Citrus Sinensis ID: 021942

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-----
Protein Sequence
MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEEVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPPEILPRPAVRALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIYDKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccHHHHHHHHccccccccccEEEEcccccccccccccccccccccccccccccccHHcccccccEEEccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHcHcccccccccccccccccccccccccccccccEEEEcccccHHHHHHHHccccccccHHHHccccccEcccccccccccccccccccccccEEEEEccccccEEEEEcccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHcccccccccccccccEEEEEEccccccccccccccccEEcccEccccHHHHHccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccEEEEc
Coil and Loop (DISEMBL)
merstpvrkphtstadllvwsetppsdspaqasstrssvrgqpsdgiskvvfggqvtDEEVEslnrrkpcsgykmkemtgsgifaagaendesesgsanptpnnktgLRMYQQAIAGIshisfgeedsispkkpttlpevakqrelsgtlesESEAKLKKQISDAkskelsghdifapppeilprpAVRALALKenfnlgdsapqdvqtsvgvltpagdqssissteepvmktSKKIYDKkfselsgndifkgdvppssaekplSVAKLREMsgsnifadgkvesrdylggvrkppggessialv
Flexible Loop (DISEMBL)
merstpvrkphtstadllvwsetppsdspaqasstrssvrgqpsdgiskvvfggqvtdeeveslnrrkpcsgykmKEMTGSGIFAAGaendesesgsanpTPNNKTGLRMYQQAIAGISHISfgeedsispkkpttlpevakqrelsgtleseseaKLKKQISDAKSKELSGHDIFAPPPEILPRPAVRALALKENFNLGDSAPQDVQTSVGVLtpagdqssissteepvmktSKKIYDKkfselsgndifkgdvppssaEKPLSVAKLREmsgsnifadgkvesrdylggvrkppggessialv
Low Complexity Region (SEG)
MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEEVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPPEILPRPAVRALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIYDKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV
Disordered region (IsUnstruct)
**************************************************************************************************************YQQAIAGISH*****************************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
*****PV*KPHTSTADLLV**********************************************************MTGSGIFA***********************RMYQQAIAGI********************************************************IFA*******************************************************************LSG*****************************IFAD*********************IALV
Disordered Region (DISEMBL)
*************TADLLVWSE*********************SDGISKVVFGGQVTDEEVESLNRRKPCSGYKMKEMTGSGIFAAGA************TPNNKTGLRMYQQAIAGISHISFGEEDSISPKKP**********************************ELSGHDIFAPPPEILPRPAVRALALKENFNLGDSAPQDVQTSVGVLTP***************KTSKKIYDKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKP**********
Disordered Region (DISPRO)
*********************************************GISKVVFGGQVTDEEVESLNRRKPCSGYKMKEMTG*GIF********************KTGLRMYQQAIAGISHISFGEEDSISPKKPTTLPEVAK*R******ESESEAK*KKQISDAKSKELSGHDIFAPPPEILPRPAVRALAL***************TSVGVLTPAGDQSSISSTEEPVMKTSKKIYDKKFSELSGNDIFK************************************LGGVRKPPGGESSI*L*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEEVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPPEILPRPAVRALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIYDKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	305
224063217	294	predicted protein [Populus trichocarpa]	0.960	0.996	0.797	1e-134
255545698	1204	conserved hypothetical protein [Ricinus	0.957	0.242	0.795	1e-132
224084676	294	predicted protein [Populus trichocarpa]	0.960	0.996	0.787	1e-130
225459322	304	PREDICTED: uncharacterized protein LOC10	0.990	0.993	0.765	1e-129
225459324	295	PREDICTED: uncharacterized protein LOC10	0.960	0.993	0.749	1e-124
225459326	286	PREDICTED: uncharacterized protein LOC10	0.931	0.993	0.736	1e-121
449450494	291	PREDICTED: uncharacterized protein LOC10	0.944	0.989	0.730	1e-119
358249210	280	uncharacterized protein LOC100818758 [Gl	0.914	0.996	0.738	1e-114
388510830	288	unknown [Medicago truncatula]	0.937	0.993	0.726	1e-114
217073902	288	unknown [Medicago truncatula]	0.937	0.993	0.729	1e-114

>gi|224063217|ref|XP_002301046.1| predicted protein [Populus trichocarpa] gi|118481505|gb|ABK92695.1| unknown [Populus trichocarpa] gi|222842772|gb|EEE80319.1| predicted protein [Populus trichocarpa]

 Score =  482 bits (1240), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 244/306 (79%), Positives = 271/306 (88%), Gaps = 13/306 (4%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEE 60
           MERSTPVRKPHTSTADLL WSETPP DSPA  S++RS+   QPSDGISKVVFGGQVT+EE
Sbjct: 1   MERSTPVRKPHTSTADLLTWSETPPPDSPAVGSASRSTRPHQPSDGISKVVFGGQVTEEE 60

Query: 61  VESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISH 120
            ESLN+RKPCSGYKMKEMTGSGIFAA  END +ESGSANPT N+KTGLRMYQQAIAGISH
Sbjct: 61  FESLNKRKPCSGYKMKEMTGSGIFAANGENDLAESGSANPTANSKTGLRMYQQAIAGISH 120

Query: 121 ISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPP 180
           ISF EE+S+SPKKPTTLPEVAKQRELSGTLESES+A LKKQIS AKSKELSGHDIFAPPP
Sbjct: 121 ISFAEEESVSPKKPTTLPEVAKQRELSGTLESESDAMLKKQISTAKSKELSGHDIFAPPP 180

Query: 181 EILPRP-AVRALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIYD 239
           EILPRP  VRALAL+E+  LG+ +P++         PAGDQ    S+EE V+KT+KKIY+
Sbjct: 181 EILPRPTTVRALALQESIQLGEPSPRN---------PAGDQ---MSSEESVVKTAKKIYN 228

Query: 240 KKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGE 299
           +KF+ELSGN++FKGD PPS+AEKPLSVAKLREMSGS+IF+DGKVESRDYLGGVRKPPGGE
Sbjct: 229 QKFNELSGNNVFKGDAPPSTAEKPLSVAKLREMSGSDIFSDGKVESRDYLGGVRKPPGGE 288

Query: 300 SSIALV 305
           SSIALV
Sbjct: 289 SSIALV 294

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545698|ref|XP_002513909.1| conserved hypothetical protein [Ricinus communis] gi|223546995|gb|EEF48492.1| conserved hypothetical protein [Ricinus communis]

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/308 (79%), Positives = 265/308 (86%), Gaps = 16/308 (5%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRG-QPSDGISKVVFGGQVTDE 59
           MER+TPVRKPHTSTADLL WSE PP+DSPA  S+ RS+ R  QPSDGISKVVFGGQVTDE
Sbjct: 1   MERTTPVRKPHTSTADLLTWSEIPPADSPAVGSAPRSAARSHQPSDGISKVVFGGQVTDE 60

Query: 60  EVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGIS 119
           E E+LN+RKPCSGYKMKEMTGSGIF A  END SESG AN TPN++TGLRMYQQA+AGIS
Sbjct: 61  EAENLNKRKPCSGYKMKEMTGSGIFVANGENDPSESGGANATPNSRTGLRMYQQALAGIS 120

Query: 120 HISFGEEDSISPKKPTTLPEVAKQRELSGTLESES--EAKLKKQISDAKSKELSGHDIFA 177
           HISF EE+S+SPKKPTTLPEVAKQRELSGTLESE+  EAKLKKQ+SDAK KELSGHDIFA
Sbjct: 121 HISFAEEESVSPKKPTTLPEVAKQRELSGTLESEAEREAKLKKQLSDAKCKELSGHDIFA 180

Query: 178 PPPEILPRP-AVRALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKK 236
           PPPEILPRP  VRALALKE+  LG+ AP D         PAG Q    ST EPVMKT+KK
Sbjct: 181 PPPEILPRPTTVRALALKESIELGEPAPHD---------PAGGQ---LSTGEPVMKTAKK 228

Query: 237 IYDKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPP 296
           IYDKKF+ELSGNDIFKGDVPPSSAEK LSVAKLRE+SG++IFADGK E RDYLGGVRKPP
Sbjct: 229 IYDKKFNELSGNDIFKGDVPPSSAEKSLSVAKLREISGNDIFADGKAEHRDYLGGVRKPP 288

Query: 297 GGESSIAL 304
           GGESSIAL
Sbjct: 289 GGESSIAL 296

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084676|ref|XP_002307384.1| predicted protein [Populus trichocarpa] gi|222856833|gb|EEE94380.1| predicted protein [Populus trichocarpa]

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 241/306 (78%), Positives = 265/306 (86%), Gaps = 13/306 (4%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEE 60
           MERSTPVRKPHTSTADLL WSETPP DSP+  S+ R +   QPSDGISKVVFGGQVT+EE
Sbjct: 1   MERSTPVRKPHTSTADLLTWSETPPPDSPSVGSAPRPTRSHQPSDGISKVVFGGQVTEEE 60

Query: 61  VESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISH 120
            ESLN+RKPCSGYKMKEMTGSGIFAA  E+D +ESGSANP PN+KTGLRMYQQAIAGISH
Sbjct: 61  FESLNKRKPCSGYKMKEMTGSGIFAANGEDDTAESGSANPIPNSKTGLRMYQQAIAGISH 120

Query: 121 ISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPP 180
           ISF E+DS+SPKKPTTLPEVAKQRELSGTLESES+AKLKKQIS AKSKELSGHDIFAPPP
Sbjct: 121 ISFAEDDSVSPKKPTTLPEVAKQRELSGTLESESDAKLKKQISGAKSKELSGHDIFAPPP 180

Query: 181 EILPRP-AVRALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIYD 239
           EILPRP  VRALAL+E+  LG+ +P D         P G Q     +EE V+KT+KKI +
Sbjct: 181 EILPRPTTVRALALQESIQLGEPSPHD---------PVGGQ---QPSEESVVKTAKKINN 228

Query: 240 KKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGE 299
           +KF+ELSGNDIFKGD PPSSAEKPLSVAKLREMSG++IFADGKVESRD+LGGVRKPPGGE
Sbjct: 229 QKFNELSGNDIFKGDAPPSSAEKPLSVAKLREMSGNDIFADGKVESRDFLGGVRKPPGGE 288

Query: 300 SSIALV 305
           SSIALV
Sbjct: 289 SSIALV 294

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459322|ref|XP_002285797.1| PREDICTED: uncharacterized protein LOC100260886 isoform 2 [Vitis vinifera]

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 235/307 (76%), Positives = 271/307 (88%), Gaps = 5/307 (1%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRG-QPSDGISKVVFGGQVTDE 59
           ME++TPVRKPHTSTADLL WSETPP+DSPA AS  R +VR  QPSDGISKVVFGGQVTDE
Sbjct: 1   MEKATPVRKPHTSTADLLTWSETPPADSPASAS--RPAVRSHQPSDGISKVVFGGQVTDE 58

Query: 60  EVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGIS 119
           E E+L++RKPCSGYK+KE+TGSGIFA   EN  SESGSANPTPNNKT +R+YQQA A IS
Sbjct: 59  EAEALSKRKPCSGYKLKEITGSGIFALEGENGTSESGSANPTPNNKTTVRIYQQAAAAIS 118

Query: 120 HISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPP 179
            ISFG E+S+SPKKPTTLPEVAKQRELSGTLESE E K++KQ+SDAK KELSGHDIFAPP
Sbjct: 119 QISFGTEESVSPKKPTTLPEVAKQRELSGTLESE-ETKMQKQLSDAKCKELSGHDIFAPP 177

Query: 180 PEILPRP-AVRALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIY 238
           PEILPRP A R+L LKE+ ++G+ AP++V+TSV V  PAG QS+I  ++E V+KT+KKI+
Sbjct: 178 PEILPRPSAARSLVLKESKDMGEPAPRNVRTSVKVSNPAGGQSNIMFSDETVLKTAKKIH 237

Query: 239 DKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGG 298
           ++KF EL+GNDIFKGDVPPSSAEK LS+AKLREMSG++IFADGK ESRDYLGGVRKPPGG
Sbjct: 238 NQKFVELTGNDIFKGDVPPSSAEKSLSMAKLREMSGNDIFADGKAESRDYLGGVRKPPGG 297

Query: 299 ESSIALV 305
           ESSIALV
Sbjct: 298 ESSIALV 304

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459324|ref|XP_002285796.1| PREDICTED: uncharacterized protein LOC100260886 isoform 1 [Vitis vinifera] gi|147861247|emb|CAN81471.1| hypothetical protein VITISV_020507 [Vitis vinifera] gi|302141947|emb|CBI19150.3| unnamed protein product [Vitis vinifera]

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 230/307 (74%), Positives = 265/307 (86%), Gaps = 14/307 (4%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRG-QPSDGISKVVFGGQVTDE 59
           ME++TPVRKPHTSTADLL WSETPP+DSPA AS  R +VR  QPSDGISKVVFGGQVTDE
Sbjct: 1   MEKATPVRKPHTSTADLLTWSETPPADSPASAS--RPAVRSHQPSDGISKVVFGGQVTDE 58

Query: 60  EVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGIS 119
           E E+L++RKPCSGYK+KE+TGSGIFA   EN  SESGSANPTPNNKT +R+YQQA A IS
Sbjct: 59  EAEALSKRKPCSGYKLKEITGSGIFALEGENGTSESGSANPTPNNKTTVRIYQQAAAAIS 118

Query: 120 HISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPP 179
            ISFG E+S+SPKKPTTLPEVAKQRELSGTLESE E K++KQ+SDAK KELSGHDIFAPP
Sbjct: 119 QISFGTEESVSPKKPTTLPEVAKQRELSGTLESE-ETKMQKQLSDAKCKELSGHDIFAPP 177

Query: 180 PEILPRP-AVRALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIY 238
           PEILPRP A R+L LKE+ ++G+ AP++         PAG QS+I  ++E V+KT+KKI+
Sbjct: 178 PEILPRPSAARSLVLKESKDMGEPAPRN---------PAGGQSNIMFSDETVLKTAKKIH 228

Query: 239 DKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGG 298
           ++KF EL+GNDIFKGDVPPSSAEK LS+AKLREMSG++IFADGK ESRDYLGGVRKPPGG
Sbjct: 229 NQKFVELTGNDIFKGDVPPSSAEKSLSMAKLREMSGNDIFADGKAESRDYLGGVRKPPGG 288

Query: 299 ESSIALV 305
           ESSIALV
Sbjct: 289 ESSIALV 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459326|ref|XP_002285798.1| PREDICTED: uncharacterized protein LOC100260886 isoform 3 [Vitis vinifera]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/307 (73%), Positives = 259/307 (84%), Gaps = 23/307 (7%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRG-QPSDGISKVVFGGQVTDE 59
           ME++TPVRKPHTSTADLL WSETPP+DSPA AS  R +VR  QPSDGISKVVFGGQVTDE
Sbjct: 1   MEKATPVRKPHTSTADLLTWSETPPADSPASAS--RPAVRSHQPSDGISKVVFGGQVTDE 58

Query: 60  EVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGIS 119
           E E+L++RKPCSGYK+KE+TGSGIFA   EN  SESGSANPTPNNKT +R+YQQA A IS
Sbjct: 59  EAEALSKRKPCSGYKLKEITGSGIFALEGENGTSESGSANPTPNNKTTVRIYQQAAAAIS 118

Query: 120 HISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPP 179
            ISFG E+S+SPKKPTTLPEVAKQRELSGTLESE E K++KQ+SDAK KELSGHDIFAPP
Sbjct: 119 QISFGTEESVSPKKPTTLPEVAKQRELSGTLESE-ETKMQKQLSDAKCKELSGHDIFAPP 177

Query: 180 PEILPRP-AVRALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIY 238
           PEILPRP A R+L LKE+ ++G+ AP++V+TS                   V+KT+KKI+
Sbjct: 178 PEILPRPSAARSLVLKESKDMGEPAPRNVRTST------------------VLKTAKKIH 219

Query: 239 DKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGG 298
           ++KF EL+GNDIFKGDVPPSSAEK LS+AKLREMSG++IFADGK ESRDYLGGVRKPPGG
Sbjct: 220 NQKFVELTGNDIFKGDVPPSSAEKSLSMAKLREMSGNDIFADGKAESRDYLGGVRKPPGG 279

Query: 299 ESSIALV 305
           ESSIALV
Sbjct: 280 ESSIALV 286

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450494|ref|XP_004142997.1| PREDICTED: uncharacterized protein LOC101215119 [Cucumis sativus] gi|449531599|ref|XP_004172773.1| PREDICTED: uncharacterized protein LOC101227622 [Cucumis sativus]

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/308 (73%), Positives = 251/308 (81%), Gaps = 20/308 (6%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPA--QASSTRSSVRGQPSDGISKVVFGGQVTD 58
           M+R+TPVRKPHTSTADLL W E PP+DSPA   ++S  +    QPSDGISKVVFGGQVTD
Sbjct: 1   MDRTTPVRKPHTSTADLLTWPELPPADSPALPSSASRSAPRSHQPSDGISKVVFGGQVTD 60

Query: 59  EEVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGI 118
           EEVESLN+RKPCSGYKMKEMTGSGIF     ++E ESGSANP+  NKTG+RMYQQ +AGI
Sbjct: 61  EEVESLNKRKPCSGYKMKEMTGSGIFVGNEGDEELESGSANPS-QNKTGIRMYQQTLAGI 119

Query: 119 SHISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAP 178
           SHISFGEE S+SPKKPTT+PEVAKQRELSG LES+++AKLKKQ+SDAK KELSGHDIFAP
Sbjct: 120 SHISFGEEGSVSPKKPTTVPEVAKQRELSGNLESDADAKLKKQLSDAKCKELSGHDIFAP 179

Query: 179 PPEILPRPAV-RALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKI 237
           PPEILPRP   R L LK +  +G+                 D   I   EEP +KT+KKI
Sbjct: 180 PPEILPRPTTARTLDLKGSIEIGEP----------------DSRGIIPGEEPSVKTAKKI 223

Query: 238 YDKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPG 297
           YDKKFSELSGNDIFKGDVPPSS EKPLSVAKLREMSG++IFADGKVE+RDYLGGVRKPPG
Sbjct: 224 YDKKFSELSGNDIFKGDVPPSSTEKPLSVAKLREMSGNDIFADGKVETRDYLGGVRKPPG 283

Query: 298 GESSIALV 305
           GESSIALV
Sbjct: 284 GESSIALV 291

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249210|ref|NP_001240011.1| uncharacterized protein LOC100818758 [Glycine max] gi|255642413|gb|ACU21470.1| unknown [Glycine max]

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/306 (73%), Positives = 244/306 (79%), Gaps = 27/306 (8%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEE 60
           MERS PVRKPHTSTADLL W ETP SDSPA  SS   S   QPSDGI KVVFGGQVTDEE
Sbjct: 1   MERSNPVRKPHTSTADLLTWPETPISDSPAPPSSAVRS--HQPSDGIRKVVFGGQVTDEE 58

Query: 61  VESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISH 120
           VESLN+RKPCS YKMKE+TGSGIF A  E+D SE+GS NP   NKTG+RMYQQAI+GISH
Sbjct: 59  VESLNKRKPCSDYKMKEITGSGIFVANGEDDASEAGSDNP---NKTGVRMYQQAISGISH 115

Query: 121 ISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPP 180
           ISFGEE+S+SPKKPTTLPEVAKQRELSGTLESE ++ LKKQ+SDAK KELSGHDIFAPPP
Sbjct: 116 ISFGEEESVSPKKPTTLPEVAKQRELSGTLESE-DSILKKQLSDAKCKELSGHDIFAPPP 174

Query: 181 EILPRPAV-RALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIYD 239
           EI PRP   R L LK + ++ D                GDQ   +S      KT+KKIYD
Sbjct: 175 EIKPRPITPRILELKGSIDIAD----------------GDQGDTNS----AGKTAKKIYD 214

Query: 240 KKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGE 299
           KKF+ELSGNDIFKGD PPSSAEK LS AKLREMSGSNIFADGKVE+RDYLGGVRKPPGGE
Sbjct: 215 KKFAELSGNDIFKGDAPPSSAEKSLSGAKLREMSGSNIFADGKVEARDYLGGVRKPPGGE 274

Query: 300 SSIALV 305
           SSIALV
Sbjct: 275 SSIALV 280

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510830|gb|AFK43481.1| unknown [Medicago truncatula]

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/307 (72%), Positives = 250/307 (81%), Gaps = 21/307 (6%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASS-TRSSVRGQPSDGISKVVFGGQVTDE 59
           MER+TPVRKPHTSTADLLVWSETP +DSPA  SS TRS    QPSDGISKVVFGGQVTDE
Sbjct: 1   MERNTPVRKPHTSTADLLVWSETPINDSPAPPSSNTRSH---QPSDGISKVVFGGQVTDE 57

Query: 60  EVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGIS 119
           EVESLN+RKPCS YKMKE+TGSGIF A  E++  E GSANP+ N KTG+RMYQQAIAGIS
Sbjct: 58  EVESLNKRKPCSEYKMKEITGSGIFVANGEDEAPEDGSANPSAN-KTGIRMYQQAIAGIS 116

Query: 120 HISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPP 179
           HISFGEE+S+SPKKP +LPEVAKQRELSGT+ESE + KL KQ+SDAK KELSGHDIFAPP
Sbjct: 117 HISFGEEESVSPKKPASLPEVAKQRELSGTMESE-DNKLNKQLSDAKCKELSGHDIFAPP 175

Query: 180 PEILPRPAV-RALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIY 238
           PE+ PRP   R L LK +  LG+S               GD    ++T EPV+KT+KKI 
Sbjct: 176 PEVKPRPITPRILELKGSIGLGESH--------------GDGDQDATTGEPVLKTAKKIL 221

Query: 239 DKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGG 298
           ++KF+ELSGN+IFKGD PP +AEK LS AKLRE+SGSNIFADGK ESRDYLGGVRKPPGG
Sbjct: 222 NQKFAELSGNNIFKGDSPPLAAEKSLSGAKLREISGSNIFADGKAESRDYLGGVRKPPGG 281

Query: 299 ESSIALV 305
           ESSIALV
Sbjct: 282 ESSIALV 288

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217073902|gb|ACJ85311.1| unknown [Medicago truncatula]

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/307 (72%), Positives = 249/307 (81%), Gaps = 21/307 (6%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASS-TRSSVRGQPSDGISKVVFGGQVTDE 59
           MERSTPVRKPHTSTADLLVWSETP +DSPA  SS TRS    QPSDGISKVVFGGQVTDE
Sbjct: 1   MERSTPVRKPHTSTADLLVWSETPINDSPAPPSSNTRSH---QPSDGISKVVFGGQVTDE 57

Query: 60  EVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGIS 119
           EVESLN+RKPCS YKMKE+TGSGIF A  E++  E GSANP+ N KTG+RMYQQAIAGIS
Sbjct: 58  EVESLNKRKPCSEYKMKEITGSGIFVANGEDEAPEDGSANPSAN-KTGIRMYQQAIAGIS 116

Query: 120 HISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPP 179
           HISFGEE+S+SPKKP +LPEVAKQRELSGT+ESE + KL KQ+SDAK KELSGHDIFAPP
Sbjct: 117 HISFGEEESVSPKKPASLPEVAKQRELSGTMESE-DNKLNKQLSDAKCKELSGHDIFAPP 175

Query: 180 PEILPRPAV-RALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIY 238
           PEI PRP   R L LK               S+G+    GD    ++T EPV+KT+KKI 
Sbjct: 176 PEIKPRPITPRILELK--------------GSIGLRESHGDGDQDATTGEPVLKTAKKIL 221

Query: 239 DKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGG 298
           ++KF+ELSGN+IFKGD PP +AEK LS AKLRE+SGSNIFADGK ESRDYLGGVRKPPGG
Sbjct: 222 NQKFAELSGNNIFKGDSPPLAAEKSLSGAKLREISGSNIFADGKAESRDYLGGVRKPPGG 281

Query: 299 ESSIALV 305
           ESSIALV
Sbjct: 282 ESSIALV 288

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	305
TAIR|locus:2140000	299	AT4G39860 "AT4G39860" [Arabido	0.973	0.993	0.631	2.3e-94
TAIR|locus:2011375	286	AT1G35780 "AT1G35780" [Arabido	0.813	0.867	0.610	4.6e-73
TAIR|locus:2060425	328	AT2G22270 "AT2G22270" [Arabido	0.714	0.664	0.482	2.2e-43
UNIPROTKB|E1BQ40	992	MLIP "Uncharacterized protein"	0.455	0.140	0.273	5.8e-05
TAIR|locus:2060430	314	ALKBH2 "homolog of E. coli alk	0.180	0.175	0.466	7e-05

TAIR|locus:2140000 AT4G39860 "AT4G39860" [Arabidopsis thaliana (taxid:3702)]

 Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
 Identities = 194/307 (63%), Positives = 236/307 (76%)

Query:     1 MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEE 60
             MER+TPVR PHTSTADLL WSETPP    +  S+ RS    QPSDGISK++ GGQ+TDEE
Sbjct:     1 MERNTPVRNPHTSTADLLSWSETPPPPHHSTPSAARSH---QPSDGISKILGGGQITDEE 57

Query:    61 VESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGS-ANPTPNNKTGLRMYQQAIAGIS 119
              +SLN+ K CSGYK+KEMTGSGIF      D+ + GS ++ T + KTGLR YQQ + G+S
Sbjct:    58 AQSLNKLKNCSGYKLKEMTGSGIFT-----DKGKVGSESDATTDPKTGLRYYQQTLNGMS 112

Query:   120 HISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPP 179
              ISF  + ++SPKKPTTL EVAKQRELSG L +E++ K  KQIS AK +E+SGHDIFAPP
Sbjct:   113 QISFSADGNVSPKKPTTLTEVAKQRELSGNLLTEADLKSNKQISSAKIEEISGHDIFAPP 172

Query:   180 PEILPRPAVRALA-LKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIY 238
              EI PR  V A    + N ++G+ AP++++TSV V  PAG QS+I  +EEPV+KTSKKI+
Sbjct:   173 SEIQPRSLVAAQQEARGNRDMGEPAPRNLRTSVKVSNPAGGQSNILFSEEPVVKTSKKIH 232

Query:   239 DKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGG 298
             ++KF EL+GN IFKGD  P SA+K LS AKLREMSG+NIFADGK ESRDY GGVRKPPGG
Sbjct:   233 NQKFQELTGNGIFKGDESPGSADKQLSSAKLREMSGNNIFADGKSESRDYFGGVRKPPGG 292

Query:   299 ESSIALV 305
             ESSI+LV
Sbjct:   293 ESSISLV 299

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0000280 "nuclear division" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006342 "chromatin silencing" evidence=RCA

GO:0007000 "nucleolus organization" evidence=RCA

GO:0008283 "cell proliferation" evidence=RCA

GO:0016572 "histone phosphorylation" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2011375 AT1G35780 "AT1G35780" [Arabidopsis thaliana (taxid:3702)]

 Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
 Identities = 160/262 (61%), Positives = 192/262 (73%)

Query:     1 MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRG-QPSDGISKVVFGGQVTDE 59
             ME++TPVRKPH STADLL W E  P +SPA  SS RS+ R  QPSDGISKVVFGGQVTDE
Sbjct:     1 MEKNTPVRKPHMSTADLLTWPENQPFESPAAVSS-RSAARSHQPSDGISKVVFGGQVTDE 59

Query:    60 EVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGI- 118
             EVESLN+RKPCS YKMKE+TGSGIF+   END+SE  SAN   N K+  R +QQ  A I 
Sbjct:    60 EVESLNKRKPCSNYKMKEITGSGIFSVYEENDDSELASANSATNGKS--RTFQQPPAAIM 117

Query:   119 SHISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAP 178
             SHISFGEE+ ++PKKP T+PEVAKQRELSGTLE +S+AKL KQ SDAK KELSGH+IFAP
Sbjct:   118 SHISFGEEEIVTPKKPATVPEVAKQRELSGTLEYQSDAKLNKQFSDAKCKELSGHNIFAP 177

Query:   179 PPEILPRPAVRALALKENFNLG--DSAPQ-DVQTSVGV----LTP-AGDQSSISSTEEPV 230
             PPEI  RP VRALA K+NF+LG  D+ P  +++T+  +     T  +G+    S    P 
Sbjct:   178 PPEIKLRPTVRALAYKDNFDLGESDTKPDGELKTAKKIADRKFTDLSGNNVFKSDVSSPS 237

Query:   231 MKTSKKIYDK-KFSELSGNDIF 251
               T++++    K  E+SGNDIF
Sbjct:   238 SATAERLLSTAKLKEISGNDIF 259

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2060425 AT2G22270 "AT2G22270" [Arabidopsis thaliana (taxid:3702)]

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 112/232 (48%), Positives = 149/232 (64%)

Query:    81 SGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKKPTTLPEV 140
             S I  +G EN  +     +  PN++T +  +Q      S ISF  E++++PKKPTTL E 
Sbjct:   104 SQISFSGEENATTPMNGKDD-PNHQTRIHYHQDQR---SQISFSGEENVTPKKPTTLNEA 159

Query:   141 AKQRELSGTLESESEAKLKK-QISDAKSKELSGHDIFAPPPEILPRPAVRALA---LKEN 196
             AKQ+ELS T+E+++++K KK QIS+ K+K +SGHDIFA P E  PR          +K N
Sbjct:   160 AKQKELSRTVETQADSKCKKKQISNTKNKAMSGHDIFASP-ESQPRRLFGGATQSEVKGN 218

Query:   197 FNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIYDKK--FSELSGNDIFKGD 254
              N  +SAP+  + SV   T  G  S+   +EE V+K+SKKI+++K  F  L+ N IFK D
Sbjct:   219 KNTEESAPRSSRASVK--TSNGQSSNRLFSEEHVVKSSKKIHNQKSQFQGLTSNGIFKSD 276

Query:   255 -VPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV 305
              +PP  +EK  S AK REMSG NIFADGK E RDY GG R+PPGGESSI+LV
Sbjct:   277 KIPPGYSEKMQSSAKKREMSGHNIFADGKSEYRDYYGGARRPPGGESSISLV 328

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E1BQ40 MLIP "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 95 (38.5 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
 Identities = 43/157 (27%), Positives = 69/157 (43%)

Query:   122 SFGEEDSISPKKPTTLPEVAKQR--ELSGTLESESEAKLKKQISDAKSKELS---GHDIF 176
             S  ++ ++ P      P   +Q+  EL  T++   +  L    SD+ S  L    G D  
Sbjct:   770 SISKDSTLDPPLELCSPAQLRQQTEELCATIDKVLQDSLSMHSSDSPSSSLQTFLGSDTI 829

Query:   177 APPPEILPRPAVRALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKK 236
               P   LPR A R        +   + P+   T  GV+ PA  +S I      ++K  ++
Sbjct:   830 KMPTT-LPRAAGRETKYANLSSPSSTVPESQLTKPGVIRPAPVKSKI------LLKKEEE 882

Query:   237 IYDKK-FSE-LSGN-DIF-KGDVPPSSAEKPLSVAKL 269
             +Y+   FS+ L  N D F + DVP  +  KP+S+  L
Sbjct:   883 VYEPNPFSKYLEDNSDFFSEQDVP--APPKPVSLHPL 917

GO:0016605 "PML body" evidence=IEA

GO:0005635 "nuclear envelope" evidence=IEA

TAIR|locus:2060430 ALKBH2 "homolog of E. coli alkB" [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 7.0e-05, P = 7.0e-05
 Identities = 28/60 (46%), Positives = 40/60 (66%)

Query:    33 SSTRSSVRGQPS-DGISKVVFGGQVTDEEVESLNRRKPCSGYKMKEMTGSGIFAAGAEND 91
             +ST ++   QPS DGIS     GQ+T+EE ESL  +K CSG+K+KE+T S  F+   ++D
Sbjct:     6 NSTAANRSNQPSSDGISD----GQITNEEAESLINKKNCSGHKLKEVTDSDTFSDNGKDD 61


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.305   0.125   0.343    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      305       305   0.00098  115 3  11 23  0.41    35
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  596 (63 KB)
  Total size of DFA:  177 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  32.63u 0.17s 32.80t   Elapsed:  00:00:01
  Total cpu time:  32.63u 0.17s 32.80t   Elapsed:  00:00:01
  Start:  Fri May 10 21:15:33 2013   End:  Fri May 10 21:15:34 2013

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0006281 "DNA repair" evidence=IDA

GO:0035514 "DNA demethylase activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	305
pfam13266	297	pfam13266, DUF4057, Protein of unknown function (D	1e-157

>gnl|CDD|222016 pfam13266, DUF4057, Protein of unknown function (DUF4057)

 Score =  440 bits (1133), Expect = e-157
 Identities = 227/302 (75%), Positives = 258/302 (85%), Gaps = 6/302 (1%)

Query: 3   RSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEEVE 62
           R+TPVRKPHTSTADLL WSETPP DSPA  S+       QPSDGISKVVFGGQVTDEE E
Sbjct: 1   RATPVRKPHTSTADLLTWSETPPPDSPASTSAPARRPH-QPSDGISKVVFGGQVTDEEAE 59

Query: 63  SLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISHIS 122
           SLN+RKPCSGYK+KEMTGSGIFAA  END SES SANPT N KT LR   QA AGIS IS
Sbjct: 60  SLNKRKPCSGYKLKEMTGSGIFAANGENDASESASANPTAN-KTSLR---QAQAGISQIS 115

Query: 123 FGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPPEI 182
           F EE+S+SPKKPT++PEVAKQRELSGTLESE+++K+KKQIS+AKSKELSGHDIFAPPPEI
Sbjct: 116 FSEEESVSPKKPTSVPEVAKQRELSGTLESEADSKMKKQISNAKSKELSGHDIFAPPPEI 175

Query: 183 LPRP-AVRALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIYDKK 241
            PR  A R L LKEN + G+ AP++ +TSV V  PAG QS+I  +E+ V+KT+KKI+++K
Sbjct: 176 KPRSLAARLLELKENKDRGEPAPRNARTSVKVSNPAGGQSNIEFSEDSVVKTAKKIHNQK 235

Query: 242 FSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESS 301
           F+EL+GN+IFKGDVPP+SAEKPLS AKL+EMSGSNIFADGK ESRDYLGGVRKPPGGESS
Sbjct: 236 FTELTGNNIFKGDVPPASAEKPLSTAKLKEMSGSNIFADGKAESRDYLGGVRKPPGGESS 295

Query: 302 IA 303
           IA
Sbjct: 296 IA 297

This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 279 and 322 amino acids in length. Length = 297

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	305
PF13266	302	DUF4057: Protein of unknown function (DUF4057)	100.0
PF13266	302	DUF4057: Protein of unknown function (DUF4057)	100.0

>PF13266 DUF4057: Protein of unknown function (DUF4057)

Probab=100.00  E-value=4.4e-122  Score=857.56  Aligned_cols=297  Identities=77%  Similarity=1.152  Sum_probs=288.2

Q ss_pred             CCCCCCCCCCCccccccccCCCCCCCC----CCCCCCCCCCCCCCCCCcceEEeCcccchHHHHhhhccCCCCccccccc
Q 021942            3 RSTPVRKPHTSTADLLVWSETPPSDSP----AQASSTRSSVRGQPSDGISKVVFGGQVTDEEVESLNRRKPCSGYKMKEM   78 (305)
Q Consensus         3 r~~pvr~~h~stadll~w~~~~~~~~~----~~~~~~R~~~~~Qp~~giS~i~fg~~~T~e~~~~l~krKq~S~aK~KEm   78 (305)
                      |+||||+|||||||||+|+|+|+++++    ++++++|+   |||++|||+|+||+|||+||+++|+|||+||++|||||
T Consensus         1 r~~pvR~~HtsTadLltWse~~~~~~~~~~~~~~~a~Rs---hQPs~giskv~fGgQvT~EEAEsL~KRKpCS~~K~KEm   77 (302)
T PF13266_consen    1 RATPVRKPHTSTADLLTWSETPPPDSPAASSTSRPARRS---HQPSDGISKVVFGGQVTEEEAESLNKRKPCSGYKMKEM   77 (302)
T ss_pred             CCCCccCCCcCchhhccccCCCCcccccccCCCCCCCCC---CCCcccccccccCCcCCHHHHHHHhccCcCccccceec
Confidence            799999999999999999999987665    45899999   99999999999999999999999999999999999999


Q ss_pred             cCccCCCCCCCCCcCCCCCCCCCCCCCCccceeeccccCccceeccCCCCCCCCCCCCchHHHhhhccCCcccchhHHHH
Q 021942           79 TGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKL  158 (305)
Q Consensus        79 SGsgIFa~~~e~~~~~~~~~~~~p~n~tt~~~~~~~~~g~S~IsFgee~~vspkKp~s~~evAkqrelsg~~~de~~~~~  158 (305)
                      +|||||++++++++++.+.+++. +|++++|||||.++|+|||||++|++|+||||++++||||||||+||+++++|.++
T Consensus        78 TGSGIF~~~~e~~~se~~san~~-~~rt~vr~yQq~~~giSqISF~~eesvsPKKpts~~EVAKQRELSGTlese~D~k~  156 (302)
T PF13266_consen   78 TGSGIFSANGEDDASESGSANPT-PNRTGVRMYQQAINGISQISFSEEESVSPKKPTSLPEVAKQRELSGTLESEADSKM  156 (302)
T ss_pred             ccccccccCCCCcccccccCCCC-ccccccceecccccccceeeecCCCCcCCCCccchHHHHHHhhhcCccccchhhHH
Confidence            99999999999999998877743 57999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhhccCCCCCCCCCCCCChhHH-HHHhhhhccCCCCCCCCCccccccccCCCCCCCCccccCccchhhhhhh
Q 021942          159 KKQISDAKSKELSGHDIFAPPPEILPRPAV-RALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKI  237 (305)
Q Consensus       159 ~KqlS~AK~KELSGsdIFApp~~~~p~~~~-~~~~~~~~~~~gkp~~Rd~~~s~~vr~P~GG~SsI~fge~~~~kt~kki  237 (305)
                      +||+|+||+||||||||||||++++||+++ |.||.+|+++++++.+|+++++|+|.+|+||+|+|.|++|+|+||+|||
T Consensus       157 kkq~S~AK~KELSGhdIFapp~~~~pr~~~~r~le~k~~~~~~e~~~~~~~ts~~~~n~a~~~s~~~~~~~~~~Ktakki  236 (302)
T PF13266_consen  157 KKQISNAKSKELSGHDIFAPPPEIKPRSLTARSLELKENKDRGEPAPRNVRTSVKVSNPAGGQSNIEFGEDSVVKTAKKI  236 (302)
T ss_pred             HhhhhhhhhhhcccCcccCCCccCCCCcchhhhhhhcccccccCCCCCcccccccccCCcCcccccccccCcchhhhhhh
Confidence            999999999999999999999999999975 9999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhccccCCCCCCCCCCCCCCCCcchhhhhhhccCCcccCCCCCCccccCCCcccCCCCCCCcc
Q 021942          238 YDKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIA  303 (305)
Q Consensus       238 ~~~K~~el~Gn~Ifk~d~~~~~~ek~ls~Akl~emsGsdIFadgk~~~Rd~~gg~rkpPGGeSsIa  303 (305)
                      |+|||+||+||||||+|.||+++||+||+||||||+|+|||||||+++|||+|||||||||+||||
T Consensus       237 ~~~K~aeltGN~IFk~d~p~~saek~lS~AKlrEmsGsdIFaDgk~~~rd~~gg~rkPPGG~SSIa  302 (302)
T PF13266_consen  237 SNQKFAELTGNNIFKGDVPPASAEKPLSSAKLREMSGSDIFADGKAESRDYLGGVRKPPGGESSIA  302 (302)
T ss_pred             hhhhhhhcccCcccCCCCCCCCcccchhhhhHhhcccccccccCCcccchhcCCccCCCCCCCcCC
Confidence            999999999999999999999999999999999999999999999999999999999999999997

>PF13266 DUF4057: Protein of unknown function (DUF4057)

Probab=100.00  E-value=1.4e-47  Score=358.12  Aligned_cols=167  Identities=30%  Similarity=0.384  Sum_probs=153.6

Q ss_pred             CCCCCCCCCCC-CCCCcceEEeCccc---------------------chHHHHhhhccCCCCccccccccCccCCCCCCC
Q 021942           32 ASSTRSSVRGQ-PSDGISKVVFGGQV---------------------TDEEVESLNRRKPCSGYKMKEMTGSGIFAAGAE   89 (305)
Q Consensus        32 ~~~~R~~~~~Q-p~~giS~i~fg~~~---------------------T~e~~~~l~krKq~S~aK~KEmSGsgIFa~~~e   89 (305)
                      ++++|+   || ..+|||||+||++.                     |+|.+.+++.+||+|+||+|||+|||||+++++
T Consensus       103 rt~vr~---yQq~~~giSqISF~~eesvsPKKpts~~EVAKQRELSGTlese~D~k~kkq~S~AK~KELSGhdIFapp~~  179 (302)
T PF13266_consen  103 RTGVRM---YQQAINGISQISFSEEESVSPKKPTSLPEVAKQRELSGTLESEADSKMKKQISNAKSKELSGHDIFAPPPE  179 (302)
T ss_pred             ccccce---ecccccccceeeecCCCCcCCCCccchHHHHHHhhhcCccccchhhHHHhhhhhhhhhhcccCcccCCCcc
Confidence            566777   77 55899999999988                     788787888889999999999999999999999


Q ss_pred             CCcCCC---------CC--CCCCCCCCCccceeeccccCccceeccCCCCCCCCCCCCchHHHhhhccCCcccchhHHHH
Q 021942           90 NDESES---------GS--ANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKL  158 (305)
Q Consensus        90 ~~~~~~---------~~--~~~~p~n~tt~~~~~~~~~g~S~IsFgee~~vspkKp~s~~evAkqrelsg~~~de~~~~~  158 (305)
                      +.++..         +.  ..+.|++.++++++.++++|+|+|.|++|++|+++|+||.+|||+|+||+||++|.++.++
T Consensus       180 ~~pr~~~~r~le~k~~~~~~e~~~~~~~ts~~~~n~a~~~s~~~~~~~~~~Ktakki~~~K~aeltGN~IFk~d~p~~sa  259 (302)
T PF13266_consen  180 IKPRSLTARSLELKENKDRGEPAPRNVRTSVKVSNPAGGQSNIEFGEDSVVKTAKKISNQKFAELTGNNIFKGDVPPASA  259 (302)
T ss_pred             CCCCcchhhhhhhcccccccCCCCCcccccccccCCcCcccccccccCcchhhhhhhhhhhhhhcccCcccCCCCCCCCc
Confidence            999852         22  2345789999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhhccCCCCCCCCCCCCChhHHHHHhhhhccCCCCCCCCCccccccccCCCCCCCCcc
Q 021942          159 KKQISDAKSKELSGHDIFAPPPEILPRPAVRALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSIS  224 (305)
Q Consensus       159 ~KqlS~AK~KELSGsdIFApp~~~~p~~~~~~~~~~~~~~~gkp~~Rd~~~s~~vr~P~GG~SsI~  224 (305)
                      +|+||.||+|||+|||||||                     |||+.|||++  |||+||||+|+|+
T Consensus       260 ek~lS~AKlrEmsGsdIFaD---------------------gk~~~rd~~g--g~rkPPGG~SSIa  302 (302)
T PF13266_consen  260 EKPLSSAKLREMSGSDIFAD---------------------GKAESRDYLG--GVRKPPGGESSIA  302 (302)
T ss_pred             ccchhhhhHhhccccccccc---------------------CCcccchhcC--CccCCCCCCCcCC
Confidence            99999999999999999999                     8999999999  9999999999996

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00