Citrus Sinensis ID: 021926


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-----
MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIREVYFD
cccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccHHHccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcHHHHHcccHHHHHHHHHHHHccHHcHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHcccccccccHHHHHHHHHHHHcccccccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccc
cccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccHHHccHHHHHHHHHHHccHHHHHccccHHHHHHcHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
msdlklrpeisFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKktasgdgvsvskyrgLMGTVVTIAREEGLWALWNGVIAGLHRQCIYgglriglydpvktflvgsdfvgdiPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAegklpsgvprryygalDAYCTIVRQEGLGalwtglgpniaRNAIVNAAELASYDQVKETIlkipgftdnIFTHILAGLGAGLFAVCIGSpidvvksrmmgdsaykNTVDCFIKTLKYEGFLAFYKgflpnfsrlgswNVIMFLTLEQAKKVFIREVYFD
MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLqkktasgdgvsvskyrGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQaegklpsgvprryYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIREVYFD
MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIREVYFD
********EISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIREVYF*
************AQTFLCSAFAACFAELCTIPLDTAKVRLQLQ**************RGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLV****VGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEG****GVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIREVYF*
MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQ********VSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIREVYFD
********EISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIRE****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooo
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIREVYFD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query305 2.2.26 [Sep-21-2011]
Q9ZWG1305 Mitochondrial uncoupling yes no 1.0 1.0 0.803 1e-146
O81845306 Mitochondrial uncoupling no no 0.963 0.960 0.757 1e-132
Q9N2I9311 Mitochondrial uncoupling yes no 0.934 0.916 0.476 1e-72
O77792311 Mitochondrial uncoupling yes no 0.950 0.932 0.466 2e-72
P56499308 Mitochondrial uncoupling yes no 0.914 0.905 0.480 3e-72
P56501308 Mitochondrial uncoupling yes no 0.914 0.905 0.477 8e-72
O97562309 Mitochondrial uncoupling yes no 0.914 0.902 0.482 1e-71
P55916312 Mitochondrial uncoupling yes no 0.940 0.919 0.477 2e-71
O97649308 Mitochondrial uncoupling no no 0.940 0.931 0.461 4e-71
Q3SZI5309 Mitochondrial uncoupling no no 0.914 0.902 0.472 4e-71
>sp|Q9ZWG1|PUMP2_ARATH Mitochondrial uncoupling protein 2 OS=Arabidopsis thaliana GN=PUMP2 PE=2 SV=1 Back     alignment and function desciption
 Score =  518 bits (1333), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 245/305 (80%), Positives = 275/305 (90%)

Query: 1   MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGL 60
           M+D K R EISF +TF+CSAFAACFAELCTIPLDTAKVRLQLQ+K  +GDG ++ KYRG 
Sbjct: 1   MADFKPRIEISFLETFICSAFAACFAELCTIPLDTAKVRLQLQRKIPTGDGENLPKYRGS 60

Query: 61  MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 120
           +GT+ TIAREEG+  LW GVIAGLHRQCIYGGLRIGLY+PVKT LVGSDF+GDIPLYQKI
Sbjct: 61  IGTLATIAREEGISGLWKGVIAGLHRQCIYGGLRIGLYEPVKTLLVGSDFIGDIPLYQKI 120

Query: 121 FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 180
            AALLTGAIAI+VANPTDLVKVRLQ+EGKLP+GVPRRY GA+DAY TIV+ EG+ ALWTG
Sbjct: 121 LAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRRYAGAVDAYFTIVKLEGVSALWTG 180

Query: 181 LGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 240
           LGPNIARNAIVNAAELASYDQ+KETI+KIP F D++ TH+LAGL AG FAVCIGSPIDVV
Sbjct: 181 LGPNIARNAIVNAAELASYDQIKETIMKIPFFRDSVLTHLLAGLAAGFFAVCIGSPIDVV 240

Query: 241 KSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 300
           KSRMMGDS Y+NTVDCFIKT+K EG +AFYKGFLPNF+RLG+WN IMFLTLEQ KKVF+R
Sbjct: 241 KSRMMGDSTYRNTVDCFIKTMKTEGIMAFYKGFLPNFTRLGTWNAIMFLTLEQVKKVFLR 300

Query: 301 EVYFD 305
           EV +D
Sbjct: 301 EVLYD 305




PUMPS are mitochondrial transporter proteins that create proton leaks across the inner mitochondrial membrane, thus uncoupling oxidative phosphorylation. This leads to a decrease in the efficiency of oxidative phosphorylation and an increase in heat production. May be involved in protecting plant cells against oxidative stress damage.
Arabidopsis thaliana (taxid: 3702)
>sp|O81845|PUMP1_ARATH Mitochondrial uncoupling protein 1 OS=Arabidopsis thaliana GN=PUMP1 PE=1 SV=1 Back     alignment and function description
>sp|Q9N2I9|UCP3_CANFA Mitochondrial uncoupling protein 3 OS=Canis familiaris GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|O77792|UCP3_BOVIN Mitochondrial uncoupling protein 3 OS=Bos taurus GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|P56499|UCP3_RAT Mitochondrial uncoupling protein 3 OS=Rattus norvegicus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|P56501|UCP3_MOUSE Mitochondrial uncoupling protein 3 OS=Mus musculus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|O97562|UCP2_PIG Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1 Back     alignment and function description
>sp|P55916|UCP3_HUMAN Mitochondrial uncoupling protein 3 OS=Homo sapiens GN=UCP3 PE=1 SV=1 Back     alignment and function description
>sp|O97649|UCP3_PIG Mitochondrial uncoupling protein 3 OS=Sus scrofa GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|Q3SZI5|UCP2_BOVIN Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query305
224059342305 predicted protein [Populus trichocarpa] 1.0 1.0 0.826 1e-146
255558838305 mitochondrial uncoupling protein, putati 1.0 1.0 0.819 1e-146
297796843305 ATUCP2 [Arabidopsis lyrata subsp. lyrata 1.0 1.0 0.806 1e-145
18424178305 uncoupling protein 2 [Arabidopsis thalia 1.0 1.0 0.803 1e-144
449450782300 PREDICTED: mitochondrial uncoupling prot 0.931 0.946 0.802 1e-139
7106157303 uncoupling protein a [Symplocarpus renif 0.986 0.993 0.788 1e-137
356496148305 PREDICTED: mitochondrial uncoupling prot 0.986 0.986 0.771 1e-137
224087657305 predicted protein [Populus trichocarpa] 0.986 0.986 0.778 1e-137
359478882302 PREDICTED: mitochondrial uncoupling prot 0.986 0.996 0.794 1e-137
359806830305 uncharacterized protein LOC100809667 [Gl 0.986 0.986 0.768 1e-136
>gi|224059342|ref|XP_002299831.1| predicted protein [Populus trichocarpa] gi|222847089|gb|EEE84636.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 252/305 (82%), Positives = 277/305 (90%)

Query: 1   MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGL 60
           M+DLK   +ISF + FLCSAFAACFAE CTIPLDTAKVRLQLQ+KT + +GVS+ KYRGL
Sbjct: 1   MADLKPSSDISFVEIFLCSAFAACFAEFCTIPLDTAKVRLQLQRKTFASEGVSLPKYRGL 60

Query: 61  MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 120
           +GTV TIAREEGL ALW G+ AGLHRQ IYGGLRIGLY+PVK+FLVGSDFVGDIPLYQKI
Sbjct: 61  LGTVATIAREEGLAALWKGITAGLHRQFIYGGLRIGLYEPVKSFLVGSDFVGDIPLYQKI 120

Query: 121 FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 180
            AALLTGA+AIV+ANPTDLVKVRLQAEGKLP+GVP RY GALDAY TIVRQEGLGALWTG
Sbjct: 121 LAALLTGAMAIVIANPTDLVKVRLQAEGKLPAGVPGRYAGALDAYFTIVRQEGLGALWTG 180

Query: 181 LGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 240
           LGPNIARNAI+NAAELASYD+VK+TIL+IPGFTD+ FTH+LAGLGAG FAVCIGSPIDVV
Sbjct: 181 LGPNIARNAIINAAELASYDEVKQTILQIPGFTDSAFTHVLAGLGAGFFAVCIGSPIDVV 240

Query: 241 KSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 300
           KSRMMGDS+YKNTVDCFIKTLK EG LAFYKGFLPNF RLGSWNV+MFLTLEQ KK+   
Sbjct: 241 KSRMMGDSSYKNTVDCFIKTLKNEGILAFYKGFLPNFGRLGSWNVVMFLTLEQVKKIVTG 300

Query: 301 EVYFD 305
           + Y+D
Sbjct: 301 QAYYD 305




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558838|ref|XP_002520442.1| mitochondrial uncoupling protein, putative [Ricinus communis] gi|223540284|gb|EEF41855.1| mitochondrial uncoupling protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297796843|ref|XP_002866306.1| ATUCP2 [Arabidopsis lyrata subsp. lyrata] gi|297312141|gb|EFH42565.1| ATUCP2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18424178|ref|NP_568894.1| uncoupling protein 2 [Arabidopsis thaliana] gi|75315972|sp|Q9ZWG1.1|PUMP2_ARATH RecName: Full=Mitochondrial uncoupling protein 2; Short=AtPUMP2 gi|4063007|dbj|BAA36222.1| uncoupling protein [Arabidopsis thaliana] gi|9759228|dbj|BAB09640.1| uncoupling protein [Arabidopsis thaliana] gi|21593775|gb|AAM65742.1| uncoupling protein AtUCP2 [Arabidopsis thaliana] gi|332009741|gb|AED97124.1| uncoupling protein 2 [Arabidopsis thaliana] gi|385137896|gb|AFI41209.1| uncoupling protein 2, partial [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449450782|ref|XP_004143141.1| PREDICTED: mitochondrial uncoupling protein 2-like [Cucumis sativus] gi|449496627|ref|XP_004160183.1| PREDICTED: mitochondrial uncoupling protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|7106157|dbj|BAA92172.1| uncoupling protein a [Symplocarpus renifolius] Back     alignment and taxonomy information
>gi|356496148|ref|XP_003516932.1| PREDICTED: mitochondrial uncoupling protein 3-like [Glycine max] Back     alignment and taxonomy information
>gi|224087657|ref|XP_002308202.1| predicted protein [Populus trichocarpa] gi|118483177|gb|ABK93493.1| unknown [Populus trichocarpa] gi|222854178|gb|EEE91725.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359478882|ref|XP_003632181.1| PREDICTED: mitochondrial uncoupling protein 2-like isoform 2 [Vitis vinifera] gi|297745960|emb|CBI16016.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359806830|ref|NP_001241311.1| uncharacterized protein LOC100809667 [Glycine max] gi|255635380|gb|ACU18043.1| unknown [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query305
TAIR|locus:2154593305 UCP2 "uncoupling protein 2" [A 1.0 1.0 0.803 7.9e-133
TAIR|locus:2080300306 PUMP1 "plant uncoupling mitoch 0.963 0.960 0.757 7.4e-121
ZFIN|ZDB-GENE-040426-1317309 ucp3 "uncoupling protein 3" [D 0.931 0.919 0.484 4.4e-68
RGD|3933308 Ucp3 "uncoupling protein 3 (mi 0.914 0.905 0.480 6.5e-67
MGI|MGI:1099787308 Ucp3 "uncoupling protein 3 (mi 0.914 0.905 0.477 1.3e-66
UNIPROTKB|O97562309 UCP2 "Mitochondrial uncoupling 0.914 0.902 0.482 1.3e-66
UNIPROTKB|Q9N2I9311 UCP3 "Mitochondrial uncoupling 0.934 0.916 0.476 2.2e-66
UNIPROTKB|O77792311 UCP3 "Mitochondrial uncoupling 0.950 0.932 0.466 2.2e-66
UNIPROTKB|F1PWF9311 UCP3 "Mitochondrial uncoupling 0.934 0.916 0.476 3.6e-66
MGI|MGI:109354309 Ucp2 "uncoupling protein 2 (mi 0.914 0.902 0.479 5.8e-66
TAIR|locus:2154593 UCP2 "uncoupling protein 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1302 (463.4 bits), Expect = 7.9e-133, P = 7.9e-133
 Identities = 245/305 (80%), Positives = 275/305 (90%)

Query:     1 MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGL 60
             M+D K R EISF +TF+CSAFAACFAELCTIPLDTAKVRLQLQ+K  +GDG ++ KYRG 
Sbjct:     1 MADFKPRIEISFLETFICSAFAACFAELCTIPLDTAKVRLQLQRKIPTGDGENLPKYRGS 60

Query:    61 MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 120
             +GT+ TIAREEG+  LW GVIAGLHRQCIYGGLRIGLY+PVKT LVGSDF+GDIPLYQKI
Sbjct:    61 IGTLATIAREEGISGLWKGVIAGLHRQCIYGGLRIGLYEPVKTLLVGSDFIGDIPLYQKI 120

Query:   121 FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 180
              AALLTGAIAI+VANPTDLVKVRLQ+EGKLP+GVPRRY GA+DAY TIV+ EG+ ALWTG
Sbjct:   121 LAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRRYAGAVDAYFTIVKLEGVSALWTG 180

Query:   181 LGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 240
             LGPNIARNAIVNAAELASYDQ+KETI+KIP F D++ TH+LAGL AG FAVCIGSPIDVV
Sbjct:   181 LGPNIARNAIVNAAELASYDQIKETIMKIPFFRDSVLTHLLAGLAAGFFAVCIGSPIDVV 240

Query:   241 KSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 300
             KSRMMGDS Y+NTVDCFIKT+K EG +AFYKGFLPNF+RLG+WN IMFLTLEQ KKVF+R
Sbjct:   241 KSRMMGDSTYRNTVDCFIKTMKTEGIMAFYKGFLPNFTRLGTWNAIMFLTLEQVKKVFLR 300

Query:   301 EVYFD 305
             EV +D
Sbjct:   301 EVLYD 305




GO:0005739 "mitochondrion" evidence=ISM
GO:0006839 "mitochondrial transport" evidence=IEA
GO:0017077 "oxidative phosphorylation uncoupler activity" evidence=ISS
GO:0031966 "mitochondrial membrane" evidence=IEA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006007 "glucose catabolic process" evidence=RCA
GO:0009853 "photorespiration" evidence=RCA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2080300 PUMP1 "plant uncoupling mitochondrial protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1317 ucp3 "uncoupling protein 3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|3933 Ucp3 "uncoupling protein 3 (mitochondrial, proton carrier)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1099787 Ucp3 "uncoupling protein 3 (mitochondrial, proton carrier)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|O97562 UCP2 "Mitochondrial uncoupling protein 2" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q9N2I9 UCP3 "Mitochondrial uncoupling protein 3" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|O77792 UCP3 "Mitochondrial uncoupling protein 3" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PWF9 UCP3 "Mitochondrial uncoupling protein 3" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:109354 Ucp2 "uncoupling protein 2 (mitochondrial, proton carrier)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q06143DIC1_YEASTNo assigned EC number0.32020.85240.8724yesno
P55916UCP3_HUMANNo assigned EC number0.47790.94090.9198yesno
Q9W720UCP2_DANRENo assigned EC number0.46360.91470.9yesno
O77792UCP3_BOVINNo assigned EC number0.46640.95080.9324yesno
Q9ZWG1PUMP2_ARATHNo assigned EC number0.80321.01.0yesno
P56501UCP3_MOUSENo assigned EC number0.47750.91470.9058yesno
Q54PY7M2OM_DICDINo assigned EC number0.39240.91140.8742yesno
O97562UCP2_PIGNo assigned EC number0.48260.91470.9029yesno
Q9N2I9UCP3_CANFANo assigned EC number0.47600.93440.9163yesno
P56499UCP3_RATNo assigned EC number0.48090.91470.9058yesno
O81845PUMP1_ARATHNo assigned EC number0.75750.96390.9607nono

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_fgenesh4_pg.C_LG_I1666
hypothetical protein (305 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query305
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-24
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-23
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 8e-21
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-19
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-10
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 94.2 bits (235), Expect = 2e-24
 Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 213 TDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMM-----GDSAYKNTVDCFIKTLKYEGFL 267
             +    +LAG  AG  A  +  P+DVVK+R+      G   YK  +DCF K  K EG  
Sbjct: 2   PLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIR 61

Query: 268 AFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 300
             YKG LPN  R+     I F T E  KK+ ++
Sbjct: 62  GLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLK 94


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 305
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0760 302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.98
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.98
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 99.98
KOG0761 361 consensus Mitochondrial carrier protein CGI-69 [En 99.97
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.97
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.96
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 99.95
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.95
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.95
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.95
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.95
KOG0765333 consensus Predicted mitochondrial carrier protein 99.95
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.94
KOG1519297 consensus Predicted mitochondrial carrier protein 99.94
KOG0766297 consensus Predicted mitochondrial carrier protein 99.94
KOG0036463 consensus Predicted mitochondrial carrier protein 99.94
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.93
KOG2745321 consensus Mitochondrial carrier protein [General f 99.91
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.8
KOG1519297 consensus Predicted mitochondrial carrier protein 99.78
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.77
KOG2954427 consensus Mitochondrial carrier protein [General f 99.77
KOG2745321 consensus Mitochondrial carrier protein [General f 99.68
KOG2954427 consensus Mitochondrial carrier protein [General f 98.88
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=5e-62  Score=385.89  Aligned_cols=282  Identities=27%  Similarity=0.401  Sum_probs=254.2

Q ss_pred             HHHHHHhhHHHHHhhhhhccHHHHHHHHHhccccCCCCCCCccccCCHHHHHHHHHhhhchhHhhcchHHHHHHHhhhcc
Q 021926           13 AQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGG   92 (305)
Q Consensus        13 ~~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~lyrG~~~~~~~~~~~~~   92 (305)
                      +..+++|+.+|+++++++||+|.+|+|+|++...    ......|+++.++++.|+|.||++|||||+.|++++..++++
T Consensus         6 ~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~----~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWg   81 (299)
T KOG0764|consen    6 WEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGR----TSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWG   81 (299)
T ss_pred             hhhhhhhhhhhhhhhhhccchhHhhhhhhhccCc----cccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHH
Confidence            4556999999999999999999999999998322    234568999999999999999999999999999999999999


Q ss_pred             eeeeccHHHHhhhccCCCCCCCcHHHHHHHHHHHhHhhhhhcchHHHHHHHHHhcCCCCCCCCCCcCCHHHHHHHHHHhh
Q 021926           93 LRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQE  172 (305)
Q Consensus        93 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~v~~Pld~vk~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~  172 (305)
                      +||.+||..|..+.+...+...++..++.+++.||++++++++|++++|||++.+....  ....|+++++++++|+++|
T Consensus        82 iYF~~Y~~~K~~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~--~~~~Y~~~f~a~rki~k~E  159 (299)
T KOG0764|consen   82 LYFFFYDFLKSFITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNV--QSTAYKGMFDALRKIYKEE  159 (299)
T ss_pred             HHHHHHHHHHHHHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccc--cccccccHHHHHHHHHHHH
Confidence            99999999999997766666668999999999999999999999999999999997633  3358999999999999999


Q ss_pred             hhhhhhhcchHHHHHHHHHHhhHHHhHHHHHHHHhcCCCCC----ChHHHHHHHHHHHHHHHHHhcccHHHHHHHhcCC-
Q 021926          173 GLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFT----DNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGD-  247 (305)
Q Consensus       173 G~~~ly~G~~~~l~~~~~~~~~~~~~y~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~~~~~~Pld~i~~r~q~~-  247 (305)
                      |++|||+|+.|.++. +...+++|+.||.+|....+..+.+    .+....+..+.++.++|+.+|||.+|+|+|||.+ 
T Consensus       160 G~rgLY~GlVP~L~G-vshgAiQF~~YE~lK~~~~~~~~~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~~  238 (299)
T KOG0764|consen  160 GFRGLYKGLVPGLLG-VSHGAIQFPAYEELKLRKNRKQGRSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQS  238 (299)
T ss_pred             hHHHHHhhhhhHhhh-hchhhhhhhhHHHHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhcc
Confidence            999999999999998 7899999999999999986543332    2346667777799999999999999999999986 


Q ss_pred             --CCCCCHHHHHHHHHHhhcccccccchhhhhHhHHHHHHHHHHHHHHHHHHhhhh
Q 021926          248 --SAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIRE  301 (305)
Q Consensus       248 --~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~y~~~~~~~~~~  301 (305)
                        +.|.+.+++++++|+.||++|||||+.++++|.+|.+.++|.+||.+++++..+
T Consensus       239 ~~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv~~~L~~~  294 (299)
T KOG0764|consen  239 DNPRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENVKHFLVTH  294 (299)
T ss_pred             cCcccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHHHHHHhcc
Confidence              689999999999999999999999999999999999999999999999987654



>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query305
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 6e-72
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-14
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 6e-19
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 267 bits (682), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 138/288 (47%), Positives = 189/288 (65%), Gaps = 9/288 (3%) Query: 16 FLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVS-KYRGLMGTVVTIAREEGLW 74 FL + AAC A+L T PLDTAKVRLQ+Q ++ + S +YRG++GT++T+ R EG Sbjct: 5 FLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPR 64 Query: 75 ALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLV-GSDFVGDIPLYQKIFAALLTGAIAIVV 133 +L+NG++AGL RQ + +RIGLYD VK F GS+ G + ++ A TGA+A+ V Sbjct: 65 SLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAG---IGSRLLAGSTTGALAVAV 121 Query: 134 ANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNA 193 A PTD+VKVR QA+ + G RRY ++AY TI R+EG+ LW G PN+ARNAIVN Sbjct: 122 AQPTDVVKVRFQAQARAGGG--RRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNC 179 Query: 194 AELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDS--AYK 251 AEL +YD +K+T+LK TD++ H + GAG I SP+DVVK+R M + Y Sbjct: 180 AELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYH 239 Query: 252 NTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFI 299 + C + L+ EG AFYKGF+P+F RLGSWNV+MF+T EQ K+ + Sbjct: 240 SAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALM 287
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query305
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-132
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 2e-45
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-40
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-57
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 7e-32
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  377 bits (970), Expect = e-132
 Identities = 133/293 (45%), Positives = 184/293 (62%), Gaps = 7/293 (2%)

Query: 16  FLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGD-GVSVSKYRGLMGTVVTIAREEGLW 74
           FL +  AAC A+L T PLDTAKVRLQ+Q ++       + ++YRG++GT++T+ R EG  
Sbjct: 5   FLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPR 64

Query: 75  ALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVA 134
           +L+NG++AGL RQ  +  +RIGLYD VK F           +  ++ A   TGA+A+ VA
Sbjct: 65  SLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS--EHAGIGSRLLAGSTTGALAVAVA 122

Query: 135 NPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAA 194
            PTD+VKVR QA+ +      RRY   ++AY TI R+EG+  LW G  PN+ARNAIVN A
Sbjct: 123 QPTDVVKVRFQAQARAGG--GRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCA 180

Query: 195 ELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSA--YKN 252
           EL +YD +K+T+LK    TD++  H  +  GAG     I SP+DVVK+R M  +   Y +
Sbjct: 181 ELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHS 240

Query: 253 TVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIREVYFD 305
              C +  L+ EG  AFYKGF+P+F RLGSWNV+MF+T EQ K+  +      
Sbjct: 241 AGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQSR 293


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query305
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=5.3e-59  Score=398.97  Aligned_cols=283  Identities=47%  Similarity=0.807  Sum_probs=252.6

Q ss_pred             HHHHHhhHHHHHhhhhhccHHHHHHHHHhccccCCC-CCCCccccCCHHHHHHHHHhhhchhHhhcchHHHHHHHhhhcc
Q 021926           14 QTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASG-DGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGG   92 (305)
Q Consensus        14 ~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~G~~~lyrG~~~~~~~~~~~~~   92 (305)
                      ..+++|++||+++.++++|+|++|+|+|++...... .......++++++++++++++||+++||||+.+++++.++..+
T Consensus         3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~   82 (303)
T 2lck_A            3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS   82 (303)
T ss_dssp             CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred             hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHH
Confidence            368899999999999999999999999998543100 0011246889999999999999999999999999999999999


Q ss_pred             eeeeccHHHHhhhccCCCCCCCcHHHHHHHHHHHhHhhhhhcchHHHHHHHHHhcCCCCCCCCCCcCCHHHHHHHHHHhh
Q 021926           93 LRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQE  172 (305)
Q Consensus        93 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~v~~Pld~vk~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~  172 (305)
                      ++|.+||.+++.+.+...  ..+....+++|++||+++.++++|+|+||+|+|++...  .....|.++++++++|+++|
T Consensus        83 i~f~~ye~~k~~~~~~~~--~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~--~~~~~~~~~~~~~~~i~~~e  158 (303)
T 2lck_A           83 VRIGLYDSVKQFYTKGSE--HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARA--GGGRRYQSTVEAYKTIAREE  158 (303)
T ss_dssp             HTTTHHHHHHHHHSCCCS--SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSC--CCSSSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCc--CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhccccc--CCCCCCCCHHHHHHHHHHhc
Confidence            999999999999865421  35678899999999999999999999999999998542  22347899999999999999


Q ss_pred             hhhhhhhcchHHHHHHHHHHhhHHHhHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHhcccHHHHHHHhcCC--CCC
Q 021926          173 GLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGD--SAY  250 (305)
Q Consensus       173 G~~~ly~G~~~~l~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~Pld~i~~r~q~~--~~~  250 (305)
                      |+++||||+.++++++++..+++|.+||.+++.+.+....+.+....+++|++||++++++++|+|+||+|+|.+  ..|
T Consensus       159 G~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y  238 (303)
T 2lck_A          159 GIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQY  238 (303)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSC
T ss_pred             ChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhcccccc
Confidence            999999999999999999999999999999998876554556778899999999999999999999999999997  459


Q ss_pred             CCHHHHHHHHHHhhcccccccchhhhhHhHHHHHHHHHHHHHHHHHHhhh
Q 021926          251 KNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR  300 (305)
Q Consensus       251 ~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~y~~~~~~~~~  300 (305)
                      .++++|+++++++||++|||||+.++++|.+|.+++.|.+||.+|+.+.+
T Consensus       239 ~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~  288 (303)
T 2lck_A          239 HSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMA  288 (303)
T ss_dssp             CSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred             CCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999987754



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 305
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-37
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-06
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score =  133 bits (335), Expect = 1e-37
 Identities = 72/294 (24%), Positives = 116/294 (39%), Gaps = 16/294 (5%)

Query: 10  ISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAR 69
           +SF + FL    AA  ++    P++  K+ LQ+Q   AS    +  +Y+G++  VV I +
Sbjct: 4   LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQ--HASKQISAEKQYKGIIDCVVRIPK 61

Query: 70  EEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGD---IPLYQKIFAALLT 126
           E+G  + W G +A + R      L     D  K   +G               + +    
Sbjct: 62  EQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAA 121

Query: 127 GAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIA 186
           GA ++    P D  + RL A+    +   R + G  +    I + +GL  L+ G   ++ 
Sbjct: 122 GATSLCFVYPLDFARTRLAADVGKGA-AQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQ 180

Query: 187 RNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMG 246
              I  AA    YD      +       +I    +        A  +  P D V+ RMM 
Sbjct: 181 GIIIYRAAYFGVYDT--AKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 238

Query: 247 DSA-------YKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQ 293
            S        Y  TVDC+ K  K EG  AF+KG   N  R G     + +  ++
Sbjct: 239 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLR-GMGGAFVLVLYDE 291


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query305
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1ppjg_75 Ubiquinone-binding protein QP-C of cytochrome bc1 80.72
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=7.3e-54  Score=363.88  Aligned_cols=281  Identities=25%  Similarity=0.384  Sum_probs=249.0

Q ss_pred             cchhhHHHHHHhhHHHHHhhhhhccHHHHHHHHHhccccCCCCCCCccccCCHHHHHHHHHhhhchhHhhcchHHHHHHH
Q 021926            8 PEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQ   87 (305)
Q Consensus         8 ~~~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~lyrG~~~~~~~~   87 (305)
                      ++.++...+++|++|++++.+++||||+||+|+|++....  .......++++++++++++++||+++||||+.+.+++.
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~--~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~   79 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASK--QISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRY   79 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCS--SCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCC--CCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhh
Confidence            4678999999999999999999999999999999987653  23345678999999999999999999999999999999


Q ss_pred             hhhcceeeeccHHHHhhhccCCCCCC---CcHHHHHHHHHHHhHhhhhhcchHHHHHHHHHhcCCCCCCCCCCcCCHHHH
Q 021926           88 CIYGGLRIGLYDPVKTFLVGSDFVGD---IPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDA  164 (305)
Q Consensus        88 ~~~~~~~f~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~ag~~~~~v~~Pld~vk~r~q~~~~~~~~~~~~~~~~~~~  164 (305)
                      .+...++|.+++.+++.+.+......   ......+.+|.+|++++.++++|+|++|+|+|.+..... ..+.+.+..++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~-~~~~~~~~~~~  158 (292)
T d1okca_          80 FPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGA-AQREFTGLGNC  158 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSST-TTCSCSSHHHH
T ss_pred             hcccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccc-cccccccHHHH
Confidence            99999999999999999876543333   234567889999999999999999999999999865332 33478899999


Q ss_pred             HHHHHHhhhhhhhhhcchHHHHHHHHHHhhHHHhHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHhcccHHHHHHHh
Q 021926          165 YCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRM  244 (305)
Q Consensus       165 ~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~Pld~i~~r~  244 (305)
                      +++++++||+++||+|+.+++++++++.+++|..||.+++.+.+.  ........+++++++++++++++||+||||+|+
T Consensus       159 ~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~  236 (292)
T d1okca_         159 ITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP--KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRM  236 (292)
T ss_dssp             HHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG--GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc--cccchHHHHHHHHHHHHHHhhccccHHHHHHHH
Confidence            999999999999999999999999999999999999999876553  345678889999999999999999999999999


Q ss_pred             cCC-------CCCCCHHHHHHHHHHhhcccccccchhhhhHhHHHHHHHHHHHHHHH
Q 021926          245 MGD-------SAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQA  294 (305)
Q Consensus       245 q~~-------~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~y~~~  294 (305)
                      |.+       ..|.++++|+++++++||++|||||+.++++|.++ .++.|.+||.+
T Consensus       237 q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         237 MMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             HhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            987       35889999999999999999999999999999755 68889999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
>d1ppjg_ f.23.13.1 (G:) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure