Citrus Sinensis ID: 022092

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300--
Protein Sequence
MGGDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRERAMAYAFSHQWRANPNPLGKYELGKADWGWSWKERWIAARPWEIRVPSPSISQKKVQRTQAGKSGKDSNSPTPKSSVSVKPSISNGKGTSKARRLSFPDAEKPSSSEGNTKAKEESSKKEQLAS
Secondary Structure (PSIPRED)
ccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHcccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mggdwfktfvcqkkvkvgsskqvkgssasakskgfkwkkplgkessifaigstlgmpveDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLeidwsggpeTMEEILSRINQREKAAVKRERAMAYAFSHqwranpnplgkyelgkadwgwswkerwiaarpweirvpspsisqkkvqrtqagksgkdsnsptpkssvsvkpsisngkgtskarrlsfpdaekpsssegntkakeesskkeqlas
Flexible Loop (DISEMBL)
mggdwfktfvcqkkvkvgsskqvkgssasakskgfkwkkplgkESSIFAIGSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKgtirlqgvsqrhsvqkqatttlsylhtWSKLQAEIRARRLCMVKEgrlrqkklenqlkldaklnsleidwsggpeTMEEILSRINQREKAAVKRERAMAYAfshqwranpnplGKYELGKADWGWSWKERWIAARPweirvpspsisqkkvqrtqagksgkdsnsptpkssvsvkpsisngkgtskarrlsfpdaekpsssegntkakeesskkeqlas
Low Complexity Region (SEG)
MGGDWFKTFVCQkkvkvgsskqvkgssasakskgfkwkkPLGKESSIFAIGSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRERAMAYAFSHQWRANPNPLGKYELGKADWGWSWKERWIAARPWEIRVPSPSISQKKVQRTQAGKSGKDsnsptpkssvsvkpsisnGKGTSKARRLSFPDAEKPSSSEGNTKAKEESSKKEQLAS
Disordered region (IsUnstruct)
****WFKTFVCQKKV*****************************SSIFAIGSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCMVKEGRLRQ**L**QLKLDAKLNSLEIDW*************************RAMAYAFSHQWRANPNPLGKYELGKADWGWSWKERWIAARPWEIRV******************************************************************************
Disordered Region (DISOPRED)
*GGDWFKT***************************************************DVAAIRIQTAFRAYKARKTFRRLKGTIRLQGV**********TTTLSYLHTWSKLQA*********************************************************************************************WKERWIA**************************************************************************************
Disordered Region (DISEMBL)
MGGDWFKTFVCQKKV*********************WKKPLGKESSIFAIGSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRL*************TTTLSYLHTWSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRERAMAYAFSHQWRANPNPLGKYELGKADWGWSWKERWIAARPWEIRVPSP***************************************************************************
Disordered Region (DISPRO)
***DWFK*FVCQKKV****************************************MPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLN**E*DWSGGPETMEEILSRINQREKAAVKRERAMAYAFSHQWRAN************DWGWSWKERWIAARPW**********************************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGGDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRERAMAYAFSHQWRANPNPLGKYELGKADWGWSWKERWIAARPWEIRVPSPSISQKKVQRTQAGKSGKDSNSPTPKSSVSVKPSISNGKGTSKARRLSFPDAEKPSSSEGNTKAKEESSKKEQLAS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	302	2.2.26 [Sep-21-2011]
Q9SF32	454	Protein IQ-DOMAIN 1 OS=Ar	no	no	0.612	0.407	0.341	8e-24
Q8LPG9	668	Protein IQ-DOMAIN 14 OS=A	no	no	0.533	0.241	0.335	7e-19
Q8L4D8	587	Protein IQ-DOMAIN 31 OS=A	no	no	0.649	0.333	0.285	6e-08

>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1

 Score =  111 bits (277), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 117/205 (57%), Gaps = 20/205 (9%)

Query: 59  EDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEI 118
           E+ AAI IQ+ FR + AR+  + ++G  RL+ + +   VQ+QA  TL  + T S++Q++I
Sbjct: 107 EEAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQI 166

Query: 119 RARRLCMVKEGRLRQKKLENQLKLDAK-LNSLEI--DWSGGPETMEEILSRINQREKAAV 175
           R+RR+ M +E + R K+L   L+  AK L  L+   +W+   ++ E++ + +  + +A +
Sbjct: 167 RSRRIRMSEENQARHKQL---LQKHAKELGGLKNGGNWNYSNQSKEQVEAGMLHKYEATM 223

Query: 176 KRERAMAYAFSHQ-----WRANPNPLGKYELGKADWGWSWKERWIAARPWE--------I 222
           +RERA+AYAF+HQ     +    NP+   +     WGWSW ERW+A RPWE         
Sbjct: 224 RRERALAYAFTHQQNLKSFSKTANPMF-MDPSNPTWGWSWLERWMAGRPWESSEKEQNTT 282

Query: 223 RVPSPSISQKKVQRTQAGKSGKDSN 247
              + S+     + +Q G++ K SN
Sbjct: 283 NNDNSSVKNSTNRNSQGGETAKSSN 307

Modulates expression of glucosinolate pathway genes. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1

 Score = 94.7 bits (234), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 100/185 (54%), Gaps = 24/185 (12%)

Query: 56  MPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQ 115
           +PV+  +A +IQ AFR Y ARK+FR LKG +RLQGV + +SV++Q    + Y+    ++Q
Sbjct: 318 LPVQHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQ 377

Query: 116 AEIRARRLCMVKEGRLRQKKLENQLKLD------AKLNSLEIDWSGGPETMEEILSRINQ 169
           ++I++RR+ M          LENQ +++      A   +   +W     T EE  SR  +
Sbjct: 378 SQIQSRRIKM----------LENQAQVEKDEAKWAASEAGNDNWDDSVLTKEERDSRSQR 427

Query: 170 REKAAVKRERAMAYAFSHQ-WRANPNPLGKYELGKADWGWSWKERWIAARPWEIRVPSPS 228
           +  A +KRER+MAYA+S + W+ +P            W W  ++  +A+       P+PS
Sbjct: 428 KTDAIIKRERSMAYAYSRKLWKNSPKSTQDNRSFPQWWNWVDRQNPLAS-------PAPS 480

Query: 229 ISQKK 233
            SQ +
Sbjct: 481 YSQPQ 485

May be involved in cooperative interactions with calmodulins or calmodulin-like proteins. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1

 Score = 58.5 bits (140), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 32/228 (14%)

Query: 60  DVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIR 119
           ++AA  +Q AFR Y AR+ F  LKG IRLQ + + H V++QA  TL  +    +LQA  R
Sbjct: 113 EIAATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQAFAR 172

Query: 120 ARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRER 179
            R         +R+  +  Q+    +L  L+ +    P               A +  ++
Sbjct: 173 GR--------EIRKSDIGVQVYRKCRLQLLQGNKLANP-------------TDAYLGIKK 211

Query: 180 AMAYAFSHQWRA-NPN--PLGKYELGKADWGWSWKERWIAARPWEIRVPSPSISQKKVQR 236
             A AF+ +  A +P   P+  Y+    +    W E W A+  W+  VP P   +K + R
Sbjct: 212 LTANAFAQKLLASSPKVLPVHAYDTSNPNSNLIWLENWSASCFWK-PVPQP---KKTISR 267

Query: 237 TQAGKSGKDSNSPTPKSSVSVKPSISNGKGTSKARRLSFPDAEKPSSS 284
               +   ++ S  PK SV   P+ SN + +S      F   EKP  S
Sbjct: 268 KPQNRLLVEAESAKPKKSVRKVPA-SNFESSSVQTSFEF---EKPKRS 311

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	302
224116948	312	predicted protein [Populus trichocarpa]	1.0	0.967	0.647	1e-103
225443514	306	PREDICTED: protein IQ-DOMAIN 1 [Vitis vi	0.960	0.947	0.625	6e-99
224079131	312	predicted protein [Populus trichocarpa]	1.0	0.967	0.631	9e-99
255563056	310	calmodulin binding protein, putative [Ri	0.993	0.967	0.632	5e-98
118489299	312	unknown [Populus trichocarpa x Populus d	1.0	0.967	0.625	3e-97
356549256	299	PREDICTED: protein IQ-DOMAIN 1-like [Gly	0.927	0.936	0.602	1e-87
449434304	326	PREDICTED: protein IQ-DOMAIN 1-like [Cuc	0.986	0.914	0.573	9e-86
356555392	308	PREDICTED: protein IQ-DOMAIN 1-like [Gly	0.927	0.909	0.574	7e-85
357446877	295	IQ domain-containing protein [Medicago t	0.947	0.969	0.590	3e-84
225461608	309	PREDICTED: protein IQ-DOMAIN 1 [Vitis vi	0.986	0.964	0.552	1e-83

>gi|224116948|ref|XP_002317436.1| predicted protein [Populus trichocarpa] gi|222860501|gb|EEE98048.1| predicted protein [Populus trichocarpa]

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/312 (64%), Positives = 242/312 (77%), Gaps = 10/312 (3%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGSTLG---- 55
           MG GDWFKT +  KKVK  SSKQ KGSS S KS GFKWK  L KES+ FA GS       
Sbjct: 1   MGSGDWFKTIISIKKVKDDSSKQAKGSSTSEKSNGFKWKHKLQKESASFANGSNRANPRF 60

Query: 56  --MPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSK 113
             MPVED+AA RIQTAFRAY+ARKT R LKG +RLQ ++Q +S +KQA TTL+YLH+WS+
Sbjct: 61  PDMPVEDLAATRIQTAFRAYRARKTLRCLKGKVRLQIITQNYSFKKQAATTLNYLHSWSQ 120

Query: 114 LQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKA 173
           +QA+IRARRL MV EGRLRQKKLENQLKL+AKL+ LE++WSGG ETME+IL+RI+QRE+A
Sbjct: 121 IQAQIRARRLFMVTEGRLRQKKLENQLKLEAKLHDLEVEWSGGCETMEKILARIHQREEA 180

Query: 174 AVKRERAMAYAFSHQWRANP-NPLG--KYELGKADWGWSWKERWIAARPWEIRVPSPSIS 230
           AVKRERAMAYAFSHQWRA+  + LG   YELGKA+WGWSWKERWIA RPWE RV + S+S
Sbjct: 181 AVKRERAMAYAFSHQWRASYGHDLGVVNYELGKANWGWSWKERWIATRPWESRVAAKSVS 240

Query: 231 QKKVQRTQAGKSGKDSNSPTPKSSVSVKPSISNGKGTSKARRLSFPDAEKPSSSEGNTKA 290
            KK++  QA K  + +  PT K+ VS KPS+ NGKGT  A+RLS+P AEK  S EG+ K+
Sbjct: 241 PKKMKGRQANKVDETTKLPTRKTPVSSKPSLFNGKGTPTAQRLSYPPAEKRVSLEGSIKS 300

Query: 291 KEESSKKEQLAS 302
              ++K+EQL S
Sbjct: 301 DAANNKREQLVS 312

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443514|ref|XP_002272018.1| PREDICTED: protein IQ-DOMAIN 1 [Vitis vinifera] gi|297740471|emb|CBI30653.3| unnamed protein product [Vitis vinifera]

 Score =  366 bits (940), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 195/312 (62%), Positives = 234/312 (75%), Gaps = 22/312 (7%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGST------ 53
           MG GDWFK  +  KKVK  +S++ KG+S  AKS GFKW+    K S+ F+ GST      
Sbjct: 1   MGSGDWFKAILSSKKVKGDNSRKTKGTSTDAKSNGFKWRSRTLKGSTGFSYGSTSGNPGV 60

Query: 54  LGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSK 113
           LG+PVED+AA RIQTAFRA+ ARKT RRLKG +RLQ ++Q   V+KQA+TTLSYL +WS+
Sbjct: 61  LGIPVEDIAATRIQTAFRAFMARKTLRRLKGIVRLQKLTQGDCVRKQASTTLSYLSSWSR 120

Query: 114 LQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKA 173
           +Q +IRARRLCMV EGR+RQKKLENQLKLDAKL+ LE++W GGPETMEEIL+RI  RE+A
Sbjct: 121 IQTQIRARRLCMVTEGRIRQKKLENQLKLDAKLHDLEVEWCGGPETMEEILARIYHREEA 180

Query: 174 AVKRERAMAYAFSHQWRAN------PNPLGKYELGKADWGWSWKERWIAARPWEIRVPSP 227
           AVKRERA+AYAFSHQWRAN      PN  G   L KA+WGWSW ERWIAARPWE RV   
Sbjct: 181 AVKRERALAYAFSHQWRANSGQNQGPNKSG---LSKANWGWSWMERWIAARPWESRV--- 234

Query: 228 SISQKKVQRTQAGKSGKDSNSPTPKSSVSVKPSISNGKGTSKARRLSFPDAEKPSSSEGN 287
            IS KK Q  Q  K GK+  SPT K  V+V P   NGKGT+KARRLS+P AEKP++ +GN
Sbjct: 235 HISPKKAQSRQKNKVGKNIISPTTKVPVTVNP---NGKGTTKARRLSYPSAEKPAARDGN 291

Query: 288 TKAKEESSKKEQ 299
            K +E ++K+EQ
Sbjct: 292 IKPEEVNAKEEQ 303

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079131|ref|XP_002305760.1| predicted protein [Populus trichocarpa] gi|222848724|gb|EEE86271.1| predicted protein [Populus trichocarpa]

 Score =  365 bits (938), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 197/312 (63%), Positives = 242/312 (77%), Gaps = 10/312 (3%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGST------ 53
           MG GDWFKT +  KKVK  SSKQ KGS+ SAKS GFKWK  L KES+IFA GS+      
Sbjct: 1   MGSGDWFKTMISMKKVKDDSSKQPKGSTTSAKSNGFKWKNKLRKESAIFANGSSRANPRF 60

Query: 54  LGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSK 113
           + MPVEDVAA +IQTAFRAY ARKT RRLKGT+RLQ +++ +SV+KQA TTL+Y+H+WS+
Sbjct: 61  IDMPVEDVAATQIQTAFRAYMARKTLRRLKGTVRLQIITKNYSVKKQAATTLNYIHSWSQ 120

Query: 114 LQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKA 173
           +QA+IRARRLCMV E RLRQKKLENQLKL+AKL+ LE++W GG +TMEE L+RI+ RE+A
Sbjct: 121 IQAQIRARRLCMVTESRLRQKKLENQLKLEAKLHDLEVEWCGGFDTMEETLARIHLREEA 180

Query: 174 AVKRERAMAYAFSHQWRANP-NPLG--KYELGKADWGWSWKERWIAARPWEIRVPSPSIS 230
           AVKRERAMAYAFSHQWRA+  + LG   +ELGKA+WGWSWKERWIAARPWE RVP  S S
Sbjct: 181 AVKRERAMAYAFSHQWRASSGHSLGLVNFELGKANWGWSWKERWIAARPWESRVPVKSAS 240

Query: 231 QKKVQRTQAGKSGKDSNSPTPKSSVSVKPSISNGKGTSKARRLSFPDAEKPSSSEGNTKA 290
            KKV+  QA K  +++   T K+ VS KPS+SNG+    ARRLS+P AEK ++ E + K+
Sbjct: 241 PKKVKNKQAKKVDENTKLQTKKTPVSSKPSLSNGRVNPTARRLSYPPAEKRATLERSIKS 300

Query: 291 KEESSKKEQLAS 302
              ++K+E   S
Sbjct: 301 DAANTKREHSVS 312

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563056|ref|XP_002522532.1| calmodulin binding protein, putative [Ricinus communis] gi|223538223|gb|EEF39832.1| calmodulin binding protein, putative [Ricinus communis]

 Score =  363 bits (932), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 193/305 (63%), Positives = 236/305 (77%), Gaps = 5/305 (1%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGSTLGMPVE 59
           MG GDWFKT +  KKVK  SSK+VK SSA+AKS GFKWK    K+S+       L MPVE
Sbjct: 1   MGSGDWFKTIISLKKVKDDSSKRVKDSSAAAKSNGFKWKNQPRKKSATSCNPRVLDMPVE 60

Query: 60  DVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIR 119
           D AA RIQTAFRAY ARK+  RLKG +RLQ ++Q +S++KQA TTL++LH+WSK+Q +IR
Sbjct: 61  DFAATRIQTAFRAYMARKSLHRLKGAVRLQNLTQNYSIKKQAATTLNHLHSWSKIQGQIR 120

Query: 120 ARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRER 179
            RR CMV+EGRLRQK+LENQLKL+A+L+ LE++WS G ETMEE L+RI+QRE+AAVKRER
Sbjct: 121 DRRHCMVREGRLRQKRLENQLKLEAELHHLEVEWSDGSETMEETLARIHQREEAAVKRER 180

Query: 180 AMAYAFSHQWRANPNP---LGKYELGKADWGWSWKERWIAARPWEIRVPSPSISQKKVQR 236
           AMAYAFSHQWRAN +    L  YELGKA+WGWSW ERWIAARPWE RVP+ SIS KKVQ 
Sbjct: 181 AMAYAFSHQWRANSSQYLGLVNYELGKANWGWSWTERWIAARPWESRVPAHSISPKKVQN 240

Query: 237 TQAGKSGKDSNSPT-PKSSVSVKPSISNGKGTSKARRLSFPDAEKPSSSEGNTKAKEESS 295
            QA K GK++ SPT  K+ +S K S+S+ + ++KARRLS+P AEK    EG+ K KE + 
Sbjct: 241 KQANKGGKNTKSPTITKTPLSSKQSLSSLRESTKARRLSYPAAEKRPILEGSIKTKEANP 300

Query: 296 KKEQL 300
           K EQ+
Sbjct: 301 KGEQI 305

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489299|gb|ABK96454.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  361 bits (926), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 195/312 (62%), Positives = 239/312 (76%), Gaps = 10/312 (3%)

Query: 1   MGG-DWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGST------ 53
           MG  DWFKT +  KKVK  SSKQ KG + SAKS GFKWK  L KES+IFA GS+      
Sbjct: 1   MGSVDWFKTMISMKKVKDDSSKQPKGCTTSAKSNGFKWKNKLRKESAIFANGSSRANPRF 60

Query: 54  LGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSK 113
           + MPVEDVAA +IQTAFRAY ARKT RRLKGT+RLQ +++ +SV+KQA TTL+YLH+WS+
Sbjct: 61  IDMPVEDVAATQIQTAFRAYMARKTLRRLKGTVRLQIITKNYSVKKQAATTLNYLHSWSQ 120

Query: 114 LQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKA 173
           +QA+IRARRLCMV E RLRQKKLENQLKL+AKL+ LE++W GG +TMEE L+RI+ RE+A
Sbjct: 121 IQAQIRARRLCMVTESRLRQKKLENQLKLEAKLHDLEVEWCGGFDTMEETLARIHLREEA 180

Query: 174 AVKRERAMAYAFSHQWRANP-NPLG--KYELGKADWGWSWKERWIAARPWEIRVPSPSIS 230
           AVKRERAMAYAFSHQWRA+  + LG   +ELGK +WGWSWKERWIAARPWE RVP  S S
Sbjct: 181 AVKRERAMAYAFSHQWRASSGHSLGLVNFELGKTNWGWSWKERWIAARPWESRVPVKSAS 240

Query: 231 QKKVQRTQAGKSGKDSNSPTPKSSVSVKPSISNGKGTSKARRLSFPDAEKPSSSEGNTKA 290
            KKV+  QA K  +++   T K+ VS KPS+SNG+    ARRLS+P AEK ++ E + K+
Sbjct: 241 PKKVKNKQAKKVDENTKLQTKKTPVSSKPSLSNGRVNPTARRLSYPPAEKGATLERSIKS 300

Query: 291 KEESSKKEQLAS 302
              ++K+E   S
Sbjct: 301 DAANTKREHSVS 312

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549256|ref|XP_003543012.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine max]

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 176/292 (60%), Positives = 213/292 (72%), Gaps = 12/292 (4%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGS------T 53
           MG GDWFKT +  +K K G SK+ KG  A  K    K     GKES   A G+      +
Sbjct: 1   MGSGDWFKTIISLRKSKQGRSKKAKGILAQEKLNASKSNSYPGKESGGLANGTKSENLVS 60

Query: 54  LGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSK 113
            G+ VE +AA RIQTAFRAYKARK  RR+KG  +L+ +++  SV+KQA+T ++YLH+WSK
Sbjct: 61  AGVSVETIAAKRIQTAFRAYKARKALRRMKGFTKLKILTEGFSVKKQASTAITYLHSWSK 120

Query: 114 LQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKA 173
           +Q EIRARR+CMV E ++R+KKLE+QLKL+AKL+ LE++W GG ET EEIL RI+ RE+A
Sbjct: 121 IQVEIRARRICMVTEDKIRRKKLESQLKLEAKLHDLEVEWCGGSETKEEILGRIHDREEA 180

Query: 174 AVKRERAMAYAFSHQWRANPNP---LGKYELGKADWGWSWKERWIAARPWEIRVPSPSIS 230
           AVKRERAMAYAFSHQWRAN +    LG YEL KA+WGWSWKERWIAARPWE RVPS SI+
Sbjct: 181 AVKRERAMAYAFSHQWRANSSQSQLLGNYELSKANWGWSWKERWIAARPWESRVPSLSIT 240

Query: 231 QKKVQRTQ--AGKSGKDSNSPTPKSSVSVKPSISNGKGTSKARRLSFPDAEK 280
            KK Q  Q    K  KD N+ TPK+ VSVKP  +N KGTSKARRLS+P  EK
Sbjct: 241 PKKSQHKQPSPSKVQKDKNTSTPKTPVSVKPPSANAKGTSKARRLSYPTTEK 292

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434304|ref|XP_004134936.1| PREDICTED: protein IQ-DOMAIN 1-like [Cucumis sativus]

 Score =  322 bits (826), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 180/314 (57%), Positives = 219/314 (69%), Gaps = 16/314 (5%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVK-----GSSASAKSKGFKWKKPLGKESSIF----AI 50
           MG G WFK  +  KKVK  SSKQ K        A A+S    +     K+S  F    A 
Sbjct: 1   MGSGRWFKAVIRLKKVKTSSSKQTKLGLVFFKLALARSSFHLYAFANLKDSPRFKSDGAN 60

Query: 51  GST--LGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYL 108
           G++  L MP+EDVAA+RIQTA+RAY+ARK  R LKG  RLQ ++Q HSV+K AT+TL YL
Sbjct: 61  GNSKSLSMPIEDVAAVRIQTAYRAYRARKNLRLLKGAFRLQNLTQGHSVRKHATSTLGYL 120

Query: 109 HTWSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRIN 168
           H+WS +QA+IRARRLCMV EGR RQK+LENQ KL+AKL+ +E++W GG ++M+ ILSRI+
Sbjct: 121 HSWSHIQAQIRARRLCMVTEGRQRQKRLENQRKLEAKLHDIEVEWCGGADSMDGILSRIH 180

Query: 169 QREKAAVKRERAMAYAFSHQWRANPNP---LGKYELGKADWGWSWKERWIAARPWEIRVP 225
            RE+AAVKRERAMAYAFSHQWRAN N    LGK ELGKADWGWSWKERWIAARPWE RVP
Sbjct: 181 DREEAAVKRERAMAYAFSHQWRANSNEMYGLGKDELGKADWGWSWKERWIAARPWESRVP 240

Query: 226 SPSISQKKVQRTQAGKSGKDSNSPTPKSSVSVKPSISNGKGTSKARRLSFPDAEKPSSSE 285
           S  +S KK    Q+ K  K  NSP+PK+   +KP   NGK ++KARRLS+P  EK     
Sbjct: 241 SQFVSPKKSTIRQSSKVSK-RNSPSPKARGPMKPPSPNGKSSAKARRLSYPATEKAEKLA 299

Query: 286 GNTKAKEESSKKEQ 299
              K  +ES K ++
Sbjct: 300 TQEKGVKESVKNDK 313

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555392|ref|XP_003546016.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine max]

 Score =  320 bits (819), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 173/301 (57%), Positives = 211/301 (70%), Gaps = 21/301 (6%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIG------ST 53
           MG GDWFKT +  +K K G SK+ KG     K    K     GKESS    G       +
Sbjct: 1   MGSGDWFKTIISLRKSKEGRSKKAKGILTQEKLNASKSNNYPGKESSGLTNGIKSENLVS 60

Query: 54  LGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSK 113
            G+ VE +AA RIQTAFRAYKARK  RR+KG  +L+ +++  SV+KQA+T ++YLH+WSK
Sbjct: 61  AGVSVETIAATRIQTAFRAYKARKALRRMKGFTKLKILTEGFSVKKQASTAVTYLHSWSK 120

Query: 114 LQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKA 173
           +QAEIRARR+CMV E R+R+KKLE+QLKL+AKL+ LE++W GG ETMEEIL RI+ RE+A
Sbjct: 121 IQAEIRARRICMVTEDRIRRKKLESQLKLEAKLHDLEVEWCGGSETMEEILGRIHHREEA 180

Query: 174 AVKRERAMAYAFSHQWRANPNP---LGKYELGKADWGWSWKERWIAARPWEIRVPSPSIS 230
           AVKRERAMAYAFSHQWRAN +    LG YEL KA+WGWSWKE WIAARPWE R+PS S++
Sbjct: 181 AVKRERAMAYAFSHQWRANSSQNQLLGNYELSKANWGWSWKECWIAARPWESRIPSLSVT 240

Query: 231 QKKVQRTQ--AGKSGKDSNSPTPKSSVSVK---------PSISNGKGTSKARRLSFPDAE 279
            +K Q  Q    K  KD N+ TPK+ VS K         P  +N KGTSKARRLS+P  E
Sbjct: 241 PEKAQHKQPSPSKVQKDKNTSTPKTPVSFKPPSANAKGTPPSANAKGTSKARRLSYPTTE 300

Query: 280 K 280
           K
Sbjct: 301 K 301

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446877|ref|XP_003593714.1| IQ domain-containing protein [Medicago truncatula] gi|355482762|gb|AES63965.1| IQ domain-containing protein [Medicago truncatula]

 Score =  317 bits (813), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 176/298 (59%), Positives = 210/298 (70%), Gaps = 12/298 (4%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIG---STLGM 56
           MG G WFK  V  +K K   SK+ KG+ +  K    K     GKE S  A G     LG 
Sbjct: 1   MGSGFWFKVIVSLRKSKDRRSKKSKGTLSPEKQSALKLNNYTGKEFSGLANGIQNENLG- 59

Query: 57  PVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQA 116
            VE +AA RIQTAFRAYKARK  RRLKG  +L+ +++ +SVQKQA+TT++YLH+WSK+Q 
Sbjct: 60  SVETIAATRIQTAFRAYKARKALRRLKGFTKLKILTEGYSVQKQASTTITYLHSWSKIQG 119

Query: 117 EIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVK 176
            IRARR+CMV E R+R+KK E+QLKL+ KL+  E++WSGGPETMEE L RI+QR +AAVK
Sbjct: 120 AIRARRVCMVTEDRIRRKKQESQLKLEEKLHDFEVEWSGGPETMEETLGRIHQRGEAAVK 179

Query: 177 RERAMAYAFSHQWRANPN-PLGKYELGKADWGWSWKERWIAARPWEIRVPSPSISQKKVQ 235
           RERAMAYAFSHQWRAN +  LG YELGKA WGWSWKERWIAARPWE RV   +IS KKVQ
Sbjct: 180 RERAMAYAFSHQWRANSSQSLGSYELGKASWGWSWKERWIAARPWESRV--ANISPKKVQ 237

Query: 236 RTQAGKSGKDSNSPTPKSSVSVKPSISNGKGT----SKARRLSFPDAEKPSSSEGNTK 289
             Q+ K  KD N+ T K+ VSV P  SN KGT    +KARRLS+P  EK  +  G  K
Sbjct: 238 NKQSYKVQKDKNTSTSKTPVSVTPPTSNAKGTPKVSTKARRLSYPTTEKEKTVVGGVK 295

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461608|ref|XP_002282973.1| PREDICTED: protein IQ-DOMAIN 1 [Vitis vinifera] gi|302142924|emb|CBI20219.3| unnamed protein product [Vitis vinifera]

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 173/313 (55%), Positives = 219/313 (69%), Gaps = 15/313 (4%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGSTLG---- 55
           MG G WFK  +  +KVK   SK  K  S + KS   K K  + KESS  A G+ LG    
Sbjct: 1   MGAGGWFKMIISLRKVKEDRSKPAKVHSTTEKSSNSKGKHHIDKESSSLANGA-LGKSAG 59

Query: 56  ---MPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWS 112
              +PVE+ AAI+IQT +RAYKARK   RL+GT+R Q ++Q   V+KQA+TTLSY+H WS
Sbjct: 60  VHKIPVEERAAIQIQTTYRAYKARKNLHRLRGTVRFQVMTQGDIVRKQASTTLSYIHAWS 119

Query: 113 KLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREK 172
           ++QA+I ARR CM +EGR+RQKKLENQLKL+AKL+ LE++W GG ETMEEILSRI QRE+
Sbjct: 120 RIQAQISARRHCMAQEGRVRQKKLENQLKLEAKLHELEVEWCGGSETMEEILSRIQQREE 179

