Citrus Sinensis ID: 021557

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-
Protein Sequence
MKKTTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHccccHHHHHHHHHHHHHHcccEEEEEEccccHHHHHccccccccHHHHHHHcccccccccccccccccccccccccccccEEEEEEccccccccHHHHHHHHHHHcccccEEEEccccccccccccccccccHHHHHHHHHcccEEEEEEEEcccccccccccEEEEEcccccEEEEEEEcccccccEEEEEEccccccHHHHHHHHcccccccccccccHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccEcccccccHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHcccHHHHHHHHHHHHcccccccccccEEEEcccccccccccccEEEEEEccccccccHHHHHHHHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHccEEEEEEcccccccccccHHHHHHHccccEEEEEEcccccccccEEEEEcccccccHHHHHHHHcccccccccccccHHHHHHccc
Coil and Loop (DISEMBL)
mkkttavkpvherksrsnqvsssqdnwkgiptrlnniphsreirNYFYDDVLQATQRAVNDGRTRLKVeinipelnpemdvYRIGTLMELVRVIALSfaddgkrvKVCVQgsmgegalagmplqlagTRKIlefmdwgdygakgtfveigsiganevdeqddMFILVAPQNAVGNCIIDDMKAmtdaagtrpvilinprlkdlpgssgimqtmgRDKRLEYAASFENCYFFRLLYYagtqypimgalrmtypngyelykrvdvpsggeKYVILSTFtekpssddindaflgkprnrekkasgFWGFLSSVF
Flexible Loop (DISEMBL)
mkkttavkpvherksrsnqvsssqdnwkgiptrlnniphsrEIRNYFYDDVLQATQRavndgrtrlkveinipelnpemdvYRIGTLMELVRVIALsfaddgkrVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGtrpvilinprlkdlpgssgIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILStftekpssddindaflgkprnrekkasgfwgflssvf
Low Complexity Region (SEG)
MKKTTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF
Disordered region (IsUnstruct)
*******************************TRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLP***GIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFT*************************FWGF*****
Disordered Region (DISOPRED)
**********************************NNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTF***********DEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDI*******************GFLSSVF
Disordered Region (DISEMBL)
*************************NWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF
Disordered Region (DISPRO)
**************************WKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGK*******************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKKTTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	311
359484753	597	PREDICTED: uncharacterized protein LOC10	0.977	0.509	0.845	1e-153
255565097	597	adenylate kinase, putative [Ricinus comm	0.971	0.505	0.847	1e-153
296084582	652	unnamed protein product [Vitis vinifera]	0.942	0.449	0.866	1e-152
449493659	609	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.964	0.492	0.816	1e-146
356532999	1016	PREDICTED: uncharacterized protein LOC10	0.935	0.286	0.828	1e-145
449443265	577	PREDICTED: uncharacterized protein LOC10	0.990	0.533	0.782	1e-144
356556590	591	PREDICTED: uncharacterized protein LOC10	0.926	0.487	0.833	1e-144
224144020	520	predicted protein [Populus trichocarpa]	0.877	0.525	0.882	1e-144
22327339	588	adenylate kinase family protein [Arabido	0.964	0.510	0.756	1e-136
297801048	595	adenylate kinase family protein [Arabido	0.942	0.492	0.774	1e-136

>gi|359484753|ref|XP_002264815.2| PREDICTED: uncharacterized protein LOC100256872 [Vitis vinifera]

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 257/304 (84%), Positives = 278/304 (91%)

Query: 8   KPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLK 67
           K +   +  SN  SSSQ+NW+GIPTRLNNIPHSREIR YFYDDVLQATQRAVNDGRTRLK
Sbjct: 294 KSIRASERLSNLASSSQENWRGIPTRLNNIPHSREIRTYFYDDVLQATQRAVNDGRTRLK 353

Query: 68  VEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAG 127
           VEINIPELNPEMDVYRIGTLMELVRV+ALSFADDGK VKVCVQGSMGEGALAGMPLQLAG
Sbjct: 354 VEINIPELNPEMDVYRIGTLMELVRVLALSFADDGKHVKVCVQGSMGEGALAGMPLQLAG 413

Query: 128 TRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDA 187
           TRKILEFMDWGDYGAKGTF+ IGSIG+ EV+EQDD+FILVAPQNAVGNCIIDD+KAMTDA
Sbjct: 414 TRKILEFMDWGDYGAKGTFINIGSIGSKEVEEQDDLFILVAPQNAVGNCIIDDLKAMTDA 473

Query: 188 AGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGAL 247
           AG RPVIL+NPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGA+
Sbjct: 474 AGNRPVILVNPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGAI 533

Query: 248 RMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFL 307
           RM+YP  YELYKRVD   G EKY+ILST + +P+ D+INDAFLGKPR+  KKA+GFWGFL
Sbjct: 534 RMSYPYRYELYKRVDESFGKEKYIILSTSSARPNIDEINDAFLGKPRSEAKKATGFWGFL 593

