Citrus Sinensis ID: 021795


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------
MHAKTDSEGTSINDATWPPRSPPRRPIYYVQSPSHPDVEKMSYGSSPMGSPAHHYYHCSPIHHSRESSTSRFSASLKNPRGVSAWRHVQLDHKDGDGDGDDEEMDGRDEGSGRNVRLYVCIGFFFVLLFTVFCLILWGASKPYKPKIIVKNIVFENFNVQAGSDESGVPTDMLSLNSTVKILYRNPATFFAVHVTSTPLELHYFQLKLASGQMKKFSQSRKSQRNVVTVVQGYQVPLYGGVPVLASAKGHLDRAEVPLNLTFVMRSRAYILGRLVKSKFYRRIRCSVTLRGNKLGKPLNLTNACFYQ
cccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHEEEEEcccccEEEEEEEEEEEEEEccccccccccccEEEEEEEEEEEEEccccEEEEEEEccEEEEEEccEEEEEcccccEEEcccccEEEEEEEEEEEEEccccccHHHHcccccccEEEEEEEEEEEEEEEEEEcEEEEEEEEEEEEEEEEEEcccccccEEccccEEEc
ccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEEEcccccccccccEEEEEEEEEEEEEccccEEEEEEccccEEEEEccEEEEccccccccccccccEEEEEEEEEcEEEEccccccccccccccccccEEEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEEccccccccEEEccccEcc
mhaktdsegtsindatwpprspprrpiyyvqspshpdvekmsygsspmgspahhyyhcspihhsresstsrfsaslknprgvsawrhvqldhkdgdgdgddeemdgrdegsgrnvRLYVCIGFFFVLLFTVFCLILwgaskpykpkiiVKNIVFEnfnvqagsdesgvptdmlslnstvkilyrnpatfFAVHVTSTPLELHYFQLKLASgqmkkfsqsrksqrNVVTVVQGyqvplyggvpvlasakghldraevplnlTFVMRSRAYILGRLVKSKFYRRIRCSVtlrgnklgkplnltnacfyq
mhaktdsegtsindatwpprsppRRPIYYVQSPSHPDVEKMSYGSSPMGSPAHHYYHCSPIHHSRESSTSRFSASLKNprgvsawrhvqldhkdgdgdgddeeMDGRDEGSGRNVRLYVCIGFFFVLLFTVFCLILWGASKPYKPKIIVKNIVFENFNVqagsdesgvptDMLSLNSTVKILYRNPATFFAVHVTSTPLELHYFQLKLASGQMKkfsqsrksqrnVVTVVQGYQVPLYGGVPVLASAKGHLDRAEVPlnltfvmrsrayilgrlvkskfyrrIRCSvtlrgnklgkplnltnacfyq
MHAKTDSEGTSINDATWpprspprrpIYYVQSPSHPDVEKMSYGSSPMGSPAHHYYHCSPIHHsresstsrfsasLKNPRGVSAWRHVQLDHKdgdgdgddeemdgrdegsgRNVRLYVCIGfffvllftvfCLILWGASKPYKPKIIVKNIVFENFNVQAGSDESGVPTDMLSLNSTVKILYRNPATFFAVHVTSTPLELHYFQLKLASGQMKKFSQSRKSQRNVVTVVQGYQVPLYGGVPVLASAKGHLDRAEVPLNLTFVMRSRAYILGRLVKSKFYRRIRCSVTLRGNKLGKPLNLTNACFYQ
*****************************************************************************************************************NVRLYVCIGFFFVLLFTVFCLILWGASKPYKPKIIVKNIVFENFNVQAGS***GVPTDMLSLNSTVKILYRNPATFFAVHVTSTPLELHYFQLKLAS**************NVVTVVQGYQVPLYGGVPVLASAKGHLDRAEVPLNLTFVMRSRAYILGRLVKSKFYRRIRCSVTLRGNKLGKPLNLTNACFY*
***************************************************************************************************************GRNVRLYVCIGFFFVLLFTVFCLILWGASKPYKPKIIVKNIVFENFNVQAGSDESGVPTDMLSLNSTVKILYRNPATFFAVHVTSTPLELHYFQLKLASGQMK*********RNVVTVVQGYQVPLYGG**************EVPLNLTFVMRSRAYILGRLVKSKFYRRIRCSVTLRGN******NLTNACFY*
***********INDATWPPRSPPRRPIYYVQSPSHPDVEKMSYGSSPMGSPAHHYYHCSPI********************VSAWRHVQLDHKDGD**************SGRNVRLYVCIGFFFVLLFTVFCLILWGASKPYKPKIIVKNIVFENFNVQAGSDESGVPTDMLSLNSTVKILYRNPATFFAVHVTSTPLELHYFQLKLASG*************NVVTVVQGYQVPLYGGVPVLASAKGHLDRAEVPLNLTFVMRSRAYILGRLVKSKFYRRIRCSVTLRGNKLGKPLNLTNACFYQ
***********************RRPIY**********************************************************************************SGRNVRLYVCIGFFFVLLFTVFCLILWGASKPYKPKIIVKNIVFENFNVQAGSDESGVPTDMLSLNSTVKILYRNPATFFAVHVTSTPLELHYFQLKLASGQMKKFSQSRKSQRNVVTVVQGYQVPLYGGVPVLASAKGHLDRAEVPLNLTFVMRSRAYILGRLVKSKFYRRIRCSVTLRGNKLGKPLNLTNACFYQ
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MHAKTDSEGTSINDATWPPRSPPRRPIYYVQSPSHPDVEKMSYGSSPMGSPAHHYYHCSPIHHSRESSTSRFSASLKNPRGVSAWRHVQLDHKDGDGDGDDEEMDGRDEGSGRNVRLYVCIGFFFVLLFTVFCLILWGASKPYKPKIIVKNIVFENFNVQAGSDESGVPTDMLSLNSTVKILYRNPATFFAVHVTSTPLELHYFQLKLASGQMKKFSQSRKSQRNVVTVVQGYQVPLYGGVPVLASAKGHLDRAEVPLNLTFVMRSRAYILGRLVKSKFYRRIRCSVTLRGNKLGKPLNLTNACFYQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query307
255575029313 hypothetical protein RCOM_0615680 [Ricin 0.993 0.974 0.774 1e-138
224105093305 predicted protein [Populus trichocarpa] 0.990 0.996 0.735 1e-120
225428243310 PREDICTED: uncharacterized protein LOC10 0.983 0.974 0.652 1e-105
147834019305 hypothetical protein VITISV_027982 [Viti 0.967 0.973 0.639 1e-101
356544006317 PREDICTED: uncharacterized protein LOC10 1.0 0.968 0.651 5e-99
297744504292 unnamed protein product [Vitis vinifera] 0.859 0.904 0.656 2e-95
356538522321 PREDICTED: uncharacterized protein LOC10 1.0 0.956 0.665 3e-90
449454263315 PREDICTED: uncharacterized protein LOC10 0.990 0.965 0.604 8e-85
15227481297 uncharacterized protein [Arabidopsis tha 0.954 0.986 0.587 8e-82
297824161298 hypothetical protein ARALYDRAFT_903544 [ 0.947 0.976 0.576 2e-81
>gi|255575029|ref|XP_002528420.1| hypothetical protein RCOM_0615680 [Ricinus communis] gi|223532156|gb|EEF33962.1| hypothetical protein RCOM_0615680 [Ricinus communis] Back     alignment and taxonomy information
 Score =  495 bits (1275), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/315 (77%), Positives = 273/315 (86%), Gaps = 10/315 (3%)

Query: 1   MHAKTDSEGTSINDATWPPRSPPRRPIYYVQSPSHPDVEKMSYGSSPMGSPAHHYYHCSP 60
           MHAKTDSEGTS+ D +W PRSP RRP+YYVQSPS+ DVEKMSYGSSP GSPAHHYYHCSP
Sbjct: 1   MHAKTDSEGTSV-DTSWAPRSP-RRPVYYVQSPSNHDVEKMSYGSSPTGSPAHHYYHCSP 58

Query: 61  IHHSRESSTSRFSASLKNPRGVSAWRHVQLDH------KDGDGDGDDEEMDGR--DEGSG 112
           IHHSRESSTSRFSASLKNPR +SAW+HVQ++H       D D D +  EM GR    GS 
Sbjct: 59  IHHSRESSTSRFSASLKNPRSLSAWKHVQINHGHDDDDDDDDDDDNGGEMGGRYYGHGSA 118

Query: 113 RNVRLYVCIGFFFVLLFTVFCLILWGASKPYKPKIIVKNIVFENFNVQAGSDESGVPTDM 172
           RN+RLY+C   FFVLLFT+FCLILWGASK YKP+IIVKNIVFENFNVQAG+D++GVPTDM
Sbjct: 119 RNIRLYICGFLFFVLLFTIFCLILWGASKAYKPQIIVKNIVFENFNVQAGNDQTGVPTDM 178

Query: 173 LSLNSTVKILYRNPATFFAVHVTSTPLELHYFQLKLASGQMKKFSQSRKSQRNVVTVVQG 232
           LSLNSTVKI YRNPATFFAVHVTSTPLELHY+QLK+ASGQMKKF+QSRKSQR V TVV  
Sbjct: 179 LSLNSTVKIHYRNPATFFAVHVTSTPLELHYYQLKIASGQMKKFTQSRKSQRKVTTVVHA 238

Query: 233 YQVPLYGGVPVLASAKGHLDRAEVPLNLTFVMRSRAYILGRLVKSKFYRRIRCSVTLRGN 292
            Q+PLYGGVP+LASAK H+++  VPLNLTFV+RSRAYILGRLVKSKFY+R+RC VTL GN
Sbjct: 239 SQIPLYGGVPLLASAKEHIEKVAVPLNLTFVVRSRAYILGRLVKSKFYKRVRCPVTLHGN 298

Query: 293 KLGKPLNLTNACFYQ 307
           KLGKPLNLT++C Y 
Sbjct: 299 KLGKPLNLTHSCVYH 313




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105093|ref|XP_002313684.1| predicted protein [Populus trichocarpa] gi|222850092|gb|EEE87639.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225428243|ref|XP_002279423.1| PREDICTED: uncharacterized protein LOC100258993 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147834019|emb|CAN73167.1| hypothetical protein VITISV_027982 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356544006|ref|XP_003540447.1| PREDICTED: uncharacterized protein LOC100783160 [Glycine max] Back     alignment and taxonomy information
>gi|297744504|emb|CBI37766.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356538522|ref|XP_003537752.1| PREDICTED: uncharacterized protein LOC100817846 [Glycine max] Back     alignment and taxonomy information
>gi|449454263|ref|XP_004144875.1| PREDICTED: uncharacterized protein LOC101215215 [Cucumis sativus] gi|449472377|ref|XP_004153575.1| PREDICTED: uncharacterized protein LOC101214445 [Cucumis sativus] gi|449525255|ref|XP_004169633.1| PREDICTED: uncharacterized protein LOC101225107 [Cucumis sativus] Back     alignment and taxonomy information
>gi|15227481|ref|NP_181730.1| uncharacterized protein [Arabidopsis thaliana] gi|1871184|gb|AAB63544.1| unknown protein [Arabidopsis thaliana] gi|89000925|gb|ABD59052.1| At2g41990 [Arabidopsis thaliana] gi|330254965|gb|AEC10059.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297824161|ref|XP_002879963.1| hypothetical protein ARALYDRAFT_903544 [Arabidopsis lyrata subsp. lyrata] gi|297325802|gb|EFH56222.1| hypothetical protein ARALYDRAFT_903544 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query307
TAIR|locus:2064637297 AT2G41990 "AT2G41990" [Arabido 0.951 0.983 0.511 3.2e-72
TAIR|locus:2132811299 AT4G35170 "AT4G35170" [Arabido 0.895 0.919 0.473 7.3e-59
TAIR|locus:2825837342 AT1G45688 "AT1G45688" [Arabido 0.371 0.333 0.556 4.1e-52
TAIR|locus:2160026320 AT5G42860 "AT5G42860" [Arabido 0.345 0.331 0.575 2.4e-50
TAIR|locus:2103454271 AT3G08490 "AT3G08490" [Arabido 0.498 0.564 0.229 1.2e-05
TAIR|locus:2064637 AT2G41990 "AT2G41990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
 Identities = 157/307 (51%), Positives = 193/307 (62%)

Query:     1 MHAKTDSEGTSINDATWXXXXXXXXXIYYVQSPSHPDVEKMSYGS--SPMGSPAH-HYYH 57
             MHAKTDSE TSI+ A           +YYVQSPS+ DVEKMS+GS  S MGSP H HYYH
Sbjct:     1 MHAKTDSEATSIDAAALSPPRSAIRPLYYVQSPSNHDVEKMSFGSGCSLMGSPTHPHYYH 60

Query:    58 CSPIHHXXXXXXXXXXXXLKNPRGVSAWRHVQLDHKXXXXXXXXXXXXXXXXXXXRNVRL 117
             CSPIHH              + R + +++ ++ + +                   RNVRL
Sbjct:    61 CSPIHHSRESSTSRF-----SDRALLSYKSIR-ERRRYINDGDDKTDGGDDDDPFRNVRL 114

Query:   118 YVCIGXXXXXXXXXXCLILWGASKPYKPKIIVKNIVFENFNVQAGSDESGVPTDMLSLNS 177
             YV +            LILWGASK Y PK+ VK ++  + N+QAG+D SGVPTDMLSLNS
Sbjct:   115 YVWLLLSVIFLFTVFSLILWGASKSYPPKVTVKGMLVRDLNLQAGNDLSGVPTDMLSLNS 174

Query:   178 TVKILYRNPATFFAVHVTSTPLELHYFQLKLASGQMKKFSQSRKSQRNVVTVVQGYQVPL 237
             TV+I YRNP+TFFAVHVT++PL LHY  L L+SG+M KF+  R  + NVVTVVQG+Q+PL
Sbjct:   175 TVRIYYRNPSTFFAVHVTASPLLLHYSNLLLSSGEMNKFTVGRNGETNVVTVVQGHQIPL 234

Query:   238 YGGVPVLASAKGHLDRAEVPLNLTFVMRSRAYILGRLVKSKFYRRIRCSVTLRGNKLGKP 297
             YGGV        HLD   +PLNLT V+ S+AYILGRLV SKFY RI CS TL  N L K 
Sbjct:   235 YGGVSF------HLDTLSLPLNLTIVLHSKAYILGRLVTSKFYTRIICSFTLDANHLPKS 288

Query:   298 LNLTNAC 304
             ++L  +C
Sbjct:   289 ISLLRSC 295




GO:0003674 "molecular_function" evidence=ND
GO:0005575 "cellular_component" evidence=ND
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2132811 AT4G35170 "AT4G35170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825837 AT1G45688 "AT1G45688" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160026 AT5G42860 "AT5G42860" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2103454 AT3G08490 "AT3G08490" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 307
PLN03160219 uncharacterized protein; Provisional 99.97
PF03168101 LEA_2: Late embryogenesis abundant protein; InterP 99.36
smart00769100 WHy Water Stress and Hypersensitive response. 97.56
PF07092238 DUF1356: Protein of unknown function (DUF1356); In 97.16
PF12751387 Vac7: Vacuolar segregation subunit 7; InterPro: IP 96.46
COG5608161 LEA14-like dessication related protein [Defense me 93.17
TIGR02588122 conserved hypothetical protein TIGR02588. The func 81.91
>PLN03160 uncharacterized protein; Provisional Back     alignment and domain information
Probab=99.97  E-value=7.1e-30  Score=233.04  Aligned_cols=170  Identities=11%  Similarity=0.168  Sum_probs=137.2

Q ss_pred             HHHHHHHHHheeeEEEeecCCcEEEEEeEEEEeEEecCCCCCCCCCcceeEEEEEEEEEEecCCCeEEEEEcCceEEEEE
Q 021795          124 FFVLLFTVFCLILWGASKPYKPKIIVKNIVFENFNVQAGSDESGVPTDMLSLNSTVKILYRNPATFFAVHVTSTPLELHY  203 (307)
Q Consensus       124 ~~vll~gv~~LIlWlv~RP~~P~f~V~s~~v~~f~v~~g~d~sgvpt~~lt~n~tv~vt~rNPN~~fGI~Y~s~~v~l~Y  203 (307)
                      ++++|+++++.++|+++||+.|+|+|.+++|++|++..+.    .+...++++++++|+++|||. +||+|++.++.++|
T Consensus        46 ~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~----~~~~~~n~tl~~~v~v~NPN~-~~~~Y~~~~~~v~Y  120 (219)
T PLN03160         46 TLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNT----TLRPGTNITLIADVSVKNPNV-ASFKYSNTTTTIYY  120 (219)
T ss_pred             HHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCC----CCceeEEEEEEEEEEEECCCc-eeEEEcCeEEEEEE
Confidence            3666677888889999999999999999999999996521    123345666777889999998 89999999999999


Q ss_pred             ccEEeecccCCcceecCCCeeEEEEEEEeeeeeeCCCcchhhhhccCCCcceEEEEEEEEEEEEEEEEeEEEeeeEeEEE
Q 021795          204 FQLKLASGQMKKFSQSRKSQRNVVTVVQGYQVPLYGGVPVLASAKGHLDRAEVPLNLTFVMRSRAYILGRLVKSKFYRRI  283 (307)
Q Consensus       204 ~~~~lasg~lp~FyQ~~kstt~v~v~v~g~~vpLygag~~L~~~~~~~~~g~VpL~L~~~vr~R~kVlG~lv~~k~~~~V  283 (307)
                      +|+.||.+.+|+|||++++++.+.+.+.....-+.. +..|..+..   +|.+||+++++++.|++| |++.+++++.+|
T Consensus       121 ~g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~-~~~L~~D~~---~G~v~l~~~~~v~gkVkv-~~i~k~~v~~~v  195 (219)
T PLN03160        121 GGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILS-VPGLLTDIS---SGLLNMNSYTRIGGKVKI-LKIIKKHVVVKM  195 (219)
T ss_pred             CCEEEEEEEcCCcccCCCCeEEEEEEEEEEeceecc-chhHHHHhh---CCeEEEEEEEEEEEEEEE-EEEEEEEEEEEE
Confidence            999999999999999999999988876543221211 455655543   789999999999999995 678899999999


Q ss_pred             EEEEEEcCCCCCCCccc-cCCceeC
Q 021795          284 RCSVTLRGNKLGKPLNL-TNACFYQ  307 (307)
Q Consensus       284 ~C~l~v~~~~~~~~i~~-~~~C~~~  307 (307)
                      +|+++|+..    ...+ ...|+++
T Consensus       196 ~C~v~V~~~----~~~i~~~~C~~~  216 (219)
T PLN03160        196 NCTMTVNIT----SQAIQGQKCKRH  216 (219)
T ss_pred             EeEEEEECC----CCEEeccEeccc
Confidence            999999853    2345 6789763



>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ] Back     alignment and domain information
>smart00769 WHy Water Stress and Hypersensitive response Back     alignment and domain information
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length Back     alignment and domain information
>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance [] Back     alignment and domain information
>COG5608 LEA14-like dessication related protein [Defense mechanisms] Back     alignment and domain information
>TIGR02588 conserved hypothetical protein TIGR02588 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query307
1yyc_A174 LEA protein, putative late embryogenesis abundant 97.78
1xo8_A151 AT1G01470; structural genomics, protein structure 96.81
3but_A136 Uncharacterized protein AF_0446; lipid binding pro 96.19
>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana} Back     alignment and structure
Probab=97.78  E-value=9.4e-05  Score=64.60  Aligned_cols=112  Identities=13%  Similarity=0.156  Sum_probs=81.1

Q ss_pred             CCcEEEEEeEEEEeEEecCCCCCCCCCcceeEEEEEEEEEEecCCCeEEEEEcCceEEEEEccEEeecccCCc-ceecCC
Q 021795          143 YKPKIIVKNIVFENFNVQAGSDESGVPTDMLSLNSTVKILYRNPATFFAVHVTSTPLELHYFQLKLASGQMKK-FSQSRK  221 (307)
Q Consensus       143 ~~P~f~V~s~~v~~f~v~~g~d~sgvpt~~lt~n~tv~vt~rNPN~~fGI~Y~s~~v~l~Y~~~~lasg~lp~-FyQ~~k  221 (307)
                      .+|+++|.++.+..+....             ..+.+++.+.|||. +.|-+......+.-++..||+|..+. +--+++
T Consensus        43 ~~PeV~v~~v~~~~~~l~~-------------~~~~l~LrV~NPN~-~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~  108 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRDG-------------VDYHAKVSVKNPYS-QSIPICQISYILKSATRTIASGTIPDPGSLVGS  108 (174)
T ss_dssp             CCCEEEEEEEEEEEECSSS-------------EEEEEEEEEEECSS-SCCBCCSEEEEEEESSSCEEEEEESCCCBCCSS
T ss_pred             CCCEEEEEEeEEeccccce-------------EEEEEEEEEECCCC-CCccccceEEEEEECCEEEEEEecCCCceECCC
Confidence            8999999999999876642             33456889999998 69999999999999999999999855 778999


Q ss_pred             CeeEEEEEEEeeeeeeCCCcchhhhhccCCCcceEEEEEEEEEEEEEEEEeEE
Q 021795          222 SQRNVVTVVQGYQVPLYGGVPVLASAKGHLDRAEVPLNLTFVMRSRAYILGRL  274 (307)
Q Consensus       222 stt~v~v~v~g~~vpLygag~~L~~~~~~~~~g~VpL~L~~~vr~R~kVlG~l  274 (307)
                      +++++.+.+.-.-.-|.   ..+   .+......+|.+|++.+.+..-++|.+
T Consensus       109 g~~~v~Vpv~v~~~~l~---~~~---~~l~~~~~i~Y~L~g~L~id~pv~G~~  155 (174)
T 1yyc_A          109 GTTVLDVPVKVAYSIAV---SLM---KDMCTDWDIDYQLDIGLTFDIPVVGDI  155 (174)
T ss_dssp             EEEEEEEEEEESHHHHH---HTC---CCCCSSEEECEEEEEEEEEECTTSSEE
T ss_pred             CcEEEEEEEEEEHHHHH---HHH---HhcCCCCccceEEEEEEEeccCCcCCE
Confidence            99999988776421111   111   111114688888888765443224543



>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1 Back     alignment and structure
>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query307
d1xo8a_151 Putative dessication related protein LEA14 {Thale 97.52
>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.52  E-value=4.4e-06  Score=69.25  Aligned_cols=114  Identities=14%  Similarity=0.142  Sum_probs=80.4

Q ss_pred             eecCCcEEEEEeEEEEeEEecCCCCCCCCCcceeEEEEEEEEEEecCCCeEEEEEcCceEEEEEccEEeecccCC-ccee
Q 021795          140 SKPYKPKIIVKNIVFENFNVQAGSDESGVPTDMLSLNSTVKILYRNPATFFAVHVTSTPLELHYFQLKLASGQMK-KFSQ  218 (307)
Q Consensus       140 ~RP~~P~f~V~s~~v~~f~v~~g~d~sgvpt~~lt~n~tv~vt~rNPN~~fGI~Y~s~~v~l~Y~~~~lasg~lp-~FyQ  218 (307)
                      .+=++|++++.++.+.++...             ..++.+++.+.|||. |+|.+......|+.++..+|+|..+ .+--
T Consensus        17 ~~~~kPev~l~~v~i~~v~~~-------------~~~l~~~l~V~NPN~-~~l~i~~l~y~l~~~g~~ia~G~~~~~~~i   82 (151)
T d1xo8a_          17 TAIPKPEGSVTDVDLKDVNRD-------------SVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGKIPDPGSL   82 (151)
T ss_dssp             CCCCSCCCBCSEEEECCCTTT-------------EECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEEEEECCCC
T ss_pred             cCCCCCeEEEEEEEeeecccc-------------eEEEEEEEEEECCCC-CceeeeeEEEEEEECCEEEEeEecCCCcEE
Confidence            355789999999988876553             234566889999998 6999999999999999999999874 4677


Q ss_pred             cCCCeeEEEEEEEeeeeeeCCCcchhhhhccCCCcceEEEEEEEEEEEEEEEEeE
Q 021795          219 SRKSQRNVVTVVQGYQVPLYGGVPVLASAKGHLDRAEVPLNLTFVMRSRAYILGR  273 (307)
Q Consensus       219 ~~kstt~v~v~v~g~~vpLygag~~L~~~~~~~~~g~VpL~L~~~vr~R~kVlG~  273 (307)
                      +.++++.+.+.+...-.-|   ...+.....   ...++.+|++.+.+..-|+|.
T Consensus        83 pa~~~~~v~vpv~v~~~~l---~~~~~~i~~---~~~i~Y~l~g~l~~d~pv~G~  131 (151)
T d1xo8a_          83 KAKDMTALDIPVVVPYSIL---FNLARDVGV---DWDIDYELQIGLTIDLPVVGE  131 (151)
T ss_dssp             SSSSEEEEEECCCEEHHHH---HHHHHHHHH---HSEEEEEEEEEEEECCTTTSS
T ss_pred             cCCCcEEEEEEEEEEHHHH---HHHHHhhcc---CCCccEEEEEEEEEecCccCc
Confidence            8899999998766532112   222222111   346888877777655433453