Query: 173 AAVKRERAMAYAFSHQWRANPNP-LGK--YELGKADWGWSWKERWIAARPWEIRVPSPSI 229
           AAVKRERAMAYAFSHQWRAN +  LG   Y+LGK +WGWSW ERWIAARPWE RV + S 
Sbjct: 180 AAVKRERAMAYAFSHQWRANNSQYLGHTYYDLGKENWGWSWMERWIAARPWETRVHAQST 239

Query: 230 SQKKVQRTQAGKSGKDSNSPTPKSSVSVKPSISNGKGTSKARRLSFPDAEKPSSSEGNTK 289
             KK Q     K GK +N  T K+ V V+P++SNGKGT+K    +  +A   + S   ++
Sbjct: 240 LPKKAQTKHVIKVGKITNPQTMKTPVLVRPALSNGKGTTKP---AAQEAVTTAVSSSRSE 296

Query: 290 AKEESSKKEQLAS 302
           A+E ++K EQ+ +
Sbjct: 297 AEEANTKHEQIIT 309

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	302
TAIR|locus:2055430	263	iqd9 "AT2G33990" [Arabidopsis	0.741	0.851	0.526	1.3e-59
TAIR|locus:2086385	259	IQD10 "AT3G15050" [Arabidopsis	0.589	0.687	0.578	2.7e-52
TAIR|locus:2090409	422	IQD5 "AT3G22190" [Arabidopsis	0.546	0.390	0.429	1.2e-33
TAIR|locus:2057459	416	IQD6 "AT2G26180" [Arabidopsis	0.546	0.396	0.443	2.3e-32
TAIR|locus:2143503	461	iqd2 "AT5G03040" [Arabidopsis	0.791	0.518	0.316	1.9e-28
TAIR|locus:2100504	430	IQD3 "AT3G52290" [Arabidopsis	0.579	0.406	0.360	5e-28
TAIR|locus:2066226	527	Iqd4 "AT2G26410" [Arabidopsis	0.599	0.343	0.381	5.5e-27
TAIR|locus:2030225	414	iqd8 "AT1G72670" [Arabidopsis	0.602	0.439	0.345	6.6e-26
TAIR|locus:2097478	517	IQD13 "AT3G59690" [Arabidopsis	0.582	0.340	0.344	8.3e-24
TAIR|locus:2018837	371	IQD7 "AT1G17480" [Arabidopsis	0.456	0.371	0.346	3.9e-21

TAIR|locus:2055430 iqd9 "AT2G33990" [Arabidopsis thaliana (taxid:3702)]

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 121/230 (52%), Positives = 159/230 (69%)

Query:    51 GSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHT 110
             G++L    ED AA RIQTAF+AYKARK+ RRLKG  R +  +++ SV+ QA  TL YLH+
Sbjct:    38 GTSLVTRSEDWAATRIQTAFKAYKARKSLRRLKGIARAKLSTEKQSVKNQAVVTLRYLHS 97

Query:   111 WSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQR 170
             WSK+Q+EI+ARR+CMV E RL+ K+LE+Q KL+AKL+ +E++W+GG ET +EIL RI QR
Sbjct:    98 WSKIQSEIKARRVCMVTEWRLKNKRLEHQQKLEAKLHDVEVEWNGGSETKDEILERILQR 157

Query:   171 EKAAVKRERAMAYAFSHQWRANPNP--LGKYELGKADWGWSWKERWIAARPWEIRVPSPS 228
             E+A +KRERA+AYAFSHQW+A+     LG YELG  +WGWSWKERWI+ARPWE+R    S
Sbjct:   158 EEATIKRERALAYAFSHQWKADGKTQWLGSYELGNTNWGWSWKERWISARPWEVRY---S 214

Query:   229 ISQKKVQRTQAGKSGKDXXXXXXXXXXXXXXXXXXGKGTSKARRLSFPDA 278
             ++ KK + ++   S                      + T K RRLSFP A
Sbjct:   215 VTPKKPKSSKTD-SNSPAKRTVSLSSVPAKTPFPGARNTVKPRRLSFPGA 263

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2086385 IQD10 "AT3G15050" [Arabidopsis thaliana (taxid:3702)]

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 107/185 (57%), Positives = 134/185 (72%)

Query:    60 DVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIR 119
             +VA IRIQ AFRA+KARK    LK   R   + Q H+V  Q +T L+ +H+W  +Q +IR
Sbjct:    50 EVAVIRIQKAFRAFKARKRLCSLKSARRFNSLIQGHTVMNQTSTALNVIHSWYDIQNQIR 109

Query:   120 ARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRER 179
             ARRL MV +GRL+ K+LEN+LKL+ KL+ LE++W GG ETMEEIL++I Q+E+A VKRER
Sbjct:   110 ARRLYMVTQGRLQHKRLENRLKLEIKLHELEVEWCGGSETMEEILAKIQQKEEATVKRER 169

Query:   180 AMAYAFSHQWRANPNP-LGK--YELGKADWGWSWKERWIAARPWEIR----VPSPSISQK 232
             AMAYAFSHQWRAN    LG+  + LGK  WGWSWKERWIAARPWEIR    V  P    K
Sbjct:   170 AMAYAFSHQWRANATQYLGQASFNLGKESWGWSWKERWIAARPWEIRAQCYVVKPIKPSK 229

Query:   233 KVQRT 237
             K +++
Sbjct:   230 KPEKS 234

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2090409 IQD5 "AT3G22190" [Arabidopsis thaliana (taxid:3702)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 73/170 (42%), Positives = 109/170 (64%)

Query:    59 EDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEI 118
             E+ AA RIQTA+R + AR+  R LKG +RLQ + + H+V+KQA  TL  +    ++QA +
Sbjct:    87 ENRAATRIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAVTLRCMQALVRVQARV 146

Query:   119 RARR--LCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVK 176
             RARR  L +  E    Q+ L+ QL  +A++  +E  W     ++E+I +++ +R++AA K
Sbjct:   147 RARRVRLALELESETSQQTLQQQLADEARVREIEEGWCDSIGSVEQIQAKLLKRQEAAAK 206

Query:   177 RERAMAYAFSHQWRANPNPLGK---YELGKADWGWSWKERWIAARPWEIR 223
             RERAMAYA +HQW+A    L     ++  K +WGW+W ERW+A RPWE R
Sbjct:   207 RERAMAYALTHQWQAGTRLLSAHSGFQPDKNNWGWNWLERWMAVRPWENR 256

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2057459 IQD6 "AT2G26180" [Arabidopsis thaliana (taxid:3702)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 79/178 (44%), Positives = 108/178 (60%)

Query:    59 EDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEI 118
             E+ AAIRIQTAFR + AR+  R LKG +RLQ + +   V+KQA  TL  +    ++QA +
Sbjct:    83 EEWAAIRIQTAFRGFLARRALRALKGIVRLQALVRGRQVRKQAAVTLRCMQALVRVQARV 142

Query:   119 RARRLCMVKEGRLRQKKL-ENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKR 177
             RARR+ M  EG+  QK L E++ K D  L  +E  W     T+++I S++ QR++ A KR
Sbjct:   143 RARRVRMTVEGQAVQKLLDEHRTKSDL-LKEVEEGWCDRKGTVDDIKSKLQQRQEGAFKR 201

Query:   178 ERAMAYAFSH-QWRANPNP----------LGKYELGKADWGWSWKERWIAARPWEIRV 224
             ERA+AYA +  QWR+  +           L   E  K  WGWSW ERW+AARPWE R+
Sbjct:   202 ERALAYALAQKQWRSTTSSNLKTNSSISYLKSQEFDKNSWGWSWLERWMAARPWETRL 259

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2143503 iqd2 "AT5G03040" [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 79/250 (31%), Positives = 132/250 (52%)

Query:    55 GMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKL 114
             G   E+ AAI IQT FR Y AR+  R ++G +RL+ + +   V++QA  TL  + T S++
Sbjct:   110 GKSNEEAAAILIQTIFRGYLARRALRAMRGLVRLKLLMEGSVVKRQAANTLKCMQTLSRV 169

Query:   115 QAEIRARRLCMVKEGRLRQKKL-ENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKA 173
             Q++IRARR+ M +E + RQK+L +   K  A L + + +W+   ++ E++ + +  + +A
Sbjct:   170 QSQIRARRIRMSEENQARQKQLLQKHAKELAGLKNGD-NWNDSIQSKEKVEANLLSKYEA 228

Query:   174 AVKRERAMAYAFSHQ--WRANP---NPLGKYELGKADWGWSWKERWIAARPWEIRVPSPS 228
              ++RERA+AY++SHQ  W+ N    NP+   +     WGWSW ERW+A RP E      S
Sbjct:   229 TMRRERALAYSYSHQQNWKNNSKSGNPMFM-DPSNPTWGWSWLERWMAGRPLESSEKEQS 287

Query:   229 ISQKKVQRTQAGKSGKDXXXXXXXXXXXXXXXX-XXGKGTSKARRLSFPDAEKPSS-SEG 286
              S      +  G   ++                    +GT + +  SF     PS  ++ 
Sbjct:   288 NSNNDNAASVKGSINRNEAAKSLTRNGSTQPNTPSSARGTPRNKN-SFFSPPTPSRLNQS 346

Query:   287 NTKAKEESSK 296
             + K+ ++ SK
Sbjct:   347 SRKSNDDDSK 356

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2100504 IQD3 "AT3G52290" [Arabidopsis thaliana (taxid:3702)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 66/183 (36%), Positives = 111/183 (60%)

Query:    55 GMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKL 114
             G  +E++AAI+IQTAFR Y AR+  R L+G +RL+ + Q   V++QAT+TL  + T +++
Sbjct:   103 GKSMEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLVQGKCVRRQATSTLQSMQTLARV 162

Query:   115 QAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAA 174
             Q +IR RRL + ++ +   ++L+ +   D   +    +W+    + E++ + +  ++ A 
Sbjct:   163 QYQIRERRLRLSEDKQALTRQLQQKHNKD--FDKTGENWNDSTLSREKVEANMLNKQVAT 220

Query:   175 VKRERAMAYAFSHQ--WRANPNPLGKYEL---GKADWGWSWKERWIAARPWEIRVPSPSI 229
             ++RE+A+AYAFSHQ  W+ N   +G           WGWSW ERW+AARP E    +P  
Sbjct:   221 MRREKALAYAFSHQNTWK-NSTKMGSQTFMDPNNPHWGWSWLERWMAARPNENHSLTPDN 279

Query:   230 SQK 232
             ++K
Sbjct:   280 AEK 282

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2066226 Iqd4 "AT2G26410" [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 5.5e-27, P = 5.5e-27
 Identities = 74/194 (38%), Positives = 113/194 (58%)

Query:    59 EDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEI 118
             E+ AAI+IQ A+R Y AR+T R L+G  RL+ + Q   V++Q    LS + T ++LQ +I
Sbjct:   147 EETAAIKIQNAYRCYTARRTLRALRGMARLKSLLQGKYVKRQMNAMLSSMQTLTRLQTQI 206

Query:   119 RARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGG----PETMEEILSRINQREKAA 174
             + RR  +  E + R + +  Q K   K N   +  +G      ++ E+I++R   R++A+
Sbjct:   207 QERRNRLSAENKTRHRLI--QQKGHQKENHQNLVTAGNFDSSNKSKEQIVARSVNRKEAS 264

Query:   175 VKRERAMAYAFSHQ--WRANPNPLGKYEL---GKADWGWSWKERWIAARPWEIRVPSPSI 229
             V+RERA+AYA+SHQ  WR N + L    L      DWGWSW ERW+A+RPW+       +
Sbjct:   265 VRRERALAYAYSHQQTWR-NSSKLPHQTLMDTNTTDWGWSWLERWMASRPWDAESIDDQV 323

Query:   230 SQKK-VQRTQAGKS 242
             S K  ++R  + KS
Sbjct:   324 SVKSSLKRENSIKS 337

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2030225 iqd8 "AT1G72670" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 67/194 (34%), Positives = 106/194 (54%)

Query:    62 AAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRAR 121
             AA RIQ AFRA+ AR+  R LK  +R+Q + +   V+KQA  TL  +    ++QA +RA 
Sbjct:    95 AATRIQAAFRAFLARQALRALKAVVRIQAIFRGRQVRKQADVTLRCMQALVRVQARVRAH 154

Query:   122 RLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRERAM 181
                   +G+  +K  + Q    AK    E  W   P ++ E+ +++  R++ A+KRERAM
Sbjct:   155 CNRGPSDGQELEKPSDQQKDDPAK--QAEKGWCDSPGSINEVRTKLQMRQEGAIKRERAM 212

Query:   182 AYAFSHQWRANPNPLGKYELG---------KADWGWSWKERWIAARPWEIRV-PSPSISQ 231
              YA +HQ R  P+P    + G         K+  GW+W +RW+A RPWE R+   P+ S 
Sbjct:   213 VYALTHQPRTCPSPAKASKQGSVKKNNGSCKSSPGWNWLDRWVADRPWEGRLMEGPTNSS 272

Query:   232 KKVQRTQAGKSGKD 245
             +  +++++  S  D
Sbjct:   273 ENARKSESSVSEHD 286

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

TAIR|locus:2097478 IQD13 "AT3G59690" [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 8.3e-24, P = 8.3e-24
 Identities = 63/183 (34%), Positives = 105/183 (57%)

Query:    58 VEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAE 117
             V++  AI+IQ AFR Y AR++FR LKG +RLQGV + HSV++Q    + Y+    ++Q +
Sbjct:   167 VKNAYAIKIQAAFRGYMARRSFRALKGLVRLQGVVRGHSVKRQTMNAMKYMQLLVRVQTQ 226

Query:   118 IRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKR 177
             +++RR+ M+ E R R  K + +L + ++++    DW     T EE   R++++  A +KR
Sbjct:   227 VQSRRIQML-ENRARNDKDDTKL-VSSRMSD---DWDDSVLTKEEKDVRLHRKIDAMIKR 281

Query:   178 ERAMAYAFSHQ-WRANPNPLGKYELGKADWGWSWKERWIAA-RPWEIRVPSPSISQKKVQ 235
             ER+MAYA+SHQ W+ +P              W+W +R     +P+ +    PS+S +   
Sbjct:   282 ERSMAYAYSHQLWKNSPKSAQDIRTSGFPLWWNWVDRQKNQNQPFRLTPTRPSLSPQPQS 341

Query:   236 RTQ 238
               Q
Sbjct:   342 SNQ 344

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2018837 IQD7 "AT1G17480" [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 53/153 (34%), Positives = 87/153 (56%)

Query:    62 AAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRAR 121
             A+ RIQ AFRA+ AR+ FR LK  +R+Q + +   V+KQA  TL  +    ++Q+ +RA 
Sbjct:    96 ASTRIQAAFRAFLARQAFRALKAVVRIQAIFRGRQVRKQAAVTLRCMQALVRVQSRVRAH 155

Query:   122 RLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRERAM 181
             R           +   + L+L   +   E  W G P +++E+ +++  +++ A+KRERAM
Sbjct:   156 R-----------RAPSDSLELKDPVKQTEKGWCGSPRSIKEVKTKLQMKQEGAIKRERAM 204

Query:   182 AYAFSHQWRANPNPLGK----YELGKADWGWSW 210
              YA +HQ R  P+P G+    + L K+  GW+W
Sbjct:   205 VYALTHQSRTCPSPSGRAITHHGLRKSSPGWNW 237

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_XI0828 hypothetical protein (312 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	302
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	98.07
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.62
smart00015	26	IQ Short calmodulin-binding motif containing conse	97.59
KOG0520	975	consensus Uncharacterized conserved protein, conta	96.9
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	96.61
PTZ00014	821	myosin-A; Provisional	96.34
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	94.26
COG5022	1463	Myosin heavy chain [Cytoskeleton]	94.12
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	93.65
KOG2128	1401	consensus Ras GTPase-activating protein family - I	93.02
smart00015	26	IQ Short calmodulin-binding motif containing conse	90.92
KOG0520	975	consensus Uncharacterized conserved protein, conta	89.78
PTZ00014	821	myosin-A; Provisional	87.35
KOG4427	1096	consensus E3 ubiquitin protein ligase [Posttransla	83.07

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=98.07  E-value=4.3e-06  Score=50.19  Aligned_cols=21  Identities=48%  Similarity=0.680  Sum_probs=19.0

Q ss_pred             HHHHHHHHHHhhhHHHHHHHh
Q 022092           60 DVAAIRIQTAFRAYKARKTFR   80 (302)
Q Consensus        60 e~AAV~IQsafRGylARr~lr   80 (302)
                      ..|||.||+.||||++|+.|+
T Consensus         1 ~~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    1 RKAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhcC
Confidence            369999999999999999885

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.62  E-value=0.00014  Score=78.32  Aligned_cols=65  Identities=28%  Similarity=0.245  Sum_probs=48.8

Q ss_pred             chhHHHHHHHHHHhhhHHHHHHHhhhh-hhhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 022092           57 PVEDVAAIRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCM  125 (302)
Q Consensus        57 ~ree~AAV~IQsafRGylARr~lr~LK-giVrLQAlvRG~~VRrQa~~tlr~~~A~vrIQa~iRarr~R~  125 (302)
                      .....+++.||..||||+.|+.|..++ +++.+|+++||.++|+.   .+ ...+++.||..+|+...|+
T Consensus       670 ~vl~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~---~~-~~~aai~~q~~~r~~~~r~  735 (862)
T KOG0160|consen  670 DVLSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRE---TE-REAAAIGIQKECRSYLNRR  735 (862)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHh---hH-HHHHHHHhHHHHHHHHHHH
Confidence            345668888999999999999999775 77889999999999981   12 3445555666655555544

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=97.59  E-value=6.6e-05  Score=47.05  Aligned_cols=22  Identities=50%  Similarity=0.662  Sum_probs=20.0

Q ss_pred             hHHHHHHHHHHhhhHHHHHHHh
Q 022092           59 EDVAAIRIQTAFRAYKARKTFR   80 (302)
Q Consensus        59 ee~AAV~IQsafRGylARr~lr   80 (302)
                      .+.||+.||+.||||++|+.|+
T Consensus         2 ~~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        2 LTRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh
Confidence            5789999999999999999984

Calmodulin-binding motif.

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=96.90  E-value=0.0021  Score=70.01  Aligned_cols=72  Identities=25%  Similarity=0.342  Sum_probs=59.7

Q ss_pred             hhHHHHHHHHHHhhhHHHHHHHhhhh-hhhhhhhhhhhhHHHHHHHhhhh-------HHHHHHHHHHHHHHHHhhhhhhh
Q 022092           58 VEDVAAIRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQATTTLS-------YLHTWSKLQAEIRARRLCMVKEG  129 (302)
Q Consensus        58 ree~AAV~IQsafRGylARr~lr~LK-giVrLQAlvRG~~VRrQa~~tlr-------~~~A~vrIQa~iRarr~R~s~eg  129 (302)
                      .-..||..||.-||||+.|+.|..++ -+|++|+.+||+.||++|.....       ..-+|-++|+-+|++..+...|.
T Consensus       808 ~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~  887 (975)
T KOG0520|consen  808 SDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEE  887 (975)
T ss_pred             cchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhc
Confidence            34569999999999999999999776 79999999999999999973222       24578889999999988876654

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=96.61  E-value=0.0057  Score=66.28  Aligned_cols=66  Identities=20%  Similarity=0.092  Sum_probs=56.5

Q ss_pred             chhHHHHHHHHHHhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 022092           57 PVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCM  125 (302)
Q Consensus        57 ~ree~AAV~IQsafRGylARr~lr~LKgiVrLQAlvRG~~VRrQa~~tlr~~~A~vrIQa~iRarr~R~  125 (302)
                      +....+++.||+.+||+++|+....-...+.+|..+|++..|+++...   ..+++.+|+.+|+..+|.
T Consensus       693 ~~~r~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y~~~---~~~~~~~qs~~r~~~~r~  758 (862)
T KOG0160|consen  693 LQLRSAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRYRAL---IPASITIQSGVRAMLARN  758 (862)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhcc
Confidence            466789999999999999998333335778999999999999999554   789999999999999987

>PTZ00014 myosin-A; Provisional

Probab=96.34  E-value=0.0044  Score=66.92  Aligned_cols=41  Identities=20%  Similarity=0.260  Sum_probs=35.7

Q ss_pred             HHHHHHHHHhhhHHHHHHHhhh-hhhhhhhhhhhhhHHHHHH
Q 022092           61 VAAIRIQTAFRAYKARKTFRRL-KGTIRLQGVSQRHSVQKQA  101 (302)
Q Consensus        61 ~AAV~IQsafRGylARr~lr~L-KgiVrLQAlvRG~~VRrQa  101 (302)
                      ..|+.||+++|||++|+.|..+ .+++++|+.+||+++++..
T Consensus       778 ~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~~  819 (821)
T PTZ00014        778 PLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAEI  819 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            3688999999999999999965 5889999999999998753

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=94.26  E-value=0.044  Score=32.66  Aligned_cols=19  Identities=21%  Similarity=0.137  Sum_probs=15.8

Q ss_pred             hhhhhhhhhhhhhHHHHHH
Q 022092           83 KGTIRLQGVSQRHSVQKQA  101 (302)
Q Consensus        83 KgiVrLQAlvRG~~VRrQa  101 (302)
                      +++|.||+.+||+++|+++
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~   20 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRY   20 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            4678889999999999876

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=94.12  E-value=0.088  Score=59.74  Aligned_cols=44  Identities=25%  Similarity=0.299  Sum_probs=32.2

Q ss_pred             hhHHHHHHHHHHhhhHHHHHHHh-hhhhhhhhhhhhhhhHHHHHH
Q 022092           58 VEDVAAIRIQTAFRAYKARKTFR-RLKGTIRLQGVSQRHSVQKQA  101 (302)
Q Consensus        58 ree~AAV~IQsafRGylARr~lr-~LKgiVrLQAlvRG~~VRrQa  101 (302)
                      .-...|++||++|||++.|++|. +++.+..+|.+.+|..+|+.+
T Consensus       743 ~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~  787 (1463)
T COG5022         743 KLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLV  787 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhc
Confidence            34578999999999999999988 566665556666655555444

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=93.65  E-value=0.16  Score=54.62  Aligned_cols=54  Identities=22%  Similarity=0.354  Sum_probs=38.5

Q ss_pred             HHHHHHHHHHhhhHHHHHHHhhhhhhh-hhhhhhhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhh
Q 022092           60 DVAAIRIQTAFRAYKARKTFRRLKGTI-RLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLC  124 (302)
Q Consensus        60 e~AAV~IQsafRGylARr~lr~LKgiV-rLQAlvRG~~VRrQa~~tlr~~~A~vrIQa~iRarr~R  124 (302)
                      -.-|+.||.+|||+++|..|+.++.+. -++ ..|.+-++          ..+-.||.++|+.+.+
T Consensus       696 ~~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~K~k----------s~v~el~~~~rg~k~~  750 (1001)
T KOG0164|consen  696 PSLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRYKLK----------SYVQELQRRFRGAKQM  750 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH----------HHHHHHHHHHHhhhhc
Confidence            357899999999999999999988544 334 55544433          2344578888886654

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=93.02  E-value=0.21  Score=56.62  Aligned_cols=67  Identities=18%  Similarity=0.217  Sum_probs=54.0

Q ss_pred             hHHHHHHHHHHhhhHHH---HHHHh--hhhhhhhhhhhhhhhHHHHHHHhhhh----HHHHHHHHHHHHHHHHhhh
Q 022092           59 EDVAAIRIQTAFRAYKA---RKTFR--RLKGTIRLQGVSQRHSVQKQATTTLS----YLHTWSKLQAEIRARRLCM  125 (302)
Q Consensus        59 ee~AAV~IQsafRGylA---Rr~lr--~LKgiVrLQAlvRG~~VRrQa~~tlr----~~~A~vrIQa~iRarr~R~  125 (302)
                      .....+.||+++|||+.   +..+.  ..+.+|.+|++.||+++|+.+...+.    |+.+.+.||+.+|++..|.
T Consensus       564 ~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~~r~  639 (1401)
T KOG2128|consen  564 QTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFPNRK  639 (1401)
T ss_pred             cCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcccch
Confidence            56678999999999994   22222  45679999999999999999874443    6889999999999988764

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=90.92  E-value=0.2  Score=31.11  Aligned_cols=19  Identities=16%  Similarity=0.151  Sum_probs=16.6

Q ss_pred             hhhhhhhhhhhhhHHHHHH
Q 022092           83 KGTIRLQGVSQRHSVQKQA  101 (302)
Q Consensus        83 KgiVrLQAlvRG~~VRrQa  101 (302)
                      +.++.||+.+||+++|+.+
T Consensus         4 ~aa~~IQa~~Rg~~~r~~y   22 (26)
T smart00015        4 RAAIIIQAAWRGYLARKRY   22 (26)
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            4688899999999999887

Calmodulin-binding motif.

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=89.78  E-value=0.3  Score=53.83  Aligned_cols=64  Identities=20%  Similarity=0.278  Sum_probs=46.7

Q ss_pred             HHHHHHHHHhhhHHHHHHHhhh-h--hhh--------hhhhhhhhhHHHHHHH----------------------hhhhH
Q 022092           61 VAAIRIQTAFRAYKARKTFRRL-K--GTI--------RLQGVSQRHSVQKQAT----------------------TTLSY  107 (302)
Q Consensus        61 ~AAV~IQsafRGylARr~lr~L-K--giV--------rLQAlvRG~~VRrQa~----------------------~tlr~  107 (302)
                      .=+|+||+++|||-.|+.|+.+ .  ++.        ++|+-.||+..|+-+.                      ...+.
T Consensus       834 ~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r~  913 (975)
T KOG0520|consen  834 QPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEEQETAATVIEDCYDFYKQLRKQTEERL  913 (975)
T ss_pred             CccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhccccccchHHHHHHHHHHHHHHHHHHH
Confidence            4589999999999999999944 2  221        3688888887775443                      11223


Q ss_pred             HHHHHHHHHHHHHHHhh
Q 022092          108 LHTWSKLQAEIRARRLC  124 (302)
Q Consensus       108 ~~A~vrIQa~iRarr~R  124 (302)
                      -+|+++||+.+|....+
T Consensus       914 ~~A~~~VQsm~rs~~a~  930 (975)
T KOG0520|consen  914 TRAVVRVQSMFRSPKAQ  930 (975)
T ss_pred             HHHHHHHHHHhcCHHHH
Confidence            56899999999987766

>PTZ00014 myosin-A; Provisional

Probab=87.35  E-value=1.3  Score=48.38  Aligned_cols=39  Identities=10%  Similarity=0.165  Sum_probs=33.0

Q ss_pred             hhhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 022092           84 GTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCM  125 (302)
Q Consensus        84 giVrLQAlvRG~~VRrQa~~tlr~~~A~vrIQa~iRarr~R~  125 (302)
                      -++.||+.+||+++|+.+..   ..++++.||+.+|++..++
T Consensus       779 ~~~~iq~~~r~~~~r~~~~~---~~~~~~~iQ~~~R~~l~~~  817 (821)
T PTZ00014        779 LVSVLEALILKIKKKRKVRK---NIKSLVRIQAHLRRHLVIA  817 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHh
Confidence            35578999999999999944   4789999999999988764

>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]

Probab=83.07  E-value=1.1  Score=48.90  Aligned_cols=24  Identities=33%  Similarity=0.447  Sum_probs=21.9

Q ss_pred             chhHHHHHHHHHHhhhHHHHHHHh
Q 022092           57 PVEDVAAIRIQTAFRAYKARKTFR   80 (302)
Q Consensus        57 ~ree~AAV~IQsafRGylARr~lr   80 (302)
                      .+.+.||+.||..+|||++|+.|+
T Consensus        27 rrr~~aa~~iq~~lrsyl~Rkk~~   50 (1096)
T KOG4427|consen   27 RRREAAALFIQRVLRSYLVRKKAQ   50 (1096)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            467889999999999999999987

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	302
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-04
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	2e-04
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	4e-04
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	6e-04
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	8e-04

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 16/136 (11%)

Query: 62  AAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIR-- 119
           AAI IQ   R Y  RK ++ ++          R  + +     +   H    +Q  +R  
Sbjct: 818 AAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGW 877

Query: 120 ------------ARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPET-MEEILSR 166
                          L       + +++L+  LK++A+          G E  + ++  +
Sbjct: 878 LARVHYHRTLKAIVYLQCCYRRMMAKRELKK-LKIEARSVERYKKLHIGLENKIMQLQRK 936

Query: 167 INQREKAAVKRERAMA 182
           I+++ K        M 
Sbjct: 937 IDEQNKEYKSLLEKMN 952

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 19/133 (14%), Positives = 40/133 (30%), Gaps = 8/133 (6%)

Query: 62  AAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRH-SVQKQATTTLSY--LHTWSKLQAEI 118
              +     RA +  +     + ++  +       SVQ        Y       K Q   
Sbjct: 765 EQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVS 824

Query: 119 RARRLCMVKEGRLRQKKLENQL-KLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKR 177
               +    + +LR  K E  +       N ++  W      +E+      +  +  +KR
Sbjct: 825 ELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTW----SALEKAEQEHAEALRIELKR 880