Query: 308 SSVF 311
           S + 
Sbjct: 594 SGIL 597

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565097|ref|XP_002523541.1| adenylate kinase, putative [Ricinus communis] gi|223537248|gb|EEF38880.1| adenylate kinase, putative [Ricinus communis]

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 256/302 (84%), Positives = 277/302 (91%)

Query: 10  VHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVE 69
           + + +S  NQ S SQD W+GIPTRLNNIPHSREIR YFYDDVLQATQRAVNDGR RLKVE
Sbjct: 296 IPKSESSYNQASVSQDKWRGIPTRLNNIPHSREIRTYFYDDVLQATQRAVNDGRMRLKVE 355

Query: 70  INIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTR 129
           I IPELNPEMDVYRIGTLMELVRV+ALSFADDGKRVKVCVQGSMG+GALAGMPLQL+GTR
Sbjct: 356 IAIPELNPEMDVYRIGTLMELVRVLALSFADDGKRVKVCVQGSMGQGALAGMPLQLSGTR 415

Query: 130 KILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAG 189
           KILEFMDWGDYGA GTF+ IGSIGA EVDE DDMFILVAPQNAVGNCIIDD++AMTDAAG
Sbjct: 416 KILEFMDWGDYGALGTFIRIGSIGAKEVDEDDDMFILVAPQNAVGNCIIDDLRAMTDAAG 475

Query: 190 TRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRM 249
           +RPVIL+NPRLKDLPGSSGIMQTMGR +RLEYAASFENCY FRLLYY GTQYPIMGALRM
Sbjct: 476 SRPVILVNPRLKDLPGSSGIMQTMGRAERLEYAASFENCYSFRLLYYGGTQYPIMGALRM 535

Query: 250 TYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSS 309
           +YP  YELYKRVD+P+ GEKY ILSTF+EKP+ DDINDAFLG+ RN++KKASGFWGFLS 
Sbjct: 536 SYPYHYELYKRVDLPARGEKYEILSTFSEKPTGDDINDAFLGRSRNQDKKASGFWGFLSG 595

Query: 310 VF 311
           V 
Sbjct: 596 VL 597

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084582|emb|CBI25603.3| unnamed protein product [Vitis vinifera]

 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 254/293 (86%), Positives = 273/293 (93%)

Query: 19  QVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPE 78
           Q S SQ+NW+GIPTRLNNIPHSREIR YFYDDVLQATQRAVNDGRTRLKVEINIPELNPE
Sbjct: 360 QASLSQENWRGIPTRLNNIPHSREIRTYFYDDVLQATQRAVNDGRTRLKVEINIPELNPE 419

Query: 79  MDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWG 138
           MDVYRIGTLMELVRV+ALSFADDGK VKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWG
Sbjct: 420 MDVYRIGTLMELVRVLALSFADDGKHVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWG 479

Query: 139 DYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINP 198
           DYGAKGTF+ IGSIG+ EV+EQDD+FILVAPQNAVGNCIIDD+KAMTDAAG RPVIL+NP
Sbjct: 480 DYGAKGTFINIGSIGSKEVEEQDDLFILVAPQNAVGNCIIDDLKAMTDAAGNRPVILVNP 539

Query: 199 RLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELY 258
           RLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGA+RM+YP  YELY
Sbjct: 540 RLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGAIRMSYPYRYELY 599

Query: 259 KRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF 311
           KRVD   G EKY+ILST + +P+ D+INDAFLGKPR+  KKA+GFWGFLS + 
Sbjct: 600 KRVDESFGKEKYIILSTSSARPNIDEINDAFLGKPRSEAKKATGFWGFLSGIL 652

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449493659|ref|XP_004159398.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101226743 [Cucumis sativus]

 Score =  523 bits (1346), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 245/300 (81%), Positives = 269/300 (89%)

Query: 12  ERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEIN 71
           E K   NQ S S+D+W+GIPTRLNNIPHSREIR YFYDDVLQAT+RAV  GRTRLKVE N
Sbjct: 310 ENKGTVNQPSESRDSWRGIPTRLNNIPHSREIRKYFYDDVLQATKRAVQAGRTRLKVENN 369

Query: 72  IPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKI 131
           IPELNPEMDVYRIGTLMELVR IALSFADDG+RVKVC+QGSMGEGAL+GMPLQLAGTR+I
Sbjct: 370 IPELNPEMDVYRIGTLMELVRTIALSFADDGRRVKVCIQGSMGEGALSGMPLQLAGTRRI 429

Query: 132 LEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTR 191
           LE+MDWG+YGA GTFV+IGSIGA EVD++DDMFILVAPQNAVGNCIIDDMKAMTDAAG R
Sbjct: 430 LEYMDWGEYGALGTFVKIGSIGAKEVDDEDDMFILVAPQNAVGNCIIDDMKAMTDAAGDR 489

Query: 192 PVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTY 251
           PVIL+NPRLKDLPGSSGIMQTMGR+KRLEYAASFE CYFFRLLYYAGTQYPIMGALRM+Y
Sbjct: 490 PVILVNPRLKDLPGSSGIMQTMGREKRLEYAASFEICYFFRLLYYAGTQYPIMGALRMSY 549

Query: 252 PNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF 311
           P GYELY+RVD PSG EKY+ LS + ++PS+DDINDAF G  R   K +SG WGFLS + 
Sbjct: 550 PYGYELYRRVDEPSGKEKYIELSKYPKRPSTDDINDAFQGNKRKEAKSSSGIWGFLSGIL 609

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532999|ref|XP_003535056.1| PREDICTED: uncharacterized protein LOC100796331 [Glycine max]

 Score =  519 bits (1337), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 241/291 (82%), Positives = 265/291 (91%)

Query: 21   SSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMD 80
            S+  DNW+GIPTRLNNIPHSREIR YFYDDVLQATQRA+NDG+TR+KV+INIPELNPEMD
Sbjct: 726  SAEADNWRGIPTRLNNIPHSREIRKYFYDDVLQATQRAINDGKTRVKVDINIPELNPEMD 785

Query: 81   VYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDY 140
            VYRIGTLMELVR +ALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDY
Sbjct: 786  VYRIGTLMELVRTLALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDY 845

Query: 141  GAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRL 200
            GAKGTF+ IGSIGA EV+E+DDMFILVAPQNAVGNCIIDD++AMT+AA  RPVILIN RL
Sbjct: 846  GAKGTFINIGSIGAAEVEEEDDMFILVAPQNAVGNCIIDDLRAMTNAAEHRPVILINARL 905

Query: 201  KDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKR 260
            KDLPGSSGIMQTMGRD+RL+YAASFE+CYFFRLLYYAGTQYPIMGA+RMTYP  YELYKR
Sbjct: 906  KDLPGSSGIMQTMGRDQRLKYAASFESCYFFRLLYYAGTQYPIMGAIRMTYPYQYELYKR 965

Query: 261  VDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF 311
            VD   G EKY ILSTF E+P++D+INDAF GKP    +K SG WGFL+ + 
Sbjct: 966  VDESPGKEKYAILSTFPERPTTDEINDAFEGKPSKDPRKTSGIWGFLNGIL 1016

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443265|ref|XP_004139400.1| PREDICTED: uncharacterized protein LOC101203230 [Cucumis sativus]

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 241/308 (78%), Positives = 272/308 (88%)

Query: 4   TTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGR 63
           ++ +  + + K+  +  +S  D+W+GIPTRLNNIPHSREIR YFYDDVLQAT+RAV  GR
Sbjct: 270 SSLLSQIQKEKAMKSGNASFSDSWRGIPTRLNNIPHSREIRKYFYDDVLQATKRAVQAGR 329

Query: 64  TRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPL 123
           TRLKVE NIPELNPEMDVYRIGTLMELVR IALSFADDG+RVKVC+QGSMGEGAL+GMPL
Sbjct: 330 TRLKVENNIPELNPEMDVYRIGTLMELVRTIALSFADDGRRVKVCIQGSMGEGALSGMPL 389

Query: 124 QLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKA 183
           QLAGTR+ILE+MDWG+YGA GTFV+IGSIGA EVD++DDMFILVAPQNAVGNCIIDDMKA
Sbjct: 390 QLAGTRRILEYMDWGEYGALGTFVKIGSIGAKEVDDEDDMFILVAPQNAVGNCIIDDMKA 449

Query: 184 MTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPI 243
           MTDAAG RPVIL+NPRLKDLPGSSGIMQTMGR+KRLEYAASFE CYFFRLLYYAGTQYPI
Sbjct: 450 MTDAAGDRPVILVNPRLKDLPGSSGIMQTMGREKRLEYAASFEICYFFRLLYYAGTQYPI 509

Query: 244 MGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGF 303
           MGALRM+YP GYELY+RVD PSG EKY+ LS + ++PS+DDINDAF G  R   K +SG 
Sbjct: 510 MGALRMSYPYGYELYRRVDEPSGKEKYIELSKYPKRPSTDDINDAFQGNKRKEAKSSSGI 569

Query: 304 WGFLSSVF 311
           WGFLS + 
Sbjct: 570 WGFLSGIL 577

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556590|ref|XP_003546607.1| PREDICTED: uncharacterized protein LOC100818830 [Glycine max]

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 240/288 (83%), Positives = 264/288 (91%)

Query: 24  QDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYR 83
           QD W+GIPTRLNNIPHSREIR YFYDDVLQATQRA++DG+TR+KV+INIPELNPEMDVYR
Sbjct: 304 QDKWRGIPTRLNNIPHSREIRKYFYDDVLQATQRAISDGKTRVKVDINIPELNPEMDVYR 363

Query: 84  IGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAK 143
           IGTLMELVR +ALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAK
Sbjct: 364 IGTLMELVRALALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAK 423

Query: 144 GTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDL 203
           GTF+ IGSIGA EV+EQDDMFILVAPQNAVGNCIIDD++AMT+AA  RPVILIN RLKDL
Sbjct: 424 GTFINIGSIGAAEVEEQDDMFILVAPQNAVGNCIIDDLRAMTNAAEHRPVILINARLKDL 483

Query: 204 PGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDV 263
           PGSSGIMQT+GRD+RL+YAASFE+CYFFRLLYYAGTQYPIMGA+RMTYP  Y+LYKRVD 
Sbjct: 484 PGSSGIMQTIGRDQRLKYAASFESCYFFRLLYYAGTQYPIMGAIRMTYPYQYDLYKRVDE 543

Query: 264 PSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF 311
             G EKYVILSTF E+P++D+INDAF GKP    +K SG WGFLS + 
Sbjct: 544 SPGKEKYVILSTFPERPTTDEINDAFQGKPSKDPRKTSGIWGFLSGIL 591

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144020|ref|XP_002325159.1| predicted protein [Populus trichocarpa] gi|222866593|gb|EEF03724.1| predicted protein [Populus trichocarpa]

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 241/273 (88%), Positives = 261/273 (95%)

Query: 22  SSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDV 81
           S QD W+GIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRL+V+INIPELNPEMDV
Sbjct: 248 SLQDKWRGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLRVDINIPELNPEMDV 307

Query: 82  YRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYG 141
           YRIGTLMELVRVIALSF+DDGK VKVCVQGSMG+GALAGMPLQLAGTR ILEFMDWGDYG
Sbjct: 308 YRIGTLMELVRVIALSFSDDGKHVKVCVQGSMGKGALAGMPLQLAGTRNILEFMDWGDYG 367

Query: 142 AKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLK 201
           AKGTF++IGSIG  EV E+DDMFILVAPQNAVGNCII+D+KAMT AAG+RPVILINP+LK
Sbjct: 368 AKGTFIKIGSIGEQEVSEEDDMFILVAPQNAVGNCIIEDLKAMTVAAGSRPVILINPKLK 427

Query: 202 DLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRV 261
           DLPGSSGIMQTMGRDKRLEYAASFE+CYFFRLLYYAGTQYPIMGALRM+YP  YELYKRV
Sbjct: 428 DLPGSSGIMQTMGRDKRLEYAASFESCYFFRLLYYAGTQYPIMGALRMSYPYRYELYKRV 487

Query: 262 DVPSGGEKYVILSTFTEKPSSDDINDAFLGKPR 294
           D PSG EKY+ILSTF+EKPS+DD+NDAF+G+PR
Sbjct: 488 DQPSGTEKYMILSTFSEKPSTDDVNDAFMGRPR 520

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22327339|ref|NP_198367.2| adenylate kinase family protein [Arabidopsis thaliana] gi|17979434|gb|AAL49859.1| putative adenylate kinase [Arabidopsis thaliana] gi|22136756|gb|AAM91697.1| putative adenylate kinase [Arabidopsis thaliana] gi|110740593|dbj|BAE98401.1| adenylate kinase -like protein [Arabidopsis thaliana] gi|332006553|gb|AED93936.1| adenylate kinase family protein [Arabidopsis thaliana]

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 227/300 (75%), Positives = 265/300 (88%)

Query: 12  ERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEIN 71
           +R  ++++ S  QD W+GIPTRLNNIPHSR+IR YFY+DVLQAT R++ DG TRL+V+IN
Sbjct: 288 KRMIKTDKASPVQDKWRGIPTRLNNIPHSRDIRAYFYEDVLQATIRSIKDGNTRLRVDIN 347

Query: 72  IPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKI 131
           IPELNPEMDVYRIGTLMELV+ +ALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKI
Sbjct: 348 IPELNPEMDVYRIGTLMELVQALALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKI 407

Query: 132 LEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTR 191
           LE+MDWGD    GTFV++G+IG  EVDE+DDMFILVAPQNAVGNCIIDD++AMT AAG R
Sbjct: 408 LEYMDWGDDETLGTFVKLGAIGGKEVDEEDDMFILVAPQNAVGNCIIDDLQAMTTAAGKR 467

Query: 192 PVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTY 251
           PV+LINPRLKDLP SSGIMQTMGR++RLEYA +F+NCY FRLLYY GTQYPIMGALRM+Y
Sbjct: 468 PVVLINPRLKDLPASSGIMQTMGREQRLEYALTFDNCYVFRLLYYLGTQYPIMGALRMSY 527

Query: 252 PNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF 311
           P  YELYKRV+  +G EKYV+L+T+ E+P+ + I+DAF GK R++ KKASG WGFLSSVF
Sbjct: 528 PYRYELYKRVNEENGKEKYVLLATYAERPTPEQIDDAFSGKSRDQSKKASGIWGFLSSVF 587

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801048|ref|XP_002868408.1| adenylate kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297314244|gb|EFH44667.1| adenylate kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 227/293 (77%), Positives = 261/293 (89%)

Query: 19  QVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPE 78
           + S  QD W+GIPTRLNNIPHSR+IR YFY+DVLQAT R++ DG TRL+V+INIPELNPE
Sbjct: 302 KASPVQDKWRGIPTRLNNIPHSRDIRAYFYEDVLQATIRSIKDGNTRLRVDINIPELNPE 361

Query: 79  MDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWG 138
           MDVYRIGTLMELVRV+ALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILE+MDWG
Sbjct: 362 MDVYRIGTLMELVRVLALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEYMDWG 421

Query: 139 DYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINP 198
           D    GTFV++G+IG  EVDE+DDMFILVAPQNAVGNCIIDD++AMT AAG RPV+LINP
Sbjct: 422 DDETLGTFVKLGAIGGKEVDEEDDMFILVAPQNAVGNCIIDDLQAMTTAAGKRPVVLINP 481

Query: 199 RLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELY 258
           RLKDLP SSGIMQTMGR++RLEYA +F+NCY FRLLYY GTQYPIMGALRM+YP  YELY
Sbjct: 482 RLKDLPASSGIMQTMGREQRLEYALTFDNCYVFRLLYYLGTQYPIMGALRMSYPYRYELY 541

Query: 259 KRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF 311
           KRV+  +G EKYV+L+T++E+P+ + I+DAF GK R++ KK SG WGFLSSVF
Sbjct: 542 KRVNEENGKEKYVLLATYSERPTPEQIDDAFSGKSRDQSKKPSGIWGFLSSVF 594

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	311
TAIR|locus:2182407	588	AT5G35170 [Arabidopsis thalian	0.964	0.510	0.756	3.9e-124

TAIR|locus:2182407 AT5G35170 [Arabidopsis thaliana (taxid:3702)]

 Score = 1220 (434.5 bits), Expect = 3.9e-124, P = 3.9e-124
 Identities = 227/300 (75%), Positives = 265/300 (88%)

Query:    12 ERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEIN 71
             +R  ++++ S  QD W+GIPTRLNNIPHSR+IR YFY+DVLQAT R++ DG TRL+V+IN
Sbjct:   288 KRMIKTDKASPVQDKWRGIPTRLNNIPHSRDIRAYFYEDVLQATIRSIKDGNTRLRVDIN 347

Query:    72 IPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKI 131
             IPELNPEMDVYRIGTLMELV+ +ALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKI
Sbjct:   348 IPELNPEMDVYRIGTLMELVQALALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKI 407

Query:   132 LEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTR 191
             LE+MDWGD    GTFV++G+IG  EVDE+DDMFILVAPQNAVGNCIIDD++AMT AAG R
Sbjct:   408 LEYMDWGDDETLGTFVKLGAIGGKEVDEEDDMFILVAPQNAVGNCIIDDLQAMTTAAGKR 467

Query:   192 PVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTY 251
             PV+LINPRLKDLP SSGIMQTMGR++RLEYA +F+NCY FRLLYY GTQYPIMGALRM+Y
Sbjct:   468 PVVLINPRLKDLPASSGIMQTMGREQRLEYALTFDNCYVFRLLYYLGTQYPIMGALRMSY 527

Query:   252 PNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF 311
             P  YELYKRV+  +G EKYV+L+T+ E+P+ + I+DAF GK R++ KKASG WGFLSSVF
Sbjct:   528 PYRYELYKRVNEENGKEKYVLLATYAERPTPEQIDDAFSGKSRDQSKKASGIWGFLSSVF 587


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.137   0.403    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      311       311   0.00080  116 3  11 22  0.40    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  207 KB (2116 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.70u 0.11s 23.81t   Elapsed:  00:00:01
  Total cpu time:  23.70u 0.11s 23.81t   Elapsed:  00:00:01
  Start:  Fri May 10 01:03:40 2013   End:  Fri May 10 01:03:41 2013

GO:0004017 "adenylate kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006139 "nucleobase-containing compound metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016776 "phosphotransferase activity, phosphate group as acceptor" evidence=IEA

GO:0019201 "nucleotide kinase activity" evidence=IEA;ISS

GO:0019205 "nucleobase-containing compound kinase activity" evidence=IEA

GO:0046939 "nucleotide phosphorylation" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006354 "DNA-dependent transcription, elongation" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	311
PLN02842	505	PLN02842, PLN02842, nucleotide kinase	0.0
pfam09353	205	pfam09353, DUF1995, Domain of unknown function (DU	2e-50

>gnl|CDD|178435 PLN02842, PLN02842, nucleotide kinase

 Score =  605 bits (1561), Expect = 0.0
 Identities = 249/298 (83%), Positives = 274/298 (91%)

Query: 12  ERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEIN 71
            +  ++ + S  QD W+GIPTRLNNIPHSREIR YFYDDVLQATQRAVNDGRTRLKVEIN
Sbjct: 208 TKMIKTKKASPVQDKWRGIPTRLNNIPHSREIRAYFYDDVLQATQRAVNDGRTRLKVEIN 267

Query: 72  IPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKI 131
           IPELNPEMDVYRIGTLMELVRV+ALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKI
Sbjct: 268 IPELNPEMDVYRIGTLMELVRVLALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKI 327

Query: 132 LEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTR 191
           LEFMDWGDYGAKGTFV+IG+IGA EVDE+DDMFILVAPQNAVGNCIIDD++AMT AAG R
Sbjct: 328 LEFMDWGDYGAKGTFVKIGAIGAKEVDEEDDMFILVAPQNAVGNCIIDDLQAMTTAAGKR 387

Query: 192 PVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTY 251
           PVIL+NPRLKDLPGSSGIMQTMGR++RLEYAASFENCY FRLLYYAGTQYPIMGALRM+Y
Sbjct: 388 PVILVNPRLKDLPGSSGIMQTMGREQRLEYAASFENCYSFRLLYYAGTQYPIMGALRMSY 447

Query: 252 PNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSS 309
           P  YELYKRVD  +G EKY+IL+TF+E+P+ D+INDAF G+ R++ KKASG WGFLS 
Sbjct: 448 PYRYELYKRVDEENGKEKYIILATFSERPTPDEINDAFSGRSRDQAKKASGIWGFLSI 505

Length = 505

>gnl|CDD|220198 pfam09353, DUF1995, Domain of unknown function (DUF1995)

 Score =  165 bits (421), Expect = 2e-50
 Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 44/241 (18%)

Query: 48  YDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKV 107
            +   +A   A+ DG+TRL+VE+  P L           LM L   +A + A++G+R+  
Sbjct: 9   EEQAKEALLAALKDGKTRLQVELRFPGL----------KLMPLALRLARALAEEGRRLL- 57

Query: 108 CVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILV 167
            V    G  ALA          KIL   D                 + +  + DD+ ILV
Sbjct: 58  VVFPDAGAAALARRDW-GDLAFKILSLSDR--------------KLSEDESKIDDILILV 102

Query: 168 APQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFEN 227
           APQ +     +++++A+ + AG RPVI++NPRL+D   + GI  ++ R++R  + +++E 
Sbjct: 103 APQPSD----LEEVEALCELAGGRPVIMLNPRLED-AAAVGI-GSVARERRRRFLSTWEV 156

Query: 228 CYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDIND 287
            Y+ R L          GAL   YP  ++L+K  +       Y +++ F  +P  ++I+ 
Sbjct: 157 AYYLRPLE-------RGGALFRCYPGPWQLFKEDN-----GGYRLVAEFESRPDPEEIDA 204

Query: 288 A 288
            
Sbjct: 205 L 205

This family of proteins are functionally uncharacterized. Length = 205

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	311
PLN02842	505	nucleotide kinase	100.0
PF09353	209	DUF1995: Domain of unknown function (DUF1995); Int	100.0

>PLN02842 nucleotide kinase

Probab=100.00  E-value=1.9e-92  Score=708.27  Aligned_cols=294  Identities=85%  Similarity=1.368  Sum_probs=285.8

Q ss_pred             cCcccccCCCCCCCCCccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCceeEEEEEcCCCCCCchhhhhhhhHHHHHHHH
Q 021557           16 RSNQVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIA   95 (311)
Q Consensus        16 ~~~~~~~~~~~~~~~p~~ln~vP~~~e~~~~~~~qA~~A~~~Al~dG~~rl~VEl~fP~L~~~~D~~~~~~~~~lar~~~   95 (311)
                      ++++.++++|+|+||||+||||||+||+|+|||+||++||++|++||++|++||++||||+++||+|||||+|+|||+|+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~g~~r~~~~~~~pel~~~~~~~~~~~~~~l~~~~~  291 (505)
T PLN02842        212 KTKKASPVQDKWRGIPTRLNNIPHSREIRAYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVLA  291 (505)
T ss_pred             ccccccchhhhhccCchhhcCCCChHHHHHHHHHHHHHHHHHHHhCCcceEEEEEecCccccccccccchhHHHHHHHHH
Confidence            44577899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCeeEEEecCCcchhhhcCCCccchhhhhhhhhcccCCCCCccceeeeccCCCCCCCCCCCEEEEEeccCCCcc
Q 021557           96 LSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGN  175 (311)
Q Consensus        96 ~~l~~~g~rvrI~fPD~~g~aala~~~~~l~g~~~~~~~~dw~~~~~~~~f~~~~~i~~~~v~~~d~~~Ivv~P~~~v~~  175 (311)
                      .+|+++|+|||||||||||+|||+|+|++|+|+++++++|||++++++++|++++++|+++++++|++||+|+||+.||+
T Consensus       292 ~~~~~~~~~~kv~~~~~~g~~~~~~~~~~~~~~~~~~~~~dw~~~~~~~~~~~~~~~~~~~~~~~d~~~i~v~P~~~v~~  371 (505)
T PLN02842        292 LSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVKIGAIGAKEVDEEDDMFILVAPQNAVGN  371 (505)
T ss_pred             HHHhhcCCceEEEecCCcchhHhccCccccccchhhhhhcccccccccccceeecccccCCCCCCCcEEEEEcCCccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHcCCCcEEEEcCCCCCCCCCcCcccchhhHhHHHhhhcCcEeEEEEEecccCcccceeeEEEeecCCCc
Q 021557          176 CIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGY  255 (311)
Q Consensus       176 ~el~~ve~l~~~a~~rPvVllNp~Led~~s~~Gig~~~~R~~r~~Fl~sfe~vYylr~l~~~g~~~p~~GaLfR~YPgpW  255 (311)
                      |++++||+||+++++|||||+||+|+|+.|++|||++++|++|++|+++|++|||||||+++||+||+.|||+|+||++|
T Consensus       372 ~~~~~~e~~~~~~~~rpvillnp~LeD~~~~vGig~~~~R~~R~~f~~t~~~~Y~~~~l~~~~~~~~~~gal~~~yp~~w  451 (505)
T PLN02842        372 CIIDDLQAMTTAAGKRPVILVNPRLKDLPGSSGIMQTMGREQRLEYAASFENCYSFRLLYYAGTQYPIMGALRMSYPYRY  451 (505)
T ss_pred             cchHHHHHHHHHhCCCeEEEECCcccccccccchhHHHHHHHHHHHHHHhhheeEEEeccccccccccceeeeecCCCCe
Confidence            99999999999999999999999999998899999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEeccCCCCCceEEeeecCCCCCHHHHHHHHcCCCCcccccCcchhhcccc
Q 021557          256 ELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSS  309 (311)
Q Consensus       256 qV~~~~~~~~~~g~y~~v~~~~~rPs~eel~~~l~~~~~~~~~~~~~~~~~~~~  309 (311)
                      |||+++++..++++|+++++|++||++|||+.+|.+++.++++|+|||||||++
T Consensus       452 ~l~~~~~~~~~~~~y~~~~~~~~~P~~e~i~~~~~~~~~~~~~~~~~~~~~~~~  505 (505)
T PLN02842        452 ELYKRVDEENGKEKYIILATFSERPTPDEINDAFSGRSRDQAKKASGIWGFLSI  505 (505)
T ss_pred             eEEEecCccccCcceEEeeecCCCCCHHHHHHHhCCCccchhhccccchhcccC
Confidence            999987754457899999999999999999999999999999999999999985

>PF09353 DUF1995: Domain of unknown function (DUF1995); InterPro: IPR018962 This family of proteins are functionally uncharacterised

Probab=100.00  E-value=2.6e-50  Score=364.38  Aligned_cols=197  Identities=36%  Similarity=0.646  Sum_probs=172.2

Q ss_pred             HHHHHHHHHHHHHHcCCceeEEEEEcCCCCCCchhhhhhhhHHHHHHHHHHHhhCCCeeEEEecCCcchhhhcCCCccch
Q 021557           47 FYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLA  126 (311)
Q Consensus        47 ~~~qA~~A~~~Al~dG~~rl~VEl~fP~L~~~~D~~~~~~~~~lar~~~~~l~~~g~rvrI~fPD~~g~aala~~~~~l~  126 (311)
                      .++||++|+++||++|.+|++||++||+|++        ++++++++|++.|++.|++++++||| +|++++        
T Consensus         8 a~~qA~~Av~~Al~~g~~r~~ve~~fP~l~~--------~~~~la~~~~~~l~~~~~~~~~~~pd-~g~~al--------   70 (209)
T PF09353_consen    8 AVEQAAEAVQAALEDGDSRQLVELEFPGLNP--------SNMPLAREFARKLAASGRRVRVVFPD-AGEAAL--------   70 (209)
T ss_pred             HHHHHHHHHHHHHHcCCCeEEEEEECCCcch--------hHHHHHHHHHHHHHhcCceEEEEcCC-hHHHHH--------
Confidence            7899999999999999999999999999943        37999999999999999999999998 999999        


Q ss_pred             hhhhhhhhcccCCCCCccceeeeccCCCC-CCCC---CCCEEEEEeccCCCccccHHHHHHHHHHcCCCcEEEEcCCCCC
Q 021557          127 GTRKILEFMDWGDYGAKGTFVEIGSIGAN-EVDE---QDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKD  202 (311)
Q Consensus       127 g~~~~~~~~dw~~~~~~~~f~~~~~i~~~-~v~~---~d~~~Ivv~P~~~v~~~el~~ve~l~~~a~~rPvVllNp~Led  202 (311)
                            +.++|++..++     +.++++. ....   .|+++|+|+|++.    +++++|+||+.+++||+|||||+|++
T Consensus        71 ------A~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~vvv~p~~~----~l~~~e~~~~~~~~rpvvl~Np~l~~  135 (209)
T PF09353_consen   71 ------ARRDWGDGSFK-----IASLDDWSSSEDESKFDDILVVVAPSPQ----ELDDVEKLCEAAGGRPVVLLNPQLED  135 (209)
T ss_pred             ------HhccccCCCeE-----EeeccCccccccccccCCEEEEEECChh----hHHHHHHHHHhcCCCeEEEEeccccc
Confidence                  55555444322     3333331 1111   1799999999999    99999999999989999999999999


Q ss_pred             CCCCcCcccchhhHhHHHhhhcCcEeEEEEEecccCcccceeeEEEeecCCCceEEEEeccCCCCCceEEeeecCCCCCH
Q 021557          203 LPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSS  282 (311)
Q Consensus       203 ~~s~~Gig~~~~R~~r~~Fl~sfe~vYylr~l~~~g~~~p~~GaLfR~YPgpWqV~~~~~~~~~~g~y~~v~~~~~rPs~  282 (311)
                      .++ +|+| +++|++|++|+++||+||||||++++|     .|+||||||||||||++++    +|+|+||+++++|||+
T Consensus       136 ~~~-~g~g-~~~r~~~~~Fl~~fe~vY~l~~l~~~~-----~gal~r~yP~~Wqv~~~~~----~~~y~~v~~~~~rP~~  204 (209)
T PF09353_consen  136 VRS-VGFG-FPGRKLRERFLSSFETVYYLRPLRISG-----NGALFRCYPGPWQVFREDD----DGEYECVAEFEERPTY  204 (209)
T ss_pred             CCc-cccc-cccHHHHHHHHhhceEEEEEEeeccCC-----cEEEEEeCCCCcEEEEEcC----CCcEEEEEecccCCCh
Confidence            994 5688 889999999999999999999998875     4999999999999999885    5899999999999999


Q ss_pred             HHHH
Q 021557          283 DDIN  286 (311)
Q Consensus       283 eel~  286 (311)
                      +||+
T Consensus       205 ~e~~  208 (209)
T PF09353_consen  205 EELE  208 (209)
T ss_pred             HHhh
Confidence            9997

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	311
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 1e-04
 Identities = 43/345 (12%), Positives = 90/345 (26%), Gaps = 109/345 (31%)

Query: 13  RKSRSNQV-----SSSQDNWKGIPTRLNNIPHSREI--------RNYFYDDVLQATQRAV 59
              +   V        + N+K + + +        +        R+  Y+D     +  V
Sbjct: 72  LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131

Query: 60  NDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEG--A 117
           +  +  LK+   + EL P  +                          V + G +G G   
Sbjct: 132 SRLQPYLKLRQALLELRPAKN--------------------------VLIDGVLGSGKTW 165

Query: 118 LAGMPLQLAGTRKILEFMD----W---GDYGAKGTFVEI--------------------- 149
           +A        + K+   MD    W    +  +  T +E+                     
Sbjct: 166 VALDVCL---SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222

Query: 150 GSIGANEVDEQDDMFILVAPQNAVGNC--IIDD------MKA--------MTDAAGTRPV 193
             +  + +  +    +   P     NC  ++ +        A        +T    TR  
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYE---NCLLVLLNVQNAKAWNAFNLSCKILLT----TRFK 275

Query: 194 ----ILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYP----IMG 245
                L       +        T+  D+       + +C    L     T  P    I+ 
Sbjct: 276 QVTDFLSAATTTHIS-LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334

Query: 246 ALRMTYPNGYELYKRVDVPSGGEKYV-ILSTFTEKPSSDDINDAF 289
                    ++ +K V+     +K   I+ +        +    F
Sbjct: 335 ESIRDGLATWDNWKHVNC----DKLTTIIESSLNVLEPAEYRKMF 375

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00