Citrus Sinensis ID: 022084

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300---
Protein Sequence
MLQMFRALLDFNLLLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVKTNLPKRMKGEPIKEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQSSVEKGDPDTKSVASVLSDEDTKKELQKRDYKEFLADSKPVIDGNNKLETSPLKRKGNVKDAGEKQPTLFSYYSKK
Secondary Structure (PSIPRED)
cccccccccccccccEEEEEEEcccccccEEEEEccccEEEEEEEccccccccccEEEEEEEEcccccccccccccccccEEcccccHHHccccccccHHHHHcccccccccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEEccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHcccEEEEEEEEccccccccEEEEcccccEEEHHHHHHcccccccccEEEEEEEEccccHHHHHHHccccEEEccHHHHHHHcccccccHHHHHcccccHHHEEEEEccccccccccccHHHcccccccccccccccHHHHHHHHHHccccccccccccccccccccHHHcccccccccccccHHHHHcccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccHHHHcccc
Coil and Loop (DISEMBL)
MLQMFRALLDFNLLLRFYEWkkdgskkqpyyvhfkdgrpLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHdrmpvilgdkessdawlngsssskydtilkpyeesdlvwypvtpamgklsfdgpecikeiplktegknpisnffLKKEIKKEQeskmdekssfdesvktnlpkrmkgepikeikeepvsgleekysfdttaqtnlpksvkdeavtaddirtqssvekgdpdtksvasvlsdedtkKELQKRDYKEfladskpvidgnnkletsplkrkgnvkdagekqptlfsyyskk
Flexible Loop (DISEMBL)
MLQMFRALLDFNLLLRFYEWKkdgskkqpyyvhfKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEiplktegknpisnffLKKEIKKeqeskmdekssfdesvktnlpkrmkgepikeikeepvsglEEKYSfdttaqtnlpksvkdeavtaddirtqssvekgdpdtksvasvlsdedtkkelqkrdykefladskpvidgnnkletsplkrkgnvkdagekqptlfsyyskk
Low Complexity Region (SEG)
MLQMFRALLDFNLLLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVKTNLPKRMKGepikeikeepVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQSSVEKGDPDTKSVASVLSDEDTKKELQKRDYKEFLADSKPVIDGNNKLETSPLKRKGNVKDAGEKQPTLFSYYSKK
Disordered region (IsUnstruct)
***MFRALLDFNLLLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDK****AWL******KYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKT*****ISNFFL*********************************************************************************************************************************************************
Disordered Region (DISOPRED)
**QMFRALLDFNLLLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECI********************************************************************************************************************************************************************FSYYSKK
Disordered Region (DISEMBL)
MLQMFRALLDFNLLLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIK****************VKTNLPKRMKGEPIKEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQ*************************LQKRDYKEFLADSKPVIDGNNKLETSPLKRKGNVKDAGEKQPTLFSYYSKK
Disordered Region (DISPRO)
MLQMFRALLDFNLLLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPL************************************************************************************************************************************************************PT****Y*K*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLQMFRALLDFNLLLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVKTNLPKRMKGEPIKEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQSSVEKGDPDTKSVASVLSDEDTKKELQKRDYKEFLADSKPVIDGNNKLETSPLKRKGNVKDAGEKQPTLFSYYSKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	303	2.2.26 [Sep-21-2011]
Q04471	368	Uncharacterized protein Y	yes	no	0.716	0.589	0.32	1e-18
Q6P7N4	335	UPF0361 protein C3orf37 h	yes	no	0.462	0.417	0.308	5e-17
Q6IND6	336	UPF0361 protein C3orf37 h	N/A	no	0.462	0.416	0.308	1e-15
O64131	224	UPF0361 protein yoqW OS=B	yes	no	0.382	0.517	0.375	2e-14
O31916	224	UPF0361 protein YoqW OS=B	yes	no	0.382	0.517	0.375	2e-14
Q5ZJT1	336	UPF0361 protein C3orf37 h	yes	no	0.392	0.354	0.302	8e-14
O34915	219	UPF0361 protein YobE OS=B	no	no	0.333	0.461	0.4	2e-13
Q8R1M0	353	UPF0361 protein C3orf37 h	yes	no	0.382	0.328	0.267	2e-12
Q5XIJ1	353	UPF0361 protein C3orf37 h	yes	no	0.382	0.328	0.274	3e-12
O34906	227	UPF0361 protein YoaM OS=B	no	no	0.333	0.444	0.380	7e-12

>sp|Q04471|YM04_YEAST Uncharacterized protein YMR114C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR114C PE=1 SV=1

 Score = 94.0 bits (232), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 128/250 (51%), Gaps = 33/250 (13%)

Query: 13  LLLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQ 72
           L+  ++EWK  G KK PY++  +DGR +  A +YD     E + LYTFTI+T      L+
Sbjct: 126 LMSGYFEWKTVGKKKTPYFISRRDGRLMFVAGMYDY---VEKDDLYTFTIITAQGPRELE 182

Query: 73  WLHDRMPVILG-DKESSDAWLNGS----SSSKYDTILKP-YEESDLVWYPVTPAMGKLSF 126
           WLH+RMP +L    ES DAW++      S+ +   +LKP Y+ES L +Y VT  +GK + 
Sbjct: 183 WLHERMPCVLEPGTESWDAWMDVDKTTWSTEELVKLLKPDYDESKLQFYQVTDDVGKTTN 242

Query: 127 DGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFD-ESVKTNLPKRMKGEPI 185
            G   IK  PL  E     S+ F  K  K+E   + D +   D   VK +  K +KGE +
Sbjct: 243 TGERLIK--PLLKED----SDMFSVKREKEEALLENDNEQGIDNRGVKGD--KSLKGEDV 294

Query: 186 ----KEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQ----SSVEKGDPDT 237
               K +K     GL++    +   +T LP    +E    D ++ +    S   +G+ + 
Sbjct: 295 FNQKKSLKRNSYDGLKKN---EEQEETTLP----EEGSIGDRVKREEANLSPKREGNREK 347

Query: 238 KSVASVLSDE 247
           +++ ++L ++
Sbjct: 348 RNIVNMLGNQ 357

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q6P7N4|CC037_XENTR UPF0361 protein C3orf37 homolog OS=Xenopus tropicalis GN=TGas027m07.1 PE=2 SV=1

 Score = 88.6 bits (218), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 19/159 (11%)

Query: 4   MFRALLDFNLLLRFYEWKKDGSKKQPYYVHF-----------------KDGRPLVFAALY 46
           +F+      L   FYEW++  S+KQPYY++F                    R L  A L+
Sbjct: 114 LFKGKRCVVLADGFYEWQRQNSEKQPYYIYFPQIKAEKSPAEQDITDWNGQRLLTMAGLF 173

Query: 47  DTWQS-SEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILK 105
           D W+  + GE LY++T++T  SS  + W+HDRMP IL   E+   WL+       D +  
Sbjct: 174 DCWEPPNGGETLYSYTVITVDSSKTMNWIHDRMPAILDGDEAVRKWLDFGEVPTKDALKL 233

Query: 106 PYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNP 144
            +   ++ ++PV+  +     + PEC+  I L T+ K P
Sbjct: 234 IHPIENITYHPVSTVVNNSRNNTPECMAAIIL-TQKKGP 271

Xenopus tropicalis (taxid: 8364)

>sp|Q6IND6|CC037_XENLA UPF0361 protein C3orf37 homolog OS=Xenopus laevis PE=2 SV=1

 Score = 84.0 bits (206), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 19/159 (11%)

Query: 4   MFRALLDFNLLLRFYEWKKDGSKKQPYYVHF-----------------KDGRPLVFAALY 46
           +F+      L   FYEWK+   +KQPYY++F                    R L  A L+
Sbjct: 114 LFKGRRCVVLADGFYEWKRQDGEKQPYYIYFPQIKSEKFPEEQDMMDWNGQRLLTMAGLF 173

Query: 47  DTWQS-SEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILK 105
           D W+  S GE LY++T++T  SS  +  +HDRMP IL   E+   WL+    S  D +  
Sbjct: 174 DCWEPPSGGEPLYSYTVITVDSSKTMNCIHDRMPAILDGDEAIRKWLDFGEVSTQDALKL 233

Query: 106 PYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNP 144
            +   ++ ++PV+  +     +  ECI  + L T+ K P
Sbjct: 234 IHPIENITYHPVSTVVNNSRNNSTECIAAVIL-TQKKGP 271

Xenopus laevis (taxid: 8355)

>sp|O64131|YOQW_BPSPB UPF0361 protein yoqW OS=Bacillus phage SPbeta GN=yoqW PE=3 SV=1

 Score = 80.1 bits (196), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 4/120 (3%)

Query: 17  FYEWKK-DGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLH 75
           FYEWK+ D   K P  +  K      FA LY+ W + EG  LYT TI+TT  +  ++ +H
Sbjct: 104 FYEWKRLDPKTKIPMRIKLKSSNLFAFAGLYEKWNTPEGNPLYTCTIITTKPNELMEDIH 163

Query: 76  DRMPVILGDKESSDAWLNGSSSSK--YDTILKPYEESDLVWYPVTPAMGKLSFDGPECIK 133
           DRMPVIL D E+   WLN  ++      ++L+PY+  D+  Y V+  +     + PE I+
Sbjct: 164 DRMPVILTD-ENEKEWLNPKNTDPDYLQSLLQPYDADDMEAYQVSSLVNSPKNNSPELIE 222

Bacillus phage SPbeta (taxid: 66797)

>sp|O31916|YOQW_BACSU UPF0361 protein YoqW OS=Bacillus subtilis (strain 168) GN=yoqW PE=3 SV=1

 Score = 80.1 bits (196), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 4/120 (3%)

Query: 17  FYEWKK-DGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLH 75
           FYEWK+ D   K P  +  K      FA LY+ W + EG  LYT TI+TT  +  ++ +H
Sbjct: 104 FYEWKRLDPKTKIPMRIKLKSSNLFAFAGLYEKWNTPEGNPLYTCTIITTKPNELMEDIH 163

Query: 76  DRMPVILGDKESSDAWLNGSSSSK--YDTILKPYEESDLVWYPVTPAMGKLSFDGPECIK 133
           DRMPVIL D E+   WLN  ++      ++L+PY+  D+  Y V+  +     + PE I+
Sbjct: 164 DRMPVILTD-ENEKEWLNPKNTDPDYLQSLLQPYDADDMEAYQVSSLVNSPKNNSPELIE 222

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q5ZJT1|CC037_CHICK UPF0361 protein C3orf37 homolog OS=Gallus gallus GN=RCJMB04_15p13 PE=2 SV=1

 Score = 78.2 bits (191), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 23/142 (16%)

Query: 17  FYEWKKDGSKKQPYYVHF------------------KDGRPLVFAALYDTWQSSEG-EIL 57
           FYEW++ G  KQPY+++F                  +  R L  A ++D W+  +G E L
Sbjct: 125 FYEWQQRGGGKQPYFIYFPQNKKHPAEEEEDSDEEWRGWRLLTMAGIFDCWEPPKGGEPL 184

Query: 58  YTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDT--ILKPYEESDLVWY 115
           YT+TI+T  +S  + ++H RMP IL   E+ + WL+ +     +   +++P E  ++ ++
Sbjct: 185 YTYTIITVDASEDVSFIHHRMPAILDGDEAIEKWLDFAEVPTREAMKLIRPAE--NIAFH 242

Query: 116 PVTPAMGKLSFDGPECIKEIPL 137
           PV+  +  +  D PEC+  I L
Sbjct: 243 PVSTFVNSVRNDTPECLVPIEL 264

Gallus gallus (taxid: 9031)

>sp|O34915|YOBE_BACSU UPF0361 protein YobE OS=Bacillus subtilis (strain 168) GN=yobE PE=3 SV=1

 Score = 76.6 bits (187), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 4/105 (3%)

Query: 17  FYEWKK-DGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLH 75
           FYEWK+ D   K P  +  K      FA LY+ W + EG +LYT TI+T   S  ++ +H
Sbjct: 104 FYEWKRLDPKTKIPMRIKLKSSNLFAFAGLYEKWNTLEGNLLYTCTIITIKPSELMEDIH 163

Query: 76  DRMPVILGDKESSDAWLNGSSSSK--YDTILKPYEESDLVWYPVT 118
           DRMPVIL D E+   WLN  ++      ++L PY+  D+  Y V+
Sbjct: 164 DRMPVILTD-ENKKEWLNPKNTDPDYLQSLLLPYDADDMEAYQVS 207

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q8R1M0|CC037_MOUSE UPF0361 protein C3orf37 homolog OS=Mus musculus PE=2 SV=1

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 26/142 (18%)

Query: 17  FYEWKK--DGSKKQPYYVHF------KDG------------------RPLVFAALYDTWQ 50
           FYEW++    +++QPY+++F      K G                  R L  A ++D W+
Sbjct: 125 FYEWQRCQGTNQRQPYFIYFPQIKTEKSGGNDASDSSDNKEKVWDNWRLLTMAGIFDCWE 184

Query: 51  SSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEES 110
           +  GE LY+++I+T  S   L  +H RMP IL  +E+   WL+    +  + +   +   
Sbjct: 185 APGGECLYSYSIITVDSCRGLSDIHSRMPAILDGEEAVSKWLDFGEVATQEALKLIHPID 244

Query: 111 DLVWYPVTPAMGKLSFDGPECI 132
           ++ ++PV+P +     + PEC+
Sbjct: 245 NITFHPVSPVVNNSRNNTPECL 266

Mus musculus (taxid: 10090)

>sp|Q5XIJ1|CC037_RAT UPF0361 protein C3orf37 homolog OS=Rattus norvegicus PE=2 SV=1

 Score = 72.8 bits (177), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 26/142 (18%)

Query: 17  FYEWKK--DGSKKQPYYVHF------KDG------------------RPLVFAALYDTWQ 50
           FYEW++    +++QPY+++F      K G                  R L  A ++D W+
Sbjct: 125 FYEWQRCQGTNQRQPYFIYFPQSKTEKSGENSGSDSLNNKEEVWDNWRLLTMAGIFDCWE 184

Query: 51  SSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEES 110
             +GE LY+++I+T  S   L  +H RMP IL  +E+   WL+    S  + +   +   
Sbjct: 185 PPKGERLYSYSIITVDSCRGLSDIHSRMPAILDGEEAVSKWLDFGEVSTQEALKLIHPID 244

Query: 111 DLVWYPVTPAMGKLSFDGPECI 132
           ++ ++PV+P +     + PEC+
Sbjct: 245 NITFHPVSPVVNNSRNNTPECL 266

Rattus norvegicus (taxid: 10116)

>sp|O34906|YOAM_BACSU UPF0361 protein YoaM OS=Bacillus subtilis (strain 168) GN=yoaM PE=3 SV=1

 Score = 71.6 bits (174), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 4/105 (3%)

Query: 17  FYEWKK-DGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLH 75
           FYEWK+ D   K P  +  K      FA LY+ W + +G  LYT TI+TT  +  ++ +H
Sbjct: 104 FYEWKRLDSKTKIPMRIKLKSSALFAFAGLYEKWSTHQGYPLYTCTIITTEPNEFMKDIH 163

Query: 76  DRMPVILGDKESSDAWLNGSSSSK--YDTILKPYEESDLVWYPVT 118
           DRMPVIL      + WLN  ++S     ++L PY+  D+  Y V+
Sbjct: 164 DRMPVILAHDHEKE-WLNPKNTSPDYLQSLLLPYDADDMEAYQVS 207

Bacillus subtilis (strain 168) (taxid: 224308)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	303
255572628	409	conserved hypothetical protein [Ricinus	0.976	0.723	0.546	4e-83
359496462	392	PREDICTED: UPF0361 protein C3orf37 homol	0.920	0.711	0.565	1e-79
224069904	367	predicted protein [Populus trichocarpa]	0.818	0.675	0.550	1e-72
357504989	354	hypothetical protein MTR_7g052250 [Medic	0.828	0.709	0.524	6e-70
356527296	382	PREDICTED: UPF0361 protein C3orf37 homol	0.914	0.725	0.521	4e-66
147845025	370	hypothetical protein VITISV_026469 [Viti	0.848	0.694	0.504	4e-64
449465298	344	PREDICTED: LOW QUALITY PROTEIN: UPF0361	0.514	0.453	0.732	6e-61
449516117	267	PREDICTED: UPF0361 protein C3orf37 homol	0.475	0.539	0.756	1e-59
30683129	487	uncharacterized protein [Arabidopsis tha	0.584	0.363	0.609	2e-57
2739372	517	hypothetical protein [Arabidopsis thalia	0.584	0.342	0.609	3e-57

>gi|255572628|ref|XP_002527247.1| conserved hypothetical protein [Ricinus communis] gi|223533340|gb|EEF35091.1| conserved hypothetical protein [Ricinus communis]

 Score =  313 bits (803), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 171/313 (54%), Positives = 209/313 (66%), Gaps = 17/313 (5%)

Query: 5   FRALLDFNLLL----RFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTF 60
           FR LL  +  L     FYEWKKDGSKKQPYY+HFKDGRPLVFAALYD+WQ+SEGEILYTF
Sbjct: 100 FRRLLPKSRCLVAAEGFYEWKKDGSKKQPYYIHFKDGRPLVFAALYDSWQNSEGEILYTF 159

Query: 61  TILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPA 120
           TILTTSSS+AL+WLHDRMPVILGDKES+D WLNGSSSSKYD +L+ YE SDLVW PVTPA
Sbjct: 160 TILTTSSSSALEWLHDRMPVILGDKESTDTWLNGSSSSKYDVVLESYESSDLVWCPVTPA 219

Query: 121 MGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVKTNLPKRM 180
           MGK SFDGPEC+KEI +KTE K+ IS FF +KEIK EQE    E S+FD+SVK +LP+ +
Sbjct: 220 MGKSSFDGPECVKEIHVKTESKSTISKFFSRKEIKGEQELNSRE-STFDKSVKMDLPESV 278

Query: 181 KGE----------PIKEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQSSV 230
           K E          P  +I ++ +         +   +  +P   + +    D   T+  +
Sbjct: 279 KEEYESEEKLDIPPSNQINDQDLKSNVSTIPCEDETKCQIPDHDETKCQIPDHDETKCQI 338

Query: 231 EKGDPDTKSVASVLSDEDTKKELQKRDYKEFLADSKPVIDGNNKLETSPLKRKGNVKDAG 290
              D D  S  S L  ED      KR ++E L D +   DGN KL  +P ++K N+K  G
Sbjct: 339 P--DHDLISNVSKLPHEDATLGQPKRHHEEALIDRELNPDGNEKLRRNPARKKANLKSGG 396

Query: 291 EKQPTLFSYYSKK 303
           +KQPTL SY+ KK
Sbjct: 397 DKQPTLLSYFRKK 409

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496462|ref|XP_003635244.1| PREDICTED: UPF0361 protein C3orf37 homolog [Vitis vinifera] gi|296090568|emb|CBI40918.3| unnamed protein product [Vitis vinifera]

 Score =  302 bits (774), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 177/313 (56%), Positives = 209/313 (66%), Gaps = 34/313 (10%)

Query: 5   FRALLDFNLLL----RFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTF 60
           FR L+  N  L     FYEWKKDGSKKQPYY+H KDGRPLVFAAL+D+W +SEGEILYT 
Sbjct: 98  FRRLVPKNRCLVAVEGFYEWKKDGSKKQPYYIHLKDGRPLVFAALFDSWANSEGEILYTC 157

Query: 61  TILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPA 120
           TILTTSSS+ALQWLHDRMPVILGDKES+DAWLNGSSSS+++T+LKPYE+ DLVWYPVT A
Sbjct: 158 TILTTSSSSALQWLHDRMPVILGDKESTDAWLNGSSSSQFNTVLKPYEDPDLVWYPVTQA 217

Query: 121 MGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVKTNLPKRM 180
           MGK SF+GPECIKEI LK E + PIS FF  K IK EQ          +E VK+NLP+ +
Sbjct: 218 MGKPSFEGPECIKEIQLKNE-QRPISKFFSTKGIKNEQ-------GLSNEPVKSNLPQSL 269

Query: 181 KGEPIKE----IKEEPVSGLEEKYSFDTTAQ------TNLPKSVKDEAVTADDIRTQSSV 230
           K EP  E    +    V G  +     +  Q      TNLPKS+K E  T D        
Sbjct: 270 KEEPAIENSTGLPSSTVKGDHDSTCSRSIPQEESTWFTNLPKSLKQEPETEDKTGLPFP- 328

Query: 231 EKGDPDTKSVASVLSDEDTKKELQKRDYKEFLADSKPVIDGNNKLETSPLKRKGNV-KDA 289
             GD D+K       DE+  K   KRD++EF ADSKP  D   K   SP+ +KG + K+A
Sbjct: 329 --GDHDSK------CDEEATKLPIKRDFEEFSADSKPNTDTVEK--PSPVTKKGKLNKNA 378

Query: 290 GEKQPTLFSYYSK 302
           G+KQPTLFSY+ K
Sbjct: 379 GDKQPTLFSYFGK 391

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069904|ref|XP_002303080.1| predicted protein [Populus trichocarpa] gi|222844806|gb|EEE82353.1| predicted protein [Populus trichocarpa]

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 158/287 (55%), Positives = 189/287 (65%), Gaps = 39/287 (13%)

Query: 17  FYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHD 76
           FYEWKKDGSKKQPYY+HFKDGRPLVFAALYD+WQ+SEGEILYTFTI+TT++S+A+QWLH+
Sbjct: 120 FYEWKKDGSKKQPYYIHFKDGRPLVFAALYDSWQNSEGEILYTFTIVTTAASSAIQWLHE 179

Query: 77  RMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIP 136
           RMPVILGDKE++D WL+ SS+SK+DT+LKPYE SDLVWYPVTPAMGK SFDGPECIKEI 
Sbjct: 180 RMPVILGDKEATDTWLSVSSNSKFDTVLKPYEHSDLVWYPVTPAMGKPSFDGPECIKEIH 239

Query: 137 LKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVKTNLPKRMKGEPIKEIKEEPVSGL 196
           LK E K  IS FF +KE K+E      E+S+  +S+K                      L
Sbjct: 240 LKMEEKGTISKFFSRKEFKEESNP---EESTHGKSLK----------------------L 274

Query: 197 EEKYSFDTTAQTNLPKSVKDEAVTADDIRTQSSVEKGDPDTKSVASVLSDEDTKKELQKR 256
           E             PKSVK+E  + + + T  S +  D D KS     S E   K   KR
Sbjct: 275 E-------------PKSVKEENESEEKLETPCSAKTVDYDLKSELETFSHEGETKCKTKR 321

Query: 257 DYKEFLADSKPVIDGNNKLETSPLKRKGNVKDAGEKQPTLFSYYSKK 303
           D +E L DSK   D   K   SP K+K N+K   +KQPTL SY+ KK
Sbjct: 322 D-REELVDSKLKTDEIVKPRASPAKKKANLKSVDDKQPTLLSYFGKK 367

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357504989|ref|XP_003622783.1| hypothetical protein MTR_7g052250 [Medicago truncatula] gi|355497798|gb|AES79001.1| hypothetical protein MTR_7g052250 [Medicago truncatula]

 Score =  270 bits (690), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 159/303 (52%), Positives = 195/303 (64%), Gaps = 52/303 (17%)

Query: 5   FRALLDFNLLL----RFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTF 60
           FR LL  N  L     FYEWKKDGSKKQPYY+HFKDGRPLVFAALYD+WQ+SEGEILYTF
Sbjct: 100 FRRLLPKNRCLVAVEGFYEWKKDGSKKQPYYIHFKDGRPLVFAALYDSWQNSEGEILYTF 159

Query: 61  TILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPA 120
           TI+TTSSS+A +WLHDRMPVILGDK+++D WL  SS+S + +++KPYEESDLVWYPVTPA
Sbjct: 160 TIVTTSSSSAFKWLHDRMPVILGDKDTTDTWL--SSASSFKSVMKPYEESDLVWYPVTPA 217

Query: 121 MGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVKTNLPKRM 180
           MGK SFDGPECIKEI +KTEG  PIS FF KKE + E     D K            K +
Sbjct: 218 MGKPSFDGPECIKEIQIKTEGYIPISKFFSKKEAEVE-----DTKPEH---------KIL 263

Query: 181 KGEPIKEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQSSVEKGDPDTKSV 240
             EP+K                  T QT   K V +EA T          E+GD D KS 
Sbjct: 264 SHEPVK------------------TEQT---KDVSEEAKT----------EEGDTDLKS- 291

Query: 241 ASVLSDEDTKKELQKRDYKEFLADSKPVIDGNNKLETSPLKRKGNVKDAGEKQPTLFSYY 300
           + +   ++  +   KR+Y    +DSKP +  N+++  +P K+K   K A +KQPTLFSY+
Sbjct: 292 SGISPSQNVNRFAIKREYDAISSDSKPSLANNDQVSANPAKKKEKAKTADDKQPTLFSYF 351

Query: 301 SKK 303
            K+
Sbjct: 352 GKR 354

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527296|ref|XP_003532247.1| PREDICTED: UPF0361 protein C3orf37 homolog [Glycine max]

 Score =  257 bits (657), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 158/303 (52%), Positives = 205/303 (67%), Gaps = 26/303 (8%)

Query: 5   FRALLDFNLLL----RFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTF 60
           FR LL  +  L     FYEWKKDGSKKQPYY+HFKDGRPLVFAALYD+WQ+SEGE LYTF
Sbjct: 98  FRRLLPKSRCLVAVEGFYEWKKDGSKKQPYYIHFKDGRPLVFAALYDSWQNSEGETLYTF 157

Query: 61  TILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPA 120
           TI+TTSSS+ALQWLHDRMPVILG KES+D WL+ SS+S + +++KPYEESDLVWYPVT A
Sbjct: 158 TIVTTSSSSALQWLHDRMPVILGSKESTDIWLS-SSASSFKSVMKPYEESDLVWYPVTSA 216

Query: 121 MGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVKTNLPKRM 180
           MGK SFDGPECIKEI +K +G   IS FF KK   + +++K ++K+S  E VKT      
Sbjct: 217 MGKASFDGPECIKEIQVKAQGNTSISMFFSKKG-DESKDTKPEQKASCPEVVKT------ 269

Query: 181 KGEPIKEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQSSVEKGDPDTKSV 240
             E  +++ E   +  E+K        T+  + VK E    +D+R ++  E+G  D K  
Sbjct: 270 --EHTEDLTESKDTKPEQK--------TSSHEFVKTEPT--EDLRERAKTEEGGNDLKFH 317

Query: 241 ASVLSDEDTKKELQKRDYKEF-LADSKPVIDGNNKLETSPLKRKGNVKDAGEKQPTLFSY 299
            S  S   +   + KR+Y+ F  ADSKP +  ++++  +P K+K   K A +KQPTLFSY
Sbjct: 318 GSSHSQNVSMLPI-KREYETFSAADSKPALANHDQISPNPAKKKEKAKTANDKQPTLFSY 376

Query: 300 YSK 302
           + K
Sbjct: 377 FGK 379

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147845025|emb|CAN82703.1| hypothetical protein VITISV_026469 [Vitis vinifera]

 Score =  250 bits (639), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 158/313 (50%), Positives = 188/313 (60%), Gaps = 56/313 (17%)

Query: 5   FRALLDFNLLL----RFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTF 60
           FR L+  N  L     FYEWKKDGSKKQPYY+H KDGRPLVFAAL+D+W +SE       
Sbjct: 98  FRRLVPKNRCLVAVEGFYEWKKDGSKKQPYYIHLKDGRPLVFAALFDSWANSE------- 150

Query: 61  TILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPA 120
                          DRMPVILGDKES+DAWLNGSSSS+++T+LKPYE+ DLVWYPVT A
Sbjct: 151 ---------------DRMPVILGDKESTDAWLNGSSSSQFNTVLKPYEDPDLVWYPVTQA 195

Query: 121 MGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVKTNLPKRM 180
           MGK SF+GPECIKEI LK E + PIS FF  K IK EQ          +E VK+NLP+ M
Sbjct: 196 MGKPSFEGPECIKEIQLKNE-QRPISKFFSTKGIKNEQ-------GLSNEPVKSNLPQSM 247

Query: 181 KGEPIKE----IKEEPVSGLEEKYSFDTTAQ------TNLPKSVKDEAVTADDIRTQSSV 230
           K EP  E    +    V G  +     +  Q      TNLPKS+K E  T D        
Sbjct: 248 KEEPAIENSTGLPSSAVKGDHDSTCSRSVPQEESTWFTNLPKSLKQEPETEDKTGLPFP- 306

Query: 231 EKGDPDTKSVASVLSDEDTKKELQKRDYKEFLADSKPVIDGNNKLETSPLKRKGNV-KDA 289
             GD D+K       DE+  K   KRD++EF ADSKP  D   K   SP+ +KG + K+A
Sbjct: 307 --GDHDSK------CDEEATKLPIKRDFEEFSADSKPNTDTVEK--PSPVTKKGKLNKNA 356

Query: 290 GEKQPTLFSYYSK 302
           G+KQPTLFSY+ K
Sbjct: 357 GDKQPTLFSYFGK 369

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465298|ref|XP_004150365.1| PREDICTED: LOW QUALITY PROTEIN: UPF0361 protein C3orf37 homolog, partial [Cucumis sativus]

 Score =  240 bits (613), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 115/157 (73%), Positives = 128/157 (81%), Gaps = 1/157 (0%)

Query: 17  FYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHD 76
           FYEWKKDG KKQPYY+HFKDG+PL  AALYD W++ EGE+LYTFTILTTSSS AL+WLHD
Sbjct: 114 FYEWKKDGXKKQPYYIHFKDGQPLALAALYDCWENLEGELLYTFTILTTSSSPALKWLHD 173

Query: 77  RMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIP 136
           RMPVILGDKE  D WLN SSSSKYD++LKPYE  DLVWYPVTP+MGK SFDGP+CIKEI 
Sbjct: 174 RMPVILGDKERMDMWLNDSSSSKYDSVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQ 233

Query: 137 LKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVK 173
           LK +G N IS FF  KE KKE  S   EK+  + SVK
Sbjct: 234 LKNDGSNLISKFFSAKETKKEY-SVSQEKTCSNTSVK 269

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449516117|ref|XP_004165094.1| PREDICTED: UPF0361 protein C3orf37 homolog [Cucumis sativus]

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 109/144 (75%), Positives = 121/144 (84%)

Query: 17  FYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHD 76
           FYEWKKDGSKKQPYY+HFKDG+PL  AALYD W++ EGE+LYTFTILTTSSS AL+WLHD
Sbjct: 114 FYEWKKDGSKKQPYYIHFKDGQPLALAALYDCWENLEGELLYTFTILTTSSSPALKWLHD 173

Query: 77  RMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIP 136
           RMPVILGDKE  D WLN SSSSKYD++LKPYE  DLVWYPVTP+MGK SFDGP+CIKEI 
Sbjct: 174 RMPVILGDKERMDMWLNDSSSSKYDSVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQ 233

Query: 137 LKTEGKNPISNFFLKKEIKKEQES 160
           LK +G N IS FF  KE K+   S
Sbjct: 234 LKNDGSNLISKFFSAKETKRNIRS 257

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30683129|ref|NP_180215.2| uncharacterized protein [Arabidopsis thaliana] gi|26449484|dbj|BAC41868.1| unknown protein [Arabidopsis thaliana] gi|29028900|gb|AAO64829.1| At2g26470 [Arabidopsis thaliana] gi|330252748|gb|AEC07842.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 114/187 (60%), Positives = 136/187 (72%), Gaps = 10/187 (5%)

Query: 5   FRALLDFNLLL----RFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTF 60
           FR LL  N  L     FYEWKK+GSKKQPYY+HF+DGRPLVFAAL+DTWQ+S GE LYTF
Sbjct: 99  FRRLLPKNRCLVAVDGFYEWKKEGSKKQPYYIHFEDGRPLVFAALFDTWQNSGGETLYTF 158

Query: 61  TILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPA 120
           TILTT+SS+ALQWLHDRMPVILGDK+S D WL+  S++K   +L PYE+SDLVWYPVT A
Sbjct: 159 TILTTASSSALQWLHDRMPVILGDKDSIDTWLDDPSTTKLQPLLSPYEKSDLVWYPVTSA 218

Query: 121 MGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVKTNLPKRM 180
           +GK +FDGPECI++IPLKT   + IS FF  K      + K DE     +S   N+   +
Sbjct: 219 IGKPTFDGPECIQQIPLKTSQNSLISKFFSTK------QPKTDEGDKETKSTDANIIVDL 272

Query: 181 KGEPIKE 187
           K EP  E
Sbjct: 273 KKEPTAE 279

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2739372|gb|AAC14496.1| hypothetical protein [Arabidopsis thaliana]

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 114/187 (60%), Positives = 136/187 (72%), Gaps = 10/187 (5%)

Query: 5   FRALLDFNLLL----RFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTF 60
           FR LL  N  L     FYEWKK+GSKKQPYY+HF+DGRPLVFAAL+DTWQ+S GE LYTF
Sbjct: 129 FRRLLPKNRCLVAVDGFYEWKKEGSKKQPYYIHFEDGRPLVFAALFDTWQNSGGETLYTF 188

Query: 61  TILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPA 120
           TILTT+SS+ALQWLHDRMPVILGDK+S D WL+  S++K   +L PYE+SDLVWYPVT A
Sbjct: 189 TILTTASSSALQWLHDRMPVILGDKDSIDTWLDDPSTTKLQPLLSPYEKSDLVWYPVTSA 248

Query: 121 MGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVKTNLPKRM 180
           +GK +FDGPECI++IPLKT   + IS FF  K      + K DE     +S   N+   +
Sbjct: 249 IGKPTFDGPECIQQIPLKTSQNSLISKFFSTK------QPKTDEGDKETKSTDANIIVDL 302

Query: 181 KGEPIKE 187
           K EP  E
Sbjct: 303 KKEPTAE 309

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	303
TAIR|locus:2066241	487	AT2G26470 "AT2G26470" [Arabido	0.792	0.492	0.484	2.5e-56
UNIPROTKB|Q74H52	223	GSU0040 "Uncharacterized prote	0.429	0.582	0.424	2e-24
TIGR_CMR|GSU_0040	223	GSU_0040 "conserved hypothetic	0.429	0.582	0.424	2e-24
ASPGD|ASPL0000013479	388	AN4161 [Emericella nidulans (t	0.455	0.355	0.46	5.3e-24
SGD|S000004720	368	YMR114C "Protein of unknown fu	0.749	0.616	0.312	1.1e-21
UNIPROTKB|Q3ABM4	224	CHY_1639 "Putative uncharacter	0.389	0.526	0.380	5.7e-20
TIGR_CMR|CHY_1639	224	CHY_1639 "conserved hypothetic	0.389	0.526	0.380	5.7e-20
UNIPROTKB|Q0C2F1	224	HNE_1375 "Putative uncharacter	0.382	0.517	0.336	6.9e-14
ZFIN|ZDB-GENE-070620-10	353	zgc:165500 "zgc:165500" [Danio	0.455	0.390	0.291	8.6e-13
UNIPROTKB|Q5LPE7	221	SPO2901 "Uncharacterized prote	0.376	0.515	0.330	1e-12

TAIR|locus:2066241 AT2G26470 "AT2G26470" [Arabidopsis thaliana (taxid:3702)]

 Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
 Identities = 126/260 (48%), Positives = 169/260 (65%)

Query:     5 FRALLDFNLLL----RFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTF 60
             FR LL  N  L     FYEWKK+GSKKQPYY+HF+DGRPLVFAAL+DTWQ+S GE LYTF
Sbjct:    99 FRRLLPKNRCLVAVDGFYEWKKEGSKKQPYYIHFEDGRPLVFAALFDTWQNSGGETLYTF 158

Query:    61 TILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPA 120
             TILTT+SS+ALQWLHDRMPVILGDK+S D WL+  S++K   +L PYE+SDLVWYPVT A
Sbjct:   159 TILTTASSSALQWLHDRMPVILGDKDSIDTWLDDPSTTKLQPLLSPYEKSDLVWYPVTSA 218

Query:   121 MGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDESVKTNLPKRM 180
             +GK +FDGPECI++IPLKT   + IS FF  K+ K ++  K  E  S D ++  +L K  
Sbjct:   219 IGKPTFDGPECIQQIPLKTSQNSLISKFFSTKQPKTDEGDK--ETKSTDANIIVDLKK-- 274

Query:   181 KGXXXXXXXXXXVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQSSVEKGDPDTKSV 240
             +           +  +EE         +N+ K+++ + +    ++ +  VE    D  +V
Sbjct:   275 EPTAEKDTFSDSIKKIEELDG--EKDMSNVAKNLEFQEI----VKAEPFVE----DNSAV 324

Query:   241 ASVLSDEDTKKELQKRDYKE 260
             AS+   E  K ++Q+   +E
Sbjct:   325 ASL--PEPVKNDVQEGTKEE 342

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q74H52 GSU0040 "Uncharacterized protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 56/132 (42%), Positives = 84/132 (63%)

Query:     5 FRALLDFNLLLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILT 64
             FR+     L   FYEWK +G++KQP Y+H KDG P+VFA L+++W+S EG I+ + TILT
Sbjct:    90 FRSRRCLVLASGFYEWKAEGNRKQPLYIHMKDGGPMVFAGLWESWKSPEGAIVESCTILT 149

Query:    65 TSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDT-ILKPYEESDLVWYPVTPAMGK 123
             T S++ ++ LHDRMPVILG +   D WL+  ++S+  T + +PY    L  YPV   +  
Sbjct:   150 TYSNSLIRPLHDRMPVILG-RSDWDIWLSREATSEELTPLFQPYPSDLLAMYPVGTGVNS 208

Query:   124 LSFDGPECIKEI 135
                D P+ ++ +
Sbjct:   209 PRNDSPDLLEPL 220

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|GSU_0040 GSU_0040 "conserved hypothetical protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 56/132 (42%), Positives = 84/132 (63%)

Query:     5 FRALLDFNLLLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILT 64
             FR+     L   FYEWK +G++KQP Y+H KDG P+VFA L+++W+S EG I+ + TILT
Sbjct:    90 FRSRRCLVLASGFYEWKAEGNRKQPLYIHMKDGGPMVFAGLWESWKSPEGAIVESCTILT 149

Query:    65 TSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDT-ILKPYEESDLVWYPVTPAMGK 123
             T S++ ++ LHDRMPVILG +   D WL+  ++S+  T + +PY    L  YPV   +  
Sbjct:   150 TYSNSLIRPLHDRMPVILG-RSDWDIWLSREATSEELTPLFQPYPSDLLAMYPVGTGVNS 208

Query:   124 LSFDGPECIKEI 135
                D P+ ++ +
Sbjct:   209 PRNDSPDLLEPL 220

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ASPGD|ASPL0000013479 AN4161 [Emericella nidulans (taxid:162425)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 69/150 (46%), Positives = 91/150 (60%)

Query:    17 FYEWKKDG--SKKQ-PYYVHFKDGRPLVFAALYD--TWQSSEGEILYTFTILTTSSSAAL 71
             +YEW K G   K + P+Y   KDG  + FA L+D  T++ SE E LYTFTI+TTS+  +L
Sbjct:   144 YYEWLKKGPGGKDRIPHYTRRKDGDLMYFAGLWDCVTYEGSE-EKLYTFTIITTSARPSL 202

Query:    72 QWLHDRMPVILGDK-ESSDAWLNG---SSSSKYDTILKPYEESDLVWYPVTPAMGKLSFD 127
              WLHDRMPVIL  K E+ DAWL+    S S +   +LKPYE  +L  Y V   +GK+  +
Sbjct:   203 SWLHDRMPVILDPKTEAWDAWLDPKRTSWSKELQAVLKPYE-GELDCYQVPKEVGKVGNN 261

Query:   128 GPECIKEIPLKTEGKNPISNFFLKKEIKKE 157
              P  I  +  K E K+ I+NFFL  + K E
Sbjct:   262 SPNFIVPVDSK-ENKSNIANFFLNAKSKTE 290

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005840 "ribosome" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

SGD|S000004720 YMR114C "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 81/259 (31%), Positives = 134/259 (51%)

Query:    13 LLLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQ 72
             L+  ++EWK  G KK PY++  +DGR +  A +YD  +  +   LYTFTI+T      L+
Sbjct:   126 LMSGYFEWKTVGKKKTPYFISRRDGRLMFVAGMYDYVEKDD---LYTFTIITAQGPRELE 182

Query:    73 WLHDRMPVILGD-KESSDAWLNGS----SSSKYDTILKP-YEESDLVWYPVTPAMGKLSF 126
             WLH+RMP +L    ES DAW++      S+ +   +LKP Y+ES L +Y VT  +GK + 
Sbjct:   183 WLHERMPCVLEPGTESWDAWMDVDKTTWSTEELVKLLKPDYDESKLQFYQVTDDVGKTTN 242

Query:   127 DGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDE-SVKTNLPKRMKGXXX 185
              G   IK  PL  E  +  S   +K+E K+E   + D +   D   VK +  K +KG   
Sbjct:   243 TGERLIK--PLLKEDSDMFS---VKRE-KEEALLENDNEQGIDNRGVKGD--KSLKGEDV 294

Query:   186 XXXXXX----XVSGLEEKYSFDTTAQTNLPK--SVKDEAVTADDIRTQSSVEKGDPDTKS 239
                          GL++    +   +T LP+  S+ D  V  ++    S   +G+ + ++
Sbjct:   295 FNQKKSLKRNSYDGLKKN---EEQEETTLPEEGSIGDR-VKREEANL-SPKREGNREKRN 349

Query:   240 VASVLSDE-DT--KKELQK 255
             + ++L ++ D+  KK+++K
Sbjct:   350 IVNMLGNQKDSRGKKKIKK 368

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0005840 "ribosome" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q3ABM4 CHY_1639 "Putative uncharacterized protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 46/121 (38%), Positives = 73/121 (60%)

Query:    17 FYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHD 76
             FYEW+K G KK PY +  K+ +P  FA LYD WQ   G ++Y+ TI+TT ++  ++ +HD
Sbjct:   101 FYEWEKSGGKKIPYRIVLKNRKPFAFAGLYDIWQDPGGRMVYSCTIITTEANKLIRSIHD 160

Query:    77 RMPVILGDKESSDAWLN-GSSS-SKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKE 134
             RMPVIL + E+   WL+ G    +   ++L PY E ++  + V+  +     D P+CI+ 
Sbjct:   161 RMPVIL-NHEAISIWLDLGIKDVNLIKSLLTPYPEKEMDIFEVSSLVNSPQVDVPQCIEP 219

Query:   135 I 135
             +
Sbjct:   220 V 220

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CHY_1639 CHY_1639 "conserved hypothetical protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 46/121 (38%), Positives = 73/121 (60%)

Query:    17 FYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHD 76
             FYEW+K G KK PY +  K+ +P  FA LYD WQ   G ++Y+ TI+TT ++  ++ +HD
Sbjct:   101 FYEWEKSGGKKIPYRIVLKNRKPFAFAGLYDIWQDPGGRMVYSCTIITTEANKLIRSIHD 160

Query:    77 RMPVILGDKESSDAWLN-GSSS-SKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKE 134
             RMPVIL + E+   WL+ G    +   ++L PY E ++  + V+  +     D P+CI+ 
Sbjct:   161 RMPVIL-NHEAISIWLDLGIKDVNLIKSLLTPYPEKEMDIFEVSSLVNSPQVDVPQCIEP 219

Query:   135 I 135
             +
Sbjct:   220 V 220

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q0C2F1 HNE_1375 "Putative uncharacterized protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]

 Score = 181 (68.8 bits), Expect = 6.9e-14, P = 6.9e-14
 Identities = 40/119 (33%), Positives = 63/119 (52%)

Query:    17 FYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHD 76
             +YEW   G  K P+    ++ R    A L+D     +G  + +FTILTT  +     +HD
Sbjct:   109 YYEWSVQGKSKTPFAFRLRNRRLFCLAGLWDA-ALIDGSEIQSFTILTTKPNDFTAGIHD 167

Query:    77 RMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEI 135
             RMPVIL   E  D WL+ +S      + +P+   D+  +P+ PA+GK+S + P  + E+
Sbjct:   168 RMPVILRP-EDYDRWLDPASGDP-SGLFEPFPNEDMDAWPIGPAVGKVSNNYPGLLDEV 224

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-070620-10 zgc:165500 "zgc:165500" [Danio rerio (taxid:7955)]

 Score = 164 (62.8 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
 Identities = 42/144 (29%), Positives = 70/144 (48%)

Query:    38 RPLVFAALYDTWQSS-EGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSS 96
             R L  A L+D+W     GE LYT+T++T  +S  LQ +HDRMP +L  ++    WL+   
Sbjct:   183 RLLTIAGLFDSWTPPCGGETLYTYTVITVDASPNLQSIHDRMPAVLDGEDEVRRWLDFGE 242

Query:    97 SSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEI-P-LKTEGKNPISNFFLKKEI 154
                 + I     +S L ++PV+  +     + PEC++ + P +K   K   S+  +   +
Sbjct:   243 VKSLEAIKLLQPKSCLTFHPVSSLVNNSRNNSPECLQPVDPTIKKSTKPTASSKMMMSWL 302

Query:   155 KKEQESKMDEKSSFDESVKTNLPK 178
             K    +K   + S DE      P+
Sbjct:   303 KTASPTK---RKSPDEDTSDKGPE 323

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q5LPE7 SPO2901 "Uncharacterized protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 171 (65.3 bits), Expect = 1.0e-12, P = 1.0e-12
 Identities = 39/118 (33%), Positives = 63/118 (53%)

Query:    17 FYEWKKDGSK-KQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLH 75
             FYEW + G   + P+Y+H +DG P+ FA ++  W   E     T  I+TT+++  L  LH
Sbjct:   103 FYEWTRPGGDVRLPWYIHRRDGAPIAFAGIWQDW-GPEAARQPTCAIVTTAANRHLGQLH 161

Query:    76 DRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIK 133
              RMP+IL + +    WL G +      +++P  E  L ++ V PA+      GP+ I+
Sbjct:   162 HRMPLIL-EPDDWPLWL-GEAGHGAARLMQPGAEEVLDYHRVDPAVNSNRASGPDLIE 217

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00002557 hypothetical protein (367 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	303
pfam02586	200	pfam02586, DUF159, Uncharacterized ACR, COG2135	2e-39
COG2135	226	COG2135, COG2135, Uncharacterized conserved protei	6e-36
PRK09951	222	PRK09951, PRK09951, hypothetical protein; Provisio	3e-17

>gnl|CDD|217124 pfam02586, DUF159, Uncharacterized ACR, COG2135

 Score =  136 bits (344), Expect = 2e-39
 Identities = 51/113 (45%), Positives = 65/113 (57%), Gaps = 8/113 (7%)

Query: 17  FYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHD 76
           FYEWKK+G  KQPYY+   DG PL FA L++ W   +GE L +FTILTT ++  L  +HD
Sbjct: 96  FYEWKKEGGGKQPYYISLADGEPLAFAGLWERWNDPDGEELESFTILTTPANGLLAPIHD 155

Query: 77  RMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGP 129
           RMPVIL   E  DAWL+  +               L  YPV+P +  +  DGP
Sbjct: 156 RMPVIL-PPEDWDAWLDPENPEADA-------LLLLEAYPVSPRVNNVRNDGP 200

Length = 200

>gnl|CDD|225046 COG2135, COG2135, Uncharacterized conserved protein [Function unknown]

 Score =  128 bits (324), Expect = 6e-36
 Identities = 56/140 (40%), Positives = 78/140 (55%), Gaps = 6/140 (4%)

Query: 3   QMFRALLDFNLLL----RFYEWKK-DGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEIL 57
           + FRA       L     FYEW+K    KKQPY++  KDG    FA L++TW  + G+ L
Sbjct: 87  RSFRAAFQSRRCLVPADGFYEWRKEPKKKKQPYFIRRKDGALFFFAGLWETWFEAGGDEL 146

Query: 58  YTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPV 117
            +FTILTT ++  L  +HDRMPV+L   E  DAWL+  +  +   +L+P    DL  YPV
Sbjct: 147 ESFTILTTEANDLLAPIHDRMPVVL-APEDWDAWLDPKTPPELKELLRPLPADDLSAYPV 205

Query: 118 TPAMGKLSFDGPECIKEIPL 137
           +  +  +  DGPE I+   L
Sbjct: 206 STLVNNVKNDGPELIEPASL 225

Length = 226

>gnl|CDD|182162 PRK09951, PRK09951, hypothetical protein; Provisional

 Score = 78.7 bits (194), Expect = 3e-17
 Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 9/125 (7%)

Query: 16  RFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDT--WQSSEGEILYTFTILTTSSSAALQW 73
            ++EWKK+G KKQPY+++  DG+P+  AA+  T   +  E E    F I+T ++   L  
Sbjct: 102 GWFEWKKEGDKKQPYFIYRADGQPIFMAAIGSTPFERGDEAE---GFLIVTAAADQGLVD 158

Query: 74  LHDRMPVILGDKESSDAWLNGSSSSK-YDTILK--PYEESDLVWYPVTPAMGKLSFDGPE 130
           +HDR P++L   E++  W+    S K    I        +   W+PV+ A+G +   G E
Sbjct: 159 IHDRRPLVL-SPEAAREWMRQEISGKEASEIATSGCVPANQFTWHPVSRAVGNVKNQGAE 217

Query: 131 CIKEI 135
            I+ +
Sbjct: 218 LIQPV 222

Length = 222

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	303
KOG2618	366	consensus Uncharacterized conserved protein [Funct	100.0
COG2135	226	Uncharacterized conserved protein [Function unknow	100.0
PRK09951	222	hypothetical protein; Provisional	100.0
PF02586	208	DUF159: Uncharacterised ACR, COG2135; InterPro: IP	100.0

>KOG2618 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=2.1e-39  Score=306.33  Aligned_cols=150  Identities=44%  Similarity=0.746  Sum_probs=137.0

Q ss_pred             chhhHhHHhcCC----cceeeeeccCCCCceeEEEEeCCCCcEEEEEeeeeccCCCCceeeeEEEEecCCCcccccccCc
Q 022084            2 LQMFRALLDFNL----LLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDR   77 (303)
Q Consensus         2 kPsFR~af~~rR----AsGFYEW~~~~gkKqPY~I~~kDg~pL~~AGLwd~W~~~~Ge~l~SfTIITteAn~~Ls~IHdR   77 (303)
                      +.+||..+.++|    |+|||||+..+.+||||||++.||++|+|||||+.|++..|+.++||||||+.++..|+|||+|
T Consensus       111 sksfrrpl~KgRCvVl~dGfyEWkt~gskkqpYfI~f~dgRlL~mAglfD~wE~egGD~LYtfTIIT~qssk~LswlH~R  190 (366)
T KOG2618|consen  111 SKSFRRPLEKGRCVVLMDGFYEWKTVGSKKQPYFISFRDGRLLFMAGLFDYWEKEGGDDLYTFTIITAQSSKELSWLHER  190 (366)
T ss_pred             hhhhhccCCCCcEEEEecceeeeeeccccCCceEEEEecCceeEeeeehheecccCCceeEEEEEEEecCchHhHHHHhh
Confidence            568999999999    9999999999999999999999999999999999999988999999999999999999999999


Q ss_pred             ceEeeCCcchHhhhCCCCCchHHHHhcCCCCCCCceEeEcCCCCCCCCCCCcccccccccccCCCCcccccccch
Q 022084           78 MPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKK  152 (303)
Q Consensus        78 MPVIL~~~ed~d~WLdp~~~~e~~~LL~p~~~~~L~~yPVs~~VNn~rndgpecI~Pi~~k~~~k~~I~~FF~~~  152 (303)
                      ||+||...+.|+.|||-........|+-+|+...|.||+|+..|||.+|+||+||+||.+... ...++.||...
T Consensus       191 MPaILegees~d~WLDf~~tt~~eaLk~~yp~s~Lq~y~VTs~Vgkstn~geecikpi~l~~s-~~~~s~~~~t~  264 (366)
T KOG2618|consen  191 MPAILEGEESWDAWLDFDKTTWVEALKPDYPESKLQFYQVTSDVGKSTNTGEECIKPILLEDS-NDMFSVKRETE  264 (366)
T ss_pred             CceeecChhhHHhhhcCcccchhhhhcCCCcchheeEEEehhhhCCCCCCchhhhcccccccc-ccccccccccc
Confidence            999999889999999977654567778889999999999999999999999999999987654 34666666655

>COG2135 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=3.8e-39  Score=294.78  Aligned_cols=134  Identities=40%  Similarity=0.725  Sum_probs=125.3

Q ss_pred             chhhHhHHhcCC----cceeeeeccCCCC-ceeEEEEeCCCCcEEEEEeeeeccCCCCceeeeEEEEecCCCcccccccC
Q 022084            2 LQMFRALLDFNL----LLRFYEWKKDGSK-KQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHD   76 (303)
Q Consensus         2 kPsFR~af~~rR----AsGFYEW~~~~gk-KqPY~I~~kDg~pL~~AGLwd~W~~~~Ge~l~SfTIITteAn~~Ls~IHd   76 (303)
                      +|+||.||+++|    |+|||||+..+++ |+||||+++||.+|+|||||+.|....|..+.+|||||++||+.|++|||
T Consensus        86 ~~~Fr~a~~~~RCLVPadgFyEW~~~~~~~k~p~fi~~~dg~lf~fAGlw~~~~~~~~~~~~s~tilTt~an~~la~iHd  165 (226)
T COG2135          86 KRSFRAAFQSRRCLVPADGFYEWRKEPKKKKQPYFIRRKDGALFFFAGLWETWFEAGGDELESFTILTTEANDLLAPIHD  165 (226)
T ss_pred             cccchhhhhcCceEEEcCcceecccCCCcCCCceEEEcCCCCeEEEEEeccccccCCCCccceEEEEEccCchhhhhhhh
Confidence            689999999999    9999999987655 99999999999999999999999877788999999999999999999999


Q ss_pred             cceEeeCCcchHhhhCCCCCchHHHHhcCCCCCCCceEeEcCCCCCCCCCCCcccccccc
Q 022084           77 RMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIP  136 (303)
Q Consensus        77 RMPVIL~~~ed~d~WLdp~~~~e~~~LL~p~~~~~L~~yPVs~~VNn~rndgpecI~Pi~  136 (303)
                      ||||||. +++++.||++....++..||+|++.+.|.+|+|++.||+++|++|+||+|+.
T Consensus       166 RmpvVL~-~e~~~~WLd~~~~~e~~~Llrp~p~~~l~~~~vs~~Vn~~~n~~~el~~p~~  224 (226)
T COG2135         166 RMPVVLA-PEDWDAWLDPKTPPELKELLRPLPADDLSAYPVSTLVNNVKNDGPELIEPAS  224 (226)
T ss_pred             cCceecC-hhHHHHhhCCCCchHHHHhccCCCccceEEEEcccccCCcccCCcccccccc
Confidence            9999998 8999999999722468899999999999999999999999999999999975

>PRK09951 hypothetical protein; Provisional

Probab=100.00  E-value=1.8e-38  Score=289.61  Aligned_cols=132  Identities=30%  Similarity=0.564  Sum_probs=117.2

Q ss_pred             chhhHhHHhcCC----cceeeeeccCCCCceeEEEEeCCCCcEEEEEeeeeccCCCCceeeeEEEEecCCCcccccccCc
Q 022084            2 LQMFRALLDFNL----LLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDR   77 (303)
Q Consensus         2 kPsFR~af~~rR----AsGFYEW~~~~gkKqPY~I~~kDg~pL~~AGLwd~W~~~~Ge~l~SfTIITteAn~~Ls~IHdR   77 (303)
                      ||+||.+|++||    |+|||||++.+++||||||+++|+++|+|||||+.|.. .|+.+.||||||++||+.|++||||
T Consensus        84 k~~Fr~~~~~~RClIPa~GfyEW~~~~~~k~p~~i~~~d~~~l~~AGl~~~~~~-~~~~~~tftIlT~~a~~~~~~iH~R  162 (222)
T PRK09951         84 SRMFKPLWQHGRAICFADGWFEWKKEGDKKQPYFIYRADGQPIFMAAIGSTPFE-RGDEAEGFLIVTAAADQGLVDIHDR  162 (222)
T ss_pred             CHhHHHHHHcCcEEEEccceEEcccCCCCccceEEEeCCCCcEEEEEecccccC-CCCeeeEEEEEeCCCCcccccccCC
Confidence            799999999999    99999999887889999999999999999999986543 4667889999999999999999999


Q ss_pred             ceEeeCCcchHhhhCCCCCch-HHH--HhcCCCCCCCceEeEcCCCCCCCCCCCccccccc
Q 022084           78 MPVILGDKESSDAWLNGSSSS-KYD--TILKPYEESDLVWYPVTPAMGKLSFDGPECIKEI  135 (303)
Q Consensus        78 MPVIL~~~ed~d~WLdp~~~~-e~~--~LL~p~~~~~L~~yPVs~~VNn~rndgpecI~Pi  135 (303)
                      |||||. +++++.||+++... ++.  .++.+.+.+.|.+|||++.|||++|++|+||+|+
T Consensus       163 mPviL~-~~~~~~WL~~~~~~~~~~~~~~~~~~~~~~l~~~pVs~~Vn~~~~~~p~~i~p~  222 (222)
T PRK09951        163 RPLVLS-PEAAREWMRQEISGKEASEIATSGCVPANQFTWHPVSRAVGNVKNQGAELIQPV  222 (222)
T ss_pred             CceEeC-HhHHHHhcCCCCCchhhhHHhhccCCCccceEEEECCCccCCcCCCChHHhcCC
Confidence            999997 78999999997542 233  3355677789999999999999999999999985

>PF02586 DUF159: Uncharacterised ACR, COG2135; InterPro: IPR003738 This entry describes proteins of unknown function

Probab=100.00  E-value=1.9e-35  Score=264.96  Aligned_cols=122  Identities=40%  Similarity=0.740  Sum_probs=99.6

Q ss_pred             chhhHhHHhcCC----cceeeeec--cCCCCceeEEEEeCCCCcEEEEEeeeeccCCCCceeeeEEEEecCCCccccccc
Q 022084            2 LQMFRALLDFNL----LLRFYEWK--KDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLH   75 (303)
Q Consensus         2 kPsFR~af~~rR----AsGFYEW~--~~~gkKqPY~I~~kDg~pL~~AGLwd~W~~~~Ge~l~SfTIITteAn~~Ls~IH   75 (303)
                      +|+||.+|+++|    |+|||||+  ..+++|+||||+++|+++|+|||||+.|.+..|+.+.+|||||++||+.|++||
T Consensus        81 k~~fr~~~~~~RClVp~~gfyEW~~~~~~~~k~py~i~~~d~~~~~~AGl~~~~~~~~~~~~~~f~ilT~~a~~~~~~iH  160 (208)
T PF02586_consen   81 KPMFRDAFKRRRCLVPADGFYEWQPKKEKGKKQPYYIHRKDGEPFALAGLWDRWRDPDGEELYSFAILTTPANPEMAPIH  160 (208)
T ss_dssp             STTTHHHHCCGEEEEEESEEEEEEECCCTSSEEEEEEEETTSCCEEEEEEEEEEECTTSTCEEEEEEEEEEGCTCGCCTT
T ss_pred             hhhHhheecCcEEEEEeeeEEEeeeccccCCceeEEEEcCCCCeEEEEEEeeccccccccccceEEEEecCCChhhhhcc
Confidence            799999999889    99999999  777899999999999999999999999999888779999999999999999999


Q ss_pred             CcceEeeCCcchHhhhCCCCCchHHHHhcCCCCCCCceEeEcCCCCCCCCCCCc
Q 022084           76 DRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGP  129 (303)
Q Consensus        76 dRMPVIL~~~ed~d~WLdp~~~~e~~~LL~p~~~~~L~~yPVs~~VNn~rndgp  129 (303)
                      |||||||. +++++.||+++.......++..++..     ||++.|||++|+||
T Consensus       161 ~RmPviL~-~e~~~~WL~~~~~~~~~~~~~~~~~~-----~Vs~~Vn~~~n~~p  208 (208)
T PF02586_consen  161 DRMPVILP-PEDWDRWLDPDIPEEDALLLLLLPAE-----PVSTRVNNPRNNGP  208 (208)
T ss_dssp             SEEE-EES-HHHHHHHHHTTCHHHHHHHHHC---H-----E--CGCGSCT----
T ss_pred             CCeeEEEC-HHHHHHhcCCCCChHHHHHhcccCCC-----CcccccCCcccCCC
Confidence            99999997 89999999998753222222222211     99999999999997

; PDB: 2F20_A 1ZN6_A 2BDV_A 2ICU_B 2AEG_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	303
2icu_A	229	Crystal Structure Of Hypothetical Protein Yedk From		9e-11
2f20_A	240	X-Ray Crystal Structure Of Protein Bt_1218 From Bac		4e-09
2bdv_A	231	X-ray Crystal Structure Of Phage-related Protein Bb		2e-06

>pdb|2ICU|A Chain A, Crystal Structure Of Hypothetical Protein Yedk From Escherichia Coli Length = 229

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 17  FYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHD 76
           ++EWKK+G KKQP++++  DG+P+  AA+  T     G+    F I+T ++   L  +HD
Sbjct: 110 WFEWKKEGDKKQPFFIYRADGQPIFXAAIGST-PFERGDEAEGFLIVTAAADQGLVDIHD 168
Query: 77  RMPVILGDKESSDAWLNGSSSSKYDTILKP---YEESDLVWYPVTPAMGKLSFDGPECIK 133
           R P++L   E++  W     S K  + +        +   W+PV+ A+G +   G E I+
Sbjct: 169 RRPLVL-SPEAAREWXRQEISGKEASEIAASGCVPANQFSWHPVSRAVGNVKNQGAELIQ 227
Query: 134 EI 135
            +
Sbjct: 228 PV 229

>pdb|2F20|A Chain A, X-Ray Crystal Structure Of Protein Bt_1218 From Bacteroides Thetaiotaomicron. Northeast Structural Genomics Consortium Target Btr8. Length = 240

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Query: 17  FYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSE-GEILYTFTILTTSSSAALQWLH 75
           ++EW+ +G+ K PYY++ KD      A +YD W   + GE   TF+I+TT +++   ++ 
Sbjct: 110 YFEWRHEGANKIPYYIYVKDEPIFSXAGIYDRWLDKDTGEEHETFSIITTDTNSLTDYID 169
Query: 76  D---RMPVILGDKESSDAWLNGS-SSSKYDTILKPYE 108
           +   R P IL  +E  + WLN S S ++  ++LKP++
Sbjct: 170 NTKHRXPAILT-QEEEEKWLNPSLSKAEIASLLKPFD 205

>pdb|2BDV|A Chain A, X-ray Crystal Structure Of Phage-related Protein Bb2244 From Bordetella Bronchiseptica. Northeast Structural Genomics Consortium Target Bor24 Length = 231

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 17  FYEWKK--DGSK--KQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQ 72
           +YEWK    G K  KQPYY+H     PL+FA L    + +E +  + F I+T  +   + 
Sbjct: 102 WYEWKALDSGPKPAKQPYYIH--GDAPLLFAGLSAWRRGAELDEAHGFAIVTNDALGGMV 159
Query: 73  WLHDRMPVILGDKESSDAWLNGSSS-SKYDTILKP-YEESDLVWYPVTPAMGKLSFDGPE 130
            +HDR PV L   E +  W++ ++  ++   IL+    E+   WYPV   +G   +  P+
Sbjct: 160 DVHDRRPVAL-PPELAREWVDPATPVARAKEILRAGLPETAFSWYPVRQEVGSSKYQLPD 218
Query: 131 CI 132
            +
Sbjct: 219 AV 220

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	303
2icu_A	229	Hypothetical protein YEDK; structural genomics, PS	1e-49
2f20_A	240	Conserved hypothetical protein, with conserved dom	2e-48
2bdv_A	231	Phage-related conserved hypothetical protein, BB2;	1e-47
1zn6_A	227	Phage-related conserved hypothetical protein; nove	2e-38
2aeg_A	268	Hypothetical protein AGR_PAT_140; alpha-beta prote	2e-24
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>2icu_A Hypothetical protein YEDK; structural genomics, PSI, protein structure initiative, southeast collaboratory for structura genomics, secsg, riken; 1.60A {Escherichia coli} Length = 229

 Score =  163 bits (414), Expect = 1e-49
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 5/122 (4%)

Query: 17  FYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHD 76
           ++EWKK+G KKQP++++  DG+P+  AA+  T     G+    F I+T ++   L  +HD
Sbjct: 110 WFEWKKEGDKKQPFFIYRADGQPIFMAAIGSTP-FERGDEAEGFLIVTAAADQGLVDIHD 168

Query: 77  RMPVILGDKESSDAWLNGSSSSKYDT---ILKPYEESDLVWYPVTPAMGKLSFDGPECIK 133
           R P++L   E++  W+    S K  +          +   W+PV+ A+G +   G E I+
Sbjct: 169 RRPLVL-SPEAAREWMRQEISGKEASEIAASGCVPANQFSWHPVSRAVGNVKNQGAELIQ 227

Query: 134 EI 135
            +
Sbjct: 228 PV 229

>2f20_A Conserved hypothetical protein, with conserved domain; Q8A8E9_bactin, NESG, BTR8, structural genomics, PSI; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.303.1.1 Length = 240

 Score =  160 bits (407), Expect = 2e-48
 Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 6/132 (4%)

Query: 17  FYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSE-GEILYTFTILTTSSSAALQWL- 74
           ++EW+ +G+ K PYY++ KD      A +YD W   + GE   TF+I+TT +++   ++ 
Sbjct: 110 YFEWRHEGANKIPYYIYVKDEPIFSMAGIYDRWLDKDTGEEHETFSIITTDTNSLTDYID 169

Query: 75  --HDRMPVILGDKESSDAWLNGSSSSK-YDTILKPYEESDLVWYPVTPAMGKLSFDGPEC 131
               RMP IL  +E  + WLN S S     ++LKP++   +  Y +     K S + P  
Sbjct: 170 NTKHRMPAIL-TQEEEEKWLNPSLSKAEIASLLKPFDTEKMDAYVIRNDFLKKSPNDPTI 228

Query: 132 IKEIPLKTEGKN 143
           ++         +
Sbjct: 229 VQRALEHHHHHH 240

>2bdv_A Phage-related conserved hypothetical protein, BB2; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.20A {Bordetella bronchiseptica} SCOP: d.303.1.1 Length = 231

 Score =  158 bits (401), Expect = 1e-47
 Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 9/126 (7%)

Query: 17  FYEWKKDGS----KKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQ 72
           +YEWK   S     KQPYY+H     PL+FA L    + +E +  + F I+T  +   + 
Sbjct: 102 WYEWKALDSGPKPAKQPYYIHGDA--PLLFAGLSAWRRGAELDEAHGFAIVTNDALGGMV 159

Query: 73  WLHDRMPVILGDKESSDAWLNGSSSSK--YDTILKPYEESDLVWYPVTPAMGKLSFDGPE 130
            +HDR PV L   E +  W++ ++      + +     E+   WYPV   +G   +  P+
Sbjct: 160 DVHDRRPVAL-PPELAREWVDPATPVARAKEILRAGLPETAFSWYPVRQEVGSSKYQLPD 218

Query: 131 CIKEIP 136
            +  + 
Sbjct: 219 AVDPLL 224

>1zn6_A Phage-related conserved hypothetical protein; novel, structural genomics, PSI; 1.80A {Bordetella bronchiseptica} SCOP: d.303.1.1 Length = 227

 Score =  134 bits (338), Expect = 2e-38
 Identities = 29/113 (25%), Positives = 40/113 (35%), Gaps = 9/113 (7%)

Query: 17  FYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEIL--YTFTILTTSSSAALQWL 74
            YE      K  P      DG PL  A L+D ++++ GE +  YT   +        +  
Sbjct: 113 IYEPDWRSGKAVPTRFTRADGAPLGIAGLWDRYRNAAGEWIDSYTMLTINADDDPLFRDY 172

Query: 75  HD-----RMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMG 122
           H      RM VIL    +   WL    ++     L PY    LV   V     
Sbjct: 173 HQAGKEKRMVVIL-PDGAYGDWLTA-PATDTRDFLLPYPADRLVAAAVKLEHH 223

>2aeg_A Hypothetical protein AGR_PAT_140; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Agrobacterium tumefaciens str} SCOP: d.303.1.1 Length = 268

 Score = 98.8 bits (245), Expect = 2e-24
 Identities = 23/139 (16%), Positives = 53/139 (38%), Gaps = 16/139 (11%)

Query: 17  FYEW-----KKDGSKKQPYYVHFKDGRPLVFAALY-DTWQSSEG-----EILYTFTILTT 65
           F E      ++ G+    ++   +    + FA ++   W+S             +  LTT
Sbjct: 125 FAEPDPASKQEGGNVPNAWFARDEAKSLMFFAGIHVPQWKSVRKVRDGLTTDDLYGFLTT 184

Query: 66  SSSAALQWLHDR-MPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLV---WYPVTPAM 121
             +  ++ +H++ MPV+L  +E ++ W+          + +P     L+     P   ++
Sbjct: 185 DPNDLVKPIHEKAMPVLLLTREETEIWMRAPWDEA-KHLARPLPNDALIILSREPYGSSI 243

Query: 122 GKLSFDGPECIKEIPLKTE 140
              S +  E  + +    E
Sbjct: 244 VSKSGESEEQGRLLAAALE 262

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 7e-04
 Identities = 34/249 (13%), Positives = 67/249 (26%), Gaps = 86/249 (34%)

Query: 91  WLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTE-GKNPISNFF 149
           WLN  + +  +T+L+  +   L  Y + P          +    I L+    +  +    
Sbjct: 186 WLNLKNCNSPETVLEMLQ--KL-LYQIDPNWTSR----SDHSSNIKLRIHSIQAELRRLL 238

Query: 150 LKKEIKKE-------QESKMDEKSSFDESVKT-------NLPKRMKGEPIKEIK-EEPVS 194
             K  +         Q +K     +F+ S K         +   +       I  +    
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWN--AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 195 GLEEKYSFDTTAQ------TNLPK---------------SVKDEAVTADDIRT------- 226
            L          +       +LP+               S++D   T D+ +        
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT 356

Query: 227 ---QSSVEKGDPDT------------KSV---ASVLS---------------DEDTKKEL 253
              +SS+   +P               S      +LS               ++  K  L
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL 416

Query: 254 QKRDYKEFL 262
            ++  KE  
Sbjct: 417 VEKQPKEST 425

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	303
2f20_A	240	Conserved hypothetical protein, with conserved dom	100.0
2icu_A	229	Hypothetical protein YEDK; structural genomics, PS	100.0
2bdv_A	231	Phage-related conserved hypothetical protein, BB2;	100.0
2aeg_A	268	Hypothetical protein AGR_PAT_140; alpha-beta prote	100.0
1zn6_A	227	Phage-related conserved hypothetical protein; nove	100.0

>2f20_A Conserved hypothetical protein, with conserved domain; Q8A8E9_bactin, NESG, BTR8, structural genomics, PSI; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.303.1.1

Probab=100.00  E-value=1.7e-41  Score=310.88  Aligned_cols=135  Identities=30%  Similarity=0.577  Sum_probs=127.8

Q ss_pred             chhhHhHHhcCC----cceeeeeccCCCCceeEEEEeCCCCcEEEEEeeeeccCCC-CceeeeEEEEecCCCcccccccC
Q 022084            2 LQMFRALLDFNL----LLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSE-GEILYTFTILTTSSSAALQWLHD   76 (303)
Q Consensus         2 kPsFR~af~~rR----AsGFYEW~~~~gkKqPY~I~~kDg~pL~~AGLwd~W~~~~-Ge~l~SfTIITteAn~~Ls~IHd   76 (303)
                      ||+||.+|++||    |+|||||+..+|+||||||+++|+++|+|||||+.|.+++ |+.+.|||||||+||+.|++||+
T Consensus        91 kp~fr~~~~~~RClVPa~gfyEw~~~~g~k~p~~i~~~d~~~~~~AGlw~~w~~~~~g~~~~sftiiTt~an~~~~~iH~  170 (240)
T 2f20_A           91 KPSFREPIMKKRCIVPSTGYFEWRHEGANKIPYYIYVKDEPIFSMAGIYDRWLDKDTGEEHETFSIITTDTNSLTDYIDN  170 (240)
T ss_dssp             CTTTTTHHHHCEEEEEESEEEEEEEETTEEEEEEEEETTCSSEEEEEEEEEEECTTTCCEEEEEEEEEEECCHHHHHHST
T ss_pred             chhHHHHhhCCeEEEEeceeEEcccCCCCceEEEEEcCCCCcEEEEEEeeeccCCCCCcccceEEEEEccCChhhhhccC
Confidence            699999999999    9999999998889999999999999999999999999877 88899999999999999999999


Q ss_pred             ---cceEeeCCcchHhhhCCCCCc-hHHHHhcCCCCCCCceEeEcCCCCCCCCCCCccccccccc
Q 022084           77 ---RMPVILGDKESSDAWLNGSSS-SKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPL  137 (303)
Q Consensus        77 ---RMPVIL~~~ed~d~WLdp~~~-~e~~~LL~p~~~~~L~~yPVs~~VNn~rndgpecI~Pi~~  137 (303)
                         ||||||. +++++.||++... +++..||+|++.+.|.+|||++.|||++|++|+||+|+..
T Consensus       171 ~~KRmPviL~-~e~~~~WL~~~~~~~~~~~ll~p~p~~~l~~~pVs~~Vn~~~n~~p~~i~p~~~  234 (240)
T 2f20_A          171 TKHRMPAILT-QEEEEKWLNPSLSKAEIASLLKPFDTEKMDAYVIRNDFLKKSPNDPTIVQRALE  234 (240)
T ss_dssp             TTCEEECEEC-GGGHHHHTCTTCCHHHHHHTCCCCCGGGEEEEEBCGGGGGSCTTCGGGGCBCCC
T ss_pred             CcceeEEEeC-HHHHHHhcCCCCcHHHHHHHcccCCCCcEEEEECCCccCCcCCCChhHhchhhh
Confidence               9999997 8999999999875 4689999999999999999999999999999999999964

>2icu_A Hypothetical protein YEDK; structural genomics, PSI, protein structure initiative, southeast collaboratory for structura genomics, secsg, riken; 1.60A {Escherichia coli}

Probab=100.00  E-value=1.2e-41  Score=309.84  Aligned_cols=132  Identities=30%  Similarity=0.566  Sum_probs=116.4

Q ss_pred             chhhHhHHhcCC----cceeeeeccCCCCceeEEEEeCCCCcEEEEEeeeeccCCCCceeeeEEEEecCCCcccccccCc
Q 022084            2 LQMFRALLDFNL----LLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDR   77 (303)
Q Consensus         2 kPsFR~af~~rR----AsGFYEW~~~~gkKqPY~I~~kDg~pL~~AGLwd~W~~~~Ge~l~SfTIITteAn~~Ls~IHdR   77 (303)
                      ||+||.+|+++|    |+|||||+..+++||||||+++|+++|+|||||+.|.+ +|+.+.|||||||+||+.|++||||
T Consensus        91 kp~fr~~~~~~RClVPa~gfyEw~~~~~~k~p~~i~~~d~~~~~~AGlw~~w~~-~g~~~~sftilTt~an~~~~~iH~R  169 (229)
T 2icu_A           91 SRMFKPLWQHGRAICFADGWFEWKKEGDKKQPFFIYRADGQPIFMAAIGSTPFE-RGDEAEGFLIVTAAADQGLVDIHDR  169 (229)
T ss_dssp             CTTTHHHHHHCEEEEEESEEEEEC------CEEEEEETTCCCEEEEEEECSCGG-GCCSSBCEEEEEEECCGGGGGTCSE
T ss_pred             chhHHhhhcCCcEEEEcceEEEcccCCCCceEEEEEecCCCcEEEEEeeecccC-CCCcCceEEEEeecCchhhhcccCc
Confidence            799999999999    99999999888899999999999999999999999876 5667789999999999999999999


Q ss_pred             ceEeeCCcchHhhhCCCCCc-hHHHHhc--CCCCCCCceEeEcCCCCCCCCCCCccccccc
Q 022084           78 MPVILGDKESSDAWLNGSSS-SKYDTIL--KPYEESDLVWYPVTPAMGKLSFDGPECIKEI  135 (303)
Q Consensus        78 MPVIL~~~ed~d~WLdp~~~-~e~~~LL--~p~~~~~L~~yPVs~~VNn~rndgpecI~Pi  135 (303)
                      |||||. +++++.||+++.. +++.+||  .+++.+.|.+|||++.|||++|++|+||+|+
T Consensus       170 mPviL~-~~~~~~WL~~~~~~~~a~~ll~~~~~p~~~l~~~pVs~~Vn~~~n~~p~li~p~  229 (229)
T 2icu_A          170 RPLVLS-PEAAREWMRQEISGKEASEIAASGCVPANQFSWHPVSRAVGNVKNQGAELIQPV  229 (229)
T ss_dssp             EECEEC-HHHHHHHHCTTCCHHHHHHHHHHHBCCGGGEEEEECCGGGGSTTCCCGGGGSCC
T ss_pred             eeEecC-HHHHHHhcCCCCCHHHHHHHHHhcCCCcccEEEEECCCCCCCcCCCChhhhcCC
Confidence            999997 8999999998754 4577777  5778889999999999999999999999986

>2bdv_A Phage-related conserved hypothetical protein, BB2; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.20A {Bordetella bronchiseptica} SCOP: d.303.1.1

Probab=100.00  E-value=2.1e-40  Score=302.37  Aligned_cols=129  Identities=28%  Similarity=0.553  Sum_probs=113.3

Q ss_pred             chh-hHhHHhcCC----cceeeeec---cCCCC-ceeEEEEeCCCCcEEEEEeeeeccCC-CCceeeeEEEEecCCCccc
Q 022084            2 LQM-FRALLDFNL----LLRFYEWK---KDGSK-KQPYYVHFKDGRPLVFAALYDTWQSS-EGEILYTFTILTTSSSAAL   71 (303)
Q Consensus         2 kPs-FR~af~~rR----AsGFYEW~---~~~gk-KqPY~I~~kDg~pL~~AGLwd~W~~~-~Ge~l~SfTIITteAn~~L   71 (303)
                      ||+ ||.+|++||    |+|||||+   ..+|+ ||||||++  +.+|+|||||+ |.++ +|+.+.|||||||+||+.|
T Consensus        82 kp~~Fr~~~~~~RClVPa~gfyEW~~~~~~~g~~k~p~~i~~--~~~~~~AGlw~-w~~~~~g~~~~sftiiTt~an~~~  158 (231)
T 2bdv_A           82 HGWPWKLMIGTGRILVPADGWYEWKALDSGPKPAKQPYYIHG--DAPLLFAGLSA-WRRGAELDEAHGFAIVTNDALGGM  158 (231)
T ss_dssp             TCTTGGGTTTTCEEEEEEEEEEEEEECSCSSSCCEEEEEEEE--EEEEEEEEEEC-CCTTCCSSGGGCEEEEECGGGCCS
T ss_pred             CchhhhHHhhcCeEEEEeccEEeccccccCCCCcceEEEEEC--CCceEEEEEeE-ecCCCCCceeeeEEEEecccChhh
Confidence            688 999999989    99999999   77788 99999999  78999999999 9987 6888899999999999999


Q ss_pred             ccccCcceEeeCCcchHhhhCCCCCc-----hHHHHhcCCCCCCCceEeEcCCCCCCCCCCCccccccccc
Q 022084           72 QWLHDRMPVILGDKESSDAWLNGSSS-----SKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPL  137 (303)
Q Consensus        72 s~IHdRMPVIL~~~ed~d~WLdp~~~-----~e~~~LL~p~~~~~L~~yPVs~~VNn~rndgpecI~Pi~~  137 (303)
                      ++|||||||||. +++++.||++...     +++ .||+|  .+.|.+|||++.|||++|++|+||+|+..
T Consensus       159 ~~iH~RmPviL~-~e~~~~WL~~~~~~~~~~~~~-~ll~p--~~~l~~~pVs~~Vn~~~n~~p~li~p~~~  225 (231)
T 2bdv_A          159 VDVHDRRPVALP-PELAREWVDPATPVARAKEIL-RAGLP--ETAFSWYPVRQEVGSSKYQLPDAVDPLLE  225 (231)
T ss_dssp             SCTTSCCBCBCC-HHHHHHHHCTTSCHHHHHHHH-TCCCC--GGGCEEEECCSCSCSBTTBCCC-------
T ss_pred             hcccCceeeecC-HHHHHHhcCCCCCCcchhhHH-HhcCC--cccEEEEECCCcCCCcCCCChHHhhhhhh
Confidence            999999999997 8999999999764     447 89999  67899999999999999999999999864

>2aeg_A Hypothetical protein AGR_PAT_140; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Agrobacterium tumefaciens str} SCOP: d.303.1.1

Probab=100.00  E-value=9.1e-35  Score=270.36  Aligned_cols=123  Identities=18%  Similarity=0.333  Sum_probs=111.4

Q ss_pred             chhhHhHH-hcCC----cceeeeecc---CCCCcee-EEEEeCCCC-cEEEEEeee-eccCC----CCc-eeeeEEEEec
Q 022084            2 LQMFRALL-DFNL----LLRFYEWKK---DGSKKQP-YYVHFKDGR-PLVFAALYD-TWQSS----EGE-ILYTFTILTT   65 (303)
Q Consensus         2 kPsFR~af-~~rR----AsGFYEW~~---~~gkKqP-Y~I~~kDg~-pL~~AGLwd-~W~~~----~Ge-~l~SfTIITt   65 (303)
                      +|+||.+| ++||    |+|||||..   .+|+||| |||+++|++ +|+|||||+ .|.++    +|+ .+.|||||||
T Consensus       105 kp~fr~a~~~~~RCLVPa~GFyEW~~~~~~~g~K~P~~~i~~~d~~pl~~~AGLw~~~w~~~~~~~~g~~~~~sftIiTt  184 (268)
T 2aeg_A          105 LPHWTRWFGVEHRCLVPVTSFAEPDPASKQEGGNVPNAWFARDEAKSLMFFAGIHVPQWKSVRKVRDGLTTDDLYGFLTT  184 (268)
T ss_dssp             CGGGGGGCSGGGEEEEEESEEEEECTTSCCTTSCCCEEEEESSTTCCCEEEEEEEEEEEEECSSGGGCSEEEEEEEEEEE
T ss_pred             ChHHHHHHhhCCeEEEEccEEEeecCccCCCCCcCccEEEEecCCCceEEEEEEeeccccccccccccccccceEEEEeC
Confidence            68999999 6888    999999998   6789999 999999998 699999999 99876    466 4899999999


Q ss_pred             CCCcccccccC-cceEee-CCcchHhhhCCCCCchHHHHhcCCCCCCCceEeEcCCCCCCCCC
Q 022084           66 SSSAALQWLHD-RMPVIL-GDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSF  126 (303)
Q Consensus        66 eAn~~Ls~IHd-RMPVIL-~~~ed~d~WLdp~~~~e~~~LL~p~~~~~L~~yPVs~~VNn~rn  126 (303)
                      +||+.|++||+ |||||| . +++++.||+++. +++..||+|++.+.|.+|||++.||++.+
T Consensus       185 ~an~~~~~iH~kRMPVIL~~-~e~~~~WL~~~~-~~~~~Ll~p~p~~~l~~~pV~~~v~~~~~  245 (268)
T 2aeg_A          185 DPNDLVKPIHEKAMPVLLLT-REETEIWMRAPW-DEAKHLARPLPNDALIILSREPYGSSIVS  245 (268)
T ss_dssp             CCCTTTTTTCSSCEECEECS-HHHHHHHHHSCH-HHHGGGCSCCCTTSCEEEEEECTTCCCC-
T ss_pred             CchHhhhhhCCCceeEEeCC-HHHHHHHcCCCh-HHHHHHcCCCCCccEEEEECCccCCCCcc
Confidence            99999999999 999999 6 799999999854 46899999999999999999999998877

>1zn6_A Phage-related conserved hypothetical protein; novel, structural genomics, PSI; 1.80A {Bordetella bronchiseptica} SCOP: d.303.1.1

Probab=100.00  E-value=1.7e-33  Score=255.81  Aligned_cols=115  Identities=30%  Similarity=0.474  Sum_probs=106.2

Q ss_pred             chhhHhHHhc-CC----cceeee--eccCCCCceeEEEEeCCCCcEEEEEeeeeccCCCCceeeeEEEEecCCCc--ccc
Q 022084            2 LQMFRALLDF-NL----LLRFYE--WKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSA--ALQ   72 (303)
Q Consensus         2 kPsFR~af~~-rR----AsGFYE--W~~~~gkKqPY~I~~kDg~pL~~AGLwd~W~~~~Ge~l~SfTIITteAn~--~Ls   72 (303)
                      ||+||.+|++ ||    |+||||  |..  |+||||||+++|+++|+|||||+.|.+++|+.+.|||||||+||.  .|+
T Consensus        93 kp~Fr~a~~~~~RClVPa~gFyE~~w~~--g~k~p~~i~~~d~~~l~~AGLw~~w~~~~g~~~~sftiiTt~an~~~~~~  170 (227)
T 1zn6_A           93 LWTFRNAWAKAQHCIIPADAIYEPDWRS--GKAVPTRFTRADGAPLGIAGLWDRYRNAAGEWIDSYTMLTINADDDPLFR  170 (227)
T ss_dssp             STTTHHHHHTTCEEEEEEEEEEEEECTT--SSCEEEEEEETTSCCEEEEEEEEEEECTTSCEEEEEEEEEEECTTCTTGG
T ss_pred             CchHHHHHhhCceEEEEeceeEeecccC--CCccceEEecCCCCcEEEEEEeeeccCCCCCeeeEEEEEeccCCCCchhh
Confidence            7999999998 78    999999  765  689999999999999999999999999888889999999999997  999


Q ss_pred             cccC-----cceEeeCCcchHhhhCCCCCchHHHHhcCCCCCCCceEeEcCCC
Q 022084           73 WLHD-----RMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPA  120 (303)
Q Consensus        73 ~IHd-----RMPVIL~~~ed~d~WLdp~~~~e~~~LL~p~~~~~L~~yPVs~~  120 (303)
                      +||+     ||||||. +++++.||++... ++..||+|++.+.|.+|||+..
T Consensus       171 ~iH~p~~~~RmPviL~-~e~~~~WL~~~~~-~~~~ll~p~p~~~l~~~pV~~~  221 (227)
T 1zn6_A          171 DYHQAGKEKRMVVILP-DGAYGDWLTAPAT-DTRDFLLPYPADRLVAAAVKLE  221 (227)
T ss_dssp             GCSCTTSCCEEECBCC-GGGHHHHHHCCGG-GHHHHCCCCCGGGEEEEECCC-
T ss_pred             hccCCCCCceeeEEeC-HHHHHHHcCCChH-HHHHHcccCCccccEEEECCHH
Confidence            9998     9999997 8999999999764 5899999999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	303
d2aega1	243	d.303.1.1 (A:2-244) Hypothetical protein Atu5096 {	2e-25
d2bdva1	217	d.303.1.1 (A:2-218) Phage-related hypothetical pro	1e-22
d2f20a1	231	d.303.1.1 (A:2-232) Hypothetical protein BT1218 {B	2e-20
d1zn6a1	218	d.303.1.1 (A:2-219) Phage-related hypothetical pro	5e-19

>d2aega1 d.303.1.1 (A:2-244) Hypothetical protein Atu5096 {Agrobacterium tumefaciens [TaxId: 358]} Length = 243

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Hypothetical protein Atu5096
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 99.6 bits (247), Expect = 2e-25
 Identities = 19/116 (16%), Positives = 43/116 (37%), Gaps = 13/116 (11%)

Query: 17  FYEW-----KKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSE------GEILYTFTILTT 65
           F E      ++ G+    ++   +    + FA ++     S             +  LTT
Sbjct: 124 FAEPDPASKQEGGNVPNAWFARDEAKSLMFFAGIHVPQWKSVRKVRDGLTTDDLYGFLTT 183

Query: 66  SSSAALQWLHDR-MPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPA 120
             +  ++ +H++ MPV+L  +E ++ W+          + +P     L+     P 
Sbjct: 184 DPNDLVKPIHEKAMPVLLLTREETEIWMRAPWDEAKH-LARPLPNDALIILSREPY 238

>d2bdva1 d.303.1.1 (A:2-218) Phage-related hypothetical protein BB2244 {Bordetella bronchiseptica [TaxId: 518]} Length = 217

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Phage-related hypothetical protein BB2244
species: Bordetella bronchiseptica [TaxId: 518]

 Score = 91.6 bits (226), Expect = 1e-22
 Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 5/118 (4%)

Query: 17  FYEWKKD--GSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWL 74
           +YEWK    G K      +     PL+FA L    + +E +  + F I+T  +   +  +
Sbjct: 101 WYEWKALDSGPKPAKQPYYIHGDAPLLFAGLSAWRRGAELDEAHGFAIVTNDALGGMVDV 160

Query: 75  HDRMPVILGDKESSDAWLNGSSSSKY--DTILKPYEESDLVWYPVTPAMGKLSFDGPE 130
           HDR PV L   E +  W++ ++      + +     E+   WYPV   +G   +  P+
Sbjct: 161 HDRRPVAL-PPELAREWVDPATPVARAKEILRAGLPETAFSWYPVRQEVGSSKYQLPD 217

>d2f20a1 d.303.1.1 (A:2-232) Hypothetical protein BT1218 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 231

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Hypothetical protein BT1218
species: Bacteroides thetaiotaomicron [TaxId: 818]

 Score = 85.7 bits (211), Expect = 2e-20
 Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 17  FYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSS----EGEILYTFTILTTSSSAALQ 72
           ++EW+ +G+ K PYY++ KD      A +YD W       E E     T  T S +  + 
Sbjct: 109 YFEWRHEGANKIPYYIYVKDEPIFSMAGIYDRWLDKDTGEEHETFSIITTDTNSLTDYID 168

Query: 73  WLHDRMPVILGDKESSDAWLNGS-SSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPEC 131
               RMP I   +E  + WLN S S ++  ++LKP++   +  Y +     K S + P  
Sbjct: 169 NTKHRMPAI-LTQEEEEKWLNPSLSKAEIASLLKPFDTEKMDAYVIRNDFLKKSPNDPTI 227

Query: 132 IK 133
           ++
Sbjct: 228 VQ 229

>d1zn6a1 d.303.1.1 (A:2-219) Phage-related hypothetical protein BB1717 {Bordetella bronchiseptica [TaxId: 518]} Length = 218

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Phage-related hypothetical protein BB1717
species: Bordetella bronchiseptica [TaxId: 518]

 Score = 81.6 bits (200), Expect = 5e-19
 Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 9/108 (8%)

Query: 17  FYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAA------ 70
            YE      K  P      DG PL  A L+D ++++ GE + ++T+LT ++         
Sbjct: 112 IYEPDWRSGKAVPTRFTRADGAPLGIAGLWDRYRNAAGEWIDSYTMLTINADDDPLFRDY 171

Query: 71  -LQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPV 117
                  RM VIL    +   WL   ++   D  L PY    LV   V
Sbjct: 172 HQAGKEKRMVVIL-PDGAYGDWLTAPATDTRD-FLLPYPADRLVAAAV 217

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	303
d2f20a1	231	Hypothetical protein BT1218 {Bacteroides thetaiota	100.0
d2bdva1	217	Phage-related hypothetical protein BB2244 {Bordete	100.0
d1zn6a1	218	Phage-related hypothetical protein BB1717 {Bordete	99.98
d2aega1	243	Hypothetical protein Atu5096 {Agrobacterium tumefa	99.97

>d2f20a1 d.303.1.1 (A:2-232) Hypothetical protein BT1218 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Hypothetical protein BT1218
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=100.00  E-value=3.6e-38  Score=284.62  Aligned_cols=132  Identities=30%  Similarity=0.579  Sum_probs=122.9

Q ss_pred             chhhHhHHhcCC----cceeeeeccCCCCceeEEEEeCCCCcEEEEEeeeeccCCC-CceeeeEEEEecCCCc---cccc
Q 022084            2 LQMFRALLDFNL----LLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSE-GEILYTFTILTTSSSA---ALQW   73 (303)
Q Consensus         2 kPsFR~af~~rR----AsGFYEW~~~~gkKqPY~I~~kDg~pL~~AGLwd~W~~~~-Ge~l~SfTIITteAn~---~Ls~   73 (303)
                      ||+||.+|+++|    |+|||||+..+++|+||||+++|+++|+|||||+.|.+++ |+.+.+|+|||+.+++   .|++
T Consensus        90 kp~fr~a~~~~RClIPa~GfyEW~~~~~~k~py~~~~~d~~~~~~AGl~~~~~~~~~g~~~~t~~iiT~~a~~~~~~i~~  169 (231)
T d2f20a1          90 KPSFREPIMKKRCIVPSTGYFEWRHEGANKIPYYIYVKDEPIFSMAGIYDRWLDKDTGEEHETFSIITTDTNSLTDYIDN  169 (231)
T ss_dssp             CTTTTTHHHHCEEEEEESEEEEEEEETTEEEEEEEEETTCSSEEEEEEEEEEECTTTCCEEEEEEEEEEECCHHHHHHST
T ss_pred             CHhHHhhhhcCcEEEEeeeEEeecccCCccceeEEeccCCCceEEEEEeecccccccccccceeEEEecccchhhhhhcc
Confidence            799999999999    9999999999999999999999999999999999999864 7789999999999997   4677


Q ss_pred             ccCcceEeeCCcchHhhhCCCCCc-hHHHHhcCCCCCCCceEeEcCCCCCCCCCCCcccccc
Q 022084           74 LHDRMPVILGDKESSDAWLNGSSS-SKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKE  134 (303)
Q Consensus        74 IHdRMPVIL~~~ed~d~WLdp~~~-~e~~~LL~p~~~~~L~~yPVs~~VNn~rndgpecI~P  134 (303)
                      |||||||||. +++++.|||++.. .++..||+|++.+.|.+|||++.||+++||+|+||++
T Consensus       170 iH~RmPviL~-~~~~~~WL~~~~~~~~~~~ll~~~~~~~l~~~~Vs~~Vn~~~nn~p~lI~~  230 (231)
T d2f20a1         170 TKHRMPAILT-QEEEEKWLNPSLSKAEIASLLKPFDTEKMDAYVIRNDFLKKSPNDPTIVQR  230 (231)
T ss_dssp             TTCEEECEEC-GGGHHHHTCTTCCHHHHHHTCCCCCGGGEEEEEBCGGGGGSCTTCGGGGCB
T ss_pred             ccCCCceecC-HHHHHHHcCCCCCHHHHHHHhccCCccceEEEECchhhCCCCCCCHHHhcc
Confidence            7999999997 8899999999865 4688999999999999999999999999999999987

>d2bdva1 d.303.1.1 (A:2-218) Phage-related hypothetical protein BB2244 {Bordetella bronchiseptica [TaxId: 518]}

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Phage-related hypothetical protein BB2244
species: Bordetella bronchiseptica [TaxId: 518]

Probab=100.00  E-value=1.1e-34  Score=258.76  Aligned_cols=126  Identities=27%  Similarity=0.525  Sum_probs=110.6

Q ss_pred             ch-hhHhHHhcCC----cceeeeeccCC----CCceeEEEEeCCCCcEEEEEeeeeccCCCCceeeeEEEEecCCCcccc
Q 022084            2 LQ-MFRALLDFNL----LLRFYEWKKDG----SKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQ   72 (303)
Q Consensus         2 kP-sFR~af~~rR----AsGFYEW~~~~----gkKqPY~I~~kDg~pL~~AGLwd~W~~~~Ge~l~SfTIITteAn~~Ls   72 (303)
                      || +||.+|+.+|    |+|||||+..+    ++|+||||+  ++.+++|||||..|.+.+|+.+.||||||++|++.|+
T Consensus        81 k~~~f~~~~~~~RClVP~~gfyEW~~~~~~~~~~k~p~~~~--~~~~~~~ag~~~~~~~~~~~~~~sfailT~~a~~~~~  158 (217)
T d2bdva1          81 HGWPWKLMIGTGRILVPADGWYEWKALDSGPKPAKQPYYIH--GDAPLLFAGLSAWRRGAELDEAHGFAIVTNDALGGMV  158 (217)
T ss_dssp             TCTTGGGTTTTCEEEEEEEEEEEEEECSCSSSCCEEEEEEE--EEEEEEEEEEECCCTTCCSSGGGCEEEEECGGGCCSS
T ss_pred             CccccccccccceEEEEeeeEEEecccccCCccceeeeeee--ccchhheeeeeeccccccccccceeEEEeccccchhh
Confidence            56 6999999999    99999998753    357899987  4578999999998888888888999999999999999


Q ss_pred             cccCcceEeeCCcchHhhhCCCCCc-hHHHH-hcCCCCCCCceEeEcCCCCCCCCCCCcc
Q 022084           73 WLHDRMPVILGDKESSDAWLNGSSS-SKYDT-ILKPYEESDLVWYPVTPAMGKLSFDGPE  130 (303)
Q Consensus        73 ~IHdRMPVIL~~~ed~d~WLdp~~~-~e~~~-LL~p~~~~~L~~yPVs~~VNn~rndgpe  130 (303)
                      +|||||||||. +++++.|||++.. .++.. |+.|++.+.|.+|||++.|||++|++|+
T Consensus       159 ~iH~RmPviL~-~~~~~~WL~~~~~~~~~~~~l~~~~~~~~l~~~pVs~~Vn~~~n~~pe  217 (217)
T d2bdva1         159 DVHDRRPVALP-PELAREWVDPATPVARAKEILRAGLPETAFSWYPVRQEVGSSKYQLPD  217 (217)
T ss_dssp             CTTSCCBCBCC-HHHHHHHHCTTSCHHHHHHHHTCCCCGGGCEEEECCSCSCSBTTBCCC
T ss_pred             hhhcccCEEEC-HHHHHHHcCCCCCHHHHHHHhcCCCCcccEEEEECCchhCCCCCCCCC
Confidence            99999999997 8999999999865 34444 4567888899999999999999999996

>d1zn6a1 d.303.1.1 (A:2-219) Phage-related hypothetical protein BB1717 {Bordetella bronchiseptica [TaxId: 518]}

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Phage-related hypothetical protein BB1717
species: Bordetella bronchiseptica [TaxId: 518]

Probab=99.98  E-value=3.1e-33  Score=250.52  Aligned_cols=115  Identities=29%  Similarity=0.413  Sum_probs=104.5

Q ss_pred             chhhHhHH-hcCC----cceeeeeccCCCCceeEEEEeCCCCcEEEEEeeeeccCCCCceeeeEEEEecCCCc--ccccc
Q 022084            2 LQMFRALL-DFNL----LLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSA--ALQWL   74 (303)
Q Consensus         2 kPsFR~af-~~rR----AsGFYEW~~~~gkKqPY~I~~kDg~pL~~AGLwd~W~~~~Ge~l~SfTIITteAn~--~Ls~I   74 (303)
                      ||+||.+| +.||    |+|||||++.+|+|+||||+++|+++|+|||||+.|.+++|+.+.||||||+.|++  .|++|
T Consensus        92 k~~fr~a~~~~~RClVPa~gfyEw~~~~~~k~p~~i~~~d~~~~~~AGl~~~~~~~~g~~~~s~~ilt~~a~~~~~~~~i  171 (218)
T d1zn6a1          92 LWTFRNAWAKAQHCIIPADAIYEPDWRSGKAVPTRFTRADGAPLGIAGLWDRYRNAAGEWIDSYTMLTINADDDPLFRDY  171 (218)
T ss_dssp             STTTHHHHHTTCEEEEEEEEEEEEECTTSSCEEEEEEETTSCCEEEEEEEEEEECTTSCEEEEEEEEEEECTTCTTGGGC
T ss_pred             CchhhhhhhccceEEEEecEEEEcccCCCcceeeeeeecCCcceEEEEEEEeeeCCCCCeeeeEEEEeecccccchhhhh
Confidence            78999998 5578    99999999999999999999999999999999999999999999999999998875  56666


Q ss_pred             c-----CcceEeeCCcchHhhhCCCCCchHHHHhcCCCCCCCceEeEcC
Q 022084           75 H-----DRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVT  118 (303)
Q Consensus        75 H-----dRMPVIL~~~ed~d~WLdp~~~~e~~~LL~p~~~~~L~~yPVs  118 (303)
                      |     +||||||. +++++.||++... ++..||+|++.+.|.+|||-
T Consensus       172 H~~~~h~RmPviL~-~~~~~~WL~~~~~-~~~~ll~p~p~~~l~a~pV~  218 (218)
T d1zn6a1         172 HQAGKEKRMVVILP-DGAYGDWLTAPAT-DTRDFLLPYPADRLVAAAVK  218 (218)
T ss_dssp             SCTTSCCEEECBCC-GGGHHHHHHCCGG-GHHHHCCCCCGGGEEEEECC
T ss_pred             ccccccCCCcEEeC-HHHHHHhCCCCcc-cHHHHcccCCccceEEEEcC
Confidence            6     79999997 8999999998765 58899999999999999993

>d2aega1 d.303.1.1 (A:2-244) Hypothetical protein Atu5096 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: BB1717-like
superfamily: BB1717-like
family: BB1717-like
domain: Hypothetical protein Atu5096
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.97  E-value=7.2e-32  Score=243.47  Aligned_cols=122  Identities=16%  Similarity=0.306  Sum_probs=103.3

Q ss_pred             chhhHhHHh-cCC----cceeeeeccCC-----CCceeEEEEeCCCCcEEEEEeee-eccCC-----CCceeeeEEEEec
Q 022084            2 LQMFRALLD-FNL----LLRFYEWKKDG-----SKKQPYYVHFKDGRPLVFAALYD-TWQSS-----EGEILYTFTILTT   65 (303)
Q Consensus         2 kPsFR~af~-~rR----AsGFYEW~~~~-----gkKqPY~I~~kDg~pL~~AGLwd-~W~~~-----~Ge~l~SfTIITt   65 (303)
                      +|.||.++. .||    |+|||||+..+     .+|+||||+..|+.+|+|||||+ .|...     .|+.+.||||||+
T Consensus       104 ~~~~~~~~~~~rRClIPa~gfyEW~~~~~~~~~~~k~p~~i~~~d~~~~~~AGlw~~~w~~~~~~~~~~~~~~sftIiT~  183 (243)
T d2aega1         104 LPHWTRWFGVEHRCLVPVTSFAEPDPASKQEGGNVPNAWFARDEAKSLMFFAGIHVPQWKSVRKVRDGLTTDDLYGFLTT  183 (243)
T ss_dssp             CGGGGGGCSGGGEEEEEESEEEEECTTSCCTTSCCCEEEEESSTTCCCEEEEEEEEEEEEECSSGGGCSEEEEEEEEEEE
T ss_pred             cHhHhhhhccCCcEEEEeceEEEecccccccCCCCCCCEEEECCCCceeEEeeeeeecccCccccccCCcceeEEEEEec
Confidence            466666664 567    99999997643     35799999999999999999995 45432     3568999999999


Q ss_pred             CCCcccccccCc-ceEeeCCcchHhhhCCCCCchHHHHhcCCCCCCCceEeEcCCCCCCC
Q 022084           66 SSSAALQWLHDR-MPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKL  124 (303)
Q Consensus        66 eAn~~Ls~IHdR-MPVIL~~~ed~d~WLdp~~~~e~~~LL~p~~~~~L~~yPVs~~VNn~  124 (303)
                      +||+.|++|||| |||||.++++++.||+++. +++..||+|++.+.|.+|+|++.||++
T Consensus       184 ~An~~l~~iHdR~MPvIL~~~e~~~~WL~~~~-~e~~~ll~P~p~~~l~~~~vsp~vn~~  242 (243)
T d2aega1         184 DPNDLVKPIHEKAMPVLLLTREETEIWMRAPW-DEAKHLARPLPNDALIILSREPYGSSI  242 (243)
T ss_dssp             CCCTTTTTTCSSCEECEECSHHHHHHHHHSCH-HHHGGGCSCCCTTSCEEEEEECTTCCC
T ss_pred             cCcHHHHhhcCCCCceEECCHHHHHHHcCCCH-HHHHHHhccCCccceEEEeCCCCccCC
Confidence            999999999999 9999944788999999854 468899999999999999999999986