Query: 178 ERAMAYAFSHQWR 190
           ++ +A       R
Sbjct: 881 QKKIAVLLQKYNR 893

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 15/124 (12%), Positives = 37/124 (29%), Gaps = 10/124 (8%)

Query: 61  VAAIRIQTAFRAYKARKTFRRL---KGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAE 117
            +   +Q+   A+K  K   +    +    L+ +      + +      ++        E
Sbjct: 796 DSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNE 855

Query: 118 IRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKR 177
           I +    + K  +   + L  +LK   K+  L        +    IL ++          
Sbjct: 856 IDSTWSALEKAEQEHAEALRIELKRQKKIAVLL-------QKYNRILKKLENWATTKSVY 908

Query: 178 ERAM 181
             + 
Sbjct: 909 LGSN 912

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 14/123 (11%), Positives = 37/123 (30%), Gaps = 10/123 (8%)

Query: 62  AAIRIQTAFRAYKA---RKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEI 118
           +   +Q+   A+K     +   + +    L+ +      + +      ++        EI
Sbjct: 789 SIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEI 848

Query: 119 RARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRE 178
            +    + K  +   + L  +LK   K+  L        +    IL ++           
Sbjct: 849 DSTWSALEKAEQEHAEALRIELKRQKKIAVLL-------QKYNRILKKLENWATTKSVYL 901

Query: 179 RAM 181
            + 
Sbjct: 902 GSN 904

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 62  AAIRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQA 101
           A IRIQ   R +  RK +  ++   I +Q   + +  +  A
Sbjct: 7   ACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYA 47

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	302
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	99.09
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	98.83
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.71
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.67
2l53_B	31	CAM, voltage-gated sodium channel type V alpha iso	98.01
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	97.93
2kxw_B	27	Sodium channel protein type 2 subunit alpha; actio	97.91
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	97.36
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	97.29
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	97.17
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	96.93
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	96.92
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	96.88
3gn4_A	148	Myosin-VI; unconventional myosin, motility, lever	96.56
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	95.81
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	94.16
4dck_A	168	Sodium channel protein type 5 subunit alpha; IQ-mo	93.11
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	91.78
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	91.12
4anj_A	1052	Unconventional myosin-VI, green fluorescent prote;	87.47

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=99.09  E-value=1.7e-10  Score=83.28  Aligned_cols=53  Identities=23%  Similarity=0.219  Sum_probs=45.2

Q ss_pred             hhHHHHHHHHHHhhhHHHHHHHhhhh-hhhhhhhhhhhhHHHHHHHhhhhHHHHH
Q 022092           58 VEDVAAIRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQATTTLSYLHTW  111 (302)
Q Consensus        58 ree~AAV~IQsafRGylARr~lr~LK-giVrLQAlvRG~~VRrQa~~tlr~~~A~  111 (302)
                      ..+.|||.||+.||||++|+.|..++ +++.||+.+||+++|+.+.. ++..+++
T Consensus         3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~-~r~~~aA   56 (58)
T 2ix7_C            3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKF-LRRTKAA   56 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCc
Confidence            46789999999999999999999886 89999999999999999854 4444443

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=98.83  E-value=4.8e-09  Score=72.80  Aligned_cols=42  Identities=17%  Similarity=0.205  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHhhhHHHHHHHhhhh---hhhhhhhhhhhhHHHHHH
Q 022092           60 DVAAIRIQTAFRAYKARKTFRRLK---GTIRLQGVSQRHSVQKQA  101 (302)
Q Consensus        60 e~AAV~IQsafRGylARr~lr~LK---giVrLQAlvRG~~VRrQa  101 (302)
                      ..|||.||+.||||++|+.|..++   +++.+|+.+||+++|+.+
T Consensus         3 r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y   47 (48)
T 1n2d_C            3 SQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV   47 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence            358999999999999999999664   788999999999999875

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.71  E-value=2.6e-08  Score=107.24  Aligned_cols=67  Identities=25%  Similarity=0.249  Sum_probs=59.9

Q ss_pred             HHHHHHHHHHhhhHHHHHHHhhhh-hhhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhh
Q 022092           60 DVAAIRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCMVK  127 (302)
Q Consensus        60 e~AAV~IQsafRGylARr~lr~LK-giVrLQAlvRG~~VRrQa~~tlr~~~A~vrIQa~iRarr~R~s~  127 (302)
                      ..||+.||++||||++|+.|+.++ +++.||+.+||+++|+.+. .++...|++.||+.+|++.+|+.-
T Consensus       768 ~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~-~lr~~~AAi~IQs~~Rg~~~Rk~y  835 (1080)
T 2dfs_A          768 RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYAT-FLRRTRAAIIIQKFQRMYVVRKRY  835 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhccc-ccccchhHHHHHHHHhhHHHHHHH
Confidence            579999999999999999999775 8899999999999999984 467788999999999999988743

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.67  E-value=2.4e-08  Score=107.50  Aligned_cols=67  Identities=25%  Similarity=0.248  Sum_probs=40.3

Q ss_pred             hhHHHHHHHHHHhhhHHHHHHHhhhh-hhhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 022092           58 VEDVAAIRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCM  125 (302)
Q Consensus        58 ree~AAV~IQsafRGylARr~lr~LK-giVrLQAlvRG~~VRrQa~~tlr~~~A~vrIQa~iRarr~R~  125 (302)
                      ++..||+.||++||||++|+.|..++ +++.||+.+||+++|+.+.. ++...+++.||+.+|+..+|+
T Consensus       814 r~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~~~-lr~~~aav~IQ~~~Rg~l~R~  881 (1080)
T 2dfs_A          814 RRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQM-MLREHKSIIIQKHVRGWLARV  881 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTTTHHHH
T ss_pred             ccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence            44566777777777777777776554 56667777777777766643 233345555555555554443

>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}

Probab=98.01  E-value=3.1e-06  Score=55.27  Aligned_cols=24  Identities=33%  Similarity=0.501  Sum_probs=21.7

Q ss_pred             chhHHHHHHHHHHhhhHHHHHHHh
Q 022092           57 PVEDVAAIRIQTAFRAYKARKTFR   80 (302)
Q Consensus        57 ~ree~AAV~IQsafRGylARr~lr   80 (302)
                      .+||.||+.||.|||+||.|+.+.
T Consensus         3 k~Ee~aA~vIQrA~R~yl~rr~~~   26 (31)
T 2l53_B            3 GSEEVSAMVIQRAFRRHLLQRSLK   26 (31)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc
Confidence            579999999999999999998765

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=97.93  E-value=1.8e-05  Score=54.60  Aligned_cols=42  Identities=14%  Similarity=0.108  Sum_probs=36.4

Q ss_pred             hhhhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 022092           83 KGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCM  125 (302)
Q Consensus        83 KgiVrLQAlvRG~~VRrQa~~tlr~~~A~vrIQa~iRarr~R~  125 (302)
                      ++++.||+.+||+++|+.+.. ++...+++.||+.+||..+|.
T Consensus         4 ~a~i~iQ~~~Rg~l~R~~~~~-~~~~~aai~IQ~~~Rg~~~Rk   45 (48)
T 1n2d_C            4 QAIKYLQNNIKGFIIRQRVND-EMKVNCATLLQAAYRGHSIRA   45 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhHHHHH
Confidence            478999999999999999954 555679999999999998875

>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}

Probab=97.91  E-value=3.8e-06  Score=53.27  Aligned_cols=22  Identities=41%  Similarity=0.607  Sum_probs=20.0

Q ss_pred             chhHHHHHHHHHHhhhHHHHHH
Q 022092           57 PVEDVAAIRIQTAFRAYKARKT   78 (302)
Q Consensus        57 ~ree~AAV~IQsafRGylARr~   78 (302)
                      .+||.||+.||.|||+||+|+.
T Consensus         3 k~Ee~aA~vIQrA~R~yl~~~~   24 (27)
T 2kxw_B            3 KQEEVSAIVIQRAYRRYLLKQK   24 (27)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhh
Confidence            5789999999999999999865

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=97.36  E-value=0.00031  Score=50.19  Aligned_cols=41  Identities=15%  Similarity=0.084  Sum_probs=35.7

Q ss_pred             hhhhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhh
Q 022092           83 KGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCMV  126 (302)
Q Consensus        83 KgiVrLQAlvRG~~VRrQa~~tlr~~~A~vrIQa~iRarr~R~s  126 (302)
                      ..++.||+.+||+++|+.+...   ..+++.||+.+||..+|+.
T Consensus         6 ~aai~IQ~~~Rg~~~Rk~~~~~---r~aai~IQ~~~Rg~~aR~~   46 (58)
T 2ix7_C            6 AACIRIQKTIRGWLLRKRYLCM---QRAAITVQRYVRGYQARCY   46 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence            4789999999999999999443   5799999999999998864

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=97.29  E-value=0.00041  Score=50.70  Aligned_cols=41  Identities=22%  Similarity=0.347  Sum_probs=25.7

Q ss_pred             HHHHHHHHHHhhhHHHHHHHhhh---h-hhhhhhhhhhhhHHHHH
Q 022092           60 DVAAIRIQTAFRAYKARKTFRRL---K-GTIRLQGVSQRHSVQKQ  100 (302)
Q Consensus        60 e~AAV~IQsafRGylARr~lr~L---K-giVrLQAlvRG~~VRrQ  100 (302)
                      ...++.||++.|||++|+.|..+   + ++..+|.-+|+++.++.
T Consensus         6 ~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~   50 (64)
T 1wdc_A            6 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN   50 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            34567777777777777777644   2 44456666666666553

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=97.17  E-value=0.00041  Score=50.62  Aligned_cols=39  Identities=23%  Similarity=0.175  Sum_probs=20.0

