Citrus Sinensis ID: 021762
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 308 | ||||||
| 225429458 | 465 | PREDICTED: ferrochelatase-2, chloroplast | 0.918 | 0.608 | 0.662 | 1e-105 | |
| 1170239 | 514 | RecName: Full=Ferrochelatase-2, chloropl | 0.948 | 0.568 | 0.636 | 1e-100 | |
| 328727190 | 487 | ferrochelatase isoform I [Nicotiana taba | 0.837 | 0.529 | 0.664 | 3e-97 | |
| 356506948 | 481 | PREDICTED: ferrochelatase-2, chloroplast | 0.831 | 0.532 | 0.683 | 5e-97 | |
| 147818793 | 445 | hypothetical protein VITISV_021593 [Viti | 0.698 | 0.483 | 0.797 | 5e-97 | |
| 356514581 | 482 | PREDICTED: ferrochelatase-2, chloroplast | 0.818 | 0.522 | 0.688 | 6e-97 | |
| 255640257 | 459 | unknown [Glycine max] | 0.831 | 0.557 | 0.680 | 2e-96 | |
| 255550838 | 480 | ferrochelatase, putative [Ricinus commun | 0.762 | 0.489 | 0.725 | 1e-95 | |
| 224092212 | 412 | predicted protein [Populus trichocarpa] | 0.730 | 0.546 | 0.75 | 2e-95 | |
| 115478416 | 482 | Os09g0297000 [Oryza sativa Japonica Grou | 0.801 | 0.512 | 0.674 | 8e-92 |
| >gi|225429458|ref|XP_002277290.1| PREDICTED: ferrochelatase-2, chloroplastic [Vitis vinifera] gi|296081616|emb|CBI20621.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/296 (66%), Positives = 231/296 (78%), Gaps = 13/296 (4%)
Query: 1 MDAASCSGVLSRAKLPVSNLHKFNQTLGSHIVSVSCQSSEGLNNVNRVSSQALAYTVRES 60
M+A S S +L K+ N FNQ S+SC + + + SS+ L + S
Sbjct: 1 MEAVSTSSILPHGKVSGLNHRSFNQK-----SSMSCPQTRSFKSAHCYSSEGL----KGS 51
Query: 61 YLCGPVQRRNPAG--ICAAGVATYGENAVEYESHAQAAEDKVGVLLLNLGGPDTLHDVQP 118
L +++RNP G +AG TY +AVE +HA E+KVGVLLLNLGGP+TLHDVQP
Sbjct: 52 QLLNSIEKRNPVGQTFSSAGAYTYVGSAVESPTHA--VEEKVGVLLLNLGGPETLHDVQP 109
Query: 119 FLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQA 178
FLFNLFADPDIIRLPRLF+FLQ PLA+LISV+RAPKSKEGYAAIGGGSPLRKITDEQA A
Sbjct: 110 FLFNLFADPDIIRLPRLFQFLQRPLAQLISVIRAPKSKEGYAAIGGGSPLRKITDEQAHA 169
Query: 179 LKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRV 238
+K ALEAKN+ VNVYVGMRYWYPFTEEA++QIK+D+ITRLVVLPLYPQFSISTTGSSIRV
Sbjct: 170 IKAALEAKNMHVNVYVGMRYWYPFTEEAIEQIKKDKITRLVVLPLYPQFSISTTGSSIRV 229
Query: 239 LQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVSFIVVAY 294
L++IFREDAYLSRLPVSII+ WYQR+GY+NSMADLI++EL F KP+EV A+
Sbjct: 230 LESIFREDAYLSRLPVSIIQCWYQRQGYINSMADLIEEELQIFSKPKEVMIFFSAH 285
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|1170239|sp|P42044.1|HEMH_CUCSA RecName: Full=Ferrochelatase-2, chloroplastic; AltName: Full=Ferrochelatase II; AltName: Full=Heme synthase 2; AltName: Full=Protoheme ferro-lyase 2; Flags: Precursor gi|474968|dbj|BAA05102.1| ferrochelatase [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|328727190|gb|AEB38782.1| ferrochelatase isoform I [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
| >gi|356506948|ref|XP_003522235.1| PREDICTED: ferrochelatase-2, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|147818793|emb|CAN67281.1| hypothetical protein VITISV_021593 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356514581|ref|XP_003525984.1| PREDICTED: ferrochelatase-2, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255640257|gb|ACU20419.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255550838|ref|XP_002516467.1| ferrochelatase, putative [Ricinus communis] gi|223544287|gb|EEF45808.1| ferrochelatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224092212|ref|XP_002309511.1| predicted protein [Populus trichocarpa] gi|222855487|gb|EEE93034.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|115478416|ref|NP_001062803.1| Os09g0297000 [Oryza sativa Japonica Group] gi|75322957|sp|Q69TB1.1|HEMH1_ORYSJ RecName: Full=Ferrochelatase-1, chloroplastic; AltName: Full=Ferrochelatase I; AltName: Full=Heme synthase 1; AltName: Full=Protoheme ferro-lyase 1; Flags: Precursor gi|50725080|dbj|BAD33213.1| putative ferrochelatase [Oryza sativa Japonica Group] gi|113631036|dbj|BAF24717.1| Os09g0297000 [Oryza sativa Japonica Group] gi|215686920|dbj|BAG90790.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 308 | ||||||
| TAIR|locus:2180642 | 466 | FC1 "ferrochelatase 1" [Arabid | 0.701 | 0.463 | 0.741 | 2.4e-83 | |
| UNIPROTKB|P22600 | 416 | FECH "Ferrochelatase, mitochon | 0.782 | 0.579 | 0.345 | 9.8e-32 | |
| RGD|1307556 | 388 | Fech "ferrochelatase" [Rattus | 0.675 | 0.536 | 0.369 | 9.8e-32 | |
| UNIPROTKB|E1C7D2 | 413 | FECH "Ferrochelatase, mitochon | 0.691 | 0.515 | 0.342 | 2e-31 | |
| UNIPROTKB|F1NBT4 | 402 | FECH "Ferrochelatase, mitochon | 0.691 | 0.529 | 0.342 | 2e-31 | |
| UNIPROTKB|O42479 | 402 | FECH "Ferrochelatase, mitochon | 0.691 | 0.529 | 0.342 | 2e-31 | |
| UNIPROTKB|P22830 | 423 | FECH "Ferrochelatase, mitochon | 0.775 | 0.565 | 0.335 | 3.3e-31 | |
| MGI|MGI:95513 | 420 | Fech "ferrochelatase" [Mus mus | 0.866 | 0.635 | 0.308 | 4.2e-31 | |
| TIGR_CMR|GSU_3312 | 317 | GSU_3312 "ferrochelatase" [Geo | 0.620 | 0.602 | 0.383 | 8.8e-31 | |
| UNIPROTKB|F1P9A3 | 423 | FECH "Ferrochelatase" [Canis l | 0.662 | 0.482 | 0.356 | 4.9e-30 |
| TAIR|locus:2180642 FC1 "ferrochelatase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 161/217 (74%), Positives = 187/217 (86%)
Query: 78 GVATYGENAVEYESHAQAAEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFR 137
G +Y E + + SH AEDK+GVLLLNLGGP+TL+DVQPFL+NLFADPDIIRLPR F+
Sbjct: 69 GDCSYDETSAKARSHV-VAEDKIGVLLLNLGGPETLNDVQPFLYNLFADPDIIRLPRPFQ 127
Query: 138 FLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMR 197
FLQ +AK ISVVRAPKSKEGYAAIGGGSPLRKITDEQA A+K +L+AKN+ NVYVGMR
Sbjct: 128 FLQGTIAKFISVVRAPKSKEGYAAIGGGSPLRKITDEQADAIKMSLQAKNIAANVYVGMR 187
Query: 198 YWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSII 257
YWYPFTEEAVQQIK+D+ITRLVVLPLYPQ+SISTTGSSIRVLQ++FR+D YL+ +PV+II
Sbjct: 188 YWYPFTEEAVQQIKKDKITRLVVLPLYPQYSISTTGSSIRVLQDLFRKDPYLAGVPVAII 247
Query: 258 RSWYQREGYVNSMADLIQKELGKFQKPEEVSFIVVAY 294
+SWYQR GYVNSMADLI+KEL F P+EV A+
Sbjct: 248 KSWYQRRGYVNSMADLIEKELQTFSDPKEVMIFFSAH 284
|
|
| UNIPROTKB|P22600 FECH "Ferrochelatase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| RGD|1307556 Fech "ferrochelatase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C7D2 FECH "Ferrochelatase, mitochondrial" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NBT4 FECH "Ferrochelatase, mitochondrial" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O42479 FECH "Ferrochelatase, mitochondrial" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P22830 FECH "Ferrochelatase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:95513 Fech "ferrochelatase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|GSU_3312 GSU_3312 "ferrochelatase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P9A3 FECH "Ferrochelatase" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 308 | |||
| PLN02449 | 485 | PLN02449, PLN02449, ferrochelatase | 1e-133 | |
| PRK00035 | 333 | PRK00035, hemH, ferrochelatase; Reviewed | 5e-77 | |
| pfam00762 | 311 | pfam00762, Ferrochelatase, Ferrochelatase | 4e-74 | |
| TIGR00109 | 322 | TIGR00109, hemH, ferrochelatase | 4e-72 | |
| COG0276 | 320 | COG0276, HemH, Protoheme ferro-lyase (ferrochelata | 1e-70 | |
| cd03411 | 159 | cd03411, Ferrochelatase_N, Ferrochelatase, N-termi | 9e-68 | |
| PRK12435 | 311 | PRK12435, PRK12435, ferrochelatase; Provisional | 1e-18 | |
| cd03409 | 101 | cd03409, Chelatase_Class_II, Class II Chelatase: a | 2e-05 |
| >gnl|CDD|178068 PLN02449, PLN02449, ferrochelatase | Back alignment and domain information |
|---|
Score = 387 bits (995), Expect = e-133
Identities = 160/263 (60%), Positives = 190/263 (72%), Gaps = 4/263 (1%)
Query: 32 VSVSCQSSEGLNNVNRVSSQALAYTVRESYLCGPVQRRNPAGICAAGVATYGENAVEYES 91
S+S SS +LA ++ A +A ++
Sbjct: 26 RSLSLIQCVSSFRSASSSSSSLALRSSSL----RLRANLAASSTSASAVDSPDDDEAVAD 81
Query: 92 HAQAAEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVR 151
H + +E+KVGVLLLNLGGP+TL DVQPFL+NLFADPDIIRLPRLFRFLQ PLA+ IS +R
Sbjct: 82 HPKVSEEKVGVLLLNLGGPETLDDVQPFLYNLFADPDIIRLPRLFRFLQKPLAQFISNLR 141
Query: 152 APKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIK 211
APKSKEGYA+IGGGSPLRKITDEQA+AL ALEAKNLP VYVGMRYW+PFTEEA+ QIK
Sbjct: 142 APKSKEGYASIGGGSPLRKITDEQAEALAKALEAKNLPAKVYVGMRYWHPFTEEAIDQIK 201
Query: 212 RDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMA 271
D IT+LVVLPLYPQFSIST+GSS+R+L++IFRED YL + ++I SWYQREGYV +MA
Sbjct: 202 ADGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYVKAMA 261
Query: 272 DLIQKELGKFQKPEEVSFIVVAY 294
DLI+KEL KF PEEV A+
Sbjct: 262 DLIKKELAKFSDPEEVHIFFSAH 284
|
Length = 485 |
| >gnl|CDD|234585 PRK00035, hemH, ferrochelatase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|216106 pfam00762, Ferrochelatase, Ferrochelatase | Back alignment and domain information |
|---|
| >gnl|CDD|232827 TIGR00109, hemH, ferrochelatase | Back alignment and domain information |
|---|
| >gnl|CDD|223353 COG0276, HemH, Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|239504 cd03411, Ferrochelatase_N, Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway | Back alignment and domain information |
|---|
| >gnl|CDD|183526 PRK12435, PRK12435, ferrochelatase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|239503 cd03409, Chelatase_Class_II, Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 308 | |||
| PLN02449 | 485 | ferrochelatase | 100.0 | |
| KOG1321 | 395 | consensus Protoheme ferro-lyase (ferrochelatase) [ | 100.0 | |
| COG0276 | 320 | HemH Protoheme ferro-lyase (ferrochelatase) [Coenz | 100.0 | |
| PF00762 | 316 | Ferrochelatase: Ferrochelatase; InterPro: IPR00101 | 100.0 | |
| TIGR00109 | 322 | hemH ferrochelatase. Human ferrochelatase, found a | 100.0 | |
| PRK00035 | 333 | hemH ferrochelatase; Reviewed | 100.0 | |
| PRK12435 | 311 | ferrochelatase; Provisional | 100.0 | |
| cd03411 | 159 | Ferrochelatase_N Ferrochelatase, N-terminal domain | 100.0 | |
| cd03409 | 101 | Chelatase_Class_II Class II Chelatase: a family of | 99.31 | |
| cd03414 | 117 | CbiX_SirB_C Sirohydrochlorin cobalt chelatase (Cbi | 98.83 | |
| PLN02757 | 154 | sirohydrochlorine ferrochelatase | 98.77 | |
| PRK00923 | 126 | sirohydrochlorin cobaltochelatase; Reviewed | 98.76 | |
| cd03415 | 125 | CbiX_CbiC Archaeal sirohydrochlorin cobalt chelata | 98.61 | |
| PRK02395 | 279 | hypothetical protein; Provisional | 98.41 | |
| PF01903 | 105 | CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin | 98.3 | |
| cd03412 | 127 | CbiK_N Anaerobic cobalamin biosynthetic cobalt che | 98.27 | |
| PRK05782 | 335 | bifunctional sirohydrochlorin cobalt chelatase/pre | 98.19 | |
| cd03416 | 101 | CbiX_SirB_N Sirohydrochlorin cobalt chelatase (Cbi | 97.85 | |
| TIGR00109 | 322 | hemH ferrochelatase. Human ferrochelatase, found a | 97.8 | |
| PRK00035 | 333 | hemH ferrochelatase; Reviewed | 97.73 | |
| cd03413 | 103 | CbiK_C Anaerobic cobalamin biosynthetic cobalt che | 97.72 | |
| PLN02449 | 485 | ferrochelatase | 97.69 | |
| COG2138 | 245 | Sirohydrochlorin ferrochelatase [Inorganic ion tra | 97.65 | |
| PF00762 | 316 | Ferrochelatase: Ferrochelatase; InterPro: IPR00101 | 97.5 | |
| PRK02395 | 279 | hypothetical protein; Provisional | 97.42 | |
| PRK12435 | 311 | ferrochelatase; Provisional | 97.32 | |
| cd00419 | 135 | Ferrochelatase_C Ferrochelatase, C-terminal domain | 96.75 | |
| PF06180 | 262 | CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 | 96.71 | |
| COG0276 | 320 | HemH Protoheme ferro-lyase (ferrochelatase) [Coenz | 96.66 | |
| PF06180 | 262 | CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 | 96.42 | |
| KOG1321 | 395 | consensus Protoheme ferro-lyase (ferrochelatase) [ | 95.31 | |
| COG4822 | 265 | CbiK Cobalamin biosynthesis protein CbiK, Co2+ che | 92.2 | |
| TIGR00640 | 132 | acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal | 84.17 |
| >PLN02449 ferrochelatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-63 Score=493.17 Aligned_cols=218 Identities=70% Similarity=1.123 Sum_probs=203.8
Q ss_pred ccccccccCCCceEEEEEccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccchhhHHhhcccCCCCc
Q 021762 88 EYESHAQAAEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSP 167 (308)
Q Consensus 88 ~~~~~~~~~~~K~aVLLlNlGgPes~~dV~~FL~n~f~D~~VI~lP~~~~~~~~~L~~~Ia~~R~~ks~~~Y~~IGggSP 167 (308)
...++.+.+++|+||||+|||||++++||++||+|||+||+||++|+++|++|++|+.+|+++|++|++++|++||||||
T Consensus 78 ~~~~~~~~~~~k~gVLLlNlGgPes~~dV~pFL~nlfsD~~II~lP~~~~~~~~~La~~Ia~~R~~ks~~~Y~~IGGgSP 157 (485)
T PLN02449 78 AVADHPKVSEEKVGVLLLNLGGPETLDDVQPFLYNLFADPDIIRLPRLFRFLQKPLAQFISNLRAPKSKEGYASIGGGSP 157 (485)
T ss_pred cccccccccCCceEEEEEeCCCCCChhHHHHHHHHhcCCCCeeeCchhhhHHHHHHHHHHhccCcHHHHHHHHHCCCCCc
Confidence 44566666788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHhc
Q 021762 168 LRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDA 247 (308)
Q Consensus 168 L~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~~ 247 (308)
|+++|++|+++|+++|++.+.+++|++|||||+|+|+|++++|+++|+++||+||||||||.+||||+++.+++++++..
T Consensus 158 L~~iT~~Qa~~Lq~~L~~~~~~~~V~~aMRY~~P~iedal~~l~~~G~~~iVvLPLYPQyS~sTtgSs~~~l~~~~~~~~ 237 (485)
T PLN02449 158 LRKITDEQAEALAKALEAKNLPAKVYVGMRYWHPFTEEAIDQIKADGITKLVVLPLYPQFSISTSGSSLRLLESIFREDE 237 (485)
T ss_pred hHHHHHHHHHHHHHHHhccCCCeEEEEhhhcCCCCHHHHHHHHHhcCCCeEEEEECCcccccccHHHHHHHHHHHHhhcc
Confidence 99999999999999998877899999999999999999999999999999999999999999999999999999988765
Q ss_pred cCCCCCeEEccCCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEEeCCCCchhhhhcC
Q 021762 248 YLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVSFIVVAYTFCMVPLQKFG 305 (308)
Q Consensus 248 ~~~~i~v~~I~~~~~~p~YI~a~a~~I~e~l~~~~~~~~~~LLFSaHglP~r~v~~~~ 305 (308)
....+++++|++||++|+||+|++++|++++++++++++++|||||||||+++++++|
T Consensus 238 ~~~~~~~~~I~~~~~~p~yI~A~a~~I~~~l~~~~~~~~~~LlFSAHGlP~~~v~~~G 295 (485)
T PLN02449 238 YLVNMQHTVIPSWYQREGYVKAMADLIKKELAKFSDPEEVHIFFSAHGVPVSYVEEAG 295 (485)
T ss_pred cccCCeeEEeccccCChHHHHHHHHHHHHHHHhccCcCCcEEEEecCCChhhhhhhcC
Confidence 4345689999999999999999999999999887666778999999999999997666
|
|
| >KOG1321 consensus Protoheme ferro-lyase (ferrochelatase) [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
| >COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PF00762 Ferrochelatase: Ferrochelatase; InterPro: IPR001015 Synonym(s): Protohaem ferro-lyase, Iron chelatase, etc | Back alignment and domain information |
|---|
| >TIGR00109 hemH ferrochelatase | Back alignment and domain information |
|---|
| >PRK00035 hemH ferrochelatase; Reviewed | Back alignment and domain information |
|---|
| >PRK12435 ferrochelatase; Provisional | Back alignment and domain information |
|---|
| >cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway | Back alignment and domain information |
|---|
| >cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings | Back alignment and domain information |
|---|
| >cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain | Back alignment and domain information |
|---|
| >PLN02757 sirohydrochlorine ferrochelatase | Back alignment and domain information |
|---|
| >PRK00923 sirohydrochlorin cobaltochelatase; Reviewed | Back alignment and domain information |
|---|
| >cd03415 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelatase (CbiX) single domain | Back alignment and domain information |
|---|
| >PRK02395 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
| >cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain | Back alignment and domain information |
|---|
| >PRK05782 bifunctional sirohydrochlorin cobalt chelatase/precorrin-8X methylmutase; Validated | Back alignment and domain information |
|---|
| >cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain | Back alignment and domain information |
|---|
| >TIGR00109 hemH ferrochelatase | Back alignment and domain information |
|---|
| >PRK00035 hemH ferrochelatase; Reviewed | Back alignment and domain information |
|---|
| >cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain | Back alignment and domain information |
|---|
| >PLN02449 ferrochelatase | Back alignment and domain information |
|---|
| >COG2138 Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF00762 Ferrochelatase: Ferrochelatase; InterPro: IPR001015 Synonym(s): Protohaem ferro-lyase, Iron chelatase, etc | Back alignment and domain information |
|---|
| >PRK02395 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK12435 ferrochelatase; Provisional | Back alignment and domain information |
|---|
| >cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway | Back alignment and domain information |
|---|
| >PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ] | Back alignment and domain information |
|---|
| >COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ] | Back alignment and domain information |
|---|
| >KOG1321 consensus Protoheme ferro-lyase (ferrochelatase) [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
| >COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 308 | ||||
| 2po7_A | 359 | Crystal Structure Of Human Ferrochelatase Mutant Wi | 2e-31 | ||
| 2po5_A | 359 | Crystal Structure Of Human Ferrochelatase Mutant Wi | 3e-27 | ||
| 4f4d_A | 359 | F337r Variant Of Human Ferrochelatase Length = 359 | 5e-27 | ||
| 2hre_A | 359 | Structure Of Human Ferrochelatase Variant E343k Wit | 5e-27 | ||
| 2qd3_A | 359 | Wild Type Human Ferrochelatase Crystallized With Am | 5e-27 | ||
| 2qd2_A | 359 | F110a Variant Of Human Ferrochelatase With Protohem | 8e-27 | ||
| 1l8x_A | 362 | Crystal Structure Of Ferrochelatase From The Yeast, | 2e-26 | ||
| 3aqi_A | 359 | H240a Variant Of Human Ferrochelatase Length = 359 | 4e-26 | ||
| 2pnj_A | 359 | Crystal Structure Of Human Ferrochelatase Mutant Wi | 4e-26 | ||
| 1hrk_A | 359 | Crystal Structure Of Human Ferrochelatase Length = | 5e-26 | ||
| 3goq_A | 310 | Crystal Structure Of The Tyr13met Variant Of Bacill | 1e-12 | ||
| 2ac4_A | 309 | Crystal Structure Of The His183cys Mutant Variant O | 1e-12 | ||
| 2ac2_A | 309 | Crystal Structure Of The Tyr13phe Mutant Variant Of | 2e-12 | ||
| 2q3j_A | 309 | Crystal Structure Of The His183ala Variant Of Bacil | 3e-12 | ||
| 2h1w_A | 310 | Crystal Structure Of The His183ala Mutant Variant O | 3e-12 | ||
| 1c1h_A | 310 | Crystal Structure Of Bacillus Subtilis Ferrochelata | 3e-12 | ||
| 1doz_A | 309 | Crystal Structure Of Ferrochelatase Length = 309 | 3e-12 | ||
| 1c9e_A | 306 | Structure Of Ferrochelatase With Copper(Ii) N- Meth | 3e-12 | ||
| 2h1v_A | 310 | Crystal Structure Of The Lys87ala Mutant Variant Of | 9e-12 | ||
| 2c8j_A | 311 | Crystal Structure Of Ferrochelatase Hemh-1 From Bac | 9e-11 |
| >pdb|2PO7|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With His 341 Replaced By Cys Length = 359 | Back alignment and structure |
|
| >pdb|2PO5|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With His 263 Replaced By Cys Length = 359 | Back alignment and structure |
| >pdb|4F4D|A Chain A, F337r Variant Of Human Ferrochelatase Length = 359 | Back alignment and structure |
| >pdb|2HRE|A Chain A, Structure Of Human Ferrochelatase Variant E343k With Protoporphyrin Ix Bound Length = 359 | Back alignment and structure |
| >pdb|2QD3|A Chain A, Wild Type Human Ferrochelatase Crystallized With Ammonium Sulfate Length = 359 | Back alignment and structure |
| >pdb|2QD2|A Chain A, F110a Variant Of Human Ferrochelatase With Protoheme Bound Length = 359 | Back alignment and structure |
| >pdb|1L8X|A Chain A, Crystal Structure Of Ferrochelatase From The Yeast, Saccharomyces Cerevisiae, With Cobalt(Ii) As The Substrate Ion Length = 362 | Back alignment and structure |
| >pdb|3AQI|A Chain A, H240a Variant Of Human Ferrochelatase Length = 359 | Back alignment and structure |
| >pdb|2PNJ|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With Phe 337 Replaced By Ala Length = 359 | Back alignment and structure |
| >pdb|1HRK|A Chain A, Crystal Structure Of Human Ferrochelatase Length = 359 | Back alignment and structure |
| >pdb|3GOQ|A Chain A, Crystal Structure Of The Tyr13met Variant Of Bacillus Subtilis Ferrochelatase Length = 310 | Back alignment and structure |
| >pdb|2AC4|A Chain A, Crystal Structure Of The His183cys Mutant Variant Of Bacillus Subtilis Ferrochelatase Length = 309 | Back alignment and structure |
| >pdb|2AC2|A Chain A, Crystal Structure Of The Tyr13phe Mutant Variant Of Bacillus Subtilis Ferrochelatase With Zn(2+) Bound At The Active Site Length = 309 | Back alignment and structure |
| >pdb|2Q3J|A Chain A, Crystal Structure Of The His183ala Variant Of Bacillus Subtilis Ferrochelatase In Complex With N-Methyl Mesoporphyrin Length = 309 | Back alignment and structure |
| >pdb|2H1W|A Chain A, Crystal Structure Of The His183ala Mutant Variant Of Bacillus Subtilis Ferrochelatase Length = 310 | Back alignment and structure |
| >pdb|1C1H|A Chain A, Crystal Structure Of Bacillus Subtilis Ferrochelatase In Complex With N-Methyl Mesoporphyrin Length = 310 | Back alignment and structure |
| >pdb|1DOZ|A Chain A, Crystal Structure Of Ferrochelatase Length = 309 | Back alignment and structure |
| >pdb|1C9E|A Chain A, Structure Of Ferrochelatase With Copper(Ii) N- Methylmesoporphyrin Complex Bound At The Active Site Length = 306 | Back alignment and structure |
| >pdb|2H1V|A Chain A, Crystal Structure Of The Lys87ala Mutant Variant Of Bacillus Subtilis Ferrochelatase Length = 310 | Back alignment and structure |
| >pdb|2C8J|A Chain A, Crystal Structure Of Ferrochelatase Hemh-1 From Bacillus Anthracis, Str. Ames Length = 311 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 308 | |||
| 1lbq_A | 362 | Ferrochelatase; rossmann fold, PI-helix, lyase; 2. | 6e-90 | |
| 3hcn_A | 359 | Ferrochelatase, mitochondrial; metal selectivity, | 4e-86 | |
| 2h1v_A | 310 | Ferrochelatase; rossman fold, PI-helix, lyase; 1.2 | 1e-72 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-05 |
| >1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A Length = 362 | Back alignment and structure |
|---|
Score = 271 bits (695), Expect = 6e-90
Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 6/197 (3%)
Query: 99 KVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEG 158
G++L+N+GGP + + FL+ LFAD D+I + + Q +AK I+ R PK ++
Sbjct: 7 PTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKY---QKTIAKYIAKFRTPKIEKQ 63
Query: 159 YAAIGGGSPLRKITDEQAQALKTALEAK---NLPVNVYVGMRYWYPFTEEAVQQIKRDRI 215
Y IGGGSP+RK ++ QA + L+ P YV RY P T E +Q+ +D +
Sbjct: 64 YREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGV 123
Query: 216 TRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQ 275
+ V YP FS STTGSSI L + + S+I W EG + + ++ I
Sbjct: 124 KKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSENIT 183
Query: 276 KELGKFQKPEEVSFIVV 292
K+L +F +P +++
Sbjct: 184 KKLQEFPQPVRDKVVLL 200
|
| >3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A* Length = 359 | Back alignment and structure |
|---|
| >2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A Length = 310 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 308 | |||
| 3hcn_A | 359 | Ferrochelatase, mitochondrial; metal selectivity, | 100.0 | |
| 1lbq_A | 362 | Ferrochelatase; rossmann fold, PI-helix, lyase; 2. | 100.0 | |
| 2h1v_A | 310 | Ferrochelatase; rossman fold, PI-helix, lyase; 1.2 | 100.0 | |
| 2xvy_A | 269 | Chelatase, putative; metal binding protein; HET: H | 99.64 | |
| 2xwp_A | 264 | Sirohydrochlorin cobaltochelatase; lyase, beta-alp | 99.33 | |
| 2jh3_A | 474 | Ribosomal protein S2-related protein; CBIX, SAD ph | 99.14 | |
| 3lyh_A | 126 | Cobalamin (vitamin B12) biosynthesis CBIX protein; | 99.02 | |
| 1tjn_A | 156 | Sirohydrochlorin cobaltochelatase; AF0721, APC5049 | 98.97 | |
| 2xws_A | 133 | Sirohydrochlorin cobaltochelatase; lyase, beta-alp | 98.93 | |
| 2xwp_A | 264 | Sirohydrochlorin cobaltochelatase; lyase, beta-alp | 98.31 | |
| 2xvy_A | 269 | Chelatase, putative; metal binding protein; HET: H | 98.05 | |
| 2h1v_A | 310 | Ferrochelatase; rossman fold, PI-helix, lyase; 1.2 | 97.82 | |
| 3hcn_A | 359 | Ferrochelatase, mitochondrial; metal selectivity, | 97.6 | |
| 1lbq_A | 362 | Ferrochelatase; rossmann fold, PI-helix, lyase; 2. | 97.39 | |
| 2jh3_A | 474 | Ribosomal protein S2-related protein; CBIX, SAD ph | 96.0 |
| >3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-58 Score=442.99 Aligned_cols=203 Identities=37% Similarity=0.621 Sum_probs=188.6
Q ss_pred CCceEEEEEccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccchhhHHhhcccCCCCchhHHHHHHH
Q 021762 97 EDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQA 176 (308)
Q Consensus 97 ~~K~aVLLlNlGgPes~~dV~~FL~n~f~D~~VI~lP~~~~~~~~~L~~~Ia~~R~~ks~~~Y~~IGggSPL~~iT~~Qa 176 (308)
++|+||||||||||++++||++||+|||+||+||++|. |++|+++|+++|++|++++|+.|||||||+.+|++|+
T Consensus 2 ~~k~gVLL~nlG~P~~~~~V~~fL~~~~~d~~Vi~~P~-----~~~L~~~I~~~R~~k~~~~Y~~igggSPL~~~t~~Q~ 76 (359)
T 3hcn_A 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPI-----QNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQG 76 (359)
T ss_dssp CCCEEEEEEECCCCSSGGGHHHHHHHHHTCTTTCCCTT-----HHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCHHHHHHHHHHHccCCcccccch-----HHHHhHHhcccchHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 57899999999999999999999999999999999982 6789999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC---CCceeEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHhccCCCCC
Q 021762 177 QALKTALEAKN---LPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLP 253 (308)
Q Consensus 177 ~aL~~~L~~~g---~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~~~~~~i~ 253 (308)
++|++.|++.+ .++.|++|||||+|+|+|++++|+++|+++||+||||||||.+||||+++.+.+++++....+.++
T Consensus 77 ~~L~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPlyPqyS~~Ttgs~~~~~~~~~~~~~~~~~~~ 156 (359)
T 3hcn_A 77 EGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMK 156 (359)
T ss_dssp HHHHHHHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHHHHHHHHHTTCCCSSE
T ss_pred HHHHHHHhhhcccccCceEEEEEeeCCCCHHHHHHHHHhcCCCeEEEEECCccccccchhhHHHHHHHHHHHhccCCCCc
Confidence 99999998754 468999999999999999999999999999999999999999999999999999988876555677
Q ss_pred eEEccCCCCChHHHHHHHHHHHHHHhhcCCC--CceEEEEEeCCCCchhhhhc
Q 021762 254 VSIIRSWYQREGYVNSMADLIQKELGKFQKP--EEVSFIVVAYTFCMVPLQKF 304 (308)
Q Consensus 254 v~~I~~~~~~p~YI~a~a~~I~e~l~~~~~~--~~~~LLFSaHglP~r~v~~~ 304 (308)
+++|++||+||+||+|++++|++++++++.+ ++++|||||||||+++++++
T Consensus 157 ~~~i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~~~LlfSaHgiP~~~~~~G 209 (359)
T 3hcn_A 157 WSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRG 209 (359)
T ss_dssp EEEECCCTTCHHHHHHHHHHHHHHHTTSCTTTGGGCEEEEEEECCBHHHHTTT
T ss_pred eEEeCCccCCHHHHHHHHHHHHHHHHhCCccccCCcEEEEEcCCChHhhcccC
Confidence 9999999999999999999999999887643 45789999999999999764
|
| >1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A | Back alignment and structure |
|---|
| >2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A | Back alignment and structure |
|---|
| >2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A* | Back alignment and structure |
|---|
| >2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A* | Back alignment and structure |
|---|
| >2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans} | Back alignment and structure |
|---|
| >3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
| >1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3 | Back alignment and structure |
|---|
| >2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A | Back alignment and structure |
|---|
| >2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A* | Back alignment and structure |
|---|
| >2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A* | Back alignment and structure |
|---|
| >2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A | Back alignment and structure |
|---|
| >3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A* | Back alignment and structure |
|---|
| >1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A | Back alignment and structure |
|---|
| >2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 308 | ||||
| d1lbqa_ | 356 | c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Sacch | 1e-48 | |
| d2hrca1 | 359 | c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sa | 1e-43 | |
| d2hk6a1 | 309 | c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtil | 5e-38 |
| >d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: Chelatase family: Ferrochelatase domain: Ferrochelatase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 163 bits (414), Expect = 1e-48
Identities = 66/190 (34%), Positives = 101/190 (53%), Gaps = 6/190 (3%)
Query: 99 KVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEG 158
G++L+N+GGP + + FL+ LFAD D+I + + Q +AK I+ R PK ++
Sbjct: 3 PTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKY---QKTIAKYIAKFRTPKIEKQ 59
Query: 159 YAAIGGGSPLRKITDEQAQALKTALE---AKNLPVNVYVGMRYWYPFTEEAVQQIKRDRI 215
Y IGGGSP+RK ++ QA + L+ + P YV RY P T E +Q+ +D +
Sbjct: 60 YREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGV 119
Query: 216 TRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQ 275
+ V YP FS STTGSSI L + + S+I W EG + + ++ I
Sbjct: 120 KKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSENIT 179
Query: 276 KELGKFQKPE 285
K+L +F +P
Sbjct: 180 KKLQEFPQPV 189
|
| >d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]} Length = 359 | Back information, alignment and structure |
|---|
| >d2hk6a1 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtilis [TaxId: 1423]} Length = 309 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 308 | |||
| d1lbqa_ | 356 | Ferrochelatase {Baker's yeast (Saccharomyces cerev | 100.0 | |
| d2hrca1 | 359 | Ferrochelatase {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d2hk6a1 | 309 | Ferrochelatase {Bacillus subtilis [TaxId: 1423]} | 100.0 | |
| d1qgoa_ | 257 | Cobalt chelatase CbiK {Salmonella typhimurium [Tax | 99.15 | |
| d1qgoa_ | 257 | Cobalt chelatase CbiK {Salmonella typhimurium [Tax | 97.92 | |
| d1tjna_ | 125 | Sirohydrochlorin cobaltochelatase CbiX {Archaeon A | 97.54 | |
| d2hrca1 | 359 | Ferrochelatase {Human (Homo sapiens) [TaxId: 9606] | 97.09 | |
| d2hk6a1 | 309 | Ferrochelatase {Bacillus subtilis [TaxId: 1423]} | 96.86 | |
| d1lbqa_ | 356 | Ferrochelatase {Baker's yeast (Saccharomyces cerev | 95.17 |
| >d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: Chelatase family: Ferrochelatase domain: Ferrochelatase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8.7e-58 Score=439.14 Aligned_cols=205 Identities=34% Similarity=0.583 Sum_probs=189.3
Q ss_pred CCceEEEEEccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccchhhHHhhcccCCCCchhHHHHHHH
Q 021762 97 EDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQA 176 (308)
Q Consensus 97 ~~K~aVLLlNlGgPes~~dV~~FL~n~f~D~~VI~lP~~~~~~~~~L~~~Ia~~R~~ks~~~Y~~IGggSPL~~iT~~Qa 176 (308)
+.|+||||||||||++++||++||+|||+||+||++|+++ |++|+++|+++|++|++++|++|||||||+.+|++|+
T Consensus 1 k~~tgVLL~nlGtP~s~~~V~~yL~~fl~D~~vi~~p~~~---~~~l~~~I~~~R~~k~a~~Y~~IgggSPL~~~t~~qa 77 (356)
T d1lbqa_ 1 RSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKY---QKTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQA 77 (356)
T ss_dssp CCCEEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSSS---HHHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHH
T ss_pred CCceEEEEEECCCCCChHHHHHHHHHHcCCCccccCCHHH---HHHHhhhcCccCCHHHHHHHHHcCCCChhHHHHHHHH
Confidence 4689999999999999999999999999999999999764 4578899999999999999999999999999999999
Q ss_pred HHHHHHHHhcC---CCceeEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHhccCCCCC
Q 021762 177 QALKTALEAKN---LPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLP 253 (308)
Q Consensus 177 ~aL~~~L~~~g---~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~~~~~~i~ 253 (308)
++|++.|++.. .++.|++|||||+|+|+++|++|+++|+++|++||||||||.+|||++++.+.+++++....+.+.
T Consensus 78 ~~l~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ilvlPlyPqyS~sTt~s~~~~v~~~l~~~~~~~~~~ 157 (356)
T d1lbqa_ 78 TEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSIS 157 (356)
T ss_dssp HHHHHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHHCTTCCSE
T ss_pred HHHHHHhhccccccCCceeEEEeccccccHHHHHHHHHhCCCcceEEEecchhhhHHHHHHHHHHHHHHHHHhhhhcccc
Confidence 99999998653 478999999999999999999999999999999999999999999999999999988766555677
Q ss_pred eEEccCCCCChHHHHHHHHHHHHHHhhcCCC--CceEEEEEeCCCCchhhhhc
Q 021762 254 VSIIRSWYQREGYVNSMADLIQKELGKFQKP--EEVSFIVVAYTFCMVPLQKF 304 (308)
Q Consensus 254 v~~I~~~~~~p~YI~a~a~~I~e~l~~~~~~--~~~~LLFSaHglP~r~v~~~ 304 (308)
+++|++||+||+||+|++++|++++++++.+ ++.+|||||||||.+.++++
T Consensus 158 ~~~I~~~~~~p~yI~a~a~~i~~~l~~~~~~~~~~~~LlfS~HgiP~~~~~~g 210 (356)
T d1lbqa_ 158 WSVIDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTG 210 (356)
T ss_dssp EEEECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHHTTT
T ss_pred ceeecccccchhHHHHHHHHHHHHHHHcCcccccCcEEEEecCCcccchhhcC
Confidence 9999999999999999999999999987643 45789999999999998764
|
| >d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2hk6a1 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1qgoa_ c.92.1.2 (A:) Cobalt chelatase CbiK {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1qgoa_ c.92.1.2 (A:) Cobalt chelatase CbiK {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1tjna_ c.92.1.3 (A:) Sirohydrochlorin cobaltochelatase CbiX {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2hk6a1 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|