Citrus Sinensis ID: 021558

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-
MATMSTLFAKTPLPSRSLSKSNISHFAPPLTSLSFKQKTTAPHFKLRSIRAGLIEPDGGKLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLRLTF
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccEEEEcHHHHHHHHHHHccccccccccccHHHHHcHHccccEEcccccEEEEEEEEEEcccHHHHHccccccEEEEEcccccEEEEEEEcccccccHHHHHHHHccccccccHHHHHHHHccccEEEEEEEEEEcccccccccccccccHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHHHccccccEEEEcccccccccccccHHHHHHHHHHHHHccc
ccHHHHHHccccccccccccccccccccccccEEcccccccccccEEEEccccccccccEEEEccccHHHHHHHHHHHHccccEEEcHHHHHHHHHHHccccccccccccHHHHHcEEEccccEcccccEEcccEEEEEEccHHHHHHcccccEEEEEcccccEEEEEEccccccccHHHHHHHHHccccccccHHHHHHcccccEEEEccEEEEcccccccccccccccHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHHHHcccccEEEEcccccccccccccHHHHHHHHHHHHHHcc
matmstlfaktplpsrslsksnishfappltslsfkqkttaphfklrsiragliepdggklTELIVDKSLRDVRKREAatlprirltkIDLQWVHVLsegwasplsgfmreseFLQTLHFnslrlddgsvvnmsVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDieiykhpkeeriartwgttapglpyvdQAITYAGnwliggdlevlepikyhdgldrfrlspaqlrdEFSKRNADAVFAFqlrnpvhnghalLMTDTRRRLLEMgyqnpilllhplggytkaddvplswrmkQHEKVLRLTF
matmstlfaktplpsrslsksnISHFAppltslsfkqKTTAPHFKLRSiragliepdggkltelivdkslrdvrkreaatlprirltkidlqwvHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVlaiddeqkrrIGEStrvalvdsddnvVAILNdieiykhpkeeriartwgttapglpYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFqlrnpvhnghaLLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHekvlrltf
MATMSTLFAKTPLPSRSLSKSNISHFAPPLTSLSFKQKTTAPHFKLRSIRAGLIEPDGGKLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLRLTF
*****************************************PHFKLRSIRAGLIEPDGGKLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRM***********
******L*************************************************DGGKLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLRLTF
MATMSTLFAKTPLPSRSLSKSNISHFAPPLTSLSFKQKTTAPHFKLRSIRAGLIEPDGGKLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLRLTF
**********T*LPSRSLSKSNISHFAPPLTSLSFKQKTTAPHFKLRSIRAGLIEPDGGKLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLRLTF
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATMSTLFAKTPLPSRSLSKSNISHFAPPLTSLSFKQKTTAPHFKLRSIRAGLIEPDGGKLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLRLTF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query311 2.2.26 [Sep-21-2011]
Q9LIK9 463 ATP sulfurylase 1, chloro yes no 0.977 0.656 0.785 1e-136
O23324 465 ATP-sulfurylase 3, chloro no no 0.980 0.655 0.769 1e-133
Q9S7D8 469 ATP sulfurylase 4, chloro no no 0.836 0.554 0.804 1e-123
Q43870 476 ATP sulfurylase 2 OS=Arab no no 0.922 0.602 0.649 1e-111
O95340 614 Bifunctional 3'-phosphoad yes no 0.781 0.395 0.587 3e-80
O54820 624 Bifunctional 3'-phosphoad yes no 0.784 0.391 0.564 1e-77
O88428 621 Bifunctional 3'-phosphoad yes no 0.906 0.454 0.495 1e-77
O43252 624 Bifunctional 3'-phosphoad no no 0.784 0.391 0.560 2e-77
Q60967 624 Bifunctional 3'-phosphoad no no 0.784 0.391 0.564 3e-77
Q27128 610 Bifunctional 3'-phosphoad N/A no 0.781 0.398 0.578 9e-77
>sp|Q9LIK9|APS1_ARATH ATP sulfurylase 1, chloroplastic OS=Arabidopsis thaliana GN=APS1 PE=1 SV=1 Back     alignment and function desciption
 Score =  485 bits (1249), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 241/307 (78%), Positives = 267/307 (86%), Gaps = 3/307 (0%)

Query: 1   MATMSTLFAKTPLPSRSLSKSNISHFAPPLTSLSFKQKTTAPHFKLRSIRAGLIEPDGGK 60
           MA+M+ + +KTP  S+ L+KS+ +   P   ++SF  K+     ++ SIRAGLI PDGGK
Sbjct: 1   MASMAAVLSKTPFLSQPLTKSSPNSDLP-FAAVSFPSKSL--RRRVGSIRAGLIAPDGGK 57

Query: 61  LTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHF 120
           L ELIV++  R  +K EAA LPR+ LT IDLQW+HVLSEGWASPL GFMRESEFLQTLHF
Sbjct: 58  LVELIVEEPKRREKKHEAADLPRVELTAIDLQWMHVLSEGWASPLGGFMRESEFLQTLHF 117

Query: 121 NSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEE 180
           NSLRLDDGSVVNMSVPIVLAIDDEQK RIGESTRVAL +SD N VAIL+DIEIYKHPKEE
Sbjct: 118 NSLRLDDGSVVNMSVPIVLAIDDEQKARIGESTRVALFNSDGNPVAILSDIEIYKHPKEE 177

Query: 181 RIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSK 240
           RIARTWGTTAPGLPYVD+AIT AGNWLIGGDLEVLEP+KY+DGLDRFRLSPA+LR E  K
Sbjct: 178 RIARTWGTTAPGLPYVDEAITNAGNWLIGGDLEVLEPVKYNDGLDRFRLSPAELRKELEK 237

Query: 241 RNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRM 300
           RNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGY+NPILLLHPLGG+TKADDVPL WRM
Sbjct: 238 RNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLDWRM 297

Query: 301 KQHEKVL 307
           KQHEKVL
Sbjct: 298 KQHEKVL 304
Mediates selenate (Se) reduction, and promotes Se and sulfur (S) uptake and assimilation.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 4
>sp|O23324|APS3_ARATH ATP-sulfurylase 3, chloroplastic OS=Arabidopsis thaliana GN=APS3 PE=1 SV=1 Back     alignment and function description
>sp|Q9S7D8|APS4_ARATH ATP sulfurylase 4, chloroplastic OS=Arabidopsis thaliana GN=APS4 PE=1 SV=1 Back     alignment and function description
>sp|Q43870|APS2_ARATH ATP sulfurylase 2 OS=Arabidopsis thaliana GN=APS2 PE=1 SV=1 Back     alignment and function description
>sp|O95340|PAPS2_HUMAN Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 OS=Homo sapiens GN=PAPSS2 PE=1 SV=2 Back     alignment and function description
>sp|O54820|PAPS1_CAVPO Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Cavia porcellus GN=PAPSS1 PE=2 SV=1 Back     alignment and function description
>sp|O88428|PAPS2_MOUSE Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 OS=Mus musculus GN=Papss2 PE=1 SV=2 Back     alignment and function description
>sp|O43252|PAPS1_HUMAN Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Homo sapiens GN=PAPSS1 PE=1 SV=2 Back     alignment and function description
>sp|Q60967|PAPS1_MOUSE Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Mus musculus GN=Papss1 PE=2 SV=1 Back     alignment and function description
>sp|Q27128|PAPSS_URECA Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase OS=Urechis caupo PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query311
255552027 460 sulfate adenylyltransferase, putative [R 0.967 0.654 0.791 1e-139
224111098 462 predicted protein [Populus trichocarpa] 0.977 0.658 0.779 1e-137
225432812 467 PREDICTED: ATP sulfurylase 1, chloroplas 0.983 0.655 0.776 1e-136
449432652 467 PREDICTED: ATP sulfurylase 1, chloroplas 0.983 0.655 0.758 1e-135
224099857 462 predicted protein [Populus trichocarpa] 0.974 0.655 0.771 1e-135
15228889 463 ATP sulfurylase 1 [Arabidopsis thaliana] 0.977 0.656 0.785 1e-135
479090 463 sulfate adenylyltransferase [Solanum tub 0.974 0.654 0.773 1e-134
297831002 463 hypothetical protein ARALYDRAFT_479799 [ 0.977 0.656 0.781 1e-134
21554105 463 ATP sulfurylase, putative [Arabidopsis t 0.977 0.656 0.778 1e-134
164498974 459 chloroplast ATP sulfurylase 1 precursor 0.977 0.662 0.778 1e-133
>gi|255552027|ref|XP_002517058.1| sulfate adenylyltransferase, putative [Ricinus communis] gi|223543693|gb|EEF45221.1| sulfate adenylyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 243/307 (79%), Positives = 272/307 (88%), Gaps = 6/307 (1%)

