Citrus Sinensis ID: 021917

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-----
MAGGSDAAETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKAKLSAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVEIKQLV
ccccccccccccccccccccccccccccccccccccccccEEcHHHHcccHHHHHHHHHHccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccEEEcccccccccccccEEEEEEEEEEcccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccEEEEEcc
cccccccccccccccccccccccccccHHHHccccccccEEccHHHHHHHHHHHHHHHHHcccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEHHHHHHHHHHHHHHcccccccccHHHcccccEEEEccEEEcccccccEcccccEEEEEEEEEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccccEHHHHHHHHHHHHHHcccEEEEcccc
maggsdaaettslscvrcgkpahlqcpkcmelklpregaafctqdcfkaswtshksVHLKAklsapgtgensslvSEGWRYCIkkgqartpklphfdwtgtlrpypisskltvpayielpdwaldgtpkvepnsdlqhvveiktPDQIERMRETCRIAREVLDAAARmirpgvttdeIDRVVHEAtitaggypsplnyhffpkscctsvnevichgipdsrkledgdivnIDVTVYYkgvhgdlnetyfvgnadEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVEIKQLV
maggsdaaettslscvrcgkPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKaklsapgtgensslvSEGWRYCIKKGqartpklphfdwtGTLRPYPISSKLTVPAYIELPDWALDGTpkvepnsdlqhvveiktpdqieRMRETCRIAREVLdaaarmirpgvttdeidrVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIpdsrkledgdiVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAisivkpgvrFREIGEVinrhatmsgfsveikqlv
MAGGSDAAETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKAKLSAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVEIKQLV
************LSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKA************LVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKV*****LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFS*******
********************PAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVH**********************YCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTP**************KTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVEIKQLV
************LSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASW************************SEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVEIKQLV
************LSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKAK****************WRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEP**DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVEIKQLV
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MAGGSDAAETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKAKLSAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVEIKQLV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query305 2.2.26 [Sep-21-2011]
Q9SLN5398 Methionine aminopeptidase yes no 0.977 0.748 0.819 1e-148
Q5ZIM5385 Methionine aminopeptidase yes no 0.924 0.732 0.513 5e-78
A6QLA4386 Methionine aminopeptidase yes no 0.924 0.730 0.510 2e-77
Q4QRK0386 Methionine aminopeptidase yes no 0.921 0.727 0.496 2e-77
P53582386 Methionine aminopeptidase yes no 0.924 0.730 0.516 2e-77
Q5RBF3386 Methionine aminopeptidase yes no 0.924 0.730 0.516 3e-77
Q7ZWV9385 Methionine aminopeptidase N/A no 0.888 0.703 0.508 1e-76
Q8BP48386 Methionine aminopeptidase yes no 0.924 0.730 0.510 2e-76
Q5I0A0385 Methionine aminopeptidase yes no 0.888 0.703 0.508 1e-75
Q54WU3367 Methionine aminopeptidase yes no 0.845 0.702 0.480 3e-72
>sp|Q9SLN5|AMP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=2 SV=1 Back     alignment and function desciption
 Score =  525 bits (1352), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 245/299 (81%), Positives = 274/299 (91%), Gaps = 1/299 (0%)

Query: 1   MAGGSDAAETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLK 60
           MA  SDA+   +LSC RC KPAHLQCPKC++LKLPRE A+FCTQ+CFKA+W+SHKSVH+K
Sbjct: 1   MASESDASSIATLSCARCEKPAHLQCPKCIDLKLPREQASFCTQECFKAAWSSHKSVHVK 60

Query: 61  AKLSAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELP 120
           A+LS+ G  +NS L+S+GW YC+KKGQARTPKLPHFDWTG L+ YPIS+K  VPA IE P
Sbjct: 61  AQLSSIG-DQNSDLISQGWLYCVKKGQARTPKLPHFDWTGPLKQYPISTKRVVPAEIEKP 119

Query: 121 DWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDR 180
           DWA+DGTPKVEPNSDLQHVVEIKTP+QI+RMRETC+IAREVLDAAAR+I PGVTTDEIDR
Sbjct: 120 DWAIDGTPKVEPNSDLQHVVEIKTPEQIQRMRETCKIAREVLDAAARVIHPGVTTDEIDR 179

Query: 181 VVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGV 240
           VVHEATI AGGYPSPLNY+FFPKSCCTSVNEVICHGIPD+RKLEDGDIVN+DVTV YKG 
Sbjct: 180 VVHEATIAAGGYPSPLNYYFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVCYKGC 239

Query: 241 HGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSV 299
           HGDLNETYFVGN DEASRQLV+CTYECLEKAI+IVKPGVRFREIGE++NRHATMSG SV
Sbjct: 240 HGDLNETYFVGNVDEASRQLVKCTYECLEKAIAIVKPGVRFREIGEIVNRHATMSGLSV 298
Removes the N-terminal methionine from nascent proteins.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 8
>sp|Q5ZIM5|AMPM1_CHICK Methionine aminopeptidase 1 OS=Gallus gallus GN=METAP1 PE=2 SV=1 Back     alignment and function description
>sp|A6QLA4|AMPM1_BOVIN Methionine aminopeptidase 1 OS=Bos taurus GN=METAP1 PE=2 SV=1 Back     alignment and function description
>sp|Q4QRK0|AMPM1_DANRE Methionine aminopeptidase 1 OS=Danio rerio GN=metap1 PE=2 SV=2 Back     alignment and function description
>sp|P53582|AMPM1_HUMAN Methionine aminopeptidase 1 OS=Homo sapiens GN=METAP1 PE=1 SV=2 Back     alignment and function description
>sp|Q5RBF3|AMPM1_PONAB Methionine aminopeptidase 1 OS=Pongo abelii GN=METAP1 PE=2 SV=1 Back     alignment and function description
>sp|Q7ZWV9|AMPM1_XENLA Methionine aminopeptidase 1 OS=Xenopus laevis GN=metap1 PE=2 SV=2 Back     alignment and function description
>sp|Q8BP48|AMPM1_MOUSE Methionine aminopeptidase 1 OS=Mus musculus GN=Metap1 PE=2 SV=1 Back     alignment and function description
>sp|Q5I0A0|AMPM1_XENTR Methionine aminopeptidase 1 OS=Xenopus tropicalis GN=metap1 PE=2 SV=1 Back     alignment and function description
>sp|Q54WU3|AMPM1_DICDI Methionine aminopeptidase 1 OS=Dictyostelium discoideum GN=metap1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query305
255541234397 methionine aminopeptidase, putative [Ric 0.973 0.748 0.842 1e-151
356496352397 PREDICTED: methionine aminopeptidase 1A- 0.973 0.748 0.846 1e-149
356506316397 PREDICTED: methionine aminopeptidase 1A- 0.973 0.748 0.849 1e-149
225453987398 PREDICTED: methionine aminopeptidase 1A 0.957 0.733 0.858 1e-149
449432281402 PREDICTED: methionine aminopeptidase 1A- 0.980 0.743 0.815 1e-148
15225437398 methionine aminopeptidase 1A [Arabidopsi 0.977 0.748 0.819 1e-146
297824569401 hypothetical protein ARALYDRAFT_903964 [ 0.980 0.745 0.823 1e-146
21593270398 putative methionine aminopeptidase [Arab 0.977 0.748 0.819 1e-146
224127342396 predicted protein [Populus trichocarpa] 0.963 0.742 0.830 1e-146
388498902397 unknown [Medicago truncatula] 0.973 0.748 0.812 1e-143
>gi|255541234|ref|XP_002511681.1| methionine aminopeptidase, putative [Ricinus communis] gi|223548861|gb|EEF50350.1| methionine aminopeptidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 252/299 (84%), Positives = 278/299 (92%), Gaps = 2/299 (0%)

Query: 1   MAGGSDAAETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLK 60
           MAGGS+AAE T L C RC KPAHLQCPKCMELKLPREGAAFCTQDCFKASW++HKSVH+K
Sbjct: 1   MAGGSEAAEATPLLCARCEKPAHLQCPKCMELKLPREGAAFCTQDCFKASWSTHKSVHVK 60

Query: 61  AKLSAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELP 120
           AKLS+    +NS L +EGWRYC+++GQ RTPKLP+FDWTGTLRPYPIS    VPA+I+ P
Sbjct: 61  AKLSS--IEQNSDLSNEGWRYCLRRGQDRTPKLPYFDWTGTLRPYPISPYRVVPAHIDKP 118

Query: 121 DWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDR 180
           DWA+DG PK+EPNSDLQHVVEIKT DQI+RMRETCRI+REVLDAAAR+IRPG+TTDE+DR
Sbjct: 119 DWAVDGIPKIEPNSDLQHVVEIKTTDQIQRMRETCRISREVLDAAARVIRPGITTDEVDR 178

Query: 181 VVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGV 240
           VVHEATI+AGGYPSPLNYHFFPKSCCTSVNEVICHGIPD+RKLEDGDIVN+DV+VYYKGV
Sbjct: 179 VVHEATISAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVSVYYKGV 238

Query: 241 HGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSV 299
           HGDLNET+FVGN DEASRQLVQCTYECLEKAISIVKPGVRFRE+GEVINRHATMSG SV
Sbjct: 239 HGDLNETFFVGNVDEASRQLVQCTYECLEKAISIVKPGVRFREVGEVINRHATMSGLSV 297

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356496352|ref|XP_003517032.1| PREDICTED: methionine aminopeptidase 1A-like [Glycine max] Back     alignment and taxonomy information
>gi|356506316|ref|XP_003521931.1| PREDICTED: methionine aminopeptidase 1A-like [Glycine max] Back     alignment and taxonomy information
>gi|225453987|ref|XP_002274528.1| PREDICTED: methionine aminopeptidase 1A [Vitis vinifera] gi|296089187|emb|CBI38890.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449432281|ref|XP_004133928.1| PREDICTED: methionine aminopeptidase 1A-like [Cucumis sativus] gi|449528877|ref|XP_004171428.1| PREDICTED: methionine aminopeptidase 1A-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|15225437|ref|NP_182049.1| methionine aminopeptidase 1A [Arabidopsis thaliana] gi|12229672|sp|Q9SLN5.1|AMP1A_ARATH RecName: Full=Methionine aminopeptidase 1A; Short=MAP 1A; Short=MetAP 1A; AltName: Full=Peptidase M 1A gi|11320954|gb|AAG33974.1|AF250960_1 methionine aminopeptidase-like protein [Arabidopsis thaliana] gi|2583129|gb|AAB82638.1| putative methionine aminopeptidase [Arabidopsis thaliana] gi|20466153|gb|AAM20394.1| putative methionine aminopeptidase [Arabidopsis thaliana] gi|30725654|gb|AAP37849.1| At2g45240 [Arabidopsis thaliana] gi|110742696|dbj|BAE99259.1| putative methionine aminopeptidase [Arabidopsis thaliana] gi|330255434|gb|AEC10528.1| methionine aminopeptidase 1A [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297824569|ref|XP_002880167.1| hypothetical protein ARALYDRAFT_903964 [Arabidopsis lyrata subsp. lyrata] gi|297326006|gb|EFH56426.1| hypothetical protein ARALYDRAFT_903964 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|21593270|gb|AAM65219.1| putative methionine aminopeptidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224127342|ref|XP_002320050.1| predicted protein [Populus trichocarpa] gi|222860823|gb|EEE98365.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|388498902|gb|AFK37517.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query305
TAIR|locus:2050916398 MAP1A "methionine aminopeptida 0.977 0.748 0.819 1.5e-138
UNIPROTKB|Q5ZIM5385 METAP1 "Methionine aminopeptid 0.924 0.732 0.513 7.3e-75
UNIPROTKB|F1S0C0386 METAP1 "Methionine aminopeptid 0.924 0.730 0.513 1.9e-74
UNIPROTKB|A6QLA4386 METAP1 "Methionine aminopeptid 0.924 0.730 0.510 4e-74
UNIPROTKB|P53582386 METAP1 "Methionine aminopeptid 0.924 0.730 0.510 4e-74
ZFIN|ZDB-GENE-050626-124405 metap1 "methionyl aminopeptida 0.921 0.693 0.5 4e-74
UNIPROTKB|F1NI90379 METAP1 "Methionine aminopeptid 0.888 0.715 0.519 1.4e-73
MGI|MGI:1922874386 Metap1 "methionyl aminopeptida 0.924 0.730 0.510 2.8e-73
RGD|1305545386 Metap1 "methionyl aminopeptida 0.924 0.730 0.506 3.6e-73
WB|WBGene00003129371 map-1 [Caenorhabditis elegans 0.675 0.555 0.564 8.6e-73
TAIR|locus:2050916 MAP1A "methionine aminopeptidase 1A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1356 (482.4 bits), Expect = 1.5e-138, P = 1.5e-138
 Identities = 245/299 (81%), Positives = 274/299 (91%)

Query:     1 MAGGSDAAETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLK 60
             MA  SDA+   +LSC RC KPAHLQCPKC++LKLPRE A+FCTQ+CFKA+W+SHKSVH+K
Sbjct:     1 MASESDASSIATLSCARCEKPAHLQCPKCIDLKLPREQASFCTQECFKAAWSSHKSVHVK 60

Query:    61 AKLSAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELP 120
             A+LS+ G  +NS L+S+GW YC+KKGQARTPKLPHFDWTG L+ YPIS+K  VPA IE P
Sbjct:    61 AQLSSIGD-QNSDLISQGWLYCVKKGQARTPKLPHFDWTGPLKQYPISTKRVVPAEIEKP 119

Query:   121 DWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDR 180
             DWA+DGTPKVEPNSDLQHVVEIKTP+QI+RMRETC+IAREVLDAAAR+I PGVTTDEIDR
Sbjct:   120 DWAIDGTPKVEPNSDLQHVVEIKTPEQIQRMRETCKIAREVLDAAARVIHPGVTTDEIDR 179

Query:   181 VVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGV 240
             VVHEATI AGGYPSPLNY+FFPKSCCTSVNEVICHGIPD+RKLEDGDIVN+DVTV YKG 
Sbjct:   180 VVHEATIAAGGYPSPLNYYFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVCYKGC 239

Query:   241 HGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSV 299
             HGDLNETYFVGN DEASRQLV+CTYECLEKAI+IVKPGVRFREIGE++NRHATMSG SV
Sbjct:   240 HGDLNETYFVGNVDEASRQLVKCTYECLEKAIAIVKPGVRFREIGEIVNRHATMSGLSV 298
GO:0004177 "aminopeptidase activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM;IDA
GO:0006508 "proteolysis" evidence=IEA
GO:0008235 "metalloexopeptidase activity" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0009987 "cellular process" evidence=IEA
GO:0016485 "protein processing" evidence=NAS
GO:0031365 "N-terminal protein amino acid modification" evidence=TAS
GO:0005829 "cytosol" evidence=IDA
GO:0010048 "vernalization response" evidence=RCA
GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA
GO:0048440 "carpel development" evidence=RCA
UNIPROTKB|Q5ZIM5 METAP1 "Methionine aminopeptidase 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1S0C0 METAP1 "Methionine aminopeptidase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|A6QLA4 METAP1 "Methionine aminopeptidase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P53582 METAP1 "Methionine aminopeptidase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050626-124 metap1 "methionyl aminopeptidase 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NI90 METAP1 "Methionine aminopeptidase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1922874 Metap1 "methionyl aminopeptidase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1305545 Metap1 "methionyl aminopeptidase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
WB|WBGene00003129 map-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5ZIM5AMPM1_CHICK3, ., 4, ., 1, 1, ., 1, 80.51350.92450.7324yesno
Q9SLN5AMP1A_ARATH3, ., 4, ., 1, 1, ., 1, 80.81930.97700.7487yesno
P53582AMPM1_HUMAN3, ., 4, ., 1, 1, ., 1, 80.51680.92450.7305yesno
Q8BP48AMPM1_MOUSE3, ., 4, ., 1, 1, ., 1, 80.51010.92450.7305yesno
A6QLA4AMPM1_BOVIN3, ., 4, ., 1, 1, ., 1, 80.51010.92450.7305yesno
Q5I0A0AMPM1_XENTR3, ., 4, ., 1, 1, ., 1, 80.50870.88850.7038yesno
Q5RBF3AMPM1_PONAB3, ., 4, ., 1, 1, ., 1, 80.51680.92450.7305yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.11.180.991
3rd Layer3.4.110.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
MAP1A
MAP1A (METHIONINE AMINOPEPTIDASE 1A); aminopeptidase/ metalloexopeptidase; Encodes a cytoplasmic MAP1 like methionine aminopeptidase which is involved in removing the N-terminal methionine from proteins. Induced mutants using RNAi technology which knocks out both MAP1 and MAP2 like genes show abnormal development. ; Removes the amino-terminal methionine from nascent proteins (By similarity) (398 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
SCY1
SCY1 (SecY Homolog 1); P-P-bond-hydrolysis-driven protein transmembrane transporter; SecY Homol [...] (551 aa)
•  •  • 0.896
AT1G48350
ribosomal protein L18 family protein; ribosomal protein L18 family protein; FUNCTIONS IN- struc [...] (170 aa)
•  •  • 0.886
MAP2A
MAP2A (METHIONINE AMINOPEPTIDASE 2A); aminopeptidase/ metalloexopeptidase; Encodes a MAP2 like [...] (441 aa)
    • • 0.870
RPS8
unknown protein; chloroplast 30S ribosomal protein S8 ; One of the primary rRNA binding protein [...] (134 aa)
•  •  • 0.869
AT4G01310
ribosomal protein L5 family protein; ribosomal protein L5 family protein; FUNCTIONS IN- structu [...] (262 aa)
•  •  • 0.840
emb2394
emb2394 (embryo defective 2394); structural constituent of ribosome; embryo defective 2394 (emb [...] (223 aa)
•  •  • 0.829
AT4G11175
translation initiation factor IF-1, chloroplast, putative; translation initiation factor IF-1, [...] (141 aa)
•  •  • 0.820
ATCG00380.1-P
unknown protein; Chloroplast encoded ribosomal protein S4 ; One of the primary rRNA binding pro [...] (201 aa)
•  •  • 0.819
ATCG00800.1-P
unknown protein; encodes a chloroplast ribosomal protein S3, a constituent of the small subunit [...] (218 aa)
•  •  • 0.819
RPOA
unknown protein; RNA polymerase alpha subunit ; DNA-dependent RNA polymerase catalyzes the tran [...] (329 aa)
•  •  • 0.812

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query305
PLN03158396 PLN03158, PLN03158, methionine aminopeptidase; Pro 0.0
cd01086238 cd01086, MetAP1, Methionine Aminopeptidase 1 2e-85
PRK05716252 PRK05716, PRK05716, methionine aminopeptidase; Val 8e-80
COG0024255 COG0024, Map, Methionine aminopeptidase [Translati 2e-71
PRK12896255 PRK12896, PRK12896, methionine aminopeptidase; Rev 4e-66
TIGR00500247 TIGR00500, met_pdase_I, methionine aminopeptidase, 2e-65
PRK12318291 PRK12318, PRK12318, methionine aminopeptidase; Pro 1e-49
pfam00557208 pfam00557, Peptidase_M24, Metallopeptidase family 1e-46
cd01066207 cd01066, APP_MetAP, A family including aminopeptid 1e-35
COG0006384 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid 3e-29
PRK12897248 PRK12897, PRK12897, methionine aminopeptidase; Rev 1e-23
PRK08671 291 PRK08671, PRK08671, methionine aminopeptidase; Pro 3e-23
cd01092208 cd01092, APP-like, Similar to Prolidase and Aminop 2e-22
cd01088 291 cd01088, MetAP2, Methionine Aminopeptidase 2 4e-17
TIGR00501 295 TIGR00501, met_pdase_II, methionine aminopeptidase 2e-16
PRK09795361 PRK09795, PRK09795, aminopeptidase; Provisional 6e-11
PRK10879 438 PRK10879, PRK10879, proline aminopeptidase P II; P 2e-10
PRK14575406 PRK14575, PRK14575, putative peptidase; Provisiona 5e-10
PRK15173323 PRK15173, PRK15173, peptidase; Provisional 5e-10
PRK14576405 PRK14576, PRK14576, putative endopeptidase; Provis 2e-09
PRK07281286 PRK07281, PRK07281, methionine aminopeptidase; Rev 3e-09
cd01087243 cd01087, Prolidase, Prolidase 6e-09
TIGR00495 389 TIGR00495, crvDNA_42K, 42K curved DNA binding prot 4e-07
PLN03144 606 PLN03144, PLN03144, Carbon catabolite repressor pr 1e-06
cd01089228 cd01089, PA2G4-like, Related to aminopepdidase M, 5e-06
PTZ00053 470 PTZ00053, PTZ00053, methionine aminopeptidase 2; P 5e-04
COG0006384 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid 6e-04
cd01090228 cd01090, Creatinase, Creatine amidinohydrolase 0.001
>gnl|CDD|215607 PLN03158, PLN03158, methionine aminopeptidase; Provisional Back     alignment and domain information 
 Score =  585 bits (1510), Expect = 0.0
 Identities = 241/296 (81%), Positives = 266/296 (89%), Gaps = 2/296 (0%)

Query: 4   GSDAAETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKAKL 63
             +A  T+ L+C RC KPAHLQCPKC+ELKLPREGA+FC+QDCFKA+W+SHKSVH KAKL
Sbjct: 1   MEEALTTSPLACARCSKPAHLQCPKCLELKLPREGASFCSQDCFKAAWSSHKSVHTKAKL 60

Query: 64  SAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWA 123
           S+   G+NS   +EGW YC+KKGQART KLP FDWTG LRPYPIS +  VP +I  PDWA
Sbjct: 61  SS--IGQNSDAPAEGWLYCLKKGQARTSKLPDFDWTGPLRPYPISPRRVVPDHIPKPDWA 118

Query: 124 LDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVH 183
           LDGTPK+EPNSDLQH VEIKTP+QI+RMRETCRIAREVLDAAAR I+PGVTTDEIDRVVH
Sbjct: 119 LDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVH 178

Query: 184 EATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGD 243
           EATI AGGYPSPLNYHFFPKSCCTSVNEVICHGIPD+RKLEDGDIVN+DVTVYYKG HGD
Sbjct: 179 EATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGD 238

Query: 244 LNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSV 299
           LNET+FVGN DEASRQLV+CTYECLEKAI+IVKPGVR+RE+GEVINRHATMSG SV
Sbjct: 239 LNETFFVGNVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSV 294

Length = 396
>gnl|CDD|238519 cd01086, MetAP1, Methionine Aminopeptidase 1 Back     alignment and domain information
>gnl|CDD|235576 PRK05716, PRK05716, methionine aminopeptidase; Validated Back     alignment and domain information
>gnl|CDD|223103 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|237252 PRK12896, PRK12896, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|129591 TIGR00500, met_pdase_I, methionine aminopeptidase, type I Back     alignment and domain information
>gnl|CDD|183434 PRK12318, PRK12318, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 Back     alignment and domain information
>gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|171806 PRK12897, PRK12897, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|181534 PRK08671, PRK08671, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|238525 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>gnl|CDD|238521 cd01088, MetAP2, Methionine Aminopeptidase 2 Back     alignment and domain information
>gnl|CDD|129592 TIGR00501, met_pdase_II, methionine aminopeptidase, type II Back     alignment and domain information
>gnl|CDD|182080 PRK09795, PRK09795, aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|182804 PRK10879, PRK10879, proline aminopeptidase P II; Provisional Back     alignment and domain information
>gnl|CDD|173039 PRK14575, PRK14575, putative peptidase; Provisional Back     alignment and domain information
>gnl|CDD|185095 PRK15173, PRK15173, peptidase; Provisional Back     alignment and domain information
>gnl|CDD|173040 PRK14576, PRK14576, putative endopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|180918 PRK07281, PRK07281, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|238520 cd01087, Prolidase, Prolidase Back     alignment and domain information
>gnl|CDD|129586 TIGR00495, crvDNA_42K, 42K curved DNA binding protein Back     alignment and domain information
>gnl|CDD|178689 PLN03144, PLN03144, Carbon catabolite repressor protein 4 homolog; Provisional Back     alignment and domain information
>gnl|CDD|238522 cd01089, PA2G4-like, Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>gnl|CDD|240246 PTZ00053, PTZ00053, methionine aminopeptidase 2; Provisional Back     alignment and domain information
>gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|238523 cd01090, Creatinase, Creatine amidinohydrolase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 305
KOG2738369 consensus Putative methionine aminopeptidase [Post 100.0
PLN03158396 methionine aminopeptidase; Provisional 100.0
COG0024255 Map Methionine aminopeptidase [Translation, riboso 100.0
PRK12897248 methionine aminopeptidase; Reviewed 100.0
PRK07281286 methionine aminopeptidase; Reviewed 100.0
PRK12318291 methionine aminopeptidase; Provisional 100.0
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 100.0
PRK12896255 methionine aminopeptidase; Reviewed 100.0
PRK05716252 methionine aminopeptidase; Validated 100.0
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 99.97
PRK09795361 aminopeptidase; Provisional 99.97
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 99.97
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 99.97
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 99.97
TIGR00495 389 crvDNA_42K 42K curved DNA binding protein. Protein 99.97
PRK10879 438 proline aminopeptidase P II; Provisional 99.97
PRK15173323 peptidase; Provisional 99.96
PRK14575406 putative peptidase; Provisional 99.96
PRK14576405 putative endopeptidase; Provisional 99.96
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 99.96
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 99.96
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 99.96
PRK13607 443 proline dipeptidase; Provisional 99.95
TIGR00501 295 met_pdase_II methionine aminopeptidase, type II. M 99.95
PTZ00053 470 methionine aminopeptidase 2; Provisional 99.95
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 99.95
PRK08671 291 methionine aminopeptidase; Provisional 99.94
cd01066207 APP_MetAP A family including aminopeptidase P, ami 99.94
cd01088 291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 99.94
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 99.93
cd01091243 CDC68-like Related to aminopeptidase P and aminope 99.9
KOG2737 492 consensus Putative metallopeptidase [General funct 99.88
KOG2414488 consensus Putative Xaa-Pro aminopeptidase [Amino a 99.85
KOG2776 398 consensus Metallopeptidase [General function predi 99.66
KOG1189 960 consensus Global transcriptional regulator, cell d 99.41
PLN03144 606 Carbon catabolite repressor protein 4 homolog; Pro 99.39
KOG2775 397 consensus Metallopeptidase [General function predi 99.27
KOG2413 606 consensus Xaa-Pro aminopeptidase [Amino acid trans 99.06
COG5406 1001 Nucleosome binding factor SPN, SPT16 subunit [Tran 98.8
PF0175337 zf-MYND: MYND finger; InterPro: IPR002893 Zinc fin 97.87
cd01066207 APP_MetAP A family including aminopeptidase P, ami 97.62
KOG1710396 consensus MYND Zn-finger and ankyrin repeat protei 97.55
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 97.33
PRK05716252 methionine aminopeptidase; Validated 97.13
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 96.99
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 96.96
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 96.82
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 96.82
PRK15173323 peptidase; Provisional 96.81
PRK09795361 aminopeptidase; Provisional 96.73
PRK12897248 methionine aminopeptidase; Reviewed 96.73
PRK08671291 methionine aminopeptidase; Provisional 96.71
cd01091243 CDC68-like Related to aminopeptidase P and aminope 96.69
PRK14575406 putative peptidase; Provisional 96.69
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 96.67
cd01088291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 96.64
PRK12896255 methionine aminopeptidase; Reviewed 96.56
PRK12318291 methionine aminopeptidase; Provisional 96.46
PRK14576405 putative endopeptidase; Provisional 96.44
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 96.37
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 96.3
PRK07281286 methionine aminopeptidase; Reviewed 96.26
TIGR00495389 crvDNA_42K 42K curved DNA binding protein. Protein 96.17
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 96.03
PLN03158396 methionine aminopeptidase; Provisional 95.99
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 95.56
PRK10879438 proline aminopeptidase P II; Provisional 95.21
PTZ00053470 methionine aminopeptidase 2; Provisional 95.11
COG0024255 Map Methionine aminopeptidase [Translation, riboso 94.67
PF0443830 zf-HIT: HIT zinc finger; InterPro: IPR007529 Zinc 93.43
PRK13607443 proline dipeptidase; Provisional 92.27
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 91.97
PF0988959 DUF2116: Uncharacterized protein containing a Zn-r 90.36
KOG2738 369 consensus Putative methionine aminopeptidase [Post 90.31
PRK0041862 DNA gyrase inhibitor; Reviewed 86.55
COG302465 Uncharacterized protein conserved in bacteria [Fun 85.44
PRK0134357 zinc-binding protein; Provisional 84.12
PF0388457 DUF329: Domain of unknown function (DUF329); Inter 80.13
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=1.4e-86  Score=602.92  Aligned_cols=272  Identities=58%  Similarity=0.975  Sum_probs=258.0

Q ss_pred             cccccccc--cCCccccccchhhhcCCCCCCCcccChhhhhhchhHHHHHhhhhhcCCCCCCCCCCcccccchhhcccCC
Q 021917           10 TTSLSCVR--CGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKAKLSAPGTGENSSLVSEGWRYCIKKGQ   87 (305)
Q Consensus        10 ~~~~~c~~--c~~~~~l~cp~c~~~~~~~~~~~fc~q~cfk~~w~~hk~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (305)
                      .....|.+  |+++|+||||+|+|++|+  .+|||+|+|||.+|.+||++|.++.               .     ....
T Consensus         4 ~~~~~c~~~~c~~~a~l~Cp~c~~~~i~--~~~fc~q~cf~~~w~~hK~~h~~~~---------------~-----~~~~   61 (369)
T KOG2738|consen    4 IAKISCEGLQCGSEASLQCPTCLKLGIK--SAYFCAQECFKNSWLSHKKLHRKAL---------------R-----IRKE   61 (369)
T ss_pred             chhceeeccccCChhhccCchhhhcCCC--cccccCchhhhcchhhhhhhcccch---------------h-----hhhh
Confidence            45678966  999999999999999997  5899999999999999999996430               0     2345


Q ss_pred             CCCCCCCCCCcCCCCccccCCCCcccCCcCCCccccccCCCCCCCCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Q 021917           88 ARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAAR  167 (305)
Q Consensus        88 ~~~~~~~~~~~~g~~~p~~~s~~~~vp~~i~~p~ya~~g~~~~e~~~~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~  167 (305)
                      +.|+|||.|.|+|+||||++||+|.||++|++|+|+++|.+.+|+.+.......|++++||+.||+||+|++++|+.+..
T Consensus        62 g~~~p~p~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~Aa~  141 (369)
T KOG2738|consen   62 GQYNPWPKFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDYAAT  141 (369)
T ss_pred             ccCCCCccccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            67889999999999999999999999999999999999999999887766678899999999999999999999999999


Q ss_pred             hcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCCCCCCCCCCCEEEEEeeceeCcEEeceeeE
Q 021917          168 MIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNET  247 (305)
Q Consensus       168 ~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p~~r~L~~GDiV~iDv~~~~~GY~~D~~RT  247 (305)
                      +++||+||+|||++||++++++|+|||||||++||||+|+|+|+++|||+||.|+|++|||||||+++|++|||+|+++|
T Consensus       142 ~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHGDlneT  221 (369)
T KOG2738|consen  142 LVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDLNET  221 (369)
T ss_pred             hcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEeccccCccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcCCceeeec
Q 021917          248 YFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVEIKQ  303 (305)
Q Consensus       248 ~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~~vv~~~  303 (305)
                      |+||+++++.++|+++++|||+.||+++|||++|++|+++|++++.++||+|||.+
T Consensus       222 ffvG~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~y  277 (369)
T KOG2738|consen  222 FFVGNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSY  277 (369)
T ss_pred             eEeeccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhh
Confidence            99999999999999999999999999999999999999999999999999999975

>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>KOG2737 consensus Putative metallopeptidase [General function prediction only] Back     alignment and domain information
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2776 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism] Back     alignment and domain information
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional Back     alignment and domain information
>KOG2775 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] Back     alignment and domain information
>PF01753 zf-MYND: MYND finger; InterPro: IPR002893 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF04438 zf-HIT: HIT zinc finger; InterPro: IPR007529 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>PF09889 DUF2116: Uncharacterized protein containing a Zn-ribbon (DUF2116); InterPro: IPR019216 This entry contains various hypothetical prokaryotic proteins whose functions are unknown Back     alignment and domain information
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK00418 DNA gyrase inhibitor; Reviewed Back     alignment and domain information
>COG3024 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK01343 zinc-binding protein; Provisional Back     alignment and domain information
>PF03884 DUF329: Domain of unknown function (DUF329); InterPro: IPR005584 The biological function of these short proteins is unknown, but they contain four conserved cysteines, suggesting that they all bind zinc Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query305
4fli_A 326 Human Metap1 With Bengamide Analog Y16, In Mn Form 9e-66
2b3h_A329 Crystal Structure Of Human Methionine Aminopeptidas 1e-65
2g6p_A304 Crystal Structure Of Truncated (Delta 1-89) Human M 1e-65
3s6b_A368 Crystal Structure Of Methionine Aminopeptidase 1b F 8e-56
4fuk_A 337 Aminopeptidase From Trypanosoma Brucei Length = 337 1e-52
3iu7_A288 M. Tuberculosis Methionine Aminopeptidase With Mn I 5e-44
1y1n_A291 Identification Of Sh3 Motif In M. Tuberculosis Meth 5e-44
3pka_A285 M. Tuberculosis Metap With Bengamide Analog Y02, In 5e-44
3ror_A291 Crystal Structure Of C105s Mutant Of Mycobacterium 6e-43
4mat_A 278 E.Coli Methionine Aminopeptidase His79ala Mutant Le 4e-35
2p99_A261 E. Coli Methionine Aminopeptidase Monometalated Wit 5e-35
1c27_A263 E. Coli Methionine Aminopeptidase:norleucine Phosph 5e-35
3mat_A265 E.coli Methionine Aminopeptidase Transition-state I 5e-35
2gg0_A263 Novel Bacterial Methionine Aminopeptidase Inhibitor 5e-35
2mat_A264 E.Coli Methionine Aminopeptidase At 1.9 Angstrom Re 5e-35
2p98_A262 E. Coli Methionine Aminopeptidase Monometalated Wit 5e-35
4a6v_A265 X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn 5e-35
1xnz_A264 Crystal Structure Of Mn(Ii) Form Of E. Coli. Methio 5e-35
2gu4_A263 E. Coli Methionine Aminopeptidase In Complex With N 8e-35
2gtx_A261 Structural Basis Of Catalysis By Mononuclear Methio 1e-34
3mx6_A262 Crystal Structure Of Methionine Aminopeptidase From 3e-34
3mr1_A252 Crystal Structure Of Methionine Aminopeptidase From 4e-34
1o0x_A262 Crystal Structure Of Methionine Aminopeptidase (Tm1 1e-24
1qxw_A252 Crystal Structure Of Staphyloccocus Aureus In Compl 3e-22
3tav_A286 Crystal Structure Of A Methionine Aminopeptidase Fr 5e-21
3tb5_A264 Crystal Structure Of The Enterococcus Faecalis Meth 3e-18
2dfi_A 301 Crystal Structure Of Pf-Map(1-292)-C Length = 301 1e-12
1xgs_A 295 Methionine Aminopeptidase From Hyperthermophile Pyr 1e-12
1pv9_A348 Prolidase From Pyrococcus Furiosus Length = 348 9e-10
3q6d_A356 Xaa-Pro Dipeptidase From Bacillus Anthracis. Length 1e-09
1wy2_A351 Crystal Structure Of The Prolidase From Pyrococcus 3e-09
2v3z_A 440 Glu383ala Escherichia Coli Aminopeptidase P In Comp 7e-09
1wl9_A 440 Structure Of Aminopeptidase P From E. Coli Length = 7e-09
2bwv_A 440 His361ala Escherichia Coli Aminopeptidase P Length 8e-09
2bwy_A 440 Glu383ala Escherichia Coli Aminopeptidase P Length 2e-08
2bww_A 440 His350ala Escherichia Coli Aminopeptidase P Length 2e-08
1jaw_A 440 Aminopeptidase P From E. Coli Low Ph Form Length = 2e-08
1m35_A 440 Aminopeptidase P From Escherichia Coli Length = 440 2e-08
2bws_A 440 His243ala Escherichia Coli Aminopeptidase P Length 1e-07
2bwx_A 441 His354ala Escherichia Coli Aminopeptidase P Length 2e-07
2bwt_A 440 Asp260ala Escherichia Coli Aminopeptidase P Length 2e-07
2bwu_A 440 Asp271ala Escherichia Coli Aminopeptidase P Length 2e-07
2v6c_A 353 Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) 5e-05
2zsg_A359 Crystal Structure Of X-Pro Aminopeptidase From Ther 5e-05
2q8k_A 401 The Crystal Structure Of Ebp1 Length = 401 3e-04
3j2i_A 394 Structure Of Late Pre-60s Ribosomal Subunits With N 3e-04
>pdb|4FLI|A Chain A, Human Metap1 With Bengamide Analog Y16, In Mn Form Length = 326 Back     alignment and structure 
Iteration: 1

 Score =  246 bits (629), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 121/207 (58%), Positives = 150/207 (72%), Gaps = 3/207 (1%)
Query: 96  FDWTGTLRP-YPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIK--TPDQIERMR 152
           + +TG LRP YP+     VP+YI+ PD+A       E    L+   +IK  + + IE MR
Sbjct: 2   YRYTGKLRPHYPLMPTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEGMR 61
Query: 153 ETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEV 212
             CR+AREVLD AA MI+PGVTT+EID  VH A I    YPSPLNY+ FPKSCCTSVNEV
Sbjct: 62  LVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEV 121
Query: 213 ICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAI 272
           ICHGIPD R L++GDIVN+D+T+Y  G HGDLNET+FVG  D+ +R+LVQ TYECL +AI
Sbjct: 122 ICHGIPDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAI 181
Query: 273 SIVKPGVRFREIGEVINRHATMSGFSV 299
             VKPGVR+RE+G +I +HA  +GFSV
Sbjct: 182 DAVKPGVRYRELGNIIQKHAQANGFSV 208
>pdb|2B3H|A Chain A, Crystal Structure Of Human Methionine Aminopeptidase Type I With A Third Cobalt In The Active Site Length = 329 Back     alignment and structure
>pdb|2G6P|A Chain A, Crystal Structure Of Truncated (Delta 1-89) Human Methionine Aminopeptidase Type 1 In Complex With Pyridyl Pyrimidine Derivative Length = 304 Back     alignment and structure
>pdb|3S6B|A Chain A, Crystal Structure Of Methionine Aminopeptidase 1b From Plasmodium Falciparum, Pf10_0150 Length = 368 Back     alignment and structure
>pdb|4FUK|A Chain A, Aminopeptidase From Trypanosoma Brucei Length = 337 Back     alignment and structure
>pdb|3IU7|A Chain A, M. Tuberculosis Methionine Aminopeptidase With Mn Inhibitor A02 Length = 288 Back     alignment and structure
>pdb|1Y1N|A Chain A, Identification Of Sh3 Motif In M. Tuberculosis Methionine Aminopeptidase Suggests A Mode Of Interaction With The Ribosome Length = 291 Back     alignment and structure
>pdb|3PKA|A Chain A, M. Tuberculosis Metap With Bengamide Analog Y02, In Mn Form Length = 285 Back     alignment and structure
>pdb|3ROR|A Chain A, Crystal Structure Of C105s Mutant Of Mycobacterium Tuberculosis Methionine Aminopeptidase Length = 291 Back     alignment and structure
>pdb|4MAT|A Chain A, E.Coli Methionine Aminopeptidase His79ala Mutant Length = 278 Back     alignment and structure
>pdb|2P99|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye6 Length = 261 Back     alignment and structure
>pdb|1C27|A Chain A, E. Coli Methionine Aminopeptidase:norleucine Phosphonate Complex Length = 263 Back     alignment and structure
>pdb|3MAT|A Chain A, E.coli Methionine Aminopeptidase Transition-state Inhibitor Complex Length = 265 Back     alignment and structure
>pdb|2GG0|A Chain A, Novel Bacterial Methionine Aminopeptidase Inhibitors Length = 263 Back     alignment and structure
>pdb|2MAT|A Chain A, E.Coli Methionine Aminopeptidase At 1.9 Angstrom Resolution Length = 264 Back     alignment and structure
>pdb|2P98|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye7 Length = 262 Back     alignment and structure
>pdb|4A6V|A Chain A, X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn Complexes Length = 265 Back     alignment and structure
>pdb|1XNZ|A Chain A, Crystal Structure Of Mn(Ii) Form Of E. Coli. Methionine Aminopeptidase In Complex With 5-(2-Chlorophenyl)furan-2- Carboxylic Acid Length = 264 Back     alignment and structure
>pdb|2GU4|A Chain A, E. Coli Methionine Aminopeptidase In Complex With Nlep, 1: 0.5, Di-Metalated Length = 263 Back     alignment and structure
>pdb|2GTX|A Chain A, Structural Basis Of Catalysis By Mononuclear Methionine Aminopeptidase Length = 261 Back     alignment and structure
>pdb|3MX6|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Bound To Methionine Length = 262 Back     alignment and structure
>pdb|3MR1|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Length = 252 Back     alignment and structure
>pdb|1O0X|A Chain A, Crystal Structure Of Methionine Aminopeptidase (Tm1478) From Thermotoga Maritima At 1.90 A Resolution Length = 262 Back     alignment and structure
>pdb|1QXW|A Chain A, Crystal Structure Of Staphyloccocus Aureus In Complex With An Aminoketone Inhibitor 54135. Length = 252 Back     alignment and structure
>pdb|3TAV|A Chain A, Crystal Structure Of A Methionine Aminopeptidase From Mycobacterium Abscessus Length = 286 Back     alignment and structure
>pdb|3TB5|A Chain A, Crystal Structure Of The Enterococcus Faecalis Methionine Aminopeptidase Apo Form Length = 264 Back     alignment and structure
>pdb|2DFI|A Chain A, Crystal Structure Of Pf-Map(1-292)-C Length = 301 Back     alignment and structure
>pdb|1XGS|A Chain A, Methionine Aminopeptidase From Hyperthermophile Pyrococcus Furiosus Length = 295 Back     alignment and structure
>pdb|1PV9|A Chain A, Prolidase From Pyrococcus Furiosus Length = 348 Back     alignment and structure
>pdb|3Q6D|A Chain A, Xaa-Pro Dipeptidase From Bacillus Anthracis. Length = 356 Back     alignment and structure
>pdb|1WY2|A Chain A, Crystal Structure Of The Prolidase From Pyrococcus Horikoshii Ot3 Length = 351 Back     alignment and structure
>pdb|2V3Z|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P In Complex With Substrate Length = 440 Back     alignment and structure
>pdb|1WL9|A Chain A, Structure Of Aminopeptidase P From E. Coli Length = 440 Back     alignment and structure
>pdb|2BWV|A Chain A, His361ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWY|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWW|A Chain A, His350ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|1JAW|A Chain A, Aminopeptidase P From E. Coli Low Ph Form Length = 440 Back     alignment and structure
>pdb|1M35|A Chain A, Aminopeptidase P From Escherichia Coli Length = 440 Back     alignment and structure
>pdb|2BWS|A Chain A, His243ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWT|A Chain A, Asp260ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWU|A Chain A, Asp271ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2V6C|A Chain A, Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) Length = 353 Back     alignment and structure
>pdb|2ZSG|A Chain A, Crystal Structure Of X-Pro Aminopeptidase From Thermotoga Maritima Msb8 Length = 359 Back     alignment and structure
>pdb|2Q8K|A Chain A, The Crystal Structure Of Ebp1 Length = 401 Back     alignment and structure
>pdb|3J2I|A Chain A, Structure Of Late Pre-60s Ribosomal Subunits With Nuclear Export Factor Arx1 Bound At The Peptide Exit Tunnel Length = 394 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query305
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 1e-133
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 1e-123
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 1e-120
3mx6_A262 Methionine aminopeptidase; seattle structural geno 9e-92
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 2e-89
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 4e-82
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 3e-74
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 6e-74
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 2e-69
1xgs_A 295 Methionine aminopeptidase; hyperthermophIle; 1.75A 1e-46
2q8k_A 401 Proliferation-associated protein 2G4; EBP1, PA2G4, 1e-45
1b6a_A 478 Methionine aminopeptidase; angiogenesis inhibitor; 3e-38
2nw5_A 360 Methionine aminopeptidase 2; metap2, structural ge 7e-38
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 2e-25
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 8e-24
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 1e-22
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 4e-22
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 4e-22
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 4e-22
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 3e-21
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 3e-17
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 7e-05
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 4e-14
3biq_A 467 FACT complex subunit SPT16; PITA-bread, aminopepti 4e-14
3l24_A 517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 5e-12
2iw2_A 494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 1e-10
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 1e-10
3rva_A 451 Organophosphorus acid anhydrolase; PITA-bread fold 2e-10
2v3z_A 440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 2e-10
2dj8_A60 Protein CBFA2T1; zinc finger MYND domain, protein 9e-06
2jw6_A52 Deformed epidermal autoregulatory factor 1 homolo; 1e-05
2d8q_A70 BLU protein, zinc finger MYND domain containing pr 3e-05
2od1_A60 Protein CBFA2T1; zinc finger, cross-braced topolog 3e-05
2odd_A64 Protein CBFA2T1; MYND zinc finger, cross-braced to 4e-05
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Length = 368 Back     alignment and structure
 Score =  380 bits (979), Expect = e-133
 Identities = 107/279 (38%), Positives = 154/279 (55%), Gaps = 19/279 (6%)

Query: 24  LQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKAKLSAPGTGENSSLVSEGWRYCI 83
           +                      F+     H    +K  LS            + W Y  
Sbjct: 1   MHHHHHHSSGRE--------NLYFQGEKEDHLKTIVKKHLSPE---NFDPTNRKYWVY-- 47

Query: 84  KKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIK 143
                      +F +TG +RP+P+S    VP++IE PD+A+   P+ E     +  + + 
Sbjct: 48  ---DDHLKNFVNFKFTGDVRPWPLSKINHVPSHIERPDYAISSIPESELIYKRKSDIYVN 104

Query: 144 TPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPK 203
             ++I+R+RE C + R+ LD A  ++ PGVTTDEIDR VHE  I    YPS LNY+ FPK
Sbjct: 105 NEEEIQRIREACILGRKTLDYAHTLVSPGVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPK 164

Query: 204 SCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEA---SRQL 260
           SCCTSVNE++CHGIPD R L+ GDI+NID++V+YKGVH DLNETYFVG+ ++     ++L
Sbjct: 165 SCCTSVNEIVCHGIPDYRPLKSGDIINIDISVFYKGVHSDLNETYFVGDINDVPKEGKEL 224

Query: 261 VQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSV 299
           V+  Y  L +AI   KPG+ ++ IG +I+ + +   FSV
Sbjct: 225 VETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVSKKNFSV 263
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Length = 329 Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A Length = 285 Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Length = 262 Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Length = 263 Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Length = 252 Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Length = 264 Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Length = 262 Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Length = 286 Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401 Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Length = 356 Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Length = 378 Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Length = 470 Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Length = 470 Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444 Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Length = 467 Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Length = 517 Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Length = 494 Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Length = 427 Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Length = 451 Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Length = 440 Back     alignment and structure
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1 Length = 60 Back     alignment and structure
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1 Length = 52 Back     alignment and structure
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A Length = 70 Back     alignment and structure
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens} Length = 60 Back     alignment and structure
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens} Length = 64 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query305
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 100.0
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 100.0
4fuk_A 337 Methionine aminopeptidase; structural genomics con 100.0
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 100.0
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 100.0
3mx6_A262 Methionine aminopeptidase; seattle structural geno 100.0
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 100.0
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 100.0
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 100.0
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 100.0
2q8k_A 401 Proliferation-associated protein 2G4; EBP1, PA2G4, 100.0
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 100.0
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 100.0
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 100.0
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 99.98
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 99.98
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 99.97
3fm3_A 358 Methionine aminopeptidase 2; metap2, structural ge 99.97
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 99.97
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 99.97
2v3z_A 440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 99.97
1xgs_A 295 Methionine aminopeptidase; hyperthermophIle; 1.75A 99.97
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 99.97
2iw2_A 494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 99.96
3rva_A 451 Organophosphorus acid anhydrolase; PITA-bread fold 99.96
2nw5_A 360 Methionine aminopeptidase 2; metap2, structural ge 99.96
3biq_A 467 FACT complex subunit SPT16; PITA-bread, aminopepti 99.96
3l24_A 517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 99.96
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 99.96
1b6a_A 478 Methionine aminopeptidase; angiogenesis inhibitor; 99.96
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 99.95
3ctz_A 623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 99.93
4b6a_t 614 Probable metalloprotease ARX1; large ribosomal sub 99.78
2dj8_A60 Protein CBFA2T1; zinc finger MYND domain, protein 97.85
2od1_A60 Protein CBFA2T1; zinc finger, cross-braced topolog 97.7
2d8q_A70 BLU protein, zinc finger MYND domain containing pr 97.69
2jw6_A52 Deformed epidermal autoregulatory factor 1 homolo; 97.6
2odd_A64 Protein CBFA2T1; MYND zinc finger, cross-braced to 97.51
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 96.6
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 96.57
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 96.38
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 96.31
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 96.3
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 96.27
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 96.26
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 96.21
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 96.05
3mx6_A262 Methionine aminopeptidase; seattle structural geno 96.02
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 96.02
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 95.98
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 95.94
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 95.94
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 95.93
3qww_A433 SET and MYND domain-containing protein 2; methyltr 95.91
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 95.85
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 95.79
3n71_A 490 Histone lysine methyltransferase SMYD1; heart deve 95.63
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 95.4
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 95.36
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 95.32
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 95.14
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 95.1
2yqq_A56 Zinc finger HIT domain-containing protein 3; struc 94.9
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 94.64
1x4s_A59 Protein FON, zinc finger HIT domain containing pro 94.16
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 93.66
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 93.42
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 93.06
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 92.32
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 92.23
4fuk_A337 Methionine aminopeptidase; structural genomics con 92.13
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 91.81
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 91.79
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 91.63
3fm3_A 358 Methionine aminopeptidase 2; metap2, structural ge 90.38
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
Probab=100.00  E-value=2.4e-51  Score=393.19  Aligned_cols=227  Identities=45%  Similarity=0.808  Sum_probs=213.7

Q ss_pred             CCcccccchhhcccCCCCCCCCCCCCcCCCCccccCCCCcccCCcCCCccccccCCCCCCCCCccccccccCCHHHHHHH
Q 021917           72 SSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERM  151 (305)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~s~~~~vp~~i~~p~ya~~g~~~~e~~~~~~~~r~vKs~~EIe~m  151 (305)
                      .++....|.|     +.++++||+|.|+|+||||++||++.||++|++|+|+.+|.|..++.......+.|||++||+.|
T Consensus        38 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~i~~p~y~~~~~~~~~~~~~~~~~~~IKs~~EIe~m  112 (368)
T 3s6b_A           38 DPTNRKYWVY-----DDHLKNFVNFKFTGDVRPWPLSKINHVPSHIERPDYAISSIPESELIYKRKSDIYVNNEEEIQRI  112 (368)
T ss_dssp             CTTCCGGGGG-----STTGGGGTTCCCSSSCCCCCCCCCCCCCTTSCCCTTTTTSCCHHHHSCCCTTCCCCCCHHHHHHH
T ss_pred             CCCCCccccc-----ccccCCCCCCCcCCcccccccCCCCCCCcCCCCCccccCCCChhhhhccccCCceeCCHHHHHHH
Confidence            4566778876     45789999999999999999999999999999999999998877654444457899999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCCCCCCCCCCCEEEE
Q 021917          152 RETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNI  231 (305)
Q Consensus       152 R~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p~~r~L~~GDiV~i  231 (305)
                      |+|+++++++|+.+.+.++||+||.||++.++.++.++|++|++++|.+||+++|+|+|++++|++|++++|++||+|+|
T Consensus       113 R~A~~ia~~al~~~~~~ikpGvTE~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~sg~N~~i~H~~p~~r~L~~GDiV~i  192 (368)
T 3s6b_A          113 REACILGRKTLDYAHTLVSPGVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCCTSVNEIVCHGIPDYRPLKSGDIINI  192 (368)
T ss_dssp             HHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEETTEEECCCCCSCBCCTTCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCCeEEEcCccccccCCCCCccccCCCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeeceeCcEEeceeeEEEec---CCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcCCceeeec
Q 021917          232 DVTVYYKGVHGDLNETYFVG---NADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVEIKQ  303 (305)
Q Consensus       232 Dv~~~~~GY~~D~~RT~~vG---~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~~vv~~~  303 (305)
                      |++++++||++|++|||+||   ++++++++++++++++++++++++|||++++||+++++++++++||+++++.
T Consensus       193 D~G~~~~GY~sDitRT~~vGg~~~~s~e~~~ly~~v~ea~~aai~~ikPG~~~~dI~~aa~~~i~~~G~~~~~~~  267 (368)
T 3s6b_A          193 DISVFYKGVHSDLNETYFVGDINDVPKEGKELVETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVSKKNFSVVRSY  267 (368)
T ss_dssp             EEEEEETTEEEEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHHHHCCTTCBTHHHHHHHHHHHHTTTCEECCSC
T ss_pred             EEeEEECcEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCcccce
Confidence            99999999999999999999   8999999999999999999999999999999999999999999999987543
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1 Back     alignment and structure
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens} Back     alignment and structure
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A Back     alignment and structure
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1 Back     alignment and structure
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens} Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2 Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 305
d2gg2a1262 d.127.1.1 (A:3-264) Methionine aminopeptidase {Esc 8e-37
d1o0xa_249 d.127.1.1 (A:) Methionine aminopeptidase {Thermoto 1e-27
d1pv9a2221 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal 6e-23
d1b6aa2295 d.127.1.1 (A:110-374,A:449-478) Methionine aminope 9e-22
d1qxya_249 d.127.1.1 (A:) Methionine aminopeptidase {Staphylo 4e-21
d1chma2246 d.127.1.1 (A:157-402) Creatinase, catalytic (C-ter 1e-19
d2v3za2 264 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal 2e-18
d1xgsa2218 d.127.1.1 (A:1-194,A:272-295) Methionine aminopept 2e-15
d2dj8a147 g.85.1.1 (A:8-54) Zinc finger MYND domain-containi 7e-06
d2jw6a138 g.85.1.1 (A:503-540) Zinc finger MYND domain-conta 1e-05
d2dana147 g.85.1.1 (A:8-54) Zinc finger MYND domain-containi 3e-04
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Length = 262 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Escherichia coli [TaxId: 562]

 Score =  130 bits (327), Expect = 8e-37
 Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 2/162 (1%)

Query: 140 VEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYH 199
           + IKTP+ IE+MR   R+A EVL+     ++PGV+T E+DR+ ++  +      S    +
Sbjct: 1   ISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGY 60

Query: 200 F-FPKSCCTSVNEVICHGIP-DSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEAS 257
             +PKS C S+NEV+CHGIP D++ L+DGDIVNIDVTV   G HGD ++ + VG      
Sbjct: 61  HGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMG 120

Query: 258 RQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSV 299
            +L + T E L  A+ +VKPG+  REIG  I +     GFSV
Sbjct: 121 ERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSV 162
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 221 Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Length = 249 Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Length = 246 Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 264 Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 218 Back     information, alignment and structure
>d2dj8a1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]} Length = 47 Back     information, alignment and structure
>d2jw6a1 g.85.1.1 (A:503-540) Zinc finger MYND domain-containing protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]} Length = 38 Back     information, alignment and structure
>d2dana1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing protein 10, ZMYND10 {Human (Homo sapiens) [TaxId: 9606]} Length = 47 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query305
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 99.98
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 99.98
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 99.97
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 99.97
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 99.97
d2v3za2 264 Aminopeptidase P, C-terminal domain {Escherichia c 99.96
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 99.95
d1b6aa2295 Methionine aminopeptidase {Human (Homo sapiens) [T 99.94
d2dana147 Zinc finger MYND domain-containing protein 10, ZMY 98.49
d2dj8a147 Zinc finger MYND domain-containing protein 2, MTG8 98.33
d2jw6a138 Zinc finger MYND domain-containing protein 2, MTG8 98.23
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 97.17
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 96.5
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 96.29
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 96.18
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 95.56
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 95.55
d2v3za2264 Aminopeptidase P, C-terminal domain {Escherichia c 94.57
d1lv3a_65 Hypothetical zinc finger protein YacG {Escherichia 88.95
d1b6aa2 295 Methionine aminopeptidase {Human (Homo sapiens) [T 86.55
d1x4sa146 Zinc finger HIT domain containing protein 2, ZNHIT 83.83
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.98  E-value=6.5e-32  Score=241.06  Aligned_cols=164  Identities=35%  Similarity=0.609  Sum_probs=155.3

Q ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCC
Q 021917          139 VVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIP  218 (305)
Q Consensus       139 ~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p  218 (305)
                      ||.|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.+.|+.+.+.++..++.+++.+.++...|+.+
T Consensus         1 m~~IKs~~Ei~~mr~A~~ia~~~~~~~~~~i~~G~te~ev~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (249)
T d1o0xa_           1 MIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVVHGLP   80 (249)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEETTBCSCCCC
T ss_pred             CCccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHhhhhhhccccccccccccccCcccccceee
Confidence            58899999999999999999999999999999999999999999999999999988888888888889999988888766


Q ss_pred             -CCCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcCC
Q 021917          219 -DSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGF  297 (305)
Q Consensus       219 -~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~  297 (305)
                       +++.+++||+|.+|+++.++||++|++|||++|++++++++++++++++++++++.+|||++++||++++++++++.||
T Consensus        81 ~~~~~~~~gd~v~id~g~~~~gy~~D~~RT~~~G~~s~~~~~~~~~~~~a~~a~i~~~kpG~~~~dv~~~~~~~~~~~g~  160 (249)
T d1o0xa_          81 LKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGF  160 (249)
T ss_dssp             CTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHTTC
T ss_pred             ccccccccccceeeecceeecceecccccceeecCcChhhHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhcCC
Confidence             5778999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeee
Q 021917          298 SVEIK  302 (305)
Q Consensus       298 ~vv~~  302 (305)
                      +..++
T Consensus       161 ~~~~~  165 (249)
T d1o0xa_         161 NVIRD  165 (249)
T ss_dssp             EECCS
T ss_pred             eeecC
Confidence            87654
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dana1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing protein 10, ZMYND10 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dj8a1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2jw6a1 g.85.1.1 (A:503-540) Zinc finger MYND domain-containing protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lv3a_ g.39.1.9 (A:) Hypothetical zinc finger protein YacG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1x4sa1 g.85.1.2 (A:8-53) Zinc finger HIT domain containing protein 2, ZNHIT2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure