Citrus Sinensis ID: 021808

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------
MLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKERAWGSSLNTESLLEHGNSS
cccccHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHcccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccccHHHHHccccc
ccHHHHHHHHHHHHHHHHcccccHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccHHHHccccccHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccEEEEcHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccccccHHcccccc
MLGVSAVPAIIQFVLMLfmpesprwlfmksDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRLAFLAGAGLQAFQQftgintvmyysptiVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFisgssasssgvYGWIAVIGLALYIAFfapgmgpvpwtlnsevypeqyrgicggmsATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFvpetqgltfLEVEQMWKErawgsslntesllehgnss
MLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEeelrkkktvrylDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKERawgsslntesllehgnss
MLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRlaflagaglqafqqftgINTVMYYSPTIVQMAGFQSNQlalllslavaGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIsgssasssgVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATflilagiavlavvfvilfvPETQGLTFLEVEQMWKERAWGSSLNTESLLEHGNSS
****SAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKERAWG***************
MLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEID*******************DVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQ***********************
MLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKERAWGSSLNT**********
MLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKERA*****************
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDxxxxxxxxxxxxxxxxxxxxxKKTVRYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKERAWGSSLNTESLLEHGNSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query307 2.2.26 [Sep-21-2011]
Q8VZR6509 Inositol transporter 1 OS yes no 1.0 0.603 0.776 1e-138
Q9C757580 Probable inositol transpo no no 0.553 0.293 0.526 5e-45
Q01440547 Membrane transporter D1 O N/A no 0.905 0.508 0.350 4e-43
C0SPB2457 Putative metabolite trans yes no 0.902 0.606 0.357 6e-42
P30606609 Myo-inositol transporter yes no 0.915 0.461 0.334 1e-41
P46333461 Probable metabolite trans no no 0.889 0.592 0.366 2e-40
P45598472 Arabinose-proton symporte yes no 0.895 0.582 0.332 9e-38
P30605584 Myo-inositol transporter no no 0.918 0.482 0.338 3e-37
Q9ZNS0508 Probable polyol transport no no 0.921 0.557 0.322 1e-36
P0AE24472 Arabinose-proton symporte N/A no 0.895 0.582 0.325 2e-36
>sp|Q8VZR6|INT1_ARATH Inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=1 SV=1 Back     alignment and function desciption
 Score =  492 bits (1266), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 246/317 (77%), Positives = 273/317 (86%), Gaps = 10/317 (3%)

Query: 1   MLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAE 60
           MLGVS VPA+IQF+LMLFMPESPRWLFMK+ K +AI VL++ YDI+RLEDEIDHLSAA E
Sbjct: 193 MLGVSGVPAVIQFILMLFMPESPRWLFMKNRKAEAIQVLARTYDISRLEDEIDHLSAAEE 252

Query: 61  EELRKKKTVRYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQL 120
           EE ++K+TV YLDVF+SKE+RLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGF SNQL
Sbjct: 253 EEKQRKRTVGYLDVFRSKELRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFHSNQL 312

Query: 121 ALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS- 179
           AL LSL VA  NA GT+VGIY IDH GRKKLALSSL GVIISL++LS +F   S  SS  
Sbjct: 313 ALFLSLIVAAMNAAGTVVGIYFIDHCGRKKLALSSLFGVIISLLILSVSFFKQSETSSDG 372

Query: 180 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 239
           G+YGW+AV+GLALYI FFAPGMGPVPWT+NSE+YP+QYRGICGGMSATVNWISNLIVAQT
Sbjct: 373 GLYGWLAVLGLALYIVFFAPGMGPVPWTVNSEIYPQQYRGICGGMSATVNWISNLIVAQT 432

Query: 240 FLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKERA------WGS 293
           FLT+AE  GTG TFLILAGIAVLAV+FVI+FVPETQGLTF EVEQ+WKERA      WGS
Sbjct: 433 FLTIAEAAGTGMTFLILAGIAVLAVIFVIVFVPETQGLTFSEVEQIWKERAYGNISGWGS 492

Query: 294 SL---NTESLLEHGNSS 307
           S    N E LLE G+ S
Sbjct: 493 SSDSNNMEGLLEQGSQS 509
Vacuolar inositol-proton symporter involved in the release of myo-inositol from vacuoles. Not involved in glucose or fructose transport.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9C757|INT2_ARATH Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=1 SV=1 Back     alignment and function description
>sp|Q01440|GTR1_LEIDO Membrane transporter D1 OS=Leishmania donovani PE=3 SV=1 Back     alignment and function description
>sp|C0SPB2|YWTG_BACSU Putative metabolite transport protein YwtG OS=Bacillus subtilis (strain 168) GN=ywtG PE=3 SV=1 Back     alignment and function description
>sp|P30606|ITR2_YEAST Myo-inositol transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ITR2 PE=1 SV=2 Back     alignment and function description
>sp|P46333|CSBC_BACSU Probable metabolite transport protein CsbC OS=Bacillus subtilis (strain 168) GN=csbC PE=1 SV=3 Back     alignment and function description
>sp|P45598|ARAE_KLEOX Arabinose-proton symporter OS=Klebsiella oxytoca GN=araE PE=3 SV=1 Back     alignment and function description
>sp|P30605|ITR1_YEAST Myo-inositol transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ITR1 PE=1 SV=2 Back     alignment and function description
>sp|Q9ZNS0|PLT3_ARATH Probable polyol transporter 3 OS=Arabidopsis thaliana GN=PLT3 PE=3 SV=1 Back     alignment and function description
>sp|P0AE24|ARAE_ECOLI Arabinose-proton symporter OS=Escherichia coli (strain K12) GN=araE PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query307
255577741307 sugar transporter, putative [Ricinus com 1.0 1.0 0.804 1e-145
224106503307 predicted protein [Populus trichocarpa] 0.996 0.996 0.784 1e-140
224133102 489 predicted protein [Populus trichocarpa] 0.993 0.623 0.783 1e-139
297824309 521 hypothetical protein ARALYDRAFT_322009 [ 1.0 0.589 0.782 1e-137
2289003 521 putative membrane transporter [Arabidops 1.0 0.589 0.776 1e-137
30689342 509 putative inositol transporter 1 [Arabido 1.0 0.603 0.776 1e-136
449468830 495 PREDICTED: inositol transporter 1-like [ 0.980 0.608 0.770 1e-133
224093162287 predicted protein [Populus trichocarpa] 0.925 0.989 0.795 1e-127
356576905 499 PREDICTED: probable inositol transporter 0.973 0.599 0.717 1e-125
357501429 500 hypothetical protein MTR_7g005910 [Medic 0.996 0.612 0.703 1e-124
>gi|255577741|ref|XP_002529745.1| sugar transporter, putative [Ricinus communis] gi|223530743|gb|EEF32611.1| sugar transporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 247/307 (80%), Positives = 279/307 (90%)

Query: 1   MLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAE 60
           MLGV+ VPA+IQF LML MPESPRWLFMK DK+KA+++++KIYD+ARLEDEIDHL+A+AE
Sbjct: 1   MLGVAGVPAVIQFCLMLCMPESPRWLFMKDDKDKAVIIMAKIYDLARLEDEIDHLAASAE 60

Query: 61  EELRKKKTVRYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQL 120
           EE +K+ TV  +DVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGF SNQL
Sbjct: 61  EESQKRNTVSCMDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFSSNQL 120

Query: 121 ALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180
           ALLLSL VA  NA GTI+GIYLIDHFGR KLALSSL GVI+SL +L+ AF   SS SSSG
Sbjct: 121 ALLLSLIVAAMNAAGTILGIYLIDHFGRTKLALSSLTGVIVSLFILAGAFFGQSSDSSSG 180

Query: 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 240
           +YGW+AV+GLALYIAFFAPGMGPVPWT+NSE+YPE YRGICGGMSATVNWISNLIVAQTF
Sbjct: 181 IYGWLAVVGLALYIAFFAPGMGPVPWTVNSEIYPEAYRGICGGMSATVNWISNLIVAQTF 240

Query: 241 LTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKERAWGSSLNTESL 300
           L+VA  VGTGATFLILAG+A+ A+VF+ILFVPET+GLTF+EVEQ+WKERAWGSS NTESL
Sbjct: 241 LSVANAVGTGATFLILAGVAIAAIVFIILFVPETKGLTFVEVEQIWKERAWGSSYNTESL 300

Query: 301 LEHGNSS 307
           LE GN +
Sbjct: 301 LERGNET 307

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224106503|ref|XP_002333672.1| predicted protein [Populus trichocarpa] gi|222837972|gb|EEE76337.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224133102|ref|XP_002327961.1| predicted protein [Populus trichocarpa] gi|222837370|gb|EEE75749.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297824309|ref|XP_002880037.1| hypothetical protein ARALYDRAFT_322009 [Arabidopsis lyrata subsp. lyrata] gi|297325876|gb|EFH56296.1| hypothetical protein ARALYDRAFT_322009 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|2289003|gb|AAB64332.1| putative membrane transporter [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30689342|ref|NP_850393.1| putative inositol transporter 1 [Arabidopsis thaliana] gi|75331205|sp|Q8VZR6.1|INT1_ARATH RecName: Full=Inositol transporter 1 gi|17380890|gb|AAL36257.1| putative membrane transporter protein [Arabidopsis thaliana] gi|20465939|gb|AAM20155.1| putative membrane transporter protein [Arabidopsis thaliana] gi|84617967|emb|CAJ00303.1| inositol transporter 1 [Arabidopsis thaliana] gi|330255158|gb|AEC10252.1| putative inositol transporter 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449468830|ref|XP_004152124.1| PREDICTED: inositol transporter 1-like [Cucumis sativus] gi|449484700|ref|XP_004156956.1| PREDICTED: inositol transporter 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224093162|ref|XP_002309815.1| predicted protein [Populus trichocarpa] gi|222852718|gb|EEE90265.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356576905|ref|XP_003556570.1| PREDICTED: probable inositol transporter 1-like [Glycine max] Back     alignment and taxonomy information
>gi|357501429|ref|XP_003621003.1| hypothetical protein MTR_7g005910 [Medicago truncatula] gi|124365541|gb|ABN09775.1| General substrate transporter [Medicago truncatula] gi|355496018|gb|AES77221.1| hypothetical protein MTR_7g005910 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query307
TAIR|locus:2058193509 INT1 "inositol transporter 1" 1.0 0.603 0.630 8.2e-99
TAIR|locus:2009832580 INT2 "inositol transporter 2" 0.553 0.293 0.427 4.7e-61
TAIR|locus:2058774580 INT3 "nositol transporter 3" [ 0.553 0.293 0.380 1.8e-51
TAIR|locus:2130689582 INT4 "inositol transporter 4" 0.553 0.292 0.369 1.5e-50
MGI|MGI:2146030637 Slc2a13 "solute carrier family 0.553 0.266 0.344 2.7e-44
RGD|621814637 Slc2a13 "solute carrier family 0.557 0.268 0.335 4.5e-44
UNIPROTKB|Q96QE2648 SLC2A13 "Proton myo-inositol c 0.557 0.263 0.341 3.5e-43
UNIPROTKB|E1BML6648 SLC2A13 "Uncharacterized prote 0.557 0.263 0.335 7.4e-43
UNIPROTKB|F1PGX9652 SLC2A13 "Uncharacterized prote 0.553 0.260 0.344 1.3e-42
TIGR_CMR|CBU_0347463 CBU_0347 "d-xylose-proton symp 0.895 0.593 0.301 9.2e-36
TAIR|locus:2058193 INT1 "inositol transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
 Identities = 200/317 (63%), Positives = 225/317 (70%)

Query:     1 MLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAE 60
             MLGVS VPA+IQF+LMLFMPESPRWLFMK+ K +AI VL++ YDI+RLEDEIDHLSAA E
Sbjct:   193 MLGVSGVPAVIQFILMLFMPESPRWLFMKNRKAEAIQVLARTYDISRLEDEIDHLSAAEE 252

Query:    61 EELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQX 120
             EE ++K+TV YLDVF+SKE+R                 INTVMYYSPTIVQMAGF SNQ 
Sbjct:   253 EEKQRKRTVGYLDVFRSKELRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFHSNQL 312

Query:   121 XXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXX 180
                        NA GT+VGIY IDH GRKKLALSSL GVIISL++LS +F          
Sbjct:   313 ALFLSLIVAAMNAAGTVVGIYFIDHCGRKKLALSSLFGVIISLLILSVSFFKQSETSSDG 372

Query:   181 -VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 239
              +YGW+AV+GLALYI FFAPGMGPVPWT+NSE+YP+QYRGICGGMSATVNWISNLIVAQT
Sbjct:   373 GLYGWLAVLGLALYIVFFAPGMGPVPWTVNSEIYPQQYRGICGGMSATVNWISNLIVAQT 432

Query:   240 FLTVAELVGTGATXXXXXXXXXXXXXXXXXXXPETQGLTFLEVEQMWKERA------WGS 293
             FLT+AE  GTG T                   PETQGLTF EVEQ+WKERA      WGS
Sbjct:   433 FLTIAEAAGTGMTFLILAGIAVLAVIFVIVFVPETQGLTFSEVEQIWKERAYGNISGWGS 492

Query:   294 SL---NTESLLEHGNSS 307
             S    N E LLE G+ S
Sbjct:   493 SSDSNNMEGLLEQGSQS 509
GO:0005215 "transporter activity" evidence=IEA
GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS
GO:0005886 "plasma membrane" evidence=ISM
GO:0006810 "transport" evidence=IEA
GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=ISS
GO:0022857 "transmembrane transporter activity" evidence=IEA
GO:0022891 "substrate-specific transmembrane transporter activity" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005773 "vacuole" evidence=IDA
GO:0005366 "myo-inositol:hydrogen symporter activity" evidence=IDA
GO:0009705 "plant-type vacuole membrane" evidence=IDA
GO:0015798 "myo-inositol transport" evidence=IMP
TAIR|locus:2009832 INT2 "inositol transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2058774 INT3 "nositol transporter 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130689 INT4 "inositol transporter 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:2146030 Slc2a13 "solute carrier family 2 (facilitated glucose transporter), member 13" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|621814 Slc2a13 "solute carrier family 2 (facilitated glucose transporter), member 13" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q96QE2 SLC2A13 "Proton myo-inositol cotransporter" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BML6 SLC2A13 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PGX9 SLC2A13 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0347 CBU_0347 "d-xylose-proton symporter, putative" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8VZR6INT1_ARATHNo assigned EC number0.77601.00.6031yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query307
TIGR00879481 TIGR00879, SP, MFS transporter, sugar porter (SP) 1e-62
pfam00083449 pfam00083, Sugar_tr, Sugar (and other) transporter 8e-62
PRK10077479 PRK10077, xylE, D-xylose transporter XylE; Provisi 4e-44
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 6e-14
TIGR00898505 TIGR00898, 2A0119, cation transport protein 1e-11
TIGR00887502 TIGR00887, 2A0109, phosphate:H+ symporter 1e-09
TIGR00893399 TIGR00893, 2A0114, D-galactonate transporter 3e-09
cd06174 352 cd06174, MFS, The Major Facilitator Superfamily (M 4e-07
TIGR00895398 TIGR00895, 2A0115, benzoate transport 3e-06
pfam07690 346 pfam07690, MFS_1, Major Facilitator Superfamily 3e-04
TIGR00883394 TIGR00883, 2A0106, metabolite-proton symporter 6e-04
COG2814394 COG2814, AraJ, Arabinose efflux permease [Carbohyd 7e-04
TIGR00895 398 TIGR00895, 2A0115, benzoate transport 0.001
pfam07690346 pfam07690, MFS_1, Major Facilitator Superfamily 0.001
pfam13347425 pfam13347, MFS_2, MFS/sugar transport protein 0.002
>gnl|CDD|233165 TIGR00879, SP, MFS transporter, sugar porter (SP) family Back     alignment and domain information 
 Score =  204 bits (522), Expect = 1e-62
 Identities = 111/287 (38%), Positives = 158/287 (55%), Gaps = 8/287 (2%)

Query: 1   MLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYD----IARLEDEIDHLS 56
            LG+  +PA + F+ + F+PESPRWL  K   E+A   L+++         L DE++ + 
Sbjct: 198 PLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELID 257

Query: 57  AAAEEELRKKKTVRYLDVFKSKE-IRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGF 115
                E R  +   +  +F S   IR     G  LQ FQQFTGIN +MYYSPTI + AG 
Sbjct: 258 IKRSIEKRSVQP-SWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGV 316

Query: 116 QSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSS 175
            S   A L+S+ V   N   T V I+L+D FGR+ L L   AG+ I L +L     S  +
Sbjct: 317 -STDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVT 375

Query: 176 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLI 235
            SS    G +A++ + L+IAFFA G GPVPW + SE++P   R     ++   NW++N I
Sbjct: 376 GSSKSS-GNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFI 434

Query: 236 VAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEV 282
           V   F T+ E +G G  F+   G+ VL ++FV  F+PET+G T  E+
Sbjct: 435 VGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLEEI 481

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 481
>gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter Back     alignment and domain information
>gnl|CDD|182225 PRK10077, xylE, D-xylose transporter XylE; Provisional Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|233176 TIGR00898, 2A0119, cation transport protein Back     alignment and domain information
>gnl|CDD|129965 TIGR00887, 2A0109, phosphate:H+ symporter Back     alignment and domain information
>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport Back     alignment and domain information
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information
>gnl|CDD|233168 TIGR00883, 2A0106, metabolite-proton symporter Back     alignment and domain information
>gnl|CDD|225371 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport Back     alignment and domain information
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information
>gnl|CDD|222060 pfam13347, MFS_2, MFS/sugar transport protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 307
KOG0569485 consensus Permease of the major facilitator superf 100.0
KOG0254513 consensus Predicted transporter (major facilitator 100.0
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 99.97
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 99.96
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 99.95
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.94
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.93
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 99.92
TIGR00898505 2A0119 cation transport protein. 99.89
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.85
KOG0255521 consensus Synaptic vesicle transporter SVOP and re 99.83
PRK10642490 proline/glycine betaine transporter; Provisional 99.8
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.67
PRK09952438 shikimate transporter; Provisional 99.66
PRK15075434 citrate-proton symporter; Provisional 99.48
PRK12307426 putative sialic acid transporter; Provisional 99.48
PRK11663434 regulatory protein UhpC; Provisional 99.44
PRK10489417 enterobactin exporter EntS; Provisional 99.42
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.41
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 99.4
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.39
PRK03893496 putative sialic acid transporter; Provisional 99.39
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.38
TIGR00895 398 2A0115 benzoate transport. 99.37
TIGR00891405 2A0112 putative sialic acid transporter. 99.37
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 99.34
TIGR00893399 2A0114 d-galactonate transporter. 99.33
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.33
TIGR00895398 2A0115 benzoate transport. 99.31
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.29
PRK11663 434 regulatory protein UhpC; Provisional 99.29
TIGR00887 502 2A0109 phosphate:H+ symporter. This model represen 99.29
PRK11273 452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.28
TIGR00893 399 2A0114 d-galactonate transporter. 99.28
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.28
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.28
PRK03545 390 putative arabinose transporter; Provisional 99.28
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.28
PRK15403 413 multidrug efflux system protein MdtM; Provisional 99.27
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 99.26
PRK10473 392 multidrug efflux system protein MdtL; Provisional 99.26
TIGR00891 405 2A0112 putative sialic acid transporter. 99.25
PRK15402 406 multidrug efflux system translocase MdfA; Provisio 99.24
PLN00028 476 nitrate transmembrane transporter; Provisional 99.24
PRK10213 394 nepI ribonucleoside transporter; Reviewed 99.24
PRK15462 493 dipeptide/tripeptide permease D; Provisional 99.23
PRK11551 406 putative 3-hydroxyphenylpropionic transporter MhpT 99.23
PRK10054 395 putative transporter; Provisional 99.22
PRK11010491 ampG muropeptide transporter; Validated 99.22
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.22
PRK10077 479 xylE D-xylose transporter XylE; Provisional 99.21
PRK12307 426 putative sialic acid transporter; Provisional 99.19
TIGR00879 481 SP MFS transporter, sugar porter (SP) family. This 99.18
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 99.16
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.16
PRK09874 408 drug efflux system protein MdtG; Provisional 99.15
PRK14995 495 methyl viologen resistance protein SmvA; Provision 99.14
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 99.14
PRK10504 471 putative transporter; Provisional 99.14
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 99.13
PRK11652 394 emrD multidrug resistance protein D; Provisional 99.13
PRK10642 490 proline/glycine betaine transporter; Provisional 99.13
TIGR00903 368 2A0129 major facilitator 4 family protein. This fa 99.12
PRK10406 432 alpha-ketoglutarate transporter; Provisional 99.12
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.12
TIGR00712 438 glpT glycerol-3-phosphate transporter. This model 99.12
TIGR00900 365 2A0121 H+ Antiporter protein. 99.12
PRK09556 467 uhpT sugar phosphate antiporter; Reviewed 99.12
PRK10091 382 MFS transport protein AraJ; Provisional 99.12
PRK03893 496 putative sialic acid transporter; Provisional 99.1
PRK09705393 cynX putative cyanate transporter; Provisional 99.1
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.09
COG2814 394 AraJ Arabinose efflux permease [Carbohydrate trans 99.08
PRK10207 489 dipeptide/tripeptide permease B; Provisional 99.06
TIGR00880141 2_A_01_02 Multidrug resistance protein. 99.06
COG2271 448 UhpC Sugar phosphate permease [Carbohydrate transp 99.06
PRK09528420 lacY galactoside permease; Reviewed 99.06
PRK03545390 putative arabinose transporter; Provisional 99.04
PRK10489 417 enterobactin exporter EntS; Provisional 99.04
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 99.04
TIGR00892 455 2A0113 monocarboxylate transporter 1. 99.03
PRK03699 394 putative transporter; Provisional 99.03
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.02
PRK15075 434 citrate-proton symporter; Provisional 99.02
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 99.02
PRK11646 400 multidrug resistance protein MdtH; Provisional 99.01
PRK11043 401 putative transporter; Provisional 99.0
KOG0569 485 consensus Permease of the major facilitator superf 99.0
TIGR00898 505 2A0119 cation transport protein. 99.0
cd06174 352 MFS The Major Facilitator Superfamily (MFS) is a l 99.0
PRK15034 462 nitrate/nitrite transport protein NarU; Provisiona 98.99
TIGR00890 377 2A0111 Oxalate/Formate Antiporter. 98.97
PLN00028476 nitrate transmembrane transporter; Provisional 98.97
PTZ00207 591 hypothetical protein; Provisional 98.97
TIGR00897402 2A0118 polyol permease family. This family of prot 98.97
PRK05122 399 major facilitator superfamily transporter; Provisi 98.97
TIGR00894 465 2A0114euk Na(+)-dependent inorganic phosphate cotr 98.95
TIGR00901356 2A0125 AmpG-related permease. 98.95
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 98.94
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 98.94
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 98.93
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 98.93
PRK12382 392 putative transporter; Provisional 98.93
TIGR00897 402 2A0118 polyol permease family. This family of prot 98.92
PRK09952 438 shikimate transporter; Provisional 98.92
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.92
PRK11195 393 lysophospholipid transporter LplT; Provisional 98.92
PRK11902402 ampG muropeptide transporter; Reviewed 98.9
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 98.89
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 98.89
TIGR00892455 2A0113 monocarboxylate transporter 1. 98.89
TIGR00899 375 2A0120 sugar efflux transporter. This family of pr 98.89
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 98.89
TIGR00885 410 fucP L-fucose:H+ symporter permease. This family d 98.89
PRK09705 393 cynX putative cyanate transporter; Provisional 98.87
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 98.86
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 98.85
KOG0255 521 consensus Synaptic vesicle transporter SVOP and re 98.85
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 98.85
PRK09584 500 tppB putative tripeptide transporter permease; Rev 98.83
PRK10504471 putative transporter; Provisional 98.82
KOG2615 451 consensus Permease of the major facilitator superf 98.81
KOG2533495 consensus Permease of the major facilitator superf 98.81
PRK05122399 major facilitator superfamily transporter; Provisi 98.8
PRK15011393 sugar efflux transporter B; Provisional 98.79
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 98.79
TIGR00901 356 2A0125 AmpG-related permease. 98.79
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 98.77
PRK11902 402 ampG muropeptide transporter; Reviewed 98.77
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 98.77
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 98.76
PRK15402406 multidrug efflux system translocase MdfA; Provisio 98.76
COG2223 417 NarK Nitrate/nitrite transporter [Inorganic ion tr 98.75
PRK10473392 multidrug efflux system protein MdtL; Provisional 98.75
PRK11010 491 ampG muropeptide transporter; Validated 98.74
PRK03633381 putative MFS family transporter protein; Provision 98.73
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 98.71
TIGR00883 394 2A0106 metabolite-proton symporter. This model rep 98.71
PRK03633 381 putative MFS family transporter protein; Provision 98.7
PRK11043401 putative transporter; Provisional 98.7
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 98.69
PRK09874408 drug efflux system protein MdtG; Provisional 98.69
KOG1330 493 consensus Sugar transporter/spinster transmembrane 98.68
PRK09528 420 lacY galactoside permease; Reviewed 98.68
TIGR00896 355 CynX cyanate transporter. This family of proteins 98.67
PRK15011 393 sugar efflux transporter B; Provisional 98.67
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 98.66
KOG0254 513 consensus Predicted transporter (major facilitator 98.65
PRK12382392 putative transporter; Provisional 98.64
COG2270438 Permeases of the major facilitator superfamily [Ge 98.63
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 98.63
TIGR00805 633 oat sodium-independent organic anion transporter. 98.63
PRK10133 438 L-fucose transporter; Provisional 98.63
PRK03699394 putative transporter; Provisional 98.62
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 98.62
TIGR00900365 2A0121 H+ Antiporter protein. 98.62
TIGR00882 396 2A0105 oligosaccharide:H+ symporter. 98.6
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 98.59
PRK11195393 lysophospholipid transporter LplT; Provisional 98.58
PRK10091382 MFS transport protein AraJ; Provisional 98.57
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 98.57
TIGR00902382 2A0127 phenyl proprionate permease family protein. 98.56
KOG2532 466 consensus Permease of the major facilitator superf 98.55
TIGR02718 390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 98.54
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 98.51
TIGR00792 437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 98.49
PRK14995495 methyl viologen resistance protein SmvA; Provision 98.46
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 98.46
KOG3764 464 consensus Vesicular amine transporter [Intracellul 98.41
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 98.4
PRK09669 444 putative symporter YagG; Provisional 98.4
PRK09848448 glucuronide transporter; Provisional 98.4
PF13347428 MFS_2: MFS/sugar transport protein 98.4
KOG0252 538 consensus Inorganic phosphate transporter [Inorgan 98.39
PF00083 451 Sugar_tr: Sugar (and other) transporter; InterPro: 98.38
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 98.34
PRK11128 382 putative 3-phenylpropionic acid transporter; Provi 98.33
TIGR00896355 CynX cyanate transporter. This family of proteins 98.33
KOG2504 509 consensus Monocarboxylate transporter [Carbohydrat 98.32
PRK10213394 nepI ribonucleoside transporter; Reviewed 98.3
TIGR00902 382 2A0127 phenyl proprionate permease family protein. 98.3
PRK11652394 emrD multidrug resistance protein D; Provisional 98.26
PRK10429473 melibiose:sodium symporter; Provisional 98.25
PRK11646400 multidrug resistance protein MdtH; Provisional 98.24
PRK11462 460 putative transporter; Provisional 98.21
PF13347 428 MFS_2: MFS/sugar transport protein 98.2
PRK09669444 putative symporter YagG; Provisional 98.19
PRK10054395 putative transporter; Provisional 98.18
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 98.17
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 98.15
COG3104 498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 98.14
KOG2532466 consensus Permease of the major facilitator superf 98.12
PRK10429 473 melibiose:sodium symporter; Provisional 98.12
PRK10133438 L-fucose transporter; Provisional 98.11
TIGR01272310 gluP glucose/galactose transporter. Disruption of 98.11
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.1
PRK15403413 multidrug efflux system protein MdtM; Provisional 98.09
COG2211467 MelB Na+/melibiose symporter and related transport 98.07
PF11700 477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 98.07
KOG2533 495 consensus Permease of the major facilitator superf 98.07
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 98.02
TIGR00788468 fbt folate/biopterin transporter. The only functio 98.02
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 98.0
PRK11462460 putative transporter; Provisional 97.99
KOG0253 528 consensus Synaptic vesicle transporter SV2 (major 97.95
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 97.92
PRK09848 448 glucuronide transporter; Provisional 97.88
KOG2816 463 consensus Predicted transporter ADD1 (major facili 97.86
COG2211 467 MelB Na+/melibiose symporter and related transport 97.78
COG0738422 FucP Fucose permease [Carbohydrate transport and m 97.71
KOG2563 480 consensus Permease of the major facilitator superf 97.69
TIGR00889 418 2A0110 nucleoside transporter. This family of prot 97.67
COG0738 422 FucP Fucose permease [Carbohydrate transport and m 97.67
PF1283277 MFS_1_like: MFS_1 like family 97.64
PF03825 400 Nuc_H_symport: Nucleoside H+ symporter 97.53
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 97.53
COG2807395 CynX Cyanate permease [Inorganic ion transport and 97.5
TIGR00788 468 fbt folate/biopterin transporter. The only functio 97.5
PF06609599 TRI12: Fungal trichothecene efflux pump (TRI12); I 97.47
PF01306 412 LacY_symp: LacY proton/sugar symporter; InterPro: 97.07
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 97.02
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 97.02
KOG1330493 consensus Sugar transporter/spinster transmembrane 97.0
PRK10207489 dipeptide/tripeptide permease B; Provisional 96.84
KOG2563480 consensus Permease of the major facilitator superf 96.74
PF03092 433 BT1: BT1 family; InterPro: IPR004324 Members of th 96.58
TIGR00805633 oat sodium-independent organic anion transporter. 96.58
PF03209 403 PUCC: PUCC protein; InterPro: IPR004896 This prote 96.16
KOG2325 488 consensus Predicted transporter/transmembrane prot 96.06
PRK09584500 tppB putative tripeptide transporter permease; Rev 96.06
COG0477 338 ProP Permeases of the major facilitator superfamil 95.43
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 95.32
TIGR00769 472 AAA ADP/ATP carrier protein family. These proteins 95.2
PRK15462493 dipeptide/tripeptide permease D; Provisional 95.18
KOG2615451 consensus Permease of the major facilitator superf 94.95
COG2807 395 CynX Cyanate permease [Inorganic ion transport and 94.87
KOG3762618 consensus Predicted transporter [General function 94.72
KOG3098461 consensus Uncharacterized conserved protein [Funct 94.5
PTZ00207591 hypothetical protein; Provisional 94.48
KOG3626 735 consensus Organic anion transporter [Secondary met 94.38
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 94.34
COG2270 438 Permeases of the major facilitator superfamily [Ge 94.32
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 94.12
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 94.04
KOG0637 498 consensus Sucrose transporter and related proteins 92.31
PF01770 412 Folate_carrier: Reduced folate carrier; InterPro: 92.24
PF03219 491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 91.79
KOG3762 618 consensus Predicted transporter [General function 91.77
KOG1237 571 consensus H+/oligopeptide symporter [Amino acid tr 90.75
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 90.58
TIGR00939 437 2a57 Equilibrative Nucleoside Transporter (ENT). 86.03
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 85.28
KOG3098 461 consensus Uncharacterized conserved protein [Funct 84.63
KOG1479 406 consensus Nucleoside transporter [Nucleotide trans 84.0
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 83.52
KOG2816463 consensus Predicted transporter ADD1 (major facili 83.32
PRK03612 521 spermidine synthase; Provisional 82.67
TIGR01272 310 gluP glucose/galactose transporter. Disruption of 82.5
KOG3764464 consensus Vesicular amine transporter [Intracellul 82.47
KOG4686 459 consensus Predicted sugar transporter [Carbohydrat 82.0
PF11947153 DUF3464: Protein of unknown function (DUF3464); In 80.41
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1e-41  Score=300.67  Aligned_cols=284  Identities=31%  Similarity=0.574  Sum_probs=241.8

Q ss_pred             cccchHHHHHHHHHhccCCCChHHHHh-cCCHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHH-hccccchhhhhcchh
Q 021808            2 LGVSAVPAIIQFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELR-KKKTVRYLDVFKSKE   79 (307)
Q Consensus         2 ~~i~~~p~~~~~~~~~~~pESp~wL~~-~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   79 (307)
                      +++..+|+++.++..+++|||||||+. |||++||++.++++++..+.+++.+++.+..++++. ++++.+.+++++++.
T Consensus       187 ~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~  266 (485)
T KOG0569|consen  187 LAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPT  266 (485)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcc
Confidence            456789999999999999999999998 899999999999999988777766665444333332 235667999999999


Q ss_pred             HHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHH
Q 021808           80 IRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGV  159 (307)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~  159 (307)
                      +|+.+.+++++.+.+++.|.+.+.+|...++.+.|.+.. .+.+.+...+.+.++.++++.+++||+|||++++.+..++
T Consensus       267 lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~-~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~  345 (485)
T KOG0569|consen  267 LRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPE-EAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLM  345 (485)
T ss_pred             hhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence            999999999999999999999999999999999998665 4678888888899999999999999999999999998888


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHh
Q 021808          160 IISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT  239 (307)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~  239 (307)
                      .++.+.+.......+...  .+..+..+.+.+++...++.|++|++|.+.+|+||++.|+.+.+++...+|.++++....
T Consensus       346 ~~~~~~~~~~~~l~~~~~--~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~  423 (485)
T KOG0569|consen  346 AVALLLMSIALFLSNSFG--SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFA  423 (485)
T ss_pred             HHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHH
Confidence            887777654443322211  223344567777888899999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHhhc
Q 021808          240 FLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKER  289 (307)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~e~~~~~~~~  289 (307)
                      ++.+....|. ..|+++.+.+.+..++.++.+||||||+.+|+.+.++++
T Consensus       424 fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~  472 (485)
T KOG0569|consen  424 FPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR  472 (485)
T ss_pred             HHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence            9998888875 677888888888888899999999999999999999876

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query307
4gby_A491 The Structure Of The Mfs (Major Facilitator Superfa 4e-18
>pdb|4GBY|A Chain A, The Structure Of The Mfs (Major Facilitator Superfamily) Proton:xylose Symporter Xyle Bound To D-Xylose Length = 491 Back     alignment and structure 
Iteration: 1

 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 124/298 (41%), Gaps = 31/298 (10%)
Query: 1   MLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAE 60
           M     +PA++  +L+  +PESPRWL  +  +E+A  +L KI          + L+  A 
Sbjct: 202 MFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMG--------NTLATQAV 253
Query: 61  EELRK-----KKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGF 115
           +E++      +KT   L +F    I                  IN V+YY+P + +  G 
Sbjct: 254 QEIKHSLDHGRKTGGRLLMFGVGVI----VIGVMLSIFQQFVGINVVLYYAPEVFKTLG- 308
Query: 116 QSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXX 175
            S              N   T++ I  +D FGRK L +    G+ I +  L  AF     
Sbjct: 309 ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAP 368
Query: 176 XXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLI 235
                  G +A++ +  Y+A FA   GPV W L SE++P   RG    ++    W++N  
Sbjct: 369 -------GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYF 421
Query: 236 VAQTFLTVAE---LVG---TGATXXXXXXXXXXXXXXXXXXXPETQGLTFLEVEQMWK 287
           V+ TF  + +   LV     G +                   PET+G T  E+E +W+
Sbjct: 422 VSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE 479
  Database: pdbaa

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query307
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 2e-10
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451 Back     alignment and structure
 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 40/269 (14%), Positives = 99/269 (36%), Gaps = 27/269 (10%)

Query: 7   VPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKK 66
           +PA    ++ LF      +  M+   +   L       I   +++         E+    
Sbjct: 191 MPAFCAILVALFA-----FAMMRDTPQSCGLP-----PIEEYKNDYPDDYNEKAEQELTA 240

Query: 67  KTVRYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPT-IVQMAGFQSNQLALLLS 125
           K +    V  +K +    +A      F        ++ +SPT + ++  F  ++ +    
Sbjct: 241 KQIFMQYVLPNKLLWYIAIA----NVFVYLL-RYGILDWSPTYLKEVKHFALDKSSWAYF 295

Query: 126 L-AVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGW 184
           L   AG    GT++  ++ D   R     + +  + +  +     +++ +          
Sbjct: 296 LYEYAGI--PGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAG------NPT 347

Query: 185 IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFL-TV 243
           + +I + + I F   G   +      E+ P++  G   G +    ++   + A   +   
Sbjct: 348 VDMICMIV-IGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYT 406

Query: 244 AELVGTGATFLILAGIAVLAVVFVILFVP 272
            +  G    F+++ G ++LAV+ +I+ + 
Sbjct: 407 VDFFGWDGGFMVMIGGSILAVILLIVVMI 435

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query307
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 100.0
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.46
1pw4_A 451 Glycerol-3-phosphate transporter; transmembrane, i 99.32
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 99.29
2cfq_A417 Lactose permease; transport, transport mechanism, 99.27
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 99.25
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 99.18
4aps_A 491 DI-OR tripeptide H+ symporter; transport protein, 99.13
2xut_A 524 Proton/peptide symporter family protein; transport 99.09
4gc0_A 491 D-xylose-proton symporter; MFS, transport protein; 99.05
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.02
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 98.37
2cfq_A 417 Lactose permease; transport, transport mechanism, 98.18
2xut_A524 Proton/peptide symporter family protein; transport 97.92
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
Probab=100.00  E-value=3.2e-34  Score=260.37  Aligned_cols=273  Identities=32%  Similarity=0.579  Sum_probs=197.0

Q ss_pred             ccchHHHHHHHHHhccCCCChHHHHhcCCHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHhccccchhhhhcchhHHH
Q 021808            3 GVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRL   82 (307)
Q Consensus         3 ~i~~~p~~~~~~~~~~~pESp~wL~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (307)
                      .++.+|+++.++.++++|||||||..|++.||+.+.+++.+..+..+++..+.++..++++   +.......++.+.   
T Consensus       204 ~~~~~~~~~~~~~~~~~peSp~~L~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---  277 (491)
T 4gc0_A          204 ASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGR---KTGGRLLMFGVGV---  277 (491)
T ss_dssp             HTTHHHHHHHHHHGGGSCCCHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHTTHHHHSCCTH---
T ss_pred             hhhhhhhhhhhhhhhcCCCChHHHHHcCchhHHHHhHHHhcCCchhHHHHHHHHHHHHhhh---hhhhHHHHhcccH---
Confidence            4567888888899999999999999999999999999887655443333322222111111   1112222333222   


Q ss_pred             HHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHH
Q 021808           83 AFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIIS  162 (307)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~  162 (307)
                       .........++++.+++.+.+|.+.+.+..+.+..+ ....+....+..+++.+++++++||+|||+.++.+...+.++
T Consensus       278 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~  355 (491)
T 4gc0_A          278 -IVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDI-ALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIG  355 (491)
T ss_dssp             -HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSSCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHhhhhHHHhcchHHHHhcCCCccc-hhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHH
Confidence             233344556677888889999999999888876544 445566666778899999999999999999998887777777


Q ss_pred             HHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHH
Q 021808          163 LVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLT  242 (307)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~  242 (307)
                      .+.+.........       ....+....++...+..+.+++.+.+.+|+||+++|+++.|++...+++++++++..++.
T Consensus       356 ~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~  428 (491)
T 4gc0_A          356 MFSLGTAFYTQAP-------GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPM  428 (491)
T ss_dssp             HHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHhcccc-------hHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6665544332211       233444555556677778888999999999999999999999999999999988777665


Q ss_pred             HHH------HhCCchhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHhhcc
Q 021808          243 VAE------LVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKERA  290 (307)
Q Consensus       243 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~e~~~~~~~~~  290 (307)
                      +..      ..+....+++++++++++.+++++++||||||++||+|+.||++.
T Consensus       429 l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~PETkg~tLeei~~~f~~~~  482 (491)
T 4gc0_A          429 MDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWEPET  482 (491)
T ss_dssp             HCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHCCCCTTCCHHHHGGGTC---
T ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHheecCCCCCCHHHHHHHhCCCC
Confidence            422      233445677888888888888889999999999999999998655
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query307
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.47
d1pw4a_ 447 Glycerol-3-phosphate transporter {Escherichia coli 99.32
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.23
d1pv7a_ 417 Lactose permease {Escherichia coli [TaxId: 562]} 98.75
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.47  E-value=5.3e-14  Score=123.01  Aligned_cols=165  Identities=13%  Similarity=0.197  Sum_probs=90.7

Q ss_pred             hhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCC
Q 021808          100 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS  179 (307)
Q Consensus       100 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (307)
                      +....+.+.++.+....+............+..+++.+++++++||++||+..........+....... .......   
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---  341 (447)
T d1pw4a_         266 YGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIV-YWMNPAG---  341 (447)
T ss_dssp             HHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHH-TTSCCTT---
T ss_pred             hcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhccccccccccchhHHHHHHHHHH-HHhcccc---
Confidence            344456666665543334333444555556667899999999999999987554333322222222111 1111110   


Q ss_pred             CchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHH-HHHHHhhHHHHHHhCCchhHHHHHH
Q 021808          180 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISN-LIVAQTFLTVAELVGTGATFLILAG  258 (307)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  258 (307)
                        ..+...+...+ .++...+..+..+.+..|.+|++.|+++.|+....+++++ +.++.......+..+....+.++++
T Consensus       342 --~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~  418 (447)
T d1pw4a_         342 --NPTVDMICMIV-IGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIG  418 (447)
T ss_dssp             --CHHHHHHHHHH-HHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHH
T ss_pred             --cHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence              11222222222 2233334455666788999999999999999887777644 4444444444555555445555555


Q ss_pred             HHHHHHHHHHhhc
Q 021808          259 IAVLAVVFVILFV  271 (307)
Q Consensus       259 ~~~~~~~~~~~~l  271 (307)
                      +.+++.++..++.
T Consensus       419 ~~~~~~~~~~~~~  431 (447)
T d1pw4a_         419 GSILAVILLIVVM  431 (447)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            5555555444433
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure