Citrus Sinensis ID: 021787

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------
MPEIQLGAHTVRSHGLKVLKLHMHDWLILLLLGVIEIILNVIEPFHRFVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTDGMSLTLYFMVVCCSVLFSLPSASINTQLCIQWYCLDWKVRQGVGSVSFTQQIFVF
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEcccHHHHHccccccccccHHHHHHHHHHHHHHHHccEEEccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHEEEEcccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccc
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHEccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHEEEcccccEcccccEEEEEEEccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHcccccccccccEEEEEccEEEEEEEcccEEEEEEEEEEEc
mpeiqlgahtvRSHGLKVLKLHMHDWLILLLLGVIEIILNVIEpfhrfvgedmmtdlrypmkdntvpfwavPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIkdavgrprpdffwrcfpdgkgvfdnvtRNVVCtgqnhvikeghksfpsghtswsfaGLGFLSLYLSgkirvfdrrgHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCylqffpppydtdgmslTLYFMVVCCSVlfslpsasintQLCIQWYCLDwkvrqgvgsvsfTQQIFVF
mpeiqlgahtvRSHGLKVLKLHMHDWLILLLLGVIEIILNVIEPFHRFVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTDGMSLTLYFMVVCCSVLFSLPSASINTQLCIQWYCLDWKVRQGVGSVSftqqifvf
MPEIQLGAHTVRSHGLKVlklhmhdwlillllgvieiilnviePFHRFVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTDGMSLTLYFMVVCCSVLFSLPSASINTQLCIQWYCLDWKVRQGVGSVSFTQQIFVF
*******AHTVRSHGLKVLKLHMHDWLILLLLGVIEIILNVIEPFHRFVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTDGMSLTLYFMVVCCSVLFSLPSASINTQLCIQWYCLDWKVRQGVGSVSFTQQIFV*
****************KVLKLHMHDWLILLLLGVIEIILNVIEPFHRFVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTDGMSLT**********************************************IFVF
MPEIQLGAHTVRSHGLKVLKLHMHDWLILLLLGVIEIILNVIEPFHRFVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTDGMSLTLYFMVVCCSVLFSLPSASINTQLCIQWYCLDWKVRQGVGSVSFTQQIFVF
*************HGLKVLKLHMHDWLILLLLGVIEIILNVIEPFHRFVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTDGMSLTLYFMVVCCSVL******SINTQLCIQWYCLDWKVRQGVGSVSFTQQIFVF
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooo
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MPEIQLGAHTVRSHGLKVLKLHMHDWLILLLLGVIEIILNVIEPFHRFVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTDGMSLTLYFMVVCCSVLFSLPSASINTQLCIQWYCLDWKVRQGVGSVSFTQQIFVF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query307 2.2.26 [Sep-21-2011]
Q9XI60290 Lipid phosphate phosphata yes no 0.902 0.955 0.794 1e-121
Q8LFD1364 Putative lipid phosphate no no 0.899 0.758 0.646 1e-107
Q9ZU49327 Lipid phosphate phosphata no no 0.853 0.801 0.642 2e-99
Q0VBU9271 Phosphatidate phosphatase yes no 0.703 0.797 0.407 4e-41
Q5VZY2271 Phosphatidate phosphatase yes no 0.703 0.797 0.398 1e-40
Q3UMZ3260 Phosphatidate phosphatase no no 0.716 0.846 0.406 3e-40
Q8NEB5264 Phosphatidate phosphatase no no 0.716 0.833 0.397 6e-40
Q6GQ62226 Phosphatidate phosphatase N/A no 0.602 0.818 0.440 2e-38
Q54PR7271 PA-phosphatase related-fa yes no 0.706 0.800 0.381 6e-37
Q9UUA6279 Probable diacylglycerol p yes no 0.716 0.788 0.340 6e-33
>sp|Q9XI60|LPP2_ARATH Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana GN=LPP2 PE=2 SV=1 Back     alignment and function desciption
 Score =  436 bits (1121), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 220/277 (79%), Positives = 243/277 (87%)

Query: 1   MPEIQLGAHTVRSHGLKVLKLHMHDWLILLLLGVIEIILNVIEPFHRFVGEDMMTDLRYP 60
           MPEI LGAHT+RSHG+ V + HMHDWLILLLL VIEI+LNVIEPFHRFVGEDM+TDLRYP
Sbjct: 1   MPEIHLGAHTIRSHGVTVARFHMHDWLILLLLIVIEIVLNVIEPFHRFVGEDMLTDLRYP 60

Query: 61  MKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDA 120
           ++DNT+PFWAVPLIA++LPF V+ VYYFIR DVYDLHHAILGLL+SVLITGVITDAIKDA
Sbjct: 61  LQDNTIPFWAVPLIAVVLPFAVICVYYFIRNDVYDLHHAILGLLFSVLITGVITDAIKDA 120

Query: 121 VGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSL 180
           VGRPRPDFFWRCFPDG G+F NVT+NV+CTG   V+KEGHKSFPSGHTSWSFAGLGFLSL
Sbjct: 121 VGRPRPDFFWRCFPDGIGIFHNVTKNVLCTGAKDVVKEGHKSFPSGHTSWSFAGLGFLSL 180

Query: 181 YLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFC 240
           YLSGKIRVFD+RGHVAKLCIV LP L+AAL+GVSRVDDYWHHWQDVFGGAIIG  V+ FC
Sbjct: 181 YLSGKIRVFDQRGHVAKLCIVILPLLVAALVGVSRVDDYWHHWQDVFGGAIIGLTVATFC 240

Query: 241 YLQFFPPPYDTDGMSLTLYFMVVCCSVLFSLPSASIN 277
           YLQFFPPPYD DG     YF ++  S      SA +N
Sbjct: 241 YLQFFPPPYDPDGWGPHAYFQMLADSRNDVQDSAGMN 277
May play a general "housekeeping role" in lipid metabolism. Exhibits both diacylglycerol pyrophosphate (DGPP) phosphatase and phosphatidate (PA) phosphatase activities with no preference for either substrate.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: -
>sp|Q8LFD1|LPP3_ARATH Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZU49|LPP1_ARATH Lipid phosphate phosphatase 1 OS=Arabidopsis thaliana GN=LPP1 PE=2 SV=2 Back     alignment and function description
>sp|Q0VBU9|PPC1A_MOUSE Phosphatidate phosphatase PPAPDC1A OS=Mus musculus GN=Ppapdc1a PE=2 SV=1 Back     alignment and function description
>sp|Q5VZY2|PPC1A_HUMAN Phosphatidate phosphatase PPAPDC1A OS=Homo sapiens GN=PPAPDC1A PE=1 SV=2 Back     alignment and function description
>sp|Q3UMZ3|PPC1B_MOUSE Phosphatidate phosphatase PPAPDC1B OS=Mus musculus GN=Ppapdc1b PE=2 SV=1 Back     alignment and function description
>sp|Q8NEB5|PPC1B_HUMAN Phosphatidate phosphatase PPAPDC1B OS=Homo sapiens GN=PPAPDC1B PE=1 SV=2 Back     alignment and function description
>sp|Q6GQ62|PPC1B_XENLA Phosphatidate phosphatase PPAPDC1B OS=Xenopus laevis GN=ppapdc1b PE=2 SV=1 Back     alignment and function description
>sp|Q54PR7|Y4367_DICDI PA-phosphatase related-family protein DDB_G0284367 OS=Dictyostelium discoideum GN=DDB_G0284367 PE=3 SV=1 Back     alignment and function description
>sp|Q9UUA6|DPP1_SCHPO Probable diacylglycerol pyrophosphate phosphatase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dpp1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query307
225424095321 PREDICTED: lipid phosphate phosphatase 2 0.866 0.828 0.789 1e-122
297844410312 ATPAP2 [Arabidopsis lyrata subsp. lyrata 0.902 0.887 0.790 1e-121
15218051290 Lipid phosphate phosphatase 2 [Arabidops 0.902 0.955 0.794 1e-120
374671175311 phosphatidate phosphatase [Jatropha curc 0.905 0.893 0.773 1e-118
358248122322 uncharacterized protein LOC100805924 [Gl 0.908 0.866 0.742 1e-118
255570669316 ER Phosphatidate Phosphatase [Ricinus co 0.902 0.876 0.758 1e-116
224111600314 predicted protein [Populus trichocarpa] 0.902 0.882 0.761 1e-115
363807094322 uncharacterized protein LOC100785459 [Gl 0.908 0.866 0.732 1e-115
356530711302 PREDICTED: lipid phosphate phosphatase 2 0.859 0.874 0.776 1e-114
10673973322 phosphatidic acid phosphatase beta [Vign 0.908 0.866 0.725 1e-112
>gi|225424095|ref|XP_002282854.1| PREDICTED: lipid phosphate phosphatase 2 [Vitis vinifera] gi|297737763|emb|CBI26964.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 210/266 (78%), Positives = 234/266 (87%)

Query: 1   MPEIQLGAHTVRSHGLKVLKLHMHDWLILLLLGVIEIILNVIEPFHRFVGEDMMTDLRYP 60
           MPEIQLGAHT+RSHGLKV + HMHDWLIL+LL VIE+ILNVIEPFHRFVG++M+TDL YP
Sbjct: 1   MPEIQLGAHTIRSHGLKVARSHMHDWLILILLVVIEVILNVIEPFHRFVGKEMLTDLSYP 60

Query: 61  MKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDA 120
           ++ NT+PFW+VPLIAILLP +V+ VYYFIR+DVYDLHHAILGLL+SVLIT VITDAIKDA
Sbjct: 61  LQTNTIPFWSVPLIAILLPIVVILVYYFIRQDVYDLHHAILGLLFSVLITAVITDAIKDA 120

Query: 121 VGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSL 180
           VGRPRPDFFWRCFP+GKGVFD  T +V+CTG   VIKEGHKSFPSGHTSWSFAGL FLS 
Sbjct: 121 VGRPRPDFFWRCFPNGKGVFDTRTTDVLCTGDKSVIKEGHKSFPSGHTSWSFAGLSFLSW 180

Query: 181 YLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFC 240
           YLSGKIR FDR+GHVAKLCIVFLP LLAAL+GVSRVDDYWHHWQDVF G +IG  V+ FC
Sbjct: 181 YLSGKIRAFDRKGHVAKLCIVFLPILLAALVGVSRVDDYWHHWQDVFAGGVIGATVASFC 240

Query: 241 YLQFFPPPYDTDGMSLTLYFMVVCCS 266
           YLQFFPPPYD DG     YF ++  S
Sbjct: 241 YLQFFPPPYDIDGWGPHAYFEMLAES 266

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297844410|ref|XP_002890086.1| ATPAP2 [Arabidopsis lyrata subsp. lyrata] gi|297335928|gb|EFH66345.1| ATPAP2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15218051|ref|NP_172961.1| Lipid phosphate phosphatase 2 [Arabidopsis thaliana] gi|41017421|sp|Q9XI60.1|LPP2_ARATH RecName: Full=Lipid phosphate phosphatase 2; Short=AtLPP2; AltName: Full=Phosphatidic acid phosphatase 2; Short=AtPAP2; AltName: Full=Prenyl diphosphate phosphatase gi|5103807|gb|AAD39637.1|AC007591_2 Contains similarity to gb|AF014403 type-2 phosphatidic acid phosphatase alpha-2 (PAP2_a2) from Homo sapiens. ESTs gb|T88254 and gb|AA394650 come from this gene [Arabidopsis thaliana] gi|14020949|dbj|BAB47574.1| phosphatidic acid phosphatase [Arabidopsis thaliana] gi|21593261|gb|AAM65210.1| putative phosphatidic acid phosphatase [Arabidopsis thaliana] gi|26005745|dbj|BAC41335.1| prenyl diphosphate phosphatase [Arabidopsis thaliana] gi|28393050|gb|AAO41959.1| putative phosphatidic acid phosphatase [Arabidopsis thaliana] gi|28827316|gb|AAO50502.1| putative phosphatidic acid phosphatase [Arabidopsis thaliana] gi|332191142|gb|AEE29263.1| Lipid phosphate phosphatase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|374671175|gb|AEZ56253.1| phosphatidate phosphatase [Jatropha curcas] Back     alignment and taxonomy information
>gi|358248122|ref|NP_001239819.1| uncharacterized protein LOC100805924 [Glycine max] gi|255648407|gb|ACU24654.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|255570669|ref|XP_002526289.1| ER Phosphatidate Phosphatase [Ricinus communis] gi|223534370|gb|EEF36078.1| ER Phosphatidate Phosphatase [Ricinus communis] Back     alignment and taxonomy information
>gi|224111600|ref|XP_002315916.1| predicted protein [Populus trichocarpa] gi|222864956|gb|EEF02087.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|363807094|ref|NP_001242078.1| uncharacterized protein LOC100785459 [Glycine max] gi|255642092|gb|ACU21312.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356530711|ref|XP_003533924.1| PREDICTED: lipid phosphate phosphatase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|10673973|gb|AAF89745.3|AF171230_1 phosphatidic acid phosphatase beta [Vigna unguiculata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query307
TAIR|locus:2037758290 LPP2 "lipid phosphate phosphat 0.902 0.955 0.722 1.3e-109
TAIR|locus:2076919364 LPP3 "lipid phosphate phosphat 0.853 0.719 0.634 1.3e-93
TAIR|locus:2089643308 LPP4 "lipid phosphate phosphat 0.856 0.853 0.596 2e-86
TAIR|locus:2038826327 PAP1 "phosphatidic acid phosph 0.843 0.792 0.6 1.1e-85
UNIPROTKB|F1NLF4249 PPAPDC1B "Uncharacterized prot 0.661 0.815 0.429 1.1e-41
ZFIN|ZDB-GENE-040704-54358 ppapdc1b "phosphatidic acid ph 0.664 0.569 0.413 3.6e-41
RGD|1591734260 Ppapdc1b "phosphatidic acid ph 0.664 0.784 0.431 7.5e-41
ASPGD|ASPL0000044538314 AN2124 [Emericella nidulans (t 0.654 0.640 0.416 3.3e-40
UNIPROTKB|F1Q0R6262 PPAPDC1B "Uncharacterized prot 0.661 0.774 0.429 6.8e-40
UNIPROTKB|Q8NEB5264 PPAPDC1B "Phosphatidate phosph 0.664 0.772 0.417 8.7e-40
TAIR|locus:2037758 LPP2 "lipid phosphate phosphatase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1083 (386.3 bits), Expect = 1.3e-109, P = 1.3e-109
 Identities = 200/277 (72%), Positives = 221/277 (79%)

Query:     1 MPEIQLGAHTVRSHGLKVXXXXXXXXXXXXXXXXXXXXXXXXXPFHRFVGEDMMTDLRYP 60
             MPEI LGAHT+RSHG+ V                         PFHRFVGEDM+TDLRYP
Sbjct:     1 MPEIHLGAHTIRSHGVTVARFHMHDWLILLLLIVIEIVLNVIEPFHRFVGEDMLTDLRYP 60

Query:    61 MKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDA 120
             ++DNT+PFWAVPLIA++LPF V+ VYYFIR DVYDLHHAILGLL+SVLITGVITDAIKDA
Sbjct:    61 LQDNTIPFWAVPLIAVVLPFAVICVYYFIRNDVYDLHHAILGLLFSVLITGVITDAIKDA 120

Query:   121 VGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSL 180
             VGRPRPDFFWRCFPDG G+F NVT+NV+CTG   V+KEGHKSFPSGHTSWSFAGLGFLSL
Sbjct:   121 VGRPRPDFFWRCFPDGIGIFHNVTKNVLCTGAKDVVKEGHKSFPSGHTSWSFAGLGFLSL 180

Query:   181 YLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFC 240
             YLSGKIRVFD+RGHVAKLCIV LP L+AAL+GVSRVDDYWHHWQDVFGGAIIG  V+ FC
Sbjct:   181 YLSGKIRVFDQRGHVAKLCIVILPLLVAALVGVSRVDDYWHHWQDVFGGAIIGLTVATFC 240

Query:   241 YLQFFPPPYDTDGMSLTLYFMVVCCSVLFSLPSASIN 277
             YLQFFPPPYD DG     YF ++  S      SA +N
Sbjct:   241 YLQFFPPPYDPDGWGPHAYFQMLADSRNDVQDSAGMN 277
GO:0003824 "catalytic activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0008195 "phosphatidate phosphatase activity" evidence=ISS;IDA
GO:0016020 "membrane" evidence=IEA
GO:0005887 "integral to plasma membrane" evidence=ISS
GO:0009738 "abscisic acid mediated signaling pathway" evidence=IGI
GO:0003993 "acid phosphatase activity" evidence=ISS
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2076919 LPP3 "lipid phosphate phosphatase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089643 LPP4 "lipid phosphate phosphatase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038826 PAP1 "phosphatidic acid phosphatase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1NLF4 PPAPDC1B "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040704-54 ppapdc1b "phosphatidic acid phosphatase type 2 domain containing 1B" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1591734 Ppapdc1b "phosphatidic acid phosphatase type 2 domain containing 1B" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ASPGD|ASPL0000044538 AN2124 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q0R6 PPAPDC1B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q8NEB5 PPAPDC1B "Phosphatidate phosphatase PPAPDC1B" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9XI60LPP2_ARATH3, ., 1, ., 3, ., -0.79420.90220.9551yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.30.766
4th Layer1.11.1.10LOW CONFIDENCE prediction!
3rd Layer1.11.1LOW CONFIDENCE prediction!
4th Layer1.11.1.18LOW CONFIDENCE prediction!
3rd Layer3.1.3.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query307
PLN02250314 PLN02250, PLN02250, lipid phosphate phosphatase 1e-180
PLN02731333 PLN02731, PLN02731, Putative lipid phosphate phosp 1e-137
PLN02715327 PLN02715, PLN02715, lipid phosphate phosphatase 1e-128
cd03390193 cd03390, PAP2_containing_1_like, PAP2, subfamily s 2e-81
cd03384150 cd03384, PAP2_wunen, PAP2, wunen subfamily 3e-32
cd01610122 cd01610, PAP2_like, PAP2_like proteins, a super-fa 5e-24
smart00014116 smart00014, acidPPc, Acid phosphatase homologues 3e-17
pfam01569123 pfam01569, PAP2, PAP2 superfamily 5e-17
cd03394106 cd03394, PAP2_like_5, PAP2_like_5 proteins 6e-14
cd03392182 cd03392, PAP2_like_2, PAP2_like_2 proteins 2e-12
COG0671232 COG0671, PgpB, Membrane-associated phospholipid ph 3e-09
cd03389186 cd03389, PAP2_lipid_A_1_phosphatase, PAP2_like pro 2e-08
cd03395177 cd03395, PAP2_like_4, PAP2_like_4 proteins 1e-07
cd03382159 cd03382, PAP2_dolichyldiphosphatase, PAP2_like pro 5e-05
cd03380209 cd03380, PAP2_like_1, PAP2_like_1 proteins, a sub- 9e-04
cd03396197 cd03396, PAP2_like_6, PAP2_like_6 proteins 0.002
cd03383109 cd03383, PAP2_diacylglycerolkinase, PAP2_like prot 0.004
>gnl|CDD|215139 PLN02250, PLN02250, lipid phosphate phosphatase Back     alignment and domain information 
 Score =  499 bits (1287), Expect = e-180
 Identities = 223/277 (80%), Positives = 244/277 (88%)

Query: 1   MPEIQLGAHTVRSHGLKVLKLHMHDWLILLLLGVIEIILNVIEPFHRFVGEDMMTDLRYP 60
           MPEIQLGAHT+RSHG+KV + HMHDWLILLLL VIE++LNVIEPFHRFVG+DM+TDL YP
Sbjct: 1   MPEIQLGAHTIRSHGVKVARTHMHDWLILLLLVVIEVVLNVIEPFHRFVGKDMLTDLSYP 60

Query: 61  MKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDA 120
           ++DNT+PFWAVPLIAILLPF V+ VYYFIRRDVYDLHHAILGLL+SVLITGVITDAIKDA
Sbjct: 61  LQDNTIPFWAVPLIAILLPFAVILVYYFIRRDVYDLHHAILGLLFSVLITGVITDAIKDA 120

Query: 121 VGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSL 180
           VGRPRPDFFWRCFPDGKGVF  VT +V+CTG   VIKEGHKSFPSGHTSWSFAGLGFLSL
Sbjct: 121 VGRPRPDFFWRCFPDGKGVFHPVTTDVLCTGAKSVIKEGHKSFPSGHTSWSFAGLGFLSL 180

Query: 181 YLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFC 240
           YLSGKIRVFDRRGHVAKLCIVFLP L+AAL+GVSRVDDYWHHWQDVF GA+IG  V+ FC
Sbjct: 181 YLSGKIRVFDRRGHVAKLCIVFLPLLVAALVGVSRVDDYWHHWQDVFAGALIGLTVASFC 240

Query: 241 YLQFFPPPYDTDGMSLTLYFMVVCCSVLFSLPSASIN 277
           YLQFFPPPYD DG     YF ++  S   +  S  IN
Sbjct: 241 YLQFFPPPYDIDGWGPHAYFQMLAESRNGAQSSNGIN 277

Length = 314
>gnl|CDD|178332 PLN02731, PLN02731, Putative lipid phosphate phosphatase Back     alignment and domain information
>gnl|CDD|178317 PLN02715, PLN02715, lipid phosphate phosphatase Back     alignment and domain information
>gnl|CDD|239484 cd03390, PAP2_containing_1_like, PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1 Back     alignment and domain information
>gnl|CDD|239479 cd03384, PAP2_wunen, PAP2, wunen subfamily Back     alignment and domain information
>gnl|CDD|238813 cd01610, PAP2_like, PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies Back     alignment and domain information
>gnl|CDD|214471 smart00014, acidPPc, Acid phosphatase homologues Back     alignment and domain information
>gnl|CDD|216577 pfam01569, PAP2, PAP2 superfamily Back     alignment and domain information
>gnl|CDD|239488 cd03394, PAP2_like_5, PAP2_like_5 proteins Back     alignment and domain information
>gnl|CDD|239486 cd03392, PAP2_like_2, PAP2_like_2 proteins Back     alignment and domain information
>gnl|CDD|223743 COG0671, PgpB, Membrane-associated phospholipid phosphatase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|239483 cd03389, PAP2_lipid_A_1_phosphatase, PAP2_like proteins, Lipid A 1-phosphatase subfamily Back     alignment and domain information
>gnl|CDD|239489 cd03395, PAP2_like_4, PAP2_like_4 proteins Back     alignment and domain information
>gnl|CDD|239477 cd03382, PAP2_dolichyldiphosphatase, PAP2_like proteins, dolichyldiphosphatase subfamily Back     alignment and domain information
>gnl|CDD|239475 cd03380, PAP2_like_1, PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases Back     alignment and domain information
>gnl|CDD|239490 cd03396, PAP2_like_6, PAP2_like_6 proteins Back     alignment and domain information
>gnl|CDD|239478 cd03383, PAP2_diacylglycerolkinase, PAP2_like proteins, diacylglycerol_kinase like sub-family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 307
PLN02250314 lipid phosphate phosphatase 100.0
PLN02715327 lipid phosphate phosphatase 100.0
PLN02731333 Putative lipid phosphate phosphatase 100.0
KOG3030317 consensus Lipid phosphate phosphatase and related 100.0
cd03390193 PAP2_containing_1_like PAP2, subfamily similar to 100.0
cd03384150 PAP2_wunen PAP2, wunen subfamily. Most likely a fa 99.96
cd03396197 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super- 99.9
cd03382159 PAP2_dolichyldiphosphatase PAP2_like proteins, dol 99.88
cd03389186 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lip 99.88
cd03392182 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super- 99.87
PRK10699244 phosphatidylglycerophosphatase B; Provisional 99.87
cd03383109 PAP2_diacylglycerolkinase PAP2_like proteins, diac 99.87
cd03391159 PAP2_containing_2_like PAP2, subfamily similar to 99.87
cd03385144 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfa 99.86
cd03395177 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super- 99.86
cd03388151 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-pho 99.85
cd03394106 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super- 99.85
cd03393125 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super- 99.84
PRK09597190 lipid A 1-phosphatase; Reviewed 99.84
PRK11837202 undecaprenyl pyrophosphate phosphatase; Provisiona 99.83
smart00014116 acidPPc Acid phosphatase homologues. 99.82
cd03381235 PAP2_glucose_6_phosphatase PAP2_like proteins, glu 99.8
PLN02525 352 phosphatidic acid phosphatase family protein 99.78
PF01569129 PAP2: PAP2 superfamily This family includes the fo 99.76
cd01610122 PAP2_like PAP2_like proteins, a super-family of hi 99.72
COG0671232 PgpB Membrane-associated phospholipid phosphatase 99.67
cd03397232 PAP2_acid_phosphatase PAP2, bacterial acid phospha 99.66
cd03380209 PAP2_like_1 PAP2_like_1 proteins, a sub-family of 99.64
KOG4268189 consensus Uncharacterized conserved protein contai 99.63
KOG3146228 consensus Dolichyl pyrophosphate phosphatase and r 99.47
cd03398232 PAP2_haloperoxidase PAP2, haloperoxidase_like subf 99.45
cd03386186 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfa 99.4
COG3907249 PAP2 (acid phosphatase) superfamily protein [Gener 99.29
KOG2822 407 consensus Sphingoid base-phosphate phosphatase [Li 99.08
PF14378191 PAP2_3: PAP2 superfamily 98.51
COG1963153 Uncharacterized protein conserved in bacteria [Fun 96.68
PF1436074 PAP2_C: PAP2 superfamily C-terminal 96.47
PF02681141 DUF212: Divergent PAP2 family; InterPro: IPR003832 95.9
>PLN02250 lipid phosphate phosphatase Back     alignment and domain information 
Probab=100.00  E-value=8.9e-58  Score=418.68  Aligned_cols=275  Identities=80%  Similarity=1.398  Sum_probs=257.0

Q ss_pred             CCccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCccCCCCCCCCCCCcchhHHHHHHHHHHH
Q 021787            1 MPEIQLGAHTVRSHGLKVLKLHMHDWLILLLLGVIEIILNVIEPFHRFVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPF   80 (307)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~p~~~~~i~~~~l~~~~~~~p~   80 (307)
                      |+|+|+|+||.++|+.++.|+++.||+++++++++..++..++|++|++.+++.++++||++++++|.+++.++++++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~Dwii~i~l~~i~~i~~~i~Pf~r~~~~~~~~~i~yP~~~~tVp~~~l~ii~~~iP~   80 (314)
T PLN02250          1 MPEIQLGAHTIRSHGVKVARTHMHDWLILLLLVVIEVVLNVIEPFHRFVGKDMLTDLSYPLQDNTIPFWAVPLIAILLPF   80 (314)
T ss_pred             CCcccccccchhccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCcchhhccCCCCCCeecHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999988999999999888776778999999999999999999999999


Q ss_pred             HHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCccccccCCCCCCcccccccceeecCCcccccCCC
Q 021787           81 IVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGH  160 (307)
Q Consensus        81 ~i~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~lK~~~grpRP~~l~~c~p~~~~~~~~~~~~~~c~~~~~~~~~~~  160 (307)
                      ++++++++.+++.+++++.++.++++++++.++++++|..+|||||+++++|+|++...++....+..|+++...+++++
T Consensus        81 ~vilv~~~~r~~~~~l~~~~l~ll~sv~~t~lit~~lK~~vGRpRPdfl~rC~P~~~~~~~~~~~~~~Ctg~~~~l~dg~  160 (314)
T PLN02250         81 AVILVYYFIRRDVYDLHHAILGLLFSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFHPVTTDVLCTGAKSVIKEGH  160 (314)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCChhhhcCccccccccccccceeecCCcccccccC
Confidence            99999999899899999999999999999999999999999999999999999998877777777889998877888999


Q ss_pred             CCCCCchHHHHHHHHHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCChhHhHHHHHHHHHHHHHH
Q 021787          161 KSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFC  240 (307)
Q Consensus       161 ~SFPSGHas~a~~~~~~l~l~l~~~~~~~~~~~~~~~~~l~~~~l~~a~lv~~SRv~~g~H~~sDVl~G~~lG~~~a~~~  240 (307)
                      +|||||||+.++++++++++|+..+++.++++++.+|.++.++++++++++|+||++||+||++||++|+++|++++.++
T Consensus       161 ~SFPSGHSS~afa~~~fLslyL~~kl~~~~~~~~~~r~~l~~lpll~A~lVa~SRI~dy~Hh~sDVlaG~lIG~~~A~~~  240 (314)
T PLN02250        161 KSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPLLVAALVGVSRVDDYWHHWQDVFAGALIGLTVASFC  240 (314)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998877777788899888999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCCCCcchhhhHhhhccccccCCCCc
Q 021787          241 YLQFFPPPYDTDGMSLTLYFMVVCCSVLFSLPSAS  275 (307)
Q Consensus       241 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  275 (307)
                      |+.+||++.++++|.|+++++.++++..+.++...
T Consensus       241 y~~~fp~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  275 (314)
T PLN02250        241 YLQFFPPPYDIDGWGPHAYFQMLAESRNGAQSSNG  275 (314)
T ss_pred             HHHHcCCcccCCCCCcchhHHHhhccccccccccc
Confidence            99999999999999999999999888876665544

>PLN02715 lipid phosphate phosphatase Back     alignment and domain information
>PLN02731 Putative lipid phosphate phosphatase Back     alignment and domain information
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism] Back     alignment and domain information
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1 Back     alignment and domain information
>cd03384 PAP2_wunen PAP2, wunen subfamily Back     alignment and domain information
>cd03396 PAP2_like_6 PAP2_like_6 proteins Back     alignment and domain information
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily Back     alignment and domain information
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily Back     alignment and domain information
>cd03392 PAP2_like_2 PAP2_like_2 proteins Back     alignment and domain information
>PRK10699 phosphatidylglycerophosphatase B; Provisional Back     alignment and domain information
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family Back     alignment and domain information
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2 Back     alignment and domain information
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily Back     alignment and domain information
>cd03395 PAP2_like_4 PAP2_like_4 proteins Back     alignment and domain information
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily Back     alignment and domain information
>cd03394 PAP2_like_5 PAP2_like_5 proteins Back     alignment and domain information
>cd03393 PAP2_like_3 PAP2_like_3 proteins Back     alignment and domain information
>PRK09597 lipid A 1-phosphatase; Reviewed Back     alignment and domain information
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional Back     alignment and domain information
>smart00014 acidPPc Acid phosphatase homologues Back     alignment and domain information
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily Back     alignment and domain information
>PLN02525 phosphatidic acid phosphatase family protein Back     alignment and domain information
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3 Back     alignment and domain information
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies Back     alignment and domain information
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism] Back     alignment and domain information
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases Back     alignment and domain information
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases Back     alignment and domain information
>KOG4268 consensus Uncharacterized conserved protein containing PAP2 domain [Function unknown] Back     alignment and domain information
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism] Back     alignment and domain information
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily Back     alignment and domain information
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily Back     alignment and domain information
>COG3907 PAP2 (acid phosphatase) superfamily protein [General function prediction only] Back     alignment and domain information
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism] Back     alignment and domain information
>PF14378 PAP2_3: PAP2 superfamily Back     alignment and domain information
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF14360 PAP2_C: PAP2 superfamily C-terminal Back     alignment and domain information
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query307
1d2t_A231 Acid phosphatase; all alpha, hydrolase; 1.90A {Esc 5e-11
2ipb_A230 PHON protein, class A nonspecific acid phosphatase 6e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A Length = 231 Back     alignment and structure
 Score = 60.4 bits (146), Expect = 5e-11
 Identities = 27/128 (21%), Positives = 42/128 (32%), Gaps = 29/128 (22%)

Query: 109 ITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHT 168
              + T + KD   R RP                      C          + S+PSGHT
Sbjct: 106 AGDLATRSAKDHYMRIRPF--------------AFYGVSTCNTTEQDKLSKNGSYPSGHT 151

Query: 169 SWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFG 228
           S  +A     +L L+    +  +R +                +G SRV   +H   DV  
Sbjct: 152 SIGWA----TALVLA---EINPQRQNEI--------LKRGYELGQSRVICGYHWQSDVDA 196

Query: 229 GAIIGTIV 236
             ++G+ V
Sbjct: 197 ARVVGSAV 204
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A Length = 230 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query307
2ipb_A230 PHON protein, class A nonspecific acid phosphatase 99.77
1d2t_A231 Acid phosphatase; all alpha, hydrolase; 1.90A {Esc 99.76
1qi9_A556 Protein (vanadium bromoperoxidase); haloperoxidase 99.43
1up8_A598 Vanadium-dependent bromoperoxidase 1; haloperoxida 99.2
3bb0_A609 Vanadium chloroperoxidase; protein phosphate-inter 99.07
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A Back     alignment and structure
Probab=99.77  E-value=4.2e-19  Score=156.95  Aligned_cols=100  Identities=24%  Similarity=0.176  Sum_probs=73.9

Q ss_pred             HHHHHHHhhhCCCCCccccccCCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHHHHhhccccccC
Q 021787          112 VITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDR  191 (307)
Q Consensus       112 ~~~~~lK~~~grpRP~~l~~c~p~~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~l~l~~~~~~~~~  191 (307)
                      +++..+|..++|+||+....              ...|.+......+.++||||||++.+++.+.++..++..+      
T Consensus        97 ~~~~~lK~~~~r~RP~~~~~--------------~~~~~~~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~------  156 (230)
T 2ipb_A           97 YATASAKKYYMRTRPFVLFN--------------HSTCRPEDENTLRKDGSYPSGHDAYSTLLALVLSQARPER------  156 (230)
T ss_dssp             TTTHHHHHHHCCCCHHHHTT--------------CCCSCGGGHHHHHTSCCSSCHHHHHHHHHHHHHHHHCGGG------
T ss_pred             HHHHHHHHHhCCCCcCccCC--------------CCeeccCcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHH------
Confidence            78999999999999985421              0112211111235789999999999999888776653211      


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHhCCCCChhHhHHHHHHHHHHHHHH
Q 021787          192 RGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFC  240 (307)
Q Consensus       192 ~~~~~~~~l~~~~l~~a~lv~~SRv~~g~H~~sDVl~G~~lG~~~a~~~  240 (307)
                          +.     ..+.++.++|+||||+|+||++||++|+++|..++...
T Consensus       157 ----~~-----~~~~~a~~v~~SRv~~G~H~~sDVlaG~~lG~~~~~~~  196 (230)
T 2ipb_A          157 ----AQ-----ELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARL  196 (230)
T ss_dssp             ----HH-----HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHH
T ss_pred             ----HH-----HHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHH
Confidence                11     12457889999999999999999999999999988765
>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A Back     alignment and structure
>1qi9_A Protein (vanadium bromoperoxidase); haloperoxidase, oxidoreductase; 2.05A {Ascophyllum nodosum} SCOP: a.111.1.2 Back     alignment and structure
>1up8_A Vanadium-dependent bromoperoxidase 1; haloperoxidase, vanadate; 2.20A {Corallina pilulifera} SCOP: a.111.1.2 PDB: 1qhb_A Back     alignment and structure
>3bb0_A Vanadium chloroperoxidase; protein phosphate-intermediate complex, phospatase activity, chloride, metal-binding, oxidoreductase, secreted; 1.50A {Curvularia inaequalis} PDB: 1vns_A 1vnc_A 1vni_A 1idq_A 1vne_A 1vnf_A 1idu_A 1vng_A 1vnh_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 307
d1d2ta_224 a.111.1.1 (A:) Bacterial acid phosphatase {Escheri 2e-10
>d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia blattae [TaxId: 563]} Length = 224 Back     information, alignment and structure

class: All alpha proteins
fold: Acid phosphatase/Vanadium-dependent haloperoxidase
superfamily: Acid phosphatase/Vanadium-dependent haloperoxidase
family: Type 2 phosphatidic acid phosphatase, PAP2
domain: Bacterial acid phosphatase
species: Escherichia blattae [TaxId: 563]

 Score = 57.8 bits (139), Expect = 2e-10
 Identities = 26/126 (20%), Positives = 39/126 (30%), Gaps = 29/126 (23%)

Query: 111 GVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSW 170
            + T + KD   R RP                      C          + S+PSGHTS 
Sbjct: 102 DLATRSAKDHYMRIRPF--------------AFYGVSTCNTTEQDKLSKNGSYPSGHTSI 147

Query: 171 SFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGA 230
            +A    L+           +R +                +G SRV   +H   DV    
Sbjct: 148 GWATALVLAEI-------NPQRQN--------EILKRGYELGQSRVICGYHWQSDVDAAR 192

Query: 231 IIGTIV 236
           ++G+ V
Sbjct: 193 VVGSAV 198

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query307
d1d2ta_224 Bacterial acid phosphatase {Escherichia blattae [T 99.67
d1vnsa_574 Chloroperoxidase {Curvularia inaequalis [TaxId: 38 97.07
d1qi9a_555 Haloperoxidase (bromoperoxidase) {Ascophyllum nodo 93.91
d1qhba_595 Haloperoxidase (bromoperoxidase) {Red algae (Coral 92.71
>d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia blattae [TaxId: 563]} Back     information, alignment and structure
class: All alpha proteins
fold: Acid phosphatase/Vanadium-dependent haloperoxidase
superfamily: Acid phosphatase/Vanadium-dependent haloperoxidase
family: Type 2 phosphatidic acid phosphatase, PAP2
domain: Bacterial acid phosphatase
species: Escherichia blattae [TaxId: 563]

Probab=99.67  E-value=2.9e-17  Score=142.09  Aligned_cols=99  Identities=26%  Similarity=0.259  Sum_probs=70.5

Q ss_pred             HHHHHHHhhhCCCCCccccccCCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHHHHhhccccccC
Q 021787          112 VITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDR  191 (307)
Q Consensus       112 ~~~~~lK~~~grpRP~~l~~c~p~~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~l~l~~~~~~~~~  191 (307)
                      +.+...|..++|+||+....              ...|..........+.||||||++.+++.+.+++..+..+      
T Consensus       103 ~a~~~~K~~~~R~RP~~~~~--------------~~~~~~~~~~~~~~~~SfPSGHa~~a~~~a~~la~~~p~~------  162 (224)
T d1d2ta_         103 LATRSAKDHYMRIRPFAFYG--------------VSTCNTTEQDKLSKNGSYPSGHTSIGWATALVLAEINPQR------  162 (224)
T ss_dssp             TTTHHHHHHHCCCCHHHHHT--------------CCCSCC--CCCCCSSCCSSCHHHHHHHHHHHHHHHHCGGG------
T ss_pred             HHHHHHHHHHcCCChhhhcC--------------cCCCCccccccCCCCCCcCchhHHHHHHHHHHHHHHhHHH------
Confidence            45678999999999974311              1122221222235678999999999998888877654322      


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHhCCCCChhHhHHHHHHHHHHHHH
Q 021787          192 RGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFF  239 (307)
Q Consensus       192 ~~~~~~~~l~~~~l~~a~lv~~SRv~~g~H~~sDVl~G~~lG~~~a~~  239 (307)
                          +.     ..+.++..+|.|||+.|+||+|||++|.++|..++..
T Consensus       163 ----~~-----~~~~~a~~~~~SRv~~g~H~~sDv~aG~~lG~ai~a~  201 (224)
T d1d2ta_         163 ----QN-----EILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVAT  201 (224)
T ss_dssp             ----HH-----HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred             ----HH-----HHHHHHHHhhhHHHHcccccHHHHHHHHHHHHHHHHH
Confidence                11     2245778999999999999999999999999876543
>d1vnsa_ a.111.1.3 (A:) Chloroperoxidase {Curvularia inaequalis [TaxId: 38902]} Back     information, alignment and structure
>d1qi9a_ a.111.1.2 (A:) Haloperoxidase (bromoperoxidase) {Ascophyllum nodosum [TaxId: 52969]} Back     information, alignment and structure
>d1qhba_ a.111.1.2 (A:) Haloperoxidase (bromoperoxidase) {Red algae (Corallina officinalis) [TaxId: 35170]} Back     information, alignment and structure