Query: 1   MATMSTLFAKTPLPSRSLSKSNISHFAPPLTSLSFKQKTTAPHFKLRSIRAGLIEPDGGK 60
           MA++S L AK   P  SL KS  +HF+ PL  LSF     +P  ++  +RAGLIEPDGGK
Sbjct: 1   MASISNLVAKPTYPPHSLPKSFTAHFSSPL-KLSF-----SPKKRVVQVRAGLIEPDGGK 54

Query: 61  LTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHF 120
           L +L V+KS RD +++EA +LP+I+LTKIDLQWVHVLSEGWASPL+GFMR+SEFLQTLHF
Sbjct: 55  LVQLFVEKSQRDFKRKEAISLPKIKLTKIDLQWVHVLSEGWASPLNGFMRQSEFLQTLHF 114

Query: 121 NSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEE 180
           N LRL+DGSVVNMSVPIVLAIDD  K+RIGES RVALVDS+DN VAILNDIEIYKHPKEE
Sbjct: 115 NCLRLNDGSVVNMSVPIVLAIDDLIKQRIGESKRVALVDSEDNTVAILNDIEIYKHPKEE 174

Query: 181 RIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSK 240
           RIARTWGTTAPGLPYV+Q+IT +GNWLIGGDLEV+EPIKYHDGLDRFRLSPA+LR E +K
Sbjct: 175 RIARTWGTTAPGLPYVEQSITKSGNWLIGGDLEVIEPIKYHDGLDRFRLSPAELRQELTK 234

Query: 241 RNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRM 300
           RNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGY+NP+LLLHPLGGYTKADDVPLSWRM
Sbjct: 235 RNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYKNPVLLLHPLGGYTKADDVPLSWRM 294

Query: 301 KQHEKVL 307
           KQHEKVL
Sbjct: 295 KQHEKVL 301

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224111098|ref|XP_002315747.1| predicted protein [Populus trichocarpa] gi|222864787|gb|EEF01918.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225432812|ref|XP_002283572.1| PREDICTED: ATP sulfurylase 1, chloroplastic [Vitis vinifera] gi|147773026|emb|CAN67181.1| hypothetical protein VITISV_002534 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449432652|ref|XP_004134113.1| PREDICTED: ATP sulfurylase 1, chloroplastic-like [Cucumis sativus] gi|449514837|ref|XP_004164494.1| PREDICTED: ATP sulfurylase 1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224099857|ref|XP_002311647.1| predicted protein [Populus trichocarpa] gi|222851467|gb|EEE89014.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15228889|ref|NP_188929.1| ATP sulfurylase 1 [Arabidopsis thaliana] gi|75273402|sp|Q9LIK9.1|APS1_ARATH RecName: Full=ATP sulfurylase 1, chloroplastic; Short=AtPS1; Flags: Precursor gi|13877583|gb|AAK43869.1|AF370492_1 ATP sulfurylase/APS kinase [Arabidopsis thaliana] gi|11994718|dbj|BAB03034.1| ATP sulfurylase/APS kinase [Arabidopsis thaliana] gi|15292871|gb|AAK92806.1| putative ATP sulfurylase [Arabidopsis thaliana] gi|15809804|gb|AAL06830.1| AT3g22890/F5N5_6 [Arabidopsis thaliana] gi|17978731|gb|AAL47359.1| ATP sulfurylase/APS kinase [Arabidopsis thaliana] gi|20258905|gb|AAM14146.1| putative ATP sulfurylase [Arabidopsis thaliana] gi|27311865|gb|AAO00898.1| Unknown protein [Arabidopsis thaliana] gi|110741464|dbj|BAE98690.1| ATP sulfurylase like protein [Arabidopsis thaliana] gi|332643167|gb|AEE76688.1| ATP sulfurylase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|479090|emb|CAA55655.1| sulfate adenylyltransferase [Solanum tuberosum] Back     alignment and taxonomy information
>gi|297831002|ref|XP_002883383.1| hypothetical protein ARALYDRAFT_479799 [Arabidopsis lyrata subsp. lyrata] gi|297329223|gb|EFH59642.1| hypothetical protein ARALYDRAFT_479799 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|21554105|gb|AAM63185.1| ATP sulfurylase, putative [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|164498974|gb|ABY59052.1| chloroplast ATP sulfurylase 1 precursor [Brassica oleracea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query311
TAIR|locus:2084563 463 APS1 "ATP sulfurylase 1" [Arab 0.977 0.656 0.785 4.3e-125
TAIR|locus:2130080 465 APS3 [Arabidopsis thaliana (ta 0.980 0.655 0.769 9.2e-123
TAIR|locus:2170867 469 APS4 [Arabidopsis thaliana (ta 0.974 0.646 0.702 1.9e-113
TAIR|locus:2035395 476 APS2 [Arabidopsis thaliana (ta 0.919 0.600 0.651 2.3e-101
ZFIN|ZDB-GENE-061110-85 612 papss2a "3'-phosphoadenosine 5 0.807 0.410 0.567 1.3e-75
UNIPROTKB|E7ER89 618 PAPSS2 "Sulfate adenylyltransf 0.774 0.389 0.591 2.7e-75
UNIPROTKB|O95340 614 PAPSS2 "Bifunctional 3'-phosph 0.774 0.392 0.591 2.7e-75
ZFIN|ZDB-GENE-080721-5 815 papss1 "3'-phosphoadenosine 5' 0.784 0.299 0.576 5.7e-75
UNIPROTKB|Q90XY2 613 Q90XY2 "3'-phosphoadenosine 5' 0.829 0.420 0.553 2.5e-74
UNIPROTKB|F1NPR8 616 PAPSS2 "Uncharacterized protei 0.774 0.391 0.595 4e-74
TAIR|locus:2084563 APS1 "ATP sulfurylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1229 (437.7 bits), Expect = 4.3e-125, P = 4.3e-125
 Identities = 241/307 (78%), Positives = 267/307 (86%)

Query:     1 MATMSTLFAKTPLPSRSLSKSNISHFAPPLTSLSFKQKTTAPHFKLRSIRAGLIEPDGGK 60
             MA+M+ + +KTP  S+ L+KS+ +   P   ++SF  K+     ++ SIRAGLI PDGGK
Sbjct:     1 MASMAAVLSKTPFLSQPLTKSSPNSDLP-FAAVSFPSKSLRR--RVGSIRAGLIAPDGGK 57

Query:    61 LTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHF 120
             L ELIV++  R  +K EAA LPR+ LT IDLQW+HVLSEGWASPL GFMRESEFLQTLHF
Sbjct:    58 LVELIVEEPKRREKKHEAADLPRVELTAIDLQWMHVLSEGWASPLGGFMRESEFLQTLHF 117

Query:   121 NSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEE 180
             NSLRLDDGSVVNMSVPIVLAIDDEQK RIGESTRVAL +SD N VAIL+DIEIYKHPKEE
Sbjct:   118 NSLRLDDGSVVNMSVPIVLAIDDEQKARIGESTRVALFNSDGNPVAILSDIEIYKHPKEE 177

Query:   181 RIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSK 240
             RIARTWGTTAPGLPYVD+AIT AGNWLIGGDLEVLEP+KY+DGLDRFRLSPA+LR E  K
Sbjct:   178 RIARTWGTTAPGLPYVDEAITNAGNWLIGGDLEVLEPVKYNDGLDRFRLSPAELRKELEK 237

Query:   241 RNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRM 300
             RNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGY+NPILLLHPLGG+TKADDVPL WRM
Sbjct:   238 RNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLDWRM 297

Query:   301 KQHEKVL 307
             KQHEKVL
Sbjct:   298 KQHEKVL 304
GO:0000103 "sulfate assimilation" evidence=IEA
GO:0004781 "sulfate adenylyltransferase (ATP) activity" evidence=IEA;TAS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0001887 "selenium compound metabolic process" evidence=IMP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP;RCA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0006096 "glycolysis" evidence=RCA
GO:0006569 "tryptophan catabolic process" evidence=RCA
GO:0006833 "water transport" evidence=RCA
GO:0006972 "hyperosmotic response" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0009266 "response to temperature stimulus" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA
GO:0019761 "glucosinolate biosynthetic process" evidence=RCA
GO:0042742 "defense response to bacterium" evidence=RCA
TAIR|locus:2130080 APS3 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170867 APS4 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035395 APS2 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-061110-85 papss2a "3'-phosphoadenosine 5'-phosphosulfate synthase 2a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E7ER89 PAPSS2 "Sulfate adenylyltransferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O95340 PAPSS2 "Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-080721-5 papss1 "3'-phosphoadenosine 5'-phosphosulfate synthase 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q90XY2 Q90XY2 "3'-phosphoadenosine 5'-phosphosulfate synthase 2" [Takifugu rubripes (taxid:31033)] Back     alignment and assigned GO terms
UNIPROTKB|F1NPR8 PAPSS2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LIK9APS1_ARATH2, ., 7, ., 7, ., 40.78500.97740.6565yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.7LOW CONFIDENCE prediction!
4th Layer2.7.7.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query311
TIGR00339 383 TIGR00339, sopT, ATP sulphurylase 1e-94
cd00517 353 cd00517, ATPS, ATP-sulfurylase 2e-90
pfam14306159 pfam14306, PUA_2, PUA-like domain 6e-60
PRK04149 391 PRK04149, sat, sulfate adenylyltransferase; Review 2e-42
PRK05537 568 PRK05537, PRK05537, bifunctional sulfate adenylylt 4e-40
COG2046 397 COG2046, MET3, ATP sulfurylase (sulfate adenylyltr 7e-39
pfam01747 214 pfam01747, ATP-sulfurylase, ATP-sulfurylase 7e-29
>gnl|CDD|232928 TIGR00339, sopT, ATP sulphurylase Back     alignment and domain information 
 Score =  284 bits (729), Expect = 1e-94
 Identities = 103/250 (41%), Positives = 135/250 (54%), Gaps = 12/250 (4%)

Query: 56  PDGGKLTELIV-DKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEF 114
           P GGKL ELIV D  +      EA +LP I L+   L  + +L  G  SPL GFM E+++
Sbjct: 1   PHGGKLVELIVRDPDIEHKLLAEAESLPSITLSDRQLCDLELLGNGAFSPLEGFMNEADY 60

Query: 115 LQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIY 174
              +    +RL DG  V  SVPI L IDDE    I    R+ L D     +AIL   E+Y
Sbjct: 61  DSVVE--DMRLSDG--VLFSVPITLDIDDEDADDIKLGDRILLTDDKGQPLAILTIEEVY 116

Query: 175 KHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQL 234
           K  K +   + +GTT P  P V    + AGN+ IGG +EV+   K++D   RFR +PA+L
Sbjct: 117 KPNKTKEAKKVFGTTDPEHPGVVYLNS-AGNYYIGGPIEVINLPKFYD-FPRFRFTPAEL 174

Query: 235 RDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDV 294
           R+EF +R  D V AFQ RNP+H  H  L     R L      N  +L+HPL G TK  D+
Sbjct: 175 REEFKERGWDTVVAFQTRNPMHRAHEELTKRAARSL-----PNAGVLVHPLVGLTKPGDI 229

Query: 295 PLSWRMKQHE 304
           P   RM+ +E
Sbjct: 230 PAEVRMRAYE 239

This enzyme forms adenosine 5'-phosphosulfate (APS) from ATP and free sulfate, the first step in the formation of the activated sulfate donor 3'-phosphoadenylylsulfate (PAPS). In some cases, it is found in a bifunctional protein in which the other domain, APS kinase, catalyzes the second and final step, the phosphorylation of APS to PAPS; the combined ATP sulfurylase/APS kinase may be called PAPS synthase. Members of this family also include the dissimilatory sulfate adenylyltransferase (sat) of the sulfate reducer Archaeoglobus fulgidus [Central intermediary metabolism, Sulfur metabolism]. Length = 383
>gnl|CDD|173895 cd00517, ATPS, ATP-sulfurylase Back     alignment and domain information
>gnl|CDD|206474 pfam14306, PUA_2, PUA-like domain Back     alignment and domain information
>gnl|CDD|235227 PRK04149, sat, sulfate adenylyltransferase; Reviewed Back     alignment and domain information
>gnl|CDD|180124 PRK05537, PRK05537, bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Validated Back     alignment and domain information
>gnl|CDD|224957 COG2046, MET3, ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216677 pfam01747, ATP-sulfurylase, ATP-sulfurylase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 311
PRK04149 391 sat sulfate adenylyltransferase; Reviewed 100.0
PRK05537 568 bifunctional sulfate adenylyltransferase subunit 1 100.0
COG2046 397 MET3 ATP sulfurylase (sulfate adenylyltransferase) 100.0
TIGR00339 383 sopT ATP sulphurylase. Members of this family also 100.0
cd00517 353 ATPS ATP-sulfurylase. ATP-sulfurylase (ATPS), also 100.0
KOG4238 627 consensus Bifunctional ATP sulfurylase/adenosine 5 100.0
PF14306160 PUA_2: PUA-like domain; PDB: 1M8P_C 1I2D_B 2OFW_G 100.0
KOG0636 466 consensus ATP sulfurylase (sulfate adenylyltransfe 100.0
PF01747 215 ATP-sulfurylase: ATP-sulfurylase; InterPro: IPR002 99.96
KOG0636 466 consensus ATP sulfurylase (sulfate adenylyltransfe 99.89
cd02169 297 Citrate_lyase_ligase Citrate lyase ligase. Citrate 97.32
cd02039143 cytidylyltransferase_like Cytidylyltransferase-lik 96.72
PRK13964140 coaD phosphopantetheine adenylyltransferase; Provi 95.08
cd02163153 PPAT Phosphopantetheine adenylyltransferase. Phosp 94.78
TIGR01510155 coaD_prev_kdtB pantetheine-phosphate adenylyltrans 94.45
cd02165 192 NMNAT Nicotinamide/nicotinate mononucleotide adeny 94.16
PLN02945 236 nicotinamide-nucleotide adenylyltransferase/nicoti 93.72
TIGR0012566 cyt_tran_rel cytidyltransferase-related domain. Pr 93.47
PRK00168159 coaD phosphopantetheine adenylyltransferase; Provi 93.35
TIGR00482 193 nicotinate (nicotinamide) nucleotide adenylyltrans 92.99
TIGR00124 332 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP 92.9
cd02167158 NMNAT_NadR Nicotinamide/nicotinate mononucleotide 92.87
PRK08887 174 nicotinic acid mononucleotide adenylyltransferase; 91.91
PF01467157 CTP_transf_2: Cytidylyltransferase; InterPro: IPR0 91.9
PRK00071 203 nadD nicotinic acid mononucleotide adenylyltransfe 90.92
PRK01153 174 nicotinamide-nucleotide adenylyltransferase; Provi 90.89
cd02164143 PPAT_CoAS phosphopantetheine adenylyltransferase d 90.88
cd09286 225 NMNAT_Eukarya Nicotinamide/nicotinate mononucleoti 90.44
TIGR01526 325 nadR_NMN_Atrans nicotinamide-nucleotide adenylyltr 90.1
PRK06973 243 nicotinic acid mononucleotide adenylyltransferase; 90.1
PRK13671 298 hypothetical protein; Provisional 89.05
cd02168 181 NMNAT_Nudix Nicotinamide/nicotinate mononucleotide 89.03
cd02166163 NMNAT_Archaea Nicotinamide/nicotinate mononucleoti 88.67
PRK00777153 phosphopantetheine adenylyltransferase; Provisiona 87.38
PRK05379 340 bifunctional nicotinamide mononucleotide adenylylt 87.23
cd02156105 nt_trans nucleotidyl transferase superfamily. nt_t 84.72
TIGR01527 165 arch_NMN_Atrans nicotinamide-nucleotide adenylyltr 84.44
COG1057 197 NadD Nicotinic acid mononucleotide adenylyltransfe 82.15
cd02064 180 FAD_synthetase_N FAD synthetase, N-terminal domain 81.12
PLN02388177 phosphopantetheine adenylyltransferase 80.14
>PRK04149 sat sulfate adenylyltransferase; Reviewed Back     alignment and domain information 
Probab=100.00  E-value=4.5e-83  Score=626.18  Aligned_cols=245  Identities=33%  Similarity=0.502  Sum_probs=235.9

Q ss_pred             ccCCCCCceeecccCchhHHHHHHHhccCCeEEeChhhHHHHHHHHhCCcCCCCCCCChhhhhhccccCCeecCCCCeee
Q 021558           53 LIEPDGGKLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVN  132 (311)
Q Consensus        53 li~PhGg~Lv~l~v~~~~~~~l~~ea~~lpsi~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~~~  132 (311)
                      ++.||||+|++|+|+++++++++++|.+||+|.||++++||||||++|+||||+||||++||+||+  ++|||+||++  
T Consensus         3 ~~~phgg~l~~l~v~~~~~~~~~~~a~~lp~i~i~~~~l~dLell~~G~fsPL~GFM~~~d~~sV~--~~~rL~~G~~--   78 (391)
T PRK04149          3 LIPPHGGELVNRVVEGRDREEILEEAESLPRIELDERAASDLEMIAIGGFSPLTGFMGREDYDSVV--EEMRLANGLV--   78 (391)
T ss_pred             CCCCCCCcchhccCCHHHHHHHHHHhccCCEEecCHHHHHHHHHHhcCCccCcccCCCHHHHHHHH--HhCcCCCCCC--
Confidence            568999999999999999999999999999999999999999999999999999999999999999  6999999998  


Q ss_pred             cceeeEEecCHHHHHhcCCCCeEEEeCCCCcEEEEEEeCcccCCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEEeeeE
Q 021558          133 MSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDL  212 (311)
Q Consensus       133 ~piPIvL~v~~e~a~~l~~g~~vaL~~~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~vgG~v  212 (311)
                      |||||||+|+++++++|++|++|+|++ +|+++|+|+|+|+|++||+++|++||||+|++||||++++ +.|+|+|||+|
T Consensus        79 wpiPi~L~v~~e~~~~l~~g~~vaL~~-~G~~va~l~V~evf~~dk~~~a~~vfgt~d~~HPgv~~~~-~~g~~~vgG~i  156 (391)
T PRK04149         79 WSIPITLDVSEEDAASLKEGDEVALVY-KGEPYGVLEVEEIYTYDKKKEAEKVYKTTDEKHPGVKKLY-EQGDVYLAGPV  156 (391)
T ss_pred             cceeEEEeCCHHHHhhCCCCCEEEEee-CCEEEEEEEeeeEecCChHHHHHHHhCCCCcCCchHHHHH-hcCCEEEEeEE
Confidence            899999999999999999999999995 9999999999999999999999999999999999999976 68999999999


Q ss_pred             EEeccCCCCCCCccccCCHHHHHHHHHhcCCCceEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCC
Q 021558          213 EVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKAD  292 (311)
Q Consensus       213 ~~l~~~~~~d~f~~~rltP~e~R~~f~~~Gw~~VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK~d  292 (311)
                      ++++++.+ ++|++||+||+|+|+.|+++||++|+|||||||+|||||+||+    +|+|.+   ++||||||+|+||+|
T Consensus       157 ~~l~~~~~-~~f~~~r~tP~e~r~~f~~~gw~~VvafqTrnP~HraHe~l~~----~a~e~~---d~lll~plvG~~k~~  228 (391)
T PRK04149        157 TLLNRKFH-EPFPRFWLTPAETRELFEEKGWKTVVAFQTRNPPHRAHEYLQK----CALEIV---DGLLLNPLVGETKSG  228 (391)
T ss_pred             EEeecCCC-CCchhhcCCHHHHHHHHHHcCCCeEEEeecCCCCchHHHHHHH----HHHHhc---CeEEEecCcCCCCCC
Confidence            99998775 5799999999999999999999999999999999999999996    678874   799999999999999


Q ss_pred             CCChHHHHHHHHHHHHhhC
Q 021558          293 DVPLSWRMKQHEKVLRLTF  311 (311)
Q Consensus       293 Dvp~~vR~r~ye~ll~ny~  311 (311)
                      |+|+++|||||+++++|||
T Consensus       229 di~~~~r~~~~~~~~~~y~  247 (391)
T PRK04149        229 DIPAEVRMEAYEALLKNYY  247 (391)
T ss_pred             CCCHHHHHHHHHHHHHhcC
Confidence            9999999999999999997

>PRK05537 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Validated Back     alignment and domain information
>COG2046 MET3 ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00339 sopT ATP sulphurylase Back     alignment and domain information
>cd00517 ATPS ATP-sulfurylase Back     alignment and domain information
>KOG4238 consensus Bifunctional ATP sulfurylase/adenosine 5'-phosphosulfate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF14306 PUA_2: PUA-like domain; PDB: 1M8P_C 1I2D_B 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2QJF_A 2OFX_B 1J70_B 1G8F_A Back     alignment and domain information
>KOG0636 consensus ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF01747 ATP-sulfurylase: ATP-sulfurylase; InterPro: IPR002650 This entry consists of sulphate adenylyltransferase or ATP-sulfurylase (2 Back     alignment and domain information
>KOG0636 consensus ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd02169 Citrate_lyase_ligase Citrate lyase ligase Back     alignment and domain information
>cd02039 cytidylyltransferase_like Cytidylyltransferase-like domain Back     alignment and domain information
>PRK13964 coaD phosphopantetheine adenylyltransferase; Provisional Back     alignment and domain information
>cd02163 PPAT Phosphopantetheine adenylyltransferase Back     alignment and domain information
>TIGR01510 coaD_prev_kdtB pantetheine-phosphate adenylyltransferase, bacterial Back     alignment and domain information
>cd02165 NMNAT Nicotinamide/nicotinate mononucleotide adenylyltransferase Back     alignment and domain information
>PLN02945 nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase Back     alignment and domain information
>TIGR00125 cyt_tran_rel cytidyltransferase-related domain Back     alignment and domain information
>PRK00168 coaD phosphopantetheine adenylyltransferase; Provisional Back     alignment and domain information
>TIGR00482 nicotinate (nicotinamide) nucleotide adenylyltransferase Back     alignment and domain information
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase Back     alignment and domain information
>cd02167 NMNAT_NadR Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional NadR-like proteins Back     alignment and domain information
>PRK08887 nicotinic acid mononucleotide adenylyltransferase; Provisional Back     alignment and domain information
>PF01467 CTP_transf_2: Cytidylyltransferase; InterPro: IPR004820 This family includes []: Cholinephosphate cytidyltransferase (P49585 from SWISSPROT) Back     alignment and domain information
>PRK00071 nadD nicotinic acid mononucleotide adenylyltransferase; Provisional Back     alignment and domain information
>PRK01153 nicotinamide-nucleotide adenylyltransferase; Provisional Back     alignment and domain information
>cd02164 PPAT_CoAS phosphopantetheine adenylyltransferase domain of eukaryotic and archaeal bifunctional enzymes Back     alignment and domain information
>cd09286 NMNAT_Eukarya Nicotinamide/nicotinate mononucleotide adenylyltransferase, Eukaryotic Back     alignment and domain information
>TIGR01526 nadR_NMN_Atrans nicotinamide-nucleotide adenylyltransferase, NadR type Back     alignment and domain information
>PRK06973 nicotinic acid mononucleotide adenylyltransferase; Provisional Back     alignment and domain information
>PRK13671 hypothetical protein; Provisional Back     alignment and domain information
>cd02168 NMNAT_Nudix Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional proteins, also containing a Nudix hydrolase domain Back     alignment and domain information
>cd02166 NMNAT_Archaea Nicotinamide/nicotinate mononucleotide adenylyltransferase, archaeal Back     alignment and domain information
>PRK00777 phosphopantetheine adenylyltransferase; Provisional Back     alignment and domain information
>PRK05379 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase; Provisional Back     alignment and domain information
>cd02156 nt_trans nucleotidyl transferase superfamily Back     alignment and domain information
>TIGR01527 arch_NMN_Atrans nicotinamide-nucleotide adenylyltransferase Back     alignment and domain information
>COG1057 NadD Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme Back     alignment and domain information
>PLN02388 phosphopantetheine adenylyltransferase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query311
2qjf_A 405 Crystal Structure Of Atp-Sulfurylase Domain Of Huma 5e-78
1x6v_B 630 The Crystal Structure Of Human 3'-Phosphoadenosine- 2e-77
1g8f_A 511 Atp Sulfurylase From S. Cerevisiae Length = 511 2e-24
1jee_A 510 Crystal Structure Of Atp Sulfurylase In Complex Wit 3e-24
1j70_A 514 Crystal Structure Of Yeast Atp Sulfurylase Length = 3e-24
1r6x_A 395 The Crystal Structure Of A Truncated Form Of Yeast 4e-24
2gks_A 546 Crystal Structure Of The Bi-Functional Atp Sulfuryl 2e-21
1m8p_A 573 Crystal Structure Of P. Chrysogenum Atp Sulfurylase 3e-21
1i2d_A 573 Crystal Structure Of Atp Sulfurylase From Penicilli 4e-21
1v47_A 349 Crystal Structure Of Atp Sulfurylase From Thermus T 2e-12
4dnx_A 397 The Structure Of The Atp Sulfurylase From Allochrom 1e-11
3cr8_A 552 Hexameric Aps Kinase From Thiobacillus Denitrifican 3e-11
1jhd_A 396 Crystal Structure Of Bacterial Atp Sulfurylase From 3e-10
>pdb|2QJF|A Chain A, Crystal Structure Of Atp-Sulfurylase Domain Of Human Paps Synthetase 1 Length = 405 Back     alignment and structure 
Iteration: 1

 Score =  287 bits (735), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 139/248 (56%), Positives = 183/248 (73%), Gaps = 4/248 (1%)
Query: 60  KLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLH 119
           ++ EL V ++   + K +A TLP +++ K+D+QWV VL+EGWA+PL+GFMRE E+LQ LH
Sbjct: 14  EVKELYVPENKLHLAKTDAETLPALKINKVDMQWVQVLAEGWATPLNGFMREREYLQCLH 73
Query: 120 FNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKE 179
           F+ L   DG V+N+SVPIVL    E K R+   T  AL+  +   VAIL + E ++H KE
Sbjct: 74  FDCLL--DGGVINLSVPIVLTATHEDKERLDGCTAFALM-YEGRRVAILRNPEFFEHRKE 130
Query: 180 ERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFS 239
           ER AR WGTT    PY+ + +   G+WLIGGDL+VL+ + ++DGLD++RL+P +L+ +F 
Sbjct: 131 ERCARQWGTTCKNHPYI-KMVMEQGDWLIGGDLQVLDRVYWNDGLDQYRLTPTELKQKFK 189
Query: 240 KRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWR 299
             NADAVFAFQLRNPVHNGHALLM DT ++LLE GY+ P+LLLHPLGG+TK DDVPL WR
Sbjct: 190 DMNADAVFAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHPLGGWTKDDDVPLMWR 249
Query: 300 MKQHEKVL 307
           MKQH  VL
Sbjct: 250 MKQHAAVL 257
>pdb|1X6V|B Chain B, The Crystal Structure Of Human 3'-Phosphoadenosine-5'- Phosphosulfate Synthetase 1 Length = 630 Back     alignment and structure
>pdb|1G8F|A Chain A, Atp Sulfurylase From S. Cerevisiae Length = 511 Back     alignment and structure
>pdb|1JEE|A Chain A, Crystal Structure Of Atp Sulfurylase In Complex With Chlorate Length = 510 Back     alignment and structure
>pdb|1J70|A Chain A, Crystal Structure Of Yeast Atp Sulfurylase Length = 514 Back     alignment and structure
>pdb|1R6X|A Chain A, The Crystal Structure Of A Truncated Form Of Yeast Atp Sulfurylase, Lacking The C-Terminal Aps Kinase-Like Domain, In Complex With Sulfate Length = 395 Back     alignment and structure
>pdb|2GKS|A Chain A, Crystal Structure Of The Bi-Functional Atp Sulfurylase-Aps Kinase From Aquifex Aeolicus, A Chemolithotrophic Thermophile Length = 546 Back     alignment and structure
>pdb|1M8P|A Chain A, Crystal Structure Of P. Chrysogenum Atp Sulfurylase In The T-State Length = 573 Back     alignment and structure
>pdb|1I2D|A Chain A, Crystal Structure Of Atp Sulfurylase From Penicillium Chrysogenum Length = 573 Back     alignment and structure
>pdb|1V47|A Chain A, Crystal Structure Of Atp Sulfurylase From Thermus Thermophillus Hb8 In Complex With Aps Length = 349 Back     alignment and structure
>pdb|4DNX|A Chain A, The Structure Of The Atp Sulfurylase From Allochromatium Vinosum In The Open State Length = 397 Back     alignment and structure
>pdb|3CR8|A Chain A, Hexameric Aps Kinase From Thiobacillus Denitrificans Length = 552 Back     alignment and structure
>pdb|1JHD|A Chain A, Crystal Structure Of Bacterial Atp Sulfurylase From The Riftia Pachyptila Symbiont Length = 396 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query311
1x6v_B 630 Bifunctional 3'-phosphoadenosine 5'- phosphosulfat 1e-115
1m8p_A 573 Sulfate adenylyltransferase; rossmann fold, phosph 2e-81
2gks_A 546 Bifunctional SAT/APS kinase; transferase, sulfuryl 6e-77
3cr8_A 552 Sulfate adenylyltranferase, adenylylsulfate kinase 2e-60
1g8f_A 511 Sulfate adenylyltransferase; alpha-beta protein, b 3e-53
1r6x_A 395 ATP:sulfate adenylyltransferase; APS kinase-like d 5e-52
1jhd_A 396 Sulfate adenylyltransferase; sulfurylase, APS, che 1e-49
1v47_A 349 ATP sulfurylase; product binding complex, zinc, ri 2e-39
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A* Length = 630 Back     alignment and structure
 Score =  344 bits (885), Expect = e-115
 Identities = 141/277 (50%), Positives = 186/277 (67%), Gaps = 4/277 (1%)

Query: 31  TSLSFKQKTTAPHFKLRSIRAGLIEPDGGKLTELIVDKSLRDVRKREAATLPRIRLTKID 90
           T             +L   R  +      ++ EL V ++   + K +A TLP +++ K+D
Sbjct: 204 TDSCDVNDCVQQVVELLQERDIVPVDASYEVKELYVPENKLHLAKTDAETLPALKINKVD 263

Query: 91  LQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIG 150
           +QWV VL+EGWA+PL+GFMRE E+LQ LHF+   L DG V+N+SVPIVL    E K R+ 
Sbjct: 264 MQWVQVLAEGWATPLNGFMREREYLQCLHFD--CLLDGGVINLSVPIVLTATHEDKERLD 321

Query: 151 ESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGG 210
             T  AL+  +   VAIL + E ++H KEER AR WGTT    PY+   +   G+WLIGG
Sbjct: 322 GCTAFALMY-EGRRVAILRNPEFFEHRKEERCARQWGTTCKNHPYIKM-VMEQGDWLIGG 379

Query: 211 DLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRL 270
           DL+VL+ + ++DGLD++RL+P +L+ +F   NADAV AFQLRNPVHNGHALLM DT ++L
Sbjct: 380 DLQVLDRVYWNDGLDQYRLTPTELKQKFKDMNADAVSAFQLRNPVHNGHALLMQDTHKQL 439

Query: 271 LEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVL 307
           LE GY+ P+LLLHPLGG+TK DDVPL WRMKQH  VL
Sbjct: 440 LERGYRRPVLLLHPLGGWTKDDDVPLMWRMKQHAAVL 476
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A* Length = 573 Back     alignment and structure
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus} Length = 546 Back     alignment and structure
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans} Length = 552 Back     alignment and structure
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A* Length = 511 Back     alignment and structure
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 Length = 395 Back     alignment and structure
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5 Length = 396 Back     alignment and structure
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5 Length = 349 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query311
1x6v_B 630 Bifunctional 3'-phosphoadenosine 5'- phosphosulfat 100.0
1r6x_A 395 ATP:sulfate adenylyltransferase; APS kinase-like d 100.0
1g8f_A 511 Sulfate adenylyltransferase; alpha-beta protein, b 100.0
1jhd_A 396 Sulfate adenylyltransferase; sulfurylase, APS, che 100.0
1m8p_A 573 Sulfate adenylyltransferase; rossmann fold, phosph 100.0
2gks_A 546 Bifunctional SAT/APS kinase; transferase, sulfuryl 100.0
1v47_A 349 ATP sulfurylase; product binding complex, zinc, ri 100.0
3cr8_A 552 Sulfate adenylyltranferase, adenylylsulfate kinase 100.0
1qjc_A158 Phosphopantetheine adenylyltransferase; coenzyme A 95.94
1od6_A160 PPAT, phosphopantetheine adenylyltransferase; coen 95.41
3nv7_A157 Phosphopantetheine adenylyltransferase; helicobact 94.65
1vlh_A173 Phosphopantetheine adenylyltransferase; TM0741, st 94.35
1o6b_A 169 Phosphopantetheine adenylyltransferase; structural 93.97
3nd5_A 171 Phosphopantetheine adenylyltransferase; PPAT, coen 93.61
1f9a_A 168 Hypothetical protein MJ0541; alpha/beta, transfera 93.53
3f3m_A 168 Phosphopantetheine adenylyltransferase; PPAT, coen 93.41
4f3r_A162 Phosphopantetheine adenylyltransferase; phosphopan 92.69
3nbk_A177 Phosphopantetheine adenylyltransferase; PPAT, PHP; 92.62
1ej2_A 181 Nicotinamide mononucleotide adenylyltransferase; d 92.46
1kam_A 194 Deamido-NAD(+), nicotinate-nucleotide adenylyltran 91.96
2qtr_A 189 Nicotinate (nicotinamide) nucleotide adenylyltran; 91.82
3k9w_A 187 Phosphopantetheine adenylyltransferase; niaid, ssg 90.81
1k4m_A 213 NAMN adenylyltransferase; nucleotidyltransferase; 90.17
1lw7_A 365 Transcriptional regulator NADR; NMN, NMN adenylyl 90.12
3do8_A148 Phosphopantetheine adenylyltransferase; protein wi 89.93
2qjt_B 352 Nicotinamide-nucleotide adenylyltransferase; two i 89.93
3h05_A 177 Uncharacterized protein VPA0413; nucleotidylyl, tr 88.9
1yum_A 242 'probable nicotinate-nucleotide adenylyltransferas 88.87
1nup_A 252 FKSG76; NAD biosynthesis, mitochondria, pyridine a 87.96
2h29_A 189 Probable nicotinate-nucleotide adenylyltransferase 87.51
2b7l_A132 Glycerol-3-phosphate cytidylyltransferase; rossman 82.89
1kqn_A 279 Nmnat, nicotinamide mononucleotide adenylyl transf 82.31
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A* Back     alignment and structure
Probab=100.00  E-value=7.1e-83  Score=655.39  Aligned_cols=254  Identities=54%  Similarity=0.937  Sum_probs=242.4

Q ss_pred             cCCCCCc--eeecccCchhHHHHHHHhccCCeEEeChhhHHHHHHHHhCCcCCCCCCCChhhhhhccccCCeecCCCCee
Q 021558           54 IEPDGGK--LTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVV  131 (311)
Q Consensus        54 i~PhGg~--Lv~l~v~~~~~~~l~~ea~~lpsi~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~~  131 (311)
                      +.||||+  |++|+|+++++++++++|++||+|.||++++||||||++||||||+||||++||+||+  ++|||+||..+
T Consensus       225 ~ip~G~~~~l~~l~v~~~~~~~~~~~a~~l~~i~l~~~~~~dlell~~G~fsPL~GfM~~~dy~~v~--~~~~l~~g~~~  302 (630)
T 1x6v_B          225 IVPVDASYEVKELYVPENKLHLAKTDAETLPALKINKVDMQWVQVLAEGWATPLNGFMREREYLQCL--HFDCLLDGGVI  302 (630)
T ss_dssp             SSCCCCCCSCCCCBCCGGGHHHHHHHHHTSCEEECCHHHHHHHHHHHHTTTTTCCSSCCHHHHHHHH--HHSEECTTSCE
T ss_pred             cccccCcccceecccChHHHHHHHHhhccCCEEEECHHHHHHHHHHhcCCccCchhhCCHHHHHHHH--HhCEeCCCCee
Confidence            5799966  9999999999999999999999999999999999999999999999999999999999  59999997533


Q ss_pred             ecceeeEEecCHHHHHhcCCCCeEEEeCCCCcEEEEEEeCcccCCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEEeee
Q 021558          132 NMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGD  211 (311)
Q Consensus       132 ~~piPIvL~v~~e~a~~l~~g~~vaL~~~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~vgG~  211 (311)
                      +|||||||+|+++++++|++|++|+| +.+|+++|+|+|+|+|++||++||++||||+|++||||++++ ++|+|+|||+
T Consensus       303 ~~~iPi~L~v~~~~~~~l~~g~~v~L-~~~g~~~a~l~v~e~~~~dk~~~a~~v~gt~d~~HPgv~~~~-~~g~~~vgG~  380 (630)
T 1x6v_B          303 NLSVPIVLTATHEDKERLDGCTAFAL-MYEGRRVAILRNPEFFEHRKEERCARQWGTTCKNHPYIKMVM-EQGDWLIGGD  380 (630)
T ss_dssp             ECCSCCCEEECHHHHHHHTTCSEEEE-EETTEEEEEEEEEEEEECCHHHHHHHHHSCCCTTSHHHHHHH-HSCSEEEEEE
T ss_pred             eeeeEEEEeCCHHHHhhCCCCCEEEE-ccCCeEEEEEEeeEEEecCHHHHHHHHhCCCCCCCcchHHHH-hCCCEEEEeE
Confidence            49999999999999999999999999 569999999999999999999999999999999999999976 5699999999


Q ss_pred             EEEeccCCCCCCCccccCCHHHHHHHHHhcCCCceEEEeeCCCCcchHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCC
Q 021558          212 LEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKA  291 (311)
Q Consensus       212 v~~l~~~~~~d~f~~~rltP~e~R~~f~~~Gw~~VvAFQTRNPlHRaHe~L~k~~~~~ale~~~~~~~LllhPLvG~tK~  291 (311)
                      |++++++.|+|+|++||+||+|+|+.|+++||++|||||||||+|||||+|||.|++.+.+.||++++||||||||+||+
T Consensus       381 i~~l~~~~~~~~~~~~~~tP~e~r~~f~~~gw~~VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll~pl~G~tk~  460 (630)
T 1x6v_B          381 LQVLDRVYWNDGLDQYRLTPTELKQKFKDMNADAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHPLGGWTKD  460 (630)
T ss_dssp             EEECSCCCCCSSCGGGCCCHHHHHHHHHHTTCSEEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEEEEBCSCCCT
T ss_pred             EEEEecCcccccchhhcCCHHHHHHHHHHcCCCeEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEEEEeCcCCCCC
Confidence            99999999998999999999999999999999999999999999999999999887777788899999999999999999


Q ss_pred             CCCChHHHHHHHHHHHH-hhC
Q 021558          292 DDVPLSWRMKQHEKVLR-LTF  311 (311)
Q Consensus       292 dDvp~~vR~r~ye~ll~-ny~  311 (311)
                      ||||+++||+||+++++ |||
T Consensus       461 ~di~~~~r~~~~~~~~~~~y~  481 (630)
T 1x6v_B          461 DDVPLMWRMKQHAAVLEEGVL  481 (630)
T ss_dssp             TSCCHHHHHHHHHHHHHTTSS
T ss_pred             CCCCHHHHHHHHHHHHHcCCC
Confidence            99999999999999999 786
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 Back     alignment and structure
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A* Back     alignment and structure
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5 Back     alignment and structure
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A* Back     alignment and structure
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus} Back     alignment and structure
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5 Back     alignment and structure
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans} Back     alignment and structure
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A Back     alignment and structure
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3 Back     alignment and structure
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A* Back     alignment and structure
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3 Back     alignment and structure
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3 Back     alignment and structure
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A* Back     alignment and structure
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3 Back     alignment and structure
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0 Back     alignment and structure
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii} Back     alignment and structure
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A* Back     alignment and structure
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A* Back     alignment and structure
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A* Back     alignment and structure
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A* Back     alignment and structure
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A* Back     alignment and structure
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A* Back     alignment and structure
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1 Back     alignment and structure
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus} Back     alignment and structure
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B Back     alignment and structure
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus} Back     alignment and structure
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A* Back     alignment and structure
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A* Back     alignment and structure
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A* Back     alignment and structure
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus} Back     alignment and structure
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 311
d1g8fa1167 b.122.1.3 (A:2-168) ATP sulfurylase N-terminal dom 7e-45
d1x6va1161 b.122.1.3 (A:229-389) ATP sulfurylase N-terminal d 3e-44
d1m8pa1170 b.122.1.3 (A:1-170) ATP sulfurylase N-terminal dom 7e-44
d1jhda1173 b.122.1.3 (A:1-173) ATP sulfurylase N-terminal dom 8e-37
d1v47a1132 b.122.1.3 (A:4-135) ATP sulfurylase N-terminal dom 2e-34
d1x6va2 235 c.26.1.5 (A:390-624) ATP sulfurylase catalytic dom 1e-29
d1g8fa2 221 c.26.1.5 (A:169-389) ATP sulfurylase catalytic dom 8e-21
d1v47a2 214 c.26.1.5 (A:136-349) ATP sulfurylase catalytic dom 5e-20
d1jhda2 223 c.26.1.5 (A:174-396) ATP sulfurylase catalytic dom 1e-17
>d1g8fa1 b.122.1.3 (A:2-168) ATP sulfurylase N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 167 Back     information, alignment and structure

class: All beta proteins
fold: PUA domain-like
superfamily: PUA domain-like
family: ATP sulfurylase N-terminal domain
domain: ATP sulfurylase N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  148 bits (375), Expect = 7e-45
 Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 8/170 (4%)

Query: 56  PDGGKLTELIVDKSLRD---VRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRES 112
           P GG L +LI   +L+    + + +++ +    LT   L  + ++  G  SPL+GF+ E+
Sbjct: 3   PHGGILQDLIARDALKKNELLSEAQSSDILVWNLTPRQLCDIELILNGGFSPLTGFLNEN 62

Query: 113 EFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIE 172
           ++   +  +  RL DG++   ++PI L +D+    +I   TR+AL   D+  +AIL   +
Sbjct: 63  DYSSVVTDS--RLADGTL--WTIPITLDVDEAFANQIKPDTRIALFQDDEIPIAILTVQD 118

Query: 173 IYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHD 222
           +YK  K     R +    P  P +      AG++ +GG LE ++  +++D
Sbjct: 119 VYKPNKTIEAERVFRGD-PEHPAISYLFNVAGDYYVGGSLEAIQLPQHYD 167
>d1x6va1 b.122.1.3 (A:229-389) ATP sulfurylase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 161 Back     information, alignment and structure
>d1m8pa1 b.122.1.3 (A:1-170) ATP sulfurylase N-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Length = 170 Back     information, alignment and structure
>d1jhda1 b.122.1.3 (A:1-173) ATP sulfurylase N-terminal domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]} Length = 173 Back     information, alignment and structure
>d1v47a1 b.122.1.3 (A:4-135) ATP sulfurylase N-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 132 Back     information, alignment and structure
>d1x6va2 c.26.1.5 (A:390-624) ATP sulfurylase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 235 Back     information, alignment and structure
>d1g8fa2 c.26.1.5 (A:169-389) ATP sulfurylase catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221 Back     information, alignment and structure
>d1v47a2 c.26.1.5 (A:136-349) ATP sulfurylase catalytic domain {Thermus thermophilus [TaxId: 274]} Length = 214 Back     information, alignment and structure
>d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]} Length = 223 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query311
d1g8fa1167 ATP sulfurylase N-terminal domain {Baker's yeast ( 100.0
d1m8pa1170 ATP sulfurylase N-terminal domain {Fungus (Penicil 100.0
d1x6va1161 ATP sulfurylase N-terminal domain {Human (Homo sap 100.0
d1jhda1173 ATP sulfurylase N-terminal domain {Sulfur-oxidizin 100.0
d1v47a1132 ATP sulfurylase N-terminal domain {Thermus thermop 100.0
d1x6va2 235 ATP sulfurylase catalytic domain {Human (Homo sapi 99.96
d1v47a2 214 ATP sulfurylase catalytic domain {Thermus thermoph 99.95
d1g8fa2 221 ATP sulfurylase catalytic domain {Baker's yeast (S 99.95
d1jhda2 223 ATP sulfurylase catalytic domain {Sulfur-oxidizing 99.68
d1od6a_160 Phosphopantetheine adenylyltransferase {Thermus th 93.58
d1ej2a_ 167 Nicotinamide mononucleotide (NMN) adenylyltransfer 93.29
d1f9aa_164 Nicotinamide mononucleotide (NMN) adenylyltransfer 92.94
d1o6ba_ 163 Phosphopantetheine adenylyltransferase {Bacillus s 91.86
d1qjca_157 Phosphopantetheine adenylyltransferase {Escherichi 91.72
d1k4ma_ 213 Nicotinamide mononucleotide (NMN) adenylyltransfer 91.7
d1kr2a_ 271 Nicotinamide mononucleotide (NMN) adenylyltransfer 91.46
d1vlha_157 Phosphopantetheine adenylyltransferase {Thermotoga 89.12
d1kama_ 189 Nicotinamide mononucleotide (NMN) adenylyltransfer 89.05
d1lw7a1163 Transcriptional regulator NadR, NMN-adenylyltransf 88.38
d1nuua_ 233 Cytosolic NMN/NAMN adenylyltransferase {Human (Hom 87.47
d1tfua_157 Phosphopantetheine adenylyltransferase {Mycobacter 87.43
>d1g8fa1 b.122.1.3 (A:2-168) ATP sulfurylase N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All beta proteins
fold: PUA domain-like
superfamily: PUA domain-like
family: ATP sulfurylase N-terminal domain
domain: ATP sulfurylase N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.4e-54  Score=373.64  Aligned_cols=164  Identities=29%  Similarity=0.484  Sum_probs=152.1

Q ss_pred             cCCCCCceeecccC-chhHHHHHHHh--ccCCeEEeChhhHHHHHHHHhCCcCCCCCCCChhhhhhccccCCeecCCCCe
Q 021558           54 IEPDGGKLTELIVD-KSLRDVRKREA--ATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSV  130 (311)
Q Consensus        54 i~PhGg~Lv~l~v~-~~~~~~l~~ea--~~lpsi~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~  130 (311)
                      +.||||+|++|+++ +.+++++.++|  ..||+|.|+++|+||||||++|+||||+||||++||+||+  ++|||.||.+
T Consensus         1 p~PHGG~L~~l~~~~~~~~~~l~~~a~a~~l~~~~l~~~~~~dle~l~~G~fsPL~GFM~~~d~~sV~--~~mrL~~G~~   78 (167)
T d1g8fa1           1 PAPHGGILQDLIARDALKKNELLSEAQSSDILVWNLTPRQLCDIELILNGGFSPLTGFLNENDYSSVV--TDSRLADGTL   78 (167)
T ss_dssp             CCCTTSSCCCHHHHTGGGHHHHHHHHTCTTSEEEECCHHHHHHHHHHHTTTTTTCCEECCHHHHHHHH--HHSBCTTCCB
T ss_pred             CcCCCccchhcccCcHHHHHHHHHhhhccCCceeeCCHHHHHHHHHHhcCCCCCccccccHHHHHHHH--HhCcCCCCCc
Confidence            36999999999995 45666665555  4689999999999999999999999999999999999999  6999999999


Q ss_pred             eecceeeEEecCHHHHHhcCCCCeEEEeCCCCcEEEEEEeCcccCCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEEee
Q 021558          131 VNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGG  210 (311)
Q Consensus       131 ~~~piPIvL~v~~e~a~~l~~g~~vaL~~~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~vgG  210 (311)
                        |||||+|+|+++++++++.|++|+|+|++|.++|+|+|+|+|++||+++|++|||| |++||||+++++..|+|+|||
T Consensus        79 --wpiPI~L~v~~~~~~~i~~g~~iaL~~~~g~~ia~l~v~~i~~~dk~~~a~~vf~T-D~~HPGV~~~~~~~g~~~vgG  155 (167)
T d1g8fa1          79 --WTIPITLDVDEAFANQIKPDTRIALFQDDEIPIAILTVQDVYKPNKTIEAERVFRG-DPEHPAISYLFNVAGDYYVGG  155 (167)
T ss_dssp             --CCSCCCEEECHHHHTTCCTTCEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHCS-CTTSHHHHHHHHTSCSEEEEE
T ss_pred             --CCccEEEeccHHHHhhccCCcEEEEEcCCCcceeeecccccccccHHHHHHHHhcC-CCCChHHHHHHhhcCCEEEeC
Confidence              89999999999999999999999999989999999999999999999999999987 899999999887789999999


Q ss_pred             eEEEeccCCCCC
Q 021558          211 DLEVLEPIKYHD  222 (311)
Q Consensus       211 ~v~~l~~~~~~d  222 (311)
                      +|+++++|+|+|
T Consensus       156 ~i~~l~~p~h~D  167 (167)
T d1g8fa1         156 SLEAIQLPQHYD  167 (167)
T ss_dssp             EEEESCCCCCCS
T ss_pred             EEEEecCCCCCC
Confidence            999999998864
>d1m8pa1 b.122.1.3 (A:1-170) ATP sulfurylase N-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d1x6va1 b.122.1.3 (A:229-389) ATP sulfurylase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jhda1 b.122.1.3 (A:1-173) ATP sulfurylase N-terminal domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]} Back     information, alignment and structure
>d1v47a1 b.122.1.3 (A:4-135) ATP sulfurylase N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1x6va2 c.26.1.5 (A:390-624) ATP sulfurylase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v47a2 c.26.1.5 (A:136-349) ATP sulfurylase catalytic domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1g8fa2 c.26.1.5 (A:169-389) ATP sulfurylase catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]} Back     information, alignment and structure
>d1od6a_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kr2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vlha_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1lw7a1 c.26.1.3 (A:57-219) Transcriptional regulator NadR, NMN-adenylyltransferase domain {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1nuua_ c.26.1.3 (A:) Cytosolic NMN/NAMN adenylyltransferase {Human (Homo sapiens), FKSG76 [TaxId: 9606]} Back     information, alignment and structure
>d1tfua_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure