Citrus Sinensis ID: 022014
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 304 | ||||||
| 224105945 | 394 | predicted protein [Populus trichocarpa] | 0.930 | 0.718 | 0.791 | 1e-138 | |
| 225434550 | 392 | PREDICTED: uncharacterized protein LOC10 | 0.927 | 0.719 | 0.787 | 1e-135 | |
| 297745877 | 302 | unnamed protein product [Vitis vinifera] | 0.927 | 0.933 | 0.787 | 1e-134 | |
| 224055329 | 339 | predicted protein [Populus trichocarpa] | 0.914 | 0.820 | 0.777 | 1e-133 | |
| 356553086 | 359 | PREDICTED: uncharacterized protein LOC10 | 0.927 | 0.785 | 0.767 | 1e-133 | |
| 255570858 | 405 | conserved hypothetical protein [Ricinus | 0.930 | 0.698 | 0.781 | 1e-133 | |
| 449526756 | 345 | PREDICTED: uncharacterized LOC101217703 | 0.930 | 0.820 | 0.761 | 1e-132 | |
| 449455019 | 390 | PREDICTED: uncharacterized protein LOC10 | 0.930 | 0.725 | 0.761 | 1e-132 | |
| 356566070 | 388 | PREDICTED: uncharacterized protein LOC10 | 0.930 | 0.729 | 0.734 | 1e-128 | |
| 356541751 | 388 | PREDICTED: uncharacterized protein LOC10 | 0.930 | 0.729 | 0.730 | 1e-128 |
| >gi|224105945|ref|XP_002313988.1| predicted protein [Populus trichocarpa] gi|222850396|gb|EEE87943.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 224/283 (79%), Positives = 254/283 (89%)
Query: 22 LIRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFL 81
L RFNGLEFL+ M+GK++MFVGDSLG NQWESLIC+I ++ PRT T M+RGDP S FKF
Sbjct: 112 LPRFNGLEFLLNMRGKSMMFVGDSLGRNQWESLICLISSSVPRTSTQMSRGDPFSIFKFS 171
Query: 82 DYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQG 141
DY +S+SFY+APYLVDIDVV GKRVL+LE+ISGN +W N DVL FNTGHWWSH+GSLQG
Sbjct: 172 DYDVSISFYKAPYLVDIDVVQGKRVLRLEEISGNANAWRNVDVLIFNTGHWWSHQGSLQG 231
Query: 142 WDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAG 201
WDYMES GT+YQDMDRLVALE+GLRTWA WVD+NID ++TRVFFQSISPTHYNPSEWSAG
Sbjct: 232 WDYMESGGTFYQDMDRLVALERGLRTWAKWVDSNIDTTRTRVFFQSISPTHYNPSEWSAG 291
Query: 202 STSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHP 261
+T +T +NCYGET PM+G TYPGAYPDQMRVVD VIRDMH+PAYLLDITMLSELRKDGHP
Sbjct: 292 TTVATTRNCYGETTPMNGMTYPGAYPDQMRVVDTVIRDMHNPAYLLDITMLSELRKDGHP 351
Query: 262 SIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY 304
SIYSGDL+P+Q+A+P SADCSHWCLPGLPDTWNQL Y ALF+
Sbjct: 352 SIYSGDLSPQQRADPSGSADCSHWCLPGLPDTWNQLFYAALFF 394
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225434550|ref|XP_002277229.1| PREDICTED: uncharacterized protein LOC100263882 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297745877|emb|CBI15933.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224055329|ref|XP_002298483.1| predicted protein [Populus trichocarpa] gi|222845741|gb|EEE83288.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356553086|ref|XP_003544889.1| PREDICTED: uncharacterized protein LOC100795193 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255570858|ref|XP_002526381.1| conserved hypothetical protein [Ricinus communis] gi|223534292|gb|EEF36005.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|449526756|ref|XP_004170379.1| PREDICTED: uncharacterized LOC101217703 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449455019|ref|XP_004145251.1| PREDICTED: uncharacterized protein LOC101208082 [Cucumis sativus] gi|449470704|ref|XP_004153056.1| PREDICTED: uncharacterized protein LOC101217703 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356566070|ref|XP_003551258.1| PREDICTED: uncharacterized protein LOC100818177 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356541751|ref|XP_003539337.1| PREDICTED: uncharacterized protein LOC100813612 [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 304 | ||||||
| TAIR|locus:2178813 | 402 | PMR5 "AT5G58600" [Arabidopsis | 0.917 | 0.694 | 0.687 | 6.8e-111 | |
| TAIR|locus:2045688 | 398 | TBL45 "AT2G30010" [Arabidopsis | 0.924 | 0.706 | 0.651 | 2.3e-103 | |
| TAIR|locus:2029959 | 380 | TBL38 "AT1G29050" [Arabidopsis | 0.868 | 0.694 | 0.530 | 2.7e-77 | |
| TAIR|locus:2055425 | 385 | TBL37 "AT2G34070" [Arabidopsis | 0.868 | 0.685 | 0.514 | 2.5e-74 | |
| TAIR|locus:2055878 | 364 | AT2G31110 "AT2G31110" [Arabido | 0.868 | 0.725 | 0.476 | 6.1e-71 | |
| TAIR|locus:2037498 | 359 | TBL42 "TRICHOME BIREFRINGENCE- | 0.868 | 0.735 | 0.491 | 1.3e-70 | |
| TAIR|locus:2041574 | 367 | TBL39 "AT2G42570" [Arabidopsis | 0.871 | 0.722 | 0.482 | 8.9e-70 | |
| TAIR|locus:2099402 | 356 | TBL41 "TRICHOME BIREFRINGENCE- | 0.865 | 0.738 | 0.487 | 1.9e-67 | |
| TAIR|locus:2170184 | 608 | TBR [Arabidopsis thaliana (tax | 0.898 | 0.449 | 0.390 | 2.2e-57 | |
| TAIR|locus:2080280 | 379 | TBL36 "AT3G54260" [Arabidopsis | 0.851 | 0.683 | 0.416 | 3.6e-57 |
| TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1095 (390.5 bits), Expect = 6.8e-111, P = 6.8e-111
Identities = 194/282 (68%), Positives = 239/282 (84%)
Query: 25 FNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYG 84
FNG +FL+KMKGKT+MF GDSLG NQWESLIC+I ++AP TRT MTRG PLSTF+FLDYG
Sbjct: 122 FNGAQFLLKMKGKTIMFAGDSLGKNQWESLICLIVSSAPSTRTEMTRGLPLSTFRFLDYG 181
Query: 85 ISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDY 144
I++SFY+AP+LVDID V GKRVLKL++ISGN +W +AD+L FNTGHWWSH GS+QGWD
Sbjct: 182 ITMSFYKAPFLVDIDAVQGKRVLKLDEISGNANAWHDADLLIFNTGHWWSHTGSMQGWDL 241
Query: 145 MESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTS 204
++S +YYQDMDR VA+EK LRTWA WV+ ++DRS+T+V F SISPTH NPS+W+A S+S
Sbjct: 242 IQSGNSYYQDMDRFVAMEKALRTWAYWVETHVDRSRTQVLFLSISPTHDNPSDWAA-SSS 300
Query: 205 STAKNCYGETAPMSGTTYP-GAYPDQMR-VVDAVIRDMHSPAYLLDITMLSELRKDGHPS 262
S +KNCYGET P++GT YP +Y DQ+R V+ V+ MH+PA+LLDIT+LS LRKDGHPS
Sbjct: 301 SGSKNCYGETEPITGTAYPVSSYTDQLRSVIVEVLHGMHNPAFLLDITLLSSLRKDGHPS 360
Query: 263 IYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY 304
+YSG ++ Q++ PD+SADCSHWCLPGLPDTWNQLLYT L Y
Sbjct: 361 VYSGLISGSQRSRPDQSADCSHWCLPGLPDTWNQLLYTLLIY 402
|
|
| TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 304 | |||
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 0.0 | |
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 1e-110 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
Score = 563 bits (1453), Expect = 0.0
Identities = 236/283 (83%), Positives = 260/283 (91%), Gaps = 1/283 (0%)
Query: 22 LIRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFL 81
L RFNGLEFL+KMKGKTVMFVGDSLG NQWESLIC+I ++ P TRT M+RGDPLSTFKFL
Sbjct: 106 LPRFNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFL 165
Query: 82 DYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQG 141
DYG+S+SFY+APYLVDID V GKRVLKLE+ISGN +W +ADVL FNTGHWWSH+GSLQG
Sbjct: 166 DYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQG 225
Query: 142 WDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAG 201
WDY+ES GTYYQDMDRLVALEK LRTWA WVD N+DRS+TRVFFQSISPTHYNPSEWSAG
Sbjct: 226 WDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAG 285
Query: 202 STSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHP 261
++++T KNCYGET PMSG TYPGAYPDQMRVVD VIR MH+PAYLLDIT+LSELRKDGHP
Sbjct: 286 ASTTT-KNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHP 344
Query: 262 SIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY 304
SIYSGDL+P Q+ANPDRSADCSHWCLPGLPDTWNQL YTALF+
Sbjct: 345 SIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF 387
|
Length = 387 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 304 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.22 | |
| COG2845 | 354 | Uncharacterized protein conserved in bacteria [Fun | 91.27 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-102 Score=749.56 Aligned_cols=285 Identities=82% Similarity=1.430 Sum_probs=265.3
Q ss_pred CccCCCCCHHHHHHHhcCCeEEEEeccchhhHHHHHHHHhhccCCCCceEEeeCCCeeEEEEeecCeEEEEEeccceeee
Q 022014 19 IVCLIRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDI 98 (304)
Q Consensus 19 ~C~Lprfd~~~fl~~lrgK~l~FVGDSl~Rnq~~SLlClL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLV~~ 98 (304)
+|+||||||.+|||+|||||||||||||+|||||||+|||++++|+.++...++++..+|+|++||+||+||||||||+.
T Consensus 103 gC~LPRFda~~fLe~~RgKrl~FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~ 182 (387)
T PLN02629 103 NCELPRFNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDI 182 (387)
T ss_pred CCCCCCcCHHHHHHHhcCCeEEEeccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEee
Confidence 99999999999999999999999999999999999999999999877767777788999999999999999999999998
Q ss_pred cccccceeEEeccCCccccCcccccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhhcCC
Q 022014 99 DVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDR 178 (304)
Q Consensus 99 ~~~~~~~~l~lD~~~~~a~~w~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~ 178 (304)
++....+.|+||++++.+..|+++|||||||||||.+++..++++|++.|+.++++|+..+||++||+||++||++++++
T Consensus 183 ~~~~~~~~l~LD~id~~a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~ 262 (387)
T PLN02629 183 DAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDR 262 (387)
T ss_pred ecCCCceeEEecCcchhhhhhccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCC
Confidence 87766788999999988899999999999999999999988999999999999999999999999999999999999998
Q ss_pred CCceEEEeecCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhcCCCeEEeecccccccccC
Q 022014 179 SKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKD 258 (304)
Q Consensus 179 ~k~~vffRt~SP~Hf~gg~W~~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdIt~ls~~R~D 258 (304)
.+++|||||+||+||+||+||+++++. +|+|+++|+|+.++++.+....+++++++++++++.+|++||||+||++|||
T Consensus 263 ~kt~vffrT~SP~Hfe~g~Wn~gg~~~-~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~D 341 (387)
T PLN02629 263 SRTRVFFQSISPTHYNPSEWSAGASTT-TKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKD 341 (387)
T ss_pred CCcEEEEEecCcccccCCCcCCCCCCC-CCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCC
Confidence 999999999999999999999955544 5789999999998777766667788999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccCCCCCCCCCcccccCCCchhHHHHHHHHHhhC
Q 022014 259 GHPSIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY 304 (304)
Q Consensus 259 gHp~~y~~~~~~~~~~~~~~~~DC~HWCLPGv~DtWNelL~~~L~~ 304 (304)
||||+|+++++++++++|..++||+||||||||||||||||++|++
T Consensus 342 gHPs~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~~ 387 (387)
T PLN02629 342 GHPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF 387 (387)
T ss_pred CCcccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHhC
Confidence 9999998766677777888899999999999999999999999975
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >COG2845 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 304 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 1e-06
Identities = 46/357 (12%), Positives = 104/357 (29%), Gaps = 113/357 (31%)
Query: 16 VLWIVCLIRFNGLEFLVKMKGKTVMFVGDSLGLN-QWESLICMIH----AAAPRTRTHMT 70
+ W + + ++ FV + L +N ++ L+ I + TR ++
Sbjct: 67 LFWTLLSKQEEMVQ----------KFVEEVLRINYKF--LMSPIKTEQRQPSMMTRMYIE 114
Query: 71 RGDPL--STFKFLDYGIS------------VSFYRAPYLVDIDVVHGKRVLKLEDISGNG 116
+ D L F Y +S + A ++ + G G+G
Sbjct: 115 QRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL----IDGV--------LGSG 162
Query: 117 KSWLNADVLS-------FNTGHWWSHEGSLQGWD-YMESMGTYYQDMD------------ 156
K+W+ DV + +W + + + +E + +D
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222
Query: 157 ---RLVALEKGLRT-----------------WANWVDNNID-RSKTRV---------FFQ 186
R+ +++ LR N + K + F
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLS 282
Query: 187 SISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYL 246
+ + TH + S T K+ + P P ++ +P
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKYLDCR----PQDLPREVLTT--------NP--- 327
Query: 247 LDITMLSELRKDGHPSIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALF 303
+++++E +D + + + + N D+ L L + ++ L
Sbjct: 328 RRLSIIAESIRD-GLATW----DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 304 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 96.64 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0017 Score=54.96 Aligned_cols=91 Identities=13% Similarity=0.157 Sum_probs=53.2
Q ss_pred cccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCCCCCCCCCC
Q 022014 121 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSA 200 (304)
Q Consensus 121 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~Hf~gg~W~~ 200 (304)
..|+|||+.|..=.. .+ .+.|+..|+++++-+.+.. ...+++|-+..|..... +
T Consensus 74 ~pd~Vvi~~G~ND~~-------------------~~-~~~~~~~l~~ii~~l~~~~--p~~~ii~~~~~P~~~~~--~-- 127 (200)
T 4h08_A 74 KFDVIHFNNGLHGFD-------------------YT-EEEYDKSFPKLIKIIRKYA--PKAKLIWANTTPVRTGE--G-- 127 (200)
T ss_dssp CCSEEEECCCSSCTT-------------------SC-HHHHHHHHHHHHHHHHHHC--TTCEEEEECCCCCEESG--G--
T ss_pred CCCeEEEEeeeCCCC-------------------CC-HHHHHHHHHHHHHHHhhhC--CCccEEEeccCCCcccc--c--
Confidence 579999999875110 11 3578888988888775432 35678888888765321 0
Q ss_pred CCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhcCCCeEEeecccccc
Q 022014 201 GSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSE 254 (304)
Q Consensus 201 ~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdIt~ls~ 254 (304)
+... .+. .......++++++++++.+ +.++|+...+.
T Consensus 128 -------~~~~---~~~-----~~~~~~~n~~~~~~a~~~~--v~~iD~~~~~~ 164 (200)
T 4h08_A 128 -------MKEF---API-----TERLNVRNQIALKHINRAS--IEVNDLWKVVI 164 (200)
T ss_dssp -------GCEE---CTH-----HHHHHHHHHHHHHHHHHTT--CEEECHHHHHT
T ss_pred -------cccc---chh-----HHHHHHHHHHHHHHhhhcc--eEEEecHHhHh
Confidence 0000 000 0000123666777766654 89999876553
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 304 | |||
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 97.0 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 87.7 | |
| d1pvva2 | 163 | Ornithine transcarbamoylase {Archaeon Pyrococcus f | 83.65 |
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein Lp3323 species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.00 E-value=0.00092 Score=53.96 Aligned_cols=15 Identities=27% Similarity=0.366 Sum_probs=12.9
Q ss_pred hcCCeEEEEeccchh
Q 022014 34 MKGKTVMFVGDSLGL 48 (304)
Q Consensus 34 lrgK~l~FVGDSl~R 48 (304)
+..|||+|+|||++-
T Consensus 2 ~~~kri~~iGDSit~ 16 (207)
T d3dc7a1 2 VSFKRPAWLGDSITA 16 (207)
T ss_dssp BCCSSEEEEESTTTS
T ss_pred CCCCEEEEEehHhhc
Confidence 457999999999984
|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|