Citrus Sinensis ID: 021930
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 305 | ||||||
| 224075359 | 304 | predicted protein [Populus trichocarpa] | 0.996 | 1.0 | 0.754 | 1e-137 | |
| 118488282 | 325 | unknown [Populus trichocarpa] | 0.967 | 0.907 | 0.753 | 1e-133 | |
| 255574454 | 304 | molybdopterin cofactor sulfurase, putati | 0.996 | 1.0 | 0.734 | 1e-132 | |
| 225423585 | 311 | PREDICTED: MOSC domain-containing protei | 0.993 | 0.974 | 0.723 | 1e-129 | |
| 15221559 | 318 | molybdenum cofactor sulfurase-like prote | 0.993 | 0.952 | 0.687 | 1e-122 | |
| 449433473 | 301 | PREDICTED: MOSC domain-containing protei | 0.983 | 0.996 | 0.691 | 1e-122 | |
| 297846066 | 318 | molybdenum cofactor sulfurase family pro | 0.990 | 0.949 | 0.683 | 1e-121 | |
| 255574460 | 304 | molybdopterin cofactor sulfurase, putati | 0.990 | 0.993 | 0.663 | 1e-120 | |
| 226493836 | 321 | mo-molybdopterin cofactor sulfurase [Zea | 0.990 | 0.940 | 0.651 | 1e-117 | |
| 238009102 | 321 | unknown [Zea mays] | 0.990 | 0.940 | 0.648 | 1e-116 |
| >gi|224075359|ref|XP_002304601.1| predicted protein [Populus trichocarpa] gi|222842033|gb|EEE79580.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 230/305 (75%), Positives = 268/305 (87%), Gaps = 1/305 (0%)
Query: 1 MEAAAKVKSIFVYPIKSCRGISVCQQAPLTPTGFRWDRQWMVINNNGRAYTQRNEPKLAL 60
MEA AKV SIF+YP+KSCRGIS+ Q APLTPTGFRWDR W+V+N GRAYTQR EPKLAL
Sbjct: 1 MEATAKVSSIFIYPVKSCRGISLSQ-APLTPTGFRWDRNWLVVNYRGRAYTQRVEPKLAL 59
Query: 61 VETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRDIADGVSVWEWCGSALAEGA 120
VE ELP+EAF EGWEPT SFM I+APGM LKISL KP ++A+GVSVWEW GSAL EGA
Sbjct: 60 VEIELPDEAFSEGWEPTKNSFMKIKAPGMSVLKISLMKPSEVAEGVSVWEWSGSALDEGA 119
Query: 121 EASNWFTNYLGKPSRLVRYNAESETRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKL 180
EA+ WF++YLGKPS+LVR+NA SETR +DP YA G K MFSD +PFML+SQGSLDALN+L
Sbjct: 120 EAAKWFSDYLGKPSQLVRFNAASETRLIDPNYAPGHKTMFSDLFPFMLISQGSLDALNQL 179
Query: 181 LKEPIPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAGP 240
L+EP+PINRFRPNILV+GCEPFSED WTE+RI++FTF+GVKLCSRCK+PTINQDTG G
Sbjct: 180 LREPVPINRFRPNILVEGCEPFSEDLWTEIRISRFTFEGVKLCSRCKVPTINQDTGIGGT 239
Query: 241 EPNETLKQIRSDKVLRPGRKQRGKIYFGQNMVCKDNLTEGNGKVLKLGDPVFVLKKVTSA 300
EPNETL +IRSDKVLRP +KQ+GKIYFGQN+V K+N +EG+GK++ +GDPVFVLKKV+S
Sbjct: 240 EPNETLMKIRSDKVLRPDKKQQGKIYFGQNLVWKENPSEGHGKIVNVGDPVFVLKKVSSV 299
Query: 301 AEAAA 305
AEAAA
Sbjct: 300 AEAAA 304
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118488282|gb|ABK95960.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255574454|ref|XP_002528139.1| molybdopterin cofactor sulfurase, putative [Ricinus communis] gi|223532437|gb|EEF34230.1| molybdopterin cofactor sulfurase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|225423585|ref|XP_002273557.1| PREDICTED: MOSC domain-containing protein 1, mitochondrial [Vitis vinifera] gi|297738033|emb|CBI27234.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|15221559|ref|NP_174376.1| molybdenum cofactor sulfurase-like protein [Arabidopsis thaliana] gi|9755390|gb|AAF98197.1|AC000107_20 F17F8.22 [Arabidopsis thaliana] gi|26452771|dbj|BAC43466.1| unknown protein [Arabidopsis thaliana] gi|29824153|gb|AAP04037.1| unknown protein [Arabidopsis thaliana] gi|332193171|gb|AEE31292.1| molybdenum cofactor sulfurase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|449433473|ref|XP_004134522.1| PREDICTED: MOSC domain-containing protein 2, mitochondrial-like [Cucumis sativus] gi|449527406|ref|XP_004170702.1| PREDICTED: MOSC domain-containing protein 2, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297846066|ref|XP_002890914.1| molybdenum cofactor sulfurase family protein [Arabidopsis lyrata subsp. lyrata] gi|297336756|gb|EFH67173.1| molybdenum cofactor sulfurase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|255574460|ref|XP_002528142.1| molybdopterin cofactor sulfurase, putative [Ricinus communis] gi|223532440|gb|EEF34233.1| molybdopterin cofactor sulfurase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|226493836|ref|NP_001148545.1| mo-molybdopterin cofactor sulfurase [Zea mays] gi|195620298|gb|ACG31979.1| mo-molybdopterin cofactor sulfurase [Zea mays] gi|414590195|tpg|DAA40766.1| TPA: mo-molybdopterin cofactor sulfurase [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|238009102|gb|ACR35586.1| unknown [Zea mays] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 305 | ||||||
| TAIR|locus:2015746 | 318 | AT1G30910 [Arabidopsis thalian | 0.990 | 0.949 | 0.689 | 2.2e-114 | |
| TAIR|locus:2156369 | 308 | AT5G44720 [Arabidopsis thalian | 0.993 | 0.983 | 0.616 | 1.3e-102 | |
| MGI|MGI:1914497 | 338 | Marc2 "mitochondrial amidoxime | 0.885 | 0.798 | 0.333 | 1.1e-34 | |
| RGD|621257 | 338 | Marc2 "mitochondrial amidoxime | 0.888 | 0.801 | 0.334 | 7.4e-34 | |
| UNIPROTKB|O88994 | 338 | Marc2 "MOSC domain-containing | 0.888 | 0.801 | 0.334 | 7.4e-34 | |
| UNIPROTKB|Q5VT66 | 337 | MARC1 "MOSC domain-containing | 0.885 | 0.801 | 0.337 | 1.2e-33 | |
| UNIPROTKB|G5E6I5 | 343 | MOSC1 "Uncharacterized protein | 0.895 | 0.795 | 0.331 | 1.5e-33 | |
| UNIPROTKB|Q1LZH1 | 336 | MARC2 "MOSC domain-containing | 0.888 | 0.806 | 0.333 | 6.7e-33 | |
| UNIPROTKB|F1NXH1 | 348 | MARC2 "Uncharacterized protein | 0.891 | 0.781 | 0.298 | 2.3e-32 | |
| UNIPROTKB|G3X6L2 | 335 | MOSC2 "Uncharacterized protein | 0.885 | 0.805 | 0.330 | 3.7e-32 |
| TAIR|locus:2015746 AT1G30910 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1128 (402.1 bits), Expect = 2.2e-114, P = 2.2e-114
Identities = 209/303 (68%), Positives = 244/303 (80%)
Query: 2 EAAAKVKSIFVYPIKSCRGISVCQQAPLTPTGFRWDRQWMVINNNGRAYTQRNEPKLALV 61
E AA+V S+FVYPIKSCRGIS+ QA LTPTGFRWDR W+++N+ GR TQR EPKL+L+
Sbjct: 16 EVAARVSSLFVYPIKSCRGISL-SQAALTPTGFRWDRNWLIVNSKGRGLTQRVEPKLSLI 74
Query: 62 ETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRDIADGVSVWEWCGSALAEGAE 121
E E+P AF E WEP S MV+RAPGM ALK+SL+KP IADGVSVWEW GSAL EG E
Sbjct: 75 EVEMPKHAFGEDWEPEKSSNMVVRAPGMDALKVSLAKPDKIADGVSVWEWSGSALDEGEE 134
Query: 122 ASNWFTNYLGKPSRLVRYNAESETRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLL 181
AS WFTN++GKP RLVR+N+ ETRPVDP YA G MFSD YPF+L+SQGSLD+LNKLL
Sbjct: 135 ASQWFTNFVGKPCRLVRFNSAYETRPVDPNYAPGHIAMFSDMYPFLLISQGSLDSLNKLL 194
Query: 182 KEPIPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAGPE 241
KEP+PINRFRPNI VDGCEPF+ED WTE+ IN FTF GVKLCSRCK+PTI+Q+TG G E
Sbjct: 195 KEPVPINRFRPNIFVDGCEPFAEDLWTEILINGFTFHGVKLCSRCKVPTISQETGIGGQE 254
Query: 242 PNETLKQIRSDKVLRPGRKQRGKIYFGQNMVCKDNLTEGNGKVLKLGDPVFVLKKVTSAA 301
P ETL+ RSDKVL+P K GKIYFGQNMV KD +G GK +++GD V VL+K++S A
Sbjct: 255 PIETLRTFRSDKVLQPKSKPHGKIYFGQNMVWKDGFGDGIGKTIEIGDSVVVLRKLSSPA 314
Query: 302 EAA 304
EAA
Sbjct: 315 EAA 317
|
|
| TAIR|locus:2156369 AT5G44720 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1914497 Marc2 "mitochondrial amidoxime reducing component 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|621257 Marc2 "mitochondrial amidoxime reducing component 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O88994 Marc2 "MOSC domain-containing protein 2, mitochondrial" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5VT66 MARC1 "MOSC domain-containing protein 1, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G5E6I5 MOSC1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q1LZH1 MARC2 "MOSC domain-containing protein 2, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NXH1 MARC2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G3X6L2 MOSC2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| grail3.0047000902 | SubName- Full=Putative uncharacterized protein; (305 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 305 | |||
| COG3217 | 270 | COG3217, COG3217, Uncharacterized Fe-S protein [Ge | 2e-48 | |
| pfam03476 | 118 | pfam03476, MOSC_N, MOSC N-terminal beta barrel dom | 3e-43 | |
| PLN02724 | 805 | PLN02724, PLN02724, Molybdenum cofactor sulfurase | 3e-38 | |
| pfam03473 | 124 | pfam03473, MOSC, MOSC domain | 1e-15 |
| >gnl|CDD|225758 COG3217, COG3217, Uncharacterized Fe-S protein [General function prediction only] | Back alignment and domain information |
|---|
Score = 162 bits (412), Expect = 2e-48
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 33/293 (11%)
Query: 4 AAKVKSIFVYPIKSCRGISVCQQAPLTPTGFRWDRQWMVINNNGRAYTQRNEPKLALVET 63
A + +++YP+KS RG + +A + +G DR++M+++ +GR T R P +
Sbjct: 1 MATLSQLYIYPVKSLRGERL-SRALVDASGLAGDRRFMLVDPDGRFITARRRPAMVRFTP 59
Query: 64 ELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRDIADGVSVWEWCGSALAEGAEAS 123
++ +R ++ + V VW +A A G A+
Sbjct: 60 AYEHD--------------GLRLTAPDGEELYVRFADAQRAPVEVWGDHFTADAAGDAAN 105
Query: 124 NWFTNYLGKPSRLVRYNAESETRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKE 183
+W + +LG+ L R++ R V + F+D YP +L + SL L + +
Sbjct: 106 DWLSGFLGRAVSL-RWDGAGFARRVKAG--PAVPVTFADGYPILLFNTASLADLRRRVPA 162
Query: 184 PIPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDA--GPE 241
+ + RFRPN++V+G + F+ED+W +RI F VK CSRC T++ DTG+ G E
Sbjct: 163 NLEMERFRPNLVVEGEDAFAEDSWKSIRIGGVRFDVVKPCSRCIFTTVDPDTGERRPGGE 222
Query: 242 PNETLKQIRSDKVLRPGRKQRGKIYFGQNMVCKDNLTEGNGKVLKLGDPVFVL 294
P TL + R+ G + FGQN++ + N +++GD V VL
Sbjct: 223 PLFTLNRFRT-------NPDAGGVLFGQNLIAR------NEGRIRVGDAVEVL 262
|
Length = 270 |
| >gnl|CDD|217584 pfam03476, MOSC_N, MOSC N-terminal beta barrel domain | Back alignment and domain information |
|---|
| >gnl|CDD|215384 PLN02724, PLN02724, Molybdenum cofactor sulfurase | Back alignment and domain information |
|---|
| >gnl|CDD|217583 pfam03473, MOSC, MOSC domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 305 | |||
| PLN02724 | 805 | Molybdenum cofactor sulfurase | 100.0 | |
| COG3217 | 270 | Uncharacterized Fe-S protein [General function pre | 100.0 | |
| KOG2362 | 336 | consensus Uncharacterized Fe-S protein [General fu | 100.0 | |
| PF03476 | 120 | MOSC_N: MOSC N-terminal beta barrel domain; InterP | 100.0 | |
| PF03473 | 133 | MOSC: MOSC domain; InterPro: IPR005302 Molybdenum | 99.96 | |
| KOG2142 | 728 | consensus Molybdenum cofactor sulfurase [Coenzyme | 99.38 | |
| PRK14499 | 308 | molybdenum cofactor biosynthesis protein MoaC/MOSC | 98.69 | |
| PRK11536 | 223 | 6-N-hydroxylaminopurine resistance protein; Provis | 98.02 | |
| COG2258 | 210 | Uncharacterized protein conserved in bacteria [Fun | 98.01 |
| >PLN02724 Molybdenum cofactor sulfurase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-65 Score=533.40 Aligned_cols=269 Identities=33% Similarity=0.569 Sum_probs=233.9
Q ss_pred CceEEeeeeeecccCCCCeeeeceeeeeccccccCceeEEEecCCceeeecCCcceeEEEeecCCcccccCCCCCCCceE
Q 021930 3 AAAKVKSIFVYPIKSCRGISVCQQAPLTPTGFRWDRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFM 82 (305)
Q Consensus 3 ~~~~V~~L~iyPVKS~~g~~v~~~~~l~~~Gl~~DR~~~l~d~~g~~lt~r~~p~L~~i~~~~~~~~~~~~~~~~~~~~l 82 (305)
..++|++|||||||||+|++| ++|+|++.||.|||+|||+|.+|+++|||++|+|++|++.++.+ ++.|
T Consensus 516 ~~~~v~~l~iYPVKS~~g~~v-~~a~~~~~Gl~~DR~~~lvd~~g~~~t~r~~p~l~~i~~~~~~~----------~~~l 584 (805)
T PLN02724 516 DSHRLKSITVYPIKSCAGFSV-ERWPLSETGLLYDREWMIQSLTGEILTQKKVPEMCLITTFIDLE----------SGKL 584 (805)
T ss_pred CCCEEEEEEEeccccCCCcee-eEEEEecccccccceEEEEcCCCcEEEcccCceEEEEEeEEecC----------CCeE
Confidence 456899999999999999999 99999999999999999999999999999999999999999532 4679
Q ss_pred EEEeCCCC-eEEEeccCCCC--CccceEEecccccccccchHHHHHHHHhhCCCeEEEEecCCCCCCCCC-----CCCC-
Q 021930 83 VIRAPGMQ-ALKISLSKPRD--IADGVSVWEWCGSALAEGAEASNWFTNYLGKPSRLVRYNAESETRPVD-----PKYA- 153 (305)
Q Consensus 83 ~l~~p~~~-~l~v~l~~~~~--~~~~~~v~~~~~~~~d~g~~~~~wlS~~lg~~~rL~~~~~~~~~r~~~-----~~~~- 153 (305)
+|++|+++ ++.|++..... ....+.+|++.+.+++||+++++|||++||++|+|+++.+... |... +.+.
T Consensus 585 ~l~~~~~~~~l~v~l~~~~~~~~~~~v~v~~~~~~~~~~g~~~~~w~S~~lg~~~~Lv~~~~~~~-r~~~~~~~~~~~~~ 663 (805)
T PLN02724 585 VVRAPRCDHKLEIPLESDSQHEESGEVILCGNRAESMSYGTEINEWFTNALGRRCTLVRKSSSNT-RVCRNRNPSHSPCG 663 (805)
T ss_pred EEEcCCCCccEEEeCCCcccccccceeEEeCCcceeEecchhHHHHHHHHhCCceEEEEeCCccc-cccccccccccccc
Confidence 99999987 69999976432 3457899999999999999999999999999999999976543 3221 1111
Q ss_pred -CCcceeccCCCceeeeeHhHHHHHHHHhCC-------CCCCCcccceEEEeCCCCCCCCCcceEEECCeEEEEeeeCCC
Q 021930 154 -AGEKIMFSDCYPFMLLSQGSLDALNKLLKE-------PIPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSR 225 (305)
Q Consensus 154 -~~~~~~f~D~~P~llis~aSl~~l~~~l~~-------~v~~~RFRpNIvI~g~~pf~Ed~W~~l~IG~~~~~~~~~c~R 225 (305)
...+.+|+|.+||||+|++||++||++++. +++++||||||||+|.+||+||.|++|+||+++|++++||.|
T Consensus 664 ~~~~~~~faD~~p~llis~aSl~~Ln~~l~~~~~~~~~~v~~~RFRpNiVv~g~~~f~ED~W~~l~IG~~~~~~~~~C~R 743 (805)
T PLN02724 664 DDESRLSFANEGQFLLISEASVEDLNRRLATGQEDAKIRLDPTRFRPNLVVSGGEAYAEDEWQSLSIGDAEFTVLGGCNR 743 (805)
T ss_pred CcCCceeecCCCceEEecHHHHHHHHHHhccccccccCCCcHHHccceEEECCCCCccccCceEEEECCEEEEEecccCC
Confidence 224589999999999999999999999973 699999999999999999999999999999999999999999
Q ss_pred cccCeeeCCCCCC--CCChhHHHHHhhcccccCCCccccCccccceeeEEecccCCCCCCEEEeCCeEEEe
Q 021930 226 CKIPTINQDTGDA--GPEPNETLKQIRSDKVLRPGRKQRGKIYFGQNMVCKDNLTEGNGKVLKLGDPVFVL 294 (305)
Q Consensus 226 C~~~~vdp~tg~~--~~~pl~tL~~~R~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~g~~I~VGD~v~v~ 294 (305)
|+||||||+||++ +.|||+||++||+ ..++++||+|+++... ....| +|+|||.|++.
T Consensus 744 C~~~tvDp~tg~~~~~~epl~tL~~~R~---------~~~~~~FG~~~~~~~~-~~~~~-~i~vGd~v~~~ 803 (805)
T PLN02724 744 CQMINIDQETGLVNPSNEPLATLASYRR---------VKGKILFGILLRYEIS-DKRDQ-WIAVGSRVNPR 803 (805)
T ss_pred CCCCcCCcccCccCCCCChHHHHHHHhC---------cCCCCCccceeecccc-CCCCc-EEEeCCEEEec
Confidence 9999999999986 5799999999994 3478999999977311 12445 99999999874
|
|
| >COG3217 Uncharacterized Fe-S protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2362 consensus Uncharacterized Fe-S protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF03476 MOSC_N: MOSC N-terminal beta barrel domain; InterPro: IPR005303 This domain is found to the N terminus of MOSC domain (IPR005302 from INTERPRO) | Back alignment and domain information |
|---|
| >PF03473 MOSC: MOSC domain; InterPro: IPR005302 Molybdenum cofactor (MOCO) sulphurases [] catalyse the insertion of a terminal sulphur ligand into the molybdenum cofactor, thereby converting the oxo form of MOCO to a sulphurylated form | Back alignment and domain information |
|---|
| >KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
| >PRK14499 molybdenum cofactor biosynthesis protein MoaC/MOSC-domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK11536 6-N-hydroxylaminopurine resistance protein; Provisional | Back alignment and domain information |
|---|
| >COG2258 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 305 | ||||
| 2exn_A | 136 | Solution Structure For The Protein Coded By Gene Lo | 3e-04 |
| >pdb|2EXN|A Chain A, Solution Structure For The Protein Coded By Gene Locus Bb0938 Of Bordetella Bronchiseptica. Northeast Structural Genomics Target Bor11 Length = 136 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 305 | |||
| 2exn_A | 136 | Hypothetical protein BOR11; beta barrel containing | 4e-44 |
| >2exn_A Hypothetical protein BOR11; beta barrel containing fold, autostructure, autoassign, structure, structural genomics, PSI; NMR {Bordetella bronchiseptica} SCOP: b.165.1.1 Length = 136 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 4e-44
Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 23/149 (15%)
Query: 7 VKSIFVYPIKSCRGISVCQQAPLTPTGFRWDRQWMVINNNGRAYTQRNEPKLALVETELP 66
+ + PI C + + ++W+V N+ G+ + P+LA V EL
Sbjct: 1 MSTTAYQPIAECGATTQ-------SEAAAYQKRWLVANDAGQWLNRDLCPRLAEVSVELR 53
Query: 67 NEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRD---IADGVSVWEWCGSALAEGAEAS 123
+V++APGM L I L D + + V E + EG A+
Sbjct: 54 MGY------------LVLKAPGMLRLDIPLDVIEDDDSVRYQMLVGEQTVDVVDEGELAA 101
Query: 124 NWFTNYLGKPSRLVRYNAESETRPVDPKY 152
W +N+ G P R+++ + + P
Sbjct: 102 AWISNHAGVPCRILKVHPDM-AEVRWPSL 129
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 305 | |||
| 2exn_A | 136 | Hypothetical protein BOR11; beta barrel containing | 100.0 | |
| 1oru_A | 195 | YUAD protein; structural genomics, cytosolic hypot | 99.83 | |
| 1o65_A | 246 | Hypothetical protein YIIM; structural genomics, un | 99.33 |
| >2exn_A Hypothetical protein BOR11; beta barrel containing fold, autostructure, autoassign, structure, structural genomics, PSI; NMR {Bordetella bronchiseptica} SCOP: b.165.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=231.03 Aligned_cols=119 Identities=27% Similarity=0.496 Sum_probs=108.2
Q ss_pred EeeeeeecccCCCCeeeeceeeeeccccccCceeEEEecCCceeeecCCcceeEEEeecCCcccccCCCCCCCceEEEEe
Q 021930 7 VKSIFVYPIKSCRGISVCQQAPLTPTGFRWDRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRA 86 (305)
Q Consensus 7 V~~L~iyPVKS~~g~~v~~~~~l~~~Gl~~DR~~~l~d~~g~~lt~r~~p~L~~i~~~~~~~~~~~~~~~~~~~~l~l~~ 86 (305)
|++|||||||||+|++| +++. .|||+|||+|.+|+|+|||++|+|++|++.++. +.|+|++
T Consensus 1 v~~L~iYPIKSc~g~~l-~~a~------~~DR~wmlvd~~G~~lt~r~~P~Lali~~~~~~------------~~L~l~~ 61 (136)
T 2exn_A 1 MSTTAYQPIAECGATTQ-SEAA------AYQKRWLVANDAGQWLNRDLCPRLAEVSVELRM------------GYLVLKA 61 (136)
T ss_dssp CCCCCEEEETTTEEECC-GGGG------GTCCSEEEEETTSCEECTTTCGGGGCCEEEECS------------SEEEEEC
T ss_pred CceEEEeccccCCceec-CccC------ccCCcEEEEeCCCCEEEccCCccccEEEEEecC------------CEEEEEe
Confidence 57999999999999999 9987 999999999999999999999999999999963 4799999
Q ss_pred CCCCeEEEeccCCC---CCccceEEecccccccccchHHHHHHHHhhCCCeEEEEecCCCC
Q 021930 87 PGMQALKISLSKPR---DIADGVSVWEWCGSALAEGAEASNWFTNYLGKPSRLVRYNAESE 144 (305)
Q Consensus 87 p~~~~l~v~l~~~~---~~~~~~~v~~~~~~~~d~g~~~~~wlS~~lg~~~rL~~~~~~~~ 144 (305)
||++++.|++.+.. .....++||++.+++++||+++++|||++||+||||++++++..
T Consensus 62 pg~~~l~vpl~~~~~~~~~~~~v~vw~~~~~a~d~g~~~~~W~S~~Lg~p~rLv~~~~~~~ 122 (136)
T 2exn_A 62 PGMLRLDIPLDVIEDDDSVRYQMLVGEQTVDVVDEGELAAAWISNHAGVPCRILKVHPDMA 122 (136)
T ss_dssp SSSCEEEEESSCCCSSCSCEEEEEETTEEEEEEECCHHHHHHHHHHTCSSEEEEEECTTTC
T ss_pred CCCceEEEECCCccccccCceeEEEeCCcceeEeccHHHHHHHHHHhCCCeEEEEcCCCCc
Confidence 99999999997653 13457899999999999999999999999999999999987654
|
| >1oru_A YUAD protein; structural genomics, cytosolic hypothetical protein, PSI, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.80A {Bacillus subtilis} SCOP: b.58.1.2 | Back alignment and structure |
|---|
| >1o65_A Hypothetical protein YIIM; structural genomics, unknown function; 2.33A {Escherichia coli} SCOP: b.58.1.2 PDB: 1o67_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 305 | ||||
| d2exna1 | 128 | b.165.1.1 (A:1-128) Hypothetical protein BB0938 {B | 1e-35 | |
| d1orua_ | 182 | b.58.1.2 (A:) Hypothetical protein YuaD {Bacillus | 0.004 |
| >d2exna1 b.165.1.1 (A:1-128) Hypothetical protein BB0938 {Bordetella bronchiseptica [TaxId: 518]} Length = 128 | Back information, alignment and structure |
|---|
class: All beta proteins fold: MOSC N-terminal domain-like superfamily: MOSC N-terminal domain-like family: MOSC N-terminal domain-like domain: Hypothetical protein BB0938 species: Bordetella bronchiseptica [TaxId: 518]
Score = 123 bits (309), Expect = 1e-35
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 22/143 (15%)
Query: 7 VKSIFVYPIKSCRGISVCQQAPLTPTGFRWDRQWMVINNNGRAYTQRNEPKLALVETELP 66
+ + PI C + + ++W+V N+ G+ + P+LA V EL
Sbjct: 1 MSTTAYQPIAECGATTQ-------SEAAAYQKRWLVANDAGQWLNRDLCPRLAEVSVELR 53
Query: 67 NEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRD---IADGVSVWEWCGSALAEGAEAS 123
+V++APGM L I L D + + V E + EG A+
Sbjct: 54 MGY------------LVLKAPGMLRLDIPLDVIEDDDSVRYQMLVGEQTVDVVDEGELAA 101
Query: 124 NWFTNYLGKPSRLVRYNAESETR 146
W +N+ G P R+++ + +
Sbjct: 102 AWISNHAGVPCRILKVHPDMAEV 124
|
| >d1orua_ b.58.1.2 (A:) Hypothetical protein YuaD {Bacillus subtilis [TaxId: 1423]} Length = 182 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 305 | |||
| d2exna1 | 128 | Hypothetical protein BB0938 {Bordetella bronchisep | 100.0 | |
| d1orua_ | 182 | Hypothetical protein YuaD {Bacillus subtilis [TaxI | 99.6 | |
| d1o65a_ | 233 | Hypothetical protein YiiM {Escherichia coli [TaxId | 98.81 |
| >d2exna1 b.165.1.1 (A:1-128) Hypothetical protein BB0938 {Bordetella bronchiseptica [TaxId: 518]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: MOSC N-terminal domain-like superfamily: MOSC N-terminal domain-like family: MOSC N-terminal domain-like domain: Hypothetical protein BB0938 species: Bordetella bronchiseptica [TaxId: 518]
Probab=100.00 E-value=1.7e-34 Score=234.02 Aligned_cols=119 Identities=27% Similarity=0.495 Sum_probs=107.3
Q ss_pred EeeeeeecccCCCCeeeeceeeeeccccccCceeEEEecCCceeeecCCcceeEEEeecCCcccccCCCCCCCceEEEEe
Q 021930 7 VKSIFVYPIKSCRGISVCQQAPLTPTGFRWDRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRA 86 (305)
Q Consensus 7 V~~L~iyPVKS~~g~~v~~~~~l~~~Gl~~DR~~~l~d~~g~~lt~r~~p~L~~i~~~~~~~~~~~~~~~~~~~~l~l~~ 86 (305)
|+.|++||||||+|+++ ++ ||.|||+|||+|++|+|+|||++|+|++|++.++. +.|+|++
T Consensus 1 ~s~~~~~PIKsc~g~~~-~~------gl~~DR~wmlvd~~G~fltqR~~P~La~i~~~~~~------------~~L~l~~ 61 (128)
T d2exna1 1 MSTTAYQPIAECGATTQ-SE------AAAYQKRWLVANDAGQWLNRDLCPRLAEVSVELRM------------GYLVLKA 61 (128)
T ss_dssp CCCCCEEEETTTEEECC-GG------GGGTCCSEEEEETTSCEECTTTCGGGGCCEEEECS------------SEEEEEC
T ss_pred CcceeeecccccCCccc-cc------hhhhceeEEEECCCCCEEEcccCCcEEEEEEEEeC------------CEEEEEe
Confidence 57899999999999999 74 89999999999999999999999999999999863 5799999
Q ss_pred CCCCeEEEeccCCCC---CccceEEecccccccccchHHHHHHHHhhCCCeEEEEecCCCC
Q 021930 87 PGMQALKISLSKPRD---IADGVSVWEWCGSALAEGAEASNWFTNYLGKPSRLVRYNAESE 144 (305)
Q Consensus 87 p~~~~l~v~l~~~~~---~~~~~~v~~~~~~~~d~g~~~~~wlS~~lg~~~rL~~~~~~~~ 144 (305)
||++++.|+|..... ....+.+|++.+++++||+++++|||++||++|||+++.|+..
T Consensus 62 pg~~~l~vpL~~~~~~~~~~~~v~vw~~~~~a~~~g~~~~~WfS~~LG~~~rLv~~~p~~~ 122 (128)
T d2exna1 62 PGMLRLDIPLDVIEDDDSVRYQMLVGEQTVDVVDEGELAAAWISNHAGVPCRILKVHPDMA 122 (128)
T ss_dssp SSSCEEEEESSCCCSSCSCEEEEEETTEEEEEEECCHHHHHHHHHHTCSSEEEEEECTTTC
T ss_pred cCCCceeeccccccccccceEEEEEcCCeeEEEECChHHHHHHHHHhCCceEEEEECCCCC
Confidence 999999999965432 2357889999999999999999999999999999999987653
|
| >d1orua_ b.58.1.2 (A:) Hypothetical protein YuaD {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1o65a_ b.58.1.2 (A:) Hypothetical protein YiiM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|