                      +|.++|++||++||+|++|..          +.+.+....++. .+....+++++ |++|. +++| +.||++++++   
T Consensus       199 ~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~-~~~~-~gG~~~~~~~---  272 (456)
T 2ez2_A          199 AVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKD-CLVN-IGGFLCMNDD---  272 (456)
T ss_dssp             HHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTT-TCCS-SCEEEEESCH---
T ss_pred             HHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCccc-CCCC-ceeEEEECCH---
Confidence            999999999999999999986          445554321110 01111234554 78887 4566 7899987443   


Q ss_pred             cchhhHHHHHhhh
Q 021547          277 LQKSGIVGSIKAC  289 (311)
Q Consensus       277 ~~~~~~~~~~~~~  289 (311)
                          ++++.++..
T Consensus       273 ----~~~~~~~~~  281 (456)
T 2ez2_A          273 ----EMFSSAKEL  281 (456)
T ss_dssp             ----HHHHHHHHH
T ss_pred             ----HHHHHHHHH
Confidence                366665543

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=99.91  E-value=1.7e-23  Score=193.95  Aligned_cols=244  Identities=17%  Similarity=0.111  Sum_probs=164.6

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF---NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      +++.++||+.+.+....+ ..+|.+.+++.+.+.....   ..|.. ....++++.+++++    +  ..+++|++|+|+
T Consensus        41 ~g~~ylD~~~~~~~~~lg-~~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----~--~~~~~v~~~~gg  112 (429)
T 1s0a_A           41 DGRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMT----P--QPLECVFLADSG  112 (429)
T ss_dssp             TSCEEEESSTTTTTCTTC-BSCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHS----C--TTCCEEEEESSH
T ss_pred             CCCEEEEcCccHhhccCC-CCCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhC----C--CCCCEEEEeCCH
Confidence            467788998886432222 2589999999998864321   12322 12345555555555    3  467899999999


Q ss_pred             HHHHHHHHHHHh---c----CCCCEEEecCCCCcchHHHHHH-cC-------------cEEEEeeccC---CCCc-ccCH
Q 021547          120 MEAVEIILTVIT---R----LGAANILLPRPGWPFYESFAKR-NH-------------IEVRHFDLLP---ERGW-EVDL  174 (311)
Q Consensus       120 ~~a~~~~~~~l~---~----~g~d~Vl~~~p~~~~~~~~~~~-~g-------------~~~~~~~~~~---~~~~-~~d~  174 (311)
                      ++++..++.++.   +    +| |+|++..|+|+++...+.. .+             .++..++...   ...+ .+|+
T Consensus       113 tea~~~ai~~~~~~~~~~g~~~-~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  191 (429)
T 1s0a_A          113 SVAVEVAMKMALQYWQAKGEAR-QRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDM  191 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCC-CEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGG
T ss_pred             HHHHHHHHHHHHHHhcccCCCC-CeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHH
Confidence            999999988764   2    58 9999999999876443322 11             1344444321   1123 4789


Q ss_pred             HHHHhhcC---CCccEEEEeCC--CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCe
Q 021547          175 EAVEALAD---ENTAAIVIINP--CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPV  248 (311)
Q Consensus       175 ~~l~~~l~---~~~~~i~i~~p--~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~  248 (311)
                      +.|++.++   ++++ +++++|  +||||. ..+.+++++|.++|++||+++|+||+|.++.+.|.. ..+.......++
T Consensus       192 ~~l~~~l~~~~~~~~-~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~-~~~~~~~~~~d~  269 (429)
T 1s0a_A          192 VGFARLMAAHRHEIA-AVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKL-FACEHAEIAPDI  269 (429)
T ss_dssp             HHHHHHHHHHTTTEE-EEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSE
T ss_pred             HHHHHHHHhCCCCEE-EEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchH-HHhhhcCCCCCE
Confidence            99999886   3444 455566  589996 667888999999999999999999999976554432 222222222333


Q ss_pred             EEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh------hccccCCCchhHHHHHhhhh
Q 021547          249 ITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC------LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       249 i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +   |+||.++ +| +|+||++++.        ++++.+...      ...++++|+++|+++.+.|+
T Consensus       270 ~---t~sK~l~-~G~~~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~  325 (429)
T 1s0a_A          270 L---CLGKALT-GGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAAANASLA  325 (429)
T ss_dssp             E---EECGGGG-TSSSCCEEEEECH--------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHH
T ss_pred             E---Eeccccc-CCCccceEEEeCH--------HHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHH
Confidence            3   7899987 58 9999999853        367777652      23456779999988877764

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.91  E-value=2.3e-23  Score=189.00  Aligned_cols=191  Identities=17%  Similarity=0.104  Sum_probs=144.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCCC---CCCCCCC----cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh--
Q 021547           61 FRTAAVAEDAIVDSVRSSMFN---CYAPMFG----LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT--  131 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~---~Y~~~~g----~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~--  131 (311)
                      .++++.+.+++.+.+......   .|....+    ..++++.+++++    |  ++++++++|+|+++++.+++.++.  
T Consensus        10 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~i~~~~g~~~a~~~~~~~~~~~   83 (382)
T 4hvk_A           10 KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV----N--GGGGTVVFTSGATEANNLAIIGYAMR   83 (382)
T ss_dssp             CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHT----T--CTTEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHc----C--CCcCeEEEECCchHHHHHHHHHhhhh
Confidence            467889999999988642110   1111111    224555555555    3  356789999999999999999998  


Q ss_pred             --cCCCCEEEecCCCCcchHHHHHH---cCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHH
Q 021547          132 --RLGAANILLPRPGWPFYESFAKR---NHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHL  206 (311)
Q Consensus       132 --~~g~d~Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l  206 (311)
                        ++| |+|+++.+.|+++...+..   .|.+++.++.+  .++.+|+++|++.++++++++++++|+||||..++   +
T Consensus        84 ~~~~g-d~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~  157 (382)
T 4hvk_A           84 NARKG-KHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---V  157 (382)
T ss_dssp             HGGGC-CEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC--TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---H
T ss_pred             hcCCC-CEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC--CCCCcCHHHHHHHhccCceEEEEECCCCCceeeCC---H
Confidence              899 9999999999988765444   69999999875  45679999999999999999999999999999999   8


Q ss_pred             HHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          207 QKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       207 ~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      ++|.++|++||+ +|+|++|+...    ....+...   +..+++.|+||.+|.+|  +|++++++.
T Consensus       158 ~~i~~l~~~~~~-li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~g~~g--~g~~~~~~~  214 (382)
T 4hvk_A          158 EEISEVLAGKAA-LHIDATASVGQ----IEVDVEKI---GADMLTISSNDIYGPKG--VGALWIRKE  214 (382)
T ss_dssp             HHHHHHHSSSSE-EEEECTTTBTT----BCCCHHHH---TCSEEEEESGGGTSCTT--CEEEEEETT
T ss_pred             HHHHHHHHHcCE-EEEEhHHhcCC----CCCCchhc---CCCEEEEeHHHhcCCCc--eEEEEEcCc
Confidence            899999999999 99999987521    11122211   23489999999877666  677776654

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.91  E-value=1.7e-23  Score=191.75  Aligned_cols=238  Identities=16%  Similarity=0.119  Sum_probs=169.1

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.++||+.+.+....+ ..+|.+.+++.+.+..... .|  ..+..+.++.+++++.+.+|    .+++++|+|++++
T Consensus        34 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~-~~--~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ea  105 (395)
T 3nx3_A           34 KAKKYLDFSSGIGVCALG-YNHAKFNAKIKAQVDKLLH-TS--NLYYNENIAAAAKNLAKASA----LERVFFTNSGTES  105 (395)
T ss_dssp             TCCEEEESSHHHHTCTTC-BSCHHHHHHHHHHHTTCSC-CC--TTSBCHHHHHHHHHHHHHHT----CSEEEEESSHHHH
T ss_pred             CCCEEEECCCcHHhccCC-CCCHHHHHHHHHHHHhccc-cc--cccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence            478899999884321111 2679999999998864321 12  12334455555555555433    5799999999999


Q ss_pred             HHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcC-------------cEEEEeeccCCCCcccCHHHHHhhcC
Q 021547          123 VEIILTVITR-------LGAANILLPRPGWPFYESFAKRNH-------------IEVRHFDLLPERGWEVDLEAVEALAD  182 (311)
Q Consensus       123 ~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~d~~~l~~~l~  182 (311)
                      +..++..+..       ++ ++|++..|+|+++...+...+             .++..++.       .|+++|++.++
T Consensus       106 ~~~al~~~~~~~~~~g~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~  177 (395)
T 3nx3_A          106 IEGAMKTARKYAFNKGVKG-GQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVN  177 (395)
T ss_dssp             HHHHHHHHHHHHHHTTCTT-CEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCC
T ss_pred             HHHHHHHHHHHhhccCCCC-CEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhcc
Confidence            9999988763       36 999999999987654333332             23444432       27999999998


Q ss_pred             CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC
Q 021547          183 ENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP  261 (311)
Q Consensus       183 ~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~  261 (311)
                      ++++++++..++|++|.. ++++++++|.++|++||+++|+||+|.++...|.. .....++..   ..+.++||.++. 
T Consensus       178 ~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~~~---~d~~t~sK~~~~-  252 (395)
T 3nx3_A          178 EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKF-FAYEHAQIL---PDIMTSAKALGC-  252 (395)
T ss_dssp             TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCC---CSEEEECGGGTT-
T ss_pred             CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcc-hhHHhcCCC---CCEEEecccccC-
Confidence            888888888877777775 78888999999999999999999999987655432 222222222   223478999875 


Q ss_pred             cceeeEEEeeCCCCccchhhH-HHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          262 GWRFGWLATNDPNGVLQKSGI-VGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       262 G~r~G~i~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |+|+||+++++        ++ ++.++.. ...+++.++++|+++.+.|+
T Consensus       253 G~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~  294 (395)
T 3nx3_A          253 GLSVGAFVINQ--------KVASNSLEAGDHGSTYGGNPLVCAGVNAVFE  294 (395)
T ss_dssp             TSCCEEEEECH--------HHHHHHSCTTCCSSCBSCCHHHHHHHHHHHH
T ss_pred             CCceEEEEEch--------hhhhhhcCCcccCCCCCCCHHHHHHHHHHHH
Confidence            99999999853        36 6777655 33567889999999888775

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.91  E-value=7.1e-24  Score=190.71  Aligned_cols=187  Identities=19%  Similarity=0.146  Sum_probs=144.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL  140 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~  140 (311)
                      .++++.+.+++.+.+...  ..|....+..++|++++++++      .+++++++|+|+++++..++.++.++| |+|++
T Consensus        10 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~g------~~~~~i~~~~g~t~a~~~~~~~~~~~g-d~vl~   80 (352)
T 1iug_A           10 VRLHPKALEALARPQLHH--RTEAAREVFLKARGLLREAFR------TEGEVLILTGSGTLAMEALVKNLFAPG-ERVLV   80 (352)
T ss_dssp             CCCCHHHHHHHHSCCCCT--TSHHHHHHHHHHHHHHHHHHT------CSSEEEEEESCHHHHHHHHHHHHCCTT-CEEEE
T ss_pred             CCCCHHHHHHhccCCCCc--cCHHHHHHHHHHHHHHHHHhC------CCCceEEEcCchHHHHHHHHHhccCCC-CeEEE
Confidence            567899999988766421  112222356789999999884      356799999999999999999999999 99999


Q ss_pred             cCCCCcchH--HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh--
Q 021547          141 PRPGWPFYE--SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL--  216 (311)
Q Consensus       141 ~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~--  216 (311)
                      +.|+|+++.  ..++..|.+++.++.+.  ++.+|++++++   ++++++++++|+||||.+++   +++|.++|+++  
T Consensus        81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~  152 (352)
T 1iug_A           81 PVYGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNP  152 (352)
T ss_dssp             EECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCT
T ss_pred             EeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCC
Confidence            999999865  45567899999998743  45678888877   67899999999999999999   88999999999  


Q ss_pred             CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          217 GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       217 ~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      |+++|+|++|+..    .....+..+   +..+++.|+||+++.+ .++||+++++
T Consensus       153 ~~~li~D~a~~~~----~~~~~~~~~---~~d~~~~s~~K~~~~~-~g~G~~~~~~  200 (352)
T 1iug_A          153 EGLVGADMVTSLL----VGEVALEAM---GVDAAASGSQKGLMCP-PGLGFVALSP  200 (352)
T ss_dssp             TCEEEEECTTTBT----TBCCCSGGG---TCSEEEEESSSTTCCC-SCEEEEEECH
T ss_pred             CCEEEEECCcccc----Ccceecccc---CeeEEEecCcccccCC-CceeEEEECH
Confidence            9999999999741    111122222   2458899999954433 3479998854

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.91  E-value=1.1e-23  Score=189.83  Aligned_cols=203  Identities=12%  Similarity=0.062  Sum_probs=150.5

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      .+.+|+|+.+.+     .++++.+.+++.+.+.. ....|.......++++.+++++    |   ...+|++|+|+++++
T Consensus         6 ~~~~id~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----g---~~~~v~~~~~gt~a~   72 (356)
T 1v72_A            6 RPPALGFSSDNI-----AGASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIF----E---RDVEVFLVPTGTAAN   72 (356)
T ss_dssp             CCCCCBCSCGGG-----CCCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHH----T---SCCEEEEESCHHHHH
T ss_pred             CCceEeeccCCc-----cCCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHh----C---CCCcEEEeCCccHHH
Confidence            467899998863     45789999999887632 1234554444455666666655    3   234699999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHH--HHHc--CcEEEEeeccCCCCcccCHHHHHh-hcCC-------CccEEEEe
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESF--AKRN--HIEVRHFDLLPERGWEVDLEAVEA-LADE-------NTAAIVII  191 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~--~~~~--g~~~~~~~~~~~~~~~~d~~~l~~-~l~~-------~~~~i~i~  191 (311)
                      .+++.++.++| |+|+++.|+|..+...  +...  |.+++.++..   ++.+|+++|++ .+++       ++++++++
T Consensus        73 ~~al~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~  148 (356)
T 1v72_A           73 ALCLSAMTPPW-GNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSIT  148 (356)
T ss_dssp             HHHHHTSCCTT-EEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEE
T ss_pred             HHHHHHhcCCC-CEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEE
Confidence            99999999999 9999999999876554  6666  9999988763   36799999999 8875       67899999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc--cCCCCCCcccccCCCCCeEEEecCcccCCCCcceee--E
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA--FGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG--W  267 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~--~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G--~  267 (311)
                      +|+| ||.+++.+++++|.++|++||+++|+|++|..+.  +.+.....+. +....+ +++.|+||. ++   |+|  |
T Consensus       149 ~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~d-~~~~s~sK~-g~---~~G~g~  221 (356)
T 1v72_A          149 QATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMT-WKAGVD-ALSFGATKN-GV---LAAEAI  221 (356)
T ss_dssp             SSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTT-GGGTCC-EEEECCGGG-TC---SSCEEE
T ss_pred             cCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhh-hhhcCC-EEEEecccC-CC---cCccEE
Confidence            9876 9999999999999999999999999999997532  2222222211 111122 445699998 43   555  7


Q ss_pred             EEe
Q 021547          268 LAT  270 (311)
Q Consensus       268 i~~  270 (311)
                      +++
T Consensus       222 ~~~  224 (356)
T 1v72_A          222 VLF  224 (356)
T ss_dssp             EES
T ss_pred             EEE
Confidence            766

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.91  E-value=3.9e-23  Score=189.41  Aligned_cols=190  Identities=19%  Similarity=0.119  Sum_probs=152.1

Q ss_pred             CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEE
Q 021547           86 MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRH  161 (311)
Q Consensus        86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~  161 (311)
                      .+...++++++++++..        +++++++++++++..++.+++++| |+|+++.|.|.++...    ++..|.+++.
T Consensus        58 ~~~~~~l~~~la~~~g~--------~~~i~~~sG~~ai~~~~~~~~~~g-d~vl~~~~~y~~~~~~~~~~~~~~g~~~~~  128 (389)
T 3acz_A           58 NPTVEQFEEMVCSIEGA--------AGSAAFGSGMGAISSSTLAFLQKG-DHLIAGDTLYGCTVSLFTHWLPRFGIEVDL  128 (389)
T ss_dssp             CHHHHHHHHHHHHHHTC--------SEEEEESSHHHHHHHHHTTTCCTT-CEEEEESSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             ChHHHHHHHHHHHHhCC--------CeEEEeCCHHHHHHHHHHHHhCCC-CEEEEeCCCchHHHHHHHHHHHHcCCEEEE
Confidence            34567899999999832        367777778899999999999999 9999999999986554    6789999999


Q ss_pred             eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547          162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV  241 (311)
Q Consensus       162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~  241 (311)
                      ++.       .|++.+++.++++++++++++|+||||.+++   +++|.++|+++|+++|+|++|..+.+. .   ++. 
T Consensus       129 v~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~-~---~~~-  193 (389)
T 3acz_A          129 IDT-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL-K---PLE-  193 (389)
T ss_dssp             ECT-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC-C---GGG-
T ss_pred             ECC-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc-C---ccc-
Confidence            875       3899999999999999999999999999998   999999999999999999999875432 1   221 


Q ss_pred             cCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          242 FGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       242 ~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                         .+..+++.|+||.++++|.|+ ||++++++       +++++++.... .+...+++.++++.+.++
T Consensus       194 ---~~~di~~~S~sK~~~~~~~~~~G~v~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~  253 (389)
T 3acz_A          194 ---LGADIALHSVSKYINGHGDVIGGVSSAKTA-------EDIATIKFYRKDAGSLMAPMDAFLCARGMK  253 (389)
T ss_dssp             ---TTCSEEEEETTTTTTCSSCCCCEEEEESSH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred             ---cCCeEEEECChhhccCCCCceeEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHcCcc
Confidence               234599999999999999998 99988641       36676665543 344567777776655543

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.91  E-value=1.1e-23  Score=191.24  Aligned_cols=195  Identities=19%  Similarity=0.205  Sum_probs=158.6

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEe
Q 021547           62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILL  140 (311)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~  140 (311)
                      +.++++.+++.+.+...   .|.+..+..++|+.+++++.        .+++++++|+++|+..++.++ .++| |+|++
T Consensus        13 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~~~g-d~Vi~   80 (367)
T 3nyt_A           13 RIKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGVGPG-DEVIT   80 (367)
T ss_dssp             HHHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCCTT-CEEEE
T ss_pred             ccCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCCCCc-CEEEE
Confidence            34678888888887754   45566788999999999994        247999999999999999999 7899 99999


Q ss_pred             cCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEE
Q 021547          141 PRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV  220 (311)
Q Consensus       141 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~l  220 (311)
                      +.++|..+...++..|.+++.+++++ +++.+|++.+++.+++++++++   |+||+|...+   +++|.++|+++|+++
T Consensus        81 ~~~~~~~~~~~~~~~G~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~---~~~i~~la~~~~~~l  153 (367)
T 3nyt_A           81 PGFTYVATAETVALLGAKPVYVDIDP-RTYNLDPQLLEAAITPRTKAII---PVSLYGQCAD---FDAINAIASKYGIPV  153 (367)
T ss_dssp             ESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCCB
T ss_pred             CCCccHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHhcCcCCcEEE---eeCCccChhh---HHHHHHHHHHcCCEE
Confidence            99999999999999999999998754 3478999999999988888777   7889998887   999999999999999


Q ss_pred             EEeccccC-CccCCCCCCcccccCCCCCeEEEecC--cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547          221 IADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSI--SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       221 i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  290 (311)
                      |+|++|+. ..+++.....   +.    .+.+.||  +|.++.+|. .|+++++++       ++.++++...
T Consensus       154 i~D~a~~~g~~~~~~~~~~---~~----di~~~Sf~~~K~l~~~g~-gg~~~~~~~-------~l~~~~~~~~  211 (367)
T 3nyt_A          154 IEDAAQSFGASYKGKRSCN---LS----TVACTSFFPSAPLGCYGD-GGAIFTNDD-------ELATAIRQIA  211 (367)
T ss_dssp             EEECTTTTTCEETTEETTS---SS----SEEEEECCTTSSSCCSSC-CEEEEESCH-------HHHHHHHHHT
T ss_pred             EEECccccCCeECCeeccC---CC----CEEEEECCCCCcCCCcCc-eeEEEeCCH-------HHHHHHHHHH
Confidence            99999985 3444432222   21    3888897  899887677 889888653       3667666543

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.91  E-value=5.8e-23  Score=188.43  Aligned_cols=189  Identities=21%  Similarity=0.142  Sum_probs=153.9

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~  162 (311)
                      +...++++.+++++.        .+++++++|+++|+..++.+++++| |+|+++.|.|.++...+    +..|.+++.+
T Consensus        66 ~~~~~l~~~la~~~g--------~~~~~~~~sGt~A~~~al~~~~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v  136 (392)
T 3qhx_A           66 PTRTALEAALAAVED--------AAFGRAFSSGMAAADCALRAMLRPG-DHVVIPDDAYGGTFRLIDKVFTGWNVEYTPV  136 (392)
T ss_dssp             HHHHHHHHHHHHHTT--------CSEEEEESSHHHHHHHHHHHHCCTT-CEEEEETTCCHHHHHHHHHTGGGGTCEEEEE
T ss_pred             hHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCC-CEEEEeCCCcchHHHHHHHHHHhcCcEEEEe
Confidence            456788888888873        2478999999999999999999999 99999999999876665    6789999988


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      +..       |++.+++.++++++++++++|+||||.+.+   +++|.++|+++|+++|+|++|+.....    .++ . 
T Consensus       137 ~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~----~~~-~-  200 (392)
T 3qhx_A          137 ALA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQ----QPL-S-  200 (392)
T ss_dssp             CTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC----CGG-G-
T ss_pred             CCC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccC----ChH-H-
Confidence            753       899999999999999999999999999998   999999999999999999999854321    111 1 


Q ss_pred             CCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          243 GSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                        .+..+++.|+||.++.+| +|+||++++++       ++++.++.... .+...+++.++++.+.++
T Consensus       201 --~~~di~~~S~sK~lg~~g~~~~G~v~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~  260 (392)
T 3qhx_A          201 --LGADVVLHSTTKYIGGHSDVVGGALVTNDE-------ELDQSFAFLQNGAGAVPGPFDAYLTMRGLK  260 (392)
T ss_dssp             --GTCSEEEEETTTTTTCSSCCCCEEEEESCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred             --hCCcEEEEcCccccCCCCCceEEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence              123499999999999888 89999998653       36677766533 456778888888776654

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.91  E-value=4.3e-23  Score=190.61  Aligned_cols=195  Identities=17%  Similarity=0.210  Sum_probs=153.1

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCc----HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCE
Q 021547           63 TAAVAEDAIVDSVRSSMFNCYAPMFGL----PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAAN  137 (311)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~----~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~  137 (311)
                      .++.+.+++.+.+.......|++..|.    .++++.+++++    |.+    ++++++++++++.+++.++ +++| |+
T Consensus        14 ~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~----g~~----~~i~~~~gt~al~~~~~~~~~~~g-d~   84 (418)
T 2c81_A           14 HSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFN----GVP----YCVPTTSGSTALMLALEALGIGEG-DE   84 (418)
T ss_dssp             CCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHH----TCS----EEEEESCHHHHHHHHHHHTTCCTT-CE
T ss_pred             CCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHh----CCC----cEEEeCCHHHHHHHHHHHcCCCCc-CE
Confidence            478999999999876544347776674    55555555555    322    5677777899999999999 8899 99


Q ss_pred             EEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC
Q 021547          138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG  217 (311)
Q Consensus       138 Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~  217 (311)
                      |+++.|+|..+...++..|.+++.+++++ +++.+|++.+++.+++++++++++   ||||...+   +++|.++|+++|
T Consensus        85 Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~---~~~i~~~~~~~~  157 (418)
T 2c81_A           85 VIVPSLTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIPV---HLFGSMAN---MDEINEIAQEHN  157 (418)
T ss_dssp             EEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECCB---CCTTCCCC---HHHHHHHHHHTT
T ss_pred             EEECCCccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEEe---CCcCCccc---HHHHHHHHHHCC
Confidence            99999999999999999999999998753 367899999999998888888754   58998876   999999999999


Q ss_pred             CEEEEeccccCCc-cCCCCCCcccccCCCCCeEEEecC--cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547          218 ILVIADEVYGHLA-FGSTPYIPMGVFGSIVPVITLGSI--SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       218 ~~li~D~ay~~~~-~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      ++||+|++|+.+. +++.+.   ..+.    .+.+.||  ||.++. | |+||++++++       +++++++..
T Consensus       158 ~~li~D~a~~~~~~~~~~~~---~~~~----~~~~~s~s~~K~~~~-g-~~g~~~~~~~-------~l~~~~~~~  216 (418)
T 2c81_A          158 LFVIEDCAQSHGSVWNNQRA---GTIG----DIGAFSCQQGKVLTA-G-EGGIIVTKNP-------RLFELIQQL  216 (418)
T ss_dssp             CEEEEECTTCTTCEETTEET---TSSS----SEEEEECCTTSSSCS-S-SCEEEEESCH-------HHHHHHHHH
T ss_pred             CEEEEECcccccCccCCEec---cccc----ceEEEeccCCcccCC-C-CeEEEEECCH-------HHHHHHHHH
Confidence            9999999999875 544322   1221    2777787  999887 8 9999998543       366666544

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.91  E-value=2.3e-23  Score=191.46  Aligned_cols=225  Identities=20%  Similarity=0.139  Sum_probs=156.3

Q ss_pred             cCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHH
Q 021547           50 LGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA--PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIIL  127 (311)
Q Consensus        50 ~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~  127 (311)
                      .+.+.|.........+.+.+++...........|.  +.....++++.+++++..        ++.++++++++++..++
T Consensus        26 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~--------~~~i~~~sG~~a~~~~l   97 (398)
T 1gc0_A           26 GALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGG--------EAGLALASGMGAITSTL   97 (398)
T ss_dssp             TBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTC--------SEEEEESSHHHHHHHHH
T ss_pred             CCcCCCccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCC--------CcEEEECCHHHHHHHHH
Confidence            34455543333344455555543211111111233  344667888888888832        25666666689999999


Q ss_pred             HHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          128 TVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       128 ~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      .+++++| |+|+++.|.|.++...+    +..|.+++.++.       .|++++++.++++++++++++|+||||.+++ 
T Consensus        98 ~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~-  168 (398)
T 1gc0_A           98 WTLLRPG-DEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-------ADLQALEAAMTPATRVIYFESPANPNMHMAD-  168 (398)
T ss_dssp             HHHCCTT-CEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC-
T ss_pred             HHHhcCC-CEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-------CCHHHHHHhcCCCCeEEEEECCCCCCccccc-
Confidence            9999999 99999999999887665    677889888875       2899999999999999999999999999998 


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhH
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGI  282 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~  282 (311)
                        +++|.++|+++|+++|+|++|....+..    ++ .   .+..+++.|+||.++.+|.|+ ||+++++        ++
T Consensus       169 --l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~-~---~~~d~~~~S~sK~~~~~~~~~~G~l~~~~--------~~  230 (398)
T 1gc0_A          169 --IAGVAKIARKHGATVVVDNTYCTPYLQR----PL-E---LGADLVVHSATKYLSGHGDITAGIVVGSQ--------AL  230 (398)
T ss_dssp             --HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG-G---GTCSEEEEETTTTTTCSSSCCCEEEEECH--------HH
T ss_pred             --HHHHHHHHHHcCCEEEEECCCcccccCC----ch-h---hCceEEEECCccccCCCCCCeEEEEEECh--------HH
Confidence              9999999999999999999999754421    12 1   124599999999999999998 9988753        23


Q ss_pred             HH-HHhhhhc--cccCCCchhHHHHHhhhh
Q 021547          283 VG-SIKACLG--VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       283 ~~-~~~~~~~--~~~~~~~~~q~~~~~~l~  309 (311)
                      +. .++....  .+...+++.++++.+.++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  260 (398)
T 1gc0_A          231 VDRIRLQGLKDMTGAVLSPHDAALLMRGIK  260 (398)
T ss_dssp             HHHHHHTHHHHHTCCCCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHhhccCCCCCCHHHHHHHHhccc
Confidence            33 4444422  245678888887766554

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=99.91  E-value=2e-23  Score=194.99  Aligned_cols=250  Identities=19%  Similarity=0.138  Sum_probs=173.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.+|||..|.+....+ ..+|.+.+++.+++...  ..|....+..+.+..+++++.+.++.. ..++|++|+|+++|
T Consensus        62 ~G~~ylD~~~~~~~~~lG-h~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA  137 (453)
T 4ffc_A           62 DGNSFIDLGAGIAVTTVG-ASHPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAEA  137 (453)
T ss_dssp             TSCEEEESSHHHHTCTTC-TTCHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHHH
T ss_pred             CCCEEEEcCCCcccCcCC-CCCHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHHH
Confidence            477889998773221111 24899999999998754  245544456677777777777765522 25789999999999


Q ss_pred             HHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcCc--------------EEEEeeccC--CCCcccC--------HHHH
Q 021547          123 VEIILTVITR-LGAANILLPRPGWPFYESFAKRNHI--------------EVRHFDLLP--ERGWEVD--------LEAV  177 (311)
Q Consensus       123 ~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~--~~~~~~d--------~~~l  177 (311)
                      ++.+++.+.. +|.++|++..++|+++...+...+.              .+..++...  .+.++.+        ++.|
T Consensus       138 ~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l  217 (453)
T 4ffc_A          138 VENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRI  217 (453)
T ss_dssp             HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHH
Confidence            9999987753 3438999999999877654443321              344444321  1112222        4667


Q ss_pred             HhhcCCCccEEEEeCCCCCCc--cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547          178 EALADENTAAIVIINPCNPCG--NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS  255 (311)
Q Consensus       178 ~~~l~~~~~~i~i~~p~nptG--~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s  255 (311)
                      ++.+..+..+++++.|.|++|  ...+++.+++|.++|++||+++|+||+|.++.+.|. ......+...   ..+.+||
T Consensus       218 ~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~-~~a~~~~~~~---pdi~t~s  293 (453)
T 4ffc_A          218 ETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGA-WFASEHEGIV---PDIVTMA  293 (453)
T ss_dssp             HHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSTHHHHTCC---CSEEEEC
T ss_pred             HHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccc-cchhhhcCCC---cchHhhh
Confidence            776666677888888877766  455778899999999999999999999998766553 2222222222   2244789


Q ss_pred             ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |.++. |+|+||++++.        ++++.+... ...+++.++++|+++.+.|+
T Consensus       294 K~~~~-G~~~G~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aal~  339 (453)
T 4ffc_A          294 KGIAG-GMPLSAVTGRA--------ELMDAVYAGGLGGTYGGNPVTCAAAVAALG  339 (453)
T ss_dssp             GGGGT-TSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred             hhhcC-CcCeEEEEECH--------HHHhhhcccCcCCCCCcCHHHHHHHHHHHH
Confidence            99876 99999998853        466666654 33567889999999888775

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.91  E-value=1.3e-23  Score=194.96  Aligned_cols=248  Identities=15%  Similarity=0.077  Sum_probs=163.4

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .++.++||+.+.+....+. .+|.+.+++.+.+.....  +. ..+..+.+..+++.+.+.++.  ..++|++|+|++++
T Consensus        41 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~--~~-~~~~~~~~~~l~~~la~~~~~--~~~~v~~~~gg~ea  114 (433)
T 1zod_A           41 DGRAILDFTSGQMSAVLGH-CHPEIVSVIGEYAGKLDH--LF-SEMLSRPVVDLATRLANITPP--GLDRALLLSTGAES  114 (433)
T ss_dssp             TCCEEEETTHHHHTCTTCB-TCHHHHHHHHHHHHHCCC--CC-TTCCCHHHHHHHHHHHHHSCT--TCCEEEEESCHHHH
T ss_pred             CCCEEEEcccchhccccCC-CCHHHHHHHHHHHHhCcc--cc-cccCCHHHHHHHHHHHHhCCC--CcCEEEEeCchHHH
Confidence            4667889877643221122 578999999998865321  11 122234555555555555543  46899999999999


Q ss_pred             HHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcC------------cEEEEeeccC--CCCc--------ccCHHHHHh
Q 021547          123 VEIILTVITR-LGAANILLPRPGWPFYESFAKRNH------------IEVRHFDLLP--ERGW--------EVDLEAVEA  179 (311)
Q Consensus       123 ~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g------------~~~~~~~~~~--~~~~--------~~d~~~l~~  179 (311)
                      +..+++.+.. +|.++|++..|+|+++...+....            ..+..++...  ...+        .+|++.|++
T Consensus       115 ~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~  194 (433)
T 1zod_A          115 NEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFD  194 (433)
T ss_dssp             HHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHH
Confidence            9999987642 332799999999987654333220            1233333211  1112        246899998


Q ss_pred             hcCC---CccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecC
Q 021547          180 LADE---NTAAIVIINP-CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSI  254 (311)
Q Consensus       180 ~l~~---~~~~i~i~~p-~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~  254 (311)
                      .+++   +...+++++| +||||. .++++++++|.++|++||++||+||+|.++.+.|.. ..+..+....+   +.|+
T Consensus       195 ~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~-~~~~~~~~~~d---i~s~  270 (433)
T 1zod_A          195 LIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTM-FACQRDGVTPD---ILTL  270 (433)
T ss_dssp             HHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCS---EEEE
T ss_pred             HHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchH-hHHhhcCCCCC---EEEe
Confidence            8762   2334455666 588996 678899999999999999999999999987655432 22222222223   3489


Q ss_pred             cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh---hccccCCCchhHHHHHhhhh
Q 021547          255 SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC---LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       255 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ||.|+. |+|+||+++++        ++++.+...   ...+++.++++|+++.+.|+
T Consensus       271 sK~~~~-G~~ig~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~  319 (433)
T 1zod_A          271 SKTLGA-GLPLAAIVTSA--------AIEERAHELGYLFYTTHVSDPLPAAVGLRVLD  319 (433)
T ss_dssp             CHHHHT-TSSCEEEEECH--------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             cccccC-CCCeeEEEEhH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            999986 99999999854        367777652   12456789999988877764

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.91  E-value=7.3e-24  Score=191.39  Aligned_cols=199  Identities=13%  Similarity=0.123  Sum_probs=152.3

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-C-CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP-M-FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~-~-~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      ++++|+.| |     .++++.+.+++.+.+.    +.|.. . .+..++|++++++++.    +.+.+++++|+|+++++
T Consensus         4 ~~~~~~~g-p-----~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g~----~~~~~~v~~~~g~t~a~   69 (366)
T 1m32_A            4 NYLLLTPG-P-----LTTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALATA----SEGYTSVLLQGSGSYAV   69 (366)
T ss_dssp             -CEECSSS-S-----CCCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHCS----SSSEEEEEEESCHHHHH
T ss_pred             ccccccCC-C-----cCCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhCC----CCcCcEEEEecChHHHH
Confidence            36899988 4     2467889888876431    12221 1 6889999999999941    22335799999999999


Q ss_pred             HHHHHHHhcCCCCEEEecC-CCCcc-hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC--CccEEEEeCCCCCCcc
Q 021547          124 EIILTVITRLGAANILLPR-PGWPF-YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE--NTAAIVIINPCNPCGN  199 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~-p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~i~i~~p~nptG~  199 (311)
                      .+++.+++++| |+|++.. ++|.. +...++..|.+++.+++.  .++.+|+++|++.+++  +++++++++|+||||.
T Consensus        70 ~~~~~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~  146 (366)
T 1m32_A           70 EAVLGSALGPQ-DKVLIVSNGAYGARMVEMAGLMGIAHHAYDCG--EVARPDVQAIDAILNADPTISHIAMVHSETTTGM  146 (366)
T ss_dssp             HHHHHHSCCTT-CCEEEEESSHHHHHHHHHHHHHTCCEEEEECC--TTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTE
T ss_pred             HHHHHHhcCCC-CeEEEEeCCCccHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCeEEEEEecccCCcce
Confidence            99999999999 9888775 66654 667788899999999874  3456899999998865  5789999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       200 ~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      +++   +++|.++|++||+++|+|++|+....    ...+.   ..+..+++.|+||+++.+ .++||+++++
T Consensus       147 ~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~---~~~~di~~~s~~K~~~~~-~g~G~~~~~~  208 (366)
T 1m32_A          147 LNP---IDEVGALAHRYGKTYIVDAMSSFGGI----PMDIA---ALHIDYLISSANKCIQGV-PGFAFVIARE  208 (366)
T ss_dssp             ECC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTT---TTTCSEEEEESSSTTCCC-SSEEEEEEEH
T ss_pred             ecC---HHHHHHHHHHcCCEEEEECCccccCc----Ccccc---ccCccEEEecCcccccCC-CceEEEEECH
Confidence            999   89999999999999999999985321    11222   223459999999976432 4579999864

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.91  E-value=1.5e-23  Score=192.02  Aligned_cols=202  Identities=16%  Similarity=0.079  Sum_probs=150.3

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCCC----CCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS---MFNCYAPM----FGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~---~~~~Y~~~----~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      .+++|.|+.+.+     .++++.+.+++.+.+...   ....|...    ....++++.+++++    |  +++++|++|
T Consensus        18 ~~~~iyld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~~~~~v~~~   86 (400)
T 3vax_A           18 GSHMTYLDAAAT-----TRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTV----S--AEPDELIFT   86 (400)
T ss_dssp             ----CCCCCCCC-----SSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHT----T--CCGGGEEEE
T ss_pred             cCCcEEecCCCC-----CCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHc----C--CCCCcEEEe
Confidence            567788887763     367899999999887531   11012111    12345555555555    3  356799999


Q ss_pred             CChHHHHHHHHHHHh----cCCCC-EEEecCCCCcchHHHHHH---cCcEEEEeeccCCCCcccCHHHHHhhcCCCccEE
Q 021547          117 LGCMEAVEIILTVIT----RLGAA-NILLPRPGWPFYESFAKR---NHIEVRHFDLLPERGWEVDLEAVEALADENTAAI  188 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~----~~g~d-~Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i  188 (311)
                      +|+++++.+++.+++    ++| | +|+++.+.|+++...+..   .|.+++.++++  .++.+|+++|++.++++++++
T Consensus        87 ~g~t~al~~~~~~l~~~~~~~g-d~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~v  163 (400)
T 3vax_A           87 SGATESNNIALLGLAPYGERTG-RRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPG--PSGRISVEGVMERLRPDTLLV  163 (400)
T ss_dssp             SCHHHHHHHHHHTTHHHHHHHT-CCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCC--TTCCCCHHHHHTTCCTTEEEE
T ss_pred             CCHHHHHHHHHHHHHHhhccCC-CCEEEECccccHhHHHHHHHHHhcCCeEEEEccC--CCCCcCHHHHHHhcCCCceEE
Confidence            999999999999998    899 9 999999999987655444   69999999875  356789999999999999999


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547          189 VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL  268 (311)
Q Consensus       189 ~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i  268 (311)
                      ++++|+||||.+++   +++|.++|+++|++||+|++|+...    ....+..+    ..+++.|+||.++.+|  +|++
T Consensus       164 ~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~----~~~~~~~~----~d~~~~s~~K~~g~~g--~g~~  230 (400)
T 3vax_A          164 SLMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK----VPGDLTTP----IDMISISGHKIGAPKG--VGAL  230 (400)
T ss_dssp             ECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT----SGGGGGSC----CSEEEEETGGGTSCSS--CEEE
T ss_pred             EEECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC----CCcChhhc----CcEEEEeHHHhCCCCc--eEEE
Confidence            99999999999999   8999999999999999999998522    11222222    3389999999876555  6666


Q ss_pred             E-eeC
Q 021547          269 A-TND  272 (311)
Q Consensus       269 ~-~~~  272 (311)
                      + +++
T Consensus       231 ~~~~~  235 (400)
T 3vax_A          231 VTRRR  235 (400)
T ss_dssp             EECBC
T ss_pred             EEecc
Confidence            6 665

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.91  E-value=4.4e-23  Score=187.41  Aligned_cols=204  Identities=14%  Similarity=0.110  Sum_probs=163.5

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      +.++++|+.+.|.      ..+ +.+++.+.+...   .|.+..+..++|+++++++..        +++++++|+++++
T Consensus         5 ~~~~~~l~~~~~~------~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~~~~~~gt~a~   66 (374)
T 3uwc_A            5 RVPYSYLERQFAD------IEP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHNA--------PHAIGVGTGTDAL   66 (374)
T ss_dssp             CBCSCCHHHHTSS------CHH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTTC--------SEEEEESCHHHHH
T ss_pred             cceeeccccCCCC------chH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhCC--------CcEEEeCCHHHHH
Confidence            3567888888854      234 888888877654   466777899999999999942        3789999999999


Q ss_pred             HHHHHHH-hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          124 EIILTVI-TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       124 ~~~~~~l-~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      ..++.++ .++| |+|+++.|+|..+...++..|.+++.++..  .++.+|++.+++.+++++++++   |+||||...+
T Consensus        67 ~~~~~~~~~~~g-d~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~  140 (374)
T 3uwc_A           67 AMSFKMLNIGAG-DEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD  140 (374)
T ss_dssp             HHHHHHTTCCTT-CEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC
T ss_pred             HHHHHHcCCCCC-CEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC
Confidence            9999999 8999 999999999999999999999999999875  5678999999999988887776   8899999988


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCc-cCCCCCCcccccCCCCCeEEEecCc--ccCCCCcceeeEEEeeCCCCccch
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLA-FGSTPYIPMGVFGSIVPVITLGSIS--KRWIVPGWRFGWLATNDPNGVLQK  279 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~-~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~i~~~~~~~~~~~  279 (311)
                         +++|.++|+++|+++|+|++|.... +++.+...   +    ..+++.|+|  |.++.+|. .|+++++++      
T Consensus       141 ---~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~---~----~d~~~~s~~~~K~l~~~g~-~g~~~~~~~------  203 (374)
T 3uwc_A          141 ---MPALAKIAKKHNLHIVEDACQTILGRINDKFVGS---W----GQFACFSLHPLKNLNVWSD-AGVIITHSD------  203 (374)
T ss_dssp             ---HHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS---S----SSEEEEECSSSSSSCCSSC-CEEEEESCH------
T ss_pred             ---HHHHHHHHHHcCCEEEEeCCCccCceeCCeeccc---c----ccEEEEeCCCCCcCCccce-eEEEEeCCH------
Confidence               9999999999999999999998642 33222111   1    137788866  99876566 888887653      


Q ss_pred             hhHHHHHhhh
Q 021547          280 SGIVGSIKAC  289 (311)
Q Consensus       280 ~~~~~~~~~~  289 (311)
                       .+.++++..
T Consensus       204 -~~~~~~~~~  212 (374)
T 3uwc_A          204 -EYAEKLRLY  212 (374)
T ss_dssp             -HHHHHHHHH
T ss_pred             -HHHHHHHHH
Confidence             356666554

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.90  E-value=4.2e-23  Score=192.67  Aligned_cols=245  Identities=14%  Similarity=0.063  Sum_probs=168.3

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.++||+.|.+....+ ..+|.+.+++.+++.....   ....+..+.+..+++++.+.++.  ..+ |++|+|+++|
T Consensus        47 ~g~~~lD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~~--~~~-v~~~~ggseA  119 (452)
T 3n5m_A           47 QGKRYLDGMSGLWCVNSG-YGRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLGG--EYV-IFFSNSGSEA  119 (452)
T ss_dssp             TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHTS--CEE-EEEESSHHHH
T ss_pred             CCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCCC--Cce-EEEeCchHHH
Confidence            478899999883221112 3579999999999875322   22234456666666666665543  334 9999999999


Q ss_pred             HHHHHHHHh-----c---CCCCEEEecCCCCcchHHHHHHcCcE-------------EEEeeccCCCCcc-cC-------
Q 021547          123 VEIILTVIT-----R---LGAANILLPRPGWPFYESFAKRNHIE-------------VRHFDLLPERGWE-VD-------  173 (311)
Q Consensus       123 ~~~~~~~l~-----~---~g~d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~-~d-------  173 (311)
                      ++.+++.+.     .   ++ ++|++..|+|+++...+...+..             ...++......+. -|       
T Consensus       120 ~~~al~~~~~~~~~~g~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (452)
T 3n5m_A          120 NETAFKIARQYYAQKGEPHR-YKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDV  198 (452)
T ss_dssp             HHHHHHHHHHHHHTTTCTTC-CEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGC
T ss_pred             HHHHHHHHHHHHHhcCCCCC-CEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHH
Confidence            999999987     4   56 99999999999876555444321             2233221100000 01       


Q ss_pred             --HHHHHhhcC----CCccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCC
Q 021547          174 --LEAVEALAD----ENTAAIVIINP-CNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSI  245 (311)
Q Consensus       174 --~~~l~~~l~----~~~~~i~i~~p-~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~  245 (311)
                        ++.|++.++    ++++++++..+ +| +|.++ +++.+++|.++|++||+++|+||+|.++.+.|.. .....+...
T Consensus       199 ~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~-~~~~~~~~~  276 (452)
T 3n5m_A          199 ECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKA-FGFMNYDVK  276 (452)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCccccc-chhhhcCCC
Confidence              788988876    45666666666 79 99766 8888999999999999999999999987666542 223333322


Q ss_pred             CCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh------h-hccccCCCchhHHHHHhhhh
Q 021547          246 VPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA------C-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       246 ~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .++   .++||.++. | +|+||++++.        ++++.+..      + ...+++.++++|+++.+.|+
T Consensus       277 ~di---~t~sK~l~~-G~~~ig~~~~~~--------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~  336 (452)
T 3n5m_A          277 PDI---ITMAKGITS-AYLPLSATAVKR--------EIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLE  336 (452)
T ss_dssp             CSE---EEECGGGGT-TSSCCEEEEEEH--------HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHH
T ss_pred             CCE---EeecccccC-CCcceEEEEECH--------HHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHH
Confidence            233   378999876 9 9999999853        46776643      1 23467889999999888775

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.90  E-value=5.5e-23  Score=187.96  Aligned_cols=202  Identities=16%  Similarity=0.156  Sum_probs=160.8

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEI  125 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~  125 (311)
                      ++|+|+.  |.    +  ++.+.+++.+.+...   .|.+..+..++|+++++++.        .+++++|+|+++++.+
T Consensus         9 ~~i~~~~--p~----~--~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~   69 (393)
T 1mdo_A            9 DFLPFSR--PA----M--GAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHI   69 (393)
T ss_dssp             CCBCSCC--CC----C--CHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHH
T ss_pred             cccccCC--CC----C--CHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHH
Confidence            5788876  32    2  367789998888654   24455688999999999994        2479999999999999


Q ss_pred             HHHHH-hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547          126 ILTVI-TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ  204 (311)
Q Consensus       126 ~~~~l-~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~  204 (311)
                      ++.++ +++| |+|+++.|+|..+...++..|.+++.+++++ +++.+|++.+++.+++++++++++   ||+|...+  
T Consensus        70 ~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~--  142 (393)
T 1mdo_A           70 ALMALGIGEG-DEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPAD--  142 (393)
T ss_dssp             HHHHTTCCTT-CEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCC--
T ss_pred             HHHHcCCCCC-CEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEe---CCCCCcCC--
Confidence            99999 8999 9999999999999999999999999998753 456799999999998888888765   48999887  


Q ss_pred             HHHHHHHHHHHhCCEEEEeccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHH
Q 021547          205 HLQKIAETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIV  283 (311)
Q Consensus       205 ~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  283 (311)
                       +++|.++|+++|+++|+|++|+. +.+.+.+   +..     +.+++.|+||..+++|.|+||++++++       +++
T Consensus       143 -~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~~-----~d~~~~S~~k~K~l~~~~~g~~~~~~~-------~~~  206 (393)
T 1mdo_A          143 -LDAIYALGERYGIPVIEDAAHATGTSYKGRH---IGA-----RGTAIFSFHAIKNITCAEGGIVVTDNP-------QFA  206 (393)
T ss_dssp             -HHHHHHHHHHHTCCBCEECTTCTTCEETTEE---TTS-----SSEEEEECCTTSSSCSSSCEEEEESCH-------HHH
T ss_pred             -HHHHHHHHHHcCCeEEEECccccCCeECCee---cCC-----CCeEEEeCCCCCccccccceEEEeCCH-------HHH
Confidence             99999999999999999999995 4444321   111     458999999444455669999998643       366


Q ss_pred             HHHhhh
Q 021547          284 GSIKAC  289 (311)
Q Consensus       284 ~~~~~~  289 (311)
                      ++++..
T Consensus       207 ~~l~~~  212 (393)
T 1mdo_A          207 DKLRSL  212 (393)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            666654

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.90  E-value=8.5e-23  Score=186.86  Aligned_cols=209  Identities=18%  Similarity=0.204  Sum_probs=157.5

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      +-+++++++.+.|.      .++.+.+++.+.+..+   .|. +..+..++|+++++++..        +++++++|+++
T Consensus        20 ~~~~~~~l~~~~p~------~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~~--------~~~i~~~~gt~   82 (391)
T 3dr4_A           20 HMSDLPRISVAAPR------LDGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCGV--------KHAIACNNGTT   82 (391)
T ss_dssp             --------CCCCCC------CCSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHTC--------SEEEEESSHHH
T ss_pred             hcCCCceeccCCCC------CCHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhCC--------CcEEEeCCHHH
Confidence            34678999999864      2367888888887654   355 567889999999999942        37889999999


Q ss_pred             HHHHHHHHH-hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC
Q 021547          122 AVEIILTVI-TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNV  200 (311)
Q Consensus       122 a~~~~~~~l-~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~  200 (311)
                      ++.+++.++ +++| |+|+++.|+|..+...++..|.+++.+++++ +++.+|++.+++.+++++++++   ++||||..
T Consensus        83 al~~~l~~~~~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~  157 (391)
T 3dr4_A           83 ALHLALVAMGIGPG-DEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQI  157 (391)
T ss_dssp             HHHHHHHHHTCCTT-CEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCC
T ss_pred             HHHHHHHHcCCCCc-CEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCCh
Confidence            999999999 8899 9999999999999999999999999998754 4578999999999988888777   56899999


Q ss_pred             CCHHHHHHHHHHHHHhCCEEEEeccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccch
Q 021547          201 LTYQHLQKIAETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK  279 (311)
Q Consensus       201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~  279 (311)
                      .+   +++|.++|+++|+++|+|++|+. ..+.+.+.   ..+.    .+.+.||||..+++|.+.|+++++++      
T Consensus       158 ~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~---~~~~----di~~~S~s~~K~l~~g~gg~~~~~~~------  221 (391)
T 3dr4_A          158 CD---MDPILEVARRHNLLVIEDAAEAVGATYRGKKS---GSLG----DCATFSFFGNAIITTGEGGMITTNDD------  221 (391)
T ss_dssp             CC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEET---TSSS----SEEEEECBTTSSSCCBSCEEEEESCH------
T ss_pred             hh---HHHHHHHHHHcCCEEEEECcccccceECCeee---cccC----CEEEEECCCCCcCCcCCeEEEEECCH------
Confidence            88   89999999999999999999985 33333211   1111    17777877333345567899888653      


Q ss_pred             hhHHHHHhhhh
Q 021547          280 SGIVGSIKACL  290 (311)
Q Consensus       280 ~~~~~~~~~~~  290 (311)
                       .+.++++...
T Consensus       222 -~~~~~~~~~~  231 (391)
T 3dr4_A          222 -DLAAKMRLLR  231 (391)
T ss_dssp             -HHHHHHHHHH
T ss_pred             -HHHHHHHHHH
Confidence             3666665543

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.90  E-value=4.1e-23  Score=184.73  Aligned_cols=184  Identities=16%  Similarity=0.093  Sum_probs=147.4

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEeeccC
Q 021547           91 LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHFDLLP  166 (311)
Q Consensus        91 ~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~  166 (311)
                      +++++++++++.      +  +.++++++++++..++.++.++| |+|+++.|+|.++...+    +..|.+++.++.  
T Consensus         2 ~l~~~la~~~g~------~--~~i~~~sG~~a~~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--   70 (331)
T 1pff_A            2 ALEGKIAKLEHA------E--ACAATASGMGAIAASVWTFLKAG-DHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM--   70 (331)
T ss_dssp             HHHHHHHHHHTC------S--EEEEESSHHHHHHHHHHHHCCTT-CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT--
T ss_pred             hHHHHHHHHhCC------C--eEEEeCChHHHHHHHHHHhcCCC-CEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC--
Confidence            689999999842      2  44555555899999999999999 99999999999876654    558999988875  


Q ss_pred             CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH-hCCEEEEeccccCCccCCCCCCcccccCCC
Q 021547          167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK-LGILVIADEVYGHLAFGSTPYIPMGVFGSI  245 (311)
Q Consensus       167 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~-~~~~li~D~ay~~~~~~~~~~~~~~~~~~~  245 (311)
                           .|++.+++.++++++++++++|+||||..++   +++|.++|++ +|+++|+|++|....+.    .++ .   .
T Consensus        71 -----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~----~~~-~---~  134 (331)
T 1pff_A           71 -----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPL-D---L  134 (331)
T ss_dssp             -----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGG-G---G
T ss_pred             -----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC----Chh-h---c
Confidence                 3788999999989999999999999999998   9999999999 99999999999865432    122 1   2


Q ss_pred             CCeEEEecCcccCCCCcce-eeEEEeeCCCCccchhhHHHHHhhhhcc--ccCCCchhHHHHHhhh
Q 021547          246 VPVITLGSISKRWIVPGWR-FGWLATNDPNGVLQKSGIVGSIKACLGV--RSGPSTLIQVCEMFLL  308 (311)
Q Consensus       246 ~~~i~i~s~sK~~~~~G~r-~G~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l  308 (311)
                      ++++++.|+||.|+++|.| +||++++++       ++++.++.....  +...+++.|+++.+.+
T Consensus       135 ~~d~~~~s~~K~~~~~~~r~~G~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l  193 (331)
T 1pff_A          135 GVDIVVHSATKYINGHTDVVAGLVCSRAD-------IIAKVKSQGIKDITGAIISPHDAWLITRGT  193 (331)
T ss_dssp             TCSEEEEETTTTTSSSSSCCCEEEEECHH-------HHHHHHHTCCCCCCCCCCCHHHHHHHHHHH
T ss_pred             CCcEEEEECccccCCCCCceEEEEEeCcH-------HHHHHHHHHHHhhcCCCCCHHHHHHHHcCc
Confidence            3569999999999999999 799988541       377777776443  4567888887755444

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.90  E-value=1e-23  Score=191.80  Aligned_cols=191  Identities=16%  Similarity=0.072  Sum_probs=145.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL  140 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~  140 (311)
                      .++++.+.+++.+.+...  ..+.......++++.+++++.    .+...+++++|+|+++++. ++..++++| |+|++
T Consensus        11 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~la~~~~----~~~~~~~v~~~~g~t~al~-~~~~~~~~g-d~vi~   82 (384)
T 3zrp_A           11 TTIKEDVLVAGLENNVGF--TSKEFVEALAYSLKGLRYVMG----ASKNYQPLIIPGGGTSAME-SVTSLLKPN-DKILV   82 (384)
T ss_dssp             SCCCHHHHHHTTCCSCCT--TSHHHHHHHHHHHHHHHHHHT----CCTTSEEEEEESCHHHHHH-HGGGGCCTT-CEEEE
T ss_pred             CCCCHHHHHHhhcccccc--ccHHHHHHHHHHHHHHHHHhC----CCCCCcEEEEcCCcHHHHH-HHHhhcCCC-CEEEE
Confidence            467888888877654321  011112345566777777773    2222378999999999999 999999999 99999


Q ss_pred             cCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC
Q 021547          141 PRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG  217 (311)
Q Consensus       141 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~  217 (311)
                      +.|+|.+  +...++..|.+++.++++.  ++.+|++++++.+++ +++++++++|+||||.+++   +++|.++|++||
T Consensus        83 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~  157 (384)
T 3zrp_A           83 VSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKYV  157 (384)
T ss_dssp             ECSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGGE
T ss_pred             ecCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhcC
Confidence            9999965  6667788999999998753  457899999999877 8999999999999999999   889999999999


Q ss_pred             CEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          218 ILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       218 ~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      +++|+|++|+....    ...+.   ..+..+++.|+||+++. +.++||+++++
T Consensus       158 ~~li~D~a~~~~~~----~~~~~---~~~~d~~~~s~~K~~~~-~~g~g~~~~~~  204 (384)
T 3zrp_A          158 ELIVVDGVSSVGAE----EVKAE---EWNVDVYLTASQKALGS-AAGLGLLLLSP  204 (384)
T ss_dssp             EEEEEECTTTTTTS----CCCTT---TTTCSEEEEETTSTTCC-CSSEEEEEECH
T ss_pred             CEEEEECcccccCc----ccccc---ccCCCEEEecCcccccC-CCceEEEEECH
Confidence            99999999985321    11222   22345999999998743 24489999854

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.90  E-value=1.5e-22  Score=191.19  Aligned_cols=206  Identities=14%  Similarity=0.077  Sum_probs=165.2

Q ss_pred             CCCcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-----
Q 021547           61 FRTAAVAEDAIVDSVRSS---MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR-----  132 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~-----  132 (311)
                      +..++.+.+++.+.+...   ....|...+|..++++.+++++.+.+|.+...+++++|+|+++++.+++.++++     
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~  153 (497)
T 3mc6_A           74 YHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHH  153 (497)
T ss_dssp             SCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhc
Confidence            345578888888877642   222466666788999999999999888776788999999999999999999864     


Q ss_pred             CC--CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHH
Q 021547          133 LG--AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIA  210 (311)
Q Consensus       133 ~g--~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~  210 (311)
                      +|  .|+|+++.++|..+...++..|++++.++++. +++.+|++.|+++++++++++++++|+||||.+.+   +++|.
T Consensus       154 ~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~  229 (497)
T 3mc6_A          154 RGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLG  229 (497)
T ss_dssp             SCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTT
T ss_pred             CCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHH
Confidence            23  27999999999999999999999999998754 46789999999999999999999999999999988   88999


Q ss_pred             HHHHHhCCEEEEeccccCCccC-----CCCCC-cccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          211 ETARKLGILVIADEVYGHLAFG-----STPYI-PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       211 ~l~~~~~~~li~D~ay~~~~~~-----~~~~~-~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      ++|+++|+++|+|++|+.+...     +.... ++ .+...+..+++.|++|. +..|.++||+++++
T Consensus       230 ~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~-~~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~  295 (497)
T 3mc6_A          230 KIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLL-DFRVPGVTSISCDTHKY-GFAPKGSSVIMYRN  295 (497)
T ss_dssp             THHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCC-STTSTTCCEEEEETTTT-TCCCSSCEEEECSS
T ss_pred             HHHHHhCCEEEEECcchhhhhhhhhhhcccCCccc-cccCCCCcEEEECchhh-cCCCCCceeEEecC
Confidence            9999999999999999854321     11111 11 11222335888899997 56788999999865

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.90  E-value=4.4e-23  Score=189.91  Aligned_cols=188  Identities=18%  Similarity=0.174  Sum_probs=149.6

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~  162 (311)
                      ++..++|++++++++.      . +.|++++| ++++..++. ++++| |+|+++.|.|.+....    ++..|++++.+
T Consensus        67 p~~~~l~~~la~~~g~------~-~~i~~~sG-~~ai~~~~~-l~~~g-d~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v  136 (403)
T 3cog_A           67 PTRNCLEKAVAALDGA------K-YCLAFASG-LAATVTITH-LLKAG-DQIICMDDVYGGTNRYFRQVASEFGLKISFV  136 (403)
T ss_dssp             HHHHHHHHHHHHHHTC------S-EEEEESCH-HHHHHHHHT-TSCTT-CEEEEESSCCHHHHHHHHHTGGGGTCEEEEE
T ss_pred             chHHHHHHHHHHHhCC------C-cEEEECCH-HHHHHHHHH-HhCCC-CEEEEeCCCcchHHHHHHHHHHHcCCEEEEE
Confidence            4678999999999943      2 45565555 689999999 88999 9999999999874443    45789999988


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC-CEEEEeccccCCccCCCCCCcccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG-ILVIADEVYGHLAFGSTPYIPMGV  241 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~-~~li~D~ay~~~~~~~~~~~~~~~  241 (311)
                      +..       |++.+++.++++++++++++|+||||.+++   +++|+++|+++| +++|+|++|....+. .   ++. 
T Consensus       137 ~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~-~---~~~-  201 (403)
T 3cog_A          137 DCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ-R---PLA-  201 (403)
T ss_dssp             CTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC-C---TTT-
T ss_pred             CCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC-C---ccc-
Confidence            753       889999999999999999999999999998   999999999999 999999999986542 1   221 


Q ss_pred             cCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          242 FGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       242 ~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                         .+..|+++|+||.++.+| .|+||++++++       +++++++.... .+...+++.|+++.+.++
T Consensus       202 ---~~~div~~S~sK~~~g~~~~~~G~v~~~~~-------~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~  261 (403)
T 3cog_A          202 ---LGADISMYSATKYMNGHSDVVMGLVSVNCE-------SLHNRLRFLQNSLGAVPSPIDCYLCNRGLK  261 (403)
T ss_dssp             ---TTCSEEEEETTTTTTCSSCCCCEEEEECCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred             ---cCCeEEEEcChhhccCCCCCeEEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence               235599999999999877 47999998543       36777766533 345678888888766554

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.90  E-value=1.9e-23  Score=193.91  Aligned_cols=243  Identities=15%  Similarity=0.078  Sum_probs=161.6

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.++||..+......+ ..+|.+.+++.+++.......|+ .....++++++++++    +   ..++|++|+|++++
T Consensus        53 ~g~~ylD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~l~~~la~~~----~---~~~~v~~~~sGsea  123 (434)
T 3l44_A           53 DGNKYIDYLAAYGPIITG-HAHPHITKAITTAAENGVLYGTP-TALEVKFAKMLKEAM----P---ALDKVRFVNSGTEA  123 (434)
T ss_dssp             TCCEEEECCGGGTTCSSC-BTCHHHHHHHHHHHHHCSCCSSC-CHHHHHHHHHHHHHC----T---TCSEEEEESSHHHH
T ss_pred             CCCEEEECCCchhccccC-CCCHHHHHHHHHHHHhCcCCCCC-CHHHHHHHHHHHHhC----C---CCCEEEEeCchHHH
Confidence            478899998875322212 26899999999988764333343 334556666666665    2   46899999999999


Q ss_pred             HHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCc-EEEEeeccCCCCc--------c----cCHHHHHhhcCC--Cc
Q 021547          123 VEIILTVITR--LGAANILLPRPGWPFYESFAKRNHI-EVRHFDLLPERGW--------E----VDLEAVEALADE--NT  185 (311)
Q Consensus       123 ~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~--------~----~d~~~l~~~l~~--~~  185 (311)
                      ++.++..+..  ++ ++|++..|+|.++...+...+. ...........+.        .    -|++.|++.+++  ..
T Consensus       124 ~~~ai~~a~~~~~~-~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~  202 (434)
T 3l44_A          124 VMTTIRVARAYTGR-TKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHE  202 (434)
T ss_dssp             HHHHHHHHHHHHCC-CEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHhhCC-CEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCC
Confidence            9999988765  56 8999999999876543332221 1111110000000        0    178899988763  23


Q ss_pred             cEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547          186 AAIVIINP-CNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW  263 (311)
Q Consensus       186 ~~i~i~~p-~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~  263 (311)
                      .++++++| +|++|.+. +++.+++|.++|++||++||+||+|.++ ..|.. .....+....+   +.++||.++ +|+
T Consensus       203 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK~~~-~G~  276 (434)
T 3l44_A          203 VAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYG-GAQDLLGVTPD---LTALGKVIG-GGL  276 (434)
T ss_dssp             EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSS-CHHHHHTCCCS---EEEEEGGGG-TTS
T ss_pred             EEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ecccc-HHHHHcCCCCC---eeehhhhhc-CCc
Confidence            44455555 55666655 8888999999999999999999999987 54432 22222222222   448999987 799


Q ss_pred             eeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547          264 RFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       264 r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |+||++++.        ++++.+...    ...++++++++|+++.+.|+
T Consensus       277 ~iG~~~~~~--------~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~  318 (434)
T 3l44_A          277 PIGAYGGKK--------EIMEQVAPLGPAYQAGTMAGNPASMASGIACLE  318 (434)
T ss_dssp             SCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred             CeeeEEEcH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHH
Confidence            999998743        466666552    33467889999998887765

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.90  E-value=1.2e-22  Score=187.49  Aligned_cols=185  Identities=16%  Similarity=0.094  Sum_probs=142.2

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH----HcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK----RNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~----~~g~~~~~~~  163 (311)
                      ...++++.+++++    |    .+++++++|+++|+.+++.+++++| |+|+++.|+|.++...++    ..|.+++.++
T Consensus        82 ~~~~l~~~la~~~----g----~~~~~~~~sG~~Ai~~al~~l~~~G-d~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~  152 (414)
T 3ndn_A           82 TVSVFEERLRLIE----G----APAAFATASGMAAVFTSLGALLGAG-DRLVAARSLFGSCFVVCSEILPRWGVQTVFVD  152 (414)
T ss_dssp             HHHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHTTCCTT-CEEEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHHHHH----C----CCcEEEECCHHHHHHHHHHHHhCCC-CEEEEcCCccchHHHHHHHHHHHcCcEEEEeC
Confidence            3455666666665    2    3578999999999999999999999 999999999998776664    4999999987


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      ..       |++.++++++++++++++++|+||||.+.+   +++|.++|+++|+++|+|++|....+.    .++ .  
T Consensus       153 ~~-------d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~-~--  215 (414)
T 3ndn_A          153 GD-------DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ----QGF-P--  215 (414)
T ss_dssp             TT-------CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CCG-G--
T ss_pred             CC-------CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-h--
Confidence            63       889999999999999999999999999988   899999999999999999999853221    111 1  


Q ss_pred             CCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHH-HHhhh-hccccCCCchhHHHHHhh
Q 021547          244 SIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVG-SIKAC-LGVRSGPSTLIQVCEMFL  307 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~q~~~~~~  307 (311)
                       .+..+++.|+||.++.+| +++|++++++.        .+. .++.. .......+++..+++.+.
T Consensus       216 -~g~div~~S~sK~l~~~G~~~~G~vv~~~~--------~~~~~l~~~~~~~g~~~~~~~a~~~~~~  273 (414)
T 3ndn_A          216 -LGVDVVVYSGTKHIDGQGRVLGGAILGDRE--------YIDGPVQKLMRHTGPAMSAFNAWVLLKG  273 (414)
T ss_dssp             -GTCSEEEEETTTTTTCSSCCCCEEEEECHH--------HHTTHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred             -cCCCeEeccCCccccCCCCceEEEEEECHH--------HHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence             123489999999999989 89999988542        333 44433 222334566655554443

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.90  E-value=8.9e-24  Score=189.89  Aligned_cols=188  Identities=16%  Similarity=0.099  Sum_probs=144.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEE
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANIL  139 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl  139 (311)
                      .++++.+.+++.+.+..   +.|. ...+..++|++++++++    .+.+++++++|+|+++++..++.++.+   |+|+
T Consensus         9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~t~g~t~a~~~~~~~~~~---d~vl   78 (353)
T 2yrr_A            9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFD----PGEGALVAALAGSGSLGMEAGLANLDR---GPVL   78 (353)
T ss_dssp             CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHC----CCTTCEEEEESSCHHHHHHHHHHTCSC---CCEE
T ss_pred             CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhC----CCCCCceEEEcCCcHHHHHHHHHHhcC---CcEE
Confidence            56788999888776643   1232 12346778888888873    233467899999999999999999875   6899


Q ss_pred             ecCCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh
Q 021547          140 LPRPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKL  216 (311)
Q Consensus       140 ~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~  216 (311)
                      ++.+.|+++  ...++..|.+++.++.+  .++.+|++.+++.+++ +++++++++|+||||..++   +++|.++|+++
T Consensus        79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~  153 (353)
T 2yrr_A           79 VLVNGAFSQRVAEMAALHGLDPEVLDFP--PGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEA  153 (353)
T ss_dssp             EEECSHHHHHHHHHHHHTTCCEEEEECC--TTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHH
T ss_pred             EEcCCCchHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHc
Confidence            999999875  45668899999999875  3457899999998877 8999999999999999999   88999999999


Q ss_pred             CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC-CCCcceeeEEEeeC
Q 021547          217 GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW-IVPGWRFGWLATND  272 (311)
Q Consensus       217 ~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~  272 (311)
                      |+++|+|++|+...    ....+..++   ..+++.|++|++ +.+|  +||+++++
T Consensus       154 ~~~li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~~~~~g--~G~~~~~~  201 (353)
T 2yrr_A          154 GALFFLDAVTTLGM----LPFSMRAMG---VDYAFTGSQKCLSAPPG--LAPIAASL  201 (353)
T ss_dssp             TCEEEEECTTTTTT----SCCCHHHHT---CSEEECCTTSTTCCCSS--CEEEEECH
T ss_pred             CCeEEEEcCccccc----ccccccccC---ceEEEecCcccccCCCc--eEEEEECH
Confidence            99999999996421    112232222   248889999964 4456  79999864

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.90  E-value=4.6e-23  Score=189.40  Aligned_cols=207  Identities=14%  Similarity=0.104  Sum_probs=153.7

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCC-EEEeCChH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADD-IYITLGCM  120 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~-v~~t~g~~  120 (311)
                      .+..+.|+-|.      .++++.+.+++.+.+    ...|.+  .....++++.++++++      ...++ +++|+|++
T Consensus        11 ~~~~~~~~pgp------~~~~~~v~~a~~~~~----~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~sgt   74 (411)
T 3nnk_A           11 PPSRLLMGPGP------INADPRVLRAMSSQL----IGQYDPAMTHYMNEVMALYRGVFR------TENRWTMLVDGTSR   74 (411)
T ss_dssp             CCCCEEESSSC------CCCCHHHHHHHTSCC----CCTTCHHHHHHHHHHHHHHHHHHT------CCCSEEEEEESCHH
T ss_pred             CccceeecCCC------CCCCHHHHHHhhccc----cccccHHHHHHHHHHHHHHHHHhC------CCCCcEEEECCCcH
Confidence            44555565443      466788888876443    212322  1123456666666663      23444 78899999


Q ss_pred             HHHHHHHHHHhcCCCCEEEecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCC
Q 021547          121 EAVEIILTVITRLGAANILLPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPC  197 (311)
Q Consensus       121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~npt  197 (311)
                      +++.+++.+++++| |+|+++.|+|.+  +...++..|.+++.++..  .++.+|+++|++.+++ +++++++++|+|||
T Consensus        75 ~al~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~npt  151 (411)
T 3nnk_A           75 AGIEAILVSAIRPG-DKVLVPVFGRFGHLLCEIARRCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTST  151 (411)
T ss_dssp             HHHHHHHHHHCCTT-CEEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTT
T ss_pred             HHHHHHHHHhcCCC-CEEEEecCCchHHHHHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCc
Confidence            99999999999999 999999999977  888999999999999873  4567899999999876 89999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCcc
Q 021547          198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVL  277 (311)
Q Consensus       198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~  277 (311)
                      |.+++   +++|.++|++||+++|+|++|+...    ....+.   ..+..+++.|+||+++. +.++||+++++     
T Consensus       152 G~~~~---l~~i~~l~~~~~~~li~Dea~~~~~----~~~~~~---~~~~d~~~~s~~K~l~~-~~g~g~~~~~~-----  215 (411)
T 3nnk_A          152 TMLQP---LAELGEICRRYDALFYTDATASLGG----NPLETD---VWGLDAVSAGMQKCLGG-PSGTSPITLSA-----  215 (411)
T ss_dssp             TEECC---CTTHHHHHHHHTCEEEEECTTTBTT----BCCCTT---TTTCSEEECCSTTTTCC-CSSEEEEEECH-----
T ss_pred             ceecc---HHHHHHHHHHcCCEEEEECCcccCC----cccchh---ccCCcEEEecCccccCC-CCceEEEEECH-----
Confidence            99999   8899999999999999999987522    111221   22345999999997433 34689998853     


Q ss_pred             chhhHHHHHhh
Q 021547          278 QKSGIVGSIKA  288 (311)
Q Consensus       278 ~~~~~~~~~~~  288 (311)
                         +++++++.
T Consensus       216 ---~~~~~~~~  223 (411)
T 3nnk_A          216 ---RMEEAIRR  223 (411)
T ss_dssp             ---HHHHHHHT
T ss_pred             ---HHHHHHhh
Confidence               36666654

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.90  E-value=1.2e-22  Score=185.68  Aligned_cols=189  Identities=21%  Similarity=0.241  Sum_probs=150.0

Q ss_pred             CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEE
Q 021547           86 MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRH  161 (311)
Q Consensus        86 ~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~  161 (311)
                      ..+..++++++++++..      . +.+++++| ++++..++.++.++| |+|+++.|+|.+...    .++..|.+++.
T Consensus        51 ~~~~~~l~~~la~~~~~------~-~~i~~~sG-t~a~~~~~~~~~~~g-~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~  121 (386)
T 1cs1_A           51 NPTRDVVQRALAELEGG------A-GAVLTNTG-MSAIHLVTTVFLKPG-DLLVAPHDCYGGSYRLFDSLAKRGCYRVLF  121 (386)
T ss_dssp             CHHHHHHHHHHHHHHTC------S-EEEEESSH-HHHHHHHHHHHCCTT-CEEEEETTCCHHHHHHHHHHHTTTSCEEEE
T ss_pred             CccHHHHHHHHHHHhCC------C-cEEEeCCH-HHHHHHHHHHHhCCC-CEEEEecCCcHhHHHHHHHHHHhcCCEEEE
Confidence            35678999999999943      2 55666555 999999999999999 999999999987443    34677889888


Q ss_pred             eeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc
Q 021547          162 FDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV  241 (311)
Q Consensus       162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~  241 (311)
                      ++..       |++.+++.++++++++++++|+||||.+++   +++|.++|+++|+++|+|++|..+.+.    .++ .
T Consensus       122 ~~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~----~~~-~  186 (386)
T 1cs1_A          122 VDQG-------DEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQ----NPL-A  186 (386)
T ss_dssp             ECTT-------CHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CGG-G
T ss_pred             eCCC-------CHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc-c
Confidence            8752       889999998889999999999999999998   999999999999999999999986543    122 1


Q ss_pred             cCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547          242 FGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       242 ~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  308 (311)
                         .++.+++.|+||.++.+|.|+ ||++++++       ++++.++.... .+...++++++++.+.+
T Consensus       187 ---~~~di~~~s~sK~~~~~~~~~~G~~~~~~~-------~l~~~l~~~~~~~~~~~~~~~~~~~~~~l  245 (386)
T 1cs1_A          187 ---LGADLVLHSCTKYLNGHSDVVAGVVIAKDP-------DVVTELAWWANNIGVTGGAFDSYLLLRGL  245 (386)
T ss_dssp             ---GTCSEEEEETTTTTTCSSCCCCEEEEESSH-------HHHHHHHHHHHHHTCBCCHHHHHHHHHHH
T ss_pred             ---cCceEEEEcCcccccCCCCceeEEEEeCcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Confidence               235699999999999999997 99998642       36677766533 23457788777765544

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.90  E-value=1.2e-22  Score=184.62  Aligned_cols=209  Identities=11%  Similarity=0.102  Sum_probs=154.5

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE  124 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~  124 (311)
                      ....+|+.|.      .++++.+.+++.+.+..    .|.+  +..++.+.+.+++.+.+|.+.+.+.+++|+|+++++.
T Consensus        18 ~~~~~~~pgp------~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~   85 (376)
T 3f0h_A           18 QGMLNFTVGP------VMSSEEVRAIGAEQVPY----FRTT--EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSME   85 (376)
T ss_dssp             SSCEECSSSS------CCCCHHHHHHHTSCCCC----CSSH--HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHH
T ss_pred             cCceeecCCC------CCCcHHHHHHhcCCCCC----CCCH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHH
Confidence            4556676664      46788888888765421    2322  3445666666666665565433345566999999999


Q ss_pred             HHHHHHhcCCCCEEEecCCCCcchH--HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          125 IILTVITRLGAANILLPRPGWPFYE--SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       125 ~~~~~l~~~g~d~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +++.+++++| |+|+++.|.|.+..  ..+...|.+++.++..  .++.+|++++++.++++++++++++|+||||.+++
T Consensus        86 ~~~~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~  162 (376)
T 3f0h_A           86 AVVMNCFTKK-DKVLVIDGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD  162 (376)
T ss_dssp             HHHHHHCCTT-CCEEEEESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC
T ss_pred             HHHHhccCCC-CeEEEEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHhhccCceEEEEecccCCcceecC
Confidence            9999999999 99999998776643  4577789999988864  45679999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCC-CCcceeeEEEeeCCCCccchhh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI-VPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                         +++|.++|++||+++|+|++|+....   + ..+...   +..+++.|+||.++ .+|  +|++++++        +
T Consensus       163 ---l~~i~~l~~~~~~~li~D~~~~~~~~---~-~~~~~~---~~d~~~~s~~K~l~~~~G--~g~~~~~~--------~  222 (376)
T 3f0h_A          163 ---TMMIGEFCKKNNMFFVCDCVSAFLAD---P-FNMNEC---GADVMITGSQKVLACPPG--ISVIVLAP--------R  222 (376)
T ss_dssp             ---HHHHHHHHHHTTCEEEEECTTTTTTS---C-CCHHHH---TCSEEEEETTTTTCCCSS--CEEEEECH--------H
T ss_pred             ---HHHHHHHHHHcCCEEEEEcCccccCc---c-cccccc---CccEEEecCcccccCCCc--eEEEEECH--------H
Confidence               99999999999999999999986432   1 112211   23489999999987 566  56776643        3


Q ss_pred             HHHHHhh
Q 021547          282 IVGSIKA  288 (311)
Q Consensus       282 ~~~~~~~  288 (311)
                      +++++..
T Consensus       223 ~~~~~~~  229 (376)
T 3f0h_A          223 GVERVEK  229 (376)
T ss_dssp             HHHHHHT
T ss_pred             HHHHhhc
Confidence            5666553

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.90  E-value=9.8e-23  Score=190.72  Aligned_cols=215  Identities=16%  Similarity=0.127  Sum_probs=154.4

Q ss_pred             CCCeeecCCCCC--CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           44 PRPVIPLGHGDP--AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        44 ~~~~i~~~~g~p--~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      +.++++|+.|.+  ++.+.++. +.+.+++.+.+..+.. .|.++.+..++|+++++++.        .+++++|+|+++
T Consensus        33 g~~~~~~~~g~~ylD~~~~~~~-~~v~~a~~~~~~~~~~-~y~~~~~~~~l~~~la~~~~--------~~~v~~t~ggt~  102 (467)
T 1ax4_A           33 GYNPFLLPSSAVYIDLLTDSGT-NAMSDHQWAAMITGDE-AYAGSRNYYDLKDKAKELFN--------YDYIIPAHQGRG  102 (467)
T ss_dssp             TSCGGGSCGGGCSEECSCSSSC-CCEEHHHHHHHHTCCC-CSSSCHHHHHHHHHHHHHHC--------CCEEEEESSHHH
T ss_pred             CcCcccCCCCceeeecccCcCC-HHHHHHHHHHHhhccc-ccccCccHHHHHHHHHHHcC--------CCcEEEcCCcHH
Confidence            445555555533  11112222 5666777766654433 68777788999999999993        368999999999


Q ss_pred             HHHHHHHHHhc----CCCCE---EEecCCCCcchHHHHHHcCcEEEEeeccC---C-----CCcccCHHHHHhhcCC---
Q 021547          122 AVEIILTVITR----LGAAN---ILLPRPGWPFYESFAKRNHIEVRHFDLLP---E-----RGWEVDLEAVEALADE---  183 (311)
Q Consensus       122 a~~~~~~~l~~----~g~d~---Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~---~-----~~~~~d~~~l~~~l~~---  183 (311)
                      |+.+++.+++.    +| |+   |+++.+.|..+...+...|.+++.++...   .     .++.+|++.|++.+++   
T Consensus       103 A~~~al~~~~~~~~~~G-d~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~  181 (467)
T 1ax4_A          103 AENILFPVLLKYKQKEG-KAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGA  181 (467)
T ss_dssp             HHHHHHHHHHHHHHHTT-CCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHHhhccCC-CccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCC
Confidence            99999999988    99 98   99887777777888888999888775431   1     1346899999998863   


Q ss_pred             -CccEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHhCCEEEEeccccC--C--------ccCCCCCCccc-ccCCCCCeEE
Q 021547          184 -NTAAIVIINPCNPC-GNVLTYQHLQKIAETARKLGILVIADEVYGH--L--------AFGSTPYIPMG-VFGSIVPVIT  250 (311)
Q Consensus       184 -~~~~i~i~~p~npt-G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~--~--------~~~~~~~~~~~-~~~~~~~~i~  250 (311)
                       +++++++++|+||+ |.+++.+++++|.++|++||++||+|+++..  .        .+.+.+...+. ......+ ++
T Consensus       182 ~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~  260 (467)
T 1ax4_A          182 DNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD-AL  260 (467)
T ss_dssp             GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS-EE
T ss_pred             CCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccc-eE
Confidence             68899999999999 8999999999999999999999999998653  1        23332211111 0000111 56


Q ss_pred             EecCcccCCCC-cceeeEEEeeCC
Q 021547          251 LGSISKRWIVP-GWRFGWLATNDP  273 (311)
Q Consensus       251 i~s~sK~~~~~-G~r~G~i~~~~~  273 (311)
                      +.|+||.++++ |   ||++.+++
T Consensus       261 ~~s~sK~~g~~~G---g~~~~~d~  281 (467)
T 1ax4_A          261 TMSAKKDPLLNIG---GLVAIRDN  281 (467)
T ss_dssp             EEETTSTTCCSSC---EEEEESSC
T ss_pred             EEeccccCCCCcc---eEEEeCCH
Confidence            68999998766 4   66666533

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.90  E-value=5.3e-23  Score=192.48  Aligned_cols=250  Identities=13%  Similarity=0.037  Sum_probs=172.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.++||+.|.+....+ ..+|.+.+++.+++..... .|....+..+.++++++++.+.++  ...++|++|+|+++|
T Consensus        48 ~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggseA  123 (459)
T 4a6r_A           48 EGNKIIDGMAGLWCVNVG-YGRKDFAEAARRQMEELPF-YNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSES  123 (459)
T ss_dssp             TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHCSC-CCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHHH
T ss_pred             CCCEEEECCCchhcccCC-CCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHH
Confidence            578899998773221112 2479999999999875432 344334556777888888877654  356789999999999


Q ss_pred             HHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcCc-------------EEEEeeccC--C-CCcccC------
Q 021547          123 VEIILTVITR-------LGAANILLPRPGWPFYESFAKRNHI-------------EVRHFDLLP--E-RGWEVD------  173 (311)
Q Consensus       123 ~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~d------  173 (311)
                      ++.+++.+..       +++++|++..|+|+++...+...+.             .+..++...  . .++ +|      
T Consensus       124 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~  202 (459)
T 4a6r_A          124 VDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGV  202 (459)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHH
Confidence            9999999976       3339999999999987655444322             223333211  0 111 34      


Q ss_pred             --HHHHHhhcCC---CccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547          174 --LEAVEALADE---NTAAIVIINP-CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV  246 (311)
Q Consensus       174 --~~~l~~~l~~---~~~~i~i~~p-~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~  246 (311)
                        +++|++.+..   +..++++++| ++++|. .++++.+++|.++|++||+++|+||+|.++.+.|.. .....+....
T Consensus       203 ~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~-~~~~~~~~~p  281 (459)
T 4a6r_A          203 VAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEW-FGHQHFGFQP  281 (459)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SHHHHHTCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccc-chHhhcCCCC
Confidence              6788887752   3445566665 455555 558999999999999999999999999987666642 2223333333


Q ss_pred             CeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHh---hh-hccccCCCchhHHHHHhhhh
Q 021547          247 PVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIK---AC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       247 ~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +++   +|||.++..|+|+||++++.        ++++.+.   .. ...+++.++++|+++.+.|+
T Consensus       282 di~---t~sK~l~gg~~~lg~v~~~~--------~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~  337 (459)
T 4a6r_A          282 DLF---TAAKGLSSGYLPIGAVFVGK--------RVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVA  337 (459)
T ss_dssp             SEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHH
T ss_pred             Cee---ehhhhhcCCCCCccceeeCH--------HHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHH
Confidence            333   68999876669999999853        4777776   33 33467889999999988875

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.90  E-value=3.5e-23  Score=189.95  Aligned_cols=186  Identities=20%  Similarity=0.114  Sum_probs=145.0

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~  162 (311)
                      .+..++|++++++++.        +++++++++++++++++. ++++| |+|+++.|.|.+...    .++..|.+++.+
T Consensus        55 ~~~~~lr~~la~~~g~--------~~~i~~~sGt~a~~~al~-~~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v  124 (393)
T 1n8p_A           55 PNRENLERAVAALENA--------QYGLAFSSGSATTATILQ-SLPQG-SHAVSIGDVYGGTHRYFTKVANAHGVETSFT  124 (393)
T ss_dssp             HHHHHHHHHHHHHTTC--------SEEEEESCHHHHHHHHHH-TSCSS-CEEEEESSCCHHHHHHHHHTSTTTCSCCEEE
T ss_pred             hhHHHHHHHHHHHhCC--------CcEEEECChHHHHHHHHH-HcCCC-CEEEEeCCCchHHHHHHHHHHHHcCcEEEEe
Confidence            4578999999999842        256666666999999999 88999 999999999985443    456678898888


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh----CCEEEEeccccCCccCCCCCCc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL----GILVIADEVYGHLAFGSTPYIP  238 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~----~~~li~D~ay~~~~~~~~~~~~  238 (311)
                      +..       | +++++.++++++++++++|+||||.+++   +++|.++|+++    |+++|+|++|..+.+.  .+  
T Consensus       125 ~~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~--~~--  189 (393)
T 1n8p_A          125 NDL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS--NP--  189 (393)
T ss_dssp             SSH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC--CG--
T ss_pred             CCC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC--CH--
Confidence            753       6 8899999889999999999999999998   99999999999    9999999999976553  11  


Q ss_pred             ccccCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547          239 MGVFGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       239 ~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  308 (311)
                      + .+   +..+++.|+||.++.+|+|+ ||+++.++       ++++.++.... .+...+++.++++.+.+
T Consensus       190 ~-~~---~~di~~~S~sK~~g~~G~rigG~~~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~l  250 (393)
T 1n8p_A          190 L-NF---GADIVVHSATKYINGHSDVVLGVLATNNK-------PLYERLQFLQNAIGAIPSPFDAWLTHRGL  250 (393)
T ss_dssp             G-GG---TCSEEEEETTTTTTCSSCCCCEEEEESCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred             H-Hc---CCeEEEEECcccccCCCCceeEEEEeCCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Confidence            1 22   35599999999999999999 99887432       36666665532 23345666666554443

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.90  E-value=3.1e-22  Score=186.23  Aligned_cols=236  Identities=17%  Similarity=0.072  Sum_probs=165.9

Q ss_pred             CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCC--CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMFN--CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      +++.++||..|.+.  ..++ .+|.+.+++.+++......  .| +.....++++.+++++        ..++|++++|+
T Consensus        74 ~g~~ylD~~sg~~~--~~lgh~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~--------g~~~v~~~~sG  142 (439)
T 2oat_A           74 EGRKYFDFLSSYSA--VNQGHCHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLF--------NYHKVLPMNTG  142 (439)
T ss_dssp             TCCEEEESSGGGGT--TTTCBTCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHH--------TCSEEEEESSH
T ss_pred             CCCEEEEccCCccc--ccCCCCCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhc--------CCCEEEEeCCH
Confidence            36778899887532  1355 8899999999998753211  13 2335567777777776        24789999999


Q ss_pred             HHHHHHHHHHHh---------cCCCCEEEecCCCCcchH-HHHHHcC------------cEEEEeeccCCCCcccCHHHH
Q 021547          120 MEAVEIILTVIT---------RLGAANILLPRPGWPFYE-SFAKRNH------------IEVRHFDLLPERGWEVDLEAV  177 (311)
Q Consensus       120 ~~a~~~~~~~l~---------~~g~d~Vl~~~p~~~~~~-~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l  177 (311)
                      ++|++.++..+.         .+|.|+|++..|+|+++. ..+...|            .++..++.       .|++.|
T Consensus       143 seA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l  215 (439)
T 2oat_A          143 VEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPAL  215 (439)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHH
T ss_pred             HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHH
Confidence            999999998875         244479999999997753 3444434            34455543       289999


Q ss_pred             HhhcC-CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547          178 EALAD-ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS  255 (311)
Q Consensus       178 ~~~l~-~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s  255 (311)
                      ++.++ ++++++++...+|++|. .++++.+++|.++|++||+++|+||+|.++.+.|..+ .+..+....+++   |+|
T Consensus       216 e~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~~~~~~~~~Di~---t~s  291 (439)
T 2oat_A          216 ERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---LLG  291 (439)
T ss_dssp             HHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EEC
T ss_pred             HHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-hHHHhCCCCcEE---Eec
Confidence            99884 55655554444678896 5688899999999999999999999998766555322 222222222333   999


Q ss_pred             ccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          256 KRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       256 K~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |.++ +| +|+||+++++        ++++.+... ...+++.++++++++.+.|+
T Consensus       292 K~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~  338 (439)
T 2oat_A          292 KALS-GGLYPVSAVLCDD--------DIMLTIKPGEHGSTYGGNPLGCRVAIAALE  338 (439)
T ss_dssp             GGGG-TTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred             cccc-CCCCCeEEEEECH--------HHHhccCCCCcccCCCcCHHHHHHHHHHHH
Confidence            9987 58 9999999853        356655543 33456788999988877664

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.90  E-value=9e-23  Score=189.54  Aligned_cols=236  Identities=17%  Similarity=0.153  Sum_probs=155.7

Q ss_pred             CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCC--CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMFN--CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      +++.++||..|.+.  ..++ .+|.+.+++.+++......  .| +.....++++.+++++    |    .++|++++|+
T Consensus        63 ~G~~ylD~~~g~~~--~~lgh~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~v~~~~sG  131 (433)
T 1z7d_A           63 NDKRYYDFLSAYSS--VNQGHCHPNILNAMINQAKNLTICSRAF-FSVPLGICERYLTNLL----G----YDKVLMMNTG  131 (433)
T ss_dssp             TCCEEEESSHHHHT--TTTCBTCHHHHHHHHHHHTTCSCCCTTS-EEHHHHHHHHHHHHHH----T----CSEEEEESSH
T ss_pred             CCCEEEEcccchhh--cccCCCCHHHHHHHHHHHHhCCCccCCc-CCHHHHHHHHHHHhhc----C----CCeEEEeCCH
Confidence            46778899886422  1355 7899999999998753211  12 1122345555555555    2    4789999999


Q ss_pred             HHHHHHHHHHHh---------cCCCCEEEecCCCCcchHH-HHHHcC------------cEEEEeeccCCCCcccCHHHH
Q 021547          120 MEAVEIILTVIT---------RLGAANILLPRPGWPFYES-FAKRNH------------IEVRHFDLLPERGWEVDLEAV  177 (311)
Q Consensus       120 ~~a~~~~~~~l~---------~~g~d~Vl~~~p~~~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~d~~~l  177 (311)
                      ++|+..++..+.         .+|.++|++..|+|.++.. .+...+            .++..++.       .|++.|
T Consensus       132 seA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l  204 (433)
T 1z7d_A          132 AEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEAL  204 (433)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHH
T ss_pred             HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHH
Confidence            999999998864         2454899999999987543 233333            12333332       289999


Q ss_pred             Hhhc-CCCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547          178 EALA-DENTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS  255 (311)
Q Consensus       178 ~~~l-~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s  255 (311)
                      ++.+ +++++++++...+|++|.. ++++.+++|.++|++||+++|+||+|.++.+.|.. ..+..+....+++   |+|
T Consensus       205 e~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~-~~~~~~~~~~di~---t~s  280 (433)
T 1z7d_A          205 EEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKL-LCVHHYNVKPDVI---LLG  280 (433)
T ss_dssp             HHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE---EEC
T ss_pred             HHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcc-hhhHhcCCCCCEE---EEC
Confidence            9988 4566665555446778975 68889999999999999999999999876555532 2222222222333   899


Q ss_pred             ccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          256 KRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       256 K~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |.++ +| +|+||+++++        ++++.+... ...+++.++++++++.+.|+
T Consensus       281 K~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~  327 (433)
T 1z7d_A          281 KALS-GGHYPISAVLAND--------DIMLVIKPGEHGSTYGGNPLAASICVEALN  327 (433)
T ss_dssp             GGGG-TTSSCCEEEEECH--------HHHTTCCTTCCCCTTTTCHHHHHHHHHHHH
T ss_pred             cccc-CCCCCeEEEEECH--------HHHhhhccccccccCCCCHHHHHHHHHHHH
Confidence            9987 79 9999999853        356655543 33456788999988877664

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.89  E-value=5.6e-23  Score=191.91  Aligned_cols=250  Identities=19%  Similarity=0.113  Sum_probs=169.1

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.++||..|.+.... -..+|.+.+++.+++...  ..|....+..+.+..+++++.+.++.. ..++|++|+|+++|
T Consensus        59 ~g~~ylD~~~~~~~~~l-Gh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA  134 (451)
T 3oks_A           59 DGNRLIDLGSGIAVTTV-GNSAPKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPVR-GDKRSALFNSGSEA  134 (451)
T ss_dssp             TSCEEEESSHHHHTCTT-CTTCHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSCC-SSEEEEEESSHHHH
T ss_pred             CCCEEEEcCCCcccccc-CCCCHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCcC-CCCEEEEeCcHHHH
Confidence            47788999877322111 124899999999998753  245544566677888888887765522 35789999999999


Q ss_pred             HHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcCc--------------EEEEeeccC--------CCCc---ccCHHH
Q 021547          123 VEIILTVITR-LGAANILLPRPGWPFYESFAKRNHI--------------EVRHFDLLP--------ERGW---EVDLEA  176 (311)
Q Consensus       123 ~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~--------~~~~---~~d~~~  176 (311)
                      ++.+++.+.. +|.++|++..++|+++...+...+.              .+..++...        .+..   ..+++.
T Consensus       135 ~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  214 (451)
T 3oks_A          135 VENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKR  214 (451)
T ss_dssp             HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHH
Confidence            9999988764 4448999999999977655443321              344444321        0000   012333


Q ss_pred             HHh----hcCCCccEEEEeCCCCCCc-c-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547          177 VEA----LADENTAAIVIINPCNPCG-N-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT  250 (311)
Q Consensus       177 l~~----~l~~~~~~i~i~~p~nptG-~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  250 (311)
                      +++    .+..+..+++++.|.|++| . ..+++.+++|.++|++||++||+||+|.++.+.|. ...+..+....+++ 
T Consensus       215 ~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~-~~~~~~~~~~pdi~-  292 (451)
T 3oks_A          215 AITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGA-MFACEHEGIDPDLI-  292 (451)
T ss_dssp             HHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGTCCCSEE-
T ss_pred             HHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCcccc-chhhhhcCCCCCee-
Confidence            333    3334566777777766555 3 45677799999999999999999999998766554 22333333333333 


Q ss_pred             EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                        ||||.++. |+|+||++++.        ++++.+... ...+++.++++|+++.+.|+
T Consensus       293 --t~sK~l~~-G~~iG~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~aal~  341 (451)
T 3oks_A          293 --VTAKGIAG-GLPLSAVTGRA--------EIMDSPHVSGLGGTYGGNPIACAAALATIE  341 (451)
T ss_dssp             --EECGGGGT-TSSCEEEEEEH--------HHHTCSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred             --eehhhhhC-CcceEEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHHH
Confidence              89999866 99999998853        466666644 34567889999999888775

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.89  E-value=8.2e-22  Score=181.91  Aligned_cols=182  Identities=17%  Similarity=0.151  Sum_probs=146.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC--CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEE
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPM--FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANI  138 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~V  138 (311)
                      ++.++.+.+++.   ... ...|...  ....++++.++++++        .+++++++|+++|+..++.+++++| |+|
T Consensus        32 ~~~~~~~~~~~~---~~~-~~~y~~~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~al~~l~~~g-d~v   98 (412)
T 2cb1_A           32 FKTLEEGQERFA---TGE-GYVYARQKDPTAKALEERLKALEG--------ALEAVVLASGQAATFAALLALLRPG-DEV   98 (412)
T ss_dssp             CSSHHHHHHHHH---HCC-SCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTT-CEE
T ss_pred             cCChHHHHHHhc---ccc-CcCcCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCC-CEE
Confidence            566677766654   222 2356543  457889999999883        2489999999999999999999999 999


Q ss_pred             EecCCCCcchHHH----HHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547          139 LLPRPGWPFYESF----AKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETAR  214 (311)
Q Consensus       139 l~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~  214 (311)
                      +++.|.|..+...    ++..|.+++.++.        |+++|++.++++++++++++|+||||.+++   +++|.++|+
T Consensus        99 i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~  167 (412)
T 2cb1_A           99 VAAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAE  167 (412)
T ss_dssp             EEETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHH
T ss_pred             EEeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHH
Confidence            9999999876554    3457889888864        489999999999999999999999999998   999999999


Q ss_pred             HhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          215 KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       215 ~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      ++|+++|+|++|....+..   .+..    .+..+++.|+||.++.||.|+|++++.+.
T Consensus       168 ~~~~~li~D~~~~~~~~~~---~~~~----~~~di~~~S~~K~~~~~~~~~G~~~~~~~  219 (412)
T 2cb1_A          168 EAGVALVVDNTFGAAGALC---RPLA----WGAHVVVESLTKWASGHGSVLGGAVLSRE  219 (412)
T ss_dssp             HHTCEEEEECGGGTTTTSC---CGGG----GTCSEEEEETTTTTTCSSCCCCEEEEECC
T ss_pred             HcCCEEEEECCCccccccC---Cccc----cCCeEEEECCcccccCCCCcEEEEEEecc
Confidence            9999999999998752211   1111    23459999999999999999999998764

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.89  E-value=1e-22  Score=189.88  Aligned_cols=246  Identities=15%  Similarity=0.124  Sum_probs=165.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPM-FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .++.++||+.+.+....++. +|.+.+++.+.+....   +... .+..++++.+++.+.+.++  ...++|++|+|+++
T Consensus        48 ~g~~~lD~~~~~~~~~lG~~-~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggse  121 (449)
T 3a8u_X           48 KGRKVYDSLSGLWTCGAGHT-RKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSE  121 (449)
T ss_dssp             TCCEEEETTHHHHTCTTCBS-CHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHH
T ss_pred             CCCEEEECCccHhhccCCCC-CHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHH
Confidence            46778899766432122233 7999999999886432   2111 2334566667777766543  35689999999999


Q ss_pred             HHHHHHHHHhc--------CCCCEEEecCCCCcchH-HHHHHcCc------------EEEEeeccC--CCC-cccC----
Q 021547          122 AVEIILTVITR--------LGAANILLPRPGWPFYE-SFAKRNHI------------EVRHFDLLP--ERG-WEVD----  173 (311)
Q Consensus       122 a~~~~~~~l~~--------~g~d~Vl~~~p~~~~~~-~~~~~~g~------------~~~~~~~~~--~~~-~~~d----  173 (311)
                      ++++++.++..        ++ |+|++..|+|+++. ..+...|.            .+..++...  ..+ .++|    
T Consensus       122 a~~~al~~~~~~~~~~g~~~~-~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~  200 (449)
T 3a8u_X          122 CALTAVKMVRAYWRLKGQATK-TKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEG  200 (449)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTC-CEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSS
T ss_pred             HHHHHHHHHHHHHHhcCCCCC-CEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHH
Confidence            99999998864        56 99999999998764 34444431            234443321  111 1245    


Q ss_pred             ----HHHHHhhcC----CCccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          174 ----LEAVEALAD----ENTAAIVIINP-CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       174 ----~~~l~~~l~----~~~~~i~i~~p-~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                          ++.|++.++    +++ .+++++| +|+||. ..+++.+++|.++|++||++||+||+|.++.+.|.. ..+..+.
T Consensus       201 ~~~~~~~le~~l~~~~~~~~-~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~  278 (449)
T 3a8u_X          201 GIALADELLKLIELHDASNI-AAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSM-FGADSFG  278 (449)
T ss_dssp             HHHHHHHHHHHHHHHCGGGE-EEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHT
T ss_pred             HHHHHHHHHHHHHhcCCCCE-EEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcc-hhhhhcC
Confidence                889988876    334 4455666 578997 567999999999999999999999999876554432 2222222


Q ss_pred             CCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh----------hccccCCCchhHHHHHhhhh
Q 021547          244 SIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC----------LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ...+++   |+||.++. | +|+||+++++        ++++.+...          ...+++.++++|+++.+.|+
T Consensus       279 ~~~di~---s~sK~l~~-G~~~~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~  343 (449)
T 3a8u_X          279 VTPDLM---CIAKQVTN-GAIPMGAVIAST--------EIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALC  343 (449)
T ss_dssp             CCCSEE---EECGGGGT-TSSCCEEEEEEH--------HHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHH
T ss_pred             CCCCEE---EEcccccC-CCCceEEEEECH--------HHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHH
Confidence            222333   88999874 7 9999999853        367777653          22356778999988877664

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.89  E-value=7.4e-23  Score=191.08  Aligned_cols=234  Identities=18%  Similarity=0.137  Sum_probs=155.4

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.+|||+.|.+....++ .+|.+.+++.+.+....  .|   .+..++++++++++.+.++   ..++|++|+|+++|
T Consensus        55 ~g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~--~~---~~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA  125 (453)
T 2cy8_A           55 DGNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSHGV--QY---AASHPLEVRWAERIVAAFP---SIRKLRFTGSGTET  125 (453)
T ss_dssp             TCCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTTTC--SS---CSSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHH
T ss_pred             CCCEEEECcccHhhcccCC-CCHHHHHHHHHHHHhCC--CC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHH
Confidence            3667889988854322233 78999999999987532  23   2456899999999988765   56899999999999


Q ss_pred             HHHHHHH---HhcCCCCEEEecCCCCcchHHHHHH-----------cCcE------EEEeeccCCCCcccCHHHHHhhcC
Q 021547          123 VEIILTV---ITRLGAANILLPRPGWPFYESFAKR-----------NHIE------VRHFDLLPERGWEVDLEAVEALAD  182 (311)
Q Consensus       123 ~~~~~~~---l~~~g~d~Vl~~~p~~~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~d~~~l~~~l~  182 (311)
                      +..++.+   +.+ + +.|++..|+|+++...+..           .|..      +..++.       .|++.|++.++
T Consensus       126 ~~~al~~ar~~~~-~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~  196 (453)
T 2cy8_A          126 TLLALRVARAFTG-R-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFA  196 (453)
T ss_dssp             HHHHHHHHHHHHC-C-CEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhC-C-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHH
Confidence            9999988   554 4 6888888999876543221           1221      222221       38899998876


Q ss_pred             C---CccEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCccc
Q 021547          183 E---NTAAIVIINP-CNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR  257 (311)
Q Consensus       183 ~---~~~~i~i~~p-~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~  257 (311)
                      +   ++++ ++++| +|++|.. .+++++++|.++|++||++||+||+|.++ +.+. ...+..+....++   .|+||.
T Consensus       197 ~~~~~~~~-vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~~~~di---~s~sK~  270 (453)
T 2cy8_A          197 NHGSDIAA-FIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGN-HGMQALLDVQPDL---TCLAKA  270 (453)
T ss_dssp             HHGGGEEE-EEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCT-THHHHHHTCCCSE---EEEEGG
T ss_pred             hcCCCEEE-EEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCc-hhhhHHhCCCCcE---EEEChh
Confidence            3   4444 55555 5779975 57999999999999999999999999987 4443 2222222222233   389999


Q ss_pred             CCCCcceeeEEEeeCCCCccchhhHHHHHhh------hhccccCCCchhHHHHHhhhh
Q 021547          258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKA------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       258 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++. |+|+||++++.        ++++.+..      ....++++++++|+++.+.|+
T Consensus       271 l~~-G~~~G~v~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~  319 (453)
T 2cy8_A          271 SAG-GLPGGILGGRE--------DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAID  319 (453)
T ss_dssp             GGT-TSSCEEEEECH--------HHHTTSSSCC---------CCCCHHHHHHHHHHHH
T ss_pred             hhC-CcceEEEechH--------HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHH
Confidence            875 99999999853        35555544      122356788999998887765

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.89  E-value=1.9e-22  Score=188.78  Aligned_cols=251  Identities=16%  Similarity=0.046  Sum_probs=170.6

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.+|||+.|..... .-..+|.+.+++.+++..... .|....+..++++.+++++.+..+  ...++|++|+|+++|
T Consensus        49 ~G~~~lD~~~~~~~~~-lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~gGseA  124 (460)
T 3gju_A           49 NGRKSIDAFAGLYCVN-VGYGRQKIADAIATQAKNLAY-YHAYVGHGTEASITLAKMIIDRAP--KGMSRVYFGLSGSDA  124 (460)
T ss_dssp             TCCEEEETTHHHHTCT-TCBCCHHHHHHHHHHHHHHSC-CCCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred             CCCEEEECCcchhhcc-CCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHHH
Confidence            5788999997722111 123579999999998865322 344334555677777777776543  356799999999999


Q ss_pred             HHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcCc-------------EEEEeeccC---CCCcccC------
Q 021547          123 VEIILTVITR-------LGAANILLPRPGWPFYESFAKRNHI-------------EVRHFDLLP---ERGWEVD------  173 (311)
Q Consensus       123 ~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~d------  173 (311)
                      ++.+++++..       +|+++|++..++|+++...+...+.             .+..++...   .++.+++      
T Consensus       125 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~  204 (460)
T 3gju_A          125 NETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQ  204 (460)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHH
Confidence            9999999875       3449999999999877654443321             234443211   0112233      


Q ss_pred             --HHHHHhhcC----CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547          174 --LEAVEALAD----ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV  246 (311)
Q Consensus       174 --~~~l~~~l~----~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~  246 (311)
                        +++|++.+.    ++++++++..++|++|. .++.+.+++|.++|++||+++|+||+|.++.+.|.. .....++...
T Consensus       205 ~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~-~~~~~~~~~p  283 (460)
T 3gju_A          205 HCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTM-FGSDHYGIKP  283 (460)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-CHHHHHTCCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccc-chHhhcCCCC
Confidence              578888775    34455555555677776 778888999999999999999999999987665532 2222333232


Q ss_pred             CeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh--------hhccccCCCchhHHHHHhhhh
Q 021547          247 PVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA--------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       247 ~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++   .+|||.++..++|+||++++.        ++++.+..        ....+++.++++|+++.+.|+
T Consensus       284 di---~t~sK~l~gG~~~lg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~  343 (460)
T 3gju_A          284 DL---ITIAKGLTSAYAPLSGVIVAD--------RVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLE  343 (460)
T ss_dssp             SE---EEECGGGTTTSSCCEEEEEEH--------HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHH
T ss_pred             Ce---eeeehhhcCCCCCeEEEEECH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence            33   378999755338999999864        47777742        233467889999999988875

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.89  E-value=2.6e-22  Score=184.61  Aligned_cols=199  Identities=14%  Similarity=0.105  Sum_probs=146.0

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEE-EeCChH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIY-ITLGCM  120 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~-~t~g~~  120 (311)
                      .+..+.|+.+.      .+.++.+.+++.+    .....|.+  .....++++.+++++    |  ...++++ +++|++
T Consensus         9 ~~~~~~~~p~p------~~~~~~v~~a~~~----~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~~~~~~~s~t   72 (416)
T 3isl_A            9 TPLRTIMTPGP------VEVDPRVLRVMST----PVVGQFDPAFTGIMNETMEMLRELF----Q--TKNRWAYPIDGTSR   72 (416)
T ss_dssp             CCCCEECSSSS------CCCCHHHHHHTTS----CCCCTTSHHHHHHHHHHHHHHHHHT----T--CCCSEEEEEESCHH
T ss_pred             cccceeecCCC------cCcCHHHHHHhcc----cCCCCccHHHHHHHHHHHHHHHHHh----C--CCCCcEEEecCcHH
Confidence            34556666553      3456777666544    22223332  112344555555555    4  3455555 889999


Q ss_pred             HHHHHHHHHHhcCCCCEEEecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC-CCccEEEEeCCCCCC
Q 021547          121 EAVEIILTVITRLGAANILLPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD-ENTAAIVIINPCNPC  197 (311)
Q Consensus       121 ~a~~~~~~~l~~~g~d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~npt  197 (311)
                      +++..++.+++++| |+|+++.|+|.+  +...++..|.+++.++...  ++.+|+++|++.++ ++++++++++|+|||
T Consensus        73 ~al~~~~~~l~~~g-d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~npt  149 (416)
T 3isl_A           73 AGIEAVLASVIEPE-DDVLIPIYGRFGYLLTEIAERYGANVHMLECEW--GTVFDPEDIIREIKKVKPKIVAMVHGETST  149 (416)
T ss_dssp             HHHHHHHHHHCCTT-CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTT
T ss_pred             HHHHHHHHHhcCCC-CEEEEecCCcccHHHHHHHHhcCCeeEEEecCC--CCCCCHHHHHHHHhhCCCcEEEEEccCCCC
Confidence            99999999999999 999999999987  7778899999999998753  45789999999987 589999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      |..++   +++|.++|++||+++|+|++|+....    ...+.   ..+..+++.|+||+++ .+.++|++++++
T Consensus       150 G~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~---~~~~d~~~~s~~K~l~-g~~g~g~~~~~~  213 (416)
T 3isl_A          150 GRIHP---LKAIGEACRTEDALFIVDAVATIGGC----EVKVD---EWKIDAAIGGTQKCLS-VPSGMAPITYNE  213 (416)
T ss_dssp             TEECC---CHHHHHHHHHTTCEEEEECTTTTTTS----CCCTT---TTTCSEEECCSSSTTC-CCSSEEEEEECH
T ss_pred             ceecC---HHHHHHHHHHcCCEEEEECCccccCC----Ccchh---hcCCCEEEecCccccC-CCCCeEEEEECH
Confidence            99999   89999999999999999999874221    11121   1234599999999733 234589988753

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.89  E-value=8.8e-23  Score=185.77  Aligned_cols=202  Identities=10%  Similarity=0.032  Sum_probs=151.4

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPM--FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      ++.+.|+.|.      .+.++.+.+++.+....    .|.+.  ....++++.+++++....+  +++++|++|+|++++
T Consensus         4 ~~~~~~~p~p------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~v~~~~g~t~a   71 (385)
T 2bkw_A            4 SVDTLLIPGP------IILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAAA--SKSQPFVLAGSGTLG   71 (385)
T ss_dssp             CCCEECSSSS------CCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCGG--GTCEEEEEESCTTHH
T ss_pred             ccceeecCCC------cCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCCC--CCCceEEEcCchHHH
Confidence            4557777774      35567888777654321    23221  1356778888888865332  356899999999999


Q ss_pred             HHHHHHHHh---cCCCCEEEec-CCCCcch-HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCC
Q 021547          123 VEIILTVIT---RLGAANILLP-RPGWPFY-ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNP  196 (311)
Q Consensus       123 ~~~~~~~l~---~~g~d~Vl~~-~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~np  196 (311)
                      +.+++.++.   ++| |+|++. .+.|..+ ...++..|.+++.++.. ..++.+|+++|++.+++ +++++++++|+||
T Consensus        72 l~~~~~~~~~~~~~g-d~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~np  149 (385)
T 2bkw_A           72 WDIFASNFILSKAPN-KNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTS  149 (385)
T ss_dssp             HHHHHHHHSCTTCSC-CEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETT
T ss_pred             HHHHHHHHhccCCCC-CeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCC
Confidence            999999998   899 999887 5566655 36778899999999862 24567899999998876 7999999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHh--CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCC-CCcceeeEEEeeC
Q 021547          197 CGNVLTYQHLQKIAETARKL--GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI-VPGWRFGWLATND  272 (311)
Q Consensus       197 tG~~~~~~~l~~l~~l~~~~--~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~G~i~~~~  272 (311)
                      ||.+++   +++|.++|+++  |+++|+|++|+...    ....+..   .+..+++.|+||+++ .+|  +||+++++
T Consensus       150 tG~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~----~~~~~~~---~~~d~~~~s~~K~~~~~~G--~G~~~~~~  216 (385)
T 2bkw_A          150 TAVLSD---LKAISQAIKQTSPETFFVVDAVCSIGC----EEFEFDE---WGVDFALTASQKAIGAPAG--LSISLCSS  216 (385)
T ss_dssp             TTEECC---HHHHHHHHHHHCTTSEEEEECTTTTTT----SCCCTTT---TTCSEEEEESSSTTCCCSC--EEEEEECH
T ss_pred             cCeEcC---HHHHHHHHHhhCCCCEEEEECccccCC----ccccccc---cCceEEEecCccccccCCc--ceEEEEcH
Confidence            999999   88999999999  99999999998421    1112222   234589999999654 466  49998854

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.89  E-value=3.3e-22  Score=180.38  Aligned_cols=199  Identities=13%  Similarity=0.057  Sum_probs=146.6

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA-PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE  124 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~  124 (311)
                      +.++|+-|.      .+.++.+.+++.+.+..+.. .|. ...+..++.+.+.+++.+.+|.. .+++|++|+|+++++.
T Consensus         4 ~~~~~~p~p------~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~   75 (362)
T 3ffr_A            4 NKIYFTPGP------SELYPTVRQHMITALDEKIG-VISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWE   75 (362)
T ss_dssp             CCEEECSSS------CCCCTTHHHHHHHHHHTTTT-TSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHH
T ss_pred             cceeccCCC------cCCCHHHHHHHHHHhcCCcc-CcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHH
Confidence            456777663      35677888888887765432 121 22244456666666666666643 5678999999999999


Q ss_pred             HHHHHHhcCCCCEEEecCCCCcc-hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          125 IILTVITRLGAANILLPRPGWPF-YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       125 ~~~~~l~~~g~d~Vl~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      +++.++.++  +.+++..+.|.. +...++..|.+++.++..  .++.+|+++++  ++++++++++++|+||||.+++ 
T Consensus        76 ~~~~~l~~~--~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~-  148 (362)
T 3ffr_A           76 RIIQNCVEK--KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP-  148 (362)
T ss_dssp             HHHHHHCSS--EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC-
T ss_pred             HHHHhccCC--cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC-
Confidence            999999865  455566666652 345778889999999864  45678999998  7789999999999999999999 


Q ss_pred             HHHHHHHHHHHHh-CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCC-CCcceeeEEEeeC
Q 021547          204 QHLQKIAETARKL-GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI-VPGWRFGWLATND  272 (311)
Q Consensus       204 ~~l~~l~~l~~~~-~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~G~i~~~~  272 (311)
                        +++|.++|++| |+++|+|++|+....    ...+..     ..+++.|+||+++ .+|+  |++++++
T Consensus       149 --l~~i~~la~~~p~~~li~D~a~~~~~~----~~~~~~-----~d~~~~s~~K~~~~~~G~--g~~~~~~  206 (362)
T 3ffr_A          149 --VEDINTFRDKNKDALIFVDAVSSLPYP----KFDWTK-----IDSVFFSVQKCFGLPAGL--GVWILND  206 (362)
T ss_dssp             --HHHHTTSGGGSTTSEEEEECTTTTTSS----CCCTTS-----CSEEEEETTSTTCCCSCC--EEEEEEH
T ss_pred             --HHHHHHHHHhCCCCEEEEecccccCCc----ccChhH-----CcEEEEecccccCCCCce--EEEEECH
Confidence              88899999999 999999999986331    111111     3388999999998 6774  6666643

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.89  E-value=1.2e-22  Score=185.17  Aligned_cols=197  Identities=15%  Similarity=0.047  Sum_probs=146.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEE
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANI  138 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~V  138 (311)
                      .++++.+.+++.+...    ..|.+  .....++++.+++++.    .. ..++|++|+|+++++..++.+++++| |+|
T Consensus        32 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~~----~~-~~~~v~~~~gg~~al~~~~~~~~~~g-d~v  101 (393)
T 3kgw_A           32 SNLAPRVLAAGSLRMI----GHMQKEMLQIMEEIKQGIQYVFQ----TR-NPLTLVVSGSGHCAMETALFNLLEPG-DSF  101 (393)
T ss_dssp             CCCCHHHHHHTTCCCC----CTTSHHHHHHHHHHHHHHHHHHT----CC-CSEEEEESCCTTTHHHHHHHHHCCTT-CEE
T ss_pred             CCCCHHHHHHhccccc----CcccHHHHHHHHHHHHHHHHHhC----CC-CCcEEEEeCCcHHHHHHHHHhcCCCC-CEE
Confidence            4667888888765321    12222  1234466666666663    22 23369999999999999999999999 999


Q ss_pred             EecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547          139 LLPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARK  215 (311)
Q Consensus       139 l~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~  215 (311)
                      +++.+.|.+  +...++..|.+++.++...  ++.+|+++|++.+++ +++++++++|+||||..++   +++|.++|++
T Consensus       102 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~  176 (393)
T 3kgw_A          102 LTGTNGIWGMRAAEIADRIGARVHQMIKKP--GEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHR  176 (393)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             EEEeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHH
Confidence            999888853  3678888999999998743  346899999999987 8999999999999999999   8899999999


Q ss_pred             hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh
Q 021547          216 LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA  288 (311)
Q Consensus       216 ~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~  288 (311)
                      ||+++|+|++|+...    ....+   ...+..+++.|+||+++. +.++||+++++        ++++.+..
T Consensus       177 ~~~~li~De~~~~g~----~~~~~---~~~~~d~~~~s~sK~~~~-~~g~g~~~~~~--------~~~~~~~~  233 (393)
T 3kgw_A          177 YQCLLLVDSVASLGG----VPIYM---DQQGIDIMYSSSQKVLNA-PPGISLISFND--------KAKYKVYS  233 (393)
T ss_dssp             TTCEEEEECTTTTTT----SCCCT---TTTTCCEEEEESSSTTCC-CSSCEEEEECH--------HHHHHHHT
T ss_pred             cCCEEEEECCccccC----cccch---hhcCCCEEEecCcccccC-CCceeEEEECH--------HHHHHHhc
Confidence            999999999988421    11111   122345888999997632 23489998853        46666654

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.89  E-value=1.7e-22  Score=188.43  Aligned_cols=247  Identities=15%  Similarity=0.049  Sum_probs=163.4

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.++||..|.+....+. .+|.+.+++.+++....  .|....+..+.++++++++.+.++.  ..++|++|+|+++|
T Consensus        42 ~g~~ylD~~~~~~~~~lG~-~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~~--~~~~v~~~~sGseA  116 (448)
T 3dod_A           42 NGKEYYDGFSSVWLNVHGH-RKKELDDAIKKQLGKIA--HSTLLGMTNVPATQLAETLIDISPK--KLTRVFYSDSGAEA  116 (448)
T ss_dssp             TSCEEEETTHHHHTCSSCB-SCHHHHHHHHHHHTTCS--CCCCSSSEEHHHHHHHHHHHHHSCT--TEEEEEEESSHHHH
T ss_pred             CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCchHHH
Confidence            5788999998743222222 47999999999987542  3434456667788888888876643  44799999999999


Q ss_pred             HHHHHHHHhc----CC---CCEEEecCCCCcchHHHHHHcCc-------------EEEEeeccCCCCcc-----------
Q 021547          123 VEIILTVITR----LG---AANILLPRPGWPFYESFAKRNHI-------------EVRHFDLLPERGWE-----------  171 (311)
Q Consensus       123 ~~~~~~~l~~----~g---~d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~-----------  171 (311)
                      ++.+++.+..    +|   +|+|++..|+|+++...+...+.             .+..++..  +.+.           
T Consensus       117 ~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  194 (448)
T 3dod_A          117 MEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP--YVYRSESGDPDECRD  194 (448)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC--CCTTSSSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC--ccccCCccchhhhhH
Confidence            9999999875    33   49999999999876543333322             12223221  1111           


Q ss_pred             cCHHHHHhhcC---CCccEEEEeCCC-CCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547          172 VDLEAVEALAD---ENTAAIVIINPC-NPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV  246 (311)
Q Consensus       172 ~d~~~l~~~l~---~~~~~i~i~~p~-nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~  246 (311)
                      .|++.|++.++   ++++++++..++ |++| ..++.+.+++|.++|++||++||+||+|.++.+.|..+ ....+....
T Consensus       195 ~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~~  273 (448)
T 3dod_A          195 QCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQP  273 (448)
T ss_dssp             HHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCC
T ss_pred             HHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCCC
Confidence            14788888876   345555555555 7787 45678889999999999999999999999876655432 223333232


Q ss_pred             CeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhh-------h-hccccCCCchhHHHHHhhhh
Q 021547          247 PVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKA-------C-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       247 ~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++   .++||.++. | +|+||++++.        ++++.+..       . ...+++.++++|+++.+.|+
T Consensus       274 di---~t~sK~l~~-G~~~ig~v~~~~--------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~  333 (448)
T 3dod_A          274 DL---MAAGKGITG-GYLPIAVTFATE--------DIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLA  333 (448)
T ss_dssp             SE---EEECGGGGT-TSSCCEEEEEEH--------HHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             CE---EEecccccC-CcCceEEEEECH--------HHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHH
Confidence            33   378999865 9 5999999864        47777765       3 33567889999999888775

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.89  E-value=5.2e-23  Score=188.89  Aligned_cols=218  Identities=16%  Similarity=0.109  Sum_probs=151.4

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---CcHH--HHHHHH-HHHhhcCCCCCCCCCEEEeC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF---GLPL--ARRAVA-EYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~---g~~~--lr~~ia-~~l~~~~g~~~~~~~v~~t~  117 (311)
                      +.++|+|..|.+.    +  ++.+.+++.+.+.......|+.+.   |.+.  +++.++ +++.+.+|  .++++|++++
T Consensus        22 ~~~~i~~~~~~~~----~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g--~~~~~i~~~s   93 (407)
T 2dkj_A           22 QREGLELIASENF----V--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFG--AAWANVQPHS   93 (407)
T ss_dssp             HHTSEECCTTCCC----C--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSS
T ss_pred             hhcceeeccCCCC----C--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhC--CCcceEEecc
Confidence            3578999999742    2  799999999887642233455332   4443  333221 23333333  2344566666


Q ss_pred             ChHHHHHHHHHHHhcCCCCEEEecCCCCcch---HHHHHHcCcEEEEeecc-CCCCcccCHHHHHhhcCC-CccEEEEeC
Q 021547          118 GCMEAVEIILTVITRLGAANILLPRPGWPFY---ESFAKRNHIEVRHFDLL-PERGWEVDLEAVEALADE-NTAAIVIIN  192 (311)
Q Consensus       118 g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~---~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~-~~~~i~i~~  192 (311)
                      | ++++.+++.+++++| |+|+++.|+|..+   ...++..|.++..++.. ..+++.+|++.+++.+++ +++++++++
T Consensus        94 G-t~a~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~  171 (407)
T 2dkj_A           94 G-SQANMAVYMALMEPG-DTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGA  171 (407)
T ss_dssp             H-HHHHHHHHHHHCCTT-CEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECC
T ss_pred             h-HHHHHHHHHHhcCCC-CEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEec
Confidence            6 569999999999999 9999999999887   34455556533334332 123578999999998874 889999989


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      |+||  ...+   +++|.++|+++|+++|+|++|+. +.+.+.....+   .  ..++++.|+||.  ++|.|+||++++
T Consensus       172 p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~--~~di~~~s~sK~--l~g~~~G~~~~~  239 (407)
T 2dkj_A          172 SAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL---P--YAHVVTSTTHKT--LRGPRGGLILSN  239 (407)
T ss_dssp             SSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCT---T--TCSEEEEESSGG--GCCCSCEEEEES
T ss_pred             cccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCcc---c--cccEEEEecccc--CCCCCceEEEEC
Confidence            9998  5566   89999999999999999999997 55544322111   1  145899999995  568899999986


Q ss_pred             CCCCccchhhHHHHHhhhh
Q 021547          272 DPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~  290 (311)
                      ++       ++++.+....
T Consensus       240 ~~-------~~~~~l~~~~  251 (407)
T 2dkj_A          240 DP-------ELGKRIDKLI  251 (407)
T ss_dssp             CH-------HHHHHHHHHH
T ss_pred             CH-------HHHHHHHhhh
Confidence            42       3677776654

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.89  E-value=3.5e-22  Score=189.47  Aligned_cols=184  Identities=15%  Similarity=0.100  Sum_probs=152.2

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCE--EEeCChHHHHHHHHHHHhcCCC-------CEEEecCCCCcchHHHH
Q 021547           82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDI--YITLGCMEAVEIILTVITRLGA-------ANILLPRPGWPFYESFA  152 (311)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v--~~t~g~~~a~~~~~~~l~~~g~-------d~Vl~~~p~~~~~~~~~  152 (311)
                      .|....+..++++.+++++.+.+|.+.+++++  ++|+|+++++..++.++..+|.       |+|+++.|+|..+...+
T Consensus       130 ~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~  209 (514)
T 3mad_A          130 HPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAA  209 (514)
T ss_dssp             CTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHH
T ss_pred             ccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHH
Confidence            45555577789999999999888876656788  9999999999999999976541       79999999999999999


Q ss_pred             HHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc-
Q 021547          153 KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF-  231 (311)
Q Consensus       153 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~-  231 (311)
                      +..|++++.++++.  ++.+|++.|+++++++++++++++|+||||.+.+   +++|.++|++||+++|+|++|+.+.+ 
T Consensus       210 ~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~~~~  284 (514)
T 3mad_A          210 QYFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGFILP  284 (514)
T ss_dssp             HHHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTTTHH
T ss_pred             HHcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEecccccccch
Confidence            99999999998753  6789999999999999999999999999999998   89999999999999999999998654 


Q ss_pred             ----CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          232 ----GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       232 ----~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                          .|.+..++. ....+..+++.|++|. +.+|.++|++++.+
T Consensus       285 ~~~~~g~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~  327 (514)
T 3mad_A          285 WAERLGYPVPPFD-FRLEGVTSVSADTHKY-GYGAKGTSVILYRR  327 (514)
T ss_dssp             HHHHTTCCCCCCS-TTSTTCCEEEECTTTT-TCCCSSCEEEEESS
T ss_pred             hHHhcCCCCCccc-ccCCCCcEEEECchhc-cCCCCCeEEEEEeC
Confidence                122111221 1223345889999998 46778999999865

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.89  E-value=6.6e-22  Score=179.83  Aligned_cols=194  Identities=17%  Similarity=0.125  Sum_probs=154.7

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEec
Q 021547           63 TAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLP  141 (311)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~  141 (311)
                      .++.+.+++.+.+...   .|.+..+..++|+.++++++        .+++++++|+++|+..++.++ +++| |+|+++
T Consensus        15 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~~l~~l~~~~g-d~Vi~~   82 (373)
T 3frk_A           15 IEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHLILKGYDIGFG-DEVIVP   82 (373)
T ss_dssp             HHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHTTCCTT-CEEEEE
T ss_pred             CCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcCCCCc-CEEEEC
Confidence            4677888888887654   36666788999999999994        247999999999999999999 8899 999999


Q ss_pred             CCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547          142 RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVI  221 (311)
Q Consensus       142 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li  221 (311)
                      .++|..+...++..|.+++.++.++ +++.+|++++++.+++++++++   |+||||...+   +++|.++|+++|+++|
T Consensus        83 ~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li  155 (373)
T 3frk_A           83 SNTFIATALAVSYTGAKPIFVEPDI-RTYNIDPSLIESAITEKTKAII---AVHLYGQPAD---MDEIKRIAKKYNLKLI  155 (373)
T ss_dssp             TTSCTHHHHHHHHHSCEEEEECEET-TTTEECGGGTGGGCCTTEEEEE---EECCTTCCCC---HHHHHHHHHHHTCEEE
T ss_pred             CCCcHHHHHHHHHcCCEEEEEeccc-cccCcCHHHHHHhcCCCCeEEE---EECCCcCccc---HHHHHHHHHHcCCEEE
Confidence            9999999999999999999998754 4578999999999988888877   6789999888   8899999999999999


Q ss_pred             EeccccCC-ccCCCCCCcccccCCCCCeEEEecCc--ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547          222 ADEVYGHL-AFGSTPYIPMGVFGSIVPVITLGSIS--KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       222 ~D~ay~~~-~~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  290 (311)
                      +|++|+.. .+++....   .+.    .+.+.|||  |.++.+|. .|+++++++       ++.++++...
T Consensus       156 ~D~a~~~g~~~~~~~~~---~~~----d~~~~S~~~~K~l~~~g~-gg~~~~~~~-------~~~~~~~~~~  212 (373)
T 3frk_A          156 EDAAQAHGSLYKGMKVG---SLG----DAAGFSFYPAKNLGSLGD-GGAVVTNDK-------DLAEKIKALS  212 (373)
T ss_dssp             EECTTCTTCEETTEETT---SSS----SEEEEECCTTSSSCCSSS-CEEEEESCH-------HHHHHHHHHH
T ss_pred             EECCcccCCEECCEecc---ccc----cEEEEeCcCCCccCccce-eEEEEeCCH-------HHHHHHHHHH
Confidence            99999853 33332211   111    27888977  88655454 788887543       3666666543

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.89  E-value=8.9e-22  Score=180.51  Aligned_cols=191  Identities=14%  Similarity=0.166  Sum_probs=151.8

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCC--cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEe
Q 021547           64 AAVAEDAIVDSVRSSMFNCYAPMFG--LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILL  140 (311)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g--~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~  140 (311)
                      ++++.+++.+.+..    .|.++.|  ..++|++++++++        .+++++|+|+++++.+++.++ +++| |+|++
T Consensus        11 ~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~~~g-d~Vl~   77 (394)
T 1o69_A           11 GGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQD-DIVLA   77 (394)
T ss_dssp             -CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTT-CEEEE
T ss_pred             CHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCC-CEEEE
Confidence            35678888888764    3555557  8999999999993        268999999999999999999 8899 99999


Q ss_pred             cCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhC
Q 021547          141 PRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLG  217 (311)
Q Consensus       141 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~  217 (311)
                      +.|+|..+...++..|.+++.++++  .++.+|++.+++.+++   +++++++++   |+|...+   +++|.++|+++|
T Consensus        78 ~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~~  149 (394)
T 1o69_A           78 SSFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEICKEND  149 (394)
T ss_dssp             ESSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHHHHHTT
T ss_pred             CCCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHHHHHcC
Confidence            9999999999999999999999875  5678999999998875   688988885   8998776   999999999999


Q ss_pred             CEEEEecccc-CCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547          218 ILVIADEVYG-HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       218 ~~li~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      +++|+|++|. ++.+.+.+...   +.  .  +.+.|+||..+++|.|+||++++++       +++++++..
T Consensus       150 ~~li~Dea~~~g~~~~~~~~~~---~~--~--~~~~s~s~~K~l~~~~~G~~~~~~~-------~l~~~l~~~  208 (394)
T 1o69_A          150 IVLIEDAAEALGSFYKNKALGT---FG--E--FGVYSYNGNKIITTSGGGMLIGKNK-------EKIEKARFY  208 (394)
T ss_dssp             CEEEEECTTCTTCEETTEETTS---SS--S--EEEEECCTTSSSCCSSCEEEEESCH-------HHHHHHHHH
T ss_pred             CEEEEECcCcccceeCCccccc---cc--C--cEEEEEeCCccCCCCCceEEEECCH-------HHHHHHHHH
Confidence            9999999999 56555432211   11  1  4555664444556789999998543       367777655

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.89  E-value=3.2e-22  Score=188.04  Aligned_cols=249  Identities=16%  Similarity=0.128  Sum_probs=174.1

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.+|||..|......+ ..+|.+.+++.+++.....  +....+..+.+.++++++.+.++.  ..++|++++|+++|
T Consensus        52 ~G~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~~--~~~~~~~~~~~~~la~~l~~~~~~--~~~~v~~~~sGseA  126 (476)
T 3i5t_A           52 DGRRLIDGPAGMWCAQVG-YGRREIVDAMAHQAMVLPY--ASPWYMATSPAARLAEKIATLTPG--DLNRIFFTTGGSTA  126 (476)
T ss_dssp             TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHCCC--CCTTTCBCHHHHHHHHHHHTTSST--TCCEEEEESSHHHH
T ss_pred             CCCEEEECCCchhhccCC-CCCHHHHHHHHHHHHhccC--cccCccCCHHHHHHHHHHHhcCCC--CcCEEEEeCchHHH
Confidence            578899998773211111 2589999999999875321  222246678899999999887653  44689999999999


Q ss_pred             HHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcCcE-------------EEEeeccCC-CCcccC--------
Q 021547          123 VEIILTVITR-------LGAANILLPRPGWPFYESFAKRNHIE-------------VRHFDLLPE-RGWEVD--------  173 (311)
Q Consensus       123 ~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~-~~~~~d--------  173 (311)
                      ++.+++.+..       +|+++|++..|.|.++...+...+..             +..++.... ..+..+        
T Consensus       127 ~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  206 (476)
T 3i5t_A          127 VDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDL  206 (476)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHH
Confidence            9999999864       34489999999999876555543321             222221110 001122        


Q ss_pred             HHHHHhhcC----CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccc-ccCCCCC
Q 021547          174 LEAVEALAD----ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG-VFGSIVP  247 (311)
Q Consensus       174 ~~~l~~~l~----~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~-~~~~~~~  247 (311)
                      +++|++.++    ++++++++..++|++|. +++++.+++|.++|++||+++|+||+|.++.+.|.. .... .+...++
T Consensus       207 ~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~-~~~~~~~~v~pd  285 (476)
T 3i5t_A          207 VQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEW-FASEKVFGVVPD  285 (476)
T ss_dssp             HHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-CHHHHTTCCCCS
T ss_pred             HHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCc-eeeecccCCCcc
Confidence            678888775    34566666666788885 788899999999999999999999999988666642 2223 3333334


Q ss_pred             eEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhh--------hccccCCCchhHHHHHhhhh
Q 021547          248 VITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKAC--------LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       248 ~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++   ++||.++. | +|+|+++++.        ++++.+...        ...+++.++++|+++.+.|+
T Consensus       286 i~---t~sK~l~~-G~~plg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~  344 (476)
T 3i5t_A          286 II---TFAKGVTS-GYVPLGGLAISE--------AVLARISGENAKGSWFTNGYTYSNQPVACAAALANIE  344 (476)
T ss_dssp             EE---EECGGGGT-TSSCCEEEEECH--------HHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHH
T ss_pred             hh---hhhhhhcC-CCcCeEEEEECH--------HHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHH
Confidence            44   68899875 8 9999999853        477777642        33567889999999988775

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.89  E-value=2.7e-21  Score=180.47  Aligned_cols=203  Identities=15%  Similarity=0.047  Sum_probs=160.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC---CCEEEeCChHHHHHHHHHHHhc-----
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA---DDIYITLGCMEAVEIILTVITR-----  132 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~---~~v~~t~g~~~a~~~~~~~l~~-----  132 (311)
                      .+.++.+.+++.+.+..+.. +|...++..++++.+.+++.+.+|.+...   ..+++|+|+++++..++.++..     
T Consensus        52 ~~~~~~v~e~~~~a~~~~~~-~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~  130 (452)
T 2dgk_A           52 TWDDENVHKLMDLSINKNWI-DKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKR  130 (452)
T ss_dssp             CCCCHHHHHHHHHTTTCBTT-CTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHhccCCC-ChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHH
Confidence            34568888998888754333 56666688889999999999888865432   2489999999999999888754     


Q ss_pred             ---CC----CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHH
Q 021547          133 ---LG----AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQH  205 (311)
Q Consensus       133 ---~g----~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~  205 (311)
                         +|    .++|+++. .|..+...++..|++++.+++++ +++.+|+++|++.+++++++|++++|+||||.+.+   
T Consensus       131 ~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---  205 (452)
T 2dgk_A          131 MEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEF---  205 (452)
T ss_dssp             HHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCC---
T ss_pred             HHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCC---
Confidence               44    26999999 99999999999999999998753 36889999999999999999999999999999988   


Q ss_pred             HHHHHHHHHHh------CCEEEEeccccCCcc---CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          206 LQKIAETARKL------GILVIADEVYGHLAF---GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       206 l~~l~~l~~~~------~~~li~D~ay~~~~~---~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      +++|.++|+++      |+++++|++|+.+..   .+.....+   ...+-.+++.|++| |++.|.++||+++.++
T Consensus       206 l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~  278 (452)
T 2dgk_A          206 PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF---RLPRVKSISASGHK-FGLAPLGCGWVIWRDE  278 (452)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST---TSTTEEEEEEETTT-TTCCCSSCEEEEESSG
T ss_pred             HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc---CCCCCcEEEECccc-ccCCCCCeEEEEEcCH
Confidence            89999999996      999999999998642   22111111   11123467779999 5788999999999654

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.88  E-value=9e-23  Score=190.80  Aligned_cols=250  Identities=14%  Similarity=0.045  Sum_probs=167.6

Q ss_pred             CCC--CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           43 DPR--PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        43 ~~~--~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      +++  .+|||..|......+ ..+|.+.+++.+++....  .+....+..+....+++.+.+.++  ...++|++|+|++
T Consensus        71 dG~~~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~L~e~la~~~~--~~~~~v~~~~sGs  145 (457)
T 3tfu_A           71 DGQPIEVLDAMSSWWTAIHG-HGHPALDQALTTQLRVMN--HVMFGGLTHEPAARLAKLLVDITP--AGLDTVFFSDSGS  145 (457)
T ss_dssp             TTEEEEEEETTHHHHTCTTC-BTCHHHHHHHHHHHHHCS--CCCSSSEECHHHHHHHHHHHHHSS--TTEEEEEEESSHH
T ss_pred             CCCeeEEEECCCcHhhhccC-CCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCcHH
Confidence            466  889998763211112 268999999999887532  121111222344444444444333  3456999999999


Q ss_pred             HHHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcC--------------cEEEEeeccCCCCcccCHHHHHh
Q 021547          121 EAVEIILTVITR-------LGAANILLPRPGWPFYESFAKRNH--------------IEVRHFDLLPERGWEVDLEAVEA  179 (311)
Q Consensus       121 ~a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~~~d~~~l~~  179 (311)
                      +|++.+++.+..       +|.+.|++..+.|.++...+...+              .....++.........|++.|++
T Consensus       146 eA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~  225 (457)
T 3tfu_A          146 VSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEA  225 (457)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHH
Confidence            999999998875       664689999999987654444431              12333333221112247888988


Q ss_pred             hcC---CCccEEEEeC-CCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecC
Q 021547          180 LAD---ENTAAIVIIN-PCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSI  254 (311)
Q Consensus       180 ~l~---~~~~~i~i~~-p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~  254 (311)
                      .++   ++++++++.. ++|++|..+ +.+.+++|.++|++||+++|+||+|.++.+.|.. ..+..+....+++   +|
T Consensus       226 ~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~-~a~~~~~~~pdii---t~  301 (457)
T 3tfu_A          226 QLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGAL-FAADHAGVSPDIM---CV  301 (457)
T ss_dssp             HHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCSEE---EE
T ss_pred             HHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccch-hHhHhcCCCceEE---EE
Confidence            886   5667777777 789999866 7778999999999999999999999987665542 2333333333444   89


Q ss_pred             cccCCCCcceeeEEEeeCCCCccchhhHHHHHhh------hhccccCCCchhHHHHHhhhh
Q 021547          255 SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       255 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ||.++...+|+||++++.        ++++.+..      ....+++.++++|+++.+.|+
T Consensus       302 sK~l~gG~~~lG~v~~~~--------~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~  354 (457)
T 3tfu_A          302 GKALTGGYLSLAATLCTA--------DVAHTISAGAAGALMHGPTFMANPLACAVSVASVE  354 (457)
T ss_dssp             CGGGGTTSSCCEEEEEEH--------HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             ChhhhCCCcceEEEEEcH--------HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHH
Confidence            998654227999999864        47777741      233467889999999888775

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.88  E-value=2.2e-21  Score=176.02  Aligned_cols=193  Identities=14%  Similarity=0.113  Sum_probs=152.9

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH---hcCCCCEE
Q 021547           62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI---TRLGAANI  138 (311)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l---~~~g~d~V  138 (311)
                      ++++.+.+++.+.+...   .|.+.....++|++++++++.        +++++|+|+++++..++.++   +++| |+|
T Consensus        10 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~v~~~~ggt~al~~~~~~~~~~~~~g-d~V   77 (375)
T 2fnu_A           10 CLDKEDKKAVLEVLNSK---QLTQGKRSLLFEEALCEFLGV--------KHALVFNSATSALLTLYRNFSEFSADR-NEI   77 (375)
T ss_dssp             CCCHHHHHHHHHHHTSS---CCSSSHHHHHHHHHHHHHHTC--------SEEEEESCHHHHHHHHHHHSSCCCTTS-CEE
T ss_pred             CCCHHHHHHHHHHHHcC---cccCChHHHHHHHHHHHHhCC--------CeEEEeCCHHHHHHHHHHHhcccCCCC-CEE
Confidence            46789999999988643   234455678999999999942        38999999999999999999   8899 999


Q ss_pred             EecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCC
Q 021547          139 LLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGI  218 (311)
Q Consensus       139 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~  218 (311)
                      +++.|+|..+...++..|++++.+++++.  ..+|++.+++.+++++++++++++   ||...+   +++|.++|+++|+
T Consensus        78 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~  149 (375)
T 2fnu_A           78 ITTPISFVATANMLLESGYTPVFAGIKND--GNIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHSL  149 (375)
T ss_dssp             EECSSSCTHHHHHHHHTTCEEEECCBCTT--SSBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHTC
T ss_pred             EECCCccHhHHHHHHHCCCEEEEeccCCC--CCCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcCC
Confidence            99999999999999999999999987543  368999999999888888888876   999988   8999999999999


Q ss_pred             EEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc--ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547          219 LVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS--KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       219 ~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      ++|+|++|+.......  ..+..+   + .+.+.|+|  |.++. |  +|++++.+.      ++++++++..
T Consensus       150 ~li~D~a~~~~~~~~~--~~~~~~---~-~i~~~s~s~~K~~~~-g--~g~~~~~~~------~~~~~~~~~~  207 (375)
T 2fnu_A          150 SFLSDSSHALGSEYQN--KKVGGF---A-LASVFSFHAIKPITT-A--EGGAVVTND------SELHEKMKLF  207 (375)
T ss_dssp             EEEEECTTCTTCEETT--EETTSS---S-SEEEEECCTTSSSCC-S--SCEEEEESC------HHHHHHHHHH
T ss_pred             EEEEECccccCCeECC--eecccc---C-CeEEEeCCCCCCccc-c--CceEEEeCC------HHHHHHHHHH
Confidence            9999999986432111  111111   1 37888888  99855 6  788887432      1366666654

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.88  E-value=1.7e-22  Score=186.07  Aligned_cols=214  Identities=15%  Similarity=0.101  Sum_probs=143.3

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC------YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      ..|+|..+.      .+.++.+.+++.+.+.......      |.......++++.+.+++.+.+|  .++++|++++| 
T Consensus        26 ~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~~sG-   96 (417)
T 3n0l_A           26 EGLEMIASE------NFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQPNSG-   96 (417)
T ss_dssp             HSEECCTTC------CCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH-
T ss_pred             cCeeeeccc------CCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEeccH-
Confidence            567776654      2348899999988774321112      22223334566544445544444  35566888777 


Q ss_pred             HHHHHHHHHHHhcCCCCEEEecCCCCcchHH---HHHHcC--cEEEEeeccCCCCcccCHHHHHhhcC-CCccEEEEeCC
Q 021547          120 MEAVEIILTVITRLGAANILLPRPGWPFYES---FAKRNH--IEVRHFDLLPERGWEVDLEAVEALAD-ENTAAIVIINP  193 (311)
Q Consensus       120 ~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~---~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p  193 (311)
                      ++++.+++.+++++| |+|+++.|+|..+..   .....|  ..++.++.+  .++.+|++.|++.++ .+++++++++|
T Consensus        97 t~a~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~  173 (417)
T 3n0l_A           97 SQANQGVYAALINPG-DKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKEKPKLIVCGAS  173 (417)
T ss_dssp             HHHHHHHHHHHSCTT-CEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHHCCSEEEECCS
T ss_pred             HHHHHHHHHHhcCCC-CEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhcCCeEEEECCc
Confidence            799999999999999 999999999987544   333333  344555443  567799999999887 58999988887


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      +|  |..++   +++|.++|++||++||+|++|. ++.+.+..+..+.     ...|++.|+||.+  +|+|.||+++++
T Consensus       174 ~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~  241 (417)
T 3n0l_A          174 AY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTND  241 (417)
T ss_dssp             SC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESC
T ss_pred             cc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECC
Confidence            76  88888   9999999999999999999964 4444443332322     1238999999985  788999999864


Q ss_pred             CCCccchhhHHHHHhhhh
Q 021547          273 PNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~  290 (311)
                      +       ++++.+....
T Consensus       242 ~-------~~~~~~~~~~  252 (417)
T 3n0l_A          242 E-------ELAKKINSAI  252 (417)
T ss_dssp             H-------HHHHHHHHHH
T ss_pred             H-------HHHHHHhhhh
Confidence            3       3777776654

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.88  E-value=3.4e-21  Score=177.78  Aligned_cols=183  Identities=11%  Similarity=0.087  Sum_probs=141.2

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~  162 (311)
                      +...++++.++++++        .+++++++|+++|+.+++.+++++| |+|+++.+.|.+....+    +..|++++.+
T Consensus        82 p~~~~le~~lA~l~g--------~~~~i~~ssGt~Ai~~al~~l~~~G-d~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v  152 (415)
T 2fq6_A           82 LTHFSLQQAMCELEG--------GAGCVLFPCGAAAVANSILAFIEQG-DHVLMTNTAYEPSQDFCSKILSKLGVTTSWF  152 (415)
T ss_dssp             HHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTT-CEEEEETTSCHHHHHHHHHTGGGGTCEEEEE
T ss_pred             chHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCC-CEEEEeCCCchHHHHHHHHHHHHcCcEEEEE
Confidence            346779999999883        2457778899999999999999999 99999999999876543    4578998888


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH--hCCEEEEeccccCCccCCCCCCccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK--LGILVIADEVYGHLAFGSTPYIPMG  240 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~--~~~~li~D~ay~~~~~~~~~~~~~~  240 (311)
                      +..       |++++++++++++++|++++|+||+|.+++   +++|+++|++  +|+++|+|++|+...+ .   .++.
T Consensus       153 ~~~-------d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~-~---~p~~  218 (415)
T 2fq6_A          153 DPL-------IGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL-F---KALD  218 (415)
T ss_dssp             CTT-------CGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS-S---CGGG
T ss_pred             CCC-------CHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCccccc-C---Cccc
Confidence            642       889999999999999999999999999998   8999999999  9999999999986432 1   1221


Q ss_pred             ccCCCCCeEEEecCcccCCCCcce-eeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHH
Q 021547          241 VFGSIVPVITLGSISKRWIVPGWR-FGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCE  304 (311)
Q Consensus       241 ~~~~~~~~i~i~s~sK~~~~~G~r-~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~  304 (311)
                       +   +..+++.|+||.++.+|.+ .||+++++ +       ++++++.... .....+++.++.+
T Consensus       219 -~---g~Div~~S~sK~lg~~g~~~~G~l~~~~-~-------~~~~l~~~~~~~G~~~~~~~a~~~  272 (415)
T 2fq6_A          219 -F---GIDVSIQAATKYLVGHSDAMIGTAVCNA-R-------CWEQLRENAYLMGQMVDADTAYIT  272 (415)
T ss_dssp             -G---TCSEEEEETTTTTTCSSSCCCEEEEECT-T-------THHHHHHHHHHTTCCCCHHHHHHH
T ss_pred             -c---CCeEEEEeCccccCCCCCceEEEEEeCH-H-------HHHHHHHHHHhcCCCCCHHHHHHH
Confidence             2   2349999999999999866 58888653 2       4455554432 2334455544443

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.88  E-value=1.7e-22  Score=187.37  Aligned_cols=243  Identities=18%  Similarity=0.071  Sum_probs=161.6

Q ss_pred             CCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      +++.++||+.|.....  ++ .+|.+.+++.+++.......| +.....++++++++++.       ..++|++|+|+++
T Consensus        51 ~g~~ylD~~~~~~~~~--lG~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~-------~~~~v~~~~~Gse  120 (429)
T 3k28_A           51 DGNEYIDYVLSWGPLI--HGHANDRVVEALKAVAERGTSFGA-PTEIENKLAKLVIERVP-------SIEIVRMVNSGTE  120 (429)
T ss_dssp             TCCEEEESCGGGTTCT--TCBSCHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHHHST-------TCSEEEEESSHHH
T ss_pred             CCCEEEECCCChhhcc--cCCCCHHHHHHHHHHHhhCcCcCC-CCHHHHHHHHHHHHhCC-------CCCEEEEeCChHH
Confidence            5788999998853321  33 689999999999876443233 34456677777777762       4679999999999


Q ss_pred             HHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHH-cCcEEEEeeccCCCCcc------------cCHHHHHhhcCC--C
Q 021547          122 AVEIILTVITR--LGAANILLPRPGWPFYESFAKR-NHIEVRHFDLLPERGWE------------VDLEAVEALADE--N  184 (311)
Q Consensus       122 a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~------------~d~~~l~~~l~~--~  184 (311)
                      +++.++..+..  .+ ++|++..|+|.++...+.. .|.....+......+..            -|++.|++.++.  +
T Consensus       121 a~~~ai~~a~~~~~~-~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~  199 (429)
T 3k28_A          121 ATMSALRLARGYTGR-NKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGD  199 (429)
T ss_dssp             HHHHHHHHHHHHHTC-CEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHHHhhCC-CEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCC
Confidence            99999988764  45 8999999998765432221 22111111111001100            178899888762  2


Q ss_pred             ccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc
Q 021547          185 TAAIVIINP-CNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG  262 (311)
Q Consensus       185 ~~~i~i~~p-~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G  262 (311)
                      ..++++++| +|++|... +++.+++|.++|++||+++|+||+|.++ ..|.. .....+....+   +.++||.|++ |
T Consensus       200 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK~~~~-G  273 (429)
T 3k28_A          200 DIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYN-CGQGYYGVTPD---LTCLGKVIGG-G  273 (429)
T ss_dssp             GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTT-HHHHHHTCCCS---EEEECGGGGT-T
T ss_pred             CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hHHHHhCCCCc---eehhhhhhcC-C
Confidence            334455555 55666655 6788999999999999999999999987 55432 22222222222   3479999964 9


Q ss_pred             ceeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhhc
Q 021547          263 WRFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       263 ~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +|+||++++.        ++++.+...    ...++++++++|+++.+.|+.
T Consensus       274 ~~iG~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~  317 (429)
T 3k28_A          274 LPVGAYGGKA--------EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQ  317 (429)
T ss_dssp             SCCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHT
T ss_pred             CCeEEEEEcH--------HHHhhhccCCCccccCCCCCChHHHHHHHHHHHH
Confidence            9999998853        366666542    234578899999999888763

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.88  E-value=3.2e-22  Score=185.30  Aligned_cols=236  Identities=16%  Similarity=0.086  Sum_probs=159.8

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.++||+.|.+....+ ..+|.+.+++.+.+.....  |..   ..+.++.+++++.+.++   ..++|++|+|++++
T Consensus        50 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~--~~~---~~~~~~~la~~l~~~~~---~~~~v~~~~ggsea  120 (427)
T 3fq8_A           50 DGNRYIDYVGTWGPAICG-HAHPEVIEALKVAMEKGTS--FGA---PCALENVLAEMVNDAVP---SIEMVRFVNSGTEA  120 (427)
T ss_dssp             TSCEEEESSGGGTTCTTC-BTCHHHHHHHHHHHTTCSC--CSS---CCHHHHHHHHHHHHHST---TCSEEEEESSHHHH
T ss_pred             CCCEEEECCCchhhhccC-CCCHHHHHHHHHHHHhCCC--cCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence            478899999885432211 2689999999999875432  322   23566677777766555   56899999999999


Q ss_pred             HHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHc-Cc-------------------EEEEeeccCCCCcccCHHHHHhh
Q 021547          123 VEIILTVIT--RLGAANILLPRPGWPFYESFAKRN-HI-------------------EVRHFDLLPERGWEVDLEAVEAL  180 (311)
Q Consensus       123 ~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~-g~-------------------~~~~~~~~~~~~~~~d~~~l~~~  180 (311)
                      ++.++....  ..+ ++|++..|+|+++...+... +.                   .+..++.       -|+++|++.
T Consensus       121 ~~~al~~a~~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~  192 (427)
T 3fq8_A          121 CMAVLRIMRAYTGR-DKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-------NDLEAVKAL  192 (427)
T ss_dssp             HHHHHHHHHHHHCC-CEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred             HHHHHHHHHHhhCC-CEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-------CCHHHHHHH
Confidence            999985443  234 78999988987643322111 11                   1222221       188999988


Q ss_pred             cCC---CccEEEEeCCCCCCccCCC-HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcc
Q 021547          181 ADE---NTAAIVIINPCNPCGNVLT-YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISK  256 (311)
Q Consensus       181 l~~---~~~~i~i~~p~nptG~~~~-~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK  256 (311)
                      +++   +++++++..++|++|.+.+ .+.+++|.++|++||++||+||+|.++ +.|.. .....+....+   +.|+||
T Consensus       193 l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK  267 (427)
T 3fq8_A          193 FAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYG-GVQEKFGVTPD---LTTLGK  267 (427)
T ss_dssp             HHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTT-HHHHHTTCCCS---EEEECG
T ss_pred             HHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hhhHhcCCCCC---hhhhhh
Confidence            764   4555565556777887665 555999999999999999999999987 54432 12222222222   458899


Q ss_pred             cCCCCcceeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547          257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       257 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .++ +|+|+||++++.        ++++.+...    ...++++++++++++.+.|+
T Consensus       268 ~~~-~G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~  315 (427)
T 3fq8_A          268 IIG-GGLPVGAYGGKR--------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLE  315 (427)
T ss_dssp             GGG-TTSSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred             hhh-CCcceEEEEEcH--------HHHHhhccCCCccccCCCCcCHHHHHHHHHHHH
Confidence            998 799999998743        466666542    23356779999998887764

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.88  E-value=1.3e-21  Score=180.16  Aligned_cols=196  Identities=13%  Similarity=0.051  Sum_probs=143.0

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-----C---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA-----P---MFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~-----~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      ++.+.|+.+.+.     +.++.+.+++.+.+..... .+.     +   .....++++.+++++    |  .++++|++|
T Consensus        27 ~~~~yld~~~~~-----~~~~~v~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~   94 (416)
T 1qz9_A           27 EGVIYLDGNSLG-----ARPVAALARAQAVIAEEWG-NGLIRSWNSAGWRDLSERLGNRLATLI----G--ARDGEVVVT   94 (416)
T ss_dssp             TTCEECCTTTSC-----CCBTTHHHHHHHHHHTCCC-CCGGGHHHHTSGGGHHHHHHHHHHTTT----T--CCTTSEEEC
T ss_pred             CCeEeecCCCcC-----CCcHHHHHHHHHHHHHHHh-ccCccccchhhHHHHHHHHHHHHHHHc----C--CCcccEEEe
Confidence            567888887632     5678899999998864311 111     0   123345666666555    3  356799999


Q ss_pred             CChHHHHHHHHHHHh------cCCCCE-EEecCCCCcchHHH----HHHc--CcEEEEeeccCCCCcccCHHHHHhhcCC
Q 021547          117 LGCMEAVEIILTVIT------RLGAAN-ILLPRPGWPFYESF----AKRN--HIEVRHFDLLPERGWEVDLEAVEALADE  183 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~------~~g~d~-Vl~~~p~~~~~~~~----~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~  183 (311)
                      +|+++++..++.++.      ++| |+ |++..+.|+.+...    .+..  |.+++.++.         +++|++.+++
T Consensus        95 ~g~t~al~~al~~~~~~~~~~~~g-d~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~  164 (416)
T 1qz9_A           95 DTTSINLFKVLSAALRVQATRSPE-RRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQ  164 (416)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHSTT-CCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCST
T ss_pred             CChhHHHHHHHHhhcccccccCCC-CcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCC
Confidence            999999998888876      788 86 55556788765433    3333  888888764         6888888888


Q ss_pred             CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547          184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW  263 (311)
Q Consensus       184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~  263 (311)
                      +++++++++|+||||..++   +++|.++|+++|+++|+|++|+.    |.....+..+.   ..+++.|+||.+ .+|.
T Consensus       165 ~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~~~---~d~~~~s~~K~l-~~g~  233 (416)
T 1qz9_A          165 DTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSA----GAVPVDLHQAG---ADYAIGCTYKYL-NGGP  233 (416)
T ss_dssp             TEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT----TTSCCCHHHHT---CSEEEECSSSTT-CCCT
T ss_pred             CceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccc----cCcCCChhhcC---CCEEEecCcccC-CCCC
Confidence            9999999999999999999   89999999999999999999984    21112222222   348899999985 4577


Q ss_pred             ee-eEEEeeCC
Q 021547          264 RF-GWLATNDP  273 (311)
Q Consensus       264 r~-G~i~~~~~  273 (311)
                      ++ |++++++.
T Consensus       234 ~~~g~l~~~~~  244 (416)
T 1qz9_A          234 GSQAFVWVSPQ  244 (416)
T ss_dssp             TCCCEEEECTT
T ss_pred             CCeEEEEECHH
Confidence            77 99998653

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.88  E-value=6.5e-22  Score=183.61  Aligned_cols=234  Identities=16%  Similarity=0.067  Sum_probs=156.1

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.++||+.|.+....++ .+|.+.+++.+.+.......|.     .++++.+++++.+.++   ..++|++|+|+++|
T Consensus        54 ~g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~~~~~~-----~~~~~~l~~~la~~~~---~~~~v~~~~sgseA  124 (434)
T 2epj_A           54 DGARIVDLVLAYGPLILGH-KHPRVLEAVEEALARGWLYGAP-----GEAEVLLAEKILGYVK---RGGMIRFVNSGTEA  124 (434)
T ss_dssp             TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSSC-----CHHHHHHHHHHHHHHC---TTCEEEEESSHHHH
T ss_pred             CCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence            4678899988854322223 6899999999998764322332     2344444444444332   46799999999999


Q ss_pred             HHHHHHH---HhcCCCCEEEecCCCCcchHHHHH--------------HcCc------EEEEeeccCCCCcccCHHHHHh
Q 021547          123 VEIILTV---ITRLGAANILLPRPGWPFYESFAK--------------RNHI------EVRHFDLLPERGWEVDLEAVEA  179 (311)
Q Consensus       123 ~~~~~~~---l~~~g~d~Vl~~~p~~~~~~~~~~--------------~~g~------~~~~~~~~~~~~~~~d~~~l~~  179 (311)
                      +.++++.   +. .+ ++|++..|+|+++...+.              ..|+      .+..++.       .|++.|++
T Consensus       125 ~~~al~~ar~~~-~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~  195 (434)
T 2epj_A          125 TMTAIRLARGYT-GR-DLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALER  195 (434)
T ss_dssp             HHHHHHHHHHHH-CC-CEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHH
T ss_pred             HHHHHHHHHHhh-CC-CeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHH
Confidence            9999987   43 45 688888899986533221              1122      2333332       27899998


Q ss_pred             hcCC---CccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecC
Q 021547          180 LADE---NTAAIVIINP-CNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSI  254 (311)
Q Consensus       180 ~l~~---~~~~i~i~~p-~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~  254 (311)
                      .+++   ++++ ++++| +|++|.++ +++.+++|.++|++||+++|+||+|.++ ..|. ...+..+....+   +.|+
T Consensus       196 ~l~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~~~~d---i~s~  269 (434)
T 2epj_A          196 VFAEYGDRIAG-VIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGL-EGAQGYFNIEGD---IIVL  269 (434)
T ss_dssp             HHHHHGGGEEE-EEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSST-THHHHHHTCCCS---EEEE
T ss_pred             HHHhCCCCEEE-EEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCc-chhhHHhCCCCC---eeee
Confidence            8763   4444 55555 57899866 7999999999999999999999999977 3332 112222222223   3489


Q ss_pred             cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547          255 SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       255 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ||.++. |+|+||++++.        ++++.+...    ...+++.++++++++.+.|+
T Consensus       270 sK~l~~-G~~~G~v~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~  319 (434)
T 2epj_A          270 GKIIGG-GFPVGAVAGSR--------EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLK  319 (434)
T ss_dssp             EGGGGT-TSSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred             cchhcC-CcceeeeeecH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHH
Confidence            999876 99999999853        366665541    22356788999988877664

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.88  E-value=2.8e-22  Score=181.03  Aligned_cols=212  Identities=16%  Similarity=0.104  Sum_probs=150.3

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      .-..+.++.+..    .++++|.+.+++.+.+.   ...|.+..+..++++++++++..        +..++++|+++++
T Consensus        12 ~~~~~~~~~~~~----~~g~~p~v~~ai~~~~~---~~~~~~~~~~~~l~~~la~~~~~--------~~~i~~~~g~~a~   76 (359)
T 3pj0_A           12 KTPYKLGGNGPR----NVGVLTEALQNIDDNLE---SDIYGNGAVIEDFETKIAKILGK--------QSAVFFPSGTMAQ   76 (359)
T ss_dssp             TCSEESSSSSCC----BHHHHHHHTTTSCTTCB---CCBTTBSHHHHHHHHHHHHHHTC--------SEEEEESCHHHHH
T ss_pred             hcchhhcCCCcc----ccCCCHHHHHHHHhhcc---cCcccCCHHHHHHHHHHHHHhCC--------CcEEEeCCHHHHH
Confidence            345555555542    24567888888877443   23577767889999999999842        2335568888999


Q ss_pred             HHHHHHHhcCCCCE--EEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCC-
Q 021547          124 EIILTVITRLGAAN--ILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC-  197 (311)
Q Consensus       124 ~~~~~~l~~~g~d~--Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt-  197 (311)
                      .+++.+++.+| |+  |+++.+.|..+.   ......|.+++.++.   +++.+|++++++. .++++++++++|+||+ 
T Consensus        77 ~~a~~~~~~~g-~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~  151 (359)
T 3pj0_A           77 QIALRIWADRK-ENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIG  151 (359)
T ss_dssp             HHHHHHHHHHH-TCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGT
T ss_pred             HHHHHHHHhcC-CCcEEEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCC
Confidence            99999999888 76  555555554322   223567899888865   4568999999998 7789999999999988 


Q ss_pred             ccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc--cCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCC
Q 021547          198 GNVLTYQHLQKIAETARKLGILVIADEVYGHLA--FGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNG  275 (311)
Q Consensus       198 G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~--~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~  275 (311)
                      |.+++.+++++|+++|++||++||+|++|....  +.+.+...+.   ...+ +++.|+||.++.++.  ||++.+ +  
T Consensus       152 G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d-~~~~s~sK~~~~~~g--g~~~~~-~--  222 (359)
T 3pj0_A          152 GQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC---ALFD-SVYVSFYKGIGGIAG--AILAGN-D--  222 (359)
T ss_dssp             SBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCS-EEEEESSSTTCCSSC--EEEEEC-H--
T ss_pred             cccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh---ccCC-EEEEeccccCCCcce--EEEECC-H--
Confidence            799999999999999999999999999987533  2222222221   1112 556799998877632  666653 2  


Q ss_pred             ccchhhHHHHHhhh
Q 021547          276 VLQKSGIVGSIKAC  289 (311)
Q Consensus       276 ~~~~~~~~~~~~~~  289 (311)
                           +++++++..
T Consensus       223 -----~l~~~~~~~  231 (359)
T 3pj0_A          223 -----DFVQEAKIW  231 (359)
T ss_dssp             -----HHHHHHHHH
T ss_pred             -----HHHHHHHHH
Confidence                 477777654

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.88  E-value=2.9e-21  Score=181.45  Aligned_cols=204  Identities=18%  Similarity=0.160  Sum_probs=154.1

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .++.|+ +..     ....|.+.+++.+...  .++.|.+   ..|..++++.+++++.+.+|.+.   .+++++|++++
T Consensus        67 ~~~~lg-~~~-----~~~~p~v~~~~~~~~~--~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~---~~~~~~ggt~a  135 (474)
T 1wyu_B           67 TFYPLG-SCT-----MKYNPKLHEEAARLFA--DLHPYQDPRTAQGALRLMWELGEYLKALTGMDA---ITLEPAAGAHG  135 (474)
T ss_dssp             SCCCBT-TTC-----CCCCCHHHHHHHHTTS--SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE---EECCCSSHHHH
T ss_pred             Cccccc-ccc-----ccCCHHHHHHHHHHHH--hcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc---eeecChHHHHH
Confidence            567777 421     1223455666655422  2334543   55777888999999888777543   36788999999


Q ss_pred             HHHHHHHH----hcCCCC-----EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC
Q 021547          123 VEIILTVI----TRLGAA-----NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP  193 (311)
Q Consensus       123 ~~~~~~~l----~~~g~d-----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p  193 (311)
                      +..++.++    .++| |     +|+++.++|..+...++..|++++.++.+  .++.+|+++|++.++++++++++++|
T Consensus       136 ~~~al~~~~~~~~~~G-d~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~--~~~~~d~~~L~~~i~~~t~~v~~~~p  212 (474)
T 1wyu_B          136 ELTGILIIRAYHEDRG-EGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG--PEGEVDLEALKRELGPHVAALMLTNP  212 (474)
T ss_dssp             HHHHHHHHHHHHHHTT-CTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC--TTSSBCHHHHHHHCSTTEEEEEECSS
T ss_pred             HHHHHHHHHHHHHhcC-CccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCC--CCCCcCHHHHHHhhCCCceEEEEECC
Confidence            98766554    3577 7     99999999999999999999999999874  45789999999999989999999998


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC-c---ceeeEEE
Q 021547          194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP-G---WRFGWLA  269 (311)
Q Consensus       194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-G---~r~G~i~  269 (311)
                       ||+|.+.  +++++|.++|+++|+++|+|++|....++.   .....+   +..+++.|+||+|+.| |   .|+||++
T Consensus       213 -n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g~---~~~~~~---g~di~~~s~~K~~~~p~g~gG~~~G~~~  283 (474)
T 1wyu_B          213 -NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMGW---ARPGDM---GFDVVHLNLHKTFTVPHGGGGPGSGPVG  283 (474)
T ss_dssp             -CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTTT---CCHHHH---TCSEEECCTTTTTCCCCTTSCCCCCCEE
T ss_pred             -CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhccC---CCcccC---CCcEEEEeCccccccCCCCCCCCeEEEE
Confidence             6899883  249999999999999999999998655421   122222   2448889999999877 4   6999999


Q ss_pred             eeC
Q 021547          270 TND  272 (311)
Q Consensus       270 ~~~  272 (311)
                      +++
T Consensus       284 ~~~  286 (474)
T 1wyu_B          284 VKA  286 (474)
T ss_dssp             ECG
T ss_pred             EcH
Confidence            865

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.88  E-value=8.1e-22  Score=182.43  Aligned_cols=234  Identities=15%  Similarity=0.092  Sum_probs=159.4

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.+|||+.|.+....++ .+|.+.+++.+.+....  .|.   +..++++.+++++.+.++   ..++|++++|+++|
T Consensus        50 ~g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea  120 (424)
T 2e7u_A           50 DGNRYLDYVMSWGPLILGH-AHPKVLARVRETLERGL--TFG---APSPLEVALAKKVKRAYP---FVDLVRFVNSGTEA  120 (424)
T ss_dssp             TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCS--CCS---SCCHHHHHHHHHHHHHCT---TCCEEEEESSHHHH
T ss_pred             CCCEEEEccccccccccCC-CCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence            4677899998753322233 68999999999987642  232   234566666666666554   46899999999999


Q ss_pred             HHHHHHH---HhcCCCCEEEecCCCCcchHHHHHH--------------cCc------EEEEeeccCCCCcccCHHHHHh
Q 021547          123 VEIILTV---ITRLGAANILLPRPGWPFYESFAKR--------------NHI------EVRHFDLLPERGWEVDLEAVEA  179 (311)
Q Consensus       123 ~~~~~~~---l~~~g~d~Vl~~~p~~~~~~~~~~~--------------~g~------~~~~~~~~~~~~~~~d~~~l~~  179 (311)
                      +..+++.   +. .+ +.|++..|+|+++...+..              .|+      ++..++.       .|++.|++
T Consensus       121 ~~~al~~ar~~~-~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~  191 (424)
T 2e7u_A          121 TMSALRLARGYT-GR-PYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLRE  191 (424)
T ss_dssp             HHHHHHHHHHHH-CC-CEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHH
T ss_pred             HHHHHHHHHHhh-CC-CEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHH
Confidence            9999886   43 45 6899999999875432211              121      2333332       37899988


Q ss_pred             hcCC--CccEEEEeCCCC-CCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCc
Q 021547          180 LADE--NTAAIVIINPCN-PCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSIS  255 (311)
Q Consensus       180 ~l~~--~~~~i~i~~p~n-ptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~s  255 (311)
                      .+++  +..++++++|+| ++|.++ +++.+++|.++ ++||++||+||+|.++ ..|.. ..+..+....++   .|+|
T Consensus       192 ~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~di---~s~s  265 (424)
T 2e7u_A          192 VLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG-GATELLGLKPDL---VTLG  265 (424)
T ss_dssp             HHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT-HHHHHHTCCCSE---EEEC
T ss_pred             HHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh-HHHHHhCCCcch---hhhh
Confidence            8763  334566667765 489765 79999999999 9999999999999987 33422 122222222233   3999


Q ss_pred             ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547          256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |.++. |+|+||+++++        ++++.+...    ...+++.|+++|+++.+.|+
T Consensus       266 K~l~~-G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~  314 (424)
T 2e7u_A          266 KILGG-GLPAAAYAGRR--------EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLE  314 (424)
T ss_dssp             GGGGT-TSSCEEEEECH--------HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHH
T ss_pred             hhhhC-CcceEEEEEcH--------HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHH
Confidence            99984 99999999853        366666541    22356788999988877664

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.88  E-value=1.2e-21  Score=183.96  Aligned_cols=251  Identities=14%  Similarity=0.076  Sum_probs=170.6

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.+|||..|......+ ..+|.+.+++.+++..... .|....+..+.+..+++.+.+..+  ...++|++++|+++
T Consensus        52 ~~G~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGse  127 (472)
T 3hmu_A           52 SEGEEILDAMAGLWCVNIG-YGRDELAEVAARQMRELPY-YNTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGSE  127 (472)
T ss_dssp             TTCCEEECTTHHHHTCTTC-BCCHHHHHHHHHHHHHCSC-CCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHHH
T ss_pred             CCCCEEEECCCchhhccCC-CCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHHH
Confidence            3578899998772211112 2589999999999875432 233333445666677777766544  34579999999999


Q ss_pred             HHHHHHHHHhc-------CCCCEEEecCCCCcchHHHHHHcCc------------EEEEeeccC--C-CCcccC------
Q 021547          122 AVEIILTVITR-------LGAANILLPRPGWPFYESFAKRNHI------------EVRHFDLLP--E-RGWEVD------  173 (311)
Q Consensus       122 a~~~~~~~l~~-------~g~d~Vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~d------  173 (311)
                      |++.+++.+..       +|.++|++..+.|.++...+...+.            .+..++...  . .++ .+      
T Consensus       128 A~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~  206 (472)
T 3hmu_A          128 ANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGL  206 (472)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHH
Confidence            99999999875       3438999999999987654444332            233443211  0 111 23      


Q ss_pred             --HHHHHhhcC----CCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCC
Q 021547          174 --LEAVEALAD----ENTAAIVIINPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIV  246 (311)
Q Consensus       174 --~~~l~~~l~----~~~~~i~i~~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~  246 (311)
                        ++.|++.++    ++++++++..+++++|.+. +++.+++|.++|++||+++|+||+|.++...|. ......+...+
T Consensus       207 ~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~-~~a~~~~~v~p  285 (472)
T 3hmu_A          207 ARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGN-WFGTQTMGIRP  285 (472)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SCHHHHHTCCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCc-cchhHHhCCCC
Confidence              677888775    3444445445567777755 888899999999999999999999998766653 22223333333


Q ss_pred             CeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhh---hhccccCCCchhHHHHHhhhh
Q 021547          247 PVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKA---CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       247 ~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +++   ++||.++..|+|+||++++.        ++++.+..   ....+++.++++|+++.+.|+
T Consensus       286 di~---t~sK~l~gg~~plG~v~~~~--------~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~  340 (472)
T 3hmu_A          286 HIM---TIAKGLSSGYAPIGGSIVCD--------EVAHVIGKDEFNHGYTYSGHPVAAAVALENLR  340 (472)
T ss_dssp             SEE---EECGGGTTTSSCCEEEEEEH--------HHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHH
T ss_pred             cee---eechhhhcCCcceEEEEECH--------HHHHhcccCCccccCCCCCCHHHHHHHHHHHH
Confidence            344   68899877669999999853        47777732   133467889999999988775

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.87  E-value=1.6e-21  Score=177.89  Aligned_cols=198  Identities=16%  Similarity=0.182  Sum_probs=152.8

Q ss_pred             CCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHH-HHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCE
Q 021547           60 CFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAV-AEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAAN  137 (311)
Q Consensus        60 ~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i-a~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~  137 (311)
                      .+++++.+.+++.+.+.++.+..|.  ....++++++ +++++       ..+++++++|+++++.+++.++ +++| |+
T Consensus        11 ~~~~~~~i~~a~~~~~~~~~~~~~~--~~~~~l~~~~~a~~~g-------~~~~~v~~~sgt~al~~al~~l~~~~G-d~   80 (377)
T 3ju7_A           11 STVPVIEYLDELKEIDASHIYTNYG--PINQRFEQTIMSGFFQ-------NRGAVTTVANATLGLMAAIQLKKRKKG-KY   80 (377)
T ss_dssp             CCCCGGGGHHHHHHHHHHTCCSSSC--HHHHHHHHHHHHHTST-------TCSEEEEESCHHHHHHHHHHHHSCTTC-CE
T ss_pred             CCCCcHHHHHHHHHHHHcCCcccCC--HHHHHHHHHHHHHHhC-------CCCeEEEeCCHHHHHHHHHHHcCCCCc-CE
Confidence            4788899999999998876432233  3578999999 99883       1467899999999999999998 8999 99


Q ss_pred             EEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc-CCC--ccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547          138 ILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA-DEN--TAAIVIINPCNPCGNVLTYQHLQKIAETAR  214 (311)
Q Consensus       138 Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~--~~~i~i~~p~nptG~~~~~~~l~~l~~l~~  214 (311)
                      |+++.|+|..+...++..|++++.+++++ +++.+|++++++.+ +++  +++++   |+||+|...+   +++|.++|+
T Consensus        81 Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~la~  153 (377)
T 3ju7_A           81 ALMPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEELEK  153 (377)
T ss_dssp             EEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHHHH
T ss_pred             EEECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHHHh
Confidence            99999999999999999999999998753 46789999999987 556  77776   6788999988   888999999


Q ss_pred             HhCCEEEEeccccCCc-cCCCCCCcccccCCCCCeEEEecC--cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547          215 KLGILVIADEVYGHLA-FGSTPYIPMGVFGSIVPVITLGSI--SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       215 ~~~~~li~D~ay~~~~-~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  290 (311)
                       +|++||+|++|+... +.+.+..  ..+.    .+.+.||  +|.++. | +.|+++++++       ++.++++...
T Consensus       154 -~~~~vi~D~a~a~g~~~~~~~~g--~~~~----d~~~~S~~~~K~l~~-g-~gG~~~~~~~-------~l~~~~~~~~  216 (377)
T 3ju7_A          154 -KGVPVVVDAAPGFGLMNGGMHYG--QDFS----GMIIYSFHATKPFGI-G-EGGLIYSKNE-------EDIQRIKRMG  216 (377)
T ss_dssp             -TTCCBEEECTTCTTCEETTEETT--TTCS----SEEEEECBTTSSSCC-B-SCEEEEESCH-------HHHHHHHHHT
T ss_pred             -cCCEEEEECCCccCCeECCEecc--CCCC----cEEEEECCCCCcCCC-C-CcEEEEECCH-------HHHHHHHHHH
Confidence             999999999998532 2222110  1111    1555564  698775 5 6788887653       4667766653

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.87  E-value=9.8e-23  Score=184.04  Aligned_cols=197  Identities=12%  Similarity=0.016  Sum_probs=140.0

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS---MFNCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~---~~~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      .+++|+.|.      .++|+.+++++.+.+...   ....|..   ..+..++.+.+.+++.+.+|.. .+++|++|+|+
T Consensus         3 ~~~~~~~g~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~~~v~~~~g~   75 (360)
T 1w23_A            3 QVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQGG   75 (360)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSH
T ss_pred             ceEeecCCC------cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEECCc
Confidence            467888775      367899999999887531   0111211   2233334444444444444443 35789999999


Q ss_pred             -HHHHHHHHHHHhcC---CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHh-hcCCCccEEEEeCCC
Q 021547          120 -MEAVEIILTVITRL---GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEA-LADENTAAIVIINPC  194 (311)
Q Consensus       120 -~~a~~~~~~~l~~~---g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~l~~~~~~i~i~~p~  194 (311)
                       ++++.+++.+++.+   | |.|+++.++|..+ ..++..| +++.++++++++ .+|++++++ .++++++++++++|+
T Consensus        76 gt~al~~~~~~l~~~~~~g-~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~~~k~v~~~~~~  151 (360)
T 1w23_A           76 ASLQFTMLPMNLLTKGTIG-NYVLTGSWSEKAL-KEAKLLG-ETHIAASTKANS-YQSIPDFSEFQLNENDAYLHITSNN  151 (360)
T ss_dssp             HHHHHHHHHHHHCCTTCEE-EEEECSHHHHHHH-HHHHTTS-EEEEEEECGGGT-SCSCCCGGGCCCCTTEEEEEEESEE
T ss_pred             chHHHHHHHHHhcCCCCcc-cEEEecchhHHHH-HHHHHhC-CeEEeecccccC-cCCccchHhhccCCCCCEEEEeCCC
Confidence             99999999999865   5 6777777776543 4467789 999998754333 478899998 888899999999999


Q ss_pred             CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      ||||.+++  ++.      +++|+++|+|++|+.+..    ...+..+     .++++|+||.|+.+|  +||+++++
T Consensus       152 nptG~~~~--~i~------~~~~~~li~D~a~~~~~~----~~~~~~~-----di~~~s~sK~~~~~G--~G~~~~~~  210 (360)
T 1w23_A          152 TIYGTQYQ--NFP------EINHAPLIADMSSDILSR----PLKVNQF-----GMIYAGAQKNLGPSG--VTVVIVKK  210 (360)
T ss_dssp             TTTTEECS--SCC------CCCSSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTSCTT--CEEEEEEH
T ss_pred             CCcceecc--ccc------ccCCceEEEechhhcCCC----CcCcccC-----CEEEEEcccccCCCC--cEEEEEcH
Confidence            99999987  333      279999999999986432    1233333     288999999998666  99999864

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.87  E-value=6.6e-22  Score=178.57  Aligned_cols=181  Identities=14%  Similarity=0.092  Sum_probs=133.5

Q ss_pred             CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCC--EEEecCCCCcchHH---HHHHc
Q 021547           81 NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAA--NILLPRPGWPFYES---FAKRN  155 (311)
Q Consensus        81 ~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d--~Vl~~~p~~~~~~~---~~~~~  155 (311)
                      ..|++..+..++++++++++..        +..++++|+++++.+++.+++.+| |  .|+++.+.|..+..   .....
T Consensus        41 ~~y~~~~~~~~l~~~la~~~~~--------~~~i~~~~G~~a~~~al~~~~~~g-d~~~vi~~~~~~~~~~~~~~~~~~~  111 (357)
T 3lws_A           41 DQYGTGAIIEPFEQKFADVLGM--------DDAVFFPSGTMAQQVALRIWSDET-DNRTVAYHPLCHLEIHEQDGLKELH  111 (357)
T ss_dssp             EETTEETTHHHHHHHHHHHHTC--------SEEEEESCHHHHHHHHHHHHHHHH-TCCEEEECTTCHHHHSSTTHHHHHS
T ss_pred             ccccCChHHHHHHHHHHHHhCC--------CcEEEecCcHHHHHHHHHHHhhcC-CCcEEEecccceeeeeccchhhhcc
Confidence            3577777899999999999942        334555778889999999999888 7  67777776554322   45667


Q ss_pred             CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHhCCEEEEeccccC--CccC
Q 021547          156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC-GNVLTYQHLQKIAETARKLGILVIADEVYGH--LAFG  232 (311)
Q Consensus       156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt-G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~--~~~~  232 (311)
                      |.+++.++.   +++.+|++++++..  +++++++++|+||| |.+++.+++++|+++|++||++||+|++|..  ..+.
T Consensus       112 g~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~  186 (357)
T 3lws_A          112 PIETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYY  186 (357)
T ss_dssp             SCEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHH
T ss_pred             CcEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhc
Confidence            888888763   34579999999974  38999999999998 9999999999999999999999999999872  1122


Q ss_pred             CCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547          233 STPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       233 ~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      +.+...+.   ...+ +++.|+||.|+.++.  ||++.+.        ++++.++..
T Consensus       187 ~~~~~~~~---~~~d-~~~~s~sK~~~~~~g--g~~~~~~--------~~~~~~~~~  229 (357)
T 3lws_A          187 EKTAAEIA---GLFD-SIYISFYKGLGGIAG--AILAGPA--------AFCQTARIW  229 (357)
T ss_dssp             TCCHHHHH---TTSS-EEEEESSSTTCCSSC--EEEEECH--------HHHHHHHHH
T ss_pred             CCChHHHH---hcCC-EEEEeccccCCCCce--EEEEcCH--------HHHHHHHHH
Confidence            22222221   1112 458899999844432  8887642        467776654

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.87  E-value=5.4e-21  Score=177.10  Aligned_cols=158  Identities=19%  Similarity=0.138  Sum_probs=131.7

Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCcEEEEe
Q 021547           87 FGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRNHIEVRHF  162 (311)
Q Consensus        87 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~~  162 (311)
                      +...++++.+++++.        .+..++++++++|+.+++.+++++| |+|+++.|.|.++..    .++..|++++.+
T Consensus        82 p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~al~~~G-d~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v  152 (430)
T 3ri6_A           82 PTVEDLEQRLKNLTG--------ALGVLALGSGMAAISTAILTLARAG-DSVVTTDRLFGHTLSLFQKTLPSFGIEVRFV  152 (430)
T ss_dssp             HHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHCCTT-CEEEEETTCCHHHHHHHHTHHHHTTCEEEEE
T ss_pred             HHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHhCCC-CEEEEcCCCchhHHHHHHHHHHHcCCEEEEe
Confidence            456788888888883        2346677777899999999999999 999999999998776    677899999998


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      +..       |++.+++++++++++|++++|+||+|.+++   +++|.++|+++|+++|+|++|+...+    ..+. . 
T Consensus       153 ~~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~----~~~~-~-  216 (430)
T 3ri6_A          153 DVM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYL----LEAK-R-  216 (430)
T ss_dssp             CTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTT----CCGG-G-
T ss_pred             CCC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CChH-H-
Confidence            763       899999999999999999999999999998   88999999999999999999986432    1111 1 


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                        .+..+++.|+||.++.+|..+|.+++.
T Consensus       217 --~g~div~~S~sK~l~g~g~~~gG~vv~  243 (430)
T 3ri6_A          217 --LGVDIEVLSSTKFISGGGTSVGGVLID  243 (430)
T ss_dssp             --GTCSEEEEECCCEEETTEEECCEEEEE
T ss_pred             --cCCEEEEECCcccccCCCCceEEEEEE
Confidence              123489999999999888777777764

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.87  E-value=4.8e-21  Score=176.17  Aligned_cols=195  Identities=19%  Similarity=0.159  Sum_probs=149.2

Q ss_pred             HHHHHHHHHHHhc----C--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE---eCChHHHHHHHHHHHhcCCC
Q 021547           65 AVAEDAIVDSVRS----S--MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI---TLGCMEAVEIILTVITRLGA  135 (311)
Q Consensus        65 ~~~~~a~~~~~~~----~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~---t~g~~~a~~~~~~~l~~~g~  135 (311)
                      ..+.++|.+....    +  ....|+. .+..+|++.++++++        .+..++   ++|+++|+..++.+++++| 
T Consensus        32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~-~~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~~G-  101 (409)
T 3jzl_A           32 AKVLDAFQENKVSDFHFHPSTGYGYDD-EGRDTLERVYATVFK--------TEAALVRPQIISGTHAISTVLFGILRPD-  101 (409)
T ss_dssp             HHHHHHHHHTTCCGGGGCCCCTTCTTC-HHHHHHHHHHHHHHT--------CSEEEEETTSCSHHHHHHHHHHHHCCTT-
T ss_pred             HHHHHHHHHhhhhhhccCCCcCCCCCh-hHHHHHHHHHHHHhC--------CCcEEEECCCccHHHHHHHHHHHhcCCC-
Confidence            3466777665321    1  1223444 367889999999883        344555   8899999999999999999 


Q ss_pred             CEEEecC-CCCcchHH----------HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC----CCCCCccC
Q 021547          136 ANILLPR-PGWPFYES----------FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN----PCNPCGNV  200 (311)
Q Consensus       136 d~Vl~~~-p~~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~----p~nptG~~  200 (311)
                      |+|+++. +.|..+..          .++..|++++.++++  .++.+|++.+++.++++++++++++    |+||||.+
T Consensus       102 D~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~--~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v  179 (409)
T 3jzl_A          102 DELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLL--ENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTI  179 (409)
T ss_dssp             CEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCC--TTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH
T ss_pred             CEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCC--CCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcc
Confidence            9999998 99998874          346778999988864  3567999999999999999999999    99999876


Q ss_pred             CCHHHHHHHHHHHHH--hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCcc
Q 021547          201 LTYQHLQKIAETARK--LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVL  277 (311)
Q Consensus       201 ~~~~~l~~l~~l~~~--~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~  277 (311)
                      .   ++++|+++|++  +|+++++|++|+.+.+...+ ..   .   +..++++|+||.++.+| .+.||++++.     
T Consensus       180 ~---~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p-~~---~---g~Div~~S~sK~lgg~~~~~GG~v~~~~-----  244 (409)
T 3jzl_A          180 E---KIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP-PE---V---GADIIAGSLIKNPGGGLAKTGGYIAGKE-----  244 (409)
T ss_dssp             H---HHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS-GG---G---TCSEEEEETTSGGGTTTCSSCEEEEECH-----
T ss_pred             c---cHHHHHHHHHhhCCCCEEEEeCCcccccccCCc-cc---c---CCeEEEECccccCCccCCceEEEEEeCH-----
Confidence            4   59999999999  99999999999976543221 11   1   23499999999998777 4468888742     


Q ss_pred             chhhHHHHHhhh
Q 021547          278 QKSGIVGSIKAC  289 (311)
Q Consensus       278 ~~~~~~~~~~~~  289 (311)
                         +++++++..
T Consensus       245 ---~li~~l~~~  253 (409)
T 3jzl_A          245 ---ALVDLCGYR  253 (409)
T ss_dssp             ---HHHHHHHHH
T ss_pred             ---HHHHHHHHH
Confidence               477777764

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.87  E-value=7.4e-21  Score=176.82  Aligned_cols=186  Identities=13%  Similarity=0.116  Sum_probs=141.6

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~~  163 (311)
                      ...++|++++++++      .. +.+++ ++|++++..++.+++++| |+|+++.+.|.++...    ++..|++++.++
T Consensus       115 ~~~~l~~~lA~l~g------~~-~~v~~-~sG~~Ai~~al~~l~~~G-d~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~  185 (445)
T 1qgn_A          115 TTVVLEEKISALEG------AE-STLLM-ASGMCASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETILPKMGITATVID  185 (445)
T ss_dssp             HHHHHHHHHHHHHT------CS-EEEEE-SCHHHHHHHHHHHHSCSS-CEEEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred             HHHHHHHHHHHHhC------CC-cEEEe-CCHHHHHHHHHHHHhCCC-CEEEEcCCCchhHHHHHHHHHHHcCCEEEEeC
Confidence            45688999998883      22 34444 555699999999999999 9999999999987653    566899999887


Q ss_pred             ccCCCCcccCHHHHHhhcCCCc-cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          164 LLPERGWEVDLEAVEALADENT-AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~-~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      ..       |++.+++.+++++ +++++++|+||||.+.+   +++|.++|+++|+++|+|++|....+.    .++ . 
T Consensus       186 ~~-------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~----~~~-~-  249 (445)
T 1qgn_A          186 PA-------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ----KAL-A-  249 (445)
T ss_dssp             SS-------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CTT-T-
T ss_pred             CC-------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc-c-
Confidence            52       8899999998888 99999999999999998   899999999999999999999864321    111 1 


Q ss_pred             CCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhh
Q 021547          243 GSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  308 (311)
                        .+..++++|+||.++.+| .++||+++++        ++++++..... .....+++..+++.+.+
T Consensus       250 --~g~Div~~S~sK~~gg~gd~~~G~l~~~~--------~l~~~l~~~~~~~g~~~~~~~a~~~~~~l  307 (445)
T 1qgn_A          250 --LGADLVLHSATKFLGGHNDVLAGCISGPL--------KLVSEIRNLHHILGGALNPNAAYLIIRGM  307 (445)
T ss_dssp             --TTCSEEEECTTTTTTCSSSCCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHG
T ss_pred             --cCCEEEEECCcccccccccceEEEEEECH--------HHHHHHHHHHHHhCCCCCHHHHHHHHHhH
Confidence              223489999999988776 5899998853        36676665533 33345666555544443

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.87  E-value=3.3e-21  Score=177.94  Aligned_cols=195  Identities=17%  Similarity=0.138  Sum_probs=148.0

Q ss_pred             HHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE---eCChHHHHHHHHHHHhcCCC
Q 021547           65 AVAEDAIVDSVRS------SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI---TLGCMEAVEIILTVITRLGA  135 (311)
Q Consensus        65 ~~~~~a~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~---t~g~~~a~~~~~~~l~~~g~  135 (311)
                      +.++++|.+....      .....|+. .|..++++.++++++        .+..++   ++|+++|+..++.+++++| 
T Consensus        46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~-~~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~pG-  115 (427)
T 3i16_A           46 LKVLNAFQEERISEAHFTNSSGYGYGD-IGRDSLDAVYARVFN--------TESALVRPHFVNGTHALGAALFGNLRPG-  115 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTC-HHHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHHCCTT-
T ss_pred             HHHHHHHHHhchhHHhcCCCCCCCCCH-HHHHHHHHHHHHHhC--------CcceEEeCCCccHHHHHHHHHHHHhCCC-
Confidence            3566777654211      11123444 367889999999884        233455   7888999999999999999 


Q ss_pred             CEEEecC-CCCcchHH-----------HHHHcCcEEEEeeccCCCCcccCHHHHHhhcC--CCccEEEEeC----CCCCC
Q 021547          136 ANILLPR-PGWPFYES-----------FAKRNHIEVRHFDLLPERGWEVDLEAVEALAD--ENTAAIVIIN----PCNPC  197 (311)
Q Consensus       136 d~Vl~~~-p~~~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~----p~npt  197 (311)
                      |+|+++. |.|..+..           .++..|++++.+++.  .++.+|++.+++.++  +++++|++++    |+||+
T Consensus       116 D~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~--~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~npt  193 (427)
T 3i16_A          116 NTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLK--EDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRA  193 (427)
T ss_dssp             CEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCC--TTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCC
T ss_pred             CEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCc--cCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCc
Confidence            9999999 99998763           346678999988864  345789999999988  7899999999    89999


Q ss_pred             ccCCCHHHHHHHHHHHHH--hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCC
Q 021547          198 GNVLTYQHLQKIAETARK--LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPN  274 (311)
Q Consensus       198 G~~~~~~~l~~l~~l~~~--~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~  274 (311)
                      |.+   .++++|+++|++  +|+++++|++|+.+.+...+   .. .   +..|+++|+||.++.+| .+.||++++.  
T Consensus       194 g~i---~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p---~~-~---gaDiv~~S~sK~lgg~g~~~gG~i~~~~--  261 (427)
T 3i16_A          194 LLI---EDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEP---TD-V---GADLIAGSLIKNIGGGIAPTGGYLAGTK--  261 (427)
T ss_dssp             CCH---HHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCG---GG-G---TCSEEEEETTSGGGTTTCCSCEEEEECH--
T ss_pred             ccH---HHHHHHHHHHHHhCCCCEEEEECCCccccccCCc---cc-c---CCeEEEecCcccCCCCCCceEEEEEECH--
Confidence            866   569999999999  99999999999976543221   11 1   22499999999988777 6678988742  


Q ss_pred             CccchhhHHHHHhhh
Q 021547          275 GVLQKSGIVGSIKAC  289 (311)
Q Consensus       275 ~~~~~~~~~~~~~~~  289 (311)
                            +++++++..
T Consensus       262 ------~li~~l~~~  270 (427)
T 3i16_A          262 ------DCIEKTSYR  270 (427)
T ss_dssp             ------HHHHHHHHH
T ss_pred             ------HHHHHHHHh
Confidence                  478888764

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.87  E-value=4.6e-22  Score=180.06  Aligned_cols=223  Identities=10%  Similarity=0.016  Sum_probs=153.5

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-C-EEE
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM--------FNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-D-IYI  115 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~-v~~  115 (311)
                      .++.++.|.      .++++.+++++.+.+....        ..+|.  .+..++++.+.+.+.+.+|.  ..+ + +++
T Consensus         4 ~~~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~g~--~~~~~~i~~   73 (362)
T 2c0r_A            4 RAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRG--AVYEAVHNEAQARLLALLGN--PTGYKVLFI   73 (362)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTS--HHHHHHHHHHHHHHHHHTTC--CSSEEEEEE
T ss_pred             ceeeccCCC------CCCCHHHHHHHHHHHhhhhhcCccccccCCCc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Confidence            456666663      5788999999998874310        11121  23455677777777776664  332 5 577


Q ss_pred             eCChHHHHHHHHHHHhcCCCCEEEecCCCCcch--HHHHHHcCcEEEEeeccCCCCc--ccCHHHHHhhcCCCccEEEEe
Q 021547          116 TLGCMEAVEIILTVITRLGAANILLPRPGWPFY--ESFAKRNHIEVRHFDLLPERGW--EVDLEAVEALADENTAAIVII  191 (311)
Q Consensus       116 t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~--~~d~~~l~~~l~~~~~~i~i~  191 (311)
                      |+|+++++..++.+++++| |+|++..+.+...  ...++..| +++.++...+.++  .+|.++++  +++++++++++
T Consensus        74 t~g~t~a~~~~~~~l~~~g-d~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~  149 (362)
T 2c0r_A           74 QGGASTQFAMIPMNFLKEG-QTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLT  149 (362)
T ss_dssp             SSHHHHHHHHHHHHHCCTT-CEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEE
T ss_pred             CCCchHHHHHHHHhcCCCC-CeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEe
Confidence            8999999999999999999 9999887665442  46677789 9999887532222  34655544  67789999999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      +|+||||..++  ++++|      +|+++|+|++|+...    .+..+..+     .+++.|+||+|+++|  +||++++
T Consensus       150 ~~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~----~~~~~~~~-----d~~~~s~~K~~g~~G--~G~l~~~  210 (362)
T 2c0r_A          150 SNETIEGAQFK--AFPDT------GSVPLIGDMSSDILS----RPFDLNQF-----GLVYAGAQKNLGPSG--VTVVIVR  210 (362)
T ss_dssp             SEETTTTEECS--SCCCC------TTSCEEEECTTTTTS----SCCCGGGC-----SEEEEETTTTTCCSS--CEEEEEE
T ss_pred             CCcCccceecc--ccccc------CCCEEEEEChhhccC----CccchhHC-----cEEEEeccccccCcC--cEEEEEc
Confidence            99999999754  35555      799999999998643    12223222     288889999999888  9999986


Q ss_pred             CCCCccchhhHHHHHhh-------------hhccccCCCchhHHHHHhhhh
Q 021547          272 DPNGVLQKSGIVGSIKA-------------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       272 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ..        +++.++.             .....++++.++|+++.+.|+
T Consensus       211 ~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~  253 (362)
T 2c0r_A          211 ED--------LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLK  253 (362)
T ss_dssp             GG--------GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHH
T ss_pred             HH--------HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHH
Confidence            53        2222211             112235677788888877764

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.87  E-value=4.3e-21  Score=177.22  Aligned_cols=194  Identities=16%  Similarity=0.156  Sum_probs=148.6

Q ss_pred             HHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE---eCChHHHHHHHHHHHhcCCC
Q 021547           65 AVAEDAIVDSVRS------SMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI---TLGCMEAVEIILTVITRLGA  135 (311)
Q Consensus        65 ~~~~~a~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~---t~g~~~a~~~~~~~l~~~g~  135 (311)
                      +.|.+++.+....      .....|+.. |..++++.++++++        .+..++   ++|+++|+.+++.+++++| 
T Consensus        47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-g~~~Le~~lA~l~g--------~e~alv~p~~~sGt~A~~~al~all~pG-  116 (427)
T 3hvy_A           47 LKVLKAFQEERISESHFTNSSGYGYNDI-GRDSLDRVYANIFN--------TESAFVRPHFVNGTHAIGAALFGNLRPN-  116 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTCH-HHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHTCCTT-
T ss_pred             HHHHHHHHHHHHHHHhcccCcCCCCCch-hHHHHHHHHHHHhC--------CCceEEeCCCCcHHHHHHHHHHHhcCCC-
Confidence            4677777765321      112245443 67889999999883        344566   7888999999999999999 


Q ss_pred             CEEEecC-CCCcchH-----------HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC--CCccEEEEeC----CCCCC
Q 021547          136 ANILLPR-PGWPFYE-----------SFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD--ENTAAIVIIN----PCNPC  197 (311)
Q Consensus       136 d~Vl~~~-p~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~----p~npt  197 (311)
                      |+|++++ |.|..+.           ..++..|++++.++.   +++.+|++.++++++  +++++|++++    |+|||
T Consensus       117 D~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~npt  193 (427)
T 3hvy_A          117 DTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKS  193 (427)
T ss_dssp             CEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCC
T ss_pred             CEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCcc
Confidence            9999998 9998876           334667999998876   456899999999998  8999999999    89999


Q ss_pred             ccCCCHHHHHHHHHHHHH--hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCC
Q 021547          198 GNVLTYQHLQKIAETARK--LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPN  274 (311)
Q Consensus       198 G~~~~~~~l~~l~~l~~~--~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~  274 (311)
                      |.+   .++++|+++|++  +|+++++|++|+.+.+...+   +. .   +..|+++|+||.++.+| .+.||++++.  
T Consensus       194 g~v---~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p---~~-~---gaDiv~~S~sK~lgg~g~~~GG~i~~~~--  261 (427)
T 3hvy_A          194 LRI---AEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEP---TD-V---GADIIAGSLIKNIGGGIATTGGYIAGKE--  261 (427)
T ss_dssp             CCH---HHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCG---GG-G---TCSEEEEETTSGGGTTTCCSCEEEEECH--
T ss_pred             ccH---HHHHHHHHHHHHhCCCCEEEEECCccccccCCCC---cc-c---CCeEEEECCcccccccccceEEEEEECH--
Confidence            765   569999999999  89999999999876543222   11 1   12399999999988766 4568887642  


Q ss_pred             CccchhhHHHHHhhh
Q 021547          275 GVLQKSGIVGSIKAC  289 (311)
Q Consensus       275 ~~~~~~~~~~~~~~~  289 (311)
                            +++++++..
T Consensus       262 ------~li~~l~~~  270 (427)
T 3hvy_A          262 ------EYVTQATFR  270 (427)
T ss_dssp             ------HHHHHHHHH
T ss_pred             ------HHHHHHHHH
Confidence                  478887764

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.87  E-value=1.4e-21  Score=183.99  Aligned_cols=221  Identities=12%  Similarity=0.008  Sum_probs=157.9

Q ss_pred             hHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCcHHHHHHHHHHH
Q 021547           27 AFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC------YAPMFGLPLARRAVAEYL  100 (311)
Q Consensus        27 ~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~l  100 (311)
                      .+..++....++     ..+.|+|..+.      .++++.+++++.+.+.+....+      |....+..++++.+.+++
T Consensus        31 ~~~~~~~~~~~~-----~~~~i~L~a~e------~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~   99 (483)
T 1rv3_A           31 EVYDIIKKESNR-----QRVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRA   99 (483)
T ss_dssp             HHHHHHHHHHHH-----HHSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-----hhcCeEEEcCC------CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHH
Confidence            455555443222     24679997665      2468999999988876422112      333334578888888888


Q ss_pred             hhcCCCCCCC--CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH--------HHHHcC--cEEEEeeccCCC
Q 021547          101 NRDLPYKLSA--DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES--------FAKRNH--IEVRHFDLLPER  168 (311)
Q Consensus       101 ~~~~g~~~~~--~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~--------~~~~~g--~~~~~~~~~~~~  168 (311)
                      .+.+|.+.+.  .+|++++|+ +++.+++.+++++| |+|+++++.|.++..        .+...|  .+.+.+++++ +
T Consensus       100 a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all~pG-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~-~  176 (483)
T 1rv3_A          100 LQAYGLDPQCWGVNVQPYSGS-PANFAVYTALVEPH-GRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP-D  176 (483)
T ss_dssp             HHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHTCTT-CEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT-T
T ss_pred             HHHhCCCcccCceEEEECCcH-HHHHHHHHHhcCCC-CEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc-C
Confidence            8888765322  247888887 88888899999999 999999998876642        223344  3444444332 4


Q ss_pred             CcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCCCC
Q 021547          169 GWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGSIV  246 (311)
Q Consensus       169 ~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~~~  246 (311)
                      ++.+|+++|++.++ .++++|++ +++|++ .+++   +++|.++|+++|++||+|++|. ++.+.+....++.     .
T Consensus       177 ~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~-----~  246 (483)
T 1rv3_A          177 TGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE-----H  246 (483)
T ss_dssp             TCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-----T
T ss_pred             CCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC-----C
Confidence            57899999999987 78999988 888888 8888   9999999999999999999987 4444343333332     1


Q ss_pred             CeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          247 PVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       247 ~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      ..|++.|+||++  .|+|.||+++++.
T Consensus       247 ~div~~s~~K~l--~GprgG~i~~~~~  271 (483)
T 1rv3_A          247 CHVVTTTTHKTL--RGCRAGMIFYRRG  271 (483)
T ss_dssp             CSEEEEESSGGG--CCCSCEEEEEECS
T ss_pred             CcEEEecCcccC--CCCCceEEEEcch
Confidence            238899999985  6888999999764

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.86  E-value=1.1e-20  Score=173.60  Aligned_cols=188  Identities=16%  Similarity=0.148  Sum_probs=142.9

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH-----HHHcCcEEEEe
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF-----AKRNHIEVRHF  162 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~-----~~~~g~~~~~~  162 (311)
                      ...++++.+++++.        .+++++++++++|+.+ +..++++| |+|+++.+.|.+....     ++..|.+++.+
T Consensus        68 ~~~~l~~~la~l~g--------~~~~~~~~sG~~Ai~~-~~~l~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v  137 (400)
T 3nmy_A           68 TRFAYERCVAALEG--------GTRAFAFASGMAATST-VMELLDAG-SHVVAMDDLYGGTFRLFERVRRRTAGLDFSFV  137 (400)
T ss_dssp             HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHH-HHTTSCTT-CEEEEESSCCHHHHHHHHHTHHHHHCCEEEEE
T ss_pred             HHHHHHHHHHHHhC--------CCCEEEecCHHHHHHH-HHHHcCCC-CEEEEeCCCchHHHHHHHHhhHhhcCeEEEEE
Confidence            45678888888773        3367777788999998 56678899 9999999999865554     34469999988


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      +..       |++.+++.++++++++++++|+||+|.+++   +++|.++|+++|+++|+|++|+...+.  .  ++. +
T Consensus       138 ~~~-------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~--~--~~~-~  202 (400)
T 3nmy_A          138 DLT-------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQ--R--PLS-L  202 (400)
T ss_dssp             CTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC--C--GGG-G
T ss_pred             CCC-------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC--C--hhh-c
Confidence            753       889999999999999999999999999998   999999999999999999999853322  1  111 1


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeE-EEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGW-LATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~-i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                         +..+++.|+||.++.+|.++|+ +++...      ++++++++.... .+...+++.++++.+.++
T Consensus       203 ---g~div~~S~sK~l~g~g~~~gG~~vv~~~------~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~  262 (400)
T 3nmy_A          203 ---GADLVVHSATKYLNGHSDMVGGIAVVGDN------AELAEQMAFLQNSIGGVQGPFDSFLALRGLK  262 (400)
T ss_dssp             ---TCSEEEEETTTTTTCSSSCCCEEEEECSC------HHHHHHHHHHHHHHCCBCCHHHHHHHHHHHT
T ss_pred             ---CCcEEEecCccccCCCCCcceeEEEEeCC------HHHHHHHHHHHHhcCCCCCHHHHHHHHHhHh
Confidence               2349999999999999988877 443322      246777766533 445667777766655443

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.86  E-value=2.7e-21  Score=179.19  Aligned_cols=243  Identities=12%  Similarity=0.064  Sum_probs=151.4

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++.++||..+..... .-..+|.+.+++.+++.......|+ .....++++.+++++    +   ..+++++|+|++++
T Consensus        51 ~g~~ylD~~~~~~~~~-lG~~~p~v~~A~~~~~~~~~~~~~~-~~~~~~la~~l~~~~----~---~~~~v~~~~sGsea  121 (429)
T 4e77_A           51 DGKAYIDYVGSWGPMI-LGHNHPAIRQAVIEAVERGLSFGAP-TEMEVKMAQLVTDLV----P---TMDMVRMVNSGTEA  121 (429)
T ss_dssp             TCCEEEESSGGGTTCT-TCBTCHHHHHHHHHHHTTCSCCSSC-CHHHHHHHHHHHHHS----T---TCSEEEEESSHHHH
T ss_pred             CCCEEEECCCchhccc-cCCCCHHHHHHHHHHHHhCcccCCC-CHHHHHHHHHHHhhC----C---CCCEEEEeCcHHHH
Confidence            4788999987753211 1125899999999998754332342 223344444444444    3   46899999999999


Q ss_pred             HHHHHHHHhc--CCCCEEEecCCCCcchHHHHH-HcCcEEEEeeccCCCCc------------ccCHHHHHhhcCC--Cc
Q 021547          123 VEIILTVITR--LGAANILLPRPGWPFYESFAK-RNHIEVRHFDLLPERGW------------EVDLEAVEALADE--NT  185 (311)
Q Consensus       123 ~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~------------~~d~~~l~~~l~~--~~  185 (311)
                      ++.+++....  .+ +.|++..+.|.++...+. ..+.....+......+.            ..|+++|++.+++  ..
T Consensus       122 ~~~al~~a~~~~~~-~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~  200 (429)
T 4e77_A          122 TMSAIRLARGYTGR-DKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQE  200 (429)
T ss_dssp             HHHHHHHHHHHHCC-CEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTT
T ss_pred             HHHHHHHHHHhhCC-CEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCC
Confidence            9999886542  44 789999999987654211 11111100000000000            1178899988763  34


Q ss_pred             cEEEEeCCCCCC-ccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547          186 AAIVIINPCNPC-GNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW  263 (311)
Q Consensus       186 ~~i~i~~p~npt-G~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~  263 (311)
                      .++++++|+|++ |... +.+.+++|.++|++||+++|+||+|.++ ..|.. .....+....++   .|+||.++ +|+
T Consensus       201 ~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~-~~~~~~~~~pdi---~t~sK~~~-~G~  274 (429)
T 4e77_A          201 VACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALA-GAQDYYHVIPDL---TCLGKIIG-GGM  274 (429)
T ss_dssp             EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTT-CHHHHTTCCCSE---EEEEGGGG-TTS
T ss_pred             EEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcc-hHHHhcCCCCCe---eeeccccc-CCC
Confidence            456667776554 4433 4556999999999999999999999987 44432 222223222233   48999987 799


Q ss_pred             eeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547          264 RFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       264 r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |+||++++.        ++++.+...    ...+++.++++++++.+.|+
T Consensus       275 ~~G~~~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~  316 (429)
T 4e77_A          275 PVGAFGGRR--------EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLT  316 (429)
T ss_dssp             CCEEEEECH--------HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHH
T ss_pred             CeEEEEECH--------HHHHHhccCCCccccCCCCCCHHHHHHHHHHHH
Confidence            999998743        466666542    33456789999998888775

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.86  E-value=1.1e-20  Score=175.02  Aligned_cols=178  Identities=19%  Similarity=0.158  Sum_probs=136.5

Q ss_pred             HHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecC-CCCcchHHHH----------HHcCcEEEE
Q 021547           93 RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR-PGWPFYESFA----------KRNHIEVRH  161 (311)
Q Consensus        93 r~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~-p~~~~~~~~~----------~~~g~~~~~  161 (311)
                      ++.+.+++.+.+|......+++++ ||++|+..++.+++++| |+|+++. |.|..+...+          +..|.+++.
T Consensus        67 ~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~G-d~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~  144 (431)
T 3ht4_A           67 RDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPG-DELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNA  144 (431)
T ss_dssp             HHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTT-CEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEE
T ss_pred             HHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCC-CEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEE
Confidence            555555555544533322233355 66899999999999999 9999998 9999887554          457899999


Q ss_pred             eeccCCCCcccCHHHHHhhcCCCccEEEEe-CCCCCCccCCCHHHHHHHHHHHHH--hCCEEEEeccccCCccCCCCCCc
Q 021547          162 FDLLPERGWEVDLEAVEALADENTAAIVII-NPCNPCGNVLTYQHLQKIAETARK--LGILVIADEVYGHLAFGSTPYIP  238 (311)
Q Consensus       162 ~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~-~p~nptG~~~~~~~l~~l~~l~~~--~~~~li~D~ay~~~~~~~~~~~~  238 (311)
                      ++...  ++.+|++.|++.+++++++|+++ +|+||+|...+.+++++|+++|++  +|+++|+|++|+.+.++..+ ..
T Consensus       145 v~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~-~~  221 (431)
T 3ht4_A          145 VPLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP-CH  221 (431)
T ss_dssp             CCBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCG-GG
T ss_pred             eCCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCc-cc
Confidence            88753  46799999999999999999999 589999999999999999999999  99999999999987754322 11


Q ss_pred             ccccCCCCCeEEEecCcccCCC-CcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547          239 MGVFGSIVPVITLGSISKRWIV-PGWRFGWLATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       239 ~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                         +   +..++++|+||.++. .+...||++++.        ++++.++..
T Consensus       222 ---~---g~Di~~~S~sK~lgg~~~~~GG~v~~~~--------~li~~l~~~  259 (431)
T 3ht4_A          222 ---V---GADLMAGSLIKNPGGGIVKTGGYIVGKE--------QYVEACAYR  259 (431)
T ss_dssp             ---T---TCSEEEEETTSGGGTTTCSSCEEEEECH--------HHHHHHHHH
T ss_pred             ---c---CCeEEEcCccccCCCCCCCceEEEEecH--------HHHHHHHHH
Confidence               1   123999999998554 223339998753        477777664

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.86  E-value=1.8e-20  Score=173.36  Aligned_cols=158  Identities=22%  Similarity=0.180  Sum_probs=130.6

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEe-
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHF-  162 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~-  162 (311)
                      ...+++++++++++.        +..++++++++|+..++.+++++| |+|+++.+.|.++...+    +..|++++.+ 
T Consensus        59 ~~~~l~~~la~~~g~--------~~~v~~~sGt~A~~~~l~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~  129 (421)
T 2ctz_A           59 TVDVLEKRLAALEGG--------KAALATASGHAAQFLALTTLAQAG-DNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTS  129 (421)
T ss_dssp             HHHHHHHHHHHHHTC--------SEEEEESSHHHHHHHHHHHHCCTT-CEEEECSCCCHHHHHHHHTHHHHTTCEEEECC
T ss_pred             HHHHHHHHHHHHhCC--------CceEEecCHHHHHHHHHHHHhCCC-CEEEEeCCCchHHHHHHHHHHHHcCCEEEEEC
Confidence            457899999999842        234555556999999999999999 99999999999876654    7889999888 


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc-cCCccCCCCCCcccc
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY-GHLAFGSTPYIPMGV  241 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay-~~~~~~~~~~~~~~~  241 (311)
                      +..       |++++++.++++++++++++|+||+|.+++   +++|.++|+++|+++|+|++| +. .+.+.   ++. 
T Consensus       130 ~~~-------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~-g~~~~---~~~-  194 (421)
T 2ctz_A          130 REE-------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMG-GYLLR---PLA-  194 (421)
T ss_dssp             TTC-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGG-GTSCC---GGG-
T ss_pred             CCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcccc-cccCC---ccc-
Confidence            642       889999999999999999999999999999   999999999999999999999 53 23222   121 


Q ss_pred             cCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          242 FGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       242 ~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      .   +..+++.|+||.++.+|.|+|++++.+
T Consensus       195 ~---~~Di~~~s~~K~l~~~g~~~G~~~~~~  222 (421)
T 2ctz_A          195 W---GAALVTHSLTKWVGGHGAVIAGAIVDG  222 (421)
T ss_dssp             G---TCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred             c---CCeEEEECCcccccCCCCcEEEEEEec
Confidence            1   234899999999999999999999863

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.85  E-value=8e-20  Score=172.73  Aligned_cols=204  Identities=14%  Similarity=0.082  Sum_probs=161.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEE---EeCChHHHHHHHHHHHhcC----
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIY---ITLGCMEAVEIILTVITRL----  133 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~---~t~g~~~a~~~~~~~l~~~----  133 (311)
                      .++++.+.+++.+.+..+.. +|...++..++++.+.+++.+.+|.+..+++++   +|+|+++++..++.++..+    
T Consensus        66 ~~~~~~v~~~l~~~~~~~~~-~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~  144 (502)
T 3hbx_A           66 TWMEPECDKLIMSSINKNYV-DMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNK  144 (502)
T ss_dssp             CCCCHHHHHHHHHTTTCBTT-CTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhccCCC-ChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHH
Confidence            45678899998887764332 454455678899999999999888765455554   4899999999988888655    


Q ss_pred             ----CCC-----EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHH
Q 021547          134 ----GAA-----NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ  204 (311)
Q Consensus       134 ----g~d-----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~  204 (311)
                          | +     .|+++.++|..+...++..|++++.+++.. +++.+|++.|++++++++++|++++|+||||.+.+  
T Consensus       145 ~~~~G-~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~--  220 (502)
T 3hbx_A          145 RKAEG-KPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPQQAVDMVDENTICVAAILGSTLNGEFED--  220 (502)
T ss_dssp             HHHTT-CCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCC--
T ss_pred             HHhcC-CCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccC--
Confidence                7 6     999999999999999999999999998743 44789999999999999999999999999999988  


Q ss_pred             HHHHHHHHHHHh------CCEEEEeccccCCcc---CCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547          205 HLQKIAETARKL------GILVIADEVYGHLAF---GSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN  274 (311)
Q Consensus       205 ~l~~l~~l~~~~------~~~li~D~ay~~~~~---~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~  274 (311)
                       +++|.++|+++      |+++++|++|+.+..   .+.....+.   ...-.++..|.+|. +..+.++||+++.++.
T Consensus       221 -l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~---~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~~  294 (502)
T 3hbx_A          221 -VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR---LPLVKSINVSGHKY-GLVYAGIGWVIWRNKE  294 (502)
T ss_dssp             -HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT---STTEEEEEEETTTT-TCCCSSCEEEEESSGG
T ss_pred             -HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccC---CCCceEEEECcccc-cCCCCCeEEEEEeCHH
Confidence             88999999999      999999999986541   221111111   12234777899997 5667889999887643

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.85  E-value=8.1e-20  Score=173.03  Aligned_cols=199  Identities=10%  Similarity=-0.018  Sum_probs=157.4

Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-------------
Q 021547           66 VAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR-------------  132 (311)
Q Consensus        66 ~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~-------------  132 (311)
                      .+.+.+...+..+. ..|...++..++++.+++|+.+.+|++...+.+++|+|+++++..++.++..             
T Consensus       111 ~~~e~l~~~~~~~~-~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~  189 (511)
T 3vp6_A          111 LAGEWLTSTANTNM-FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAA  189 (511)
T ss_dssp             HHHHHHHHHHCCCS-SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGG
T ss_pred             HHHHHHHHHhccCC-CCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCccc
Confidence            34455555554433 4788888899999999999999999876677899999999999988887754             


Q ss_pred             -CCCCEEEecCCCCcchHHHHHHcCc---EEEEeeccCCCCcccCHHHHHhhcCCC------ccEEEEeCCCCCCccCCC
Q 021547          133 -LGAANILLPRPGWPFYESFAKRNHI---EVRHFDLLPERGWEVDLEAVEALADEN------TAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       133 -~g~d~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~i~i~~p~nptG~~~~  202 (311)
                       ++ +.|+++.+.|..+...++..|+   +++.++.+  .++.+|+++|++.++++      ++++++++++||+|.+.+
T Consensus       190 ~~~-~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~  266 (511)
T 3vp6_A          190 VPK-LVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP  266 (511)
T ss_dssp             SCC-EEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC
T ss_pred             CCC-eEEEECCCchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc
Confidence             46 7999999999999999999998   88888764  45789999999988754      788999999999999977


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCC-cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYI-PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN  274 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~  274 (311)
                         +++|+++|++||+|+++|++|+........+. .+...  ..-.+++.+++|+++.| ..+|++++.++.
T Consensus       267 ---l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~--~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~  333 (511)
T 3vp6_A          267 ---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGI--ERANSVTWNPHKMMGVL-LQCSAILVKEKG  333 (511)
T ss_dssp             ---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTG--GGCSEEEECTTSTTCCC-SCCEEEEESSTT
T ss_pred             ---HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCC--ccCCEEEECcccccCCC-cCeEEEEEeCHH
Confidence               99999999999999999999997543221111 11111  11236778999998776 778999987754

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.85  E-value=1.8e-20  Score=172.78  Aligned_cols=214  Identities=15%  Similarity=0.096  Sum_probs=133.4

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHHHHHHHHHhhcCCCCCCCCCE-EEeCC
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCY------APMFGLPLARRAVAEYLNRDLPYKLSADDI-YITLG  118 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y------~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v-~~t~g  118 (311)
                      +.++|..+..      +.+|.+.+++.+.+.......|      ........+++...+++.+.+|    .+.+ ++++|
T Consensus        33 ~~i~l~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~~~v~~~~  102 (425)
T 3ecd_A           33 SQVELIASEN------IVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFN----AGHANVQPHS  102 (425)
T ss_dssp             HSEECCTTCC------CCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHT----CSEEECCCSS
T ss_pred             cceeeecccC------CCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhC----CCCceeecCc
Confidence            5678866641      2389999999988743211112      1111111222222233333333    2234 45888


Q ss_pred             hHHHHHHHHHHHhcCCCCEEEecCCCCcc---hHHHHHHcCc--EEEEeeccCCCCcccCHHHHHhhcC-CCccEEEEeC
Q 021547          119 CMEAVEIILTVITRLGAANILLPRPGWPF---YESFAKRNHI--EVRHFDLLPERGWEVDLEAVEALAD-ENTAAIVIIN  192 (311)
Q Consensus       119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~---~~~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~  192 (311)
                      +++++..++.+++++| |+|+++.|+|..   +.......|.  +.+.++.. .+++.+|++.|++.++ ++++++++++
T Consensus       103 Gs~a~~~al~~~~~~g-d~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~i~~~~~~~v~~~~  180 (425)
T 3ecd_A          103 GAQANGAVMLALAKPG-DTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVS-RDTMLIDYDQVEALAQQHKPSLIIAGF  180 (425)
T ss_dssp             HHHHHHHHHHHHCCTT-CEEEEECC------------------CEEEEECCC-TTTSSCCHHHHHHHHHHHCCSEEEEEC
T ss_pred             hHHHHHHHHHHccCCC-CEEEEcccccccceecchhhhhcccceeeeecCCC-cccCccCHHHHHHHHhhcCCcEEEEcc
Confidence            8999999999999999 999999999987   3333234455  44455443 2457899999999886 5899999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      |+||+  ..+   +++|.++|++||++||+|++|. ++.+.+..+..+...     .|++.|+||.+  +|.|+||++++
T Consensus       181 ~~~~~--~~~---l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~-----di~~~s~sK~l--~g~~~g~~~~~  248 (425)
T 3ecd_A          181 SAYPR--KLD---FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHA-----HVVTSTTHKTL--RGPRGGFVLTN  248 (425)
T ss_dssp             SCCCS--CCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTC-----SEEEEESSGGG--CCCSCEEEEES
T ss_pred             ccCCC--cCC---HHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcC-----cEEEecCCccc--CCCCcEEEEeC
Confidence            99864  344   8999999999999999999964 344444333333221     28899999986  67899999986


Q ss_pred             CCCCccchhhHHHHHhhhh
Q 021547          272 DPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~  290 (311)
                      ++       .+.+.+....
T Consensus       249 ~~-------~~~~~~~~~~  260 (425)
T 3ecd_A          249 DE-------EIAKKINSAV  260 (425)
T ss_dssp             CH-------HHHHHHHHHH
T ss_pred             CH-------HHHHHHHhhh
Confidence            43       3666666553

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.85  E-value=5.2e-21  Score=178.50  Aligned_cols=241  Identities=12%  Similarity=0.029  Sum_probs=154.8

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHH-H-HHHH---HHhcCCCCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEE
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAE-D-AIVD---SVRSSMFNCYAP---MFGLPLARRAVAEYLNRDLPYKLSADDIY  114 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~-~-a~~~---~~~~~~~~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~v~  114 (311)
                      +++.++||..|.+....+. .+|.+. + ++.+   .+....  .|..   .....++++.+++++    + ....++|+
T Consensus        52 ~g~~ylD~~~~~~~~~lG~-~~p~v~~~~A~~~~~~~~~~~~--~~~~~~~~~~~~~la~~la~~~----~-~~~~~~v~  123 (449)
T 2cjg_A           52 TGRRYLDMFTFVASSALGM-NPPALVDDREFHAELMQAALNK--PSNSDVYSVAMARFVETFARVL----G-DPALPHLF  123 (449)
T ss_dssp             TCCEEEESSHHHHTCSSCB-SCHHHHTCHHHHHHHHHHHTCC--CCTTTCCCHHHHHHHHHHHHHH----C-CTTCCEEE
T ss_pred             CCcEEEEccCCccccCCCC-CCHHHHHHHHHHHHHHHHHhcC--CCCcccCCHHHHHHHHHHHHhc----C-CCCCCEEE
Confidence            4566888876643211122 478999 8 9998   766432  2321   112344555555555    3 23568999


Q ss_pred             EeCChHHHHHHHHHHHh---c-C----------CCCEEEecCCCCcchHHHHHH---------cCc-----EEEEeeccC
Q 021547          115 ITLGCMEAVEIILTVIT---R-L----------GAANILLPRPGWPFYESFAKR---------NHI-----EVRHFDLLP  166 (311)
Q Consensus       115 ~t~g~~~a~~~~~~~l~---~-~----------g~d~Vl~~~p~~~~~~~~~~~---------~g~-----~~~~~~~~~  166 (311)
                      +|+|+++|++.++..+.   . +          | |+|++..|.|+++...+..         .+.     ++..++...
T Consensus       124 ~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~-~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  202 (449)
T 2cjg_A          124 FVEGGALAVENALKAAFDWKSRHNQAHGIDPALG-TQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMR  202 (449)
T ss_dssp             EESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCC-CEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCC
T ss_pred             EeCchHHHHHHHHHHHHHHhcccccccccccCCC-CEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCC
Confidence            99999999999987653   2 2          7 9999999999875432211         122     344444321


Q ss_pred             CCCc--------ccCHHHHHhhcC---CCccEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC
Q 021547          167 ERGW--------EVDLEAVEALAD---ENTAAIVIINPCNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST  234 (311)
Q Consensus       167 ~~~~--------~~d~~~l~~~l~---~~~~~i~i~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~  234 (311)
                      ....        ..+++.|++.++   ++++++++..++||+| ..++++++++|.++|++||+++|+||+|.++.+.|.
T Consensus       203 ~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~  282 (449)
T 2cjg_A          203 PGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGT  282 (449)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred             chhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCc
Confidence            0011        245566888774   4566655544478999 599999999999999999999999999998766654


Q ss_pred             CCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHH-----Hh-hhhccccCCCchhHHHHHhhh
Q 021547          235 PYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGS-----IK-ACLGVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       235 ~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~q~~~~~~l  308 (311)
                       ...+..++...+++   ++||.+     |+||++++.        ++++.     +. .....+++.++++|+++.+.|
T Consensus       283 -~~~~~~~~~~~di~---t~sK~l-----~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal  345 (449)
T 2cjg_A          283 -AWAYQQLDVAPDIV---AFGKKT-----QVCGVMAGR--------RVDEVADNVFAVPSRLNSTWGGNLTDMVRARRIL  345 (449)
T ss_dssp             -SSTHHHHTCCCSEE---EECGGG-----SSEEEEECG--------GGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHH
T ss_pred             -ceeecccCCCceEE---EecCcc-----cEEEEEECH--------HHhhhhhhcccCCcccccCCCCCHHHHHHHHHHH
Confidence             22222222222333   789986     799999854        23443     11 123345778999999888777


Q ss_pred             h
Q 021547          309 V  309 (311)
Q Consensus       309 ~  309 (311)
                      +
T Consensus       346 ~  346 (449)
T 2cjg_A          346 E  346 (449)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.84  E-value=2.1e-20  Score=174.87  Aligned_cols=194  Identities=17%  Similarity=0.165  Sum_probs=139.1

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC-----C--C-C
Q 021547           65 AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL-----G--A-A  136 (311)
Q Consensus        65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~-----g--~-d  136 (311)
                      +.+.+++.+.+..+. ..|.+..+..++|+++++++.        .+++++|+|+++|+.+++.++.++     |  . |
T Consensus        53 ~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d  123 (467)
T 2oqx_A           53 GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSK  123 (467)
T ss_dssp             SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHHHHHC--------CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTT
T ss_pred             HHHHHHHHHHhccCc-ceeccCchhHHHHHHHHHHhC--------cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccc
Confidence            677788888775443 368877788999999999993        368999999999999999999876     6  2 6


Q ss_pred             EEEecCCCCcchHHHHHHcCcEEEEeecc----CC----CCcccCHHHHHhhcC----CCccEEEEeCCCCCC-ccCCCH
Q 021547          137 NILLPRPGWPFYESFAKRNHIEVRHFDLL----PE----RGWEVDLEAVEALAD----ENTAAIVIINPCNPC-GNVLTY  203 (311)
Q Consensus       137 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~----~~----~~~~~d~~~l~~~l~----~~~~~i~i~~p~npt-G~~~~~  203 (311)
                      +|++..+.|..+.......+.........    ..    .++.+|++.|++.++    ++++++++++|+||+ |.+++.
T Consensus       124 ~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~  203 (467)
T 2oqx_A          124 MVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSL  203 (467)
T ss_dssp             CEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCH
T ss_pred             eEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCH
Confidence            68877554455556666677766543211    11    245689999999887    378999999999998 999999


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccC----------CccCCCCCCcccc--cCCCCCeEEEecCcccCCCC-cceeeEEEe
Q 021547          204 QHLQKIAETARKLGILVIADEVYGH----------LAFGSTPYIPMGV--FGSIVPVITLGSISKRWIVP-GWRFGWLAT  270 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~----------~~~~~~~~~~~~~--~~~~~~~i~i~s~sK~~~~~-G~r~G~i~~  270 (311)
                      +++++|.++|++||++||+|+++..          ..+.+.....+..  +. ... +++.|+||.++++ |   ||+++
T Consensus       204 ~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~-~~d-~~~~s~sK~~g~~~G---g~~~~  278 (467)
T 2oqx_A          204 ANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYK-YAD-MLAMSAKKDAMVPMG---GLLCM  278 (467)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGG-GCS-EEEEESSSTTCCSSC---EEEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhc-cCC-eEEEecccccCCCCc---eEEEe
Confidence            9999999999999999999966543          1333332222110  01 112 4578999998877 5   77776


Q ss_pred             eC
Q 021547          271 ND  272 (311)
Q Consensus       271 ~~  272 (311)
                      ++
T Consensus       279 ~~  280 (467)
T 2oqx_A          279 KD  280 (467)
T ss_dssp             CS
T ss_pred             cC
Confidence            54

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.84  E-value=3.4e-20  Score=173.61  Aligned_cols=207  Identities=10%  Similarity=0.033  Sum_probs=145.3

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHh----cCC---CCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVR----SSM---FNCYAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~----~~~---~~~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      ++++.|+.+..+     +.++.+.+++.+.+.    .+.   ...|.+ ..-..++++.++++++      ..+++|++|
T Consensus        66 ~~~iyld~~~~g-----~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~t  134 (465)
T 3e9k_A           66 ENAIYFLGNSLG-----LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVG------ANEKEIALM  134 (465)
T ss_dssp             CBCEECBTTTSC-----CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHT------CCGGGEEEC
T ss_pred             CCeEEecCCccC-----CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcC------CCcCCEEEE
Confidence            467888887643     334445454444432    111   111211 1233567888888773      467899999


Q ss_pred             CChHHHHHHHHHHHhcCC--CCEEEecCCCCcchH----HHHHHcCcEEEE--eecc-CCCCcccCHHHHHhhcC---CC
Q 021547          117 LGCMEAVEIILTVITRLG--AANILLPRPGWPFYE----SFAKRNHIEVRH--FDLL-PERGWEVDLEAVEALAD---EN  184 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~~~g--~d~Vl~~~p~~~~~~----~~~~~~g~~~~~--~~~~-~~~~~~~d~~~l~~~l~---~~  184 (311)
                      +|+++++.+++.++.++|  +++|+++.|+|++..    ..++..|+++..  +.+. ..+++.+|++++++.++   ++
T Consensus       135 ~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~  214 (465)
T 3e9k_A          135 NALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDS  214 (465)
T ss_dssp             SCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGG
T ss_pred             CCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCC
Confidence            999999999999998765  145999999998743    367778887521  1111 23457789999999886   67


Q ss_pred             ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcce
Q 021547          185 TAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR  264 (311)
Q Consensus       185 ~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r  264 (311)
                      ++++++++|+||||.+++   +++|.++|+++|+++|+|++|+..    ..+..+....   ..+++.|++|.++....+
T Consensus       215 ~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g----~~~~~~~~~~---~D~~~~s~~K~l~~gp~~  284 (465)
T 3e9k_A          215 IAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVG----NVELYLHDWG---VDFACWCSYKYLNAGAGG  284 (465)
T ss_dssp             EEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTT----TSCCCHHHHT---CCEEEECSSSTTCCCTTC
T ss_pred             eEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcC----CcCCchhhcC---CCEEEECcccccccCCCc
Confidence            899999999999999999   899999999999999999999852    2222222222   348899999998433337


Q ss_pred             eeEEEeeC
Q 021547          265 FGWLATND  272 (311)
Q Consensus       265 ~G~i~~~~  272 (311)
                      +|+++++.
T Consensus       285 ~g~l~~~~  292 (465)
T 3e9k_A          285 IAGAFIHE  292 (465)
T ss_dssp             CCEEEECG
T ss_pred             eEEEEEcH
Confidence            89988754

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.83  E-value=3.8e-19  Score=168.25  Aligned_cols=185  Identities=10%  Similarity=-0.027  Sum_probs=146.2

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc--------CC----CC-EEEecCCCCcch
Q 021547           82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR--------LG----AA-NILLPRPGWPFY  148 (311)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~--------~g----~d-~Vl~~~p~~~~~  148 (311)
                      .|....+..++++.+.+++.+.+|.+.+.+++++|+|+++++..++.++..        +|    .+ .|+++.+.|..+
T Consensus       123 ~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~  202 (504)
T 2okj_A          123 TYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSI  202 (504)
T ss_dssp             CTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHH
T ss_pred             chhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHH
Confidence            576666677888899888888777654467899999999999999888753        34    14 799999999999


Q ss_pred             HHHHHHcCc---EEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCE
Q 021547          149 ESFAKRNHI---EVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGIL  219 (311)
Q Consensus       149 ~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~  219 (311)
                      ...++..|.   +++.++.+  .++.+|++.|++.+++      ++++|++++|+||||.+.+   +++|.++|+++|+|
T Consensus       203 ~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~g~~  277 (504)
T 2okj_A          203 KKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYNLW  277 (504)
T ss_dssp             HHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHHTCE
T ss_pred             HHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCE
Confidence            999998887   78888764  4678999999998865      5788999999999999988   99999999999999


Q ss_pred             EEEeccccCCccCCCCC-CcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547          220 VIADEVYGHLAFGSTPY-IPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN  274 (311)
Q Consensus       220 li~D~ay~~~~~~~~~~-~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~  274 (311)
                      +++|++|+...+....+ ..+..+  ....+++.|++|.++.| .++|++++.+++
T Consensus       278 lhvD~a~~~~~~~~~~~~~~~~g~--~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~  330 (504)
T 2okj_A          278 LHVDAAWGGGLLMSRKHRHKLNGI--ERANSVTWNPHKMMGVL-LQCSAILVKEKG  330 (504)
T ss_dssp             EEEEETTGGGGGGCTTTGGGGTTG--GGCSEEEECTTSTTCCC-SCCEEEEESSTT
T ss_pred             EEEehhhhhHHHhCHhhHhhcCCc--ccCCEEEECchhhcCCC-cceEEEEEECHH
Confidence            99999999865432221 112111  11237778999998766 689999997653

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.83  E-value=7.6e-20  Score=172.21  Aligned_cols=200  Identities=11%  Similarity=0.060  Sum_probs=152.7

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-------CCCEEEeCChHHHHHHHHHHHhcC---
Q 021547           64 AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLS-------ADDIYITLGCMEAVEIILTVITRL---  133 (311)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-------~~~v~~t~g~~~a~~~~~~~l~~~---  133 (311)
                      +..+.+++...+..+ ...|....+..++++.+++++.+.+|.+..       ..++++|+|+|+|+..++.++..+   
T Consensus        87 ~~~~~~~~~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~  165 (486)
T 1js3_A           87 PAMLADMLCGAIGCI-GFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVR  165 (486)
T ss_dssp             HHHHHHHHHHHHCCC-CSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcC-ccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhh
Confidence            445666766666433 336766667889999999999998887642       346899999999998888776421   


Q ss_pred             ------CCC----------EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCcc------EEEEe
Q 021547          134 ------GAA----------NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTA------AIVII  191 (311)
Q Consensus       134 ------g~d----------~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~------~i~i~  191 (311)
                            | |          .|+++.+.|..+...++..|++++.++++  .++.+|+++|++.++++++      +++++
T Consensus       166 ~~~~~~g-d~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~  242 (486)
T 1js3_A          166 RLQAASP-GLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVAT  242 (486)
T ss_dssp             HHHHHST-TCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             hhhccCc-cchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEe
Confidence                  3 3          38889999999999999999999999874  5778999999999876553      78889


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      +|+||||.+-+   +++|+++|++||+|+++|++|+...+....... +..+. ..+ .++.++||.++.| +++|++++
T Consensus       243 ~~~n~tG~~~~---l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~-~ad-si~~~~hK~~~~p-~~~G~l~~  316 (486)
T 1js3_A          243 LGTTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVE-FAD-SFNFNPHKWLLVN-FDCSAMWV  316 (486)
T ss_dssp             BSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGG-GCS-EEEECHHHHSSCC-SSCEEEEE
T ss_pred             CCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCcc-ccC-eeEEchhhhcCCC-cceEEEEE
Confidence            99999999877   999999999999999999999975432211111 11111 112 5567899997776 89999999


Q ss_pred             eCC
Q 021547          271 NDP  273 (311)
Q Consensus       271 ~~~  273 (311)
                      .++
T Consensus       317 ~~~  319 (486)
T 1js3_A          317 KRR  319 (486)
T ss_dssp             SCH
T ss_pred             eCH
Confidence            764

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.83  E-value=7.7e-19  Score=166.56  Aligned_cols=181  Identities=13%  Similarity=0.020  Sum_probs=143.3

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh-------c-CCCC------EEEecCCCCcc
Q 021547           82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT-------R-LGAA------NILLPRPGWPF  147 (311)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-------~-~g~d------~Vl~~~p~~~~  147 (311)
                      .|...++..++++.+.+++.+.+|.+  .+++++|+|+|+++..++.++.       + +| +      .|+++.+.|..
T Consensus       139 ~~~~s~~~~~le~~~~~~la~l~g~~--~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G-~~~~~~~~vl~s~~~h~s  215 (515)
T 2jis_A          139 TYEIAPVFVLMEEEVLRKLRALVGWS--SGDGIFCPGGSISNMYAVNLARYQRYPDCKQRG-LRTLPPLALFTSKECHYS  215 (515)
T ss_dssp             CTTTCHHHHHHHHHHHHHHHHHHTCS--SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHC-GGGSCCEEEEEETTSCTH
T ss_pred             chhhchHHHHHHHHHHHHHHHHhCCC--CCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcC-ccccCCeEEEECCCccHH
Confidence            56666677777777777777766654  6789999999999988888773       2 57 6      89999999999


Q ss_pred             hHHHHHHcCc---EEEEeeccCCCCcccCHHHHHhhcCC------CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCC
Q 021547          148 YESFAKRNHI---EVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGI  218 (311)
Q Consensus       148 ~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~  218 (311)
                      +...++..|.   +++.++.+  .++.+|++.|++.+++      ++++|++++|+|+||.+.+   +++|.++|+++|+
T Consensus       216 ~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~g~  290 (515)
T 2jis_A          216 IQKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRHGL  290 (515)
T ss_dssp             HHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTC
T ss_pred             HHHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHcCC
Confidence            9999999988   88888764  4678999999998865      4888999999999999988   9999999999999


Q ss_pred             EEEEeccccCCccCCCCCC-cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          219 LVIADEVYGHLAFGSTPYI-PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       219 ~li~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      |+|+|++|+...+....+. .+..+  ....+++.|++|+++.| .++|++++.++
T Consensus       291 ~l~vD~a~~~~~~~~~~~~~~~~g~--~~aD~v~~s~hK~l~~p-~g~G~l~~~~~  343 (515)
T 2jis_A          291 WLHVDAAWGGSVLLSQTHRHLLDGI--QRADSVAWNPHKLLAAG-LQCSALLLQDT  343 (515)
T ss_dssp             EEEEEETTGGGGGGCTTTGGGGTTG--GGCSEEEECTTSTTCCC-SCCEEEEESCC
T ss_pred             eEEEehhhhhHHHhChhhHhhcCCC--ccCCEEEECcccccCCC-CCeeEEEEeCh
Confidence            9999999998665322211 12211  12338888999997755 57999999765

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.82  E-value=4.2e-19  Score=167.65  Aligned_cols=203  Identities=15%  Similarity=0.101  Sum_probs=153.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH----h-----
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI----T-----  131 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l----~-----  131 (311)
                      .+.++.+.+++.....+.....|.......++++.+.+++.+.+|.+ ..+++++|+|+++++..++.++    +     
T Consensus       110 ~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~  188 (497)
T 2qma_A          110 PPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSG  188 (497)
T ss_dssp             CCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhcc
Confidence            35677777777655443333356555567888999888888888764 2378999999999999888873    2     


Q ss_pred             ----cC------CCC-EEEecCCCCcchHHHHHHcCc---EEEEeeccCCCCcccCHHHHHhhcCCC----cc--EEEEe
Q 021547          132 ----RL------GAA-NILLPRPGWPFYESFAKRNHI---EVRHFDLLPERGWEVDLEAVEALADEN----TA--AIVII  191 (311)
Q Consensus       132 ----~~------g~d-~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~----~~--~i~i~  191 (311)
                          .+      | + .|+++.+.|..+...++..|.   +++.++.+  .++.+|+++|++.++++    ++  +++++
T Consensus       189 ~~~~~~G~~~~~g-~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~  265 (497)
T 2qma_A          189 HSIQKLGLPDYAD-KLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGT  265 (497)
T ss_dssp             CCHHHHCSCGGGG-GEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEE
T ss_pred             cchhhcccccccC-CeEEEECCCchHHHHHHHHHcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEc
Confidence                12      4 6 899999999999999998877   78888764  46789999999988653    33  77888


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      +++||||...+   +++|.++|++||+|+++|++|+.+.+... ... +..+  ....+++.|+||+++.| .++|++++
T Consensus       266 ~~~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi--~~~D~i~~s~hK~l~~p-~~~G~l~~  338 (497)
T 2qma_A          266 AGTTDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGV--ERAHSISVDFHKLFYQT-ISCGALLV  338 (497)
T ss_dssp             BSCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTG--GGCSEEEEETTTTTCCC-SSCEEEEE
T ss_pred             CCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCc--ccCCEEEEcchhccCCC-cceEEEEE
Confidence            89999999888   99999999999999999999998654322 111 1111  12237778999997776 69999998


Q ss_pred             eCCC
Q 021547          271 NDPN  274 (311)
Q Consensus       271 ~~~~  274 (311)
                      .++.
T Consensus       339 ~~~~  342 (497)
T 2qma_A          339 NDKS  342 (497)
T ss_dssp             SCGG
T ss_pred             eCHH
Confidence            7653

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.82  E-value=8.2e-20  Score=170.24  Aligned_cols=212  Identities=12%  Similarity=0.024  Sum_probs=143.7

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---CCcHHHH--HHHH-HHHhhcCCCCCCCCCEEE-eCC
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPM---FGLPLAR--RAVA-EYLNRDLPYKLSADDIYI-TLG  118 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~---~g~~~lr--~~ia-~~l~~~~g~~~~~~~v~~-t~g  118 (311)
                      +.|++..+.      .+.+|.+.+++.+.+.......|+..   .|....+  +.++ +++.+.+|.+    .+.+ ++|
T Consensus        46 ~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~----~~~v~~~s  115 (447)
T 3h7f_A           46 DTLEMIASE------NFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAE----FANVQPHS  115 (447)
T ss_dssp             HSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS----EEECCCSS
T ss_pred             CceeEecCC------CCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCC----ceEEEeCC
Confidence            668885543      23489999999887753222223221   2434333  4444 5555544432    2444 788


Q ss_pred             hHHHHHHHHHHHhcCCCCEEEecCCCCcchH-H--H--HHHcCcEEEEeeccCCCCcccCHHHHHhhcC-CCccEEEEeC
Q 021547          119 CMEAVEIILTVITRLGAANILLPRPGWPFYE-S--F--AKRNHIEVRHFDLLPERGWEVDLEAVEALAD-ENTAAIVIIN  192 (311)
Q Consensus       119 ~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~-~--~--~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~  192 (311)
                      +++++..++.+++++| |+|+++.|+|..+. .  .  ....+...+.+++.+ +++.+|++++++.++ .+++++++++
T Consensus       116 Gs~a~~~a~~~~~~~G-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~i~~~~  193 (447)
T 3h7f_A          116 GAQANAAVLHALMSPG-ERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-ATHLIDMDAVRATALEFRPKVIIAGW  193 (447)
T ss_dssp             HHHHHHHHHHHHCCTT-CEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHHCCSEEEEEC
T ss_pred             HHHHHHHHHHHhcCCC-CEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhcCCeEEEEcC
Confidence            8999999999999999 99999999987621 1  1  112344566665533 456799999999885 4788888889


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      |+||++.     ++++|.++|+++|+++|+|++|. ++.+.+..+.++..     ..|++.|+||++  +|+|.||++++
T Consensus       194 ~~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~-----~di~~~s~sK~l--~G~~gG~i~~~  261 (447)
T 3h7f_A          194 SAYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPH-----ADVVSTTVHKTL--GGGRSGLIVGK  261 (447)
T ss_dssp             SSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTT-----CSEEEEESSGGG--CCCSCEEEEEC
T ss_pred             CCCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCC-----CcEEEecCCcCC--CCCCeEEEEEC
Confidence            9999876     39999999999999999999974 44444432222211     127899999986  47899999875


Q ss_pred             CCCCccchhhHHHHHhhh
Q 021547          272 DPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~  289 (311)
                      .        ++++.+...
T Consensus       262 ~--------~~~~~l~~~  271 (447)
T 3h7f_A          262 Q--------QYAKAINSA  271 (447)
T ss_dssp             G--------GGHHHHHHH
T ss_pred             H--------HHHHHHhhh
Confidence            3        256666554

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.81  E-value=9.7e-20  Score=167.61  Aligned_cols=204  Identities=13%  Similarity=0.071  Sum_probs=129.8

Q ss_pred             CcHHHHHHHHHHHhcCCCC------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCC
Q 021547           63 TAAVAEDAIVDSVRSSMFN------CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAA  136 (311)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d  136 (311)
                      .+|.+.+++.+.+......      .|........+++...+++.+.+|  .++++|++++| ++++..++.+++++| |
T Consensus        42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~~sG-s~a~~~a~~~~~~~g-d  117 (420)
T 3gbx_A           42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQPHSG-SQANFAVYTALLQPG-D  117 (420)
T ss_dssp             CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHCCTT-C
T ss_pred             CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEecCc-HHHHHHHHHHhcCCC-C
Confidence            5899999998887432211      122222334444433344444334  34555656665 789999999999999 9


Q ss_pred             EEEecCCCCcchH---HHHHHcCc--EEEEeeccCCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHH
Q 021547          137 NILLPRPGWPFYE---SFAKRNHI--EVRHFDLLPERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIA  210 (311)
Q Consensus       137 ~Vl~~~p~~~~~~---~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~  210 (311)
                      +|+++.|+|..+.   ......|.  ..+.++.+  .++.+|++.|++.+++ +++++++++|+||+  ..+   +++|.
T Consensus       118 ~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~---l~~l~  190 (420)
T 3gbx_A          118 TVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VVD---WAKMR  190 (420)
T ss_dssp             EEEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CCC---HHHHH
T ss_pred             EEEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhcCCeEEEEecCccCC--ccC---HHHHH
Confidence            9999999997733   22222333  44444443  5667999999998876 58999998999874  555   89999


Q ss_pred             HHHHHhCCEEEEeccccC-CccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547          211 ETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       211 ~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      ++|++||+++|+||+|.. +.+.+..+..+.     ...|++.|+||.++  |.+.||+++++..     ..+.+.+...
T Consensus       191 ~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-----~~di~~~s~sK~~~--g~~gg~~~~~~~~-----~~~~~~~~~~  258 (420)
T 3gbx_A          191 EIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-----HAHVVTTTTHKTLA--GPRGGLILAKGGD-----EELYKKLNSA  258 (420)
T ss_dssp             HHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-----TSSEEEEESSGGGC--SCSCEEEEESSCC-----HHHHHHHHHH
T ss_pred             HHHHHcCCEEEEECCcchhceecccCCcccc-----cCCEEEeecccCCC--CCCceEEEEcCCc-----HHHHHHhhhh
Confidence            999999999999999864 333332222222     13489999999975  5556999886421     1356666554

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.81  E-value=1.6e-19  Score=168.18  Aligned_cols=170  Identities=13%  Similarity=0.097  Sum_probs=127.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEe
Q 021547           83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHF  162 (311)
Q Consensus        83 Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~  162 (311)
                      |.+.....++++.+++ ++      .. +++++|+|+++++.+++.+++++| |+|+++.|+|.++...+...|++++.+
T Consensus        53 ~~~~~~~~~~~~~la~-~g------~~-~~v~~~~G~t~a~~~~~~a~~~~g-d~Vlv~~~~h~s~~~~~~~~G~~~~~v  123 (446)
T 2x3l_A           53 HHPEEVILKSMKQVEK-HS------DY-DGYFLVNGTTSGILSVIQSFSQKK-GDILMARNVHKSVLHALDISQQEGHFI  123 (446)
T ss_dssp             TSCSSHHHHHHHHHCS-CT------TE-EEEEESSHHHHHHHHHHHTTTTSS-SCEEECTTCCHHHHHHHHHHTCCEEEC
T ss_pred             cCcchHHHHHHHHHHh-cC------CC-ceEEEeCCHHHHHHHHHHHhcCCC-CEEEEecCccHHHHHHHHHcCCeEEEE
Confidence            3344455677777776 53      22 679999999999999999999999 999999999999999999999999998


Q ss_pred             eccCCCC----cccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC-CccCCCCCC
Q 021547          163 DLLPERG----WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH-LAFGSTPYI  237 (311)
Q Consensus       163 ~~~~~~~----~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~  237 (311)
                      +....++    +.+|++.+   +.++++++++++ .|++|.+++   +++|.++|+++|+++|+|++|+. +.|.+. +.
T Consensus       124 ~~~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~  195 (446)
T 2x3l_A          124 ETHQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PD  195 (446)
T ss_dssp             EEEECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CC
T ss_pred             eCeeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CC
Confidence            8733333    56788877   456789999999 556999999   89999999999999999999996 445543 22


Q ss_pred             cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          238 PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       238 ~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      ....+..   .+++.|+||.++ ++.++||+++++.
T Consensus       196 ~~~~~g~---Di~~~S~~K~l~-~~~g~g~l~~~~~  227 (446)
T 2x3l_A          196 STLNYQA---DYVVQSFHKTLP-ALTMGSVLYIHKN  227 (446)
T ss_dssp             CGGGGTC---SEEEECHHHHSS-SCTTCEEEEEETT
T ss_pred             ChHHcCC---CEEEECCccccc-cccccEEEEEcCC
Confidence            3222222   389999999633 3345899998764

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.81  E-value=3.6e-18  Score=156.08  Aligned_cols=148  Identities=15%  Similarity=0.197  Sum_probs=125.6

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-------hcCC
Q 021547           62 RTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-------TRLG  134 (311)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-------~~~g  134 (311)
                      ..++.+.+++.+.+...   .|.+..+..++|++++++++.        +++++++++++++..++.++       .++|
T Consensus        12 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g   80 (390)
T 3b8x_A           12 TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTFGS--------KYAVMVSSGSTANLLMIAALFFTKKPRLKKG   80 (390)
T ss_dssp             CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHHTC--------SEEEEESCHHHHHHHHHHHTTSSSSCSCCTT
T ss_pred             CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHCC--------CcEEEECCHHHHHHHHHHHHHhhhhcCCCCc
Confidence            35788889999888653   455667889999999999942        25777888889999999998       7789


Q ss_pred             CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547          135 AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETAR  214 (311)
Q Consensus       135 ~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~  214 (311)
                       |+|+++.++|..+...++..|.+++.+++++. ++.+|+++|++.++++++++++++   ++|...+   +++|.++|+
T Consensus        81 -~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~---~~~i~~l~~  152 (390)
T 3b8x_A           81 -DEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNPNN---FDEINKIIG  152 (390)
T ss_dssp             -CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCC---HHHHHHHHT
T ss_pred             -CEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccChhh---HHHHHHHHH
Confidence             99999999999999999999999999987543 478999999999988899998875   4555555   999999999


Q ss_pred             HhCCEEEEeccccC
Q 021547          215 KLGILVIADEVYGH  228 (311)
Q Consensus       215 ~~~~~li~D~ay~~  228 (311)
                      ++|+++|+|++|+.
T Consensus       153 ~~~~~li~D~a~~~  166 (390)
T 3b8x_A          153 GRDIILLEDNCESM  166 (390)
T ss_dssp             TSCCEEEEECTTCT
T ss_pred             HcCCEEEEECcCcc
Confidence            99999999999994

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.80  E-value=3e-19  Score=163.65  Aligned_cols=210  Identities=10%  Similarity=0.067  Sum_probs=139.3

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHH----HHHHHHHhhcCCCCCCCCCE
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCY------APMFGLPLAR----RAVAEYLNRDLPYKLSADDI  113 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y------~~~~g~~~lr----~~ia~~l~~~~g~~~~~~~v  113 (311)
                      .+.+++|+.++|     +  ++.+.+++.+.+.......|      .......+++    +++++++    |.  ..+.+
T Consensus        23 ~~~~~~~~~~~~-----~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~----g~--~~~~i   89 (405)
T 2vi8_A           23 HAKIELIASENF-----V--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF----GA--EHANV   89 (405)
T ss_dssp             HHSEECCTTCCC-----C--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH----TC--SEEEC
T ss_pred             hcceeeccCccc-----C--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh----CC--CceEE
Confidence            356778866653     2  88999999888752211112      1112234555    4566655    32  33334


Q ss_pred             EEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH-H--HHHcCc--EEEEeeccCCCCcccCHHHHHhhcCC-CccE
Q 021547          114 YITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES-F--AKRNHI--EVRHFDLLPERGWEVDLEAVEALADE-NTAA  187 (311)
Q Consensus       114 ~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~-~--~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~  187 (311)
                      ++++| ++++..++.+++++| |+|+++.|+|..+.. .  +...|.  +++.+++.+ .++.+|++.+++.+++ ++++
T Consensus        90 ~~~sG-t~a~~~a~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~  166 (405)
T 2vi8_A           90 QPHSG-AQANMAVYFTVLEHG-DTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKL  166 (405)
T ss_dssp             CCSSH-HHHHHHHHHHHCCTT-CEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSE
T ss_pred             EecCc-HHHHHHHHHHhcCCC-CEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeE
Confidence            44555 999999999999999 999999999987643 1  123333  677766532 4577999999998875 7888


Q ss_pred             EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc-CCCCCCcccccCCCCCeEEEecCcccCC-CCccee
Q 021547          188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF-GSTPYIPMGVFGSIVPVITLGSISKRWI-VPGWRF  265 (311)
Q Consensus       188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~-~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~  265 (311)
                      +++ +|+|. |...+   +++|.++|++||+++|+|++|..... .+.....   +..  ..+++.|+||.|+ .+|   
T Consensus       167 v~~-~~~~~-~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~~~--~di~~~s~sK~~~g~~g---  233 (405)
T 2vi8_A          167 IVA-AAAAY-PRIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP---VPY--AHFVTTTTHKTLRGPRG---  233 (405)
T ss_dssp             EEE-CCSSC-CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS---TTT--CSEEEEESSSTTCCCSC---
T ss_pred             EEE-eCCCC-CccCC---HHHHHHHHHHcCCEEEEEccccccccccCcCCCc---ccc--CCEEEEeccccCCCCCC---
Confidence            776 44443 45445   89999999999999999999994322 2221111   111  2288999999987 556   


Q ss_pred             eEEEeeCCCCccchhhHHHHHhhhh
Q 021547          266 GWLATNDPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       266 G~i~~~~~~~~~~~~~~~~~~~~~~  290 (311)
                      ||++++.        ++++.++...
T Consensus       234 G~~~~~~--------~~~~~l~~~~  250 (405)
T 2vi8_A          234 GMILCQE--------QFAKQIDKAI  250 (405)
T ss_dssp             EEEEECH--------HHHHHHHHHH
T ss_pred             eEEEEcH--------HHHHHHHhhh
Confidence            9999852        3667766553

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.67  E-value=5e-21  Score=178.54  Aligned_cols=237  Identities=19%  Similarity=0.103  Sum_probs=161.6

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.+|||..|......+ ..+|.+.+++.+++.......|. .....+|.+.+++++    +   ..+.+++++|+++
T Consensus        97 ~dG~~yiD~~~~~~~~~lG-h~~p~V~~Av~~q~~~~~~~~~~-~~~~~~Lae~L~~~~----p---~~~~v~~~nSGse  167 (465)
T 2yky_A           97 VDGHAYVNFLGEYTAGLFG-HSHPVIRAAVERALAVGLNLSTQ-TENEALFAEAVCDRF----P---SIDLVRFTNSGTE  167 (465)
Confidence            3588999998885321111 25789999999988754333343 234556666666665    2   3478999999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHH----HcCc--EEEEeeccCCCCcccCHHHHHhhcC---CCccEEEEe
Q 021547          122 AVEIILTVITR-LGAANILLPRPGWPFYESFAK----RNHI--EVRHFDLLPERGWEVDLEAVEALAD---ENTAAIVII  191 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~----~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~  191 (311)
                      |+..+++.... .|+++|++..++|.++...+.    ..|.  .+..++.       -|++.|++.++   ++++++++.
T Consensus       168 A~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi~e  240 (465)
T 2yky_A          168 ANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAILVE  240 (465)
Confidence            99999987642 333899999999987654333    1222  2222221       27888888887   567777766


Q ss_pred             CCCCCCccCC-CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          192 NPCNPCGNVL-TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       192 ~p~nptG~~~-~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      ..++++|... +++.+++|.++|++||+++|+||+|. +.. +. ...+..+.   ....+.+|||.++. |+|+||+++
T Consensus       241 pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~-~~a~~~~g---v~pDi~t~sK~lg~-G~piG~v~~  313 (465)
T 2yky_A          241 PMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SG-GGAQEMLG---ISADLTTLGKYIGG-GMSFGAFGG  313 (465)
Confidence            5566799654 67889999999999999999999999 643 22 22222222   22335589999886 999999988


Q ss_pred             eCCCCccchhhHHHHHhh------hhccccCCCchhHHHHHhhhh
Q 021547          271 NDPNGVLQKSGIVGSIKA------CLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +.        ++++.+..      +...+++.|+++|+++.+.|+
T Consensus       314 ~~--------~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~  350 (465)
T 2yky_A          314 RR--------DLMERFDPARDGAFAHAGTFNNNILTMSAGHAALT  350 (465)
Confidence            64        36666655      233467889999998876664

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.78  E-value=7.2e-19  Score=164.31  Aligned_cols=202  Identities=12%  Similarity=0.054  Sum_probs=142.1

Q ss_pred             cHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH-HHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeecc
Q 021547           89 LPLARRAVAEYLNRDLPYKLSADDIYITLGCM-EAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLL  165 (311)
Q Consensus        89 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~-~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~  165 (311)
                      ..++.+.+.+++.+.+|.+  .+ +++|+|++ .++.+++.++..  +| +.|+++.+.|..+...++..|++++.++..
T Consensus       131 ~~~~~~~~~~~la~~~g~~--~~-~~~t~g~te~a~~~al~~~~~~~~~-~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~  206 (456)
T 2z67_A          131 MYALTNKILESFFKQLGLN--VH-AIATPISTGMSISLCLSAARKKYGS-NVVIYPYASHKSPIKAVSFVGMNMRLVETV  206 (456)
T ss_dssp             HHHHHHHHHHHHHHHTTCC--CE-EEEESSCHHHHHHHHHHHHHHHHCC-CEEEEECCCCHHHHHHHHHTTCEEEEECCE
T ss_pred             HHHHHHHHHHHHHHHcCCC--CC-EEEeCcHHHHHHHHHHHHHHHhcCC-CEEEEECCCcHHHHHHHHHcCCCceEEEEe
Confidence            4566677777777766654  34 99999999 566656665543  66 789999999999999999999999998864


Q ss_pred             C-CCCcccCHHHHHhhc-C----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcc
Q 021547          166 P-ERGWEVDLEAVEALA-D----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM  239 (311)
Q Consensus       166 ~-~~~~~~d~~~l~~~l-~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~  239 (311)
                      + .+++.+|+++|++.+ +    .++.++++++|+||||.+.+   +++|.++|+++|+++++|++|+...++-.+ ...
T Consensus       207 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~~~-~~~  282 (456)
T 2z67_A          207 LDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYLE-KLK  282 (456)
T ss_dssp             EETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHH-HHH
T ss_pred             ccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHhhH-HHH
Confidence            3 456789999999988 4    36677788999999999988   999999999999999999999865431001 111


Q ss_pred             cccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhh
Q 021547          240 GVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFL  307 (311)
Q Consensus       240 ~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~  307 (311)
                      ..+.. ...+++.|++|++ ..+.++||+++.++       ++++.+..... .....+.+.+.++...
T Consensus       283 ~~~~~-~~D~~~~s~hK~~-~~p~g~G~l~~~~~-------~~~~~l~~~~~g~~~~~~~~~~~aal~~  342 (456)
T 2z67_A          283 KAFKY-RVDAVVSSSDKNL-LTPIGGGLVYSTDA-------EFIKEISLSYPGRASATPVVNTLVSLLS  342 (456)
T ss_dssp             HHHTS-CCSEEEEEHHHHH-CCCSSCEEEEESCH-------HHHHHHHTTSCSCBCSHHHHHHHHHHHH
T ss_pred             HhhCC-CCCEEEEcCCCCc-CCCCCeEEEEEcCH-------HHHhhcCcCCCCCCCCCHHHHHHHHHHH
Confidence            11111 1226788999974 45589999998543       35666544322 1112224445554443

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.77  E-value=2.5e-18  Score=157.60  Aligned_cols=195  Identities=10%  Similarity=-0.002  Sum_probs=125.3

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE-eCChHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS-MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI-TLGCME  121 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~-t~g~~~  121 (311)
                      .+.+++|+.|.      .++++.+++++.+..... ....+.+  ...++.+.+.+++.+.+|.+ .+++|++ |+|+++
T Consensus        38 ~~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~~-~~~~i~~~t~g~t~  108 (398)
T 2fyf_A           38 KPRDGRFGSGP------SKVRLEQLQTLTTTAAALFGTSHRQA--PVKNLVGRVRSGLAELFSLP-DGYEVILGNGGATA  108 (398)
T ss_dssp             SCSSCBCCSSS------CCCCHHHHHGGGTTTTTTTTSCTTSH--HHHHHHHHHHHHHHHHTTCC-TTCEEEEEETCHHH
T ss_pred             ccCCccccCCC------CCCCHHHHHHHhhcCCCccCcCcCCH--HHHHHHHHHHHHHHHHhCCC-CCceEEEeCCchhH
Confidence            34567777553      467888988887631110 1112222  22234444555555444543 3468998 999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcc-hHHHHHHc--CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCc
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPF-YESFAKRN--HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCG  198 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG  198 (311)
                      ++.+++.+++++|  .+++..+.|.. ....+...  |.+++.++.+  .+...+.     .++++++++++++|+||||
T Consensus       109 al~~~~~~l~~~g--v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~nptG  179 (398)
T 2fyf_A          109 FWDAAAFGLIDKR--SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETSTG  179 (398)
T ss_dssp             HHHHHHHHTCSSC--EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTTT
T ss_pred             HHHHHHHHhcCCC--eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCcc
Confidence            9999999998776  23333333321 12245556  7888888764  2332332     2567899999999999999


Q ss_pred             cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          199 NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       199 ~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      .+++.+++.++      +|+++|+|++|+.+..    ...+..     ..+++.|+||.++.+| ++||+++++
T Consensus       180 ~~~~~~~i~~~------~~~~vivD~a~~~~~~----~~~~~~-----~di~~~s~sK~~~~~g-g~g~l~~~~  237 (398)
T 2fyf_A          180 VAVAVRRPEGS------DDALVVIDATSGAGGL----PVDIAE-----TDAYYFAPQKNFASDG-GLWLAIMSP  237 (398)
T ss_dssp             EECCCCCCTTC------C-CEEEEECTTTTTTS----CCCGGG-----CSEEEECTTSTTCSCS-SEEEEEECH
T ss_pred             eecchHHhhhh------cCCeEEEEeccccCCc----ccCccc-----CcEEEEecCcccCCCC-ceEEEEECH
Confidence            99995555544      7999999999986432    112221     2388999999998886 599998853

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.76  E-value=1.2e-17  Score=157.15  Aligned_cols=200  Identities=12%  Similarity=0.052  Sum_probs=151.7

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC--------CCEEEeCChHHHHHHHHHHHhc---
Q 021547           64 AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA--------DDIYITLGCMEAVEIILTVITR---  132 (311)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~--------~~v~~t~g~~~a~~~~~~~l~~---  132 (311)
                      +..+.+.+...+..+ ...|...++..++++.+++|+.+.+|.+...        ...++|+|+|+++..++.+...   
T Consensus        92 ~~~~~~~~~~~~n~~-~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~  170 (481)
T 4e1o_A           92 PSLLGDMLADAINCL-GFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKI  170 (481)
T ss_dssp             HHHHHHHHHHHHCCC-CSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcc-cCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHH
Confidence            344555555555443 3478888899999999999999988875432        3678999999999887776642   


Q ss_pred             ----------------CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC------ccEEEE
Q 021547          133 ----------------LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN------TAAIVI  190 (311)
Q Consensus       133 ----------------~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~i~i  190 (311)
                                      ++ +.|+++.+.|..+...++..|.+++.++.+  .++.+|+++|+++++++      +.++++
T Consensus       171 ~~~~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~  247 (481)
T 4e1o_A          171 LEMKTSEPDADESSLNAR-LVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCA  247 (481)
T ss_dssp             HHHHHHCTTSCHHHHHTT-EEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             HHhhhcCcccccccccCC-eEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEE
Confidence                            45 799999999999999999999999999864  56789999999988653      567788


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          191 INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       191 ~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      +.++|++|.+-+   +++|+++|++||+|+++|++|+...+....... +..+  .....+..+++|+++.| ..+|+++
T Consensus       248 ~~~~t~~G~id~---l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi--~~aDsi~~~~hK~l~~p-~g~g~l~  321 (481)
T 4e1o_A          248 TLGTTGVCAFDC---LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGI--EYADSFTFNPSKWMMVH-FDCTGFW  321 (481)
T ss_dssp             EBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTG--GGCSEEEECHHHHSSCC-SSCEEEE
T ss_pred             ecCCCCCcCcCC---HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCc--ccCCEEEEChHHhcCCC-CceEEEE
Confidence            889999999877   999999999999999999999875332211111 1111  01126677999997776 5678888


Q ss_pred             eeCC
Q 021547          270 TNDP  273 (311)
Q Consensus       270 ~~~~  273 (311)
                      +.++
T Consensus       322 ~~~~  325 (481)
T 4e1o_A          322 VKDK  325 (481)
T ss_dssp             ESBH
T ss_pred             EeCH
Confidence            7653

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.76  E-value=1.6e-17  Score=155.84  Aligned_cols=223  Identities=9%  Similarity=-0.045  Sum_probs=133.1

Q ss_pred             hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHH
Q 021547           25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA------PMFGLPLARRAVAE   98 (311)
Q Consensus        25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~   98 (311)
                      ...|..+++.-.++     ....|.|-.+.      .++++.|+++|...+......+|+      ...-..++++...+
T Consensus        39 d~~~~~~~~~e~~r-----q~~~i~lias~------n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~  107 (490)
T 2a7v_A           39 DPEMWELLQREKDR-----QCRGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQR  107 (490)
T ss_dssp             CHHHHHHHHHHHHH-----HHHSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH-----HHcCceEECCC------CCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHH
Confidence            33466666543322     23556666543      236899999998877532211222      12223466644445


Q ss_pred             HHhhcCCCCCCCCC---EEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH--------HHHHcCcEEEEeecc-C
Q 021547           99 YLNRDLPYKLSADD---IYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES--------FAKRNHIEVRHFDLL-P  166 (311)
Q Consensus        99 ~l~~~~g~~~~~~~---v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~-~  166 (311)
                      ++.+.+|.  +.+.   .++++||++|+.+++.+++++| |+|+++.+.|.++..        .+...|..+..+++. .
T Consensus       108 ~~a~l~g~--~~~~~~~~v~~~sGt~An~~al~al~~pG-D~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd  184 (490)
T 2a7v_A          108 RALEAFDL--DPAQWGVNVQPYSGSPANLAVYTALLQPH-DRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN  184 (490)
T ss_dssp             HHHHHTTC--CTTTEEEECCCSSHHHHHHHHHHHHCCSC-EECCC-------------------------------CCBC
T ss_pred             HHHHHcCC--CcccCceEEeCCchHHHHHHHHHHHcCCC-CEecccCccccccccchhhhcchhHHHcCCeEEEEecccc
Confidence            55555553  3332   3455678999999999999999 999999998865321        233455444333332 1


Q ss_pred             CCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCC
Q 021547          167 ERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGS  244 (311)
Q Consensus       167 ~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~  244 (311)
                      ..++.+|++++++.+. .++++++++.++||+  ..+   +++|.++|+++|+++++|++|. ++.+.|..+.++..   
T Consensus       185 ~~~~~iD~d~le~~l~~~~~klIi~~~s~~~~--~~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~---  256 (490)
T 2a7v_A          185 PKTGLIDYNQLALTARLFRPRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH---  256 (490)
T ss_dssp             TTTCSBCHHHHHHHHHHHCCSEEEECCSSCCS--CCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGT---
T ss_pred             cccCCcCHHHHHHHHhhcCCcEEEEcCCCCCC--ccc---HHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCC---
Confidence            2457899999999875 478888888888875  445   8999999999999999999975 44444433334321   


Q ss_pred             CCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          245 IVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       245 ~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                        ..+++.|+||++  .|.|.|++++++.
T Consensus       257 --aDiv~~S~hK~l--~Gp~GG~i~~~~~  281 (490)
T 2a7v_A          257 --ADIVTTTTHKTL--RGARSGLIFYRKG  281 (490)
T ss_dssp             --CSEEEEESSGGG--CSCSCEEEEEECS
T ss_pred             --CCEEEECCcccC--ccccchheeeccc
Confidence              228899999986  4667799998753

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.76  E-value=2.5e-17  Score=162.17  Aligned_cols=171  Identities=11%  Similarity=0.024  Sum_probs=131.3

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE  167 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~  167 (311)
                      -+.++++.++++++.      + +.+++++|+++++.+++.+++++| |+|+++.|+|.++...+...|++++.++....
T Consensus       206 ~v~~~ee~la~l~G~------d-~~i~~~~Gtt~a~~~~i~al~~~G-D~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~  277 (755)
T 2vyc_A          206 AFGESEKYAARVFGA------D-RSWSVVVGTSGSNRTIMQACMTDN-DVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN  277 (755)
T ss_dssp             HHHHHHHHHHHHHTC------S-EEEEESSHHHHHHHHHHHHHCCTT-CEEEEESSCCHHHHHHHHHHCCEEEEECCCBC
T ss_pred             HHHHHHHHHHHHhCC------C-ceEEECCcHHHHHHHHHHHhcCCC-CEEEECCCchHHHHHHHHHcCCEEEEEeCCCC
Confidence            346777888887742      2 457889999999999999999999 99999999999998889999999999886532


Q ss_pred             CCcc----c-----CHHHHHhhcCC--Ccc--------EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 021547          168 RGWE----V-----DLEAVEALADE--NTA--------AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH  228 (311)
Q Consensus       168 ~~~~----~-----d~~~l~~~l~~--~~~--------~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~  228 (311)
                       +++    +     |++.|++++++  +++        ++++++| ||+|.+.+   +++|+++|++||+++++|++|+.
T Consensus       278 -~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~  352 (755)
T 2vyc_A          278 -RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYG  352 (755)
T ss_dssp             -TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCT
T ss_pred             -ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCch
Confidence             222    4     99999998753  344        8899998 79999988   99999999999999999999985


Q ss_pred             C-ccCCC--CCCcccc--cC-CCCCeEEEecCcccCCCCcce-eeEEEeeCC
Q 021547          229 L-AFGST--PYIPMGV--FG-SIVPVITLGSISKRWIVPGWR-FGWLATNDP  273 (311)
Q Consensus       229 ~-~~~~~--~~~~~~~--~~-~~~~~i~i~s~sK~~~~~G~r-~G~i~~~~~  273 (311)
                      . .+++.  +..++..  .+ ...++|++.|+||+  ++|.+ .|++++++.
T Consensus       353 ~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~--L~g~~~g~~i~~~~~  402 (755)
T 2vyc_A          353 YARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREG  402 (755)
T ss_dssp             TGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTS--SSCCTTCEEEEEECC
T ss_pred             hcccCcccCCcchhcCCcCCccCCCeEEEECcccc--ccCcCCeeeeeecCc
Confidence            3 33321  1223211  12 24468899999998  45666 566666554

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.75  E-value=1.1e-17  Score=163.44  Aligned_cols=173  Identities=13%  Similarity=0.050  Sum_probs=131.2

Q ss_pred             CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH-HHHcCcEEEEee
Q 021547           85 PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF-AKRNHIEVRHFD  163 (311)
Q Consensus        85 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~-~~~~g~~~~~~~  163 (311)
                      +..-+.++++.++++++.      + ..+++++|+++++.+++.+++++| |+|+++.++|.++... ++..|++++.++
T Consensus       171 ~~~~i~e~e~~lA~~~ga------e-~~i~v~nGtt~an~~ai~al~~pG-D~VLv~~~~H~S~~~~~~~l~Ga~~v~v~  242 (730)
T 1c4k_A          171 HEGPAVAAEKHAARVYNA------D-KTYFVLGGSSNANNTVTSALVSNG-DLVLFDRNNHKSVYNSALAMAGGRPVYLQ  242 (730)
T ss_dssp             TBTHHHHHHHHHHHHTTC------S-EEEEESSHHHHHHHHHHHHHCCTT-CEEEEETTCCHHHHHHHTTTTCCEEEEEC
T ss_pred             ChHHHHHHHHHHHHHHCC------C-cEEEECCHHHHHHHHHHHHhcCCC-CEEEEcCCchHHHHHHHHHHCCCEEEEEe
Confidence            334467899999998842      2 347888998999999999999999 9999999999988887 888999999887


Q ss_pred             ccCCCC----cccCHHHH-----HhhcCCC------c----cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEec
Q 021547          164 LLPERG----WEVDLEAV-----EALADEN------T----AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE  224 (311)
Q Consensus       164 ~~~~~~----~~~d~~~l-----~~~l~~~------~----~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~  224 (311)
                      .... .    +.+|+++|     +++++++      +    +++++++| ||+|.+.+   +++|+++|+++|+++|+|+
T Consensus       243 ~~~~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDe  317 (730)
T 1c4k_A          243 TNRN-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDS  317 (730)
T ss_dssp             EEEC-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEEC
T ss_pred             CCcc-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEc
Confidence            6432 2    23688888     8888765      4    88999998 58999988   9999999999999999999


Q ss_pred             cccC-CccCCC-C-CCccc--ccC-CCCCeEEEecCcccCCCCcceee-EEEeeC
Q 021547          225 VYGH-LAFGST-P-YIPMG--VFG-SIVPVITLGSISKRWIVPGWRFG-WLATND  272 (311)
Q Consensus       225 ay~~-~~~~~~-~-~~~~~--~~~-~~~~~i~i~s~sK~~~~~G~r~G-~i~~~~  272 (311)
                      +|+. +.|++. + ..++.  .+. ++.+++++.|+||.  ++|++.| ++++++
T Consensus       318 Ah~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~--L~g~~~gg~I~v~~  370 (730)
T 1c4k_A          318 AWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQ--QAGFSQTSQIHKKD  370 (730)
T ss_dssp             TTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHH--SSCCTTCEEEEEEC
T ss_pred             ccccccccCcccCCcCcccccccCCCCCCEEEEECCCCC--CCCCCCEEEEEecc
Confidence            9974 334321 1 11221  112 23467999999998  4566654 554544

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.74  E-value=4.6e-17  Score=148.31  Aligned_cols=168  Identities=14%  Similarity=0.208  Sum_probs=123.4

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH--HHHHHcCc--EEEEeeccC
Q 021547           91 LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE--SFAKRNHI--EVRHFDLLP  166 (311)
Q Consensus        91 ~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~--~~~~~~g~--~~~~~~~~~  166 (311)
                      ++.+.+++.+.+.+|..   +.+++|+|+++++++++..+ .+| |+|++..+.|.++.  ..++..|.  +++.++...
T Consensus        35 ~~~~~~~~~l~~~~~~~---~~v~~~~sgt~a~~~~~~~~-~~g-d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  109 (379)
T 3ke3_A           35 EVMNDLLSNLKTVYNAE---AAVIIPGSGTYGMEAVARQL-TID-EDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAER  109 (379)
T ss_dssp             HHHHHHHHHHHHHHTCS---EEEEEESCHHHHHHHHHHHH-CTT-CEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEE
T ss_pred             HHHHHHHHHHHHHhCCC---CEEEEcCChhHHHHHHHHhC-CCC-CeEEEEeCCchhHHHHHHHHHhCCCCceEEEeccc
Confidence            44444444444444432   67899999999999988655 689 99999999997653  45555664  677776532


Q ss_pred             C------CC-cccCHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc
Q 021547          167 E------RG-WEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP  238 (311)
Q Consensus       167 ~------~~-~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~  238 (311)
                      .      .. ..+|++++++.++ ++++++++++++||+|..++.+++++|.++|++||+++|+|++++ .   +. +..
T Consensus       110 ~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~~-~~~  184 (379)
T 3ke3_A          110 TEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---CV-WLD  184 (379)
T ss_dssp             SSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---TC-CCC
T ss_pred             cccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---Cc-ccc
Confidence            1      11 2479999999885 478999999999999999999999999999999999999999986 2   22 222


Q ss_pred             ccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          239 MGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       239 ~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      +..+.   ..+++.|++|.++.+ .++|+++++.
T Consensus       185 ~~~~~---~d~~~~s~~K~l~~~-~g~g~~~~~~  214 (379)
T 3ke3_A          185 MKELG---IDVLISAPQKGWSST-PCAGLVMLSA  214 (379)
T ss_dssp             HHHHT---CSEEEECTTTTTCSC-CCEEEEEECH
T ss_pred             ccccC---CCEEEecchhhcCCC-CceEEEEECH
Confidence            22222   238889999987554 4589988753

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.73  E-value=7.1e-17  Score=151.52  Aligned_cols=199  Identities=12%  Similarity=0.017  Sum_probs=149.2

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-------CCEEEeCChHHHHHHHHHHHhc-----
Q 021547           65 AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-------DDIYITLGCMEAVEIILTVITR-----  132 (311)
Q Consensus        65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-------~~v~~t~g~~~a~~~~~~~l~~-----  132 (311)
                      ..+.+.+...+..+. ..|...++..++++.+.+|+.+.+|.+...       ...++|+|+|+++..++.+...     
T Consensus        88 ~~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~  166 (475)
T 3k40_A           88 AIVADMLSGAIACIG-FTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKE  166 (475)
T ss_dssp             HHHHHHHHHHHCCCS-SSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCccc-cCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHH
Confidence            344455555554433 368777889999999999999988875421       3688999999998877776631     


Q ss_pred             --------------CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC------ccEEEEeC
Q 021547          133 --------------LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN------TAAIVIIN  192 (311)
Q Consensus       133 --------------~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~i~i~~  192 (311)
                                    ++ +.|+++...|..+...++..|.+++.++.+  .++ +|+++|++.++++      +.+++++.
T Consensus       167 ~~~~~~~~~~~~~~~~-~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~  242 (475)
T 3k40_A          167 VKELHPEWDEHTILGK-LVGYCSDQAHSSVERAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTL  242 (475)
T ss_dssp             HHHHCTTSCHHHHHHH-EEEEEETTSCHHHHHHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred             hhccCcccccccccCC-eEEEECCCchHHHHHHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEe
Confidence                          34 689999999999999999999999999874  456 9999999988653      56778888


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-ccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      ++|++|.+.+   +++|+++|++||+|+++|++|+...+....... +..+  .....+..+++|+++.| ..+|++++.
T Consensus       243 ~~t~~G~~~~---l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi--~~~Ds~~~~~hK~l~~p-~g~g~l~~~  316 (475)
T 3k40_A          243 GTTNSCAFDY---LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGI--ESADSFNFNPHKWMLVN-FDCSAMWLK  316 (475)
T ss_dssp             SCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTG--GGCSEEEECHHHHSSCC-SSCEEEEES
T ss_pred             cCCCCcCcCC---HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCc--ccCCEEEECchhccCCC-CceEEEEEe
Confidence            9999999987   999999999999999999999874332111111 1111  01136778999986655 668888887


Q ss_pred             CCC
Q 021547          272 DPN  274 (311)
Q Consensus       272 ~~~  274 (311)
                      ++.
T Consensus       317 ~~~  319 (475)
T 3k40_A          317 DPS  319 (475)
T ss_dssp             SGG
T ss_pred             CHH
Confidence            654

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.73  E-value=2.3e-17  Score=154.73  Aligned_cols=248  Identities=13%  Similarity=0.003  Sum_probs=159.8

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS---MFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLG  118 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g  118 (311)
                      .+++.+|||..|......+ ..+|.+.+++.+++...   ....|.. ....++++.+++.+.+..+.  ..++|++++|
T Consensus        60 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~--~~~~v~f~~s  135 (472)
T 1ohv_A           60 VDGNRMLDLYSQISSIPIG-YSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPK--GMSQLITMAC  135 (472)
T ss_dssp             TTSCEEEESSHHHHTCSSC-BTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCT--TCCEEEEESS
T ss_pred             CCCCEEEECCCCHhhcccC-CCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCC--CcCEEEEeCC
Confidence            3578899998875432211 26899999998875321   1113433 34578999999988765532  4678999999


Q ss_pred             hHHHHHHHHHHHh-------c------------------CC--CCEEEecCCCCcchHHHH-HHcCcE--------E---
Q 021547          119 CMEAVEIILTVIT-------R------------------LG--AANILLPRPGWPFYESFA-KRNHIE--------V---  159 (311)
Q Consensus       119 ~~~a~~~~~~~l~-------~------------------~g--~d~Vl~~~p~~~~~~~~~-~~~g~~--------~---  159 (311)
                      +++|++.+++.+.       .                  +|  .++|++.++.|.++...+ ...|..        .   
T Consensus       136 GseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~  215 (472)
T 1ohv_A          136 GSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDW  215 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCC
T ss_pred             chhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCC
Confidence            9999999998874       1                  24  389999999998765444 232321        0   


Q ss_pred             EEeeccCC--C---C--c-----ccCHHHHHhhcCC------CccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEE
Q 021547          160 RHFDLLPE--R---G--W-----EVDLEAVEALADE------NTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILV  220 (311)
Q Consensus       160 ~~~~~~~~--~---~--~-----~~d~~~l~~~l~~------~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~l  220 (311)
                      ..+++...  .   .  +     ..|++.|++.+++      ++++|++...+|++|. ..+++.+++|.++|++||+++
T Consensus       216 ~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~ll  295 (472)
T 1ohv_A          216 PIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAF  295 (472)
T ss_dssp             CEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEE
T ss_pred             cccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEE
Confidence            11121100  0   0  0     1267888888865      6777777666888996 568999999999999999999


Q ss_pred             EEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCch
Q 021547          221 IADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTL  299 (311)
Q Consensus       221 i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  299 (311)
                      |+||+|.++.+.|. ...+..++.. ..+-+.||||.+ +.|   ||++ + ++       +. .+... ...+.+.+++
T Consensus       296 i~DEv~~g~g~~g~-~~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~-~~-------~~-~~~~~~~~~T~~~~~~  359 (472)
T 1ohv_A          296 LVDEVQTGGGSTGK-FWAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-K-EE-------FR-PNAPYRIFNTWLGDPS  359 (472)
T ss_dssp             EEECTTTTTTTTSS-SSGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-C-GG-------GS-CSSSSSSCCSSSSCHH
T ss_pred             EEeCcccCCCCCCC-chhccccCCC-CCCCEEEEcccc-ccC---CccC-c-hh-------hc-ccccccccCccCccHH
Confidence            99999997665543 2233333211 002234899985 445   7765 2 21       21 11222 2334577899


Q ss_pred             hHHHHHhhhh
Q 021547          300 IQVCEMFLLV  309 (311)
Q Consensus       300 ~q~~~~~~l~  309 (311)
                      +|+++.+.|+
T Consensus       360 ~~aaa~aal~  369 (472)
T 1ohv_A          360 KNLLLAEVIN  369 (472)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9998887664

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.70  E-value=2e-16  Score=153.70  Aligned_cols=172  Identities=15%  Similarity=0.076  Sum_probs=127.2

Q ss_pred             CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeec
Q 021547           85 PMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL  164 (311)
Q Consensus        85 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~  164 (311)
                      +..-+.++++.+|++++.       ...+++++|++.|+.+++.+++++| |+|+++.++|.++...+...|++++.++.
T Consensus       193 ~~g~i~eaE~~lA~~fGa-------~~a~~v~nGts~An~~ai~al~~pG-D~VLv~r~~H~S~~~~l~lsGa~pv~v~~  264 (715)
T 3n75_A          193 HSGPHKEAEQYIARVFNA-------DRSYMVTNGTSTANKIVGMYSAPAG-STILIDRNCHKSLTHLMMMSDVTPIYFRP  264 (715)
T ss_dssp             TBTHHHHHHHHHHHHHTC-------SEEEEESSHHHHHHHHHHHHHCCTT-CEEEEESSCCHHHHHHHHHSCCEEEEECC
T ss_pred             CcHHHHHHHHHHHHHhCC-------CCceEECcHHHHHHHHHHHHhCCCC-CEEEECCCccHHHHHHHHHcCCEEEEEec
Confidence            333457899999999942       2346677887899999999999999 99999999999999999999999999986


Q ss_pred             cCCCCccc---------CHHHHHhhcCC--Ccc---EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547          165 LPERGWEV---------DLEAVEALADE--NTA---AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA  230 (311)
Q Consensus       165 ~~~~~~~~---------d~~~l~~~l~~--~~~---~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~  230 (311)
                      .. +.+++         |++.|++++++  +++   ++++++| |++|.+++   +++|.++|+++  .+++|++|+...
T Consensus       265 ~~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~--~livDEAH~~~~  337 (715)
T 3n75_A          265 TR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVK--SIHFDSAWVPYT  337 (715)
T ss_dssp             CB-CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCS--EEEEECTTCTTG
T ss_pred             cc-cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcC--cEEEcccccccc
Confidence            53 34443         89999998863  334   7999999 99999999   77888888765  379999998643


Q ss_pred             -cCCC-C-CCcccccCCCCC-eEEEecCcccCCCCcc-eeeEEEeeCC
Q 021547          231 -FGST-P-YIPMGVFGSIVP-VITLGSISKRWIVPGW-RFGWLATNDP  273 (311)
Q Consensus       231 -~~~~-~-~~~~~~~~~~~~-~i~i~s~sK~~~~~G~-r~G~i~~~~~  273 (311)
                       |++. + ...+..-...+. +++++|+||+++  |+ ..|++++++.
T Consensus       338 ~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~  383 (715)
T 3n75_A          338 NFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGD  383 (715)
T ss_dssp             GGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESC
T ss_pred             ccCCccccccccccCcCCCEEEEEEeccccccc--CCCCeeEEEeCch
Confidence             4321 1 112211001123 367999999954  44 3588887654

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.68  E-value=7.7e-16  Score=142.93  Aligned_cols=194  Identities=23%  Similarity=0.298  Sum_probs=125.3

Q ss_pred             eecCCCCCCCCCCCCCcHHHHHHH--HHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           48 IPLGHGDPAAFPCFRTAAVAEDAI--VDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        48 i~~~~g~p~~~~~~~~~~~~~~a~--~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      ..++.|.++    ...|+.+.+++  .+....  +..|.+  ..|..++.+.+.+++.+.+|  .+.+++++++|++.++
T Consensus        67 ~~~~~g~~~----~~~p~~v~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~la~~~g--~~~~~i~~~~g~taa~  138 (438)
T 1wyu_A           67 AFLGGGVRS----HHVPPVVQALAARGEFLTA--YTPYQPEVSQGVLQATFEYQTMIAELAG--LEIANASMYDGATALA  138 (438)
T ss_dssp             CCCCSSCCC----CCCCHHHHHHHTSHHHHHC--CSCCSGGGCHHHHHHHHHHHHHHHHHHT--SSEECSCBSSHHHHHH
T ss_pred             cccCCCccC----CcCcHHHHHHHhcchhhhc--CCCCcchhhhhHHHHHHHHHHHHHHHhC--CCccceEEeCcHHHHH
Confidence            345555533    45566664444  222221  123321  33544444444444444344  3456789999999555


Q ss_pred             HHHHHHH-hcCCCCEEEecCCCCcchHHHH----HHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCc
Q 021547          124 EIILTVI-TRLGAANILLPRPGWPFYESFA----KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCG  198 (311)
Q Consensus       124 ~~~~~~l-~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG  198 (311)
                      +++..++ .++| |+|+++.+.|+.+...+    +..|++++.++.   +++.+|+++    ++++++++++++| ||||
T Consensus       139 ea~~~a~~~~~g-d~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~---~~~~~d~~~----i~~~t~~v~i~~p-n~tG  209 (438)
T 1wyu_A          139 EGVLLALRETGR-MGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL---EGGRTPLPE----VGEEVGAVVVQNP-NFLG  209 (438)
T ss_dssp             HHHHHHHHHHTC-CEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC---BTTBCCCCC----CCTTEEEEEEESS-CTTS
T ss_pred             HHHHHHHhcCCC-CEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC---cCCccCHHH----hCCCeEEEEEECC-CCCe
Confidence            5444443 4688 99999999999887544    558999999986   235677665    6778999999999 9999


Q ss_pred             cCCCHHHHHHHHHHHHHhCCEEEEecc---ccCCccCCCCCCcccccCCCCCeEEEecCcccCC----CCcceeeEEEee
Q 021547          199 NVLTYQHLQKIAETARKLGILVIADEV---YGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWI----VPGWRFGWLATN  271 (311)
Q Consensus       199 ~~~~~~~l~~l~~l~~~~~~~li~D~a---y~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~----~~G~r~G~i~~~  271 (311)
                      .+.+   +++|.++|+++|+++|+|..   ++.+     .. + ..+.   ..+++.| +|.|+    +.|.++||++++
T Consensus       210 ~~~~---l~~i~~la~~~g~~vivd~d~~a~g~~-----~~-~-~~~g---~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~  275 (438)
T 1wyu_A          210 ALED---LGPFAEAAHGAGALFVAVADPLSLGVL-----KP-P-GAYG---ADIAVGD-GQSLGLPMGFGGPHFGFLATK  275 (438)
T ss_dssp             BCCC---HHHHHHHHHHTTCEEEEECCTTGGGTB-----CC-H-HHHT---CSEEEEE-CTTTTCCCGGGCSCCEEEEEC
T ss_pred             EEec---HHHHHHHHHHcCCEEEEEechhhccCc-----CC-C-ccCC---CCEEEEC-CcccCCCccCCCCCeeEEEEc
Confidence            9997   99999999999999996632   3321     11 1 2222   1266666 66554    456799999986


Q ss_pred             C
Q 021547          272 D  272 (311)
Q Consensus       272 ~  272 (311)
                      +
T Consensus       276 ~  276 (438)
T 1wyu_A          276 K  276 (438)
T ss_dssp             G
T ss_pred             H
Confidence            4

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.46  E-value=6.5e-13  Score=119.90  Aligned_cols=191  Identities=10%  Similarity=0.024  Sum_probs=128.8

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC---C--CC-----CCCcHHHHHHHHHHHhhcCCCCCC-CCC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC---Y--AP-----MFGLPLARRAVAEYLNRDLPYKLS-ADD  112 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~---Y--~~-----~~g~~~lr~~ia~~l~~~~g~~~~-~~~  112 (311)
                      ..++++|+-|-      .+.++.|+++|.+.+.....+.   |  ..     ..-+.+.|+.++++++      +. +++
T Consensus         3 ~~~~~~f~pgp------t~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~------~~~~~~   70 (361)
T 3m5u_A            3 AMRKINFSAGP------STLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYE------LNDDYE   70 (361)
T ss_dssp             -CCCEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHT------CCTTEE
T ss_pred             ccceEeecCCC------CCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhC------CCCCce
Confidence            45778888875      5778999999998764211001   1  11     1224567777888884      33 447


Q ss_pred             EEE-eCChHHHHHHHHHHHhcCCCCEEE-ecCCCCc-chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEE
Q 021547          113 IYI-TLGCMEAVEIILTVITRLGAANIL-LPRPGWP-FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIV  189 (311)
Q Consensus       113 v~~-t~g~~~a~~~~~~~l~~~g~d~Vl-~~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~  189 (311)
                      |++ |+|+|+++++++..+. +| |+++ +....|. .....++..|.++..++.+....+..+++.  + ++++++++.
T Consensus        71 v~f~t~~~T~a~n~~~~~~~-~~-~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~  145 (361)
T 3m5u_A           71 VLFLQGGASLQFAMIPMNLA-LN-GVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAY  145 (361)
T ss_dssp             EEEESSHHHHHHHHHHHHHC-CS-SCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEE
T ss_pred             EEEEcCcHHHHHHHHHHhcC-CC-CeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEE
Confidence            887 9999999999999998 78 7653 2222332 234566778999999987543222245555  3 888999999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      +++..|.||..++.        +++ +|+++++|.+++..    ..+..+..+     .+++.|.+|.+|.+|  +|+++
T Consensus       146 ~~~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~g----~~~id~~~~-----d~~~~s~~K~~gp~G--~g~l~  205 (361)
T 3m5u_A          146 ICSNNTIYGTQYQN--------YPK-TKTPLIVDASSDFF----SRKVDFSNI-----ALFYGGVQKNAGISG--LSCIF  205 (361)
T ss_dssp             EESEETTTTEECSS--------CCC-CSSCEEEECGGGTT----SSCCCCTTE-----EEEEEETTTTSSCTT--CEEEE
T ss_pred             EeCCCCCcceeCCc--------ccc-cCCEEEEEcccccC----CCCCCcccC-----CEEEEechhccCCCc--cEEEE
Confidence            99888899998762        233 49999999999862    223333322     278889999998777  56666


Q ss_pred             ee
Q 021547          270 TN  271 (311)
Q Consensus       270 ~~  271 (311)
                      +.
T Consensus       206 ~~  207 (361)
T 3m5u_A          206 IR  207 (361)
T ss_dssp             EE
T ss_pred             Ec
Confidence            64

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.45  E-value=1.4e-13  Score=126.54  Aligned_cols=178  Identities=12%  Similarity=-0.028  Sum_probs=125.2

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC----CCCEEEecCCCCcchHHHHHHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL----GAANILLPRPGWPFYESFAKRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~----g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~  163 (311)
                      +...+.+.+..++.+..|.+. ....++++|+|++..+.+.+.+++    + +.|+++..+|.++...+...|++++.++
T Consensus        95 ~~~~~e~~~~~~~~~~lGlp~-~~~~~lV~GaT~~~~a~~L~aar~~~~~~-~~viv~r~aHkSv~kAl~l~Gl~p~~v~  172 (450)
T 3bc8_A           95 LLNKITNSLVLNVIKLAGVHS-VASCFVVPMATGMSLTLCFLTLRHKRPKA-KYIIWPRIDQKSCFKSMVTAGFEPVVIE  172 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTT-CCEEEEESSCHHHHHHHHHHHHHHHCTTC-CEEEEECCCCHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCCCC-CceEEEECCHHHHHHHHHHHHcchhhcCC-CEEEEECCcHHHHHHHHHHcCCeeEEEE
Confidence            455677888888887777643 234688888875544444444443    7 8999999999999999999999999987


Q ss_pred             ccC-CCCcccCHHHHHhhcCC---CccEEEEeCCC-CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc
Q 021547          164 LLP-ERGWEVDLEAVEALADE---NTAAIVIINPC-NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP  238 (311)
Q Consensus       164 ~~~-~~~~~~d~~~l~~~l~~---~~~~i~i~~p~-nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~  238 (311)
                      ..+ .+.+.+|++.|++++++   +.+++++.+|+ +.+|.+-+   +++|+++|++||++++||+||+.......+. +
T Consensus       173 ~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l-~  248 (450)
T 3bc8_A          173 NVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSSKCMHL-I  248 (450)
T ss_dssp             CEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHH-H
T ss_pred             eeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchhhhhhHhH-H
Confidence            643 34678999999998864   35666777764 56677777   9999999999999999999999633110011 1


Q ss_pred             ccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          239 MGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       239 ~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      -..+....-..++.|.+|++ ..-...+++.+.+
T Consensus       249 ~~a~~~~~AD~~v~S~HK~l-~a~~~~~~l~~rd  281 (450)
T 3bc8_A          249 QQGARVGRIDAFVQSLDKNF-MVPVGGAIIAGFN  281 (450)
T ss_dssp             HHHHHHSCCCEEEEEHHHHH-SCCSSCEEEEESC
T ss_pred             HHHhcccCCCEEEECCccCC-CchhccEEEEecC
Confidence            01110011126888999995 4445567776654

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.45  E-value=1.6e-13  Score=125.07  Aligned_cols=185  Identities=11%  Similarity=-0.037  Sum_probs=128.2

Q ss_pred             CCCcHHHHHHHHHHHhcC---CC-----CCCC--CCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEE-eCChHHHHHHHHH
Q 021547           61 FRTAAVAEDAIVDSVRSS---MF-----NCYA--PMFGLPLARRAVAEYLNRDLPYKLSA-DDIYI-TLGCMEAVEIILT  128 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~---~~-----~~Y~--~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~-t~g~~~a~~~~~~  128 (311)
                      .+.++.|+++|.+.+...   ..     ...+  ...-+.+.|+.++++++      +.. ++|++ |+|+|+++++++.
T Consensus        36 t~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~------~~~~~evif~t~~~T~a~n~ai~  109 (386)
T 3qm2_A           36 AMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLN------IPSNYKVLFCHGGGRGQFAGVPL  109 (386)
T ss_dssp             CCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHT------CCTTEEEEEEESCTTHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEEcCCchHHHHHHHH
Confidence            467899999997765321   00     0111  13467889999999994      332 46887 6899999999999


Q ss_pred             HHhcCCCCEEEecCCCCcc--hHHHHHHcCcEEEEeecc-CCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccC-CCHH
Q 021547          129 VITRLGAANILLPRPGWPF--YESFAKRNHIEVRHFDLL-PERGWEVDLEAVEALADENTAAIVIINPCNPCGNV-LTYQ  204 (311)
Q Consensus       129 ~l~~~g~d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~-~~~~  204 (311)
                      .+.++| |+|++....+..  +...++..| ++..++.+ ...+..++++.++..+++++++|.+++..|.||.. .|  
T Consensus       110 ~l~~~g-d~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~p--  185 (386)
T 3qm2_A          110 NLLGDK-TTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDE--  185 (386)
T ss_dssp             HHCTTC-CEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCC--
T ss_pred             hccCCC-CeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCc--
Confidence            999999 998755444433  334566778 88888764 12333367788888899999999988888899996 66  


Q ss_pred             HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                       +++|.     +|+++++|.+++.    |..+..+..++     +.+.|.+|.+|.+|  +|++++..
T Consensus       186 -i~~i~-----~g~~~~vDa~qs~----g~~pidv~~~~-----~~~~s~hK~lGP~G--~g~l~v~~  236 (386)
T 3qm2_A          186 -TPDFG-----PEVVVTADFSSTI----LSAPLDVSRYG-----VIYAGAQKNIGPAG--LTLVIVRE  236 (386)
T ss_dssp             -CCCCC-----TTCCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCTT--EEEEEEEG
T ss_pred             -hhhhc-----CCCEEEEEccccc----CCCCCCccccC-----EEEEecccccCCCc--cEEEEECH
Confidence             55553     7999999999986    22334444442     46689999998666  67776654

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.43  E-value=1.5e-12  Score=120.73  Aligned_cols=235  Identities=14%  Similarity=0.099  Sum_probs=150.5

Q ss_pred             CCCCeeecCCCC-CCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           43 DPRPVIPLGHGD-PAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~-p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      +++.+|||..|. +...  --.+|.+.+++.++++..... ..+.....++.+.+++.+    +   ..+.|+++++|++
T Consensus        85 dG~~ylD~~~g~~~~~l--GH~hp~v~~Av~~q~~~~~~~-~~~~~~~~~lae~l~~~~----p---~~~~v~f~~SGsE  154 (454)
T 4ao9_A           85 DGHRYADFIAEYTAGVY--GHSAPEIRDAVIEAMQGGINL-TGHNLLEGRLARLICERF----P---QIEQLRFTNSGTE  154 (454)
T ss_dssp             TCCEEEESSGGGGTTTT--CSCCHHHHHHHHHHHHTCSCC-CSEESSHHHHHHHHHHHS----T---TCSEEEEESSHHH
T ss_pred             CCCEEEEccccHHhhcc--cCCCHHHHHHHHHHHhcCCCc-cCCcHHHHHHHHHHHHhC----C---CCCEEEEeCchHH
Confidence            478889987662 2211  226799999999998754321 222334455666666555    2   3578999999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHH------HcCcEEEEeeccCCCCcccCHHHHHhhcCC---CccEEEEe
Q 021547          122 AVEIILTVITR-LGAANILLPRPGWPFYESFAK------RNHIEVRHFDLLPERGWEVDLEAVEALADE---NTAAIVII  191 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~  191 (311)
                      |++.+++.... .|+++|+....+|.+......      ........+|.       -|.+.+++.+..   ++.++++.
T Consensus       155 A~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAavIvE  227 (454)
T 4ao9_A          155 ANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVVLVE  227 (454)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEEEEC
T ss_pred             HHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEEEec
Confidence            99999887753 344789988888875321110      01112233322       277888877653   44555555


Q ss_pred             CCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          192 NPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       192 ~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      ......|.+ .+++.+++|.++|++||+++|.||++.+  ..|.. .....+.-.++++   +++|.++ .|+.+|.+++
T Consensus       228 Pv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~-~a~e~~gv~PDi~---t~gK~lg-gG~Piga~~~  300 (454)
T 4ao9_A          228 PMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPH-GLANKLGIRSDLT---TLGKYIG-GGMSFGAFGG  300 (454)
T ss_dssp             SEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTT-CHHHHHTCCCSEE---EEEGGGG-TTSSCEEEEE
T ss_pred             cccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCccc-cchhccCCCCcEE---EeccccC-CCCcceeeee
Confidence            445566754 5677799999999999999999999974  22221 1122333333444   7889964 5899999988


Q ss_pred             eCCCCccchhhHHHHHhhh-----hccccCCCchhHHHHHhhhh
Q 021547          271 NDPNGVLQKSGIVGSIKAC-----LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ..        ++++.+...     ...+++.+|++.+++.+.|+
T Consensus       301 ~~--------ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~  336 (454)
T 4ao9_A          301 RA--------DVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLT  336 (454)
T ss_dssp             CH--------HHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             HH--------HHHHHHhhccCCccccCCCCCCHHHHHHHHHHHH
Confidence            53        466665432     23456788998888777664

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.41  E-value=1.1e-12  Score=119.80  Aligned_cols=180  Identities=16%  Similarity=0.090  Sum_probs=121.3

Q ss_pred             HHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC---CCCEEEecCCCCcchHHHHHHcCcEEEEeeccC-CCCcc
Q 021547           96 VAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL---GAANILLPRPGWPFYESFAKRNHIEVRHFDLLP-ERGWE  171 (311)
Q Consensus        96 ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~---g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~  171 (311)
                      +.+|++. .|++. ....++++|+|.++.+++.+.+++   |.|+||++..+|.++...+...|+++++++... .+...
T Consensus       122 ~ld~L~~-~G~~~-~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~  199 (501)
T 3hl2_A          122 VLDIIKL-AGVHT-VANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELR  199 (501)
T ss_dssp             HHHHHHH-TTCTT-CCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEE
T ss_pred             HHHHHHH-cCCCC-CCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccC
Confidence            4455554 57663 335889999997777666666653   339999999999999999999999999998743 23578


Q ss_pred             cCHHHHHhhcCC---CccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc-cCCCCCCcccccCCCC
Q 021547          172 VDLEAVEALADE---NTAAIVIINP-CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA-FGSTPYIPMGVFGSIV  246 (311)
Q Consensus       172 ~d~~~l~~~l~~---~~~~i~i~~p-~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~-~~~~~~~~~~~~~~~~  246 (311)
                      +|++.+++++++   +.++++++++ .|..|..-+   +++|+++|++||+++++|+||+... +...-+.....+.  .
T Consensus       200 id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~G--r  274 (501)
T 3hl2_A          200 TDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVG--R  274 (501)
T ss_dssp             ECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHS--C
T ss_pred             CCHHHHHHHHHhcCCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcC--C
Confidence            999999998864   3344454554 454445556   9999999999999999999999743 2111011111111  0


Q ss_pred             CeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547          247 PVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       247 ~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  290 (311)
                      -.+++.|.+|.+..| +..|.+...++       ++++++...+
T Consensus       275 AD~vVqS~HK~llvp-IGG~ii~~~d~-------e~l~~~~~~y  310 (501)
T 3hl2_A          275 IDAFVQSLDKNFMVP-VGGAIIAGFND-------SFIQEISKMY  310 (501)
T ss_dssp             CCEEEEEHHHHHCCC-SSCEEEEESCH-------HHHHHHHHTS
T ss_pred             CcEEEecccccceee-cCceEEEeCCH-------HHHHHHHHhC
Confidence            237889999997665 22234444443       3566654443

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.40  E-value=1.7e-12  Score=117.62  Aligned_cols=185  Identities=10%  Similarity=-0.015  Sum_probs=130.7

Q ss_pred             CCCCcHHHHHHHHHHHhcC---CCCCC--CC-----CCCcHHHHHHHHHHHhhcCCCCCCC-CCEEE-eCChHHHHHHHH
Q 021547           60 CFRTAAVAEDAIVDSVRSS---MFNCY--AP-----MFGLPLARRAVAEYLNRDLPYKLSA-DDIYI-TLGCMEAVEIIL  127 (311)
Q Consensus        60 ~~~~~~~~~~a~~~~~~~~---~~~~Y--~~-----~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~-t~g~~~a~~~~~  127 (311)
                      ..+.|+.|.++|.+.+...   ....+  ..     ..-+.+.|+.++++++      +.. ++|++ |+|+|+++++++
T Consensus        21 ~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~------~~~~~evif~t~~~T~a~n~a~   94 (377)
T 3e77_A           21 QSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA------VPDNYKVIFLQGGGCGQFSAVP   94 (377)
T ss_dssp             SCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHT------CCTTEEEEEESSHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCCeEEEEcCchHHHHHHHH
Confidence            4788999999999887521   11011  11     1123567777787774      233 56888 589999999999


Q ss_pred             HHHhcC--CCCEEEecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCH
Q 021547          128 TVITRL--GAANILLPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTY  203 (311)
Q Consensus       128 ~~l~~~--g~d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~  203 (311)
                      ..+..+  | |+|++...++..  +...++..|..++.++.+  .++..+++.++..++++++++.+++..|.||...| 
T Consensus        95 ~~l~~~~~G-d~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~--~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~p-  170 (377)
T 3e77_A           95 LNLIGLKAG-RCADYVVTGAWSAKAAEEAKKFGTINIVHPKL--GSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFD-  170 (377)
T ss_dssp             HHHGGGSTT-CEEEECCCSHHHHHHHHHHTTTSEEEECSCCC--SSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECS-
T ss_pred             HhccCCCCC-CeEEEEECCHHHHHHHHHHHHhCCceEEeccC--CCcCCCCChHHhccCCCccEEEEeCccCchheEch-
Confidence            999875  8 999877665543  234566778777666543  34456777777788889999999988899999998 


Q ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          204 QHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       204 ~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                        +     +|+++|+++++|.+++.    |..+..+..++     +.+.|.+|.+|.+|  +|++++..
T Consensus       171 --i-----i~~~~~~~~~vD~~q~~----g~~~id~~~~~-----~~~~s~~K~~gp~G--~g~l~~~~  221 (377)
T 3e77_A          171 --F-----IPDVKGAVLVCDMSSNF----LSKPVDVSKFG-----VIFAGAQKNVGSAG--VTVVIVRD  221 (377)
T ss_dssp             --S-----CCCCTTCCEEEECTTTT----TSSCCCGGGCS-----EEEEEGGGTTSCTT--CEEEEEET
T ss_pred             --h-----hhccCCCEEEEEccccc----CCCCCchhhcC-----EEEEecccccCCCc--cEEEEEcH
Confidence              3     46788999999999986    22333444332     57789999998777  56666654

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.36  E-value=3.3e-11  Score=111.98  Aligned_cols=248  Identities=19%  Similarity=0.191  Sum_probs=151.4

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC--CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC--YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~--Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      +++.+|||..|.-.. ..--.+|.+.+++.+++.......  +.+.    +....+++.+.+..+ .-..+.++++++|+
T Consensus        62 dG~~ylD~~~g~~~~-~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~----~~~~~lae~L~~~~p-~~~~~~v~f~~sGs  135 (456)
T 4atq_A           62 DGNSFIDLGSGIAVT-SVGASDPAVVAAVQEAAAHFTHTCFMVTPY----EGYVAVTEQLNRLTP-GDHAKRTVLFNSGA  135 (456)
T ss_dssp             TSCEEEESSHHHHTC-TTCTTCHHHHHHHHHHHHHCSCCTTTTSCC----HHHHHHHHHHHHHSS-CSSCEEEEEESSHH
T ss_pred             CCCEEEEccccHHHH-hcCCCCHHHHHHHHHHHhhccCcccCccCc----HHHHHHHHHHHHhCC-CCCCcEEEEeCChH
Confidence            478888987661110 012357899999999887532111  1122    222334444443322 11245799999999


Q ss_pred             HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHH-HcC-------------cEEEEeeccCC----CCcccCHH------
Q 021547          121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAK-RNH-------------IEVRHFDLLPE----RGWEVDLE------  175 (311)
Q Consensus       121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~-~~g-------------~~~~~~~~~~~----~~~~~d~~------  175 (311)
                      +|++.+++.... .|+.+|+....+|.+....+. ..+             ..+..+|....    .....+.+      
T Consensus       136 EA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  215 (456)
T 4atq_A          136 EAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAI  215 (456)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHH
Confidence            999998887643 444789988888876433222 111             12333432110    00011222      


Q ss_pred             -HHHhhcCC-CccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEe
Q 021547          176 -AVEALADE-NTAAIVIINPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLG  252 (311)
Q Consensus       176 -~l~~~l~~-~~~~i~i~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~  252 (311)
                       .+++.+.. ++.++++.......|.+ .+++.+++|.++|++||+++|.||++.++...|. ......++-.++++   
T Consensus       216 ~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~-~~a~e~~gv~PDiv---  291 (456)
T 4atq_A          216 TMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGE-WFAVDHEGVVPDII---  291 (456)
T ss_dssp             HHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTTCCCSEE---
T ss_pred             HHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccc-cccccccCCCCchh---
Confidence             22333333 34445555445556764 5677899999999999999999999998766664 33444454444555   


Q ss_pred             cCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          253 SISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       253 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +++|.+ ..|+.+|.+++..        ++++.+... .+.+++.++++.+++.+.|+
T Consensus       292 t~gK~l-ggg~P~~av~~~~--------~i~~~~~~~~~~~Tf~gnpla~aaala~L~  340 (456)
T 4atq_A          292 TMAKGI-AGGLPLSAITGRA--------DLLDAVHPGGLGGTYGGNPVACAAALAAID  340 (456)
T ss_dssp             EECGGG-GTTSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred             hhhhcc-cCcCCceeeEecH--------HHHhcccccCCCCCCCCChHHHHhhHHHHH
Confidence            678995 4789999999854        366665544 34578889999998887764

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=99.34  E-value=7.3e-11  Score=110.10  Aligned_cols=252  Identities=14%  Similarity=0.054  Sum_probs=153.1

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCC-cHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFG-LPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g-~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      +.+++.+|||..|--... .--.+|.+.+++.+++....  .|....+ ..+....+++.|.+..+  ...+.|+++++|
T Consensus        63 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sG  137 (473)
T 4e3q_A           63 DVNGRRYLDANSGLWNMV-AGFDHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVSP--FDSGRVFYTNSG  137 (473)
T ss_dssp             ETTCCEEEETTTTTTTCT-TCSCCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHSS--CSSCEEEEESSH
T ss_pred             eCCCCEEEEcccCHHHhh-ccCCCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhCC--CCccEEEEeCch
Confidence            346899999987732211 12357899999999887532  2222111 22334446666655433  234689999999


Q ss_pred             HHHHHHHHHHHh-------cCCCCEEEecCCCCcchHH-HHHHcCc-----------EEEEeeccCC---CCcccC----
Q 021547          120 MEAVEIILTVIT-------RLGAANILLPRPGWPFYES-FAKRNHI-----------EVRHFDLLPE---RGWEVD----  173 (311)
Q Consensus       120 ~~a~~~~~~~l~-------~~g~d~Vl~~~p~~~~~~~-~~~~~g~-----------~~~~~~~~~~---~~~~~d----  173 (311)
                      ++|++.+++...       .+++.+|+....+|.+... .+...+-           ....++....   ......    
T Consensus       138 sEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  217 (473)
T 4e3q_A          138 SEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQF  217 (473)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHH
Confidence            999999988753       2444678888888876322 2222221           1222221100   000011    


Q ss_pred             ----HHHHHhhcC---CCccEEEEe-CCCCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC
Q 021547          174 ----LEAVEALAD---ENTAAIVII-NPCNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS  244 (311)
Q Consensus       174 ----~~~l~~~l~---~~~~~i~i~-~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~  244 (311)
                          .+++++.+.   .+..+.++. ......|.+ .+++-+++|.++|++||+++|.||+..++...|.- .....++-
T Consensus       218 ~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~-fa~e~~gv  296 (473)
T 4e3q_A          218 VARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNT-WGCVTYDF  296 (473)
T ss_dssp             HHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSS-CHHHHTTC
T ss_pred             HHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccch-hHHHhcCC
Confidence                223344332   233444444 446666765 45667999999999999999999999998655542 23334444


Q ss_pred             CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh--------hccccCCCchhHHHHHhhhh
Q 021547          245 IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC--------LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       245 ~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .++++   +++|.++..++++|.+++.+        ++.+.+...        .+.+++.+|++.+++.+.|+
T Consensus       297 ~PDi~---t~~K~l~gG~~Pl~av~~~~--------~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~  358 (473)
T 4e3q_A          297 TPDAI---ISSKNLTAGFFPMGAVILGP--------ELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAID  358 (473)
T ss_dssp             CCSEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             CCChH---HhcccccCCCCCcccccccH--------HHHHHhccccccccccccCCCCCCCcchhhhhhhhhh
Confidence            44555   67999765559999999854        466665431        34567889999888877664

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.26  E-value=1.6e-10  Score=114.70  Aligned_cols=248  Identities=12%  Similarity=-0.020  Sum_probs=146.1

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHH
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEI  125 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~  125 (311)
                      .++||..|--....+...+|.+.+++.+++..-..  +.......+....+++.|.+..+.+ ..+.++++++|++|++.
T Consensus       381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h--~~~~~~~~~~~~~Lae~L~~~~p~~-~l~~vff~~SGSeA~E~  457 (831)
T 4a0g_A          381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFGH--VMFPENVYEPALKCAELLLDGVGKG-WASRVYFSDNGSTAIEI  457 (831)
T ss_dssp             EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSS--CCCTTEECHHHHHHHHHHHHTTTTT-TCCEEEEESSHHHHHHH
T ss_pred             heeeecccHhhcCCCCCCCHHHHHHHHHHHhhccc--ccccccCCHHHHHHHHHHHHhCCCC-CCCEEEECCChhHHHHH
Confidence            56666654100011122279999999998864211  1111111233345666665533311 14689999999999998


Q ss_pred             HHHHHh-----cC-----------CCCEEEecCCCCcchH-HHHHHcCc---------------EE-------------E
Q 021547          126 ILTVIT-----RL-----------GAANILLPRPGWPFYE-SFAKRNHI---------------EV-------------R  160 (311)
Q Consensus       126 ~~~~l~-----~~-----------g~d~Vl~~~p~~~~~~-~~~~~~g~---------------~~-------------~  160 (311)
                      +++...     ..           ++.+||.....|.+-. ..+...|.               .+             .
T Consensus       458 AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  537 (831)
T 4a0g_A          458 ALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSW  537 (831)
T ss_dssp             HHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEE
T ss_pred             HHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCce
Confidence            887762     11           3357888887776532 22232221               00             0


Q ss_pred             EeeccCC------CC-cccC------------------HHHHHhhcC-------C-CccEEEEeCC-CCCCccCC-CHHH
Q 021547          161 HFDLLPE------RG-WEVD------------------LEAVEALAD-------E-NTAAIVIINP-CNPCGNVL-TYQH  205 (311)
Q Consensus       161 ~~~~~~~------~~-~~~d------------------~~~l~~~l~-------~-~~~~i~i~~p-~nptG~~~-~~~~  205 (311)
                      .++....      +. ..-+                  .+.|++.+.       . ++.++++... ++..|... +++.
T Consensus       538 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~  617 (831)
T 4a0g_A          538 NISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLF  617 (831)
T ss_dssp             EEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHH
T ss_pred             EecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHH
Confidence            1111100      00 0001                  256677664       2 3444555543 67777754 7888


Q ss_pred             HHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCc-ceeeEEEeeCCCCccchhhHHH
Q 021547          206 LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG-WRFGWLATNDPNGVLQKSGIVG  284 (311)
Q Consensus       206 l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~  284 (311)
                      +++|.++|++||+++|+||++.++...|..+ ....+.-.++++   +++|.++. | +++|++++++        ++++
T Consensus       618 L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PDii---tlsK~L~g-G~~Plgav~~~~--------~i~~  684 (831)
T 4a0g_A          618 QRVLVNECRNRKIPVIFDEVFTGFWRLGVET-TTELLGCKPDIA---CFAKLLTG-GMVPLAVTLATD--------AVFD  684 (831)
T ss_dssp             HHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-THHHHSSCCSEE---EECGGGGT-TSSCCEEEEECH--------HHHH
T ss_pred             HHHHHHHHHHcCCeEEEEcCccccccCCCch-hhHhcCCCCcEE---EEeccccc-CccCcEEEEECH--------HHHH
Confidence            9999999999999999999999887666543 333333333444   79999765 6 8999999864        3666


Q ss_pred             HHhhh-------hccccCCCchhHHHHHhhhh
Q 021547          285 SIKAC-------LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       285 ~~~~~-------~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .+...       ...+++.+|++++++.+.|+
T Consensus       685 ~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~  716 (831)
T 4a0g_A          685 SFSGDSKLKALLHGHSYSAHAMGCATAAKAIQ  716 (831)
T ss_dssp             TTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             HHhcccccccceeecCCcccHHHHHHHHHHHH
Confidence            65431       33567889999988887664

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.17  E-value=1.6e-09  Score=98.53  Aligned_cols=224  Identities=10%  Similarity=-0.016  Sum_probs=139.3

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCcHHHHHHH
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC------YAPMFGLPLARRAV   96 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~i   96 (311)
                      ....+|.++++.-.++     ...-|+|=-..      -..++.+++++...+.+-..-+      |....-+.++++..
T Consensus        37 ~~Dpei~~~i~~E~~R-----Q~~~ieLIASE------N~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la  105 (490)
T 3ou5_A           37 DSDPEMWELLQREKDR-----QCRGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLC  105 (490)
T ss_dssp             HHCHHHHHHHHHHHHH-----HHHSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHH
T ss_pred             hhCHHHHHHHHHHHHH-----HHcCceEecCC------CcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHH
Confidence            4556777777654333     33446654443      2457888888877664321112      33344456666666


Q ss_pred             HHHHhhcCCCCCCCC--CEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH--------HHHcC--cEEEEeec
Q 021547           97 AEYLNRDLPYKLSAD--DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF--------AKRNH--IEVRHFDL  164 (311)
Q Consensus        97 a~~l~~~~g~~~~~~--~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~--------~~~~g--~~~~~~~~  164 (311)
                      .+..++.||.....-  ||-.- +++.|+.+++.+|++|| |+|+..+..+.+....        ....|  ++...+++
T Consensus       106 ~~rak~lF~a~~A~w~VNVQP~-SGs~AN~avy~All~PG-D~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~v  183 (490)
T 3ou5_A          106 QRRALEAFDLDPAQWGVNVQPY-SGSPANLAVYTALLQPH-DRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKL  183 (490)
T ss_dssp             HHHHHHHTTCCTTTEEEECCCS-SHHHHHHHHHHHHCC-C-CCEECBC----------------------------CBCE
T ss_pred             HHHHHHHhCCCccccCCCCCcC-CHHHHHHHHHHHHcCCC-CEEEecccCCCCcccccccCCCccccccccccccccccc
Confidence            666777676543221  44444 45779999999999999 9999887766554321        11222  24445554


Q ss_pred             cCCCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCccccc
Q 021547          165 LPERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVF  242 (311)
Q Consensus       165 ~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~  242 (311)
                      ++ ++..+|.|.+++... .++++|+.-...+|.  .++   .+++.++|++-|.++++|.+|. +|+-.|.-+.|+..-
T Consensus       184 d~-~t~~IDyd~~~~~A~~~kPklIi~G~SaY~r--~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~A  257 (490)
T 3ou5_A          184 NP-KTGLIDYNQLALTARLFRPRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHA  257 (490)
T ss_dssp             ET-TTTEECHHHHHHHHHHHCCSEEEECCSSCCS--CCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTC
T ss_pred             CC-CCCcccHHHHHHHHhhcCCCeEEECCccCcc--ccC---HHHHHHHHhhcccEEEechhhhhhhhcccccCCccccc
Confidence            33 456899999999654 488888877666665  345   8999999999999999999996 466666555555432


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                           .|+.+|.+|+  ++|-|-|.|++.+
T Consensus       258 -----DvVTtTTHKT--LrGPrGG~Il~~~  280 (490)
T 3ou5_A          258 -----DIVTTTTHKT--LRGARSGLIFYRK  280 (490)
T ss_dssp             -----SEEEEESSST--TCSCSCEEEEEEC
T ss_pred             -----eEEecccccc--ccCCCceEEEecc
Confidence                 1889999998  6788989998865

>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*

Probab=83.05  E-value=3.5  Score=38.38  Aligned_cols=113  Identities=17%  Similarity=0.199  Sum_probs=69.4

Q ss_pred             CCCCCCCEEEeCChHHHHHHHHHHHhc---C---------C-CC----EEEecCCCCc-------------------chH
Q 021547          106 YKLSADDIYITLGCMEAVEIILTVITR---L---------G-AA----NILLPRPGWP-------------------FYE  149 (311)
Q Consensus       106 ~~~~~~~v~~t~g~~~a~~~~~~~l~~---~---------g-~d----~Vl~~~p~~~-------------------~~~  149 (311)
                      +.++++.|.++.+...++...+.+|.+   .         | .-    ..+...|.|.                   .+.
T Consensus       126 L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~i  205 (525)
T 3gh5_A          126 LITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQI  205 (525)
T ss_dssp             EEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHH
T ss_pred             EEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHHHH
Confidence            345667888888877777766666642   1         1 00    1344566664                   134


Q ss_pred             HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547          150 SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA  222 (311)
Q Consensus       150 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~  222 (311)
                      ......+.+.-.+.+.++.+|.+..+.+.++-.....    .....+.|..++.+++++|++.|++++|-||-
T Consensus       206 d~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP  274 (525)
T 3gh5_A          206 DLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSK----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVIP  274 (525)
T ss_dssp             HHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred             HHHHHcCCcEEEEEeccCCccccccccchhhhhccCc----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence            5666677777777776666666655443332211100    00122346679999999999999999998874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	311
d1gdea_	388	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	1e-41
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	4e-41
d1j32a_	388	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pho	8e-39
d2hoxa1	425	c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativ	2e-27
d1xi9a_	395	c.67.1.1 (A:) Putative alanine aminotransferase {P	1e-26
d3tata_	397	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	3e-24
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	3e-21
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	3e-20
d1o4sa_	375	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	3e-20
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	9e-20
d7aata_	401	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chi	2e-19
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	9e-19
d1w7la_	418	c.67.1.1 (A:) Kynurenine--oxoglutarate transaminas	5e-18
d1wsta1	403	c.67.1.1 (A:13-415) Multiple substrate aminotransf	3e-17
d1m7ya_	431	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	2e-14
d1bw0a_	412	c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Try	2e-13
d2gb3a1	389	c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotog	3e-12
d2r5ea1	418	c.67.1.1 (A:12-429) Kynurenine--oxoglutarate trans	1e-11
d2aeua1	366	c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Ar	2e-11
d1v2da_	368	c.67.1.1 (A:) Glutamine aminotransferase {Thermus	3e-11
d1iaya_	428	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	7e-11
d1c7na_	394	c.67.1.3 (A:) Cystalysin {Treponema denticola [Tax	1e-10
d1u08a_	382	c.67.1.1 (A:) Putative methionine aminotransferase	1e-09
d1ax4a_	465	c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanas	1e-07
d1d2fa_	361	c.67.1.3 (A:) Modulator in mal gene expression, Ma	8e-07
d1p3wa_	391	c.67.1.3 (A:) Cysteine desulfurase IscS {Escherich	3e-06
d1z7da1	404	c.67.1.4 (A:7-410) Ornithine aminotransferase {Pla	2e-05
d1vefa1	387	c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine a	2e-05
d1vp4a_	420	c.67.1.1 (A:) Putative aminotransferase TM1131 {Th	6e-05
d2v1pa1	467	c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptop	3e-04
d2byla1	404	c.67.1.4 (A:36-439) Ornithine aminotransferase {Hu	3e-04
d1jf9a_	405	c.67.1.3 (A:) NifS-like protein/selenocysteine lya	4e-04

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score =  146 bits (368), Expect = 1e-41
 Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 8/227 (3%)

Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
           + VI LG G+P     F T    ++   +++   + + Y P  GL   R A+AE L +  
Sbjct: 25  KDVISLGIGEPD----FDTPQHIKEYAKEALDKGLTH-YGPNIGLLELREAIAEKLKKQN 79

Query: 105 PYKLSAD-DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFD 163
             +     +I + LG  +A  + L+   + G   +L+P P +  Y         +     
Sbjct: 80  GIEADPKTEIMVLLGANQAFLMGLSAFLKDGE-EVLIPTPAFVSYAPAVILAGGKPVEVP 138

Query: 164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD 223
              E  + ++++ ++    + T A++I +PCNP G VLT + L++IA+   +  ++VI+D
Sbjct: 139 TYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISD 198

Query: 224 EVYGHLAFGSTPYIPM-GVFGSIVPVITLGSISKRWIVPGWRFGWLA 269
           EVY H  +    +  +  + G     IT+   SK + + GWR G++A
Sbjct: 199 EVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVA 245

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score =  144 bits (365), Expect = 4e-41
 Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 10/246 (4%)

Query: 30  YAIVSLMESVD--KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMF 87
            A V++       +     ++ L  G+P     F T    ++A   ++       YAP  
Sbjct: 14  SATVAVNAKALELRRQGVDLVALTAGEPD----FDTPEHVKEAARRALAQGKTK-YAPPA 68

Query: 88  GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPF 147
           G+P  R A+AE   R+    ++ ++  +T+G  +A+  +   I   G   +++  P W  
Sbjct: 69  GIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGD-EVIVLSPYWVS 127

Query: 148 YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQ 207
           Y    +     V   + LPE G+  D E V       T A+V+ +P NP G V   + L+
Sbjct: 128 YPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLE 187

Query: 208 KIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
            +A  A +    +++DE+Y HL +    + P  V       +T+   +K + + GWR G+
Sbjct: 188 ALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPE--HTLTVNGAAKAFAMTGWRIGY 245

Query: 268 LATNDP 273
                 
Sbjct: 246 ACGPKE 251

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

 Score =  138 bits (349), Expect = 8e-39
 Identities = 56/235 (23%), Positives = 96/235 (40%), Gaps = 8/235 (3%)

Query: 41  KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL 100
           K +   V     G+P     F T     +A   ++       Y P  G P  R A+A+ L
Sbjct: 26  KAEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQGKTR-YGPAAGEPRLREAIAQKL 80

Query: 101 NRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR 160
            RD      AD+I +T G  +++  ++  +   G   +++P P W  Y    K       
Sbjct: 81  QRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDE-VIIPAPFWVSYPEMVKLAEGTPV 139

Query: 161 HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220
                 E  ++V  E +       T  +V   P NP G V T   ++ IA+ A + G+ V
Sbjct: 140 ILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWV 199

Query: 221 IADEVYGHLAFGSTPYIPMGVFGSIVP--VITLGSISKRWIVPGWRFGWLATNDP 273
           ++DE+Y  + +    ++ +G          +     +K + + GWR G+LA   P
Sbjct: 200 LSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVP 254

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

 Score =  108 bits (271), Expect = 2e-27
 Identities = 34/242 (14%), Positives = 71/242 (29%), Gaps = 38/242 (15%)

Query: 44  PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGL--PLARRAVAEYLN 101
                 +  GD      +        A++ S    M   + P+         + + E   
Sbjct: 55  QGCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHE 114

Query: 102 RDLPYKLSADDIYITLGC--MEAVEIILTVITRLGAA-------NILLPRPGWPFYESFA 152
                  +A D YI  G    + +  ++  ++    A        ++   P +P +    
Sbjct: 115 VV--GNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQT 172

Query: 153 KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
           K                W  +      +++      ++ +P NP G +            
Sbjct: 173 KYFD--------KKGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGLL------------ 212

Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND 272
             +  ++     +Y  + +    Y P+         I L ++SK     G RFGW    D
Sbjct: 213 --RHAVIKGCKSIYDMVYYWPH-YTPI--KYKADEDILLFTMSKFTGHSGSRFGWALIKD 267

Query: 273 PN 274
            +
Sbjct: 268 ES 269

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} Length = 395

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

 Score =  106 bits (264), Expect = 1e-26
 Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 8/288 (2%)

Query: 25  VAAFRYAIVSLMESVD--KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC 82
             +  YAI  ++      +     VI L  GDP  F  F+     ++A   +++    N 
Sbjct: 8   ALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFD-FQPPEHMKEAYCKAIKEG-HNY 65

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR 142
           Y    GLP  R+A+ E   R     ++ DD+ +T    EA+++I   +   G   IL+P 
Sbjct: 66  YGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGD-EILVPG 124

Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT 202
           P +P Y    K    +   +  + E  W+ D++ +     + T AI +INP NP G +  
Sbjct: 125 PSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYD 184

Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPG 262
            + L++I   A +  I VI+DE+Y  + +      P  +    VPVI +  +SK +   G
Sbjct: 185 KKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKD-VPVIVMNGLSKVYFATG 243

Query: 263 WRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310
           WR G++   DP   L +  +  +I     +R  P+T  Q   +  L  
Sbjct: 244 WRLGYMYFVDPENKLSE--VREAIDRLARIRLCPNTPAQFAAIAGLTG 289

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Length = 397

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

 Score = 99.7 bits (247), Expect = 3e-24
 Identities = 48/250 (19%), Positives = 80/250 (32%), Gaps = 16/250 (6%)

Query: 31  AIVSLMESVDKNDPRP-VIPLGHG----DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP 85
            I++LME   K DPR   + L  G    +    P  +  A AE  +    +    + Y P
Sbjct: 12  PILTLMERF-KEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNA--QPHGASLYLP 68

Query: 86  MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV---EIILTVITRLGAANILLPR 142
           M GL   R A+A  L       L    +        +         +      + + +  
Sbjct: 69  MEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSD 128

Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL---ADENTAAIVIINPCNPCGN 199
           P W  + +       EV  +    E    V    + A        +  ++     NP G 
Sbjct: 129 PTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHNPTGA 188

Query: 200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGS--TPYIPMGVFGSIVPVITLGSISKR 257
            LT      + E  +   ++   D  Y     G     Y    +  + +P +   S SK 
Sbjct: 189 DLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKI 248

Query: 258 WIVPGWRFGW 267
           + + G R G 
Sbjct: 249 FSLYGERVGG 258

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score = 90.8 bits (224), Expect = 3e-21
 Identities = 39/258 (15%), Positives = 70/258 (27%), Gaps = 25/258 (9%)

Query: 31  AIVSLMESVDKNDPRP-VIPLGHG----DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP 85
            +  L+    + DP P  + LG G    D             E  I +   SS+ + Y P
Sbjct: 16  LVFKLIADF-REDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIAN--NSSLNHEYLP 72

Query: 86  MFGLPLARRAVAEYLNRDLPYKLSADDIYITL---------GCMEAVEIILTVITRLGAA 136
           + GL   R   +     D    L    +                E +             
Sbjct: 73  ILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTP 132

Query: 137 NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEV----DLEAVEALADENTAAIVIIN 192
            + +  P W  +         +        +            +    A E +  ++   
Sbjct: 133 -VYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHAC 191

Query: 193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF---GSIVPVI 249
             NP G   T +  ++IA   ++  +    D  Y   A G+       +         + 
Sbjct: 192 AHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELF 251

Query: 250 TLGSISKRWIVPGWRFGW 267
              S SK + +   R G 
Sbjct: 252 CAQSFSKNFGLYNERVGN 269

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score = 88.1 bits (217), Expect = 3e-20
 Identities = 48/296 (16%), Positives = 80/296 (27%), Gaps = 23/296 (7%)

Query: 31  AIVSLMESVDKNDPRP-VIPLG-------HGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC 82
            I+ L +   + D RP  I LG        G        + A          + +     
Sbjct: 12  PILGLADLF-RADERPGKINLGIGVYKDETGKTPVLTSVKKAEQY------LLENETTKN 64

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIIL---TVITRLGAANIL 139
           Y  + G+P   R   E L       ++               + +    +        + 
Sbjct: 65  YLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVW 124

Query: 140 LPRPGWPFYESFAKRNHIEVRHFDLLPERGWEV---DLEAVEALADENTAAIVIINPCNP 196
           +  P WP ++S      +EVR +         +    L      A      +      NP
Sbjct: 125 VSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNP 184

Query: 197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGS--TPYIPMGVFGSIVPVITLGSI 254
            G   T +  Q +A+ + + G L + D  Y   A G                 +I   S 
Sbjct: 185 TGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSY 244

Query: 255 SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN 310
           SK + +   R G       +             A     S P          +L N
Sbjct: 245 SKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Length = 375

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

 Score = 87.8 bits (216), Expect = 3e-20
 Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 6/227 (2%)

Query: 41  KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL 100
                 VI L  G+P     F T     +  V  ++      Y    G+   R  +A+ +
Sbjct: 24  IKKGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGEVK-YTDPRGIYELREGIAKRI 78

Query: 101 NRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR 160
                  +S D + +T G  +A+      +   G   +++  P W  Y          V 
Sbjct: 79  GERYKKDISPDQVVVTNGAKQALFNAFMALLDPGD-EVIVFSPVWVSYIPQIILAGGTVN 137

Query: 161 HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220
             +    + ++  LE VE L    T A++I +P NP G V   + L+ +   A+K    +
Sbjct: 138 VVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYI 197

Query: 221 IADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
           I+DEVY  L +       + V      ++ +   SK   + GWR G+
Sbjct: 198 ISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGY 244

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score = 86.6 bits (213), Expect = 9e-20
 Identities = 40/260 (15%), Positives = 76/260 (29%), Gaps = 20/260 (7%)

Query: 31  AIVSLMESVDKNDPRP-VIPLGHG----DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP 85
           A+  + +     D R   + LG G    D        +   AE  I +   SS  + Y  
Sbjct: 15  ALFGIKQRY-GQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHN--DSSYNHEYLG 71

Query: 86  MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI---TRLGAANILLPR 142
           + GLP      A+ +       L  D +           + ++            + L +
Sbjct: 72  ITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSK 131

Query: 143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENT---AAIVIINPCNPCGN 199
           P W  + +  +   ++   +         +DL        +       ++     NP G 
Sbjct: 132 PTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGL 191

Query: 200 VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP------MGVFGSIVPVITLGS 253
             T +   +I +       + + D  Y   A G            +    ++ PV    S
Sbjct: 192 DPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQS 251

Query: 254 ISKRWIVPGWRFGWLATNDP 273
            +K   + G R G       
Sbjct: 252 FAKNAGMYGERVGCFHLALT 271

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Length = 401

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

 Score = 85.8 bits (211), Expect = 2e-19
 Identities = 43/256 (16%), Positives = 77/256 (30%), Gaps = 25/256 (9%)

Query: 31  AIVSLMESVDKNDPRP-VIPLG-------HGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC 82
            I+ + E+  K D     + LG       +G P    C R A              M   
Sbjct: 14  PILGVTEAF-KRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAM------IAAKKMDKE 66

Query: 83  YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAAN----I 138
           Y P+ GL    RA AE    +      +       G      + +              +
Sbjct: 67  YLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDV 126

Query: 139 LLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA---DENTAAIVIINPCN 195
            LP+P W  +    +   ++++ +     +   +D            E +  ++     N
Sbjct: 127 YLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHN 186

Query: 196 PCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG---VFGSIVPVITLG 252
           P G     +  +++A   +K  +L   D  Y   A G                + V+   
Sbjct: 187 PTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQ 246

Query: 253 SISKRWIVPGWRFGWL 268
           S +K   + G R G  
Sbjct: 247 SYAKNMGLYGERAGAF 262

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score = 83.5 bits (205), Expect = 9e-19
 Identities = 51/247 (20%), Positives = 84/247 (34%), Gaps = 14/247 (5%)

Query: 31  AIVSLMESVDKNDPRP-VIPLGHG----DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP 85
            I++LM    + DPR   I LG G         P  R    AE  ++++        YA 
Sbjct: 12  KILALMGEF-RADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLET---ETTKTYAG 67

Query: 86  MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGW 145
           + G P  ++A+ E +  D     +   +    G     + +           + +  P W
Sbjct: 68  LSGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTW 127

Query: 146 PFYESFAKRNHIEVRHFDLLPERGWEV---DLEAVEALADENTAAIVIINPCNPCGNVLT 202
           P + S      + V+ +         V    ++A  A A +    ++     NP G  LT
Sbjct: 128 PNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLT 187

Query: 203 YQHLQKIAETARKLGILVIADEVYGHLAFG--STPYIPMGVFGSIVPVITLGSISKRWIV 260
                +IA    K G L + D  Y     G          +   I  V+   S SK + +
Sbjct: 188 LDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGI 247

Query: 261 PGWRFGW 267
              R G 
Sbjct: 248 YRERTGC 254

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.7 bits (200), Expect = 5e-18
 Identities = 51/236 (21%), Positives = 90/236 (38%), Gaps = 18/236 (7%)

Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS-SMFNCYAPMFGLPLARRAVAEYLNRD 103
             V+ LG G P     F     A +A   +V    M N Y   FG P   + +A +    
Sbjct: 25  HDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGEL 80

Query: 104 LPYKLSADD-IYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHF 162
           L  ++     + +T+G   A+      +       +++  P +  YE             
Sbjct: 81  LGQEIDPLRNVLVTVGGYGALFTAFQALVD-EGDEVIIIEPFFDCYEPMTMMAGGRPVFV 139

Query: 163 DLLP----------ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAET 212
            L P             W++D   +       T A+V+  P NP G V + + L+ +A  
Sbjct: 140 SLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASL 199

Query: 213 ARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP-VITLGSISKRWIVPGWRFGW 267
            ++  ++ I DEVY  + +    +I +     +    +T+GS  K +   GW+ GW
Sbjct: 200 CQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGW 255

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} Length = 403

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

 Score = 79.3 bits (194), Expect = 3e-17
 Identities = 47/242 (19%), Positives = 89/242 (36%), Gaps = 11/242 (4%)

Query: 31  AIVSLMESVDKNDPRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFG 88
            +  L++ V+ +D   VI L  G   P  FP      +A + + +    ++   Y    G
Sbjct: 18  EVRELLKLVETSD---VISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQ--YGTTKG 72

Query: 89  LPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLP--RPGWP 146
               R A+A ++ +     +S  +I    G  +A+++I  V    G   ++         
Sbjct: 73  FTPLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAI 132

Query: 147 FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPC-GNVLTYQH 205
               +     I +   D         +         +    +  ++      G  ++   
Sbjct: 133 QAFKYYDPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDR 192

Query: 206 LQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF 265
            +K+ E A +   L++ D  Y  L +   P  P+  F     VI LG+ SK  + PG+R 
Sbjct: 193 RKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK-ILAPGFRI 251

Query: 266 GW 267
           GW
Sbjct: 252 GW 253

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]} Length = 431

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

 Score = 70.8 bits (172), Expect = 2e-14
 Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 20/208 (9%)

Query: 83  YAPMFGLPLARRAVAEYLN--RDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140
           +    GLP  ++A+ +++   R        + + +T G   A E  +  +       +L+
Sbjct: 80  FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLAD-PGEAVLI 138

Query: 141 PRPGWPFYESFAKRNH-IEVRHFDLLPERGWEVDLEAVEALADE------NTAAIVIINP 193
           P P +P ++   K    +E+         G+++   A+E    E          +++ NP
Sbjct: 139 PTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNP 198

Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM----------GVFG 243
            NP G  +T   L  +       GI +I+DE+Y   AF S  +I +              
Sbjct: 199 SNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSE 258

Query: 244 SIVPVITLGSISKRWIVPGWRFGWLATN 271
               V  + S+SK   +PG+R G + +N
Sbjct: 259 VWQRVHVVYSLSKDLGLPGFRVGAIYSN 286

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 68.0 bits (164), Expect = 2e-13
 Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 12/255 (4%)

Query: 32  IVSLMESVDKN-DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLP 90
           I ++ ++   +  P+P+I L  GDP       T+A     + +++ S   N Y P  G P
Sbjct: 16  IRTVSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSP 75

Query: 91  LARRAVAEYLNR------DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPG 144
            AR AVA +         +L   +  D++ +         ++            L+P+PG
Sbjct: 76  EAREAVATWWRNSFVHKEELKSTIVKDNVVLC-SGGSHGILMAITAICDAGDYALVPQPG 134

Query: 145 WPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQ 204
           +P YE+  K   I +  ++  PE  WE DL+ +  L D+ T  +++ NP NPCG+  + +
Sbjct: 135 FPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRK 194

Query: 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIP----MGVFGSIVPVITLGSISKRWIV 260
           H++ I   A +L + + +DE+Y  + F           +  F + VP + LG  +K  +V
Sbjct: 195 HVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVV 254

Query: 261 PGWRFGWLATNDPNG 275
           PGWR GWL   DP+G
Sbjct: 255 PGWRLGWLLYVDPHG 269

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} Length = 389

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

 Score = 64.5 bits (155), Expect = 3e-12
 Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 10/227 (4%)

Query: 41  KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL 100
           K     +  L  G P      +T  V  + I ++        Y+   G+   R A A Y 
Sbjct: 24  KKRGVRIHHLNIGQPD----LKTPEVFFERIYENKPE--VVYYSHSAGIWELREAFASYY 77

Query: 101 NRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVR 160
            R     +  +++ +T G  EA+     VI   G   IL+  P +  Y +FAK   +++ 
Sbjct: 78  KRRQRVDVKPENVLVTNGGSEAILFSFAVIANPG-DEILVLEPFYANYNAFAKIAGVKLI 136

Query: 161 HFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILV 220
                 E G+ +  + +E+  +E T  IV+ NPCNP G V     ++ + E A + G+ +
Sbjct: 137 PVTRRMEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFL 195

Query: 221 IADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
           I DEVY              +      V+ + S+SK++   G R G 
Sbjct: 196 IVDEVYSE--IVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGC 240

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

 Score = 62.9 bits (151), Expect = 1e-11
 Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 17/233 (7%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS--SMFNCYAPMFGLPLARRAVAEYLNRDL 104
            + LG G    FP +     A +A+  +  S   + N Y   FG P   +A+++  ++ +
Sbjct: 28  PLNLGQG----FPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLV 83

Query: 105 PYKLS-ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFD 163
              ++   ++ +T+G  EA+   +          +++  P +  YE   K      R   
Sbjct: 84  DRTINPMTEVLVTVGAYEALYATIQGHVD-EGDEVIIIEPFFDCYEPMVKAAGGIPRFIP 142

Query: 164 LLPERG--------WEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK 215
           L P +         W +D   +EAL +E T  I+I  P NP G V+    L+ +A   +K
Sbjct: 143 LKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKK 202

Query: 216 LGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGW 267
             +L ++DEVY H+ F    +I +    G     IT+GS  K + + GW+ GW
Sbjct: 203 WNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGW 255

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 366

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 61.8 bits (149), Expect = 2e-11
 Identities = 25/200 (12%), Positives = 62/200 (31%), Gaps = 19/200 (9%)

Query: 71  IVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI 130
           I +  ++ +       +          ++L  D       D          A+   +  +
Sbjct: 34  IDEKDKALLNTYIGSSYFAEKVNEYGLKHLGGD-----ENDKCVGFNRTSSAILATILAL 88

Query: 131 TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVI 190
                 + L   PG P  E       +  ++F+          +  +    D++T  I+ 
Sbjct: 89  KPKKVIHYLPELPGHPSIERSC--KIVNAKYFESD-------KVGEILNKIDKDTLVIIT 139

Query: 191 INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST---PYIPMGVFGSIVP 247
            +  +    V+  ++ +K+  TA+    +V  D+  G          P + +G    +  
Sbjct: 140 GSTMDL--KVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTS 197

Query: 248 VITLGSISKRWIVPGWRFGW 267
              L    +  ++ G +   
Sbjct: 198 TDKLMEGPRGGLLAGKKELV 217

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} Length = 368

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 60.9 bits (146), Expect = 3e-11
 Identities = 52/221 (23%), Positives = 85/221 (38%), Gaps = 14/221 (6%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY 106
            + LG G    FP         +A+  ++     + YAP  GLP  R A+AE    +   
Sbjct: 27  AVNLGQG----FPSNPPPPFLLEAVRRALGRQ--DQYAPPAGLPALREALAEEFAVE--- 77

Query: 107 KLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP 166
                 +  +        ++ +++       +L P       ++F       +   DL P
Sbjct: 78  --PESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTP 135

Query: 167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVY 226
           E  + +DL A+E      T A+++  P NP G V   + L+ IA  AR   + +I+DEVY
Sbjct: 136 EG-FRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVY 194

Query: 227 GHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGW 267
             L +G  P             +       R    G+R GW
Sbjct: 195 DELYYGERPRRLREFAPERTFTVGSAGK--RLEATGYRVGW 233

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 428

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

 Score = 60.4 bits (145), Expect = 7e-11
 Identities = 37/202 (18%), Positives = 78/202 (38%), Gaps = 18/202 (8%)

Query: 83  YAPMFGLPLARRAVAEYLNR--DLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL 140
           +    GLP  R+A+A+++ +      +   + + +  G   A E I+  +   G A  L+
Sbjct: 79  FQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDA-FLV 137

Query: 141 PRPGWPFYESF-AKRNHIEVRHFDLLPERGWEVDL------EAVEALADENTAAIVIINP 193
           P P +P +      R  +++          +++              ++     +++ NP
Sbjct: 138 PSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNP 197

Query: 194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVP------ 247
            NP G  L    L+ +     +  I ++ DE+Y    F +  ++ +              
Sbjct: 198 SNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNK 257

Query: 248 --VITLGSISKRWIVPGWRFGW 267
             V  + S+SK   +PG+R G 
Sbjct: 258 DLVHIVYSLSKDMGLPGFRVGI 279

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

 Score = 59.4 bits (142), Expect = 1e-10
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 8/240 (3%)

Query: 36  MESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRA 95
           M S +      V+PL   D      F+      + +   +  ++   Y         ++ 
Sbjct: 22  MYSQNPEVGNEVVPLSVADM----EFKNPPELIEGLKKYLDETVLG-YTG--PTEEYKKT 74

Query: 96  VAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRN 155
           V +++     + +  D I  T G + AV   +   T+ G   I++    +PF+ +   + 
Sbjct: 75  VKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQE 134

Query: 156 HIEVRHFDLLPERGWEV-DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETAR 214
              +    L  +  + +   +  +   D+N  A++  +P NP G V     LQKI +   
Sbjct: 135 RKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVL 194

Query: 215 KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN 274
           K  +++ +DE++  L      +         +   T+   +          G       N
Sbjct: 195 KSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN 254

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

 Score = 56.7 bits (135), Expect = 1e-09
 Identities = 48/224 (21%), Positives = 78/224 (34%), Gaps = 7/224 (3%)

Query: 45  RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDL 104
              I L  G    FP F      ++ +   V     N YAPM G+   R A+A+   R  
Sbjct: 26  HQAINLSQG----FPDFDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLY 80

Query: 105 PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL 164
            Y+  AD                          ++   P +  Y      +   V+    
Sbjct: 81  GYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMA- 139

Query: 165 LPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE 224
           L    + VD +   AL  E T  +++  P NP   V        + +      I VI+DE
Sbjct: 140 LQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDE 199

Query: 225 VYGHLAFGSTPYIPMGVFGSIVP-VITLGSISKRWIVPGWRFGW 267
           VY H+ F    +  +     +    + + S  K + + GW+ G+
Sbjct: 200 VYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGY 243

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]} Length = 465

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

 Score = 50.3 bits (119), Expect = 1e-07
 Identities = 31/281 (11%), Positives = 72/281 (25%), Gaps = 41/281 (14%)

Query: 47  VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF---NCYAPMFGLPLARRAVAEYLNRD 103
              L       +    T +    A+ D   ++M      YA        +    E  N  
Sbjct: 35  PFLLPSSAV--YIDLLTDSGTN-AMSDHQWAAMITGDEAYAGSRNYYDLKDKAKELFN-- 89

Query: 104 LPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPR----PGWPFYESFA------- 152
                  D I        A  I+  V+ +                + F  + A       
Sbjct: 90  ------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGC 143

Query: 153 ---KRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGN-----VLTYQ 204
                   +    +   +   + D++ ++    ++ A  ++        N      ++  
Sbjct: 144 KAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMS 203

Query: 205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--------IVPVITLGSISK 256
           +L+++ E A++ GI V+ D                    +        +       ++S 
Sbjct: 204 NLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSA 263

Query: 257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPS 297
           +        G +A  D   +   +              G +
Sbjct: 264 KKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLA 304

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} Length = 361

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

 Score = 47.5 bits (111), Expect = 8e-07
 Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 6/76 (7%)

Query: 48  IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYK 107
           +P    D      F TA    +A+   +   +F  Y+          A+A + +      
Sbjct: 2   LPFTISDMD----FATAPCIIEALNQRLMHGVFG-YSRWKNDEF-LAAIAHWFSTQHYTA 55

Query: 108 LSADDIYITLGCMEAV 123
           + +  +      +  V
Sbjct: 56  IDSQTVVYGPSVIYMV 71

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]} Length = 391

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

 Score = 46.1 bits (108), Expect = 3e-06
 Identities = 35/208 (16%), Positives = 66/208 (31%), Gaps = 25/208 (12%)

Query: 92  ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAA---NILLPRPGWPFY 148
           AR  +A+ +  D        +I  T G  E+  + +            +I+  +      
Sbjct: 53  ARNQIADLVGAD------PREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAV 106

Query: 149 ES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQH 205
                  +R   EV +    P+R   +DL+ +EA   ++T  + I++  N  G V     
Sbjct: 107 LDTCRQLEREGFEVTYLA--PQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAA 164

Query: 206 LQKI---------AETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISK 256
           + ++          +  + +G L I            + +   G  G     +       
Sbjct: 165 IGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPR-- 222

Query: 257 RWIVPGWRFGWLATNDPNGVLQKSGIVG 284
             I      G       +G L    IVG
Sbjct: 223 VRIEAQMHGGGHERGMRSGTLPVHQIVG 250

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]} Length = 404

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

 Score = 43.6 bits (102), Expect = 2e-05
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 178 EALADENTAAIVIINPCNPCGNVLTY--QHLQKIAETARKLGILVIADEVYGHLAFGSTP 235
           E L D N  A  I+ P      V+     +LQ + +  +K  +L +ADEV      G T 
Sbjct: 180 EELKDPNVCAF-IVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEV--QTGLGRTG 236

Query: 236 YIPMGVFGSIVP-VITLG 252
            +      ++ P VI LG
Sbjct: 237 KLLCVHHYNVKPDVILLG 254

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]} Length = 387

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

 Score = 43.2 bits (101), Expect = 2e-05
 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 5/83 (6%)

Query: 173 DLEAVEALADENTAAIVIINPCNPCGNVLTYQH--LQKIAETARKLGILVIADEVYGHLA 230
           D+EA++   DE TAA VI+ P    G V       L+   E  ++ G L+I DE+     
Sbjct: 166 DVEALKRAVDEETAA-VILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEI--QTG 222

Query: 231 FGSTPYIPMGVFGSIVPVITLGS 253
            G T          IVP I   +
Sbjct: 223 MGRTGKRFAFEHFGIVPDILTLA 245

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]} Length = 420

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

 Score = 42.1 bits (97), Expect = 6e-05
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 45  RPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNR 102
           +  I  G G  DP  FP    A +A++ I      ++   Y+   G P+ ++ + + L R
Sbjct: 38  KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQ--YSTTEGDPVLKQQILKLLER 95

Query: 103 DLPYKLSADDIYITLGCM 120
                   +D  I     
Sbjct: 96  MYGITGLDEDNLIFTVGS 113

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]} Length = 467

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

 Score = 39.9 bits (92), Expect = 3e-04
 Identities = 34/252 (13%), Positives = 70/252 (27%), Gaps = 27/252 (10%)

Query: 28  FRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF-NCYAPM 86
           FR  ++  ++   +      I     +P       +  V  D + DS   ++  +  A M
Sbjct: 7   FRIRVIEPVKRTTRAYREEAIIKSGMNPFLLD---SEDVFIDLLTDSGTGAVTQSMQAAM 63

Query: 87  FGLPLA----------RRAVAEYLNRD----LPYKLSADDIYITLGCMEAVEIILTVITR 132
                A            +V                 A+ IYI +   +  +      ++
Sbjct: 64  MRGDEAFSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSK 123

Query: 133 LGA-ANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWE---VDLEAVEALADENTAAI 188
           + A +N            +     ++ ++       R       DLE +E   +E     
Sbjct: 124 MVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNN 183

Query: 189 VIINPCNPC-----GNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG 243
           V             G  ++  +L+ +   A+K  I V+ D                    
Sbjct: 184 VPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKD 243

Query: 244 SIVPVITLGSIS 255
             +  IT  +  
Sbjct: 244 WTIEQITRETYK 255

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 404

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 3e-04
 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 7/84 (8%)

Query: 173 DLEAVE-ALADENTAAIVIINPCNPCGNVLTYQH--LQKIAETARKLGILVIADEVYGHL 229
           DL A+E AL D N AA  ++ P      V+      L  + E   +  +L IADE+    
Sbjct: 176 DLPALERALQDPNVAA-FMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEI--QT 232

Query: 230 AFGSTPYIPMGVFGSIVP-VITLG 252
               T       + ++ P ++ LG
Sbjct: 233 GLARTGRWLAVDYENVRPDIVLLG 256

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]} Length = 405

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

 Score = 39.1 bits (90), Expect = 4e-04
 Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 29/149 (19%)

Query: 92  ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILT-------------VITRLGAANI 138
            R+  + ++N       SA+++    G  E + ++               +I+++     
Sbjct: 71  VRKRASLFINAR-----SAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHAN 125

Query: 139 LLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCG 198
           ++P      ++    R   E+R   L P+    + LE +  L DE T  + I +  N  G
Sbjct: 126 IVP------WQMLCARVGAELRVIPLNPD--GTLQLETLPTLFDEKTRLLAITHVSNVLG 177

Query: 199 NVLTYQHLQKIAETARKLGILVIADEVYG 227
              T   L ++   A + G  V+ D    
Sbjct: 178 ---TENPLAEMITLAHQHGAKVLVDGAQA 203

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	311
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	100.0
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	100.0
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	100.0
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	100.0
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	100.0
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	100.0
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	100.0
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	100.0
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	100.0
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	100.0
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	100.0
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	100.0
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	100.0
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	100.0
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	100.0
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	100.0
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	100.0
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	100.0
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	100.0
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	100.0
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	100.0
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	100.0
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	100.0
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	99.98
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	99.95
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.91
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.91
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.88
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.84
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.81
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.8
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.79
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.79
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.78
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.76
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.76
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.73
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.72
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.72
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.7
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.7
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.69
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.69
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.67
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.67
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.65
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.61
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.6
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.59
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.59
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.58
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.58
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.58
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.56
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.51
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.5
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.49
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.47
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.46
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.46
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.45
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.45
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.44
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.43
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.42
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.39
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.37
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.37
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.31
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.29
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.26
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.24
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.22
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.22
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.2
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	99.16
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.14
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.14
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.03
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	98.91
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	98.79
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	98.74
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	98.08
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	97.43
d1ofux_	119	Hypothetical protein PA3008 {Pseudomonas aeruginos	90.48
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	81.7
d1rd5a_	261	Trp synthase alpha-subunit {Maize (Zea mays) [TaxI	81.36

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.4e-46  Score=341.01  Aligned_cols=276  Identities=22%  Similarity=0.392  Sum_probs=238.2

Q ss_pred             chHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 021547           13 VKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLA   92 (311)
Q Consensus        13 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~l   92 (311)
                      +|+|.+.   -.++.++++.+...+ +++ +|.++|+|+.|+|+    +++|+.+++++.+++..+. .+|+++.|.++|
T Consensus         4 ~~~r~~~---~~~s~~~~i~~~a~~-~~~-~G~~vi~l~~g~p~----~~~p~~i~~a~~~~~~~~~-~~Y~~~~G~~~l   73 (382)
T d1b5pa_           4 LSRRVQA---MKPSATVAVNAKALE-LRR-QGVDLVALTAGEPD----FDTPEHVKEAARRALAQGK-TKYAPPAGIPEL   73 (382)
T ss_dssp             CCHHHHH---CCCCHHHHHHHHHHH-HHH-TTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHH
T ss_pred             HHHHHHh---CCCCHHHHHHHHHHH-HHh-CCCCeEECCCCCCC----CCCCHHHHHHHHHHHhcCC-cCCCCCCCCHHH
Confidence            3555555   456677777654332 332 47899999999965    7889999999999887654 489999999999


Q ss_pred             HHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCccc
Q 021547           93 RRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEV  172 (311)
Q Consensus        93 r~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  172 (311)
                      |+++++++.+++|+++++++|++|+|+++++..++.+++++| |.|++++|+|++|...++..|.+++.+++.+++++.+
T Consensus        74 R~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~g-d~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  152 (382)
T d1b5pa_          74 REALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPG-DEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVP  152 (382)
T ss_dssp             HHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC
T ss_pred             HHHHHhhhhhhcccccccccceecCCHHHHHHHHHHHhCCCC-CEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCC
Confidence            999999999999999999999999999999999999999999 9999999999999999999999999999888788999


Q ss_pred             CHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEe
Q 021547          173 DLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLG  252 (311)
Q Consensus       173 d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~  252 (311)
                      |++.+++.++++++++++++||||||.+++.+++++|+++|++||++||+||+|+++.|++.++.+...  ..+++|+++
T Consensus       153 d~~~l~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~  230 (382)
T d1b5pa_         153 DPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRV--APEHTLTVN  230 (382)
T ss_dssp             CHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGT--CTTTEEEEE
T ss_pred             CHHHHHHhCCCCCeEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCHHHc--CCCCEEEEe
Confidence            999999999999999999999999999999999999999999999999999999999998766655443  345899999


Q ss_pred             cCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhh
Q 021547          253 SISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       253 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~  309 (311)
                      |+||.|++||+|+||+++++        ++++.+.... ....+++.+.|.+++..+.
T Consensus       231 s~SK~~~~~GlR~G~~~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (382)
T d1b5pa_         231 GAAKAFAMTGWRIGYACGPK--------EVIKAMASVSRQSTTSPDTIAQWATLEALT  280 (382)
T ss_dssp             ESTTTTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHH
T ss_pred             cchhhccCcHhheEEEEECH--------HHHHHHHHHHHhcccCcccccccccccccc
Confidence            99999999999999999854        4677766553 3456778888888776654

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=100.00  E-value=1.9e-46  Score=342.28  Aligned_cols=254  Identities=23%  Similarity=0.369  Sum_probs=228.3

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .+.++|+|+.|+|+    +++|+.+++++.+.++.+. ++|+++.|.+++|+++++++.+.+|+.+++++|++|+|++++
T Consensus        28 ~g~~vi~l~~G~p~----~~~p~~v~~a~~~~~~~~~-~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~~~i~it~G~~~a  102 (388)
T d1j32a_          28 EGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQGK-TRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQS  102 (388)
T ss_dssp             TTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred             CCCCeEECCCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHhcccCCCCceEEEcCCHHHH
Confidence            47899999999965    7889999999999987654 489999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+++++| |.|++++|+|++|...++..|.+.+.++...++++.+|++++++.++++++++++++|+||||.+++
T Consensus       103 l~~~~~~~~~~g-d~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~P~NPTG~~~~  181 (388)
T d1j32a_         103 IFNLMLAMIEPG-DEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYT  181 (388)
T ss_dssp             HHHHHHHHCCTT-CEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHHhCCC-CEEEEcCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCCCCCeEEEECCCCCCCCcccc
Confidence            999999999999 9999999999999999999999999999888888999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKS  280 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  280 (311)
                      .+++++|+++|+++|++||+||+|+.+.+++.++.++.....  .+++|+++|+||.|++||+|+||++++.        
T Consensus       182 ~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~GlRvG~~~~~~--------  253 (388)
T d1j32a_         182 PDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPV--------  253 (388)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCH--------
T ss_pred             hhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecCChhhhhcchhHeEEEEECH--------
Confidence            999999999999999999999999999998777777655543  2479999999999999999999999854        


Q ss_pred             hHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547          281 GIVGSIKACL-GVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       281 ~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++++.+.... ....+++.++|.++...+.+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~  284 (388)
T d1j32a_         254 PLVKAATKIQGHSTSNVCTFAQYGAIAAYEN  284 (388)
T ss_dssp             HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhhhhccccccHHHHHHHhhcccc
Confidence            4677766653 35678899999988887754

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=1.1e-45  Score=337.15  Aligned_cols=275  Identities=24%  Similarity=0.403  Sum_probs=239.7

Q ss_pred             chHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 021547           13 VKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLA   92 (311)
Q Consensus        13 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~l   92 (311)
                      +|.|.+.   -..+.||++++....      .+++|+|+.|+|+    +++|+.+++++.+++.++ ..+|+++.|.++|
T Consensus         2 ~s~~~~~---~~~s~ir~~~~~~~~------~~dvi~l~~g~p~----~~~p~~v~~~~~~a~~~~-~~~Y~~~~G~~~l   67 (388)
T d1gdea_           2 LSDRLEL---VSASEIRKLFDIAAG------MKDVISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLEL   67 (388)
T ss_dssp             HHHHHHH---SCCCHHHHHHHHHHH------CTTCEECCCCSCC----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHH
T ss_pred             hhhhhhh---CCccHHHHHHHHHhC------CCCeEECCCCCCC----CCCCHHHHHHHHHHHhcC-ccCCCCCcCCHHH
Confidence            4556666   678899999875322      4679999999965    788999999999998764 3489999999999


Q ss_pred             HHHHHHHHhhcCCC-CCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcc
Q 021547           93 RRAVAEYLNRDLPY-KLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWE  171 (311)
Q Consensus        93 r~~ia~~l~~~~g~-~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  171 (311)
                      |++++++++++++. ....++|++|+|+++++..++.+++++| |+|++++|+|..|...++..|.+++.+++..+++|.
T Consensus        68 r~aia~~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~  146 (388)
T d1gdea_          68 REAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDG-EEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFR  146 (388)
T ss_dssp             HHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTT-CEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTC
T ss_pred             HHHHHHHHHhhccccCCChheeeeccCcchHHHHHHHHhcCCC-CEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCC
Confidence            99999999876654 4566789999999999999999999999 999999999999999999999999999998888899


Q ss_pred             cCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEE
Q 021547          172 VDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVIT  250 (311)
Q Consensus       172 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~  250 (311)
                      +|+++|++.++++++++++++||||||.+++.+++++|+++|++|+++||+||+|+.+.+++.++.++..++. .+++|+
T Consensus       147 ~d~~~l~~~~~~~~~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~  226 (388)
T d1gdea_         147 LNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTIT  226 (388)
T ss_dssp             CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEE
T ss_pred             CCHHHHHHhCccCCeEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEE
Confidence            9999999999999999999999999999999999999999999999999999999999988777777666654 358999


Q ss_pred             EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547          251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++||||.|++||+|+||+++++        +++..+.... ....+++.+.|.+++.++++
T Consensus       227 ~~S~SK~~~~~GlR~G~ii~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  279 (388)
T d1gdea_         227 VNGFSKTFAMTGWRLGFVAAPS--------WIIERMVKFQMYNATCPVTFIQYAAAKALKD  279 (388)
T ss_dssp             EEESTTTTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHTC
T ss_pred             EeCChhhccCccccEEEEEeec--------cchhhhhhccccccccccccchhhHHHHHhh
Confidence            9999999999999999999864        3666666653 35678889999999888764

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=2.8e-45  Score=335.27  Aligned_cols=287  Identities=27%  Similarity=0.466  Sum_probs=239.2

Q ss_pred             cchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH
Q 021547           12 EVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPL   91 (311)
Q Consensus        12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~   91 (311)
                      +.|+|++.   .+ ..||+++.. ++.+++ +|.++|+|+.|+|... .+++|+.+++++.+++..+ ..+|++..|.++
T Consensus         3 ~~s~r~~~---~~-~~ir~i~~~-a~~l~~-~G~~vi~l~~G~P~~~-df~~p~~i~~a~~~a~~~~-~~~Y~~~~G~~~   74 (395)
T d1xi9a_           3 RASKRALS---VE-YAIRDVVLP-ARELEK-KGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPE   74 (395)
T ss_dssp             CCCHHHHT---CC-C-------C-HHHHHH-TTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTT-CCSCCCTTCCHH
T ss_pred             cchhcccc---Cc-HHHHHHHHH-HHHHHH-CCCCeEECCCCCCCCC-CCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHH
Confidence            45777777   54 478888753 344433 4889999999998532 5889999999999998764 347999999999


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcc
Q 021547           92 ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWE  171 (311)
Q Consensus        92 lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  171 (311)
                      ||+++++++++++|+.+++++|++|+|+++++.+++.+++.+| |+|++++|+|+.|...++..|.+++.++....+++.
T Consensus        75 LR~aia~~~~~~~g~~~~~~~i~i~~G~~~~~~~~~~~~~~~G-d~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~  153 (395)
T d1xi9a_          75 LRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPG-DEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQ  153 (395)
T ss_dssp             HHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSE
T ss_pred             HHHHHHHhhhhcccccccccccccccccchhhhhhhhhhcCCC-CEEEEcCCccccchhhhhhcCCEEEEEecccccccc
Confidence            9999999999999999999999999999999999999999999 999999999999999999999999999988888899


Q ss_pred             cCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEE
Q 021547          172 VDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITL  251 (311)
Q Consensus       172 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i  251 (311)
                      +|.+++++.+.++++++++++||||||.+++.+++++|+++|++|+++||+|++|..+.|++... +...+....++|++
T Consensus       154 ~d~~~~~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~vi~~  232 (395)
T d1xi9a_         154 PDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHI-SPGSLTKDVPVIVM  232 (395)
T ss_dssp             ECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCC-CHHHHCSSSCEEEE
T ss_pred             chHHHHHHhhcccccEEEecCCCCCccchhhHHHHHHHHhhhhhcCeeEEecccccccccccccc-chhhcCCCCCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999998876443 33445566789999


Q ss_pred             ecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          252 GSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       252 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +||||.|++||+|+||++++++.....  .+.+..........+++.++|.++...+.+
T Consensus       233 ~S~SK~~~~~GlRvG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~  289 (395)
T d1xi9a_         233 NGLSKVYFATGWRLGYMYFVDPENKLS--EVREAIDRLARIRLCPNTPAQFAAIAGLTG  289 (395)
T ss_dssp             EESTTTTCCGGGCCEEEEEECTTCTTH--HHHHHHHHHHHHTCCSCSHHHHHHHHHHHS
T ss_pred             eCcchhcccchhhcEeeEecCHHHHHH--HHHHHHHHhhcCCCCcCHHHHHHHHHHhcC
Confidence            999999999999999998877654431  133333333444568899999999888764

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=3e-43  Score=323.46  Aligned_cols=290  Identities=28%  Similarity=0.544  Sum_probs=239.4

Q ss_pred             ccccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCC
Q 021547            9 WGFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFG   88 (311)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g   88 (311)
                      |..++|..+.-   . -+.||.+.+.+   ..+..+.++|+|+.|+|+..+..++++.+.+++.+.+.....++|++..|
T Consensus         1 ~~~~~~~~~~~---~-~~pir~~~~~~---~~~~~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G   73 (412)
T d1bw0a_           1 WDVSMSNHAGL---V-FNPIRTVSDNA---KPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVG   73 (412)
T ss_dssp             CCCCCCHHHHT---C-CCHHHHHHHTC---CCCCSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTC
T ss_pred             CCCChhhcccC---C-ccHHHHHHHhc---CCCCCCCCcEECcCCCCCCCCCccccHHHHHHHHHHhhCCCCCCCCCCcC
Confidence            77777755443   2 35677777642   11224578999999999876667788999999998887777778999999


Q ss_pred             cHHHHHHHHHHHhhcC------CCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEe
Q 021547           89 LPLARRAVAEYLNRDL------PYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHF  162 (311)
Q Consensus        89 ~~~lr~~ia~~l~~~~------g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~  162 (311)
                      .++||+++++|+++++      +..+++++|++|+|+++++..++.+++++| |+|++++|+|+.|...++..|.+++.+
T Consensus        74 ~~~LReaia~~~~~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~G-d~Vlv~~P~y~~~~~~~~~~G~~~~~v  152 (412)
T d1bw0a_          74 SPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAG-DYALVPQPGFPHYETVCKAYGIGMHFY  152 (412)
T ss_dssp             CHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCTHHHHHHHHTTCEEEEE
T ss_pred             CHHHHHHHHHHHHHhcCcccccCCCCCCCeEEEecccccchhhhhhhhhccc-cceeeeeccchhhhhhhhccCcccccc
Confidence            9999999999999865      445788999999999999999999999999 999999999999999999999999999


Q ss_pred             eccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcc---
Q 021547          163 DLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM---  239 (311)
Q Consensus       163 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~---  239 (311)
                      ++..++++..+++.+++..+++++++++++|+||||.+++.+++++|+++|++++++||+||+|..+.|++..+.+.   
T Consensus       153 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~  232 (412)
T d1bw0a_         153 NCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTS  232 (412)
T ss_dssp             EEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCC
T ss_pred             ccccccccchhhHHHHhhhhccccccccccccccccccchhhhccccccccccCCeeeechhhHHHhccCCCCCcccccc
Confidence            99888889999999999999999999999999999999999999999999999999999999999999987544332   


Q ss_pred             -cccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhh
Q 021547          240 -GVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLL  308 (311)
Q Consensus       240 -~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  308 (311)
                       ..++...++++++|+||.|+++|+|+||++++++...  .+.++...........+++.+.|++++..+
T Consensus       233 ~~~~~~~~~~~~~~s~SK~~~~~G~RvG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (412)
T d1bw0a_         233 VADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGN--GPSFLEGLKRVGMLVCGPCTVVQAALGEAL  300 (412)
T ss_dssp             TTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCS--CHHHHHHHHHHHHHHTCSCHHHHHHHHHHH
T ss_pred             ccccccccccccccccCccCccCCCCcccccccchhhc--chhhhhhhccccccccCCchhhhhhccccc
Confidence             2223445689999999999999999999999865322  234555555554444556667676666554

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=100.00  E-value=4.8e-42  Score=316.00  Aligned_cols=276  Identities=23%  Similarity=0.389  Sum_probs=233.8

Q ss_pred             ccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCC
Q 021547           11 FEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFG   88 (311)
Q Consensus        11 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g   88 (311)
                      +.+++|.+.   -.++..+++.+.. +.      .++|||+.|+|+    +++|+.+++++.+++.+.  ..++|+++.|
T Consensus         2 ~~~~~~~~~---~~~~~~~~~~~~~-~~------~~~I~L~~G~Pd----~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G   67 (418)
T d2r5ea1           2 FDLPKRYQG---STKSVWVEYIQLA-AQ------YKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFG   67 (418)
T ss_dssp             CCCCGGGTT---CCCCHHHHHHHHH-HH------HCCEECSSSCCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCTTC
T ss_pred             CchhhhhcC---CCCCHHHHHHHHh-cC------CCCEEccCCCCC----CCCCHHHHHHHHHHHhCCCccCcCCCCCCC
Confidence            445555555   5566666666432 22      478999999975    677899999999998754  2457999999


Q ss_pred             cHHHHHHHHHHHhhcCCCCCC-CCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC
Q 021547           89 LPLARRAVAEYLNRDLPYKLS-ADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE  167 (311)
Q Consensus        89 ~~~lr~~ia~~l~~~~g~~~~-~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~  167 (311)
                      .++||+++|+++++++|..+. .++|++|+|+++++..++.+++++| |.|+++.|+|+.|...+...|.+++.+++.++
T Consensus        68 ~~~lReaiA~~~~~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~  146 (418)
T d2r5ea1          68 HPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEG-DEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPN  146 (418)
T ss_dssp             CHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECEES
T ss_pred             CHHHHHHHHHHHHHHhCCCCCccceEEEcCCCchhhhhhhhhccccc-cceeccccccchhhHHHHHcCCeEEEEEeccc
Confidence            999999999999999999888 4899999999999999999999999 99999999999999999999999999988654


Q ss_pred             C--------CcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcc
Q 021547          168 R--------GWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM  239 (311)
Q Consensus       168 ~--------~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~  239 (311)
                      .        .+..+.+.+.+....+++++++++||||||.+++.+++++|+++|++||++||+||+|..+.+++.+..++
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~  226 (418)
T d2r5ea1         147 KTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRI  226 (418)
T ss_dssp             CCSSCEEGGGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCG
T ss_pred             ccccchhhhhhhhhHHHHhhhhhccccceecCCcCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCccccc
Confidence            3        35678899988888899999999999999999999999999999999999999999999999987666665


Q ss_pred             cccC-CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          240 GVFG-SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       240 ~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      ..+. ...+++++.|+||.|++||+|+||+++++        ++++.+..... ...+++++.|.+++..+.
T Consensus       227 ~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~--------~~i~~~~~~~~~~~~~~~~~~q~a~~~~l~  290 (418)
T d2r5ea1         227 CTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE--------ALLKNLQMVHQNCVYTCATPIQEAIAVGFE  290 (418)
T ss_dssp             GGSTTTGGGEEEEEEHHHHTTCGGGCCEEEESCH--------HHHHHHHHHHTTTTCSCCHHHHHHHHHHHH
T ss_pred             cccccccceeeeeecCCccccCCCcccccccccc--------hhhhhhhhcccccccccccchhhhcccccc
Confidence            5554 35689999999999999999999999864        47777777643 456788888988876653

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=6.4e-42  Score=310.66  Aligned_cols=253  Identities=22%  Similarity=0.326  Sum_probs=223.6

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +|+++|+|+.|+|+    +++|+.+++++.+.+..+. .+|+++.|.++||+++++++++.+|+..+++++++|+|++++
T Consensus        26 ~G~~vI~l~~G~p~----~~~p~~i~~~~~~~~~~~~-~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~~t~G~~~a  100 (375)
T d1o4sa_          26 KGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQA  100 (375)
T ss_dssp             TTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHH
T ss_pred             CCCCeEECCCcCCC----CCCCHHHHHHHHHHHhcCC-cCCCCCcCCHHHHHHHHhhhhhccccccccccccccCcHHHH
Confidence            37889999999965    6789999999999887654 489999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+|+++| |.|+++.|+|+.|.......+...+.++....+++.++.+.++....++++++++++|+||||.+++
T Consensus       101 l~~~~~~l~~~g-d~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~NPTG~~~s  179 (375)
T d1o4sa_         101 LFNAFMALLDPG-DEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYR  179 (375)
T ss_dssp             HHHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHHhCCC-CEEEEccCccccchhhhhccccccccccccccccccchhHHHHHhhccCccEEEEeCCCCCccCCCC
Confidence            999999999999 9999999999999999999999999999888888999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+++|++|+++||+||+|..+.+++.+...+...+..+++|+++|+||.|++||+|+||+++++        ++
T Consensus       180 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G~R~G~~~~~~--------~~  251 (375)
T d1o4sa_         180 REFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSE--------KV  251 (375)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCH--------HH
T ss_pred             HHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEeechhhccCCccccccccccc--------cc
Confidence            9999999999999999999999999998877666555555667799999999999999999999999864        35


Q ss_pred             HHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          283 VGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       283 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      ++.+..... .....+.+.|......++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (375)
T d1o4sa_         252 ATAVSKIQSHTTSCINTVAQYAALKALE  279 (375)
T ss_dssp             HHHHHHHHHHHTCSCCHHHHHHHHHHTT
T ss_pred             hhhhhhhhccccccccccchhhhhhhcc
Confidence            666555533 345667777777666554

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-41  Score=313.25  Aligned_cols=254  Identities=22%  Similarity=0.392  Sum_probs=225.0

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEeCChHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-FNCYAPMFGLPLARRAVAEYLNRDLPYKLSA-DDIYITLGCME  121 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~v~~t~g~~~  121 (311)
                      ++++|+|+.|.|+    +++|+.+++++.+++..+. .++|++..|.++||+++++++++++|+.+++ ++|++|+|+++
T Consensus        24 ~~dvI~l~~G~p~----~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~it~G~~~   99 (418)
T d1w7la_          24 EHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYG   99 (418)
T ss_dssp             TSCCEECCCCSCS----SCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHH
T ss_pred             CCCCEECCCCCCC----CCCCHHHHHHHHHHHhCCCcccCCCCCcCCHHHHHHHHHHHHHHhCCCCCcccceeeccCcHH
Confidence            5689999999975    7789999999999987543 4579999999999999999999989988875 78999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC----------CCCcccCHHHHHhhcCCCccEEEEe
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP----------ERGWEVDLEAVEALADENTAAIVII  191 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~d~~~l~~~l~~~~~~i~i~  191 (311)
                      ++..++++++.+| |.|+++.|+|+.|...+...|.+.+.++..+          +.++.+|.+++.....+.+++++++
T Consensus       100 al~~~~~~l~~~g-~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~i~~~  178 (418)
T d1w7la_         100 ALFTAFQALVDEG-DEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLN  178 (418)
T ss_dssp             HHHHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSEEGGGEECCHHHHHHHCCTTEEEEEEE
T ss_pred             HHHHHHHhhccCC-ceeeccccccchhHHHHHHcCCEeeccccccccccccccccccCcccchhhhhccccccccceecc
Confidence            9999999999999 9999999999999999999999999888654          2456788888888888899999999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEEe
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      +||||||.+++.+++++|+++|++++++||+||+|.++.|++.++.++..+.. .+++|++.|+||.|++||+|+||+++
T Consensus       179 ~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pG~RvG~~v~  258 (418)
T d1w7la_         179 TPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLG  258 (418)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEEC
T ss_pred             CcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHccccccccceecccCccccCCCCccccccc
Confidence            99999999999999999999999999999999999999998877777767654 35899999999999999999999998


Q ss_pred             eCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          271 NDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++        +++.+++.... ...+++.++|.+++.++.+
T Consensus       259 ~~--------~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~  291 (418)
T d1w7la_         259 PD--------HIMKHLRTVHQNSVFHCPTQSQAAVAESFER  291 (418)
T ss_dssp             CH--------HHHHHHHHHHHTTTSCCCHHHHHHHHHHHHH
T ss_pred             ch--------hhhhhhccccccccccccchhhHHHHHHhhh
Confidence            64        47778777744 4678899999999888753

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.8e-41  Score=309.19  Aligned_cols=275  Identities=24%  Similarity=0.323  Sum_probs=227.7

Q ss_pred             hHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHH
Q 021547           14 KQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLAR   93 (311)
Q Consensus        14 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr   93 (311)
                      |+|.+.   -..+.||+++....+ .+ ..|.++|+|+.|+|+    +++|+.+++++.+..  ....+|+++.|.++||
T Consensus         2 ~~r~~~---~~~~~i~~l~~~a~~-~~-~~g~~vi~l~~G~p~----~~~p~~~~~al~~~~--~~~~~Y~~~~G~~~LR   70 (389)
T d2gb3a1           2 SDRVLL---TEESPIRKLVPFAEM-AK-KRGVRIHHLNIGQPD----LKTPEVFFERIYENK--PEVVYYSHSAGIWELR   70 (389)
T ss_dssp             CHHHHS---CCCCTTGGGHHHHHH-HH-HTTCEEEECSSCCCC----SCCCTHHHHHHHHTC--CSSCCCCCTTCCHHHH
T ss_pred             Chhhhc---CCCCHHHHHHHHHHH-HH-HcCCCEEECCCCCCC----CCCCHHHHHHHHhcC--CCCCCCCCCcCCHHHH
Confidence            444444   566778888764322 22 257899999999975    677889999987653  3456899999999999


Q ss_pred             HHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccC
Q 021547           94 RAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVD  173 (311)
Q Consensus        94 ~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  173 (311)
                      +++++++++++|+.+++++|++|+|+++++..++.+++++| |.|+++.|+|+.+...++..|...+.++.... ++..+
T Consensus        71 ~aia~~~~~~~g~~~~~~~I~it~G~~~~l~~~~~~l~~~g-d~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~  148 (389)
T d2gb3a1          71 EAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPG-DEILVLEPFYANYNAFAKIAGVKLIPVTRRME-EGFAI  148 (389)
T ss_dssp             HHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTT-CEEEEEESCCTHHHHHHHHHTCEEEEEECCGG-GTSCC
T ss_pred             HHHHHHHHHhcCCCcccceEEecccccccccccccccccCC-CeEEEeCCCCccccccccccCccccccccccc-cccch
Confidence            99999999999999999999999999999999999999999 99999999999999999999999998886543 34455


Q ss_pred             HHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEec
Q 021547          174 LEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGS  253 (311)
Q Consensus       174 ~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s  253 (311)
                      .+.+.....++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+++..+.....  ..++++++.|
T Consensus       149 ~~~~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~--~~~~~~v~~s  226 (389)
T d2gb3a1         149 PQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSI--ESDKVVVIDS  226 (389)
T ss_dssp             CTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGS--CCTTEEEEEE
T ss_pred             hhhhhhhcccCccEEEeCCCCccccccchHHHHHHHHhhcccCCEEEEEecccccccccccccccccc--cccccccccc
Confidence            56677778889999999999999999999999999999999999999999999999988755444332  3457899999


Q ss_pred             CcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          254 ISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       254 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +||.|++||+|+||++++++       .++...........+++.+.|.++..++..
T Consensus       227 ~sK~~~~~GlRiG~~~~~~~-------~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~  276 (389)
T d2gb3a1         227 VSKKFSACGARVGCLITRNE-------ELISHAMKLAQGRLAPPLLEQIGSVGLLNL  276 (389)
T ss_dssp             STTTTTCGGGCCEEEECSCH-------HHHHHHHHHHHHSCCCCHHHHHHHHHHHTC
T ss_pred             ccccccCcccceeeeeccch-------hHHHHHhhhhhccccccccccccccccccc
Confidence            99999999999999998653       255555555554567788888888877753

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=100.00  E-value=1.3e-40  Score=304.79  Aligned_cols=279  Identities=20%  Similarity=0.245  Sum_probs=229.5

Q ss_pred             cccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCC
Q 021547           10 GFEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMF   87 (311)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~   87 (311)
                      ...+|++.+.   -..+.||++++..       +.+++|+|+.|.|+.  ...+.+.+.+++.+++...  ...+|++..
T Consensus         4 ~~~~~~~~~~---~~~s~ire~~~~~-------~~~~~i~l~~G~P~~--~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~   71 (403)
T d1wsta1           4 DSFFSEKAML---MKASEVRELLKLV-------ETSDVISLAGGLPAP--ETFPVETIKKIAVEVLEEHADKALQYGTTK   71 (403)
T ss_dssp             GGGCCHHHHH---CCCHHHHHHHHHH-------TSSSCEECCCCCCCG--GGSCHHHHHHHHHHHHHHSHHHHHSCCCSS
T ss_pred             HHHHHHHHhc---CCCcHHHHHHHHh-------CCCCcEECCCCCCCc--cccCHHHHHHHHHHHHHhCcccccCCCCCc
Confidence            4456777777   5678899998732       357899999998862  3445678888888877532  345799999


Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE  167 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~  167 (311)
                      |.++||+++++|+++++|.++++++|++|+|+++++..++.+++++| |.|+++.|+|..|...++..|.+++.++.+..
T Consensus        72 G~~~lR~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~g-d~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~  150 (403)
T d1wsta1          72 GFTPLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPG-DPIVVEAPTYLAAIQAFKYYDPEFISIPLDDK  150 (403)
T ss_dssp             CCHHHHHHHHHHHHHHHCCCCTTCEEEEESSHHHHHHHHHHHHCCTT-CEEEEEESCCHHHHHHHHTTCCEEEEEEEETT
T ss_pred             CCHHHHHHHHHHHHHHhCCCCChHHeeecccchHHHHHHHHHHhhcC-CccccCCCcchhhhHHHhhccccceeEeeccc
Confidence            99999999999999999999999999999999999999999999999 99999999999999999999999999987644


Q ss_pred             CCcccCHHHH----HhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          168 RGWEVDLEAV----EALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       168 ~~~~~d~~~l----~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      ..........    ....+....++++++|+||||.+++.+++++|+++|++||++||+||+|..+.|++.+..++...+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~  230 (403)
T d1wsta1         151 GMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFD  230 (403)
T ss_dssp             EECHHHHHHHHHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGC
T ss_pred             CCccccccccchhhhhccccccccccccccCCCCCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccC
Confidence            3322222211    112234566778889999999999999999999999999999999999999999988888887777


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhhc
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ..+++++++|+||.+ ++|+|+||++++.        ++++.+.... ....+++.+.|.+.+.++..
T Consensus       231 ~~~~~i~~~S~SK~~-~~G~RiG~~i~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (403)
T d1wsta1         231 DYGRVIYLGTFSKIL-APGFRIGWVAAHP--------HLIRKMEIAKQSIDLCTNTFGQAIAWKYVEN  289 (403)
T ss_dssp             SSSCEEEEEESTTTT-CGGGCCEEEEECH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHT
T ss_pred             CCCcEEEEcccccee-cCcccccccccch--------HHHHHHHHHHhhhccccccchhhhHHhhhhc
Confidence            788999999999997 5999999999854        4777776653 34567888899888877653

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=100.00  E-value=3.3e-40  Score=301.37  Aligned_cols=234  Identities=19%  Similarity=0.275  Sum_probs=203.8

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .++++|+|+.|+|+    +++|+.+++++.++++.+. .+|++  |.++||+++++|+++++|+++++++|++|+|++++
T Consensus        29 ~g~~vi~l~~g~pd----f~~p~~v~~al~~~~~~~~-~~Y~~--g~~~Lr~aia~~~~~~~g~~~~~~~I~vt~G~~~a  101 (394)
T d1c7na_          29 VGNEVVPLSVADME----FKNPPELIEGLKKYLDETV-LGYTG--PTEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPA  101 (394)
T ss_dssp             CCTTCCCCCSSSCS----SCCCHHHHHHHHHHHHHCC-CSSBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHH
T ss_pred             cCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCC-cCCCC--CCHHHHHHHHHHHHHhcCCCCCCcceEeeccchhh
Confidence            57899999999975    8899999999999987654 37854  78999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC-CCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP-ERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNV  200 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~  200 (311)
                      +..++.+++++| |.|+++.|.|.++....+..|...+.++... +..+.+|.+.++.... ++++++++++||||||.+
T Consensus       102 l~~~~~~~~~pg-d~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~P~NPTG~v  180 (394)
T d1c7na_         102 VFNAVREFTKPG-DGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRV  180 (394)
T ss_dssp             HHHHHHHHCCTT-CEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBC
T ss_pred             hhhhhccccccc-cccccccCcccchhhHHhhhhhcccccccccccccccchhhhhhhhhccccceEEEeccccccccee
Confidence            999999999999 9999999999999999999999999887654 3446788888888664 579999999999999999


Q ss_pred             CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccc
Q 021547          201 LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQ  278 (311)
Q Consensus       201 ~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~  278 (311)
                      ++.+++++|+++|+++|++||+||+|..+.|++..+.+......  ..+++++.|+||.|+++|+|+||++++++     
T Consensus       181 ~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~~~~~-----  255 (394)
T d1c7na_         181 WKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNP-----  255 (394)
T ss_dssp             CCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH-----
T ss_pred             ccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeecccccccccccccccccccccCh-----
Confidence            99999999999999999999999999999998766555443332  35789999999999999999999999764     


Q ss_pred             hhhHHHHHhhhhc
Q 021547          279 KSGIVGSIKACLG  291 (311)
Q Consensus       279 ~~~~~~~~~~~~~  291 (311)
                        .+.+.++....
T Consensus       256 --~i~~~~~~~~~  266 (394)
T d1c7na_         256 --DIRERFTKSRD  266 (394)
T ss_dssp             --HHHHHHHHHHH
T ss_pred             --hhhhhhhhhhh
Confidence              36666666644

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.8e-39  Score=290.39  Aligned_cols=252  Identities=24%  Similarity=0.356  Sum_probs=220.4

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEeCChHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD-DIYITLGCMEA  122 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~g~~~a  122 (311)
                      +.++|||+.|.|+    +++|+.+++++.+.+..+ .++|++..|.++||+++++++++++|+...++ +|++|+|++++
T Consensus        25 ~~~~i~l~~G~Pd----~~~p~~i~~a~~~~~~~~-~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~vt~G~~~a   99 (382)
T d1u08a_          25 QHQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEA   99 (382)
T ss_dssp             HTTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHH
T ss_pred             cCCCEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCcCCHHHHHHHHHHHHHHhCCCCCCCceEEeccchHHH
Confidence            3588999999975    678999999999988764 45899999999999999999999999988776 59999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.+++++| |.|+++.|+|+.+...+...|.....++. ...++.+|++++++..+++++++++++||||||.+++
T Consensus       100 l~~~~~~l~~~g-d~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~i~l~~P~NPtG~v~~  177 (382)
T d1u08a_         100 LYAAITALVRNG-DEVICFDPSYDSYAPAIALSGGIVKRMAL-QPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQ  177 (382)
T ss_dssp             HHHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEEC-CTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHhhccccc-ceEEEecccccchhhhhhhccccceeccc-ccccccCCHHHHhhhhccCccEEEECCCCcccccccc
Confidence            999999999999 99999999999999999999998887775 4567788999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc-CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF-GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      .+++++|+++|.+++++++.|+.|..+.+.+......... ...+++|++.|+||.|++||+|+||+++++        +
T Consensus       178 ~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~~~--------~  249 (382)
T d1u08a_         178 QADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA--------P  249 (382)
T ss_dssp             HHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH--------H
T ss_pred             cccchhhhhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcccchhhhccc--------h
Confidence            9999999999999999999999999988765444333322 234579999999999999999999999864        4


Q ss_pred             HHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          282 IVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       282 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++.+..... ...+++.+.|.+++.++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~  279 (382)
T d1u08a_         250 ISAEIRKVHQYLTFSVNTPAQLALADMLRA  279 (382)
T ss_dssp             HHHHHHHHHHHHTSSCCHHHHHHHHHHHHH
T ss_pred             hHHHHHhhhccccccccccccccccccccc
Confidence            7777766643 4578899999999998864

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1e-39  Score=300.41  Aligned_cols=275  Identities=17%  Similarity=0.223  Sum_probs=225.8

Q ss_pred             ccchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCC
Q 021547           11 FEVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS--MFNCYAPMFG   88 (311)
Q Consensus        11 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g   88 (311)
                      .++|+..+.   ..++.||++++.       ..++++|+|+.|.|+  +...+.+.+.+++.++++..  ...+|+++.|
T Consensus        14 ~~~s~~~~~---~~~s~ir~~~~~-------~~~~~~I~l~~G~Pd--~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G   81 (420)
T d1vp4a_          14 GKISKIGQN---MKSSIIREILKF-------AADKDAISFGGGVPD--PETFPRKELAEIAKEIIEKEYHYTLQYSTTEG   81 (420)
T ss_dssp             HHCCHHHHT---CCCCCHHHHTTT-------TTSTTCEECCCCSCC--GGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTC
T ss_pred             HHHhHHHHh---CCCcHHHHHHHH-------hCCCCcEecCCcCCC--CccCCHHHHHHHHHHHHhhCCccccCCCCCcC
Confidence            346666666   677889988752       146899999999886  23445677888888877643  3458999999


Q ss_pred             cHHHHHHHHHHHhhcCCCC-CCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCC
Q 021547           89 LPLARRAVAEYLNRDLPYK-LSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPE  167 (311)
Q Consensus        89 ~~~lr~~ia~~l~~~~g~~-~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~  167 (311)
                      .++||++|++++++++|+. +++++|++|+|+++++.+++.+++++| |.|+++.|+|..|...++..|.+++.++.++ 
T Consensus        82 ~~~LR~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~G-d~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-  159 (420)
T d1vp4a_          82 DPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDE-SYCVLDDPAYLGAINAFRQYLANFVVVPLED-  159 (420)
T ss_dssp             CHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTT-CEEEEEESCCHHHHHHHHTTTCEEEEEEEET-
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCHHHeEeccchhhhHHHHHHhhhccc-cccccccccccchhHHHHHHhhhcccccccc-
Confidence            9999999999999999985 789999999999999999999999999 9999999999999999999999999998753 


Q ss_pred             CCcccCHHHHHhhc---------CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc
Q 021547          168 RGWEVDLEAVEALA---------DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP  238 (311)
Q Consensus       168 ~~~~~d~~~l~~~l---------~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~  238 (311)
                        .+++++.++..+         +..+.++++++|+||||.+++.+++++|+++|++++++||+||+|..+.|++....+
T Consensus       160 --~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~  237 (420)
T d1vp4a_         160 --DGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDP  237 (420)
T ss_dssp             --TEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCC
T ss_pred             --cccccchhhhhhhhhHHHhhccccceeeEecCCCCccchhhhhhhhhhhhhhhhcccccccccchhhhccccCccccc
Confidence              346776654432         123345567789999999999999999999999999999999999999998776666


Q ss_pred             ccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhhc
Q 021547          239 MGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       239 ~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  310 (311)
                      .......+++++++|+||.+ ++|+|+||+++++        ++++++..... ...+++.+.|++++.++++
T Consensus       238 ~~~~~~~~~~i~~~s~sk~~-~~G~RiG~~~~~~--------~~i~~l~~~~~~~~~~~~~~~q~~~a~~l~~  301 (420)
T d1vp4a_         238 IFKIGGPERVVLLNTFSKVL-APGLRIGMVAGSK--------EFIRKIVQAKQSADLCSPAITHRLAARYLER  301 (420)
T ss_dssp             HHHHHCTTTEEEEEESTTTT-CGGGCEEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred             ccccccccceeEEecccccc-ccccccccccccc--------hhhhhhhhhhhhccccCchhhhhhhhhhccc
Confidence            66666677899999999985 6999999998854        47888776644 4568899999998887753

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.6e-39  Score=288.19  Aligned_cols=219  Identities=20%  Similarity=0.308  Sum_probs=197.5

Q ss_pred             eeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHH
Q 021547           47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEII  126 (311)
Q Consensus        47 ~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~  126 (311)
                      +|+|++|+|+    +++|+.+++++.+.+..+.+ +|++..| +++|+++++++++++|.++++++|++|+|+++++..+
T Consensus         1 ~~~~~~~~~d----f~~p~~i~eal~~~~~~~~~-~Y~~~~g-~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~   74 (361)
T d1d2fa_           1 LLPFTISDMD----FATAPCIIEALNQRLMHGVF-GYSRWKN-DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSEL   74 (361)
T ss_dssp             CEECCSSSCS----SCCCHHHHHHHHHHHTTCCC-CCCCSCC-HHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHH
T ss_pred             CcCcCCCCCC----CCCCHHHHHHHHHHHhCCCC-CCCCCCC-HHHHHHHHHHHHHHhCCCCCcceEEEeCCHHHHHHHH
Confidence            5899999975    88999999999999876654 8998888 7899999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC-CCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCCHH
Q 021547          127 LTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP-ERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQ  204 (311)
Q Consensus       127 ~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~  204 (311)
                      +.+++++| |+|++++|+|.+|...++..|.+++.++... .+++.+|++.+++.+. ++++++++++|+||||.+++.+
T Consensus        75 ~~~l~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~  153 (361)
T d1d2fa_          75 IRQWSETG-EGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCD  153 (361)
T ss_dssp             HHHSSCTT-CEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTT
T ss_pred             hhhccccc-cccccccccccchhHHHHhhcceEEeecccccccccccccccchhhcccCCceeEEecccccccccccchh
Confidence            99999999 9999999999999999999999999988765 3557799999999774 5889999999999999999999


Q ss_pred             HHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          205 HLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       205 ~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      ++++|+++|+++|++||+||+|..+.|++....++.... .++++++.|+||.|+++|+|+||++++++
T Consensus       154 ~~~~i~~~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~v~~~s~SK~~~~~g~R~g~~~~~~~  221 (361)
T d1d2fa_         154 ELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVA-RGDWALLTSGSKSFNIPALTGAYGIIENS  221 (361)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTC-CSSEEEEECSHHHHTCGGGCCEEEEECSH
T ss_pred             hhhhhhhhhhhhheeeeeccccccccccccccccccccc-ccccccccccccccccccccceeeecchh
Confidence            999999999999999999999999999876666665543 45789999999999999999999988653

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=100.00  E-value=7.2e-39  Score=293.11  Aligned_cols=283  Identities=14%  Similarity=0.125  Sum_probs=222.4

Q ss_pred             HhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHH
Q 021547           22 EAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDP-AAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYL  100 (311)
Q Consensus        22 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l  100 (311)
                      +++++.|+.+++...    +...+++|||+.|.+ +..+..++.+.+++++.+....+..++|.+..|.++||+++++++
T Consensus         9 ~~p~d~i~~~~~~~~----~d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~   84 (401)
T d7aata_           9 MGPPDPILGVTEAFK----RDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELA   84 (401)
T ss_dssp             CCCCCHHHHHHHHHH----HCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHH
T ss_pred             CCCCChHHHHHHHHh----CCCCCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            356788998886532    224577899999942 112345667999999998887776668999999999999999999


Q ss_pred             hhcCCCCCCCCCEEEeCChH-----HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHH
Q 021547          101 NRDLPYKLSADDIYITLGCM-----EAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLE  175 (311)
Q Consensus       101 ~~~~g~~~~~~~v~~t~g~~-----~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  175 (311)
                      .++++....+++++++.++.     .++..++++++++| |+|++++|+|+.|...++..|.+++.+++.+++++..+.+
T Consensus        85 ~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pG-d~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~  163 (401)
T d7aata_          85 LGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFS-RDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFT  163 (401)
T ss_dssp             HCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTC-CEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHH
T ss_pred             hccCCcccCcCceEEeccchHHHHHHHHHHhhHhhcCCC-ceEEEecCCCcchhhHHHHcCCeEEEEeccccccccccHH
Confidence            99888777888887765443     46777888899999 9999999999999999999999999999988888899998


Q ss_pred             HHHhhc---CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcc---cccCCCCCeE
Q 021547          176 AVEALA---DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM---GVFGSIVPVI  249 (311)
Q Consensus       176 ~l~~~l---~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~---~~~~~~~~~i  249 (311)
                      .+.+.+   .++++++++++||||||.+++.+++++|+++|++|+++||+||+|..+.|++......   .......+++
T Consensus       164 ~~~~~~~~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~  243 (401)
T d7aata_         164 GAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVV  243 (401)
T ss_dssp             HHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCE
T ss_pred             HHHHHHhcCCCceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhhcccc
Confidence            887765   3578899999999999999999999999999999999999999999999976432221   1112344679


Q ss_pred             EEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547          250 TLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       250 ~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.|+||.++++|+|+||++++.... .....+...+... .....+++.+.|++++.++++
T Consensus       244 ~~~s~sk~~~~~G~RiG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  304 (401)
T d7aata_         244 LSQSYAKNMGLYGERAGAFTVICRDA-EEAKRVESQLKILIRPMYSNPPMNGARIASLILNT  304 (401)
T ss_dssp             EEEECTTTSCCGGGCEEEEEEECSSH-HHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHC
T ss_pred             eeEeccccceeeccccceeecchHHH-HHHHHHHHHHHHHhhccccccchHHHHHHHHhcCC
Confidence            99999999999999999999976421 0001111122211 223467888999999888765

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-37  Score=281.51  Aligned_cols=265  Identities=25%  Similarity=0.350  Sum_probs=218.0

Q ss_pred             cchHHhhHHHHhhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH
Q 021547           12 EVKQELNREREAEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPL   91 (311)
Q Consensus        12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~   91 (311)
                      +++.|.+.   ...+-+.++. .++++      .++|||+.|+|+    +++|+.+++++.+.+.+  ..+|+++.|..+
T Consensus         2 ~~~~~~~~---~~~~~~~~~~-~la~~------~~~I~ls~g~p~----~~~p~~i~~al~~~l~~--~~~Y~~~~G~~e   65 (368)
T d1v2da_           2 RLHPRTEA---AKESIFPRMS-GLAQR------LGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLPA   65 (368)
T ss_dssp             CCCGGGGG---C---CHHHHH-HHHHH------HTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCHH
T ss_pred             CCChhhhh---cCCCHHHHHH-HHhcc------CCCEEecCCCCC----CCCCHHHHHHHHHHhhc--ccCCCCCcCCHH
Confidence            44555544   4444444443 44333      368999999975    78899999999998864  358999999999


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC-CCCc
Q 021547           92 ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP-ERGW  170 (311)
Q Consensus        92 lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~  170 (311)
                      ||+++++++      ++++++|++|+|+++++..++.+++.+| |.|+++.|+|..+...++..|.+++.++++. .+++
T Consensus        66 lr~aiA~~~------~~~~~~Iiit~G~~~al~~~~~~l~~~~-d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  138 (368)
T d1v2da_          66 LREALAEEF------AVEPESVVVTSGATEALYVLLQSLVGPG-DEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGF  138 (368)
T ss_dssp             HHHHHHHHH------TSCGGGEEEESSHHHHHHHHHHHHCCTT-CEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEE
T ss_pred             HHHHHHhhc------ccCCcceeeccchHHHHHHHhhcccccc-ccccccCCcchhhhhHHHhcCCccceeccccccccc
Confidence            999999999      4688999999999999999999999999 9999999999999999999999999888754 3567


Q ss_pred             ccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547          171 EVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT  250 (311)
Q Consensus       171 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  250 (311)
                      .+|.+.+++.++++++++++++|+||||.+++.+++++|+++|++||+++|+|++|..+.+....+...  ....++.++
T Consensus       139 ~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~--~~~~~~~~~  216 (368)
T d1v2da_         139 RLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLR--EFAPERTFT  216 (368)
T ss_dssp             ECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHH--HHCTTTEEE
T ss_pred             cCCHHHHHHhhccCceEEEEcCCCCcccccCCHHHHHHHHHHHHHcCCeeeechhhhhhcccccccccc--cccccccce
Confidence            899999999999999999999999999999999999999999999999999999999876654333222  223456788


Q ss_pred             EecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          251 LGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      +.|+||.++++|+|+||++++++        +++.+..... ...+++++.|.+++.+++
T Consensus       217 ~~~~sk~~~~~G~R~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  268 (368)
T d1v2da_         217 VGSAGKRLEATGYRVGWIVGPKE--------FMPRLAGMRQWTSFSAPTPLQAGVAEALK  268 (368)
T ss_dssp             EEEHHHHTTCGGGCCEEEECCTT--------THHHHHHHHHHHTSSCCHHHHHHHHHHHH
T ss_pred             eeccccccccccccccccccccc--------ccchhhhhhhccccccccccccccccccc
Confidence            99999999999999999988653        5666666533 456889999999888775

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=100.00  E-value=5.3e-38  Score=289.93  Aligned_cols=252  Identities=21%  Similarity=0.326  Sum_probs=201.5

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHh------c-----CCCCCCCCCCCcHHHHHHHHHHHhhcCCC--CCCC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVR------S-----SMFNCYAPMFGLPLARRAVAEYLNRDLPY--KLSA  110 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~------~-----~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~--~~~~  110 (311)
                      +.++|+|+.+++.    + +.+.+.+.+.+...      .     .....|+++.|.++||+++|+|+++.+|.  .+++
T Consensus        35 p~G~i~l~~~en~----l-~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~p  109 (431)
T d1m7ya_          35 TNGIIQMGLAENQ----L-CFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDP  109 (431)
T ss_dssp             TTSBEECSSCCCC----S-CHHHHHHHHHHCCTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCG
T ss_pred             CCcEEEeeccccc----c-cHHHHHHHHHhCCchhhhhhhhhhccHHhcCCcCCcCcHHHHHHHHHHHHHHhCCCCCCCc
Confidence            5669999999753    1 34555555543211      0     01226999999999999999999998874  5678


Q ss_pred             CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHH-cCcEEEEeeccCCCCcccCHHHHHhhcC------C
Q 021547          111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKR-NHIEVRHFDLLPERGWEVDLEAVEALAD------E  183 (311)
Q Consensus       111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~l~------~  183 (311)
                      ++|++|+|+++++..++.+++++| |+|+++.|+|..+...+.. .|.+++.+++..++++.+|.+.+++.+.      .
T Consensus       110 e~I~it~G~~~al~~~~~~l~~pG-d~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~  188 (431)
T d1m7ya_         110 NHLVLTAGATSANETFIFCLADPG-EAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNL  188 (431)
T ss_dssp             GGEEEEEHHHHHHHHHHHHHCCTT-CEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTC
T ss_pred             ceEEECCCHHHHHHHHHHHhcCCC-CEEEEeCCCchhHHHHHHHhcCceeccccccchhcccccHHHhhhhhhhhhhccC
Confidence            999999999999999999999999 9999999999998887764 5799999998878888999998887654      3


Q ss_pred             CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC----------CCCeEEEec
Q 021547          184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS----------IVPVITLGS  253 (311)
Q Consensus       184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~----------~~~~i~i~s  253 (311)
                      +++++++++|+||||.+++.+++++|+++|+++|++||+||+|+.+.|++.++.++..+..          .+++|+++|
T Consensus       189 ~~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s  268 (431)
T d1m7ya_         189 RVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYS  268 (431)
T ss_dssp             CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEE
T ss_pred             cceEEEecCccccccccccccccccccccccccCcceeecccccccccCCCCCCCHHHHhhhcccccccccCceEEEEec
Confidence            6789999999999999999999999999999999999999999999998776665443321          247999999


Q ss_pred             CcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          254 ISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       254 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +||.|+++|+|+||++++++        ++............++...|.++++.+.
T Consensus       269 ~SK~~~~~G~RiG~~~~~~~--------~i~~~~~~~~~~~~~~~~~~~~~~a~l~  316 (431)
T d1m7ya_         269 LSKDLGLPGFRVGAIYSNDD--------MVVAAATKMSSFGLVSSQTQHLLSAMLS  316 (431)
T ss_dssp             SSSSSCCGGGCEEEEEESCH--------HHHHHHHHHGGGSCCCHHHHHHHHHHHH
T ss_pred             CcccccCCCCccceeccchh--------hhHHHHHHHhccccccccccchhhhhhc
Confidence            99999999999999998642        4444333333344566667777766654

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=100.00  E-value=2.4e-37  Score=285.23  Aligned_cols=253  Identities=20%  Similarity=0.342  Sum_probs=204.4

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcC----------CCCCCCCCCCcHHHHHHHHHHHhhcCCC--CCCC
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSS----------MFNCYAPMFGLPLARRAVAEYLNRDLPY--KLSA  110 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~----------~~~~Y~~~~g~~~lr~~ia~~l~~~~g~--~~~~  110 (311)
                      ++.++|+|+.+.+.     ..+..+.+.+.+.....          ...+|++..|.++||++||+|+++++|.  .+++
T Consensus        34 np~G~i~l~~aen~-----l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~~  108 (428)
T d1iaya_          34 NPNGVIQMGLAENQ-----LCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDP  108 (428)
T ss_dssp             STTSBEECSSCCCC-----SSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCT
T ss_pred             CCCceEEeecccCc-----cchHHHHHHHHhCCchhhhHhHhhhCHHhccCcCCcchHHHHHHHHHHHHHHhCCCCCCCh
Confidence            35779999999743     23455555554322110          1236999999999999999999998875  5678


Q ss_pred             CCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHH-cCcEEEEeeccCCCCcccCHHHHHhh------cCC
Q 021547          111 DDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKR-NHIEVRHFDLLPERGWEVDLEAVEAL------ADE  183 (311)
Q Consensus       111 ~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~------l~~  183 (311)
                      ++|++|+|+++++..++.+++++| |+|+++.|+|..|...+.. .|.+++.+++...+++.+|.+.++..      ...
T Consensus       109 e~Ivit~G~~~al~~~~~~l~~~G-d~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~~~~~~  187 (428)
T d1iaya_         109 ERVVMAGGATGANETIIFCLADPG-DAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNI  187 (428)
T ss_dssp             TSCEEEEHHHHHHHHHHHHHCCTT-CEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTC
T ss_pred             hhEEEcCCHHHHHHHHHHHhCCCC-CEEEEccCCchHHHHHHHHhcCCeEEEeecccccccccccccccchhhhhhccCC
Confidence            999999999999999999999999 9999999999999877764 58999999988888899999887654      345


Q ss_pred             CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccccc--------CCCCCeEEEecCc
Q 021547          184 NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVF--------GSIVPVITLGSIS  255 (311)
Q Consensus       184 ~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~--------~~~~~~i~i~s~s  255 (311)
                      +++++++++|+||||.+++.+++++|+++|++||++||+||+|+.+.|++.++.++..+        ...+++++++|+|
T Consensus       188 ~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~S  267 (428)
T d1iaya_         188 KVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLS  267 (428)
T ss_dssp             CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEEST
T ss_pred             CceEEEEccCCCcccccccccccchhheeeccCcEEEEecccccccccCcccccccccccchhhccccccceEEEEecCC
Confidence            78899999999999999999999999999999999999999999999988776665433        2345799999999


Q ss_pred             ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      |.|+++|+|+||++++++       .+.+.++..... ..++...|.++++.+.
T Consensus       268 K~~~~~GlRiG~~~~~~~-------~l~~~~~~~~~~-~~~~~~~~~~~~a~l~  313 (428)
T d1iaya_         268 KDMGLPGFRVGIIYSFND-------DVVNCARKMSSF-GLVSTQTQYFLAAMLS  313 (428)
T ss_dssp             TTSSCGGGCEEEEEESCH-------HHHHHHHHHHTT-SCCCHHHHHHHHHHTT
T ss_pred             CcccCCCccccccccccc-------chhhhhhhhhcc-cccccccccchhhhhh
Confidence            999999999999998653       356666655543 3566777777766654

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.7e-37  Score=281.31  Aligned_cols=276  Identities=16%  Similarity=0.128  Sum_probs=213.8

Q ss_pred             hHHHHHHHHHhhhccCCCCCeeecCCC---CCCCCCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCcHHHHHHHHHHHhh
Q 021547           27 AFRYAIVSLMESVDKNDPRPVIPLGHG---DPAAFPCFRTAAVAEDAIVDSVRS-SMFNCYAPMFGLPLARRAVAEYLNR  102 (311)
Q Consensus        27 ~i~~~~~~~~~~~~~~~~~~~i~~~~g---~p~~~~~~~~~~~~~~a~~~~~~~-~~~~~Y~~~~g~~~lr~~ia~~l~~  102 (311)
                      .|+.+++++    ++.+.++.||+++|   ++.  ...+..+.++++....... .....|.+..|+++||+++++++.+
T Consensus        12 pi~~~~~~~----~~d~~~~kInL~iG~~~d~~--g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia~~~~~   85 (397)
T d3tata_          12 PILTLMERF----KEDPRSDKVNLSIGLYYNED--GIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFG   85 (397)
T ss_dssp             TTTTHHHHH----HHSCCSSCEECSCCSCCCTT--SSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHHHHHTC
T ss_pred             cHHHHHHHH----hcCCCCCcEEccCCCCcCCC--CCCCCcHHHHHHHHHHHhCcccCCCCCCcccCHHHHHHHHHHHhh
Confidence            455555543    22235667999999   333  2356678999987766543 2345799999999999999999999


Q ss_pred             cCCCCCCCCCEEEeCChHHH----HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHH
Q 021547          103 DLPYKLSADDIYITLGCMEA----VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVE  178 (311)
Q Consensus       103 ~~g~~~~~~~v~~t~g~~~a----~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~  178 (311)
                      +++..+..++++++.|++++    +.+++..++.+| |.|++++|+|++|...++..|.+++.+++..++++..+.+.+.
T Consensus        86 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~pg-d~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~  164 (397)
T d3tata_          86 ADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPE-SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLL  164 (397)
T ss_dssp             SSCHHHHTTCEEECCBSHHHHHHHHHHHHHHHHCSS-CCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCCHHHHH
T ss_pred             ccCCcCCcCcEEEecCchhHHHHHHHHHHhhhcCCC-CcceecccCccccHHHHHHcCCEEEEEecchhhccccchHHHH
Confidence            88888888999887776654    556666778899 9999999999999999999999999999988888888888877


Q ss_pred             hhc---CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc-cc-ccCCCCCeEEEec
Q 021547          179 ALA---DENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP-MG-VFGSIVPVITLGS  253 (311)
Q Consensus       179 ~~l---~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~-~~-~~~~~~~~i~i~s  253 (311)
                      +.+   .++++++++++||||||.+++.+++++|+++|++++++||+||+|..+.|++....+ +. ......++|++.|
T Consensus       165 ~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i~~~s  244 (397)
T d3tata_         165 ATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNS  244 (397)
T ss_dssp             HHHTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCEECBC
T ss_pred             HHhhhcccccEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhcCCceEEEec
Confidence            654   357888999999999999999999999999999999999999999999987533222 11 1233457899999


Q ss_pred             CcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547          254 ISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       254 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +||.|+++|+|+||++++...... ...+...+... .....+++...|++++.++.+
T Consensus       245 ~SK~~~~~G~RiG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~  301 (397)
T d3tata_         245 FSKIFSLYGERVGGLSVMCEDAEA-AGRVLGQLKATVRRNYSSPPNFGAQVVAAVLND  301 (397)
T ss_dssp             CHHHHTBTTTCCBCCEEECSSTTH-HHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHS
T ss_pred             CcccccccCccccccccchhHHHH-HHHHHHHHHHHhhcccccccHHHHHHHHHhcCC
Confidence            999999999999999987653211 11222233322 334567888999998887754

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.6e-36  Score=274.63  Aligned_cols=279  Identities=18%  Similarity=0.133  Sum_probs=202.3

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCC---CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHH
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHG---DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEY   99 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g---~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~   99 (311)
                      ++++.|+.+++.+    ++...++.|||+.|   ++.  +..+.++.|++++.++.+.+..++|.+..|+++||++++++
T Consensus         8 ~p~d~i~~~~~~~----~~d~~~~kInL~iG~~~d~~--g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~~   81 (396)
T d2q7wa1           8 APADPILGLADLF----RADERPGKINLGIGVYKDET--GKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQEL   81 (396)
T ss_dssp             CCC---------------------CEESSCCSCCCTT--SCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCChHHHHHHHH----hccCCCCcEEeeCCCccCCC--CCCCCCHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHH
Confidence            4466777776543    22235677999999   433  34567799999999888777777899999999999999999


Q ss_pred             HhhcCCCCCCCCCE--EEeCChHHHHHHHHHH--HhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHH
Q 021547          100 LNRDLPYKLSADDI--YITLGCMEAVEIILTV--ITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLE  175 (311)
Q Consensus       100 l~~~~g~~~~~~~v--~~t~g~~~a~~~~~~~--l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  175 (311)
                      +.++++.....+.+  ++|.|++.++.+++..  +..+| |.|++++|+|++|...++..|.+++.++...++++..+..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g-d~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~  160 (396)
T d2q7wa1          82 LFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSV-KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD  160 (396)
T ss_dssp             HHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCC-CEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHH
T ss_pred             HHhhcCCcccccceeeeccchHHHHHHHHHHHHhhcccc-eEEEEecCCCccchHHHHHcCCeeEecccccccccccccc
Confidence            99887766656554  3466666666555444  46799 9999999999999999999999999999988877777777


Q ss_pred             HHHhh---cCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCccc-c-cCCCCCeEE
Q 021547          176 AVEAL---ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMG-V-FGSIVPVIT  250 (311)
Q Consensus       176 ~l~~~---l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~-~-~~~~~~~i~  250 (311)
                      .+.+.   ..++++++++++||||||.+++.+++++|+++|++|+++||+||+|..+.|++....... . .....++++
T Consensus       161 ~~~~~~~~~~~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~  240 (396)
T d2q7wa1         161 ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIV  240 (396)
T ss_dssp             HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEE
T ss_pred             hHHHHHHHhccCcEEEEecCCcCCcCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhhcccccc
Confidence            66654   345788889999999999999999999999999999999999999999998754332211 1 122446799


Q ss_pred             EecCcccCCCCcceeeEEEeeCCCCccch-hhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547          251 LGSISKRWIVPGWRFGWLATNDPNGVLQK-SGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +.|+||.|+++|+|+||++++...  ... ..+....... .....+++...|.++..++.+
T Consensus       241 ~~s~sk~~~~~G~R~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~  300 (396)
T d2q7wa1         241 ASSYSKNFGLYNERVGACTLVAAD--SETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN  300 (396)
T ss_dssp             EEECTTTTTCGGGCCEEEEEECSS--HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTS
T ss_pred             cccccccccccCCCccccccchhH--HHHHHHhhhhhhhhhhccccCCCHHHHHHHHHHhcC
Confidence            999999999999999999997642  110 0111111111 234467888888888877754

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=100.00  E-value=1.3e-35  Score=272.36  Aligned_cols=281  Identities=16%  Similarity=0.121  Sum_probs=210.4

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCC---CCCCCCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCcHHHHHHHHH
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHG---DPAAFPCFRTAAVAEDAIVDSVRS-SMFNCYAPMFGLPLARRAVAE   98 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g---~p~~~~~~~~~~~~~~a~~~~~~~-~~~~~Y~~~~g~~~lr~~ia~   98 (311)
                      .+++.|+.+.+.+    ++.+.+++|||++|   ++.  ...+..+.|+++.+..... ...++|.+..|.++||+++++
T Consensus        11 ~~~d~i~~~~~~~----~~d~~~~kInL~iG~~~d~~--g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~aia~   84 (412)
T d1yaaa_          11 LPPDALFGIKQRY----GQDQRATKVDLGIGAYRDDN--GKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAK   84 (412)
T ss_dssp             CCCCTTHHHHHHH----HTCCCSSCEECSSCCCBCTT--SCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHH
T ss_pred             CCCChHHHHHHHH----hcCCCCCcEEeecCCCcCCC--CCCCCcHHHHHHHHHHHhCcccCCCCCCCCCCHHHHHHHHH
Confidence            5566777777543    33345678999999   443  2345668898886655433 345579999999999999999


Q ss_pred             HHhhcCCCCCCCCCEEEe--CChHHHHHHH--HHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCH
Q 021547           99 YLNRDLPYKLSADDIYIT--LGCMEAVEII--LTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDL  174 (311)
Q Consensus        99 ~l~~~~g~~~~~~~v~~t--~g~~~a~~~~--~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  174 (311)
                      ++.+.++.....+.++++  .|+..++..+  +..+..+| |.|++++|+|+.|...++..|.+++.++...++++..+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-d~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~~~~~~  163 (412)
T d1yaaa_          85 IIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPD-KLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDL  163 (412)
T ss_dssp             HHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTT-CCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECH
T ss_pred             HHhcccCccccccceeEEecccchhHHHHHHHHHhccCCC-CEEecccccCchhHHHHHHcCCceecccccccccccccc
Confidence            998877755555555443  3444444333  34456799 999999999999999999999999999988888888898


Q ss_pred             HHHHhhcC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcc------cccCCC
Q 021547          175 EAVEALAD---ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPM------GVFGSI  245 (311)
Q Consensus       175 ~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~------~~~~~~  245 (311)
                      +.+...+.   ++++++++++||||||.+++.+++++|+++|++++++||+||+|..+.|++....+.      ......
T Consensus       164 ~~~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~  243 (412)
T d1yaaa_         164 NGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTV  243 (412)
T ss_dssp             HHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTT
T ss_pred             hhhhcccccCCCceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhhhccccC
Confidence            88877553   466788999999999999999999999999999999999999999999976432221      223445


Q ss_pred             CCeEEEecCcccCCCCcceeeEEEeeCCCCccch---hhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547          246 VPVITLGSISKRWIVPGWRFGWLATNDPNGVLQK---SGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       246 ~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      +++|++.|+||.|+++|+|+||++++.+......   ..+....... .....+++.++|.+++.++++
T Consensus       244 ~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  312 (412)
T d1yaaa_         244 SPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLET  312 (412)
T ss_dssp             CCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHS
T ss_pred             CCeEEEEecCCccccCcCceEEEEEchhhhhhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHhcC
Confidence            6899999999999999999999999865322110   0111112222 344578899999999988765

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=100.00  E-value=2.3e-35  Score=270.65  Aligned_cols=280  Identities=15%  Similarity=0.097  Sum_probs=208.7

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCC---CCCCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCCCCcHHHHHHHHH
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHG---DPAAFPCFRTAAVAEDAIVDSVRSS-MFNCYAPMFGLPLARRAVAE   98 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g---~p~~~~~~~~~~~~~~a~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~   98 (311)
                      .+++.|+.++..+    ++...+++|||++|   ++.  ...+..|.|++++....... ..++|.+..|.++||+++++
T Consensus        12 ~~~~~i~~l~~~~----~~d~~~~~Inl~iG~~~d~~--g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G~p~lreaia~   85 (412)
T d1ajsa_          12 AQPVLVFKLIADF----REDPDPRKVNLGVGAYRTDD--CQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASR   85 (412)
T ss_dssp             CCCCHHHHHHHHH----HTCCCTTCEECCSCCCCCTT--SCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHH
T ss_pred             CCCChHHHHHHHH----hcCCCCCcEEeeCCCCcCCC--CCCCCcHHHHHHHHHHHhCCCcCCCCCCCCCCHHHHHHHHH
Confidence            4456788777653    23345778999999   433  34567788988877665533 35579999999999999999


Q ss_pred             HHhhcCCCCCCCCCEE--EeCChHHHHHHHHHHH-------hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeec-cCCC
Q 021547           99 YLNRDLPYKLSADDIY--ITLGCMEAVEIILTVI-------TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDL-LPER  168 (311)
Q Consensus        99 ~l~~~~g~~~~~~~v~--~t~g~~~a~~~~~~~l-------~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~~  168 (311)
                      ++.+.++..+..+++.  .|.|++.++..+..++       +++| |+|++++|+|++|...++..|.+.+.++. ....
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pG-d~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~~~~~  164 (412)
T d1ajsa_          86 LALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKD-TPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTE  164 (412)
T ss_dssp             HHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCC-SCEEEEESCCTHHHHHHHHTTCSCEEEEECEETT
T ss_pred             HHhccCCcccccccceeecccchhhHHHHHHHHHHHHhhhcCCCC-CEEEEeCCcchhhHHHHHHcCCeEEEeecccccc
Confidence            9998777766666654  4566666665554444       5799 99999999999999999999998665543 3455


Q ss_pred             CcccCHHHHHhh---cCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCc---cccc
Q 021547          169 GWEVDLEAVEAL---ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIP---MGVF  242 (311)
Q Consensus       169 ~~~~d~~~l~~~---l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~---~~~~  242 (311)
                      .+..|.+.+++.   ..++++++++++||||||.+++.+++++|+++|++||++||+||+|..+.|++.....   ....
T Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~  244 (412)
T d1ajsa_         165 KRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFV  244 (412)
T ss_dssp             TTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHH
T ss_pred             cccccHHHHHHHHHhccCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhhhhhhh
Confidence            667888776664   4568889999999999999999999999999999999999999999999987643222   1222


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ....+++++.|+||.++++|+|+||++++.... .....+...+... .....+++.+.|.+++.++.+
T Consensus       245 ~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (412)
T d1ajsa_         245 SEGFELFCAQSFSKNFGLYNERVGNLTVVAKEP-DSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSD  312 (412)
T ss_dssp             HTTCCEEEEEECTTTSCCGGGCEEEEEEECSSH-HHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHS
T ss_pred             hhcccccccccccccccCCCCCccccccchhHH-HHHHHHHHHHHHHhhccccccchHHHHHHHHHhcC
Confidence            344578999999999999999999999976431 1011122222222 234567888999999888754

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=4.1e-35  Score=267.33  Aligned_cols=282  Identities=18%  Similarity=0.124  Sum_probs=209.8

Q ss_pred             hhhhhHHHHHHHHHhhhccCCCCCeeecCCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHh
Q 021547           23 AEVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPA-AFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLN  101 (311)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~-~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~  101 (311)
                      +..+.|+.++..+.    +...++.|||++|.+. ..+..++++.+++++++..+.+..++|.+..|+++||+++++++.
T Consensus         8 ~~~d~i~~l~~~~~----~d~~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~~~~   83 (394)
T d2ay1a_           8 QAPDKILALMGEFR----ADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELIL   83 (394)
T ss_dssp             CCCCSHHHHHHHHH----HCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHh----CCCCCCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHh
Confidence            44567888776542    2245678999999321 123456779999999998877666689999999999999999998


Q ss_pred             hcCCCCCCCCCEEEeCCh-HHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhh
Q 021547          102 RDLPYKLSADDIYITLGC-MEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEAL  180 (311)
Q Consensus       102 ~~~g~~~~~~~v~~t~g~-~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~  180 (311)
                      +..+.....+.+++++|+ ..++.+.+..+..+| |.|++++|+|+.|...++..|.+++.++...+.++..+.+.+++.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g-d~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~  162 (394)
T d2ay1a_          84 GDGLKSETTATLATVGGTGALRQALELARMANPD-LRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKAD  162 (394)
T ss_dssp             GGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTT-CCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHH
T ss_pred             ccccccccccceeccCchHHHHHHHHHhhhcCCc-eEEEEecccccchHHHHHHcCCEEEEecccchhcccccchhHHHH
Confidence            766654444444444443 333556666777899 999999999999999999999999999987777777777666554


Q ss_pred             ---cCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccc--cCCCCCeEEEecCc
Q 021547          181 ---ADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGV--FGSIVPVITLGSIS  255 (311)
Q Consensus       181 ---l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~--~~~~~~~i~i~s~s  255 (311)
                         ..++++++++++||||||.+++.+++++|+++|++++++||+||+|..+.|++....++..  .....+++++.|+|
T Consensus       163 ~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~s  242 (394)
T d2ay1a_         163 LAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCS  242 (394)
T ss_dssp             HHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECT
T ss_pred             HhhcccCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhhhhhccccccccccc
Confidence               3456777888899999999999999999999999999999999999999987543322211  12344689999999


Q ss_pred             ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhhc
Q 021547          256 KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       256 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      |.++++|+|+||++++.... .....+.+.+... .....+++.+.|+++..++.+
T Consensus       243 k~~~~~G~R~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (394)
T d2ay1a_         243 KNFGIYRERTGCLLALCADA-ATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTT  297 (394)
T ss_dssp             TTTTCGGGCEEEEEEECSSH-HHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHS
T ss_pred             ccccCCcccccchhhchhHH-HHHHHhhhhhHhhhcccccchhHHHHHHHHHhcCC
Confidence            99999999999999976421 1011112222222 334567788888888777654

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=2.8e-34  Score=258.23  Aligned_cols=241  Identities=19%  Similarity=0.315  Sum_probs=197.5

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      .+.++|||+.|.+.    +++|+.+++++.+....  ...|++ .+..+||+++++++      ++++++|++|+|++++
T Consensus        20 ~p~~~idls~~~np----~~~p~~~~~a~~~~~~~--~~~Yp~-~~~~~Lr~aia~~~------~v~~~~I~~~~g~~~~   86 (355)
T d1lc5a_          20 SPDQLLDFSANINP----LGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETES   86 (355)
T ss_dssp             CGGGSEECSSCCCT----TCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHH
T ss_pred             ChhheEEccCCCCC----CCCCHHHHHHHHHHHHH--hccCCC-CChHHHHHHHHHHh------CCCHHHEEecccHHHH
Confidence            35679999999532    56789999999887653  446844 57799999999999      4688999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCC
Q 021547          123 VEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       123 ~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~  202 (311)
                      +..++.++.  + +.+++..|.|..|.......+.+++.+++..++++.++ +.+.+.+.++++++++++|+||||.+++
T Consensus        87 ~~~~~~~~~--~-~~~~v~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~v~l~nP~NPtG~~~~  162 (355)
T d1lc5a_          87 IFTVASGLK--P-RRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPE  162 (355)
T ss_dssp             HHHHHHHHC--C-SEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCC-TTHHHHCCTTCCEEEEESSCTTTCCCCC
T ss_pred             HHHHHhhhc--c-ccccccCCccceeccccccccccceeeeeeccCCccce-eeeeeccccccceeeeecccCcccccch
Confidence            998877764  4 45667789999999999999999999998777777666 4566677889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhH
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGI  282 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  282 (311)
                      .+++++|+++|++|++++|+||+|..+.+.+.....+  ....+++|++.|+||.|++||+|+||+++++.       .+
T Consensus       163 ~e~l~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~l~GlR~G~~i~~~~-------~~  233 (355)
T d1lc5a_         163 RPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPA--LKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD-------AA  233 (355)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGG--CTTCTTEEEEEESTTTTTCTTTCCEEEECCCH-------HH
T ss_pred             hhhhhhhhhhccccccccccccceeeeeeeccccccc--ccccccceeecccccccccccccccceeccch-------hh
Confidence            9999999999999999999999999987765443332  34456899999999999999999999998653       24


Q ss_pred             HHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          283 VGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      .+.++.... .+..+.++|.++..+|++
T Consensus       234 ~~~~~~~~~-~~~~~~~~~~~a~~~l~~  260 (355)
T d1lc5a_         234 MARMRRQQM-PWSVNALAALAGEVALQD  260 (355)
T ss_dssp             HHHHHHHSC-TTCSCHHHHHHHHHGGGC
T ss_pred             hHHHHhhcC-Cccccccccccccccccc
Confidence            455554443 567899999999998875

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.1e-32  Score=245.87  Aligned_cols=232  Identities=17%  Similarity=0.205  Sum_probs=186.5

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      ..++++|+|+.|.+.    +++|+.+.+++.+.+..... +|.+..|.++||++++++++.+   .+++++|++|+|+++
T Consensus        16 ~~~~d~~~l~~~enp----~~~p~~i~~~~~~~~~~~~~-~~yp~~g~~~Lr~aia~~~~~~---~v~~d~I~it~G~~~   87 (334)
T d2f8ja1          16 TEKRDKTYLALNENP----FPFPEDLVDEVFRRLNSDAL-RIYYDSPDEELIEKILSYLDTD---FLSKNNVSVGNGADE   87 (334)
T ss_dssp             CCCCCSEECSSCCCS----SCCCHHHHHHHHHHCCTTGG-GSCCCSSCHHHHHHHHHHHTCS---SCCGGGEEEEEHHHH
T ss_pred             ccCCCceEEECCCCC----CCCCHHHHHHHHHHhhcchh-cCCCCCCcHHHHHHHHHHhccc---CCCcceEEecCcchh
Confidence            357899999999643    67889999999988876655 4556679999999999999764   367899999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547          122 AVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~  201 (311)
                      ++.+++.    +| |+|+++.|+|..|...++..|++++.++++.+..  .+     +...++++++++++|+||||.++
T Consensus        88 ~l~~l~~----~~-d~v~i~~P~y~~~~~~~~~~g~~~v~v~~~~~~~--~~-----~~~~~~~~~l~l~nP~NPtG~~~  155 (334)
T d2f8ja1          88 IIYVMML----MF-DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLR--IP-----EVNVGEGDVVFIPNPNNPTGHVF  155 (334)
T ss_dssp             HHHHHHH----HS-SEEEECSSCCHHHHHHHHHHTCCEEECCCCTTSC--CC-----CCCCCTTEEEEEESSCTTTCCCC
T ss_pred             HHHHHhh----hc-cccccccccccccccchhccCCcccccccccccc--cc-----ccccccceEEEecccccccceee
Confidence            8887654    57 9999999999999999999999999998764322  11     23456789999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      +.+++.++    .++++++|+||+|..+.+.....    .....+++|+++|+||.|+++|+|+||++++.        +
T Consensus       156 s~~~l~~~----~~~~~~ii~Dd~~~~~~~~~~~~----~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~--------~  219 (334)
T d2f8ja1         156 EREEIERI----LKTGAFVALDEAYYEFHGESYVD----FLKKYENLAVIRTFSKAFSLAAQRVGYVVASE--------K  219 (334)
T ss_dssp             CHHHHHHH----HTTTCEEEEECTTGGGTCCCCGG----GGGTCSSEEEEEESTTTSSCTTTCEEEEEECH--------H
T ss_pred             cHHHhhcc----ccceeEEeecccchhhccccccc----ccccCceEEEEecCccccchhhhhhhhcccch--------H
Confidence            97766553    46799999999998765432211    22345689999999999999999999999853        4


Q ss_pred             HHHHHhhhhccccCCCchhHHHHHhhhhc
Q 021547          282 IVGSIKACLGVRSGPSTLIQVCEMFLLVN  310 (311)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  310 (311)
                      ++.++..... ..++|.++|.++..++++
T Consensus       220 ~i~~l~~~~~-~~~~s~~~~~~a~~~l~~  247 (334)
T d2f8ja1         220 FIDAYNRVRL-PFNVSYVSQMFAKVALDH  247 (334)
T ss_dssp             HHHHHHHHSC-TTCSCHHHHHHHHHHHHT
T ss_pred             HHHHHHHhhc-ccccchhhhhhccccccc
Confidence            8888887765 457899999988887754

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=1.9e-31  Score=239.53  Aligned_cols=231  Identities=19%  Similarity=0.304  Sum_probs=184.8

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEA  122 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a  122 (311)
                      +++..|.++.+...    +++++.+        .....++|+++ +..+||+++++++      ++++++|++|+|++++
T Consensus        25 ~~~~~i~L~~ne~p----~~~~~~~--------~~~~l~rYPd~-~~~~Lr~~ia~~~------gv~pe~I~it~Gs~ea   85 (354)
T d1fg7a_          25 GGNGDVWLNANEYP----TAVEFQL--------TQQTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEG   85 (354)
T ss_dssp             TTTCSEECSSCCCS----SCCCCCC--------CCCCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHH
T ss_pred             CCCCCEEeeCCCCC----CCCCHHH--------HHHHHhcCCCC-cHHHHHHHHHHHh------CCChHHeeeccCchHH
Confidence            45778999988532    2233222        22245578654 6689999999999      4689999999999999


Q ss_pred             HHHHHHHHhcCCCC-EEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCC
Q 021547          123 VEIILTVITRLGAA-NILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVL  201 (311)
Q Consensus       123 ~~~~~~~l~~~g~d-~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~  201 (311)
                      +..++++++++| | .|+++.|+|..|...++..|.+++.++..  +++.+|++.++..+. +++++++++||||||.++
T Consensus        86 i~~~~~~~~~pg-d~~Vl~~~P~y~~~~~~~~~~g~~v~~~~~~--~~~~~d~~~l~~~~~-~~~~v~~~~pnNPtG~~~  161 (354)
T d1fg7a_          86 IELLIRAFCEPG-KDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLI  161 (354)
T ss_dssp             HHHHHHHHCCTT-TCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCC
T ss_pred             HHHHHHHhhccc-cccccccccccccchhhhhccCceeeccccc--cccccchhhhhhccc-ccceeeccCCCccceeEe
Confidence            999999999999 7 68899999999999999999999988754  578999999988764 789999999999999999


Q ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhh
Q 021547          202 TYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSG  281 (311)
Q Consensus       202 ~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  281 (311)
                      +.++++.+...++ ++.++|+||+|..+.++....   .......++++++||||.|+++|+|+||++++.        +
T Consensus       162 ~~~~~~~~~~~~~-~~~~~iidd~~~~f~~~~~~~---~~~~~~~~~iv~~S~SK~~~laGlRiGy~i~~~--------~  229 (354)
T d1fg7a_         162 NPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLA---GWLAEYPHLAILRTLSKAFALAGLRCGFTLANE--------E  229 (354)
T ss_dssp             CHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSG---GGTTTCTTEEEEEESSSTTCCGGGCCEEEEECH--------H
T ss_pred             eeccccccccccc-ccccccccccchhhccccccc---hhhcccccceEEeCCccccCCCccccccccccc--------h
Confidence            9999998887776 578899999998876543221   123456689999999999999999999999853        4


Q ss_pred             HHHHHhhhhccccCCCchhHHHHHhhhh
Q 021547          282 IVGSIKACLGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +++.+..... .++++.++|.+++.++.
T Consensus       230 ~i~~l~~~~~-~~~~~~~~~~~a~~~~~  256 (354)
T d1fg7a_         230 VINLLMKVIA-PYPLSTPVADIAAQALS  256 (354)
T ss_dssp             HHHHHHHHSC-SSCSCHHHHHHHHHHTS
T ss_pred             hhhhhhhhcC-ccchhhHHHHHHHHHHh
Confidence            7888877765 34667777777666554

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.95  E-value=1.2e-28  Score=225.12  Aligned_cols=229  Identities=15%  Similarity=0.116  Sum_probs=173.0

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHH--hcCCCCCCCCCCC----cHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSV--RSSMFNCYAPMFG----LPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~--~~~~~~~Y~~~~g----~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      ++-++|+++|+|.++..    =..+.+-..+.  ...+.++|....+    .++|++.|+++.....+..++..+|++++
T Consensus        55 ~~~~~~~~~gdp~~~~~----~w~~~~~~~~~~~~~~~~~sy~~~~~~~~~~~~L~~~i~~lh~~~gna~t~~~~IvvG~  130 (425)
T d2hoxa1          55 QGCSADVASGDGLFLEE----YWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGV  130 (425)
T ss_dssp             TTCCEECCSCCCGGGHH----HHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEES
T ss_pred             CCceeeCCCCCCCCCCH----HHHhCcccceEEeecccccceecCCccccCCHHHHHHHHHHHhhhCCCCCCCCEEEECC
Confidence            56789999999875421    11222212221  1212334543322    38999999999987766666777899999


Q ss_pred             ChHHHHHHHHHHH--------hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEE
Q 021547          118 GCMEAVEIILTVI--------TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIV  189 (311)
Q Consensus       118 g~~~a~~~~~~~l--------~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~  189 (311)
                      |+++++++++.+|        ..|| |+|+++.|+|+.|...++..+.+...        |.+|.+.+++.+++++++++
T Consensus       131 Gsteli~~~~~AL~~~~~~~~~~pg-~~Vv~~~P~y~~Y~~~~~~~~~~~~~--------~~~D~~~~~~~~~~~~~ii~  201 (425)
T d2hoxa1         131 GVTQLIHGLVISLSPNMTATPDAPE-SKVVAHAPFYPVFREQTKYFDKKGYV--------WAGNAANYVNVSNPEQYIEM  201 (425)
T ss_dssp             HHHHHHHHHHHHHSCCTTTCTTSCC-EEEEECSSCCHHHHHHHHHSCBTTEE--------EEEEGGGGTTCSCGGGEEEE
T ss_pred             CHHHHHHHHHHHhccccccccCCCC-CEEEEecCccccHHHHHHHcCCCCCc--------cCCCHHHHHhhCCCCceEEE
Confidence            9999999999999        4688 99999999999999999988865544        44578888888888999999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          190 IINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       190 i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      +++||||||.+..          +..+++.+|.||+|....|.     ++..  ..+++|++.|+||.|+++|+|+||++
T Consensus       202 l~sPnNPtG~l~~----------~v~~~~~~I~DEaY~~~~f~-----~~~~--~~~~~Ivl~S~SK~fglaGlRiGw~i  264 (425)
T d2hoxa1         202 VTSPNNPEGLLRH----------AVIKGCKSIYDMVYYWPHYT-----PIKY--KADEDILLFTMSKFTGHSGSRFGWAL  264 (425)
T ss_dssp             EESSCTTTCCCCC----------CSSTTCEEEEECTTCSTTTS-----CCCS--CBCCSEEEEEHHHHTSCGGGCCEEEE
T ss_pred             EECCCCCCcchhh----------hhhhCCEEEEeccccCcccc-----chhh--hcCCeEEEEeCHHhccCcchheeeEE
Confidence            9999999998742          22358999999999764432     2222  24478999999999999999999998


Q ss_pred             eeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          270 TNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      ++++       .+.+++..+.. ...++|.++|.++.++|+
T Consensus       265 ~~~~-------~i~~~~~~~~~~~~~~vs~~~Q~aa~~aL~  298 (425)
T d2hoxa1         265 IKDE-------SVYNNLLNYMTKNTEGTPRETQLRSLKVLK  298 (425)
T ss_dssp             ECCH-------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHH
T ss_pred             eCCH-------HHHHHHHHhhccCcccCCHHHHHHHHHHhh
Confidence            8764       37777777644 357899999999988875

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.91  E-value=1.9e-24  Score=193.48  Aligned_cols=190  Identities=14%  Similarity=0.166  Sum_probs=147.0

Q ss_pred             CcHHHHHHHHHHHhcCCCCCC---------CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcC
Q 021547           63 TAAVAEDAIVDSVRSSMFNCY---------APMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRL  133 (311)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~~Y---------~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~  133 (311)
                      .++++++++.+.........|         ..++-...+++.+|+++        ..+++++|+|+++|+.+++.+++++
T Consensus        14 l~~~a~~a~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~--------g~e~~~~t~g~t~a~~~~~~al~~~   85 (364)
T d2e7ja1          14 LTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL--------GCDVARVTNGAREAKFAVMHSLAKK   85 (364)
T ss_dssp             CCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT--------TSSEEEEESSHHHHHHHHHHHHCCT
T ss_pred             CCHHHHHHHHHHhcCCchhccccccccccccChHHHHHHHHHHHHHh--------CcCEEEEECcHHHHHHHHHHHHhCC
Confidence            467888887754321100011         11122355788888887        3478999999999999999999999


Q ss_pred             CCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC-----CccEEEEeCCCCCCccCCCHHHHHH
Q 021547          134 GAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE-----NTAAIVIINPCNPCGNVLTYQHLQK  208 (311)
Q Consensus       134 g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~i~i~~p~nptG~~~~~~~l~~  208 (311)
                      | |+|+++.++|.+....++..|.+++.+|.....++.+|++.+++.+++     +++++++++|+||||.+.+   +++
T Consensus        86 g-d~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~---l~~  161 (364)
T d2e7ja1          86 D-AWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD---VKK  161 (364)
T ss_dssp             T-CEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC---HHH
T ss_pred             C-cEEEeecccccccchHHHhccceEEEeeeccccccccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeec---chh
Confidence            9 999999999998888899999999999987767788999999998754     3457889999999999999   899


Q ss_pred             HHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          209 IAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       209 l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                      |+++|++||+++++|++|+...+    ...+..+.   ..+++.|+||+++.+| ++||+++++
T Consensus       162 I~~ia~~~~i~livD~a~~~g~~----~~~~~~~g---~D~~~~S~~K~~~~~g-~~g~l~~~~  217 (364)
T d2e7ja1         162 IAKVCSEYDVPLLVNGAYAIGRM----PVSLKEIG---ADFIVGSGHKSMAASG-PIGVMGMKE  217 (364)
T ss_dssp             HHHHHHTTTCCEEEECTTTBTTB----CCCHHHHT---CSEEEEEHHHHSSCCS-SCEEEEECT
T ss_pred             heeccccccchhhccccchhhhh----hhcccccc---cceeeeccccccCCCC-CEEEEEECH
Confidence            99999999999999999975322    12222222   2388999999998877 799998865

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.91  E-value=3.3e-24  Score=192.76  Aligned_cols=234  Identities=15%  Similarity=0.047  Sum_probs=171.6

Q ss_pred             hHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCC
Q 021547           27 AFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY  106 (311)
Q Consensus        27 ~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~  106 (311)
                      .++++++.       ...+.++++.....    .++..+...+.+..        .+.+..+.+++++..++.+..    
T Consensus         9 ~~~~~i~~-------~g~~~i~~~~gl~~----~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~----   65 (366)
T d2aeua1           9 IILEILNE-------KGRDALYDLSGLSG----GFLIDEKDKALLNT--------YIGSSYFAEKVNEYGLKHLGG----   65 (366)
T ss_dssp             HHHHHHHH-------TCGGGCEECSSCCC----CCCCCHHHHHHHTS--------TTHHHHHHHHHHHHHHHHHTC----
T ss_pred             HHHHHhch-------hccchHhhhccCCC----CCCccHHHHHHHHH--------hcCchhhHHHHHHHHHHHccC----
Confidence            36666653       13456788876543    24555655554421        123334567888888888853    


Q ss_pred             CCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEec-CCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCc
Q 021547          107 KLSADDIYITLGCMEAVEIILTVITRLGAANILLP-RPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENT  185 (311)
Q Consensus       107 ~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~-~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~  185 (311)
                       ...+++++|+|+++|+..++.+|...+ +.|+++ .|+|..+...++..|.+++.  ..       |+++|++.+++++
T Consensus        66 -~~~e~~~~~~~~~~a~~~~l~al~~~~-~vi~~~~~~~~~~~~~~~~l~g~~~v~--~~-------d~e~l~~~i~~~t  134 (366)
T d2aeua1          66 -DENDKCVGFNRTSSAILATILALKPKK-VIHYLPELPGHPSIERSCKIVNAKYFE--SD-------KVGEILNKIDKDT  134 (366)
T ss_dssp             -CTTEEEEEESSHHHHHHHHHHHHCCSE-EEEECSSSSCCTHHHHHHHHTTCEEEE--ES-------CHHHHHTTCCTTE
T ss_pred             -CCccEEEEeCCHHHHHHHHHHHhCCCC-EEEEecCCCcchhHHHHHHhcCCeEEC--CC-------CHHHHHHhcCCCc
Confidence             255789999999999999999986544 444554 68999999999999987643  21       8999999999999


Q ss_pred             cEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCccee
Q 021547          186 AAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRF  265 (311)
Q Consensus       186 ~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~  265 (311)
                      +++++.+|+||+  .++.+++++|+++|++||+++++|++|+...|............   ..++++|+||.  ++|+|+
T Consensus       135 k~i~~~~p~n~~--~~~~~~l~~i~~ia~~~~~~~i~De~y~~~~~~~~~~~~~~~~~---~di~~~S~sK~--~~g~~~  207 (366)
T d2aeua1         135 LVIITGSTMDLK--VIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLG---ADLVVTSTDKL--MEGPRG  207 (366)
T ss_dssp             EEEEECBCTTSC--BCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHT---CSEEEEETTSS--SSSCSC
T ss_pred             eEEEEEecCCCC--cCCHHHHHHHHHHhccCcEEEEEecCccccccccccCCCHhhcC---ceEEEeccccc--ccccce
Confidence            999999999985  46778999999999999999999999997666422222221222   23889999997  468999


Q ss_pred             eEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhh
Q 021547          266 GWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       266 G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~  309 (311)
                      ||++++.        ++++.++... ....+++++.|+++.+.|+
T Consensus       208 G~i~~~~--------~~i~~~~~~~~~~g~~~~~~~~~a~~~aL~  244 (366)
T d2aeua1         208 GLLAGKK--------ELVDKIYIEGTKFGLEAQPPLLAGIYRALK  244 (366)
T ss_dssp             EEEEEEH--------HHHHHHHHHHHTTTCBCCHHHHHHHHHHHH
T ss_pred             eEEEecH--------HHHHHHHHHHhcccccCCHHHHHHHHHHHH
Confidence            9999864        4888888774 4567788999998877654

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=4.5e-21  Score=173.45  Aligned_cols=197  Identities=18%  Similarity=0.175  Sum_probs=153.6

Q ss_pred             eecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-C-C----------cHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 021547           48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPM-F-G----------LPLARRAVAEYLNRDLPYKLSADDIYI  115 (311)
Q Consensus        48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~-~-g----------~~~lr~~ia~~l~~~~g~~~~~~~v~~  115 (311)
                      |.|+++.     ..|.++.++++|.+.+....  .|..+ . .          +.++|+.++++++      +++++|++
T Consensus         4 iYlD~aa-----~~p~~~~v~ea~~~~~~~~~--~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg------~~~~~I~~   70 (391)
T d1p3wa_           4 IYLDYSA-----TTPVDPRVAEKMMQFMTMDG--TFGNPASRSHRFGWQAEEAVDIARNQIADLVG------ADPREIVF   70 (391)
T ss_dssp             EECBTTT-----CCCCCHHHHHHHHTTTSTTS--CCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHT------CCGGGEEE
T ss_pred             EEeeCcc-----ccCCCHHHHHHHHHHHHhcc--ccCCCchhhhHHHHHHHHHHHHHHHHHHHHcC------CCCCcEEE
Confidence            4666664     35789999999998876432  23321 1 1          3467888999984      57899999


Q ss_pred             eCChHHHHHHHHHHHh----cCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEE
Q 021547          116 TLGCMEAVEIILTVIT----RLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAI  188 (311)
Q Consensus       116 t~g~~~a~~~~~~~l~----~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i  188 (311)
                      |+|+|+++..++.++.    ++| |+|++..+.|+.+..   .++..|.+++.++.+  ..+.+|++.++++++++|+++
T Consensus        71 ~~~~t~~l~~~~~~~~~~~~~~g-d~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~~~~~i~~~T~lv  147 (391)
T d1p3wa_          71 TSGATESDNLAIKGAANFYQKKG-KHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQ--RNGIIDLKELEAAMRDDTILV  147 (391)
T ss_dssp             ESSHHHHHHHHHHHHHHHHGGGC-CEEEEETTSCHHHHHHHHHHHHTTCEEEEECCC--TTSCCCHHHHHHHCCTTEEEE
T ss_pred             ECCHHHHHHHHHhhhhhhhcCCC-CEEEEeccccchHHHHHHHHHHcCCEEEEeCCC--CCCeEcHHHHHHhCCCCcEEE
Confidence            9999999998887764    689 999999999998654   345679999999865  445689999999999999999


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547          189 VIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL  268 (311)
Q Consensus       189 ~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i  268 (311)
                      ++++++||||.++|   +++|+++|+++|+++++|.+|....    .+..+..++   ..+++.|.+|.+|.+|.  |++
T Consensus       148 ~is~~~n~tG~~~~---~~~I~~~~~~~~~~~ivD~~~~~g~----~~~d~~~~~---~D~~~~s~~k~~g~~g~--g~~  215 (391)
T d1p3wa_         148 SIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGK----LPIDLSQLK---VDLMSFSGHKIYGPKGI--GAL  215 (391)
T ss_dssp             ECCSBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTBTT----BCCCTTTSC---CSEEEEESTTTTSCSSC--EEE
T ss_pred             EEECCCCCCeeECC---HHHHHHHhccCCcEEEEeeccccCC----ccccchhcc---ccccccccccccCCCce--EEE
Confidence            99999999999999   8899999999999999999998632    222333332   23888899999877774  665


Q ss_pred             EeeC
Q 021547          269 ATND  272 (311)
Q Consensus       269 ~~~~  272 (311)
                      .+..
T Consensus       216 ~~~~  219 (391)
T d1p3wa_         216 YVRR  219 (391)
T ss_dssp             EECB
T ss_pred             EEec
Confidence            5544

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=7.3e-21  Score=171.55  Aligned_cols=213  Identities=12%  Similarity=0.110  Sum_probs=165.8

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF------NCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      +++++++|+..+   |.++..+|.++++..++++....      ..+....-+.+|++.+++|+        ..+..+++
T Consensus        36 ~g~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g~~~~~~~lE~~LA~~~--------g~e~al~~  104 (383)
T d1bs0a_          36 DDRQYLNFSSND---YLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL--------GYSRALLF  104 (383)
T ss_dssp             TTEEEEECSCCC---TTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH--------TCSEEEEE
T ss_pred             CCeEEEEEEccc---ccccCCCHHHHHHHHHHHHHhCCCCCccccccCcchHHHHHHHHHHHhc--------CCCceEEe
Confidence            366889999998   45777899999999999874211      11223334588999999999        45788999


Q ss_pred             CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC---CCccEEEEeCC
Q 021547          117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD---ENTAAIVIINP  193 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p  193 (311)
                      +++..+...++.++..++ |.|++....|..+...++..+.+++.++..       |.+++++.+.   ++.+++++..+
T Consensus       105 ~SG~~an~~~i~al~~~~-d~v~~d~~~h~si~~g~~~~~~~~~~~~hn-------d~~~le~~l~~~~~~~~~vv~e~v  176 (383)
T d1bs0a_         105 ISGFAANQAVIAAMMAKE-DRIAADRLSHASLLEAASLSPSQLRRFAHN-------DVTHLARLLASPCPGQQMVVTEGV  176 (383)
T ss_dssp             SCHHHHHHHHHHHHCCTT-CEEEEETTCCHHHHHHHHTSSSEEEEECTT-------CHHHHHHHHHSCCSSCEEEEEESB
T ss_pred             cccchhhHHHHHhhcCCC-ceEEeeccccHHHhhccccCCCcceEecch-------HHHHHHHHhcccCCCceEEEecCC
Confidence            999999999999999999 999999999999999999999998887642       7777777653   45677788888


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          194 CNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       194 ~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      .+.+|.+.|   +++|.++|++||+++++||+|+...++.........+. ..+.+.+.+++|.+|.+|   |++.+.. 
T Consensus       177 ~s~~G~i~p---l~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~-~~~~~~~~t~~ka~g~~G---g~v~~~~-  248 (383)
T d1bs0a_         177 FSMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQK-VKPELLVVTFGKGFGVSG---AAVLCSS-  248 (383)
T ss_dssp             CTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTT-CCCSEEEEESSSTTSSCC---EEEEECH-
T ss_pred             CCCCCcccc---hhHHHHHHHhcCcEEEeecceeeeecCCcccchHHHcC-Cccccccccccccccccc---cccccch-
Confidence            999999999   88899999999999999999998776532222122222 234477889999999988   8888754 


Q ss_pred             CCccchhhHHHHHhhh
Q 021547          274 NGVLQKSGIVGSIKAC  289 (311)
Q Consensus       274 ~~~~~~~~~~~~~~~~  289 (311)
                             ++++.++..
T Consensus       249 -------~~~~~l~~~  257 (383)
T d1bs0a_         249 -------TVADYLLQF  257 (383)
T ss_dssp             -------HHHHHHHHH
T ss_pred             -------hHHHHHHhh
Confidence                   356666544

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.81  E-value=3.2e-19  Score=160.44  Aligned_cols=204  Identities=19%  Similarity=0.116  Sum_probs=148.1

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhc---CCCCCCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCC
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRS---SMFNCYAPMF----GLPLARRAVAEYLNRDLPYKLSADDIYITLG  118 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~---~~~~~Y~~~~----g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g  118 (311)
                      ..+.|+++..     .+.|..+.++|.+.+..   .....+....    -+.++|+.++++++      +++++|++|+|
T Consensus         7 ~~~yld~~~~-----~~~p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~i~~~~g   75 (381)
T d1elua_           7 NKTYFNFGGQ-----GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFN------VDPNTITITDN   75 (381)
T ss_dssp             TSEECCTTTC-----CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTT------SCGGGEEEESS
T ss_pred             CCEEeeCCcc-----cCCCHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHHHHHHHHHhC------CCcccEEEECC
Confidence            3467887763     35677788888877642   1111222211    13457777787773      47789999999


Q ss_pred             hHHHHHHHHHHH-hcCCCCEEEecCCCCcch----HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC
Q 021547          119 CMEAVEIILTVI-TRLGAANILLPRPGWPFY----ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP  193 (311)
Q Consensus       119 ~~~a~~~~~~~l-~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p  193 (311)
                      +|++++.++.++ .++| |+|+++.+.|++.    ....+..|+++..++...........+.+++.+++++++++++++
T Consensus        76 ~t~a~~~~~~~l~~~~g-~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~~~t~~v~i~~~  154 (381)
T d1elua_          76 VTTGCDIVLWGLDWHQG-DEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHL  154 (381)
T ss_dssp             HHHHHHHHHHHSCCCTT-CEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESB
T ss_pred             hHHHhhhcchhhhhcCC-ceEEEeccccceeeeccccccccccccccccccccccccchHHHHHHhhhcccccccccccc
Confidence            999999999998 4788 9999999999754    345666899999998754433333467788889999999999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHh----CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          194 CNPCGNVLTYQHLQKIAETARKL----GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       194 ~nptG~~~~~~~l~~l~~l~~~~----~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      +|+||..+|   +++|.++|+++    ++++++|.+|+..    ..+..+..+.   ..+++.|++|+++.| .++|++.
T Consensus       155 ~n~tG~~~~---~~~I~~l~~~~~~~~~~~~~vD~~~~~g----~~~~~~~~~~---~D~~~~s~~K~~~~p-~G~g~l~  223 (381)
T d1elua_         155 LWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAG----SLPLDFSRLE---VDYYAFTGHKWFAGP-AGVGGLY  223 (381)
T ss_dssp             CTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBT----TBCCCTTTSC---CSEEEEESSSTTCCC-TTCEEEE
T ss_pred             cccccccch---hhHHHHHHhhcccccccccccccccccc----cccccccccc---ccccccccccccccc-chhhHHH
Confidence            999999999   77888888874    6999999999852    2223333332   348999999997654 4567777


Q ss_pred             eeC
Q 021547          270 TND  272 (311)
Q Consensus       270 ~~~  272 (311)
                      +..
T Consensus       224 ~~~  226 (381)
T d1elua_         224 IHG  226 (381)
T ss_dssp             ECT
T ss_pred             hhH
Confidence            643

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=2e-18  Score=156.69  Aligned_cols=217  Identities=19%  Similarity=0.198  Sum_probs=162.1

Q ss_pred             hHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC-CC-C------CCcHHHHHHHHH
Q 021547           27 AFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCY-AP-M------FGLPLARRAVAE   98 (311)
Q Consensus        27 ~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y-~~-~------~g~~~lr~~ia~   98 (311)
                      .+|+.+..+.+.   ..+.+++.|+++.     ..+.|+.+.+++.+.+.....+.. +. .      .-+.+.|+.+++
T Consensus         6 ~vR~~FP~l~~~---~~~~~~iYld~a~-----~~~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~   77 (405)
T d1jf9a_           6 KVRADFPVLSRE---VNGLPLAYLDSAA-----SAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASL   77 (405)
T ss_dssp             HHHHTCGGGGCE---ETTEECEECCTTT-----CCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhChhcccC---cCCCCeEEEeCcc-----ccCCCHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHH
Confidence            355555443221   1356778998886     347789999999988764321111 10 0      124567788888


Q ss_pred             HHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH----hcCCCCEEEecCCCCcch----HHHHHHcCcEEEEeeccCCCCc
Q 021547           99 YLNRDLPYKLSADDIYITLGCMEAVEIILTVI----TRLGAANILLPRPGWPFY----ESFAKRNHIEVRHFDLLPERGW  170 (311)
Q Consensus        99 ~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l----~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~  170 (311)
                      +++.     ..+++|++++|+|+++..++.++    ..+| |.|++....|++.    ...++..|++++.+|++.  ++
T Consensus        78 ~l~~-----~~~~~i~~~~~~T~~~~~~~~~~~~~~~~~g-~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~--~g  149 (405)
T d1jf9a_          78 FINA-----RSAEELVFVRGTTEGINLVANSWGNSNVRAG-DNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DG  149 (405)
T ss_dssp             HTTC-----SCGGGEEEESSHHHHHHHHHHHHHHHHCCTT-CEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TS
T ss_pred             HcCC-----CCcccccccCcHHHHHHHHHhcccccccCCC-CEEEEEeCcccchHHHHHHHHHHcCcEEEEECCCC--CC
Confidence            8852     24579999999999999888764    3688 9999999999863    456678899999998753  45


Q ss_pred             ccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547          171 EVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT  250 (311)
Q Consensus       171 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  250 (311)
                      .++++.++++++++++++.+++.+|.||..+|   +++|+++|+++|+++++|.+++.    |.-+..+..+..+   ++
T Consensus       150 ~~~~~~~~~~i~~~t~lv~~~~v~~~tG~~~p---i~~i~~~~~~~g~~~~vD~~q~~----g~~~id~~~~~~D---~~  219 (405)
T d1jf9a_         150 TLQLETLPTLFDEKTRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAV----MHHPVDVQALDCD---FY  219 (405)
T ss_dssp             CBCGGGHHHHCCTTEEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHHTCS---EE
T ss_pred             cCCHHHHHHhccCCcEEEEEecCCCcccccCc---hHHhhhHHHHcCCeeecccceec----cccccchhhcCCc---ee
Confidence            78999999999999999999999999999999   99999999999999999999986    2222333333333   99


Q ss_pred             EecCcccCCCCcceeeEEEee
Q 021547          251 LGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      +.|++|++|.+|  +|++.+.
T Consensus       220 ~~s~hK~~Gp~G--~g~l~v~  238 (405)
T d1jf9a_         220 VFSGHKLYGPTG--IGILYVK  238 (405)
T ss_dssp             EEEGGGTTSCSS--CEEEEEC
T ss_pred             eccccccccCCC--ceeeeec
Confidence            999999987666  5666664

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.79  E-value=2.6e-18  Score=154.52  Aligned_cols=213  Identities=16%  Similarity=0.127  Sum_probs=160.5

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeC
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN------CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITL  117 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~  117 (311)
                      ++++++|+.++   |.++..+|.++++..+.++.....      -++...-+.+|++.+|+|+        ..+..++.+
T Consensus        44 ~~~~~~FsSnd---YLGL~~~p~v~~a~~~al~~yG~gs~~Sr~~~G~~~~h~~LE~~lA~~~--------g~e~all~~  112 (396)
T d2bwna1          44 KQDITVWCGND---YLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH--------QKEAALVFS  112 (396)
T ss_dssp             EEEEEECSCSC---TTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT--------TCSEEEEES
T ss_pred             CeEEEEEEccc---ccCcCCCHHHHHHHHHHHHHhCCCccccccccCCchHHHHHHHHHHHHh--------CCCceeeee
Confidence            46789999999   568889999999999998742111      1222223468888999998        457788888


Q ss_pred             ChHHHHHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc---CC-CccEEEEe
Q 021547          118 GCMEAVEIILTVIT--RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA---DE-NTAAIVII  191 (311)
Q Consensus       118 g~~~a~~~~~~~l~--~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l---~~-~~~~i~i~  191 (311)
                      ++..|...++.+|.  .++ |.|+.+.-.|......++..+.+++.++..       |.+++++.+   ++ +.+.|++.
T Consensus       113 sG~~An~~~i~~l~~~~~~-d~i~~D~~~Hasi~~g~~ls~a~~~~f~Hn-------d~~~l~~l~~~~~~~~~~~iv~e  184 (396)
T d2bwna1         113 SAYNANDATLSTLRVLFPG-LIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFE  184 (396)
T ss_dssp             CHHHHHHHHHHHHHHHSTT-CEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEE
T ss_pred             cchHHHHHHHHHHhcccCC-CceeehhhhhhccchhhhccccCceEeecc-------hHHHhhhHHhhhcccCceeEEEE
Confidence            89999999999884  588 999999999999999999999998887642       555555443   33 44566666


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC-CCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          192 NPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG-SIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       192 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      ...+.+|.+.|   +++|+++|++||.++++||+|+..+++.........+. .....|+++||+|+||..|   |++.+
T Consensus       185 gvySmdGd~ap---l~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di~~gTlsKa~g~~G---g~v~~  258 (396)
T d2bwna1         185 SVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAA  258 (396)
T ss_dssp             SBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEE
T ss_pred             eeccCcccccc---cHhHHHHhhhhcceeeeccceeeeeeccccccchhhcCCceeeeeeeecccccccccc---cccch
Confidence            77899999999   99999999999999999999998777532222222221 1224599999999999999   99876


Q ss_pred             eCCCCccchhhHHHHHhhh
Q 021547          271 NDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~  289 (311)
                      +.        ++++.++..
T Consensus       259 ~~--------~~i~~l~~~  269 (396)
T d2bwna1         259 SA--------RMVDAVRSY  269 (396)
T ss_dssp             CH--------HHHHHHHHH
T ss_pred             hH--------HHHHHHHhh
Confidence            43        366777655

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.79  E-value=1.1e-17  Score=150.05  Aligned_cols=197  Identities=18%  Similarity=0.159  Sum_probs=147.2

Q ss_pred             eecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP-------MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~-------~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      |.|+.+.     ..++|+.+.+++.+.+.....+....       ...+.+.|+.+++++      ++++++|++++|+|
T Consensus         3 iyld~a~-----~~~~p~~v~ea~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~------~~~~~~i~~~~~~T   71 (376)
T d1eg5a_           3 VYFDNNA-----TTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCAT   71 (376)
T ss_dssp             EECBTTT-----CCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHH
T ss_pred             EEEECcc-----cccCCHHHHHHHHHHHHHcCCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCcEEEECCHH
Confidence            4565554     35678999999999887431111100       001345688899998      45788999999999


Q ss_pred             HHHHHHHHHH----hcCCCCEEEecCCCCcchHH---HHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCC
Q 021547          121 EAVEIILTVI----TRLGAANILLPRPGWPFYES---FAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINP  193 (311)
Q Consensus       121 ~a~~~~~~~l----~~~g~d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p  193 (311)
                      +++..++..+    ..+| +.|++....|+.+..   .++..|.+++.+|++  .++.+|++++++++++++++++++++
T Consensus        72 ~~l~~~~~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~id~~~l~~~i~~~t~lv~is~v  148 (376)
T d1eg5a_          72 ESINWILKTVAETFEKRK-RTIITTPIEHKAVLETMKYLSMKGFKVKYVPVD--SRGVVKLEELEKLVDEDTFLVSIMAA  148 (376)
T ss_dssp             HHHHHHHHHHHHHTTTTC-CEEEECTTSCHHHHHHHHHHHHTTCEEEECCBC--TTSCBCHHHHHHHCCTTEEEEEEESB
T ss_pred             HHHHhhhhcccccccccC-cccccccccchhhHHHHHHHHhcCCEEEEEcCC--CCCeECHHHHHHhcCCCceEEEEECC
Confidence            9999988654    3567 888888888876543   456679999999875  35679999999999999999999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHh--CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEE
Q 021547          194 CNPCGNVLTYQHLQKIAETARKL--GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWL  268 (311)
Q Consensus       194 ~nptG~~~~~~~l~~l~~l~~~~--~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i  268 (311)
                      +|+||...+   ++++.++++.+  ++++++|.+++..    .-+..+..++   ..++++|++|++|.+|.++.|+
T Consensus       149 ~~~tG~~~~---~~~i~~~~~~~~~~~~~~vD~~q~~g----~~~~d~~~~~---~D~~~~s~~K~~gp~G~~~l~~  215 (376)
T d1eg5a_         149 NNEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQTIG----KIPFSLEKLE---VDYASFSAHKFHGPKGVGITYI  215 (376)
T ss_dssp             CTTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTTTT----TSCCCCTTTC---CSEEEEEGGGGTSCTTCEEEEE
T ss_pred             ccccceeee---ehhhhhhhhhcccCceeEEEeeeccc----cccccccccC---ccceecccceeecCCCceeEEe
Confidence            999999999   66666666444  8999999999862    2223333332   3499999999999889877775

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=2.9e-18  Score=155.16  Aligned_cols=215  Identities=14%  Similarity=0.079  Sum_probs=158.2

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCY------APMFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y------~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      ++++++||+.++   |.++..+|.+++++.++++.......      ....-..++++.+++++        ..+.++++
T Consensus        43 dG~~~l~f~s~d---YLGl~~hp~v~~a~~~a~~~~g~~~~~sr~~~g~~~~~~~lE~~lA~~~--------g~e~al~~  111 (401)
T d1fc4a_          43 DGSHVINFCANN---YLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL--------GMEDAILY  111 (401)
T ss_dssp             TSCEEEECCCSC---TTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH--------TCSEEEEE
T ss_pred             CCCEEEEEEccc---cccccCCHHHHHHHHHHHHHhCCCcccceeeccCcHHHHHHHHHHHHhh--------cCCceEEe
Confidence            468899999988   45677899999999998874322111      12234568999999998        45789999


Q ss_pred             CChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcC------CCccEEEE
Q 021547          117 LGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALAD------ENTAAIVI  190 (311)
Q Consensus       117 ~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~------~~~~~i~i  190 (311)
                      ++++.|...++.++..++ |.|++....|..+...+...+.+...++..       |.+++++.++      ...+++++
T Consensus       112 ~SG~~An~~~i~~l~~~~-d~i~~d~~~h~s~~~G~~~~~a~~~~~~~~-------d~~~le~~~~~~~~~~~~~~liv~  183 (401)
T d1fc4a_         112 SSCFDANGGLFETLLGAE-DAIISDALNHASIIDGVRLCKAKRYRYANN-------DMQELEARLKEAREAGARHVLIAT  183 (401)
T ss_dssp             SCHHHHHHTTHHHHCCTT-CEEEEETTCCHHHHHHHHTSCSEEEEECTT-------CHHHHHHHHHHHHHTTCSSEEEEE
T ss_pred             cchhhhhHHHHHHhcCCC-cEEEeCCcchHHHHccccccCceEEEEcCC-------ChHHHHHHHHHhhhcccCceEEEE
Confidence            999999999999999999 999999999999999999999988877542       5555555432      23345555


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCC-CCCeEEEecCcccCCCCcceeeEEE
Q 021547          191 INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGS-IVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       191 ~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      ....+..|...+   ++++.++|++||+++|+||+|+...++.........+.. ....+++.|++|.++.  ...|++.
T Consensus       184 egv~s~~G~~~~---L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~gg--~~Gg~v~  258 (401)
T d1fc4a_         184 DGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGG--ASGGYTA  258 (401)
T ss_dssp             ESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCS--SSCEEEE
T ss_pred             cCCCCCCCchhh---hhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeeccccccc--CCccccc
Confidence            666777888888   999999999999999999999987775322222111211 2235889999999743  3337777


Q ss_pred             eeCCCCccchhhHHHHHhhh
Q 021547          270 TNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~  289 (311)
                      ++.        ++++.++..
T Consensus       259 g~~--------~~~~~l~~~  270 (401)
T d1fc4a_         259 ARK--------EVVEWLRQR  270 (401)
T ss_dssp             ECH--------HHHHHHHHH
T ss_pred             CCH--------HHHHHHHcC
Confidence            643        467766644

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.76  E-value=1.5e-17  Score=148.36  Aligned_cols=188  Identities=22%  Similarity=0.218  Sum_probs=146.0

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHH----HHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFA----KRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~  163 (311)
                      ....|++.+++..        ..+..+++++|+.|+..++.+++++| |+|+++...|.+....+    +..|+++..++
T Consensus        60 T~~~LE~~la~LE--------g~~~a~~~~SGmaAi~~~l~~l~~~G-d~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d  130 (392)
T d1gc0a_          60 TLNLLEARMASLE--------GGEAGLALASGMGAITSTLWTLLRPG-DEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVD  130 (392)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTT-CEEEEESSCCSHHHHHHHHTGGGGTCEEEEEC
T ss_pred             HHHHHHHHHHHHh--------CCcceeehhhHHHHHHHHHHhhccCC-CeeecccccchhhhhhhhhhhccCCcccccCC
Confidence            4567788888877        45678899999999999999999999 99999999999865544    45688888886


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      .       .|.+.+++++++++++|++.+|.||+..+.+   +++++++|+++|+++++|+++..-.+    ..|+. +.
T Consensus       131 ~-------~d~~~~~~ai~~~t~lv~~Esp~NP~l~v~D---i~~i~~ia~~~g~~~vvDnT~atP~~----~~Pl~-~G  195 (392)
T d1gc0a_         131 M-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYL----QRPLE-LG  195 (392)
T ss_dssp             T-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHH----CCGGG-GT
T ss_pred             c-------cCHHHHHHhCCCCCeEEEecccccceeeecc---hHHHHHHHHhcCCEEEEecCccCccc----cChHH-hC
Confidence            4       3889999999999999999999999999999   99999999999999999999985222    11222 22


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHH--hhhhc-cccCCCchhHHHHHhhhh
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSI--KACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      .   .|++.|.+|.++..|--+|.+++.+.       ..+.++  ...+. .....+|...+.+.+-|+
T Consensus       196 a---DivihS~TKyi~Ghsd~~~G~v~~~~-------~~~~~~r~~~~~~~~G~~~~p~da~ll~rgl~  254 (392)
T d1gc0a_         196 A---DLVVHSATKYLSGHGDITAGIVVGSQ-------ALVDRIRLQGLKDMTGAVLSPHDAALLMRGIK  254 (392)
T ss_dssp             C---SEEEEETTTTTTCSSSCCCEEEEECH-------HHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHT
T ss_pred             C---CEEEEecceeecCCcccccccccchh-------HHHHHHHHHHHHHccCCcCChhhHHHHHhccc
Confidence            2   29999999999887755555555432       244443  33333 466788888887776654

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.76  E-value=5.9e-17  Score=144.61  Aligned_cols=194  Identities=16%  Similarity=0.158  Sum_probs=150.0

Q ss_pred             CCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHc
Q 021547           82 CYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----FAKRN  155 (311)
Q Consensus        82 ~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----~~~~~  155 (311)
                      .|+.  .+....|++.++++.        ..+..+++++|+.|+.+++.+++++| |+|+++...|.+...    .+...
T Consensus        56 ~Y~R~~nPT~~~LE~~la~LE--------gg~~a~~~sSGmaAi~~~l~~ll~~G-d~vi~~~~~Yg~t~~~~~~~l~~~  126 (397)
T d1y4ia1          56 IYTRLGNPTTDALEKKLAVLE--------RGEAGLATASGISAITTTLLTLCQQG-DHIVSASAIYGCTHAFLSHSMPKF  126 (397)
T ss_dssp             CCCTTSCHHHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTT-CEEEEESSSCHHHHHHHHTHHHHT
T ss_pred             eeeCCCCHHHHHHHHHHHHHh--------CCccceeehHHHHHHHHHHhhccCCC-CeeeeecccccccchhhhcccCCC
Confidence            4554  224456777777776        34668889999999999999999999 999999999986543    56678


Q ss_pred             CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547          156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP  235 (311)
Q Consensus       156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~  235 (311)
                      |+++..++.       .|.+.+++++++++++|++.+|.||+..+.+   +++++++|+++|+++++|++++.-.+    
T Consensus       127 Gi~~~~vd~-------~d~~~~~~~i~~~Tklv~~Esp~NP~l~v~D---i~~i~~iA~~~gi~~vvDnT~atP~~----  192 (397)
T d1y4ia1         127 GINVRFVDA-------GKPEEIRAAMRPETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYC----  192 (397)
T ss_dssp             TCEEEEECT-------TSHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT----
T ss_pred             ceEeeccCC-------CCHHHHHHhcCCCCcEEEecCCcccceeecc---cHHHHHHhhcCCceEEecCcccCccc----
Confidence            999998864       2789999999999999999999999999998   99999999999999999999986221    


Q ss_pred             CCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHH--Hhhhhc-cccCCCchhHHHHHhhhh
Q 021547          236 YIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGS--IKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       236 ~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      ..++. +.   -.|+++|++|.++..+--+|.+++.+.+       .+.+  +..++. ...+.+|+..+.+.+-|+
T Consensus       193 ~~Pl~-~G---aDivihS~TKyi~Ghsdvl~G~v~~~~~-------~~~~~r~~~~~~~~G~~l~p~~a~l~~rgl~  258 (397)
T d1y4ia1         193 QQPLQ-LG---ADIVVHSVTKYINGHGDVIGGIIVGKQE-------FIDQARFVGLKDITGGCMSPFNAWLTLRGVK  258 (397)
T ss_dssp             CCGGG-GT---CSEEEEETTTTTTCSSCCCCEEEEECHH-------HHHHHHHTHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred             Ccchh-cC---CCEEEEehhhhcCCCcceeeeccCCCHH-------HHHHHHHHHHHhCcCCcCCHHHHHHHHcCcC
Confidence            12222 22   2299999999999988777777765532       3433  334333 366788888887776654

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.73  E-value=9.5e-17  Score=143.71  Aligned_cols=193  Identities=16%  Similarity=0.103  Sum_probs=146.8

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecC
Q 021547           64 AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPR  142 (311)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~  142 (311)
                      .++-++++.+.++++.   |...+...++++.++++++        .++++++++||.|+.+++.++ +++| |+|+++.
T Consensus        11 ~~~~~~~~~~~~~~~~---~~~G~~v~~~E~~la~~~g--------~~~ai~~~sgt~Al~~al~al~~~~g-deVi~~~   78 (376)
T d1mdoa_          11 GAEELAAVKTVLDSGW---ITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHIALMALGIGEG-DEVITPS   78 (376)
T ss_dssp             CHHHHHHHHHHHHHTC---CSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTT-CEEEEES
T ss_pred             CHHHHHHHHHHHhcCC---CcCCHHHHHHHHHHHHHHC--------cCeEEEeCCHHHHHHHHHHHhCCCCC-CEEEEec
Confidence            3556688888888763   3334467899999999994        357888899999999999999 7899 9999999


Q ss_pred             CCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547          143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA  222 (311)
Q Consensus       143 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~  222 (311)
                      .+|......+...|.+++.+++++ +.+.+|++.|++.+++++++|++++   ..|...+   +++|.++|+++|++||+
T Consensus        79 ~~~~~~~~ai~~~g~~pv~~d~~~-~~~~~d~~~l~~~i~~~tkaIi~~h---~~G~~~~---~~~i~~i~~~~~i~vIe  151 (376)
T d1mdoa_          79 MTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPVH---YAGAPAD---LDAIYALGERYGIPVIE  151 (376)
T ss_dssp             SSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCBC---GGGCCCC---HHHHHHHHHHHTCCBCE
T ss_pred             ccccccccchhccccceeeecccc-cccCCCHHHHHHhcCCCCeEEEEeC---CCCCccc---hhHHHHHHHhcCceEEe
Confidence            999999999999999999999855 4678999999999999999998765   5677777   88999999999999999


Q ss_pred             eccccCCc-cCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547          223 DEVYGHLA-FGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       223 D~ay~~~~-~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  290 (311)
                      |.+++... +.+...   ..+   +..++-...+|.++.  ..-|.+++.++       ++.++++...
T Consensus       152 D~a~a~g~~~~~~~~---g~~---g~~~~Sf~~~K~l~~--g~GG~i~t~~~-------~l~~~~~~~~  205 (376)
T d1mdoa_         152 DAAHATGTSYKGRHI---GAR---GTAIFSFHAIKNITC--AEGGIVVTDNP-------QFADKLRSLK  205 (376)
T ss_dssp             ECTTCTTCEETTEET---TSS---SEEEEECCTTSSSCS--SSCEEEEESCH-------HHHHHHHHHT
T ss_pred             ccchhccCeeCCeec---ccc---cCccccCCCcCCCCC--CCCCEEEEech-------hHHHHHHhhc
Confidence            99998633 222211   111   112333445687643  33477776553       3666666553

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=3.1e-16  Score=139.51  Aligned_cols=188  Identities=17%  Similarity=0.147  Sum_probs=141.8

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH----HcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK----RNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~----~~g~~~~~~~  163 (311)
                      ....|++.++++-        ..+..+++++|+.|+.+ +..++++| |+|++..+.|.+....++    ..|+++..++
T Consensus        50 t~~~le~~la~LE--------~~~~a~~fsSGMaAisa-ll~ll~~G-d~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d  119 (380)
T d1ibja_          50 TRDALESLLAKLD--------KADRAFCFTSGMAALSA-VTHLIKNG-EEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVN  119 (380)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHH-HHTTSCTT-CEEEEESSCCHHHHHHHHHTSGGGTCEEEEEC
T ss_pred             HHHHHHHHHHHHc--------CCceEEehhhHHHHHHH-HHHhhCCC-CEEEEEecccccccchhhhhhccccccccccC
Confidence            3456777777776        34678889999999975 55678999 999999999988765544    4677777765


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      .       .+.+++++++++++++|++.+|.||+..+.+   +++++++|+++|+++|+|++++.-..    ..++. +.
T Consensus       120 ~-------~~~~~~~~ai~~~t~li~~EtpsNP~l~v~D---i~~i~~iA~~~g~~~vVDnT~atP~~----~~Pl~-~G  184 (380)
T d1ibja_         120 T-------TKLDEVAAAIGPQTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSPVL----SRPLE-LG  184 (380)
T ss_dssp             T-------TSHHHHHHHCCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCTTT----CCGGG-TT
T ss_pred             c-------chHHHHHHHhccCccEEEecccccccccccc---HHHHHHHHHHcCCeEEeecccccccc----ccccc-cC
Confidence            3       3789999999999999999999999999999   99999999999999999999986221    12222 22


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhh
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~  309 (311)
                         -.|+++|++|.++..|--+|-+++.+.+      .+.++++... ......+++..+.+.+-|+
T Consensus       185 ---aDiVvhS~TKyi~GhsDv~~G~v~~~~~------~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~  242 (380)
T d1ibja_         185 ---ADIVMHSATKFIAGHSDVMAGVLAVKGE------KLAKEVYFLQNSEGSGLAPFDCWLCLRGIK  242 (380)
T ss_dssp             ---CSEEEEETTTTTTCSSCCCCEEEEECSH------HHHHHHHHHHHHTTCBCCHHHHHHHHHHHT
T ss_pred             ---CCEEEecccceeccccCccccccccchh------hHHHHHHhhccccCCcCCHHHHHHHHhcch
Confidence               2299999999999988655555444332      3556555553 3456778888777776654

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=3.7e-16  Score=139.09  Aligned_cols=189  Identities=21%  Similarity=0.208  Sum_probs=143.8

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~~  163 (311)
                      ....|++.++++-        ..+..+++++|+.|+..++.+++++| |.|++....|.+..    ......|..+..++
T Consensus        51 t~~~le~~la~LE--------gg~~a~~~sSGMaAi~~~l~~l~~~g-d~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~d  121 (384)
T d1cs1a_          51 TRDVVQRALAELE--------GGAGAVLTNTGMSAIHLVTTVFLKPG-DLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD  121 (384)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTT-CEEEEETTCCHHHHHHHHHHHTTTSCEEEEEC
T ss_pred             HHHHHHHHHHHHh--------CCCceEEecChHHHHHHHHhhccccc-ceecccccccchhhhhhhhhhccccccccccc
Confidence            4556777787777        35678999999999999999999999 99999999997653    34455677777665


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      .       .|.+.+++.+++++++|++.+|.||+..+.+   +++++++|+++|+++|+|+++..-.+    ..++. +.
T Consensus       122 ~-------~d~~~~~~~~~~~t~~v~~EspsNP~l~v~D---i~~i~~ia~~~g~~~vVDNT~atP~~----~~Pl~-~G  186 (384)
T d1cs1a_         122 Q-------GDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPAL----QNPLA-LG  186 (384)
T ss_dssp             T-------TCHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT----CCGGG-GT
T ss_pred             C-------CCHHHHHhhccccccEEEEeccccccceecc---HHHHhhhhhhcCcEEEEeccccCccc----ccccc-cC
Confidence            3       3788999999999999999999999999999   99999999999999999999975221    12222 22


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                         -.|+++|++|.++..|--+|-+++...+      .+...++.. .......+++..+.+.+-|+
T Consensus       187 ---aDiVvhS~TKyi~Ghsdv~~G~vv~~~~------~~~~~~~~~~~~~G~~~~p~~a~ll~rgL~  244 (384)
T d1cs1a_         187 ---ADLVLHSCTKYLNGHSDVVAGVVIAKDP------DVVTELAWWANNIGVTGGAFDSYLLLRGLR  244 (384)
T ss_dssp             ---CSEEEEETTTTTTCSSCCCCEEEEESSH------HHHHHHHHHHHHHTCBCCHHHHHHHHHHHT
T ss_pred             ---CCEEEEccccccccCCCcccccccCCch------hhhhhhhhhhhhhhhccccccHHHHhhccc
Confidence               2299999999999887655554444322      355555554 33456778888777766554

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.70  E-value=5.6e-16  Score=140.45  Aligned_cols=215  Identities=17%  Similarity=0.189  Sum_probs=158.5

Q ss_pred             HHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CC------CCcHHHHHHHHHH
Q 021547           28 FRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYA--PM------FGLPLARRAVAEY   99 (311)
Q Consensus        28 i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~--~~------~g~~~lr~~ia~~   99 (311)
                      ||+.+..+.+.   ..++++|.|+++.     ..+.|+.+.+++.+.+.....+...  ..      .-+++.|+.++++
T Consensus         7 iR~~FP~l~~~---~~~~~~iYld~a~-----~~~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~l   78 (408)
T d1t3ia_           7 VRQDFPILNQE---INGHPLVYLDNAA-----TSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKF   78 (408)
T ss_dssp             HGGGCGGGSCE---ETTEECEECBTTT-----CCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCcccccc---cCCCCeEEeeCcc-----ccCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence            55555443211   2356789999887     3467899999999987643211111  11      1223577888888


Q ss_pred             HhhcCCCCCC-CCCEEEeCChHHHHHHHHHHH----hcCCCCEEEecCCCCcch----HHHHHHcCcEEEEeeccCCCCc
Q 021547          100 LNRDLPYKLS-ADDIYITLGCMEAVEIILTVI----TRLGAANILLPRPGWPFY----ESFAKRNHIEVRHFDLLPERGW  170 (311)
Q Consensus       100 l~~~~g~~~~-~~~v~~t~g~~~a~~~~~~~l----~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~  170 (311)
                      ++      +. ++.+++++++++++++++..+    .++| ++|++..-.|++.    ...++..|..+..++..  .+.
T Consensus        79 lg------a~~~~~i~~~~~tt~~~n~~~~~~~~~~~~~g-~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~--~~~  149 (408)
T d1t3ia_          79 IN------ARSPREIVYTRNATEAINLVAYSWGMNNLKAG-DEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQE  149 (408)
T ss_dssp             TT------CSCGGGEEEESSHHHHHHHHHHHTHHHHCCTT-CEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTS
T ss_pred             hC------CCCcccEEeecchHHHHHHHHhhccccccCCC-CEEEeecccchhhhhhhhhhhhccCceEeeeecc--ccc
Confidence            84      34 577999999999998888763    3588 9999999999864    34567789999988764  345


Q ss_pred             ccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEE
Q 021547          171 EVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVIT  250 (311)
Q Consensus       171 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  250 (311)
                      ..+.+.+++.++++++++.+++.+|.||..+|   +++|.++|+++|+++++|.+++.    |.-+..+..++.+   ++
T Consensus       150 ~~~~~~l~~~~~~~t~lv~i~~~~~~tG~~~p---~~~i~~~~~~~g~~~ivDa~q~~----g~~~id~~~~~~D---~~  219 (408)
T d1t3ia_         150 SFDLEHFKTLLSEKTKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSA----PHYPLDVQLIDCD---WL  219 (408)
T ss_dssp             SBCHHHHHHHCCTTEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHHTCS---EE
T ss_pred             cccHHHhhhccCCCceEEEEecccccccccCc---HHHHhhhhhccCceeeeccceec----ccccccccccCCc---eE
Confidence            67899999999999999999999999999999   88999999999999999999986    3333344444333   89


Q ss_pred             EecCcccCCCCcceeeEEEee
Q 021547          251 LGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       251 i~s~sK~~~~~G~r~G~i~~~  271 (311)
                      +.|.+|++|.+|  +|++.+.
T Consensus       220 ~~s~hK~~gp~G--~g~l~v~  238 (408)
T d1t3ia_         220 VASGHKMCAPTG--IGFLYGK  238 (408)
T ss_dssp             EEEGGGTTSCTT--CEEEEEC
T ss_pred             EeccccccCCCC--ccccccc
Confidence            999999866555  6777664

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.70  E-value=1.4e-15  Score=136.62  Aligned_cols=164  Identities=23%  Similarity=0.199  Sum_probs=128.6

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~~  163 (311)
                      ....|+++++++-        ..+..+++++|+.|+..++.+++++| |+|+++...|.+..    ..+...|+++..++
T Consensus        59 T~~~LE~~la~LE--------~~~~a~~~~SGmaAi~~~~~~l~~~g-d~il~~~~~Yg~t~~l~~~~~~~~gi~~~~~d  129 (421)
T d2ctza1          59 TVDVLEKRLAALE--------GGKAALATASGHAAQFLALTTLAQAG-DNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTS  129 (421)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTT-CEEEECSCCCHHHHHHHHTHHHHTTCEEEECC
T ss_pred             HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhhcccc-cceeecCCcCCchhHHHHHHHhhccccceecc
Confidence            4456777777777        45678899999999999999999999 99999999998754    35667888888875


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccC
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFG  243 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~  243 (311)
                      ..      ...+..++.+++++++|++.+|.||+..+.+   +++|+++|+++|+++|+|++++.-.+.   ..|+. +.
T Consensus       130 ~~------~~~~~~~~~~~~~t~li~~EtpsNP~l~v~D---i~~i~~iA~~~g~~~vvDnT~a~tP~~---~~Pl~-~G  196 (421)
T d2ctza1         130 RE------ERPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGGYL---LRPLA-WG  196 (421)
T ss_dssp             TT------CCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGGTS---CCGGG-GT
T ss_pred             cc------cCcchhccccCCCceEEEEcCCCcceeEecc---hHHHHHHHHhcCCceEeccccccccee---ccccc-cC
Confidence            32      1446667788899999999999999999999   999999999999999999999731111   11222 22


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEeeCCCCc
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATNDPNGV  276 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~  276 (311)
                      .   .|+++|++|.++..|--+|-+++.+.+..
T Consensus       197 a---DiVvhS~TKyl~GHsD~l~G~vv~~~~~~  226 (421)
T d2ctza1         197 A---ALVTHSLTKWVGGHGAVIAGAIVDGGNFP  226 (421)
T ss_dssp             C---SEEEEETTTTTTCSSCCCCEEEEECSCSC
T ss_pred             C---cEEEEechhhccCCCCeEEEEEEcCCcch
Confidence            2   29999999999998877777776555433

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=2.9e-15  Score=133.73  Aligned_cols=188  Identities=11%  Similarity=0.082  Sum_probs=141.8

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~~~  163 (311)
                      ....|++.++++-        ..+..+++++|+.|+.+++.+++++| |+|++....|.+....    +...|+++..++
T Consensus        59 t~~~le~~la~LE--------g~~~a~~~~SGMaAi~~~l~~l~~~G-d~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d  129 (391)
T d1cl1a_          59 THFSLQQAMCELE--------GGAGCVLFPCGAAAVANSILAFIEQG-DHVLMTNTAYEPSQDFCSKILSKLGVTTSWFD  129 (391)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTT-CEEEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred             hHHHHHHHHHHHh--------CCccEEEeccccceeeehhhcccCCC-CeEEEecccccchhhhhhhccccccccccccc
Confidence            4456777777766        45679999999999999999999999 9999999999876544    445677777775


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh--CCEEEEeccccCCccCCCCCCcccc
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL--GILVIADEVYGHLAFGSTPYIPMGV  241 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~--~~~li~D~ay~~~~~~~~~~~~~~~  241 (311)
                      .       .|.+.+++.+++++++|++.+|.||+..+.+   +++++++|+++  |+++++|++++.-.+    ..++. 
T Consensus       130 ~-------~d~~~~~~~i~~~t~~i~~EtpsNP~l~v~D---i~~i~~~a~~~~~g~~~vVDnT~atP~~----~~Pl~-  194 (391)
T d1cl1a_         130 P-------LIGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL----FKALD-  194 (391)
T ss_dssp             T-------TCGGGGGGTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS----SCGGG-
T ss_pred             C-------ccccccccccccccceeeecccCcccccccc---cHHHHHHHHhccCCcEEEEeccccchhh----hcccc-
Confidence            4       2778899999999999999999999999998   88888888765  999999999986321    12232 


Q ss_pred             cCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          242 FGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       242 ~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +.   -.|++.|++|.++..|--+|-+++.+++       +...+... .......++...+.+.+-|+
T Consensus       195 ~G---aDivvhS~TKy~~GhsdvlgG~vv~~~~-------~~~~~~~~~~~~G~~~~p~~a~ll~rgl~  253 (391)
T d1cl1a_         195 FG---IDVSIQAATKYLVGHSDAMIGTAVCNAR-------CWEQLRENAYLMGQMVDADTAYITSRGLR  253 (391)
T ss_dssp             GT---CSEEEEETTTTTTCSSSCCCEEEEECTT-------THHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred             cc---cceEEeecchhccccccccccceecccc-------ccccchhhhhcccccCCchhhhhhhccch
Confidence            22   2299999999999887665555555443       34444433 23456778887777766554

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.69  E-value=1.7e-15  Score=135.30  Aligned_cols=194  Identities=14%  Similarity=0.110  Sum_probs=145.6

Q ss_pred             CCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHc
Q 021547           82 CYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF----AKRN  155 (311)
Q Consensus        82 ~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~----~~~~  155 (311)
                      .|+.  .+....|+++++++.        ..+..+++++|+.|+..++.+++++| |.|++....|.+....    .+..
T Consensus        60 ~Y~R~~nPt~~~LE~~la~LE--------gg~~a~~~sSGMaAi~~~l~~l~~~G-d~iv~~~~~Yg~t~~l~~~~~~~~  130 (398)
T d1qgna_          60 EYGRYGNPTTVVLEEKISALE--------GAESTLLMASGMCASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETILPKM  130 (398)
T ss_dssp             CBGGGCCHHHHHHHHHHHHHH--------TCSEEEEESCHHHHHHHHHHHHSCSS-CEEEEETTSCHHHHHHHHHTGGGG
T ss_pred             eecCCCChHHHHHHHHHHHHh--------CCceEEEecCcchHHHHHHhhccccc-ccccccccccchhhhhhccccccc
Confidence            4553  234456778888876        45678999999999999999999999 9999999999876544    4556


Q ss_pred             CcEEEEeeccCCCCcccCHHHH-HhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCC
Q 021547          156 HIEVRHFDLLPERGWEVDLEAV-EALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGST  234 (311)
Q Consensus       156 g~~~~~~~~~~~~~~~~d~~~l-~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~  234 (311)
                      |+++..++.       .+.+.. +...++++++|++.+|.||+..+.+   +++|+++|+++|+++|+|+++..-.+   
T Consensus       131 gi~~~~~~~-------~~~~~~~~~~~~~~t~~v~~EspsNP~l~v~D---i~~ia~ia~~~g~~~vVDnT~atP~~---  197 (398)
T d1qgna_         131 GITATVIDP-------ADVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLN---  197 (398)
T ss_dssp             TCEEEEECS-------SCHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT---
T ss_pred             ccccccccc-------cchhhhhhhhccccceEEEccCccccccccch---HHHHHHHHhhcCCEEEecceeecccc---
Confidence            777777753       144434 4456789999999999999999999   99999999999999999999985221   


Q ss_pred             CCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh-ccccCCCchhHHHHHhhhh
Q 021547          235 PYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL-GVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       235 ~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~  309 (311)
                       ..++. +.   -.|+++|++|.++..|--+|-+++.+.       +++..++... ......++...+.+.+-|+
T Consensus       198 -~~Pl~-~G---aDiVihS~TKy~~Ghsdv~~G~v~~~~-------~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~  261 (398)
T d1qgna_         198 -QKALA-LG---ADLVLHSATKFLGGHNDVLAGCISGPL-------KLVSEIRNLHHILGGALNPNAAYLIIRGMK  261 (398)
T ss_dssp             -CCTTT-TT---CSEEEECTTTTTTCSSSCCCEEEEECH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHGG
T ss_pred             -CCchh-hC---CCEEEEechhhcCcccceeehhhcchh-------hhhhhhhhhcccCCCcCCHHHHHHHHhcch
Confidence             12222 11   229999999999998876666665543       3566666653 3456788888888777665

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.67  E-value=2.6e-17  Score=144.13  Aligned_cols=166  Identities=15%  Similarity=0.140  Sum_probs=125.9

Q ss_pred             eeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHH
Q 021547           47 VIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEII  126 (311)
Q Consensus        47 ~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~  126 (311)
                      +|||..-.     ...++|++++||.++...  ...|.+.+...+|++.+++++.        .+++++++||++|+.++
T Consensus         1 ~~~~~~~~-----~t~p~p~v~~A~~~a~~g--~~~yg~~p~~~~le~~lA~~~G--------~~~~~~~~sGt~A~~~a   65 (343)
T d1m6sa_           1 MIDLRSDT-----VTKPTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETFG--------KEAALFVPSGTMGNQVS   65 (343)
T ss_dssp             CEECSCGG-----GCCCCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHHHHH
T ss_pred             Cccccccc-----CCCCCHHHHHHHHhhhcC--CcccCCCHHHHHHHHHHHHHHC--------CCeEEEeCCHHHHHHHH
Confidence            46775543     134568899999766432  2257777788999999999983        45789999999999999


Q ss_pred             HHHHhcCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCC------CccEE-EEeCCCCC
Q 021547          127 LTVITRLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADE------NTAAI-VIINPCNP  196 (311)
Q Consensus       127 ~~~l~~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~i-~i~~p~np  196 (311)
                      +.++.++| |.+++..+.|..+.   ......+..+..++.   .....+++.+++.+..      ++..+ +...++++
T Consensus        66 l~a~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  141 (343)
T d1m6sa_          66 IMAHTQRG-DEVILEADSHIFWYEVGAMAVLSGVMPHPVPG---KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRS  141 (343)
T ss_dssp             HHHHCCTT-CEEEEETTCHHHHSSTTHHHHHTCCEEEEECE---ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTT
T ss_pred             HHHHhccC-Cceeccccccceeeecccccccccceeecccc---ccCccCHHHHHHhhhhhhcccccccccccccccccC
Confidence            99999999 99999998887543   344445556665543   3446789988887764      23334 44456789


Q ss_pred             CccCCCHHHHHHHHHHHHHhCCEEEEeccccCCcc
Q 021547          197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAF  231 (311)
Q Consensus       197 tG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~  231 (311)
                      .|.+++.+++.+|.++|+++++++++|++|..+..
T Consensus       142 ~~~~~~~~~l~~i~~~~~~~g~~~~~D~a~~~~~~  176 (343)
T d1m6sa_         142 GGRVVPLENIKEICTIAKEHGINVHIDGARIFNAS  176 (343)
T ss_dssp             TSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHH
T ss_pred             CceecCHHHHHHHHHHHHhcCeEEEeccccccccc
Confidence            99999999999999999999999999999987543

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.67  E-value=2.9e-15  Score=134.62  Aligned_cols=187  Identities=16%  Similarity=0.114  Sum_probs=142.4

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecC
Q 021547           64 AAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPR  142 (311)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~  142 (311)
                      ..+-.+++.+.++++... +....-..++++.+++++        ...+++.+++||.|+.+++.++ +++| |+|+++.
T Consensus        12 ~~~~~~~~~~~l~~g~~~-~~~g~~v~~fE~~~a~~~--------g~~~~v~~~SGt~Al~lal~~l~~~~g-deVi~p~   81 (384)
T d1b9ha_          12 DDAERNGLVRALEQGQWW-RMGGDEVNSFEREFAAHH--------GAAHALAVTNGTHALELALQVMGVGPG-TEVIVPA   81 (384)
T ss_dssp             CHHHHHHHHHHHHTSCCB-TTTCSHHHHHHHHHHHHT--------TCSEEEEESCHHHHHHHHHHHTTCCTT-CEEEEES
T ss_pred             CHHHHHHHHHHHHcCCee-ecCCHHHHHHHHHHHHHH--------CcCeEEEeCCHHHHHHHHHHHcCCCCC-CEEEEec
Confidence            345577888888876431 233345788999999998        3457899999999999999998 5899 9999999


Q ss_pred             CCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547          143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA  222 (311)
Q Consensus       143 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~  222 (311)
                      .+|......+...|.+++.+++. ..++.+|++.+++.+.+++++++++   +..|...+   +.++.++|+++++++|+
T Consensus        82 ~t~~a~~~ai~~~g~~p~~~d~~-~~~~~~d~~~~~~~i~~~tk~i~~~---~~~g~~~d---~~~i~~~~~~~~i~lie  154 (384)
T d1b9ha_          82 FTFISSSQAAQRLGAVTVPVDVD-AATYNLDPEAVAAAVTPRTKVIMPV---HMAGLMAD---MDALAKISADTGVPLLQ  154 (384)
T ss_dssp             SSCTHHHHHHHHTTCEEEEECBC-TTTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCC---HHHHHHHHHHHTCCBCE
T ss_pred             ccccccccccccccccccccccc-ccccccchhhhcccccccccccccc---cccccccc---cccchhhhhhhhhhhhh
Confidence            99999999999999999999874 4567899999999999999998754   45566566   88999999999999999


Q ss_pred             eccccCC-ccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEeeCCC
Q 021547          223 DEVYGHL-AFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDPN  274 (311)
Q Consensus       223 D~ay~~~-~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~  274 (311)
                      |.+++.. .++|.....   +.+  -.++-.+.+|.++.  -.-|.+++.+++
T Consensus       155 D~a~a~ga~~~g~~~g~---~g~--~~~~Sf~~~K~i~~--g~GG~i~t~~~~  200 (384)
T d1b9ha_         155 DAAHAHGARWQGKRVGE---LDS--IATFSFQNGKLMTA--GEGGAVVFPDGE  200 (384)
T ss_dssp             ECTTCTTCEETTEEGGG---SSS--CEEEECCTTSSSCS--SSCEEEEECTTC
T ss_pred             hhceecccccCCEecCc---ccc--cceecccccccccc--cccchhhhhhHH
Confidence            9999863 344443222   221  12444455887543  335788877654

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.65  E-value=3e-15  Score=131.03  Aligned_cols=185  Identities=16%  Similarity=0.135  Sum_probs=140.4

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCcEEEEeeccC
Q 021547           91 LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRNHIEVRHFDLLP  166 (311)
Q Consensus        91 ~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~  166 (311)
                      .|++.++++.        ..+..+++++|++|+..++.+++++| |+|+++.+.|.+..    ..++..|+++..++.. 
T Consensus         2 aLE~~la~Le--------g~~~a~~~sSGMaAi~~~l~~ll~~G-d~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~~-   71 (331)
T d1pffa_           2 ALEGKIAKLE--------HAEACAATASGMGAIAASVWTFLKAG-DHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMA-   71 (331)
T ss_dssp             HHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTT-CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-
T ss_pred             HHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHhCCC-CEEEEeCCCchHHHHHHHHHHHhcCeEEEEeccc-
Confidence            4788888887        45678999999999999999999999 99999999997643    4577899999988652 


Q ss_pred             CCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHH-HHhCCEEEEeccccCCccCCCCCCcccccCCC
Q 021547          167 ERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETA-RKLGILVIADEVYGHLAFGSTPYIPMGVFGSI  245 (311)
Q Consensus       167 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~-~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~  245 (311)
                            |.+.++++++++++++++.+|.||+..+.+   ++++++++ +++|+++|+|+++....+-    .++. +.. 
T Consensus        72 ------d~~~~~~~i~~~t~~i~~Es~~np~~~v~d---~~~~~~~~a~~~~~~~vVDnT~atp~~~----~pl~-~Ga-  136 (331)
T d1pffa_          72 ------VPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPLD-LGV-  136 (331)
T ss_dssp             ------STTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGGG-GTC-
T ss_pred             ------chhhHhhhcccccceeeeeccccccccccc---chhhhhhhhcccCceEEeeccccccccc----cccc-cCC-
Confidence                  788999999999999999999999999999   77777775 5789999999999853221    1222 111 


Q ss_pred             CCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHH--hhhhc-cccCCCchhHHHHHhhhh
Q 021547          246 VPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSI--KACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       246 ~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                        .|+++|++|.++..|--+|-+++.+++       .....  +.... .....++...+.+.+-|+
T Consensus       137 --DiVv~S~TKy~~Gh~d~~~G~v~~~~~-------~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~  194 (331)
T d1pffa_         137 --DIVVHSATKYINGHTDVVAGLVCSRAD-------IIAKVKSQGIKDITGAIISPHDAWLITRGTL  194 (331)
T ss_dssp             --SEEEEETTTTTSSSSSCCCEEEEECHH-------HHHHHHHTCCCCCCCCCCCHHHHHHHHHHHH
T ss_pred             --CEEEecchhhcCCCCcccccccccccc-------chhhhhhhhhhhccCCCCCHHHHHHHHHHHH
Confidence              299999999998877666665554432       33332  22333 356777777777666554

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.61  E-value=3.1e-14  Score=127.13  Aligned_cols=188  Identities=17%  Similarity=0.133  Sum_probs=140.4

Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcch----HHHHHHcCcEEEEee
Q 021547           88 GLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFY----ESFAKRNHIEVRHFD  163 (311)
Q Consensus        88 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~----~~~~~~~g~~~~~~~  163 (311)
                      ....|++.++++-        ..+..+++++|+.|+..++.+++++| |.|++....|.+.    .......|+++..++
T Consensus        60 T~~~le~~la~LE--------g~~~a~~~sSGmaAi~~~~l~l~~~g-d~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~d  130 (394)
T d1e5ea_          60 TVSNLEGKIAFLE--------KTEACVATSSGMGAIAATVLTILKAG-DHLISDECLYGCTHALFEHALTKFGIQVDFIN  130 (394)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTT-CEEEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHHHHh--------CCcceeeeccchHHHHHHHHhhcccc-cccccccceeehhhHhHHHHhhccceeeeccC
Confidence            3345667777666        45678889999999999999999999 9999999999764    346778899999886


Q ss_pred             ccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH-hCCEEEEeccccCCccCCCCCCccccc
Q 021547          164 LLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK-LGILVIADEVYGHLAFGSTPYIPMGVF  242 (311)
Q Consensus       164 ~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~-~~~~li~D~ay~~~~~~~~~~~~~~~~  242 (311)
                      ..       |.+.+++.+++++++|++.+|.||+..+.+   ++++++.+++ +|+++|+|+++..-.+    ..|+. +
T Consensus       131 ~~-------d~~~~~~~i~~~t~lv~~Etp~NP~l~v~D---i~~~~~~~~~~~g~~vvvDnT~atP~~----~~Pl~-~  195 (394)
T d1e5ea_         131 TA-------IPGEVKKHMKPNTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMI----TNPVD-F  195 (394)
T ss_dssp             TT-------STTHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTT----CCGGG-G
T ss_pred             CC-------CHHHHHHhhcccccEEEEeccCCcceeeeh---hhhhhhccccccCeEEEecCcccCccc----CCchh-c
Confidence            52       678899999999999999999999999999   8888887764 6899999999985221    12222 2


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHh--hhhc-cccCCCchhHHHHHhhhh
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIK--ACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      ..   .|+++|++|.++..+-=+|-+++.+.       +.+...+  .++. .....+|+..+.+.+-|+
T Consensus       196 Ga---DiVvhS~TKy~~GhsDv~~G~v~~~~-------~~~~~~~~~~~~~~~G~~lsp~~a~ll~rgl~  255 (394)
T d1e5ea_         196 GV---DVVVHSATKYINGHTDVVAGLICGKA-------DLLQQIRMVGIKDITGSVISPHDAWLITRGLS  255 (394)
T ss_dssp             TC---SEEEEETTTTTTCSSCCCCEEEEECH-------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHT
T ss_pred             CC---CEEEechhhhcCCCcccccccccchh-------hHHHHHHHHHHHHhhCCCCChHHHHHHHhhch
Confidence            22   29999999999887755555554432       2344333  3333 456778888777766554

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.60  E-value=1.7e-14  Score=128.94  Aligned_cols=188  Identities=13%  Similarity=0.074  Sum_probs=137.5

Q ss_pred             HHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHH-hcCCCCEEEecCCCCc
Q 021547           68 EDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVI-TRLGAANILLPRPGWP  146 (311)
Q Consensus        68 ~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~p~~~  146 (311)
                      ++++.+.++++.+.+.++  -...+++.++++++        .+.++.+++||.|+.+++.++ .++| |+|+++..+|.
T Consensus         4 ~~~~~~~l~~~~~~~~G~--~~~~fE~~~~~~~~--------~~~~~~~~SgT~Al~lal~~l~~~~g-deVi~p~~t~~   72 (374)
T d1o69a_           4 LKYIEEVFKSNYIAPLGE--FVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQD-DIVLASSFTFI   72 (374)
T ss_dssp             HHHHHHHHHHTTTSCTTH--HHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTT-CEEEEESSSCG
T ss_pred             HHHHHHHHhcCCcCCCCH--HHHHHHHHHHHHHC--------cCeEEEeCCHHHHHHHHHHHcCCCCc-CEEEeCCcchH
Confidence            467778887664433333  47889999999994        357999999999999999998 6789 99999999999


Q ss_pred             chHHHHHHcCcEEEEeeccCCCCcccCH--HHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEec
Q 021547          147 FYESFAKRNHIEVRHFDLLPERGWEVDL--EAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADE  224 (311)
Q Consensus       147 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~--~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~  224 (311)
                      .....+...|++++.+++++. ....+.  +++.....++++++++++.   .|...+   +.++.++|+++|++||+|.
T Consensus        73 a~~~~~~~~g~~pv~~Di~~~-~~~~~~~~~~~~~~~~~~~~aii~~~~---~G~~~d---~~~i~~~~~~~~i~vIED~  145 (374)
T d1o69a_          73 ASVAPICYLKAKPVFIDCDET-YNIDVDLLKLAIKECEKKPKALILTHL---YGNAAK---MDEIVEICKENDIVLIEDA  145 (374)
T ss_dssp             GGTHHHHHTTCEEEEECBCTT-SSBCHHHHHHHHHHCSSCCCEEEEECG---GGCCCC---HHHHHHHHHHTTCEEEEEC
T ss_pred             hhHHHHhhccceeEecccccc-cccccccccccchhccccccccccccc---ccchhh---hHHHHHHhhccCcchhhhh
Confidence            999999999999999998643 222333  3444567778999988765   344445   9999999999999999999


Q ss_pred             cccCC-ccCCCCCCcccccCCCCCeEEEecCc--ccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh
Q 021547          225 VYGHL-AFGSTPYIPMGVFGSIVPVITLGSIS--KRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC  289 (311)
Q Consensus       225 ay~~~-~~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~  289 (311)
                      +++.. .+.+....+   +.    .+.+.||.  |.++..|  -|.+++.+.       ++.++++.+
T Consensus       146 a~a~g~~~~~~~~G~---~g----d~~~fSf~~~K~l~tge--GG~i~tnn~-------~~~~~~~~~  197 (374)
T d1o69a_         146 AEALGSFYKNKALGT---FG----EFGVYSYNGNKIITTSG--GGMLIGKNK-------EKIEKARFY  197 (374)
T ss_dssp             TTCTTCEETTEETTS---SS----SEEEEECCTTSSSCCSS--CEEEEESCH-------HHHHHHHHH
T ss_pred             hhhhcceECCeecCC---CC----ceEEEeccCcccccccc--ceeehhhhH-------HHHHhhccc
Confidence            99863 334433222   22    16666775  7765443  477776553       466666654

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.59  E-value=1.5e-14  Score=132.57  Aligned_cols=216  Identities=16%  Similarity=0.086  Sum_probs=146.8

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAV  123 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~  123 (311)
                      ..-+|||-.-...    .+    +.++|..++..++ ..|..++.+.+|++.+++++        ..+.++++++|+.|+
T Consensus        41 ~~v~iDl~sDs~t----~a----m~~~~~aa~~~GD-d~Y~~dpt~~~lE~~~a~l~--------G~e~al~~~SGt~An  103 (456)
T d1c7ga_          41 KDIYIDLLTDSGT----NA----MSDKQWAGMMIGD-EAYAGSENFYHLEKTVKELF--------GFKHIVPTHQGRGAE  103 (456)
T ss_dssp             GGCSEECSCSSSC----CC----EEHHHHHHTTSCC-CCSSSCHHHHHHHHHHHHHH--------CCSEEEEESSHHHHH
T ss_pred             cceeeEcccCCCc----cc----chHHHHHHHhccc-hhccCCchHHHHHHHHHHHh--------CCCeEEECCCHHHHH
Confidence            4567787665421    12    2334333333232 26988889999999999999        557899999999999


Q ss_pred             HHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC--------CCCcccCHHHHHhhcCC----CccEEEEe
Q 021547          124 EIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP--------ERGWEVDLEAVEALADE----NTAAIVII  191 (311)
Q Consensus       124 ~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~d~~~l~~~l~~----~~~~i~i~  191 (311)
                      .+++.+++++| |.|++... +..........|...+.+....        ...+.+|++.|++.+++    +++.+++.
T Consensus       104 ~~a~~~l~~~G-d~Vi~~~~-f~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e  181 (456)
T d1c7ga_         104 NLLSQLAIKPG-QYVAGNMY-FTTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLA  181 (456)
T ss_dssp             HHHHHHHCCTT-EEEEESSC-CHHHHHHHHHTTEEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEE
T ss_pred             HHHHHHhcCCC-CeEecCcc-hHHHHHHHHHcCceeeeccccccccccccCCccccCCHHHHHHHhhhcCCccceeEEee
Confidence            99999999999 99987765 4444555677888887665421        13457899999998864    34577888


Q ss_pred             CCCCCC-ccCCCHHHHHHHHHHHHHhCCEEEEeccccCC----------ccCCCCCCccc-ccCCCCCeEEEecCcccCC
Q 021547          192 NPCNPC-GNVLTYQHLQKIAETARKLGILVIADEVYGHL----------AFGSTPYIPMG-VFGSIVPVITLGSISKRWI  259 (311)
Q Consensus       192 ~p~npt-G~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~----------~~~~~~~~~~~-~~~~~~~~i~i~s~sK~~~  259 (311)
                      +++|+. |..++.++++++.++|++||+.+++|+++..-          .|.+.....+. ..-...+ ++..|++|.++
T Consensus       182 ~~~n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad-~~s~s~~K~~~  260 (456)
T d1c7ga_         182 VTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYAD-GCTMSGKKDCL  260 (456)
T ss_dssp             SSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCS-EEEEETTTTTC
T ss_pred             ecccccccceecHHHHHHHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccccc-cEEEecccccc
Confidence            998865 67889999999999999999999999997521          11111111000 0000111 66679999977


Q ss_pred             CCcceeeEEEeeCCCCccchhhHHHHHhh
Q 021547          260 VPGWRFGWLATNDPNGVLQKSGIVGSIKA  288 (311)
Q Consensus       260 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~  288 (311)
                      .++  -|+++.++.       ++.++++.
T Consensus       261 ~~~--GG~i~~~~~-------~l~~~~r~  280 (456)
T d1c7ga_         261 VNI--GGFLCMNDE-------EMFSAAKE  280 (456)
T ss_dssp             CSS--CEEEEESCH-------HHHHHHHH
T ss_pred             ccc--eeEEEcCCH-------HHHHHHHH
Confidence            653  266666543       35555554

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.59  E-value=7.5e-15  Score=132.36  Aligned_cols=205  Identities=11%  Similarity=0.009  Sum_probs=143.3

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCC----C--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN-CYA----P--MFGLPLARRAVAEYLNRDLPYKLSADDIYIT  116 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~----~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t  116 (311)
                      .+++|.|+++.-     .++|..+.+++.+.+...... ...    .  ..-..++|+.+++++      ++++++|++|
T Consensus        25 ~~~~iYLd~as~-----g~~p~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~e~~R~~iA~ll------ga~~~ei~~~   93 (404)
T d1qz9a_          25 PEGVIYLDGNSL-----GARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVVT   93 (404)
T ss_dssp             CTTCEECCTTTS-----CCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEEC
T ss_pred             CCCCEEcCCccc-----ccCCHHHHHHHHHHHHHHhcccCcccccchhHHHHHHHHHHHHHHHh------CCCCCcEEEe
Confidence            467899999872     466788899998887532110 010    0  012346788888887      4688999999


Q ss_pred             CChHHHHHHHHHHH------hcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEE
Q 021547          117 LGCMEAVEIILTVI------TRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVI  190 (311)
Q Consensus       117 ~g~~~a~~~~~~~l------~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i  190 (311)
                      +++|+++..++...      ..++ +.|++.+..|.+........+.++..++..  .....+.+.++++++++++++++
T Consensus        94 ~~~T~~~~~~~~~~~~~~~~~~~~-~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~T~lV~i  170 (404)
T d1qz9a_          94 DTTSINLFKVLSAALRVQATRSPE-RRVIVTETSNFPTDLYIAEGLADMLQQGYT--LRLVDSPEELPQAIDQDTAVVML  170 (404)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHSTT-CCEEEEETTSCHHHHHHHHHHHHHHCSSCE--EEEESSGGGHHHHCSTTEEEEEE
T ss_pred             cCchHHHHHHhhhhhhhhcccCCC-cEEEEeccccchHHHHHHhhhheeeeecee--ccccccchhHHHhcCCCceEEEE
Confidence            99999998776543      2467 788877777665444333333333322221  12345788999999999999999


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          191 INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       191 ~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      ++.+|.||..+|   +++|+++|+++|+.+++|.++...    .-+..+....   ..+++.|.+|.+..+.-.+|++..
T Consensus       171 ~~v~~~tG~~~p---v~~i~~~~~~~~~~~~vD~~q~~g----~~~~~~~~~~---~d~~~~s~~K~~~~~~g~~g~~~~  240 (404)
T d1qz9a_         171 THVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAG----AVPVDLHQAG---ADYAIGCTYKYLNGGPGSQAFVWV  240 (404)
T ss_dssp             ESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTT----TSCCCHHHHT---CSEEEECSSSTTCCCTTCCCEEEE
T ss_pred             ecccccccceec---HHHHhccccccccceeEEeecccc----cccccccccc---ceEEEEechhhcccCCceEEEEEe
Confidence            999999999999   999999999999999999999962    2223333332   238888999987655445666665


Q ss_pred             eC
Q 021547          271 ND  272 (311)
Q Consensus       271 ~~  272 (311)
                      ..
T Consensus       241 ~~  242 (404)
T d1qz9a_         241 SP  242 (404)
T ss_dssp             CT
T ss_pred             ch
Confidence            43

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.58  E-value=1e-13  Score=126.65  Aligned_cols=221  Identities=15%  Similarity=0.021  Sum_probs=159.1

Q ss_pred             CCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC---CEEEeCChH
Q 021547           44 PRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSAD---DIYITLGCM  120 (311)
Q Consensus        44 ~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~---~v~~t~g~~  120 (311)
                      +.+..||...-     ....+|++.+.|.+.+..+.. .+...+...++++.+.+++.+.+|.+....   .=.+|+|+|
T Consensus        52 g~~~~n~asf~-----~t~~~~~~~~l~~~~~~~N~~-~~~~~P~~~~lE~~~v~~la~L~~~p~~~~~~~~G~~t~GgS  125 (450)
T d1pmma_          52 GNARQNLATFC-----QTWDDENVHKLMDLSINKNWI-DKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSS  125 (450)
T ss_dssp             CCGGGBCSCCS-----CCCCCHHHHHHHHHTTTCBTT-CTTTSHHHHHHHHHHHHHHHHHTTCCCCTTSCCSEEEESSHH
T ss_pred             CCccccccccc-----cCCCCHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhCCCccccCCCcCeeeCchH
Confidence            44545666542     245568888888887765433 344344567899999999998888654322   248999999


Q ss_pred             HHHHHHHHHHhc-----------CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEE
Q 021547          121 EAVEIILTVITR-----------LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIV  189 (311)
Q Consensus       121 ~a~~~~~~~l~~-----------~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~  189 (311)
                      +|+.+++.+...           .+...++++...|..+..+++..|+++..++.++ .++.+|++.|++++++++.+|+
T Consensus       126 eA~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~Vv  204 (450)
T d1pmma_         126 EACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDENTIGVV  204 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCTTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCCCceEeeecC-CCCcCcHHHHHHHhhhCceEEE
Confidence            999887776531           1214577888899999999999999999998754 4589999999999999999999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHH---HHHHhCCEEEEeccccCCc--cCCCCCCcccccCCCCCeEEEecCcccCCCCcce
Q 021547          190 IINPCNPCGNVLTYQHLQKIAE---TARKLGILVIADEVYGHLA--FGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWR  264 (311)
Q Consensus       190 i~~p~nptG~~~~~~~l~~l~~---l~~~~~~~li~D~ay~~~~--~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r  264 (311)
                      .+.+++.||.+-+.+++.++++   .|+++|+|+++|.+|+++.  +........  +.-..-.-+..|.+|. +..-..
T Consensus       205 ~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~~~~~~--~~~~~aDSi~~s~HK~-~~~p~g  281 (450)
T d1pmma_         205 PTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWD--FRLPRVKSISASGHKF-GLAPLG  281 (450)
T ss_dssp             CBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCS--TTSTTEEEEEEETTTT-TCCCSS
T ss_pred             eeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeechhhhhh--hcccceeEeecChhhc-cCCCCC
Confidence            9999999999999776655544   3677899999999998753  211111000  1112224677799998 455577


Q ss_pred             eeEEEeeCCC
Q 021547          265 FGWLATNDPN  274 (311)
Q Consensus       265 ~G~i~~~~~~  274 (311)
                      +||+++.++.
T Consensus       282 ~g~l~~r~~~  291 (450)
T d1pmma_         282 CGWVIWRDEE  291 (450)
T ss_dssp             CEEEEESSGG
T ss_pred             eeEEEecChh
Confidence            9999997754

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.58  E-value=1.1e-14  Score=125.84  Aligned_cols=158  Identities=15%  Similarity=0.126  Sum_probs=113.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL  140 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~  140 (311)
                      .+++|.++++|.+..... ...|.+..+.+++|+.+++++.      ..+++|++|+|+|+++..++..+..++ +.+++
T Consensus        10 ~g~~P~v~eAl~~~~~~~-~~~y~~~~~~~~lr~~ia~~~g------~~~~~v~~tsggtean~~a~~~~~~~~-~~~~~   81 (340)
T d1svva_          10 VGMHPKILDLMARDNMTQ-HAGYGQDSHCAKAARLIGELLE------RPDADVHFISGGTQTNLIACSLALRPW-EAVIA   81 (340)
T ss_dssp             SCCCHHHHHHHHHHTTCC-CCSTTCSHHHHHHHHHHHHHHT------CTTSEEEEESCHHHHHHHHHHHHCCTT-EEEEE
T ss_pred             CCCCHHHHHHHHHHhhcC-CCCCCCCHHHHHHHHHHHHHhC------CCcceEEEcCCHHHHHHHHHHHHhhhc-ccccc
Confidence            467899999999876543 3468777778899999999994      467899999999999999999999999 99999


Q ss_pred             cCCCCcchHH--HHHHcCcEEEEeeccCCCCcccCHHHHHhhc------CCCccEEEEeCCCCCCccCCCHHHHHHHHHH
Q 021547          141 PRPGWPFYES--FAKRNHIEVRHFDLLPERGWEVDLEAVEALA------DENTAAIVIINPCNPCGNVLTYQHLQKIAET  212 (311)
Q Consensus       141 ~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l------~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l  212 (311)
                      ..+.|..+..  .....+........  ... ..+.+......      ......++++...|+.|...+.+++..+...
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (340)
T d1svva_          82 TQLGHISTHETGAIEATGHKVVTAPC--PDG-KLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISAS  158 (340)
T ss_dssp             ETTSHHHHSSTTHHHHTTCCEEEECC--TTS-CCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHH
T ss_pred             ccccceeeeecccccccceeeeeccc--ccc-cccchhHHHHhhhhhcccCCcceeeeecccccccccccHHHhhhhhcc
Confidence            9888876543  22223333333322  122 12222222211      1234445556666677788899999999999


Q ss_pred             HHHhCCEEEEeccccCC
Q 021547          213 ARKLGILVIADEVYGHL  229 (311)
Q Consensus       213 ~~~~~~~li~D~ay~~~  229 (311)
                      |++++.++++|++|...
T Consensus       159 ~~~~g~~~~~d~a~~~~  175 (340)
T d1svva_         159 CKEHGLYLFLDGARLAS  175 (340)
T ss_dssp             HHHHTCEEEEECTTHHH
T ss_pred             cccccceeeeeccceee
Confidence            99999999999999753

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.58  E-value=2.1e-14  Score=128.06  Aligned_cols=184  Identities=20%  Similarity=0.149  Sum_probs=132.0

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH----HcCcEEEEeecc
Q 021547           90 PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAK----RNHIEVRHFDLL  165 (311)
Q Consensus        90 ~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~  165 (311)
                      ..|+++++++.        ..+..+++++|+.|+..++ .++.+| |.|++....|.+....++    ..|.++..++  
T Consensus        58 ~~lE~~la~LE--------~~~~a~~~sSGmaAi~~~l-~~l~~g-d~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~--  125 (393)
T d1n8pa_          58 ENLERAVAALE--------NAQYGLAFSSGSATTATIL-QSLPQG-SHAVSIGDVYGGTHRYFTKVANAHGVETSFTN--  125 (393)
T ss_dssp             HHHHHHHHHHT--------TCSEEEEESCHHHHHHHHH-HTSCSS-CEEEEESSCCHHHHHHHHHTSTTTCSCCEEES--
T ss_pred             HHHHHHHHHHh--------CCceEEEecCchhHHHhhh-hcccCC-CeeeeeeeecccchhhhhhhhhcccceeEEee--
Confidence            45555565555        3456788888898987655 566889 999999999987655444    4555555543  


Q ss_pred             CCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHH----HhCCEEEEeccccCCccCCCCCCcccc
Q 021547          166 PERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETAR----KLGILVIADEVYGHLAFGSTPYIPMGV  241 (311)
Q Consensus       166 ~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~----~~~~~li~D~ay~~~~~~~~~~~~~~~  241 (311)
                            .+.+++++.+++++++|++.+|.||+..+.+   +++++++|+    ++|+++|+|++++.-..    ..++. 
T Consensus       126 ------~~~~~~~~~i~~~t~lv~~EspsNP~l~v~D---i~~ia~~a~~~~~~~g~~lvVDnT~atP~~----~~Pl~-  191 (393)
T d1n8pa_         126 ------DLLNDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYI----SNPLN-  191 (393)
T ss_dssp             ------SHHHHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHH----CCGGG-
T ss_pred             ------cchHHHHHHhhhhcceeEecCcchhhhhccc---hhhhhhhhhhhcccCCceEEEecCccCccc----CCchh-
Confidence                  2457899999999999999999999999999   888888888    67899999999985221    11222 


Q ss_pred             cCCCCCeEEEecCcccCCCCccee-eEEEeeCCCCccchhhHHHHHhhhhc-cccCCCchhHHHHHhhhh
Q 021547          242 FGSIVPVITLGSISKRWIVPGWRF-GWLATNDPNGVLQKSGIVGSIKACLG-VRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       242 ~~~~~~~i~i~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  309 (311)
                      +..   .|++.|++|.++..|-=+ |.++..++       .+.++++.... .....+|+..+.+.+-|+
T Consensus       192 ~GA---DiVvhS~TKyi~GhsDv~~G~v~~~~~-------~~~~~l~~~~~~~G~~~~p~~a~ll~rgl~  251 (393)
T d1n8pa_         192 FGA---DIVVHSATKYINGHSDVVLGVLATNNK-------PLYERLQFLQNAIGAIPSPFDAWLTHRGLK  251 (393)
T ss_dssp             GTC---SEEEEETTTTTTCSSCCCCEEEEESCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred             hCC---CEEEEccccccCCCCccccceeeecch-------hHHHHHHHHHhhcCCCCChHHHHHHHhCCc
Confidence            222   299999999998877444 54444332       35666666533 456778888777776654

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.56  E-value=7.3e-14  Score=121.58  Aligned_cols=170  Identities=14%  Similarity=0.094  Sum_probs=129.7

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHH
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVE  124 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~  124 (311)
                      ++.++|+..++     .+++|+++++|.++... ....|..+....++|+.++++++.       ...+++|+|+|+|+.
T Consensus         2 ~~~~~f~s~n~-----~g~~P~v~~A~~~a~~~-~~~~~~~~~~~~~l~~~la~~~g~-------~~~v~f~~sGt~An~   68 (345)
T d1v72a1           2 PPALGFSSDNI-----AGASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIFER-------DVEVFLVPTGTAANA   68 (345)
T ss_dssp             CCCCBCSCGGG-----CCCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHHTS-------CCEEEEESCHHHHHH
T ss_pred             CCCcCcCCCCC-----CCCCHHHHHHHHHHhcc-CccccCCCHHHHHHHHHHHHHHCC-------CcEEEECCchHHHHH
Confidence            57789997763     46799999999987543 344677777888999999999942       246899999999999


Q ss_pred             HHHHHHhcCCCCEEEecCCCCcchH---HHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC------cc-EEEEeCCC
Q 021547          125 IILTVITRLGAANILLPRPGWPFYE---SFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN------TA-AIVIINPC  194 (311)
Q Consensus       125 ~~~~~l~~~g~d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~-~i~i~~p~  194 (311)
                      .++..++..+ +.+++....+....   ......+.....++  ...+...+++.+++.+.+.      +. .++...+.
T Consensus        69 ~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  145 (345)
T d1v72a1          69 LCLSAMTPPW-GNIYCHPASHINNDECGAPEFFSNGAKLMTV--DGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQA  145 (345)
T ss_dssp             HHHHTSCCTT-EEEEECTTSHHHHSSTTHHHHHTTSCEEEEC--CCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESS
T ss_pred             HHHHHHHhcC-CccccccccceeeechhhHHHhcCccccccc--ccccccccHHHhhhhhcccccccccccceeeeeecc
Confidence            9999999888 88887776665432   34444555555543  3345568999999987653      22 34555668


Q ss_pred             CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc
Q 021547          195 NPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA  230 (311)
Q Consensus       195 nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~  230 (311)
                      |+.|...+.++++++..+|++||+++++|+++....
T Consensus       146 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~  181 (345)
T d1v72a1         146 TEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANA  181 (345)
T ss_dssp             CTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHH
T ss_pred             ccccccccchhhhhHHHHHHhcCceeeeccccccee
Confidence            899999999999999999999999999999997643

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.51  E-value=3.4e-14  Score=129.78  Aligned_cols=187  Identities=13%  Similarity=0.045  Sum_probs=130.4

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh---cCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC
Q 021547           90 PLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT---RLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP  166 (311)
Q Consensus        90 ~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~---~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  166 (311)
                      ..+...+.+++.+.+|.+.....++.+.|+..++.+++.++.   .++ +.|+++...|.++...+...|.+.+.++...
T Consensus        93 ~~le~~~~~~~~~l~g~~~~~~~~~~~~~t~~~~~~~l~a~~~~~~~~-~~vi~~~~~H~s~~~a~~~~g~~~~~v~~~~  171 (445)
T d3bc8a1          93 NKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKA-KYIIWPRIDQKSCFKSMVTAGFEPVVIENVL  171 (445)
T ss_dssp             HHHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTC-CEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHhCCCcccCccccccchHHHHHHHHHHHHHhCCCC-CEEEEcCcccHHHHHHHHHcCCeeEEEEeec
Confidence            467777888887777765444444444444455555555552   355 8999999999999999999999999887543


Q ss_pred             -CCCcccCHHHHHhhcC----CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc-cCCCCCCccc
Q 021547          167 -ERGWEVDLEAVEALAD----ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA-FGSTPYIPMG  240 (311)
Q Consensus       167 -~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~-~~~~~~~~~~  240 (311)
                       .+++.+|+++|++.++    +++.++++++|+|++|...+   +++|.++|++||+++|+|++|+... +..+......
T Consensus       172 ~~~~~~id~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~  248 (445)
T d3bc8a1         172 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGA  248 (445)
T ss_dssp             ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHH
T ss_pred             cCcccccCHHHHHHHHHhccccCeEEEEEeCCCCCCeeehh---HHHHHHHHHHhCCcEEEEccchhhhhhccccchhcc
Confidence             4568899999999774    36778888999999999988   9999999999999999999998632 1111100000


Q ss_pred             ccCCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547          241 VFGSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       241 ~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  290 (311)
                      .+  ..-.++..|.+|.++.|. ..|+++..+.       .+.+.+....
T Consensus       249 ~~--~~vd~~~~s~hK~~~~p~-g~~~l~~~~~-------~~~~~~~~~~  288 (445)
T d3bc8a1         249 RV--GRIDAFVQSLDKNFMVPV-GGAIIAGFNE-------PFIQDISKMY  288 (445)
T ss_dssp             HH--SCCCEEEEEHHHHHSCCS-SCEEEEESCH-------HHHHHHHHHS
T ss_pred             Cc--CCcceEEecCccccccCC-CCceeeeCCh-------HHHHHHHHHH
Confidence            11  111277889999866553 4566666543       3555555443

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.50  E-value=1e-13  Score=122.84  Aligned_cols=188  Identities=14%  Similarity=0.081  Sum_probs=131.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCC--CCCCcHHHHHHHHHHHhhcCCCCCCCCC--EEEeCChHHHHHHHHHHHhcCCCC
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYA--PMFGLPLARRAVAEYLNRDLPYKLSADD--IYITLGCMEAVEIILTVITRLGAA  136 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~--v~~t~g~~~a~~~~~~~l~~~g~d  136 (311)
                      .+.++.|+++|.+.    ..++++  ...-..+.|+.++++++      +.+++  +++|+|+|.++++++..+..++ +
T Consensus         9 ~~~~~~V~~A~~~~----~~~~~~~~~~~~~~~~r~~l~~l~~------~~~~~~~i~~t~s~T~~~~~~~~~l~~~~-~   77 (361)
T d1m32a_           9 LTTSRTVKEAMLFD----SCTWDDDYNIGVVEQIRQQLTALAT------ASEGYTSVLLQGSGSYAVEAVLGSALGPQ-D   77 (361)
T ss_dssp             CCCCHHHHHTTCCC----CCTTSHHHHTTTHHHHHHHHHHHHC------SSSSEEEEEEESCHHHHHHHHHHHSCCTT-C
T ss_pred             CCCCHHHHHHhhhh----ccCCCcHHHHHHHHHHHHHHHHHhC------CCCCCEEEEECCCHHHHHHHHHHHhhhhc-c
Confidence            45678887776432    222222  12356788999999884      34444  7788999999999999999888 6


Q ss_pred             EEEecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 021547          137 NILLPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETAR  214 (311)
Q Consensus       137 ~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~  214 (311)
                      .+++....+..  .....+..+.....+..........+.+.......++++.+++++.+|.||...+   ++++.++|+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~~---i~~i~~~~~  154 (361)
T d1m32a_          78 KVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP---IDEVGALAH  154 (361)
T ss_dssp             CEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHH
T ss_pred             ccceeeehhhhhhHHHHhhhhhcccccccccccCCccchhhHHHHHhccCccceEEEeeecccccchh---hhhhhhhhc
Confidence            66666555433  3345556666666655443333333445555566789999999999999999999   999999999


Q ss_pred             HhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC-cceeeEEEee
Q 021547          215 KLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP-GWRFGWLATN  271 (311)
Q Consensus       215 ~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-G~r~G~i~~~  271 (311)
                      ++|+++++|.+++...    .+..+..+   +..+++.|.+|.+++| |  +|++.+.
T Consensus       155 ~~g~~~~vDa~qs~G~----~~~d~~~~---~~D~~~~s~~K~l~gp~G--~g~l~~~  203 (361)
T d1m32a_         155 RYGKTYIVDAMSSFGG----IPMDIAAL---HIDYLISSANKCIQGVPG--FAFVIAR  203 (361)
T ss_dssp             HHTCEEEEECTTTTTT----SCCCTTTT---TCSEEEEESSSTTCCCSS--EEEEEEE
T ss_pred             ccceeeEeecccccCc----cccccccc---ccceEEeeecccccCCCC--ceEEEec
Confidence            9999999999998622    22333333   3459999999998654 6  6666665

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.49  E-value=1.4e-12  Score=116.25  Aligned_cols=191  Identities=15%  Similarity=0.139  Sum_probs=142.5

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc-CC-CCEEEecC
Q 021547           65 AVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR-LG-AANILLPR  142 (311)
Q Consensus        65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~-~g-~d~Vl~~~  142 (311)
                      ++-.+++.+.++++.   |...+-..++++.++++++        .++++.++++|.|+.+++.++.. +| .|+|+++.
T Consensus        12 ~~~~~~v~~~l~~~~---~~~G~~v~~fE~~~~~~~g--------~k~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p~   80 (371)
T d2fnua1          12 KEDKKAVLEVLNSKQ---LTQGKRSLLFEEALCEFLG--------VKHALVFNSATSALLTLYRNFSEFSADRNEIITTP   80 (371)
T ss_dssp             HHHHHHHHHHHTSSC---CSSSHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECS
T ss_pred             HHHHHHHHHHHcCCC---ccCCHHHHHHHHHHHHHHC--------cCeEEEEecHHHHHHHHHHHhcccCCCCCeeeccc
Confidence            566788888887654   3333457889999999993        45789999999999999999853 34 15899999


Q ss_pred             CCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547          143 PGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIA  222 (311)
Q Consensus       143 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~  222 (311)
                      .+|......+...|++++.+++++.  ..++.+++++.++++++++++++   ..|...+   +.++.++|++++++||+
T Consensus        81 ~t~~a~~~ai~~~G~~pv~vDi~~~--~~~~~~~~~~~~~~~t~avi~vh---~~G~~~~---~~~i~~~~~~~~i~lIE  152 (371)
T d2fnua1          81 ISFVATANMLLESGYTPVFAGIKND--GNIDELALEKLINERTKAIVSVD---YAGKSVE---VESVQKLCKKHSLSFLS  152 (371)
T ss_dssp             SSCTHHHHHHHHTTCEEEECCBCTT--SSBCGGGSGGGCCTTEEEEEEEC---GGGCCCC---HHHHHHHHHHHTCEEEE
T ss_pred             ccccccceeeeccCccccccccccc--ccccchhhhhhccchhhcccccc---ccccccc---cccccccccccchhhcc
Confidence            9999999999999999999998653  24566888889999999998775   4566666   88999999999999999


Q ss_pred             eccccCCc-cCCCCCCcccccCCCCCeEEEecC--cccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhh
Q 021547          223 DEVYGHLA-FGSTPYIPMGVFGSIVPVITLGSI--SKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACL  290 (311)
Q Consensus       223 D~ay~~~~-~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  290 (311)
                      |.+++... +.+.....   +.+    +.+.||  +|.+...+  -|.+++.+.       ++.++++...
T Consensus       153 Daaqa~Ga~~~~~~~G~---~g~----~~~~Sf~~~K~l~~g~--GG~i~t~~~-------~~~~~~~~~~  207 (371)
T d2fnua1         153 DSSHALGSEYQNKKVGG---FAL----ASVFSFHAIKPITTAE--GGAVVTNDS-------ELHEKMKLFR  207 (371)
T ss_dssp             ECTTCTTCEETTEETTS---SSS----EEEEECCTTSSSCCSS--CEEEEESCH-------HHHHHHHHHT
T ss_pred             chhhccCceeccccCCc---ccc----cccccccccccccccc--ceEEEeech-------hhhhhccccc
Confidence            99998643 33332222   111    445555  88865433  577777653       4677776653

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=7.6e-14  Score=125.00  Aligned_cols=195  Identities=15%  Similarity=0.114  Sum_probs=133.5

Q ss_pred             eecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHH
Q 021547           48 IPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEI  125 (311)
Q Consensus        48 i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~  125 (311)
                      +=|+-| |     .+.++.|+++|...    ...+-++  ..-+.+.|+.++++++.    + +...|+++.|+|+++++
T Consensus        21 ~l~~pG-P-----~~~~~~Vl~am~~~----~i~HRs~~f~~i~~ea~~~l~~llg~----~-~~~~ii~~gsgT~a~~~   85 (388)
T d1h0ca_          21 LLLGPG-P-----SNLPPRIMAAGGLQ----MIGSMSKDMYQIMDEIKEGIQYVFQT----R-NPLTLVISGSGHCALEA   85 (388)
T ss_dssp             EECSSS-C-----CCCCHHHHHHHTCC----CCCTTSHHHHHHHHHHHHHHHHHHTC----C-CSEEEEESSCHHHHHHH
T ss_pred             ccccCC-C-----CCCCHHHHHHhCcC----CCCCCCHHHHHHHHHHHHHHHHHhCC----C-CCcEEEEcCcHHHHHHH
Confidence            446655 2     35678888887422    1212211  11245566666666632    1 23368889999999999


Q ss_pred             HHHHHhcCCCCEEEecCCCCcchH--HHHHHcCcEEEEeeccCCCCcccCHHHHHhhc-CCCccEEEEeCCCCCCccCCC
Q 021547          126 ILTVITRLGAANILLPRPGWPFYE--SFAKRNHIEVRHFDLLPERGWEVDLEAVEALA-DENTAAIVIINPCNPCGNVLT  202 (311)
Q Consensus       126 ~~~~l~~~g~d~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~  202 (311)
                      ++..++.+| +++++....+....  ..+...+.....+..  ..+...+.+.+++.+ +.+++++++++.+|.||...|
T Consensus        86 ~i~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~tG~i~p  162 (388)
T d1h0ca_          86 ALVNVLEPG-DSFLVGANGIWGQRAVDIGERIGARVHPMTK--DPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQP  162 (388)
T ss_dssp             HHHHHCCSS-CCEEECBSSHHHHHHHHHHHHHC--CBCCBC--CTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC
T ss_pred             HHHHhhccC-Cceeeecccceeeeecccccccccccccccc--CCccccchHHHHHHhccCCcceEEEeeeeeccccccC
Confidence            999999999 99999988887543  344555555555543  344567888887754 558899999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEee
Q 021547          203 YQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLATN  271 (311)
Q Consensus       203 ~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~  271 (311)
                         ++++.++|+++|+++++|.+++...    ....+..+.   ..+++.|..|.++.|+ .+|+++..
T Consensus       163 ---i~~i~~~~~~~g~~~~vD~~qs~g~----~~~d~~~~~---~D~~~~s~~K~~~gp~-g~~~~~~~  220 (388)
T d1h0ca_         163 ---LDGFGELCHRYKCLLLVDSVASLGG----TPLYMDRQG---IDILYSGSQKALNAPP-GTSLISFS  220 (388)
T ss_dssp             ---CTTHHHHHHTTTCEEEEECTTTTTT----SCCCTTTTT---CSEEEEESSSTTCCCT-TCEEEEEC
T ss_pred             ---HHHHHHHhhcccccceecccccccc----ccccccccc---cceecccccccccCCC-ceEEEeec
Confidence               9999999999999999999998622    222333322   3389999999986654 34555543

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.46  E-value=8.1e-14  Score=128.06  Aligned_cols=139  Identities=17%  Similarity=0.202  Sum_probs=108.0

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCC------CCEEEecCCCCcchHHHHHHc
Q 021547           82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLG------AANILLPRPGWPFYESFAKRN  155 (311)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g------~d~Vl~~~p~~~~~~~~~~~~  155 (311)
                      .|..+.+..+|++++++++        ..++++++++|++|+.+++.+++++|      ...++.....|..+.......
T Consensus        70 ~y~~~~~~~~le~~~a~l~--------g~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~i~~~~h~~t~~~~~~~~  141 (465)
T d1ax4a_          70 AYAGSRNYYDLKDKAKELF--------NYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELN  141 (465)
T ss_dssp             CSSSCHHHHHHHHHHHHHH--------CCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHT
T ss_pred             hhccChHHHHHHHHHHHHH--------CCCEEEECCCcHHHHHHHHHHHHHHHHhcCCCCCeEEeccchhhhhHHHHHHc
Confidence            6888888999999999999        45789999999999999999997654      123556666666677778888


Q ss_pred             CcEEEEeecc--------CCCCcccCHHHHHhhcCC----CccEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHhCCEEEE
Q 021547          156 HIEVRHFDLL--------PERGWEVDLEAVEALADE----NTAAIVIINPCNPC-GNVLTYQHLQKIAETARKLGILVIA  222 (311)
Q Consensus       156 g~~~~~~~~~--------~~~~~~~d~~~l~~~l~~----~~~~i~i~~p~npt-G~~~~~~~l~~l~~l~~~~~~~li~  222 (311)
                      |...+.+...        ....+.+|.+.+++++++    .+..+++..++|.. |..++.++++++.++|++||+++|+
T Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~g~~l~~  221 (465)
T d1ax4a_         142 GCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVM  221 (465)
T ss_dssp             TCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCeeecccccccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCceecCCHHHHHHHHHHHHHcCCEEEE
Confidence            9888766432        223467899999998753    33445555556654 4578999999999999999999999


Q ss_pred             eccccC
Q 021547          223 DEVYGH  228 (311)
Q Consensus       223 D~ay~~  228 (311)
                      |+++..
T Consensus       222 D~~~~~  227 (465)
T d1ax4a_         222 DSARFC  227 (465)
T ss_dssp             ECTTHH
T ss_pred             ECcchh
Confidence            999863

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.46  E-value=1.3e-12  Score=116.95  Aligned_cols=242  Identities=17%  Similarity=0.141  Sum_probs=159.3

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++++|||..|.-....+ -.+|.+.+++.++++......+.   -..+.+..+++.+.....  ...+.+++++++++
T Consensus        34 ~dG~~ylD~~~g~~~~~lG-h~hp~v~~a~~~~~~~~~~~~~~---~~~~~~~~la~~l~~~~~--~~~~~v~f~~sGse  107 (387)
T d1vefa1          34 AEGNEYIDCVGGYGVANLG-HGNPEVVEAVKRQAETLMAMPQT---LPTPMRGEFYRTLTAILP--PELNRVFPVNSGTE  107 (387)
T ss_dssp             TTSCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHHHCCCCCTT---SCCHHHHHHHHHHHHTSC--TTEEEEEEESSHHH
T ss_pred             CCCCEEEEcchhHHhhhhc-CCcHHHHHHHHHHHHhhcccccc---cCCchHHHHHHHhhhhcc--ccceeeccccCchH
Confidence            3589999997652111111 25799999999998753222221   123455566666655322  23357999999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHH-cC------------cEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547          122 AVEIILTVITR-LGAANILLPRPGWPFYESFAKR-NH------------IEVRHFDLLPERGWEVDLEAVEALADENTAA  187 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~-~g------------~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  187 (311)
                      |++.+++.... .+..+|+.....|.+....+.. .+            ..+..+|.       -|.+.|++.+.++..+
T Consensus       108 A~e~Aik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~p~-------~d~~~l~~~~~~~iAa  180 (387)
T d1vefa1         108 ANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-------NDVEALKRAVDEETAA  180 (387)
T ss_dssp             HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-------TCHHHHHHHCCTTEEE
T ss_pred             HHHHHHHHHHhhcccceecccccCCCCCccceEeccCCccccCCCCCCCCCceEeCC-------CCHHHHHHhcCCCeEE
Confidence            99998887643 3447888888888654322222 22            12333332       2789999999888777


Q ss_pred             EEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceee
Q 021547          188 IVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFG  266 (311)
Q Consensus       188 i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G  266 (311)
                      +++.......|. ..+++-++++.++|++||+++|.||++.++...|.. .....++-.++++   +++|.++ .|..++
T Consensus       181 vi~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~-~~~~~~~v~PDi~---~~gK~l~-gG~~~~  255 (387)
T d1vefa1         181 VILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKR-FAFEHFGIVPDIL---TLAKALG-GGVPLG  255 (387)
T ss_dssp             EEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCSEE---EECGGGG-TTSSCE
T ss_pred             EEEECCCCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccCCC-cccccCCcCCcee---eecccCC-CCcccc
Confidence            666544555565 467888999999999999999999999987555532 2333444444555   6789854 578888


Q ss_pred             EEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          267 WLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       267 ~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .++...        +++..+... .+.+++.+|++.+++.+.|+
T Consensus       256 ~~~~~~--------~~~~~~~~~~~g~T~~gnPla~aaa~a~L~  291 (387)
T d1vefa1         256 VAVMRE--------EVARSMPKGGHGTTFGGNPLAMAAGVAAIR  291 (387)
T ss_dssp             EEEEEH--------HHHHTSCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred             ccccce--------eeeeccccCCccccCCCCcchhhhcccchh
Confidence            887753        355554443 34567889999998887764

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.45  E-value=2.2e-13  Score=123.95  Aligned_cols=183  Identities=13%  Similarity=0.102  Sum_probs=128.3

Q ss_pred             HHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhc--CCCCEEEecCCCCcchHHHHHHcCcEEEEeeccC-CC
Q 021547           92 ARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITR--LGAANILLPRPGWPFYESFAKRNHIEVRHFDLLP-ER  168 (311)
Q Consensus        92 lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~  168 (311)
                      +...+..++.+..|.  .....++..|+++++.+++.++..  ++ ++|+++...|+.+...+...|++.+.++..+ .+
T Consensus       114 ~~~~~~~~~~~~~g~--~~~~~~~~~~t~~~~~~~l~a~r~~~~~-~~vi~s~~~H~s~~k~~~~~g~~~~~v~~~~~~~  190 (434)
T d2z67a1         114 LTNKILESFFKQLGL--NVHAIATPISTGMSISLCLSAARKKYGS-NVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGD  190 (434)
T ss_dssp             HHHHHHHHHHHHTTC--CCEEEEESSCHHHHHHHHHHHHHHHHCC-CEEEEECCCCHHHHHHHHHTTCEEEEECCEEETT
T ss_pred             HHHHHHHHHHHhcCC--CcceeecCcHHHHHHHHHHHHHHHhhcC-ceEEEeccCCHHHHHHHHHhCCcceEEEeecCCC
Confidence            334444444444443  233455566777777777777643  67 9999999999999999999999999887543 34


Q ss_pred             CcccCHHHHHhhcCC-----CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCc-cCCCCCCccccc
Q 021547          169 GWEVDLEAVEALADE-----NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLA-FGSTPYIPMGVF  242 (311)
Q Consensus       169 ~~~~d~~~l~~~l~~-----~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~-~~~~~~~~~~~~  242 (311)
                      .+.+|+++|++.+++     ++.++++++|++++|...+   +++|.++|++||+++++|++|+... +.+........+
T Consensus       191 ~~~~d~~~l~~~i~~~~~~~~~~~v~~~~~~~~~g~~~~---l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~~~~  267 (434)
T d2z67a1         191 RVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY  267 (434)
T ss_dssp             EEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS
T ss_pred             ccCCCHHHHHHHHHhhhhcCCceEEEeccCcCCCccccC---HHHHHHHHHHhCCeEEEeccchhhhhhccccccccccC
Confidence            578999999998863     5777888899999999988   9999999999999999999998533 111111111111


Q ss_pred             CCCCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc
Q 021547          243 GSIVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG  291 (311)
Q Consensus       243 ~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  291 (311)
                         +-.+++.|++|.++.| ...|++...++       +++++++....
T Consensus       268 ---~~D~~~~s~hK~l~~~-~g~~~~~~~~~-------~~~~~~~~~~~  305 (434)
T d2z67a1         268 ---RVDAVVSSSDKNLLTP-IGGGLVYSTDA-------EFIKEISLSYP  305 (434)
T ss_dssp             ---CCSEEEEEHHHHHCCC-SSCEEEEESCH-------HHHHHHHTTSC
T ss_pred             ---CcceEEEcCccccccC-CCccccccCcH-------HHHHHHHhhcc
Confidence               1237888999986654 34456665543       36667666543

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.45  E-value=1e-12  Score=119.28  Aligned_cols=238  Identities=16%  Similarity=0.089  Sum_probs=154.5

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.+|||..|.-....+. .+|.+.+++++++.....  +..   .......+++.+....+   ..+.+++++++++
T Consensus        49 ~~G~~ylD~~~~~~~~~lGh-~hp~i~~ai~~~~~~~~~--~~~---~~~~~~~la~~~~~~~~---~~~~v~f~~sGse  119 (427)
T d2gsaa_          49 VDGNRYIDYVGTWGPAICGH-AHPEVIEALKVAMEKGTS--FGA---PCALENVLAEMVNDAVP---SIEMVRFVNSGTE  119 (427)
T ss_dssp             TTSCEEEESSGGGTTTTTCB-TCHHHHHHHHHHHTTCSC--CSS---CCHHHHHHHHHHHHHST---TCSEEEEESSHHH
T ss_pred             CCCCEEEEechhHHHHhccC-CcHHHHHHHHHHHHhcCc--ccc---chhHHHHHHHHHHhhCC---ccccccccCCcHH
Confidence            35899999977632111122 589999999999875332  111   12345556666665443   3468999999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEecCCCCcchHHHH--------HHcCc------------EEEEeeccCCCCcccCHHHHHhh
Q 021547          122 AVEIILTVITR-LGAANILLPRPGWPFYESFA--------KRNHI------------EVRHFDLLPERGWEVDLEAVEAL  180 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~--------~~~g~------------~~~~~~~~~~~~~~~d~~~l~~~  180 (311)
                      |++.+++.... .|+.+|+.....|.+....+        ...+.            ....++       .-|++.+++.
T Consensus       120 A~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~~~~~le~~  192 (427)
T d2gsaa_         120 ACMAVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTP-------YNDLEAVKAL  192 (427)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEEC-------TTCHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceeccC-------cchHHHHHHH
Confidence            99999887653 34478998888886532111        11111            111111       2378889988


Q ss_pred             cCC---CccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcc
Q 021547          181 ADE---NTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISK  256 (311)
Q Consensus       181 l~~---~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK  256 (311)
                      +++   +..++++.......|. ..+++-+++|.++|++||+++|.||++.++. .|. ......++-.++++   .++|
T Consensus       193 ~~~~~~~iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~r-~g~-~~~~~~~gi~PDi~---~~gK  267 (427)
T d2gsaa_         193 FAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFR-IAY-GGVQEKFGVTPDLT---TLGK  267 (427)
T ss_dssp             HTTSTTTEEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTT-TBT-TCHHHHTTCCCSEE---EECG
T ss_pred             HHhCCCCeEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccccce-ecc-cchHHhcCCCHHHH---hhhh
Confidence            874   3444444443444565 4567779999999999999999999998873 343 33444454455555   6788


Q ss_pred             cCCCCcceeeEEEeeCCCCccchhhHHHHHhhh----hccccCCCchhHHHHHhhhh
Q 021547          257 RWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC----LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       257 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .++ .|..+|.+++.+        ++++.+...    ...+++.+|++.+++.+.|+
T Consensus       268 ~lg-gG~p~~a~~~~~--------~i~~~~~~~~~~~~~~T~~gnpla~AAala~Le  315 (427)
T d2gsaa_         268 IIG-GGLPVGAYGGKR--------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLE  315 (427)
T ss_dssp             GGG-TTSCCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred             ccC-CCcceeeeeehH--------HHHHHhcccCCCcCCCCCCCCchhhHHHHHhhH
Confidence            754 588999988743        366655532    33467889999888887664

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.44  E-value=4.7e-12  Score=112.89  Aligned_cols=192  Identities=11%  Similarity=0.084  Sum_probs=132.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCC--CCCCCCEEEeCChHHHHHHHHHHHh---cCCC
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPY--KLSADDIYITLGCMEAVEIILTVIT---RLGA  135 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~--~~~~~~v~~t~g~~~a~~~~~~~l~---~~g~  135 (311)
                      .+.++.|+++|..    ....++++  ...++.+.+.+.+++.++.  +.+.+.|++|+|+|+++++++..+.   ++| 
T Consensus        12 ~~v~~~V~~Am~~----~~~~hr~~--~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~~~~g-   84 (382)
T d2bkwa1          12 IILSGAVQKALDV----PSLGHTSP--EFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPN-   84 (382)
T ss_dssp             CCCCHHHHHTTSC----CCCCTTSH--HHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSC-
T ss_pred             CCCCHHHHHHhCc----ccCCCCcH--HHHHHHHHHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHHHHHHHHHHhcCCC-
Confidence            4567888877631    12222322  2333334444444444442  3456679999999999999999996   578 


Q ss_pred             CEEEecCCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHhhc-CCCccEEEEeCCCCCCccCCCHHHHHHHHHH
Q 021547          136 ANILLPRPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEALA-DENTAAIVIINPCNPCGNVLTYQHLQKIAET  212 (311)
Q Consensus       136 d~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l  212 (311)
                      |+|++....+...  ...++..+.....+... ..+...+.+.+++.+ ..+++.+++++.+|.||...+   +..+.+.
T Consensus        85 d~vlv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~---~~~~~~~  160 (382)
T d2bkwa1          85 KNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSD---LKAISQA  160 (382)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHH
T ss_pred             CceEEEEechhhhhhhhhcccccccccccccc-CCCCccchhHHHHHhhhccchheeeeecccccccccc---chhhhhh
Confidence            9999988777653  45667788887776543 234456778777755 457899999999999999999   7777777


Q ss_pred             HHHh--CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC-CCCcceeeEEEeeC
Q 021547          213 ARKL--GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW-IVPGWRFGWLATND  272 (311)
Q Consensus       213 ~~~~--~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~  272 (311)
                      |+++  ++++++|.+++.    |.-+..+..+.   -.+++.|.+|.+ |.+|  +|+++++.
T Consensus       161 ~~~~~~~~~~~vDa~qs~----g~~pid~~~~g---iD~~~~s~~K~l~gP~G--~g~l~vs~  214 (382)
T d2bkwa1         161 IKQTSPETFFVVDAVCSI----GCEEFEFDEWG---VDFALTASQKAIGAPAG--LSISLCSS  214 (382)
T ss_dssp             HHHHCTTSEEEEECTTTT----TTSCCCTTTTT---CSEEEEESSSTTCCCSC--EEEEEECH
T ss_pred             ccccccceeeeeeccccc----ccccccccccC---eeEEeecccccCcCCCc--hhhhhccH
Confidence            7666  599999999986    22333443333   238999999998 4456  67777653

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=3.6e-12  Score=114.71  Aligned_cols=239  Identities=15%  Similarity=0.039  Sum_probs=153.3

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN-CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      +++.+|||..|.-... .--.+|.+.+++.++++..... .+....-..++.+.+++..        ..+.+++++++++
T Consensus        39 dG~~ylD~~~g~~~~~-lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~sGse  109 (404)
T d2byla1          39 EGRKYFDFLSSISAVN-QGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLF--------NYHKVLPMNTGVE  109 (404)
T ss_dssp             TCCEEEESSHHHHTCT-TCBTCHHHHHHHHHHHTTCCCCCTTEEESSHHHHHHHHHHHH--------TCSEEEEESSHHH
T ss_pred             CCCEEEEecCCHHHHh-hcCCCHHHHHHHHHHHhhCCCcccccccchHHHHHHhhhhcc--------cccccccccCccc
Confidence            5889999987621111 1226789999999998753321 1212223344555555544        4468999999999


Q ss_pred             HHHHHHHHHhc---------CCCCEEEecCCCCcchHHHHHHc--------C-----cEEEEeeccCCCCcccCHHHHHh
Q 021547          122 AVEIILTVITR---------LGAANILLPRPGWPFYESFAKRN--------H-----IEVRHFDLLPERGWEVDLEAVEA  179 (311)
Q Consensus       122 a~~~~~~~l~~---------~g~d~Vl~~~p~~~~~~~~~~~~--------g-----~~~~~~~~~~~~~~~~d~~~l~~  179 (311)
                      |++.+++....         .+..+++.....|..........        +     ..+..+|.       -|++.+++
T Consensus       110 A~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~~~~p~~~~~~~~p~-------~d~~~l~~  182 (404)
T d2byla1         110 AGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALER  182 (404)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHTTSCSCCTTEEEECT-------TCHHHHHH
T ss_pred             cchhHHHHHHHHhhhccccccccccccccCCCccccccceeccCCCcccccCCCCCCCCeeEecc-------cCHHHHHH
Confidence            99999887631         22256776666665321111111        1     11222322       37889999


Q ss_pred             hcCCCccEEEEeCC-CCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCccc
Q 021547          180 LADENTAAIVIINP-CNPCG-NVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR  257 (311)
Q Consensus       180 ~l~~~~~~i~i~~p-~nptG-~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~  257 (311)
                      .+.++..+.++.-| ....| ..++++-+++|.++|++||+++|+||++.++...|. ......++-.++++   +++|.
T Consensus       183 ~l~~~~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~-~~a~~~~gv~PDi~---~~gK~  258 (404)
T d2byla1         183 ALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR-WLAVDYENVRPDIV---LLGKA  258 (404)
T ss_dssp             HHTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGGTCCCSEE---EECGG
T ss_pred             hcCCCCeEEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEeeccccccccccc-cchhhhcCCCCCEE---EECch
Confidence            88765444445555 55556 456777899999999999999999999988755553 33444444444445   89999


Q ss_pred             CCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       258 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++..++.+|.+++..        ++.+.+... ...+++.+|++.+++.+.|+
T Consensus       259 l~gG~~p~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~  303 (404)
T d2byla1         259 LSGGLYPVSAVLCDD--------DIMLTIKPGEHFSTYGGNPLGCRVAIAALE  303 (404)
T ss_dssp             GGTTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred             hhCCCccceeeeech--------hhhhccCCCCCCcCCCcCHHHHHHHHHHHH
Confidence            765448999999853        355555544 33567889999998887764

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.42  E-value=3.7e-12  Score=116.84  Aligned_cols=185  Identities=11%  Similarity=0.041  Sum_probs=134.1

Q ss_pred             CCCCCCCCcHHHHHHHHHHHhhcCCCCC-------CCCCEEEeCChHHHHHHHHHHHhc----------CC--------C
Q 021547           81 NCYAPMFGLPLARRAVAEYLNRDLPYKL-------SADDIYITLGCMEAVEIILTVITR----------LG--------A  135 (311)
Q Consensus        81 ~~Y~~~~g~~~lr~~ia~~l~~~~g~~~-------~~~~v~~t~g~~~a~~~~~~~l~~----------~g--------~  135 (311)
                      ..|..++...+++..+.+|+.+.+|++-       ....-++|+|++.++..++.+...          .|        .
T Consensus       103 ~~~~~sp~~t~iE~~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~~~~~~~~~g~~~~~~~~~  182 (476)
T d1js3a_         103 FSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEK  182 (476)
T ss_dssp             SSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHH
T ss_pred             cchhhhhhHHHHHHHHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHHHhhcccccCcccccccCc
Confidence            3555566778999999999999888753       223458899999988877755421          11        0


Q ss_pred             CEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCC------ccEEEEeCCCCCCccCCCHHHHHHH
Q 021547          136 ANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADEN------TAAIVIINPCNPCGNVLTYQHLQKI  209 (311)
Q Consensus       136 d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~i~i~~p~nptG~~~~~~~l~~l  209 (311)
                      -.|+++.-.|.++...+...|+++..++.+  +++.+|++.|++.+++.      +.+|+.+..++.+|.+-|   +++|
T Consensus       183 ~vv~~s~~~H~Si~ka~~~lGl~~~~v~~d--~~~~md~~~L~~~i~~~~~~g~~p~~VvataGtt~~G~iDp---l~~I  257 (476)
T d1js3a_         183 LVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDN---LLEV  257 (476)
T ss_dssp             EEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHH
T ss_pred             eEEEecccccHHHHHHHHhcCceEEEeccC--CCCCcCHHHHHHHHHHHHhcCCCcEEEeecCCCccceeecc---HHHH
Confidence            258889999999999999999999988764  56789999999988642      334555567899999999   9999


Q ss_pred             HHHHHHhCCEEEEeccccCCccCCCCCC-cccccCCCCCeEEEecCcccCCCCcceeeEEEeeCC
Q 021547          210 AETARKLGILVIADEVYGHLAFGSTPYI-PMGVFGSIVPVITLGSISKRWIVPGWRFGWLATNDP  273 (311)
Q Consensus       210 ~~l~~~~~~~li~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~~~~  273 (311)
                      .++|++||+|+++|.+|+++..--.... -+..+..  -.-+..+++|.++.| ..+|.+++.++
T Consensus       258 ~~i~~~~~~wlHVDAA~Gg~~~~~~~~~~~~~gi~~--aDSit~d~HK~l~~P-~~~g~~l~r~~  319 (476)
T d1js3a_         258 GPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEF--ADSFNFNPHKWLLVN-FDCSAMWVKRR  319 (476)
T ss_dssp             HHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGG--CSEEEECHHHHSSCC-SSCEEEEESCH
T ss_pred             HHHHHhcCcEEEEecccchhhhhhcchhhhhcCCcc--cceeeecCccccccC-Ccceeecccch
Confidence            9999999999999999987543111111 1111111  114555999996555 57788888653

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.39  E-value=1e-12  Score=120.40  Aligned_cols=174  Identities=13%  Similarity=0.017  Sum_probs=113.4

Q ss_pred             CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE-eCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHH-cCcEEE
Q 021547           83 YAPMFGLPLARRAVAEYLNRDLPYKLSADDIYI-TLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKR-NHIEVR  160 (311)
Q Consensus        83 Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~-t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~  160 (311)
                      +.+..-+.++++.+|++++        .++.++ ++|+++++.+++.+++++| |+||++..+|.+....+.. .+..++
T Consensus        62 ~~~~~~i~eae~~~A~~~g--------a~~a~f~~~Gtt~~n~a~i~a~~~~g-d~Vi~~~~~H~Sv~~~~~~l~~~~~~  132 (462)
T d1c4ka2          62 LIHEGPAVAAEKHAARVYN--------ADKTYFVLGGSSNANNTVTSALVSNG-DLVLFDRNNHKSVYNSALAMAGGRPV  132 (462)
T ss_dssp             TTTBTHHHHHHHHHHHHTT--------CSEEEEESSHHHHHHHHHHHHHCCTT-CEEEEETTCCHHHHHHHTTTTCCEEE
T ss_pred             cCCCHHHHHHHHHHHHHhC--------CCeEEEECCchHHHHHHHHHHhcCCC-CeEEecccchHHHHHHHHHHhcCCce
Confidence            3344446789999999994        345555 5666777888899999999 9999999999987765544 344444


Q ss_pred             EeeccCCC-C-------cccCHHH---------HHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 021547          161 HFDLLPER-G-------WEVDLEA---------VEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIAD  223 (311)
Q Consensus       161 ~~~~~~~~-~-------~~~d~~~---------l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D  223 (311)
                      ......+. +       ..++.+.         +++....+++.+++.+.+|-.|.+.+   +++|+++|+++|++|++|
T Consensus       133 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~~~d---l~~I~~ia~~~g~~l~vD  209 (462)
T d1c4ka2         133 YLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYN---AHEVVKRIGHLCDYIEFD  209 (462)
T ss_dssp             EECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEEC---HHHHHHHHGGGBSEEEEE
T ss_pred             eeecccccccccCCCChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeeccchhh---HHHHHHHHHHcCCEEEEe
Confidence            43322111 1       1223332         23344456777777777778999999   999999999999999999


Q ss_pred             ccccCCc-cCCCCCCcccccC-----CCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          224 EVYGHLA-FGSTPYIPMGVFG-----SIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       224 ~ay~~~~-~~~~~~~~~~~~~-----~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      ++|+... +.+.-........     ..+..+++.|++|.++.++  .|.++.
T Consensus       210 ~A~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~--~g~ll~  260 (462)
T d1c4ka2         210 SAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQIH  260 (462)
T ss_dssp             CTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEEE
T ss_pred             chhhccccccCcCCcchhhccccccccCCccEEEEecCccccccc--ceEEEE
Confidence            9998632 2221111111111     1223589999999977654  344444

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=2.6e-12  Score=117.95  Aligned_cols=137  Identities=18%  Similarity=0.139  Sum_probs=108.9

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCE---------EEecCCCCcchHHHH
Q 021547           82 CYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAAN---------ILLPRPGWPFYESFA  152 (311)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~---------Vl~~~p~~~~~~~~~  152 (311)
                      .|..+++..+|++++++++        ..+.++++++|++|+.+++.+++++| +.         +......|......+
T Consensus        69 ~Y~~~~~~~~le~~~a~l~--------G~~~~~~~~sGt~A~~~a~~~~~~~g-~~~~~~~~~~~i~~~~~~~~~~~~~~  139 (467)
T d2v1pa1          69 AFSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGAEQIYIPVLIKKR-EQEKGLDRSKMVAFSNYFFDTTQGHS  139 (467)
T ss_dssp             CSSSCHHHHHHHHHHHHHT--------CCSEEEEECSSTTTHHHHHHHHHHHH-HHHHCCCTTTCEEEESSCCHHHHHHH
T ss_pred             hhcCCchHHHHHHHHHHHH--------CCCEEEECCCCHHHHHHHHHHHhhcc-ceEecCCCCcEEEEecccccccHHHH
Confidence            6887788899999999998        45678999999999999999998765 43         444555566667788


Q ss_pred             HHcCcEEEEeeccCC--------CCcccCHHHHHhhcCC----CccEEEEeCCCCC-CccCCCHHHHHHHHHHHHHhCCE
Q 021547          153 KRNHIEVRHFDLLPE--------RGWEVDLEAVEALADE----NTAAIVIINPCNP-CGNVLTYQHLQKIAETARKLGIL  219 (311)
Q Consensus       153 ~~~g~~~~~~~~~~~--------~~~~~d~~~l~~~l~~----~~~~i~i~~p~np-tG~~~~~~~l~~l~~l~~~~~~~  219 (311)
                      ...|..+..++....        ....+|++.+++.+++    .++++++...+|. .|..++.++++++.++|++||++
T Consensus       140 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~gg~~~~~~~l~~i~~ia~~~g~~  219 (467)
T d2v1pa1         140 QINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIP  219 (467)
T ss_dssp             HHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCC
T ss_pred             HHcCCeeeecccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccccccCCHHHHHHHHHHHHHcCCE
Confidence            889999988876432        1356899999997753    4566777777664 56788999999999999999999


Q ss_pred             EEEecccc
Q 021547          220 VIADEVYG  227 (311)
Q Consensus       220 li~D~ay~  227 (311)
                      +|+|+++.
T Consensus       220 l~~D~a~~  227 (467)
T d2v1pa1         220 VVMDSARF  227 (467)
T ss_dssp             EEEECTTH
T ss_pred             EEEechhh
Confidence            99999975

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=8.2e-12  Score=113.12  Aligned_cols=251  Identities=15%  Similarity=0.103  Sum_probs=151.6

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++++|||..|.-... .--.+|.+.+++.++++.......  .....+.+..+++.+.+..+- -..+.++++++|++
T Consensus        37 ~dG~~ylD~~~g~~~~~-lGh~~p~i~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGse  112 (425)
T d1sffa_          37 VEGREYLDFAGGIAVLN-TGHLHPKVVAAVEAQLKKLSHTCF--QVLAYEPYLELCEIMNQKVPG-DFAKKTLLVTTGSE  112 (425)
T ss_dssp             TTCCEEEESSHHHHTCT-TCBTCHHHHHHHHHHTTTCSCCCT--TTEECHHHHHHHHHHHHHSSC-SSCEEEEEESSHHH
T ss_pred             CCCCEEEEcCcCHHhhc-ccCCcHHHHHHHHHHHhhcCCccc--ccccCcHHHHHHHHHHhhhhh-cccceeeeeccccc
Confidence            35899999987721111 112679999999999875322111  111223445556666554321 12357999999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEecCCCCcchHHHHH-HcCcE-------------EEEeec--cCCCCccc----CHHHHHh-
Q 021547          122 AVEIILTVITR-LGAANILLPRPGWPFYESFAK-RNHIE-------------VRHFDL--LPERGWEV----DLEAVEA-  179 (311)
Q Consensus       122 a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~-~~g~~-------------~~~~~~--~~~~~~~~----d~~~l~~-  179 (311)
                      |++.+++.... .++.+|+.....|.+....+. ..|..             ....+.  ........    +.+.+.. 
T Consensus       113 A~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (425)
T d1sffa_         113 AVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKN  192 (425)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHhhhhhcccceEeecCCCcCccccchhhcCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHHh
Confidence            99998887753 344788888888876543333 22211             111111  00111000    1111111 


Q ss_pred             hcCC-CccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCccc
Q 021547          180 LADE-NTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKR  257 (311)
Q Consensus       180 ~l~~-~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~  257 (311)
                      .... +..++++.......|. ..+++.++.|.++|++||+++|.||++.++...|. ......++-.++++   +++|.
T Consensus       193 ~~~~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~g~-~~a~~~~gv~PDi~---~~gK~  268 (425)
T d1sffa_         193 DAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGT-LFAMEQMGVAPDLT---TFAKS  268 (425)
T ss_dssp             TCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTTSCCSEE---EECGG
T ss_pred             cccccceEEEEecCccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCcch-hhHHHhcCCCccce---ecccc
Confidence            1222 3334444444545565 56788899999999999999999999998655443 23334444444444   68999


Q ss_pred             CCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          258 WIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       258 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      ++ .|+++|.+++..        ++++.+... .+.+++.+|++.+++.+.|+
T Consensus       269 l~-gG~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~  312 (425)
T d1sffa_         269 IA-GGFPLAGVTGRA--------EVMDAVAPGGLGGTYAGNPIACVAALEVLK  312 (425)
T ss_dssp             GG-TSSCCEEEEEEH--------HHHTTSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred             cC-CCcceEEEEEcH--------HHHHhhCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            74 589999999864        355555544 44568889999999888765

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.31  E-value=1.3e-11  Score=108.80  Aligned_cols=186  Identities=18%  Similarity=0.182  Sum_probs=128.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEe
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILL  140 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~  140 (311)
                      .+.++.|+++|.+..    .++.++  ...++.+.+.+.+++.++  .+.+.+++++|+|.++++++..++.+| ++|++
T Consensus         9 ~~v~~~V~~am~~~~----~~hr~~--~f~~i~~~~~~~l~~ll~--~~~~~i~~~gsgT~a~e~~~~nl~~~g-~~vlv   79 (348)
T d1iuga_           9 VRLHPKALEALARPQ----LHHRTE--AAREVFLKARGLLREAFR--TEGEVLILTGSGTLAMEALVKNLFAPG-ERVLV   79 (348)
T ss_dssp             CCCCHHHHHHHHSCC----CCTTSH--HHHHHHHHHHHHHHHHHT--CSSEEEEEESCHHHHHHHHHHHHCCTT-CEEEE
T ss_pred             CCCCHHHHHHhcCCC----CCCCCH--HHHHHHHHHHHHHHHHhC--CCCCEEEEeCchHHHHHHHHHhccccc-cccee
Confidence            467888988876432    222222  233333333333333333  344678889999999999999999999 99998


Q ss_pred             cCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHh--
Q 021547          141 PRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKL--  216 (311)
Q Consensus       141 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~--  216 (311)
                      ....+.+  +...++..+..+..++.....  ..++   +...+.+.+.+++++..+.||...+   ++++.++|+++  
T Consensus        80 ~~~G~f~~~~~~~a~~~~~~~~~~~~~~g~--~~~~---~~~~~~~~~~v~~~h~eTstG~~~~---i~~i~~~~~~~~~  151 (348)
T d1iuga_          80 PVYGKFSERFYEIALEAGLVVERLDYPYGD--TPRP---EDVAKEGYAGLLLVHSETSTGALAD---LPALARAFKEKNP  151 (348)
T ss_dssp             EECSHHHHHHHHHHHHTTCEEEEEECCTTC--CCCT---TTSCCSSCSEEEEESEETTTTEECC---HHHHHHHHHHHCT
T ss_pred             ecchHHHHHHHHHHHhcCcccccccccCCC--cccc---ccccccCCCeeEEEecchhhhhhcc---HHHHHHHHHhhhc
Confidence            8877654  456788899888888753322  2333   2334568899999999999999999   88889999887  


Q ss_pred             CCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccC-CCCcceeeEEEeeC
Q 021547          217 GILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRW-IVPGWRFGWLATND  272 (311)
Q Consensus       217 ~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~i~~~~  272 (311)
                      +.++++|.+.+...    .+..+....   -.+++.|..|.+ |.||  +|+++++.
T Consensus       152 ~~l~~vDavss~g~----~~i~~d~~~---iD~~~~~sqK~l~gppG--~~~v~~s~  199 (348)
T d1iuga_         152 EGLVGADMVTSLLV----GEVALEAMG---VDAAASGSQKGLMCPPG--LGFVALSP  199 (348)
T ss_dssp             TCEEEEECTTTBTT----BCCCSGGGT---CSEEEEESSSTTCCCSC--EEEEEECH
T ss_pred             cceeechhhhcccc----ccccccccc---CCEEEeccccceecCCc--eeeeeech
Confidence            47899999887522    223333322   238999999998 6666  57777753

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.29  E-value=7.5e-11  Score=105.95  Aligned_cols=247  Identities=16%  Similarity=0.116  Sum_probs=144.9

Q ss_pred             CCCCCeeecCCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFR-TAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      .+++.+|||..|.-..  .++ .+|.+.++++++++...   |....-.....+.+++.+....    ..+.+.++.+++
T Consensus        36 ~dG~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~q~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~sgs  106 (404)
T d1z7da1          36 VNDKRYYDFLSAYSSV--NQGHCHPNILNAMINQAKNLT---ICSRAFFSVPLGICERYLTNLL----GYDKVLMMNTGA  106 (404)
T ss_dssp             TTCCEEEESSHHHHTT--TTCBTCHHHHHHHHHHHTTCS---CCCTTSEEHHHHHHHHHHHHHH----TCSEEEEESSHH
T ss_pred             CCCCEEEEccccHHHH--hhhcCcHHHHHHHHHHHHhCC---CcccccchHHHHHHHHhhhhcc----ccceeeeecccc
Confidence            3588999998762111  122 57999999999987532   2211112222333344343322    346789999999


Q ss_pred             HHHHHHHHHHhc---------CCCCEEEecCCCCcchHHHHHHcC-cE---EEEeeccCCC--CcccCHHHHHhhcCCCc
Q 021547          121 EAVEIILTVITR---------LGAANILLPRPGWPFYESFAKRNH-IE---VRHFDLLPER--GWEVDLEAVEALADENT  185 (311)
Q Consensus       121 ~a~~~~~~~l~~---------~g~d~Vl~~~p~~~~~~~~~~~~g-~~---~~~~~~~~~~--~~~~d~~~l~~~l~~~~  185 (311)
                      ++...+++....         .+..+++.....|........... ..   ....+..+..  ...-+.+.++..+.++.
T Consensus       107 ~a~~~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  186 (404)
T d1z7da1         107 EANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDPN  186 (404)
T ss_dssp             HHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECTTCHHHHHHHHTSTT
T ss_pred             chHHHHHHHHHHHHhhcccccccccccccccccCCCCcccccccccccccccCCCCCCccccccccchHHHHHHHhcCCC
Confidence            999988776531         111467777777765432221111 00   0000000000  00125667777666654


Q ss_pred             cEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcc
Q 021547          186 AAIVIINP-CNPCGNV-LTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGW  263 (311)
Q Consensus       186 ~~i~i~~p-~nptG~~-~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~  263 (311)
                      .+.++.-| ....|.. .+++-+++|.++|++||+++|+||++.++...|. ...+..++-.++++   +++|.++..+.
T Consensus       187 iAavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~-~~~~e~~gv~PDiv---t~gK~l~gG~~  262 (404)
T d1z7da1         187 VCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK-LLCVHHYNVKPDVI---LLGKALSGGHY  262 (404)
T ss_dssp             EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGTCCCSEE---EECGGGGTTSS
T ss_pred             EEEEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCcccc-cccccccCCCCCEE---EEcccccCCCC
Confidence            45455544 5566764 4666699999999999999999999988755443 33445555455555   88999765458


Q ss_pred             eeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCchhHHHHHhhhh
Q 021547          264 RFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       264 r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .+|.+++..        ++.+.+... .+.+++.+|++.+++.+.|+
T Consensus       263 p~~~v~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~  301 (404)
T d1z7da1         263 PISAVLAND--------DIMLVIKPGEHGSTYGGNPLAASICVEALN  301 (404)
T ss_dssp             CCEEEEECH--------HHHTTCCTTCCCCTTTTCHHHHHHHHHHHH
T ss_pred             CcccccchH--------HHHccCCCCCcCcCCCCCcchhhhhhhhhh
Confidence            999998853        355555544 34567889999999888764

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.26  E-value=4.9e-10  Score=101.22  Aligned_cols=251  Identities=14%  Similarity=0.053  Sum_probs=151.1

Q ss_pred             CCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           42 NDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        42 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      .+++.+|||..|.-.... --.+|.+.+++.+++.......... ...++ ...+++.+....+  ...+.+++++++++
T Consensus        40 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~Ai~~q~~~~~~~~~~~-~~~~~-~~~l~~~l~~~~~--~~~~~v~f~~sGse  114 (429)
T d1s0aa_          40 SDGRRLVDGMSSWWAAIH-GYNHPQLNAAMKSQIDAMSHVMFGG-ITHAP-AIELCRKLVAMTP--QPLECVFLADSGSV  114 (429)
T ss_dssp             TTSCEEEESSTTTTTCTT-CBSCHHHHHHHHHHHHHCSCCCCSS-EECHH-HHHHHHHHHHHSC--TTCCEEEEESSHHH
T ss_pred             CCCCEEEECcccHHHHhh-cCCcHHHHHHHHHHHHhcCCcccCC-ccchH-HHHHHHHHHhhhc--cCcceeeecccccc
Confidence            358899999877322111 2268999999999887532111111 11122 3333444433332  24567999999999


Q ss_pred             HHHHHHHHHhc------CCCCEEEecCCCCcchHH-HHHHcC-------------cEEEEeeccC-CCCc---ccCHHHH
Q 021547          122 AVEIILTVITR------LGAANILLPRPGWPFYES-FAKRNH-------------IEVRHFDLLP-ERGW---EVDLEAV  177 (311)
Q Consensus       122 a~~~~~~~l~~------~g~d~Vl~~~p~~~~~~~-~~~~~g-------------~~~~~~~~~~-~~~~---~~d~~~l  177 (311)
                      |++.+++....      .+..+|+.....|.+... .....+             ......+... ....   .-+.+.+
T Consensus       115 A~e~A~k~ar~~~~~~g~~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (429)
T d1s0aa_         115 AVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGF  194 (429)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHH
T ss_pred             chhhhhhhhhheeecccccccEEEEecCCccccchhhhhhcCCccccccccCccccccccccccccccccccchhhhhhh
Confidence            99988876631      222578888777765322 222211             1112222111 1111   1234444


Q ss_pred             HhhcC---CCccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEe
Q 021547          178 EALAD---ENTAAIVIINP-CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLG  252 (311)
Q Consensus       178 ~~~l~---~~~~~i~i~~p-~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~  252 (311)
                      ++.+.   ++..++++... ++..|. ..+++-+++|.++|++||+++|.||++.++...|. ......++-.++++   
T Consensus       195 ~~~~~~~~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~-~~~~~~~~v~PDi~---  270 (429)
T d1s0aa_         195 ARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGK-LFACEHAEIAPDIL---  270 (429)
T ss_dssp             HHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGGTCCCSEE---
T ss_pred             hhhhhhcCCccceeeecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhcccccccccc-ccccccceeccccc---
Confidence            44332   34444444433 355555 56889999999999999999999999999855553 33444455455556   


Q ss_pred             cCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh------hccccCCCchhHHHHHhhhh
Q 021547          253 SISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC------LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       253 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l~  309 (311)
                      .++|.++..+..+|.+++..        ++.+.+...      ...+++.++++.+++.+.|+
T Consensus       271 ~~gK~l~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~  325 (429)
T d1s0aa_         271 CLGKALTGGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAAANASLA  325 (429)
T ss_dssp             EECGGGGTSSSCCEEEEECH--------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHH
T ss_pred             ccccccccccccccchhhHH--------HHHhccCCCCCcceeecCCCCCCcccchhhhcccc
Confidence            67898766668999998853        466666542      23467889999998888765

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.24  E-value=8.7e-11  Score=104.06  Aligned_cols=187  Identities=16%  Similarity=0.122  Sum_probs=127.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEE
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANI  138 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~V  138 (311)
                      .+.++.|+++|...    ..++++.  ..-+.+.|+.++++++    .+ +...|++++|+|.++++++..+..+| +++
T Consensus        27 ~~v~~~Vl~am~~~----~~~hr~~ef~~i~~~~r~~l~~ll~----~~-~~~~i~~~g~gT~~~~~~~~~~~~~~-~~~   96 (377)
T d1vjoa_          27 SNAHPSVLQAMNVS----PVGHLDPAFLALMDEIQSLLRYVWQ----TE-NPLTIAVSGTGTAAMEATIANAVEPG-DVV   96 (377)
T ss_dssp             CCCCHHHHHHHSSC----CCCTTSHHHHHHHHHHHHHHHHHHT----CC-CSCEEEESSCHHHHHHHHHHHHCCTT-CEE
T ss_pred             CCCCHHHHHHhCcC----CCCCCCHHHHHHHHHHHHHHHHHhC----CC-CCeEEEEcCcHHHHHHHHHHhccccc-ccc
Confidence            46788888876422    2223332  1124556666666663    21 33477888889999999999999999 999


Q ss_pred             EecCCCCcch--HHHHHHcCcEEEEeeccCCCCcccCHHHHHh-hcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547          139 LLPRPGWPFY--ESFAKRNHIEVRHFDLLPERGWEVDLEAVEA-LADENTAAIVIINPCNPCGNVLTYQHLQKIAETARK  215 (311)
Q Consensus       139 l~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~  215 (311)
                      ++....+...  ....+..+.....+....  +...+.+..+. ..+.+++.+.+++.+|.||...+   ++++.++|++
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~---i~~i~~~~~~  171 (377)
T d1vjoa_          97 LIGVAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCRE  171 (377)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             ceeeechhhhhhhhhhhhhcccccccccCC--CCcccchhhhhhhhcCcceeeeeeeeeccceeeec---hhhhhhhhhh
Confidence            8887777643  345666666666665432  22344444444 45568899999999999999999   9999999999


Q ss_pred             hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          216 LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       216 ~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      +|.++++|.+++...    -...+..++   ..+++.|.+|.++.|+ .+|.++.
T Consensus       172 ~g~~~~vDa~~~~g~----~~~~~~~~~---~d~~~~s~~K~~~gp~-g~~~~~~  218 (377)
T d1vjoa_         172 FGTLLLVDTVTSLGG----VPIFLDAWG---VDLAYSCSQKGLGCSP-GASPFTM  218 (377)
T ss_dssp             HTCEEEEECTTTTTT----SCCCTTTTT---CSEEECCSSSTTCSCS-SCEEEEE
T ss_pred             ccceEEEecchhhhh----hhhcccccc---cceeeecccccccCCC-EEEEecc
Confidence            999999999998522    222333332   3488999999865554 3455544

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.22  E-value=7.9e-11  Score=104.88  Aligned_cols=187  Identities=11%  Similarity=0.128  Sum_probs=127.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEE
Q 021547           61 FRTAAVAEDAIVDSVRSSMFNCYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANI  138 (311)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~V  138 (311)
                      ...++.|+++|...    ..++++.  ..-+.++|+.++++++    .+ +.+.|+++.|+|.++++++..+..+| ++|
T Consensus        26 ~~~~~~V~~Am~~~----~~~hr~~ef~~i~~~~r~~L~~ll~----~~-~~~~i~~~gsgT~a~ea~~~~l~~~~-~~v   95 (388)
T d2ch1a1          26 SNCSKRVLTAMTNT----VLSNFHAELFRTMDEVKDGLRYIFQ----TE-NRATMCVSGSAHAGMEAMLSNLLEEG-DRV   95 (388)
T ss_dssp             CCCCHHHHHHTTSC----CCCTTCHHHHHHHHHHHHHHHHHHT----CC-CSCEEEESSCHHHHHHHHHHHHCCTT-CEE
T ss_pred             CCCCHHHHHHhCcC----CCCCCCHHHHHHHHHHHHHHHHHhC----CC-CCeEEEEcCcHHHHHHHHHHHhcccc-ccc
Confidence            35678888876422    2233432  1123455666666663    21 23346667889999999999999999 999


Q ss_pred             EecCCCCcchH--HHHHHcCcEEEEeeccCCCCcccCHHHHHhhc-CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 021547          139 LLPRPGWPFYE--SFAKRNHIEVRHFDLLPERGWEVDLEAVEALA-DENTAAIVIINPCNPCGNVLTYQHLQKIAETARK  215 (311)
Q Consensus       139 l~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~  215 (311)
                      ++....+.+..  ..++..+...+.+...+  +...+.+..+... ..+++.+++++.+|.||...+   ++++.++|++
T Consensus        96 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~---~~~i~~~~~~  170 (388)
T d2ch1a1          96 LIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQ  170 (388)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             cccccccccccchhhhhhhccccccccccc--ccccchhhhhhhhccCCcceeeeeecccccccccc---hhhhcchhcc
Confidence            98877776543  45677788877776543  3345666665544 458899999999999999999   8889999999


Q ss_pred             hCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEEe
Q 021547          216 LGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLAT  270 (311)
Q Consensus       216 ~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~~  270 (311)
                      +|.++++|.+++...    .+..+..+   +-.+++.|..|.++.|+ .+|.++.
T Consensus       171 ~~~~~~vD~~ss~g~----~pid~~~~---~~d~~~~s~~K~~~gp~-G~g~~~~  217 (388)
T d2ch1a1         171 HDCLLIVDAVASLCG----VPFYMDKW---EIDAVYTGAQKVLGAPP-GITPISI  217 (388)
T ss_dssp             TTCEEEEECTTTBTT----BCCCTTTT---TCCEEECCCC-CCCCCS-SCEEEEE
T ss_pred             ccceeeeeeeecccc----cccchhcc---CceEEEEccccccCCCC-eEEEEec
Confidence            999999999998632    22233322   23488899999875542 3455554

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.22  E-value=1e-10  Score=103.27  Aligned_cols=233  Identities=12%  Similarity=0.026  Sum_probs=149.2

Q ss_pred             hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-----C-CCCCCCcHHHHHHHHH
Q 021547           25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFN-----C-YAPMFGLPLARRAVAE   98 (311)
Q Consensus        25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~-----~-Y~~~~g~~~lr~~ia~   98 (311)
                      ..+|.++++.-..+     ...-|+|--..      -..++.+++++...+.+-..-     + |....-+.++++...+
T Consensus        11 D~ei~~~i~~e~~r-----q~~~i~LiaSE------N~~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~   79 (416)
T d1dfoa_          11 DAELWQAMEQEKVR-----QEEHIELIASE------NYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAID   79 (416)
T ss_dssp             CHHHHHHHHHHHHH-----HHHSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH-----HHcCceEecCc------ccCCHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHH
Confidence            44666666643222     35668886554      235688888887766421111     1 2222233455444444


Q ss_pred             HHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH-----HHHHcCcEEEEeeccCCCCcccC
Q 021547           99 YLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYES-----FAKRNHIEVRHFDLLPERGWEVD  173 (311)
Q Consensus        99 ~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~d  173 (311)
                      ..++.||.  ..-+|. ..+++.|..+++.+|++|| |+|+..+..+.+...     ......++.+.++++.  +..+|
T Consensus        80 ra~~lF~a--~~anVq-p~SGs~AN~av~~All~pG-D~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~--~~~ID  153 (416)
T d1dfoa_          80 RAKELFGA--DYANVQ-PHSGSQANFAVYTALLEPG-DTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDA--TGHID  153 (416)
T ss_dssp             HHHHHHTC--SEEECC-CSSHHHHHHHHHHHHCCTT-CEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCS--SSSBC
T ss_pred             HHHHHhCC--Ccceee-cccCccHHHHHHHHhcCCC-CeeeeccccccccccccccccccCceEEEEecccCC--ccCcc
Confidence            44444442  222333 3566889999999999999 999998777765322     1222335667776643  45699


Q ss_pred             HHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccC-CccCCCCCCcccccCCCCCeEEE
Q 021547          174 LEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGH-LAFGSTPYIPMGVFGSIVPVITL  251 (311)
Q Consensus       174 ~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~i  251 (311)
                      .+++++... .++++|++....+|-  .++   ++++.++|++.|.++++|.+|.. |.-+|.-+.|+...     .|+.
T Consensus       154 yd~l~~~a~~~kPklIi~G~S~y~r--~~d---~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~a-----Dvvt  223 (416)
T d1dfoa_         154 YADLEKQAKEHKPKMIIGGFSAYSG--VVD---WAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHA-----HVVT  223 (416)
T ss_dssp             HHHHHHHHHHHCCSEEEEECSSCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTTS-----SEEE
T ss_pred             HHHHHHHHHHhccceEEeccccccc--ccC---HHHHHHHHHhcCceEEcchhhhhcceeccccCCccccc-----ceee
Confidence            999999654 588888877655553  445   89999999999999999999974 55455444454432     2899


Q ss_pred             ecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc
Q 021547          252 GSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG  291 (311)
Q Consensus       252 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  291 (311)
                      +|.+|+  ++|-|-|.|+.....     .++.+++.....
T Consensus       224 ~tThKt--lrGPrggiI~~~~~~-----~~~~~~i~~avf  256 (416)
T d1dfoa_         224 TTTHKT--LAGPRGGLILAKGGS-----EELYKKLNSAVF  256 (416)
T ss_dssp             EESSST--TCCCSCEEEEESSCC-----HHHHHHHHHHHT
T ss_pred             eehhhc--ccCCCceEEEeccch-----HhHHHHHHhhhC
Confidence            999998  567788998885432     135566655543

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.20  E-value=1.9e-10  Score=101.09  Aligned_cols=231  Identities=13%  Similarity=0.037  Sum_probs=149.6

Q ss_pred             hhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCcHHHHHHHHH
Q 021547           25 VAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC------YAPMFGLPLARRAVAE   98 (311)
Q Consensus        25 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~   98 (311)
                      ..+|.++++.-.++     ...-|+|--..      -..+|.+++++...+.+-..-+      |....-+.++++...+
T Consensus         8 D~ei~~~i~~e~~r-----q~~~l~LiaSE------N~~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~   76 (405)
T d1kl1a_           8 DPQVFAAIEQERKR-----QHAKIELIASE------NFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARE   76 (405)
T ss_dssp             CHHHHHHHHHHHHH-----HHHSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH-----HHcCceEeccC------CcCCHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHH
Confidence            45666666543222     35668876654      2356888888877664321111      3333334455544445


Q ss_pred             HHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH-----HHHHHcCcEEEEeeccCCCCcccC
Q 021547           99 YLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE-----SFAKRNHIEVRHFDLLPERGWEVD  173 (311)
Q Consensus        99 ~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~d  173 (311)
                      ..++.|+.  ..-+|- ..+++.|..+++.+|++|| |+|+..++...+..     .......++.+.+++++ +++.+|
T Consensus        77 ra~~lF~a--~~anVq-p~SGs~An~av~~all~pG-D~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~-~~~~ID  151 (405)
T d1kl1a_          77 RAKQLFGA--EHANVQ-PHSGAQANMAVYFTVLEHG-DTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVID  151 (405)
T ss_dssp             HHHHHHCC--SEEECC-CSSHHHHHHHHHHHHCCTT-CEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCT-TTCSBC
T ss_pred             HHHHHhCC--Ccceee-ccCchHHHHHHHHHhcCCC-CEEEEeecccccccccCccccccceEEEEEEeccch-hccccc
Confidence            55554442  112333 4556779999999999999 99998865554322     11222346777777654 456899


Q ss_pred             HHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCCCCCeEEE
Q 021547          174 LEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGSIVPVITL  251 (311)
Q Consensus       174 ~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~i  251 (311)
                      .+++++..+. ++++|++....+|.-  ++   ++++.++|++.|.+++.|.+|. +|.-.|.-+.|+..-     .|+.
T Consensus       152 ~d~l~~~a~~~kPklIi~G~S~y~r~--~d---~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~~~a-----Dvvt  221 (405)
T d1kl1a_         152 YDDVREKARLHRPKLIVAAASAYPRI--ID---FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYA-----HFVT  221 (405)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSSCCSC--CC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTC-----SEEE
T ss_pred             HHHHHHHHHhhCcceEEecccccccc--cC---hHHHHHHHhhhCCEEecchhhHhhhhhhhhcCChhhhh-----hhee
Confidence            9999997654 788887776666553  34   8999999999999999999997 466666555555322     1788


Q ss_pred             ecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhhhc
Q 021547          252 GSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKACLG  291 (311)
Q Consensus       252 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  291 (311)
                      +|.+|+  ++|-|-|.|+..+        ++.+++.....
T Consensus       222 ~tThKt--lrGPrgg~I~~~~--------~~~~~i~~avf  251 (405)
T d1kl1a_         222 TTTHKT--LRGPRGGMILCQE--------QFAKQIDKAIF  251 (405)
T ss_dssp             EESSST--TCCCSCEEEEECH--------HHHHHHHHHHT
T ss_pred             cccccc--ccCCCCceEEecc--------hhHHHHHhhhC
Confidence            899998  5777889888743        35666665543

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=99.16  E-value=2.9e-10  Score=102.89  Aligned_cols=250  Identities=15%  Similarity=0.065  Sum_probs=148.4

Q ss_pred             cCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChH
Q 021547           41 KNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCM  120 (311)
Q Consensus        41 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~  120 (311)
                      ..+++.+|||..|.-... .--.+|.+.+++.++++....   .......+.+..+++.|.+....  ..+.++++++|+
T Consensus        37 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~---~~~~~~~~~~~~la~~L~~~~~~--~~~~v~f~~sGs  110 (431)
T d1zoda1          37 DADGRAILDFTSGQMSAV-LGHCHPEIVSVIGEYAGKLDH---LFSEMLSRPVVDLATRLANITPP--GLDRALLLSTGA  110 (431)
T ss_dssp             CTTCCEEEETTHHHHTCT-TCBTCHHHHHHHHHHHHHCCC---CCTTCCCHHHHHHHHHHHHHSCT--TCCEEEEESCHH
T ss_pred             ECCCCEEEEcccCHHhhh-hcCCCHHHHHHHHHHHhhccc---cccccccHHHHHHHHHHHHhCCc--ccceeeeccccc
Confidence            346899999986621111 122579999999999875321   11111223344566655543321  347899999999


Q ss_pred             HHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcCc------------EEEEeeccCCC-------CcccC---HHHH
Q 021547          121 EAVEIILTVITR-LGAANILLPRPGWPFYESFAKRNHI------------EVRHFDLLPER-------GWEVD---LEAV  177 (311)
Q Consensus       121 ~a~~~~~~~l~~-~g~d~Vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~~~-------~~~~d---~~~l  177 (311)
                      +|++.+++.... .|+++|+.....|.+....+...+.            ....++.....       .....   ++.+
T Consensus       111 eA~e~Alk~Ar~~t~r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (431)
T d1zoda1         111 ESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYA  190 (431)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHH
T ss_pred             chHHHHHHHHHHhcCCcceeecccccccccchhhcccccccccccCCcccCceeeeeecccccccccccchhhhhhHHHH
Confidence            999999887642 3447888888888765443332221            11222211100       00011   2222


Q ss_pred             Hhhc---CCCccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEe
Q 021547          178 EALA---DENTAAIVIINP-CNPCGN-VLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLG  252 (311)
Q Consensus       178 ~~~l---~~~~~~i~i~~p-~nptG~-~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~  252 (311)
                      ...+   .++..+.++.-| ....|. ..+++-+++|.++|++||+++|.||++.++...|..+ ....++-.++++   
T Consensus       191 ~~~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG~~~-~~~~~gv~PDi~---  266 (431)
T d1zoda1         191 FDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMF-ACQRDGVTPDIL---  266 (431)
T ss_dssp             HHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---
T ss_pred             HHHHHHhccccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEecccccccccccccc-ccccCCCCcchh---
Confidence            2221   233344444444 444455 4688889999999999999999999999876555432 333344444555   


Q ss_pred             cCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh---hccccCCCchhHHHHHhhhh
Q 021547          253 SISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC---LGVRSGPSTLIQVCEMFLLV  309 (311)
Q Consensus       253 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~  309 (311)
                      +++|.+ ..|..++.+++..        ++.......   .+.+.+.+|++.+++.+.|+
T Consensus       267 ~~gK~l-~gG~p~~av~~~~--------~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~l~  317 (431)
T d1zoda1         267 TLSKTL-GAGLPLAAIVTSA--------AIEERAHELGYLFYTTHVSDPLPAAVGLRVLD  317 (431)
T ss_dssp             EECHHH-HTTSSCEEEEECH--------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             cccccc-ccccccceeeeee--------cchhhhhcccccccCCCCCCcchHHHHHHHHH
Confidence            788985 4678888888753        244444332   33467888888888777653

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.14  E-value=1.3e-09  Score=97.69  Aligned_cols=224  Identities=13%  Similarity=0.032  Sum_probs=149.1

Q ss_pred             hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHH
Q 021547           24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF------NCYAPMFGLPLARRAVA   97 (311)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia   97 (311)
                      ...+|.+++..-..+     ...-|+|--..      -..++.+++++...+.+-..      ..|....-+.+++....
T Consensus        15 ~D~ei~~~i~~e~~r-----q~~~l~LIaSE------N~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~   83 (470)
T d1rv3a_          15 SDAEVYDIIKKESNR-----QRVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQ   83 (470)
T ss_dssp             HCHHHHHHHHHHHHH-----HHSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHH
T ss_pred             hCHHHHHHHHHHHHH-----HHcCceEecCC------CcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHH
Confidence            345677776643222     35567777655      24578888888776642111      12333344456666666


Q ss_pred             HHHhhcCCCCCCCCCEEE-eCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHH----------HHHHcCcEEEEeeccC
Q 021547           98 EYLNRDLPYKLSADDIYI-TLGCMEAVEIILTVITRLGAANILLPRPGWPFYES----------FAKRNHIEVRHFDLLP  166 (311)
Q Consensus        98 ~~l~~~~g~~~~~~~v~~-t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~----------~~~~~g~~~~~~~~~~  166 (311)
                      +...+.|+.+.....+=+ ..+++.|..+++.+|++|| |+|+..+....+...          .+.....+...+++++
T Consensus        84 ~ra~~lF~~~~~~~~anVqp~SGs~An~av~~all~pg-D~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v~~  162 (470)
T d1rv3a_          84 KRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPH-GRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP  162 (470)
T ss_dssp             HHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTT-CEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT
T ss_pred             HHHHHHhCCChhhccccccccCCccHHHHHHHHhcCCC-CeEeeeccccCCcccccccccCCCcccccceeEeeEEEEec
Confidence            666666765433222322 4667889999999999999 999987644433211          1112235677777754


Q ss_pred             CCCcccCHHHHHhhcC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccCC
Q 021547          167 ERGWEVDLEAVEALAD-ENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFGS  244 (311)
Q Consensus       167 ~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~~  244 (311)
                       +++.+|.+++++..+ .++++|++....+|-  .++   ++++.++|.+.|.+|++|.+|. +|.-+|.-+.|+...  
T Consensus       163 -~~~~IDyd~l~~~a~~~kPklIi~G~S~y~r--~~d---~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl~~a--  234 (470)
T d1rv3a_         163 -DTGYIDYDRLEENARLFHPKLIIAGTSCYSR--NLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHC--  234 (470)
T ss_dssp             -TTCSBCHHHHHHHHHHHCCSEEEECCSSCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTC--
T ss_pred             -ccCcccHHHHHHHHHhhCcceEeechhhccc--cCC---HHHHHHHHhccCCeEEecchhhhhhccccccCChhhee--
Confidence             456799999999665 488888877766665  334   8999999999999999999997 455555555565432  


Q ss_pred             CCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          245 IVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       245 ~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                         .|+.+|.+|+  ++|-|-|.|+...
T Consensus       235 ---Dvvt~tTHKt--lrGPrgGiI~~~~  257 (470)
T d1rv3a_         235 ---HVVTTTTHKT--LRGCRAGMIFYRR  257 (470)
T ss_dssp             ---SEEEEESSGG--GCCCSCEEEEEEC
T ss_pred             ---eeeeeehhhh--ccCCcceEEEEcc
Confidence               2899999998  5788889988765

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.14  E-value=7.3e-10  Score=98.97  Aligned_cols=223  Identities=10%  Similarity=-0.015  Sum_probs=134.4

Q ss_pred             hhhhHHHHHHHHHhhhccCCCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHH
Q 021547           24 EVAAFRYAIVSLMESVDKNDPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMF------NCYAPMFGLPLARRAVA   97 (311)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia   97 (311)
                      ...+|.+++..-.++     ...-|+|--..      -..++.+++++...+.+-..      ..|....-+.+++....
T Consensus        11 ~D~ei~~~i~~e~~r-----q~~~l~LiaSE------N~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~   79 (463)
T d2a7va1          11 SDPEMWELLQREKDR-----QCRGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQ   79 (463)
T ss_dssp             HCHHHHHHHHHHHHH-----HHHSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHH
T ss_pred             hCHHHHHHHHHHHHH-----HhcCeeEeccC------CcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHH
Confidence            345566666543222     34557776554      24578888888776642111      12333444566766656


Q ss_pred             HHHhhcCCCCCCCC--CEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHH--------HHHcC--cEEEEeecc
Q 021547           98 EYLNRDLPYKLSAD--DIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESF--------AKRNH--IEVRHFDLL  165 (311)
Q Consensus        98 ~~l~~~~g~~~~~~--~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~--------~~~~g--~~~~~~~~~  165 (311)
                      +..++.|+......  +|- ..+++.|+.+++.+|++|| |+|+..++...++...        ....|  .+...+.++
T Consensus        80 ~ra~~lF~~~~a~w~vNVq-p~SGs~An~av~~all~pg-D~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y~~d  157 (463)
T d2a7va1          80 RRALEAFDLDPAQWGVNVQ-PYSGSPANLAVYTALLQPH-DRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN  157 (463)
T ss_dssp             HHHHHHTTCCTTTEEEECC-CSSHHHHHHHHHHHHCCSC-EECCC-------------------------------CCBC
T ss_pred             HHHHHHhCCCchhccCCcc-ccccHHHHHHHHHHHcCCC-ceEEeeccCcCcccccccccccccccceeeEeeeeeeecc
Confidence            66666666443221  333 3456779999999999999 9999877666544311        11122  234444443


Q ss_pred             CCCCcccCHHHHHhhcCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-CCccCCCCCCcccccC
Q 021547          166 PERGWEVDLEAVEALADE-NTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYG-HLAFGSTPYIPMGVFG  243 (311)
Q Consensus       166 ~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~-~~~~~~~~~~~~~~~~  243 (311)
                      + .+..+|.+++++.... ++++|++....+|--  ++   ++++.++|++-|.++++|.+|- +|.-+|.-+.|+..- 
T Consensus       158 ~-~~~~IDyd~~~~~a~~~kPklIi~G~S~y~r~--~d---~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP~~~a-  230 (463)
T d2a7va1         158 P-KTGLIDYNQLALTARLFRPRLIIAGTSAYARL--ID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHA-  230 (463)
T ss_dssp             T-TTCSBCHHHHHHHHHHHCCSEEEECCSSCCSC--CC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTC-
T ss_pred             C-CCCcCcHHHHHHHHhhcCCceEEecccccccc--cC---HHHHHHHhhcccceEEechhhhhHHhhhhhhcChhhhh-
Confidence            2 4567999999997654 888888777666653  34   8999999999999999999996 466566555555432 


Q ss_pred             CCCCeEEEecCcccCCCCcceeeEEEeeC
Q 021547          244 SIVPVITLGSISKRWIVPGWRFGWLATND  272 (311)
Q Consensus       244 ~~~~~i~i~s~sK~~~~~G~r~G~i~~~~  272 (311)
                          .|+.+|.+|+  ++|-|-|.|++.+
T Consensus       231 ----Dvvt~tTHKT--lrGPrgGiIl~~~  253 (463)
T d2a7va1         231 ----DIVTTTTHKT--LRGARSGLIFYRK  253 (463)
T ss_dssp             ----SEEEEESSGG--GCSCSCEEEEEEC
T ss_pred             ----hhhhchhhhh--hcCCCceEEEEcc
Confidence                1888999998  5788989988765

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.03  E-value=2.2e-10  Score=101.02  Aligned_cols=198  Identities=9%  Similarity=-0.064  Sum_probs=126.8

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----FNCYAP-MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      +..||+-|-      ...|+.|+++|.+.+-...     ....++ +.-..++.+.+.+.+++.++.+ +...|++++|+
T Consensus         3 ~~~~F~pGP------~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~-~~~~i~~~~gs   75 (361)
T d2c0ra1           3 RAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNP-TGYKVLFIQGG   75 (361)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCC-SSEEEEEESSH
T ss_pred             CCcccCCCC------cCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCC-CCCEEEEECCC
Confidence            457887763      4678999999998764210     000111 1223344455555555555532 33467776666


Q ss_pred             -HHHHHHHHHHHhcCCCCEEEecCCCCc--chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCC
Q 021547          120 -MEAVEIILTVITRLGAANILLPRPGWP--FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNP  196 (311)
Q Consensus       120 -~~a~~~~~~~l~~~g~d~Vl~~~p~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~np  196 (311)
                       +.++.++...+..+| +++++......  .+...++..|..+..+.....  ...+++.+++.+..++..    ..+|.
T Consensus        76 ~t~~~ea~~~~l~~~~-~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~v~~~  148 (361)
T d2c0ra1          76 ASTQFAMIPMNFLKEG-QTANYVMTGSWASKALKEAKLIGDTHVAASSEAS--NYMTLPKLQEIQLQDNAA----YLHLT  148 (361)
T ss_dssp             HHHHHHHHHHHHCCTT-CEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGG--TTCSCCCGGGCCCCTTEE----EEEEE
T ss_pred             chHHHHHHHhccccCC-CceEEEeechhhhhhhhhhhhcCceeeeeccccc--cccchhhhhhhcccCcce----EEEEe
Confidence             455577777888888 88876554443  345678889988888876432  346777777766655422    23567


Q ss_pred             CccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          197 CGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       197 tG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      ||...+   +.++.++|+++|+++++|.+.+.    +..+..+..++     +.+.|.+|.++.+|.-.+++.
T Consensus       149 tg~~~~---~~~i~~~~~~~~al~~vDavss~----g~~~id~~~~d-----i~~~s~~k~~~~~~~~~~~~~  209 (361)
T d2c0ra1         149 SNETIE---GAQFKAFPDTGSVPLIGDMSSDI----LSRPFDLNQFG-----LVYAGAQKNLGPSGVTVVIVR  209 (361)
T ss_dssp             SEETTT---TEECSSCCCCTTSCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCSSCEEEEEE
T ss_pred             ccccee---cceEEEeeccCCceEEEEeeccc----cccccccccce-----eEEEecccccccccCcEEEEE
Confidence            888887   67788899999999999999986    22333444332     666788999988875444443

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.91  E-value=6.3e-09  Score=94.69  Aligned_cols=245  Identities=13%  Similarity=-0.010  Sum_probs=137.3

Q ss_pred             CCCCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCCh
Q 021547           43 DPRPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM---FNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGC  119 (311)
Q Consensus        43 ~~~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~  119 (311)
                      +++.+|||..|.-.... --.+|.+.+++.+++....   ...+.. .....+.+.+++.+....+  -..+.++++++|
T Consensus        51 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~~~~~~-~~~~~~a~~lae~l~~~~~--~~~~~v~f~~sG  126 (461)
T d1ohwa_          51 DGNRMLDLYSQISSIPI-GYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMACG  126 (461)
T ss_dssp             TSCEEEESSHHHHTCSS-CBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESSH
T ss_pred             CCCEEEEcccCHHHHhh-cCCcHHHHHHHHHHHhhhhhcccccccc-cchHHHHHHHHHHHHhhhc--cCcceeeeecch
Confidence            47888998755211111 1247889999987765211   101111 1223455667777654332  245689999999


Q ss_pred             HHHHHHHHHHHhc---------------------------CCCCEEEecCCCCcchHH-HHHHcCcE-----------EE
Q 021547          120 MEAVEIILTVITR---------------------------LGAANILLPRPGWPFYES-FAKRNHIE-----------VR  160 (311)
Q Consensus       120 ~~a~~~~~~~l~~---------------------------~g~d~Vl~~~p~~~~~~~-~~~~~g~~-----------~~  160 (311)
                      ++|++.+++....                           .+..+|+....+|.+... .....|-+           ..
T Consensus       127 seAve~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~~  206 (461)
T d1ohwa_         127 SCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWP  206 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHHTTCCCCCCC
T ss_pred             hhhhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCcccccccccccCCc
Confidence            9999998876521                           222578888888876422 22222211           01


Q ss_pred             EeeccCC-CCc-----------ccCHHHHHhhcC------CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHhCCEEE
Q 021547          161 HFDLLPE-RGW-----------EVDLEAVEALAD------ENTAAIVIINPCNPCGN-VLTYQHLQKIAETARKLGILVI  221 (311)
Q Consensus       161 ~~~~~~~-~~~-----------~~d~~~l~~~l~------~~~~~i~i~~p~nptG~-~~~~~~l~~l~~l~~~~~~~li  221 (311)
                      ..+.... ...           ....+++++.+.      .++.++++...+...|. ..+++-+++|.++|++||+++|
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gillI  286 (461)
T d1ohwa_         207 IAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFL  286 (461)
T ss_dssp             EECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             ccccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHHHhhCccee
Confidence            1111000 000           012344444432      23445555555555564 5678889999999999999999


Q ss_pred             EeccccCCccCCCCCCcccccCC--CCCeEEEecCcccCCCCcceeeEEEeeCCCCccchhhHHHHHhhh-hccccCCCc
Q 021547          222 ADEVYGHLAFGSTPYIPMGVFGS--IVPVITLGSISKRWIVPGWRFGWLATNDPNGVLQKSGIVGSIKAC-LGVRSGPST  298 (311)
Q Consensus       222 ~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  298 (311)
                      .||++.++...|. +.....+.-  .++++   +++|.++.     |+.....         .+...... ...++..++
T Consensus       287 ~DEV~tG~gRtG~-~~~~e~~gi~~~PDiv---~~gK~l~~-----g~~~~~~---------~~~~~~~~~~~~T~~g~p  348 (461)
T d1ohwa_         287 VDEVQTGGGSTGK-FWAHEHWGLDDPADVM---TFSKKMMT-----GGFFHKE---------EFRPNAPYRIFNTWLGDP  348 (461)
T ss_dssp             EECTTTCSSTTSS-SSGGGGGCCSSCCSEE---EECGGGSS-----EEEEECG---------GGSCSSTTSSCCSCSSCH
T ss_pred             ccccccccccccc-cccccccccccCchhh---hhhhcccc-----ccccccc---------cccccccccccccccccc
Confidence            9999998866664 334444332  23444   78897543     4443321         11111112 334567788


Q ss_pred             hhHHHHHhhhh
Q 021547          299 LIQVCEMFLLV  309 (311)
Q Consensus       299 ~~q~~~~~~l~  309 (311)
                      ++.+++.+.|+
T Consensus       349 ~~~aaa~a~l~  359 (461)
T d1ohwa_         349 SKNLLLAEVIN  359 (461)
T ss_dssp             HHHHHHHHHHH
T ss_pred             ccchhhcccch
Confidence            88888877664

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=98.79  E-value=4.1e-09  Score=92.44  Aligned_cols=193  Identities=12%  Similarity=-0.052  Sum_probs=116.1

Q ss_pred             CCeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCCCC-----CCCcHHHHHHHHHHHhhcCCCCCCCC-CE
Q 021547           45 RPVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSM-----FNCYAP-----MFGLPLARRAVAEYLNRDLPYKLSAD-DI  113 (311)
Q Consensus        45 ~~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~~-----~~g~~~lr~~ia~~l~~~~g~~~~~~-~v  113 (311)
                      +.+.||+-|-      .+.|++|.++|.+.+-.-.     ....++     ..-+.+.|+.++++++      +..+ .|
T Consensus         2 ~~~~nF~pGP------~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~------~~~~~~i   69 (360)
T d1w23a_           2 KQVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQ------IPNDYQI   69 (360)
T ss_dssp             CCCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHT------CCTTEEE
T ss_pred             CceeEeCCCC------cCCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhC------CCCCCEE
Confidence            3577898884      4678999999998763210     000011     0122457777777774      2333 57


Q ss_pred             EEeCChHHHHHHHHHHH-hcCCCCEEEecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEE
Q 021547          114 YITLGCMEAVEIILTVI-TRLGAANILLPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVI  190 (311)
Q Consensus       114 ~~t~g~~~a~~~~~~~l-~~~g~d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i  190 (311)
                      ++++|++++...+.... ..++ +.+++....+..  +...++..+...+.......  .....+.++......+    +
T Consensus        70 ~~~~gt~~~~~~~~~~~~~~~~-~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----~  142 (360)
T d1w23a_          70 LFLQGGASLQFTMLPMNLLTKG-TIGNYVLTGSWSEKALKEAKLLGETHIAASTKAN--SYQSIPDFSEFQLNEN----D  142 (360)
T ss_dssp             EEESSHHHHHHHHHHHHHCCTT-CEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGG--TSCSCCCGGGCCCCTT----E
T ss_pred             EEeCCcHHHHHHHHHhhhcccC-cccceeeccchhhhhHHHHHHhhhcceeeccccc--cccchhhhhhcccccc----c
Confidence            88888876666544444 4566 888877655543  34566667766666544322  1233344444433322    2


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          191 INPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       191 ~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      ++..|.||...+   +.++.++|+++|+++|+|.+.+...    ....+..++     +.+.+++|.++++|. .|+++
T Consensus       143 ~~~~~~tg~~~~---~~~i~~~~~~~g~l~ivDavqs~g~----~~id~~~~~-----vd~~~~~~~k~~~~~-~~~~~  208 (360)
T d1w23a_         143 AYLHITSNNTIY---GTQYQNFPEINHAPLIADMSSDILS----RPLKVNQFG-----MIYAGAQKNLGPSGV-TVVIV  208 (360)
T ss_dssp             EEEEEESEETTT---TEECSSCCCCCSSCEEEECTTTTTS----SCCCGGGCS-----EEEEETTTTTSCTTC-EEEEE
T ss_pred             ceeEecCCcccc---ceeeeeccccceeeEEeeccccccc----ccccccccc-----ceEEeeccccccCCc-ceeeE
Confidence            233566888888   7888999999999999999999632    333444332     566677787666553 34443

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=98.74  E-value=2.4e-09  Score=93.65  Aligned_cols=196  Identities=11%  Similarity=-0.089  Sum_probs=123.0

Q ss_pred             CeeecCCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC-----CCC-CC----CcHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 021547           46 PVIPLGHGDPAAFPCFRTAAVAEDAIVDSVRSSMFNC-----YAP-MF----GLPLARRAVAEYLNRDLPYKLSADDIYI  115 (311)
Q Consensus        46 ~~i~~~~g~p~~~~~~~~~~~~~~a~~~~~~~~~~~~-----Y~~-~~----g~~~lr~~ia~~l~~~~g~~~~~~~v~~  115 (311)
                      .+.||+-|-      ...|++|+++|.+.+......+     .++ +.    -+.+.|+.++++++.     -+...|++
T Consensus         1 ~~~nF~pGP------~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~-----~~~~~v~~   69 (360)
T d1bjna_           1 QIFNFSSGP------AMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNV-----PSNYKVLF   69 (360)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTC-----CTTEEEEE
T ss_pred             CeEEeCCCC------cCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCC-----CCCCEEEE
Confidence            367897773      4678999999998764211000     111 11    135667777777742     12346788


Q ss_pred             eCChHHHHH-HHHHHHhcCCCCEEEecCCCCcc--hHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeC
Q 021547          116 TLGCMEAVE-IILTVITRLGAANILLPRPGWPF--YESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIIN  192 (311)
Q Consensus       116 t~g~~~a~~-~~~~~l~~~g~d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~  192 (311)
                      ++|++.+.. ++...+..++ +.+++....+..  +...++..+...+......  +...+.+.+++.+..+++++++++
T Consensus        70 ~~gs~t~~~~a~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~v~~  146 (360)
T d1bjna_          70 CHGGGRGQFAAVPLNILGDK-TTADYVDAGYWAASAIKEAKKYCTPNVFDAKVT--VDGLRAVKPMREWQLSDNAAYMHY  146 (360)
T ss_dssp             ESSHHHHHHHHHHHHHCTTC-CEEEEEESSHHHHHHHHHHTTTSEEEEEECEEE--ETTEEEECCGGGCCCCSSCSCEEE
T ss_pred             ECCchHHHHhhhhhcccccc-cccceecccchhhhhHHHHhhcCccceeecccc--CCCcchhhhhhhhccCCceeEEEe
Confidence            777766554 5555555667 888887766654  3456666666666554432  223456666777788888888888


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCCcceeeEEE
Q 021547          193 PCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVPGWRFGWLA  269 (311)
Q Consensus       193 p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~i~  269 (311)
                      .+|.||...+   ++.+  .++.+++.+++|.+.+...    .......+     .+.+.|.+|.++.|+.-.+++.
T Consensus       147 ~~~~t~~~~~---~~~i--~~~~~~~~v~vDa~~~~~~----~~vd~~~~-----dv~~~ss~k~~~~~~~~~~~~~  209 (360)
T d1bjna_         147 CPNETIDGIA---IDET--PDFGADVVVAADFSSTILS----RPIDVSRY-----GVIYAGAQKNIGPAGLTIVIVR  209 (360)
T ss_dssp             CSEETTTTEE---CCCC--CCCCTTCCEEEECTTTTTS----SCCCGGGC-----SEEEEETTTTTSSTTCEEEEEE
T ss_pred             cccccccCcc---ccce--ecccccceeeeeeeccccc----eeeeeccc-----eeEEEEcccccccCCCceeEee
Confidence            8888888766   3333  3456799999999888632    12222222     2888899999877664444443

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=98.08  E-value=8.8e-05  Score=65.80  Aligned_cols=170  Identities=24%  Similarity=0.309  Sum_probs=106.4

Q ss_pred             CCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHc
Q 021547           82 CYAP--MFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYE----SFAKRN  155 (311)
Q Consensus        82 ~Y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~----~~~~~~  155 (311)
                      .|.|  ++|.-++.-.+..++.+.-|  ++.-+.-.-.|+++....++.+....+.+++++....|+.+.    ..++..
T Consensus        97 PyqpE~sQG~Lq~l~e~q~~l~eltG--md~~n~s~~~ga~a~~~~~~~~~~~~~~~~~~v~~~~~p~~~~v~~t~a~~~  174 (437)
T d1wyua1          97 PYQPEVSQGVLQATFEYQTMIAELAG--LEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAV  174 (437)
T ss_dssp             CCSGGGCHHHHHHHHHHHHHHHHHHT--SSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHT
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhC--CCccccCchHHHHHHHHHHHHHHhhhcccccccccccChHHhhhhhhhcccc
Confidence            4554  45655555555555554334  333345566788887777776665434378999999997654    356778


Q ss_pred             CcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccCCccCCCC
Q 021547          156 HIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEVYGHLAFGSTP  235 (311)
Q Consensus       156 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~ay~~~~~~~~~  235 (311)
                      |++++.++....   ..+.+    .+.+++.++++++||+ .|..-+   ++++.+++++.|.++++|..--  ...+. 
T Consensus       175 g~~vv~v~~~~~---~~~~~----~~~~~~Aavmi~~Pnt-~G~~ed---~~~i~~~~h~~G~l~~~~ad~~--al~~l-  240 (437)
T d1wyua1         175 GAKLLTLPLEGG---RTPLP----EVGEEVGAVVVQNPNF-LGALED---LGPFAEAAHGAGALFVAVADPL--SLGVL-  240 (437)
T ss_dssp             TCEEEEECCBTT---BCCCC----CCCTTEEEEEEESSCT-TSBCCC---HHHHHHHHHHTTCEEEEECCTT--GGGTB-
T ss_pred             eeeEEeeecccc---cchhh----hhccceeEEEEccccc-cccccc---hHHHHHHhhhccceEEeeechh--hhhcc-
Confidence            999999986432   22322    2567899999999954 787754   8999999999999877664322  12111 


Q ss_pred             CCcccccCCCCCeEEEecCcccCCCC----cceeeEEEeeC
Q 021547          236 YIPMGVFGSIVPVITLGSISKRWIVP----GWRFGWLATND  272 (311)
Q Consensus       236 ~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~i~~~~  272 (311)
                       .+...+..   .|++++ +|.||.|    |-..|++.+.+
T Consensus       241 -~~Pg~~Ga---Di~~g~-~q~fg~p~g~GGP~~G~~a~~~  276 (437)
T d1wyua1         241 -KPPGAYGA---DIAVGD-GQSLGLPMGFGGPHFGFLATKK  276 (437)
T ss_dssp             -CCHHHHTC---SEEEEE-CTTTTCCCGGGCSCCEEEEECG
T ss_pred             -cccccccc---ceEeec-cceeccccCCCcCccccccccc
Confidence             11122222   266767 6666554    45567777653

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=97.43  E-value=0.0044  Score=55.15  Aligned_cols=189  Identities=16%  Similarity=0.104  Sum_probs=111.7

Q ss_pred             HHHHHHHHHHHhcCCCCCCCC---CCCcH----HHHHHHHHHHhhcCCCCCCCCCEEEeCChHHHHHHHHHHHh---cCC
Q 021547           65 AVAEDAIVDSVRSSMFNCYAP---MFGLP----LARRAVAEYLNRDLPYKLSADDIYITLGCMEAVEIILTVIT---RLG  134 (311)
Q Consensus        65 ~~~~~a~~~~~~~~~~~~Y~~---~~g~~----~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~---~~g  134 (311)
                      |.+.+.+.+.. . .+..|.|   ++|.-    ++...|+++.      +++--|.-.-.|++.+.++++.+..   +.+
T Consensus        79 P~v~~~~~~~~-T-aYTPYQPaEiSQG~LQalfEfQtmi~eLT------GMdvaNaS~yDGatA~aeA~~ma~r~~~~~~  150 (471)
T d1wyub1          79 PKLHEEAARLF-A-DLHPYQDPRTAQGALRLMWELGEYLKALT------GMDAITLEPAAGAHGELTGILIIRAYHEDRG  150 (471)
T ss_dssp             CHHHHHHHHTT-S-SCCTTSCGGGCHHHHHHHHHHHHHHHHHH------TCSEEECCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             cchhhhHHHHH-h-ccCCCCCHHHHHHHHHHHHHHHHHHHHHh------CCCccccccchHHHHHHHHHHHHHHHhhhcc
Confidence            45556655422 1 2445665   44443    4555666666      2322334445677766665555442   222


Q ss_pred             C----CEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCccCCCHHHHHHHH
Q 021547          135 A----ANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCGNVLTYQHLQKIA  210 (311)
Q Consensus       135 ~----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~  210 (311)
                      .    ..++.....+..+.......+..++.++..  .....+.+.+......++.++++.+|++..+..-.   .+.++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~v~v~~p~~~g~~e~~---~~~~~  225 (471)
T d1wyub1         151 EGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG--PEGEVDLEALKRELGPHVAALMLTNPNTLGLFERR---ILEIS  225 (471)
T ss_dssp             CTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC--TTSSBCHHHHHHHCSTTEEEEEECSSCTTSCCCTT---HHHHH
T ss_pred             cccccccccCCcccccceeeeeecccceeeccccc--ccccccchhhhhhhhccccceeeccCCCcccccch---hhhhH
Confidence            0    233344444455566777778887777643  34567888888888888889999998876655444   78889


Q ss_pred             HHHHHhCCEEEEeccccCCccCCCCCCcccccCCCCCeEEEecCcccCCCC----cceeeEEEeeC
Q 021547          211 ETARKLGILVIADEVYGHLAFGSTPYIPMGVFGSIVPVITLGSISKRWIVP----GWRFGWLATND  272 (311)
Q Consensus       211 ~l~~~~~~~li~D~ay~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~i~~~~  272 (311)
                      +++++.+..+++|.+-......-.++.   .   .+..+++.+.++.||.|    |--+|++.+.+
T Consensus       226 ~~~h~~g~~~~~~~~~~~~~~~l~~p~---~---~g~div~vg~~q~~G~P~~~GGP~~G~~a~~~  285 (471)
T d1wyub1         226 RLCKEAGVQLYYDGANLNAIMGWARPG---D---MGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKA  285 (471)
T ss_dssp             HHHHHHTCEEEEEGGGGGGTTTTCCHH---H---HTCSEEECCTTTTTCCCCTTSCCCCCCEEECG
T ss_pred             HHHHhccccccccccchhhhhhccccC---c---ccccccccccccccccccccccccccceeehh
Confidence            999999998888876554322111111   1   11125556777766554    56678877643

>d1ofux_ c.37.1.22 (X:) Hypothetical protein PA3008 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Bacterial cell division inhibitor SulA
domain: Hypothetical protein PA3008
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.48  E-value=0.98  Score=31.37  Aligned_cols=105  Identities=10%  Similarity=0.043  Sum_probs=66.6

Q ss_pred             CEEEeCChHHHHHHHHHHHh---cCC-CCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccE
Q 021547          112 DIYITLGCMEAVEIILTVIT---RLG-AANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAA  187 (311)
Q Consensus       112 ~v~~t~g~~~a~~~~~~~l~---~~g-~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  187 (311)
                      ++.....+.+.+.+++-.|.   ... ..-|+...|-|.+|...+...|+....+-+....+..-.+..+|+.++.++..
T Consensus         6 el~~~~~~~~~l~LL~P~L~~l~~~~~~rwi~wI~Pp~~p~a~~L~~~Gi~~~rll~v~~~~~~d~lwa~EqaL~sg~~~   85 (119)
T d1ofux_           6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSH   85 (119)
T ss_dssp             EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEE
T ss_pred             eecccCCcHHHHHHHHHHHHHHHhcCCCcEEEEEcCCCccCHHHHHHcCCCCCeEEEEeCCChHHHHHHHHHHHhcCCcc
Confidence            34455555555655555543   222 03477778888899999999998644333322222222345567788877777


Q ss_pred             EEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 021547          188 IVIINPCNPCGNVLTYQHLQKIAETARKLGILVI  221 (311)
Q Consensus       188 i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li  221 (311)
                      .++..+.+     ++..+++++--.|++.+...+
T Consensus        86 aVl~w~~~-----l~~~~~RRLqlAA~~g~t~~~  114 (119)
T d1ofux_          86 TVVSWLEP-----LSRAARKQLSRAAQLGQAQSL  114 (119)
T ss_dssp             EEEECCSS-----CCHHHHHHHHHHHHHHTCEEE
T ss_pred             EEEEcCCC-----CChHHHHHHHHHHHhcCCEEE
Confidence            77776532     577789999888888876654

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=81.70  E-value=3.9  Score=29.57  Aligned_cols=103  Identities=10%  Similarity=0.134  Sum_probs=59.2

Q ss_pred             CCCCCCEEEeCChHHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCcc
Q 021547          107 KLSADDIYITLGCMEAVEIILTVITRLGAANILLPRPGWPFYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTA  186 (311)
Q Consensus       107 ~~~~~~v~~t~g~~~a~~~~~~~l~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~  186 (311)
                      .....+|++...|..+ ..++..|...|...+.+..-+.......++..+..+.            +.+++.+.+. +..
T Consensus        21 ~l~~~~ilviGaG~~g-~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~------------~~~~~~~~l~-~~D   86 (159)
T d1gpja2          21 SLHDKTVLVVGAGEMG-KTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAV------------RFDELVDHLA-RSD   86 (159)
T ss_dssp             CCTTCEEEEESCCHHH-HHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEEC------------CGGGHHHHHH-TCS
T ss_pred             CcccCeEEEECCCHHH-HHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccc------------cchhHHHHhc-cCC
Confidence            3455566554333333 4666777777746788888887666667777765532            3455665554 344


Q ss_pred             EEEEeCCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecc
Q 021547          187 AIVIINPCNPCGNVLTYQHLQKIAETARKLGILVIADEV  225 (311)
Q Consensus       187 ~i~i~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D~a  225 (311)
                      .++.++. .|. .+++.+.++...+.-....-.+|+|-+
T Consensus        87 ivi~ats-s~~-~ii~~~~i~~~~~~r~~~~~~~iiDla  123 (159)
T d1gpja2          87 VVVSATA-APH-PVIHVDDVREALRKRDRRSPILIIDIA  123 (159)
T ss_dssp             EEEECCS-SSS-CCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             EEEEecC-CCC-ccccHhhhHHHHHhcccCCCeEEEeec
Confidence            5554443 222 236766666655433233457899964

>d1rd5a_ c.1.2.4 (A:) Trp synthase alpha-subunit {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Ribulose-phoshate binding barrel
family: Tryptophan biosynthesis enzymes
domain: Trp synthase alpha-subunit
species: Maize (Zea mays) [TaxId: 4577]

Probab=81.36  E-value=11  Score=29.66  Aligned_cols=154  Identities=13%  Similarity=0.172  Sum_probs=89.2

Q ss_pred             CCCeeecCCC--CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEeCChHH
Q 021547           44 PRPVIPLGHG--DPAAFPCFRTAAVAEDAIVDSVRSSMFNCYAPMFGLPLARRAVAEYLNRDLPYKLSADDIYITLGCME  121 (311)
Q Consensus        44 ~~~~i~~~~g--~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~g~~~  121 (311)
                      +-++|-++..  +|.     .--|.++++..+++..+.        ....+-+.+.+.-+.      ..--+++.+.-..
T Consensus        44 G~DiiElGiPfSDP~-----aDGpvIq~a~~rAL~~G~--------~~~~~~~~~~~~r~~------~~~p~ilm~Y~n~  104 (261)
T d1rd5a_          44 GADVIELGVPCSDPY-----IDGPIIQASVARALASGT--------TMDAVLEMLREVTPE------LSCPVVLLSYYKP  104 (261)
T ss_dssp             TCSSEEEECCCSCCT-----TSCHHHHHHHHHHHTTTC--------CHHHHHHHHHHHGGG------CSSCEEEECCSHH
T ss_pred             CCCEEEECCCCCCcC-----cCCcceeeeeeeccccCc--------chhhhhhhhhccccc------ccCceeeeeeecc
Confidence            5677777654  442     223667777777765331        233444444444221      1223445454444


Q ss_pred             HHHHHHHHHhcCCCCEEEecCCCCc---chHHHHHHcCcEEEEeeccCCCCcccCHHHHHhhcCCCccEEEEeCCCCCCc
Q 021547          122 AVEIILTVITRLGAANILLPRPGWP---FYESFAKRNHIEVRHFDLLPERGWEVDLEAVEALADENTAAIVIINPCNPCG  198 (311)
Q Consensus       122 a~~~~~~~l~~~g~d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG  198 (311)
                      .+...+..+.+.|.|.+++++--+.   .+...++..|+..+.+=. +    ..+.+.+++..+....-+++.+-..-||
T Consensus       105 ~~~~~~~~~~~~GvdG~IipDlp~eE~~~~~~~~~~~gl~~I~lva-P----tt~~~Ri~~i~~~a~gFvY~vs~~GvTG  179 (261)
T d1rd5a_         105 IMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTT-P----AIPEDRMKEITKASEGFVYLVSVNGVTG  179 (261)
T ss_dssp             HHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEEC-T----TSCHHHHHHHHHHCCSCEEEECSSCCBC
T ss_pred             hhhHHHHHHHhcCceeeeecCccHHHHHHHHHHHhccccceEEEec-c----CCchhHHHHHHhcCcchhhhhhccCccc
Confidence            5544455566778899999875444   356677888887776532 2    2366777776665666677666666677


Q ss_pred             cCCC-HHHHHHHHHHHHHh-CCEEE
Q 021547          199 NVLT-YQHLQKIAETARKL-GILVI  221 (311)
Q Consensus       199 ~~~~-~~~l~~l~~l~~~~-~~~li  221 (311)
                      ...+ ..++.++++..+++ ++.++
T Consensus       180 ~~~~~~~~~~~~i~~ik~~t~~Pi~  204 (261)
T d1rd5a_         180 PRANVNPRVESLIQEVKKVTNKPVA  204 (261)
T ss_dssp             TTSCBCTHHHHHHHHHHHHCSSCEE
T ss_pred             ccccchhHHHHHHHHhhhccCCCeE
Confidence            5432 23567777777766 44444