Q ss_pred             HHHHHHHHHhhhHHHHHHHhhh---h-hhhhhhhhhhhhHHHH
Q 022092           61 VAAIRIQTAFRAYKARKTFRRL---K-GTIRLQGVSQRHSVQK   99 (302)
Q Consensus        61 ~AAV~IQsafRGylARr~lr~L---K-giVrLQAlvRG~~VRr   99 (302)
                      ..++.||++.|||++|+.|..+   + ++..+|.-+|+++.++
T Consensus         5 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr   47 (63)
T 2bl0_A            5 EIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK   47 (63)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            3455566666666666665533   1 3334455555554443

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=96.93  E-value=0.0014  Score=47.81  Aligned_cols=42  Identities=14%  Similarity=-0.045  Sum_probs=37.6

Q ss_pred             hhhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 022092           84 GTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCM  125 (302)
Q Consensus        84 giVrLQAlvRG~~VRrQa~~tlr~~~A~vrIQa~iRarr~R~  125 (302)
                      -++.||+.+||+++|+.+...+....|+..||.-+|+...++
T Consensus         6 i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr   47 (63)
T 2bl0_A            6 IVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK   47 (63)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            467899999999999999988888889999999999988765

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=96.92  E-value=0.0016  Score=47.56  Aligned_cols=42  Identities=14%  Similarity=-0.047  Sum_probs=37.6

Q ss_pred             hhhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 022092           84 GTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCM  125 (302)
Q Consensus        84 giVrLQAlvRG~~VRrQa~~tlr~~~A~vrIQa~iRarr~R~  125 (302)
                      -++.|||.+||+++|+.+...+....|+..||.-+|+....+
T Consensus         8 i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~   49 (64)
T 1wdc_A            8 IISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR   49 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            577899999999999999988888889999999999987765

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=96.88  E-value=0.00077  Score=71.20  Aligned_cols=42  Identities=21%  Similarity=0.272  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHhhhHHHHHHHhhh----hhhhhhhhhhhhhHHHHHH
Q 022092           60 DVAAIRIQTAFRAYKARKTFRRL----KGTIRLQGVSQRHSVQKQA  101 (302)
Q Consensus        60 e~AAV~IQsafRGylARr~lr~L----KgiVrLQAlvRG~~VRrQa  101 (302)
                      ..+|+.||+++|||++|+.|..+    .+++.+|..+||+++||..
T Consensus       779 ~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~  824 (837)
T 1kk8_A          779 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  824 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence            35789999999999999999866    3678888888888888765

>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}

Probab=96.56  E-value=0.0019  Score=55.57  Aligned_cols=34  Identities=18%  Similarity=0.488  Sum_probs=28.4

Q ss_pred             hHHHHHHHHHHhhhHHHHHHHh-hhhhhhhhhhhh
Q 022092           59 EDVAAIRIQTAFRAYKARKTFR-RLKGTIRLQGVS   92 (302)
Q Consensus        59 ee~AAV~IQsafRGylARr~lr-~LKgiVrLQAlv   92 (302)
                      ...|+|.||+++||||+|+.++ .+.|++++.+|.
T Consensus        44 R~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~   78 (148)
T 3gn4_A           44 RAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLK   78 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            4578999999999999999999 678888776654

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=95.81  E-value=0.0065  Score=65.79  Aligned_cols=40  Identities=23%  Similarity=0.223  Sum_probs=36.1

Q ss_pred             HHHHHHHHHhhhHHHHHHHhhh----hhhhhhhhhhhhhHHHHH
Q 022092           61 VAAIRIQTAFRAYKARKTFRRL----KGTIRLQGVSQRHSVQKQ  100 (302)
Q Consensus        61 ~AAV~IQsafRGylARr~lr~L----KgiVrLQAlvRG~~VRrQ  100 (302)
                      .+|+.||+++|||++|+.|..+    .+++.+|..+||++.|+.
T Consensus       793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~  836 (1184)
T 1i84_S          793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH  836 (1184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            5899999999999999999966    378899999999999975

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=94.16  E-value=0.082  Score=55.90  Aligned_cols=42  Identities=14%  Similarity=-0.047  Sum_probs=36.9

Q ss_pred             hhhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 022092           84 GTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCM  125 (302)
Q Consensus        84 giVrLQAlvRG~~VRrQa~~tlr~~~A~vrIQa~iRarr~R~  125 (302)
                      .++.||+.+||+++|+.+...+....|++.||..+|++..++
T Consensus       781 ~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r  822 (837)
T 1kk8_A          781 IISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR  822 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            567899999999999999776666789999999999988775

>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A

Probab=93.11  E-value=0.059  Score=47.06  Aligned_cols=26  Identities=31%  Similarity=0.448  Sum_probs=22.7

Q ss_pred             cchhHHHHHHHHHHhhhHHHHHHHhh
Q 022092           56 MPVEDVAAIRIQTAFRAYKARKTFRR   81 (302)
Q Consensus        56 ~~ree~AAV~IQsafRGylARr~lr~   81 (302)
                      ..+++.||+.||.|||.|+.|+.+..
T Consensus       126 ~~~e~~aA~~IQra~R~~~~r~~~~~  151 (168)
T 4dck_A          126 RKHEEVSAMVIQRAFRRHLLQRSLKH  151 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccc
Confidence            36789999999999999999987764

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=91.78  E-value=0.27  Score=53.25  Aligned_cols=43  Identities=14%  Similarity=-0.008  Sum_probs=37.3

Q ss_pred             hhhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhh
Q 022092           84 GTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCMV  126 (302)
Q Consensus        84 giVrLQAlvRG~~VRrQa~~tlr~~~A~vrIQa~iRarr~R~s  126 (302)
                      .++.||+.+||+++|+.+...+....+++.||+.+|++..++.
T Consensus       794 ~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~  836 (1184)
T 1i84_S          794 VIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH  836 (1184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            5678999999999999998766667899999999999987653

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A

Probab=91.12  E-value=0.12  Score=54.40  Aligned_cols=25  Identities=36%  Similarity=0.626  Sum_probs=22.1

Q ss_pred             HHHHHHHHHHhhhHHHHHHHhhhhh
Q 022092           60 DVAAIRIQTAFRAYKARKTFRRLKG   84 (302)
Q Consensus        60 e~AAV~IQsafRGylARr~lr~LKg   84 (302)
                      ..+|+.||+++|||++|+.|+.++.
T Consensus       768 ~~~~~~iQ~~~Rg~l~R~~~~~~r~  792 (795)
T 1w7j_A          768 RAACIRIQKTIRGWLMRKKYMRMRR  792 (795)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4589999999999999999998764

>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}

Probab=87.47  E-value=0.61  Score=50.58  Aligned_cols=42  Identities=7%  Similarity=0.176  Sum_probs=30.8

Q ss_pred             hHHHHHHHHHHhhhHHHHHHHhhhh-hhhhhhhhhhhhHHHHHH
Q 022092           59 EDVAAIRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQA  101 (302)
Q Consensus        59 ee~AAV~IQsafRGylARr~lr~LK-giVrLQAlvRG~~VRrQa  101 (302)
                      .+.+|+.||. +|||++|+.|+.++ +++.+|.+-|+...|+..
T Consensus       774 ~~~~~~~iq~-~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~~~  816 (1052)
T 4anj_A          774 PDHLAELVKR-VNHWLICSRWKKVQWCSLSVIKLKNKIKYRAEA  816 (1052)
T ss_dssp             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            3567777775 79999999998775 677777777776655443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	302
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	97.3
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	97.11
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	95.27
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	93.56
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	92.73

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=97.30  E-value=6.7e-05  Score=75.98  Aligned_cols=42  Identities=21%  Similarity=0.301  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHhhhHHHHHHHhhhh----hhhhhhhhhhhhHHHHHH
Q 022092           60 DVAAIRIQTAFRAYKARKTFRRLK----GTIRLQGVSQRHSVQKQA  101 (302)
Q Consensus        60 e~AAV~IQsafRGylARr~lr~LK----giVrLQAlvRG~~VRrQa  101 (302)
                      ..+|+.||+.||||++|+.|+.+|    +++.+|..+||+++||.+
T Consensus       731 ~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~  776 (789)
T d1kk8a2         731 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  776 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            568999999999999999999775    567789999999998775

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=97.11  E-value=0.00017  Score=73.03  Aligned_cols=42  Identities=14%  Similarity=0.111  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHhhhHHHHHHHhhh----hhhhhhhhhhhhhHHHHHH
Q 022092           60 DVAAIRIQTAFRAYKARKTFRRL----KGTIRLQGVSQRHSVQKQA  101 (302)
Q Consensus        60 e~AAV~IQsafRGylARr~lr~L----KgiVrLQAlvRG~~VRrQa  101 (302)
                      ..+|+.||+.+|||++|+.|+.+    ++++.||+.+||+++||.+
T Consensus       735 ~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~  780 (794)
T d2mysa2         735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            46899999999999999999855    3688899999999988775

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=95.27  E-value=0.014  Score=58.68  Aligned_cols=53  Identities=8%  Similarity=-0.068  Sum_probs=41.7

Q ss_pred             HHHHHHHhhh-hhhhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 022092           73 YKARKTFRRL-KGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCM  125 (302)
Q Consensus        73 ylARr~lr~L-KgiVrLQAlvRG~~VRrQa~~tlr~~~A~vrIQa~iRarr~R~  125 (302)
                      +|....-..+ +.++.||+.+||+++|+.+...+....|++.||+.+|++..|+
T Consensus       725 ~LE~~r~~~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r  778 (794)
T d2mysa2         725 LLEEMRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVK  778 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3444333333 4677899999999999999877777789999999999998775

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=93.56  E-value=0.057  Score=54.01  Aligned_cols=43  Identities=16%  Similarity=-0.021  Sum_probs=35.6

Q ss_pred             hhhhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 022092           83 KGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCM  125 (302)
Q Consensus        83 KgiVrLQAlvRG~~VRrQa~~tlr~~~A~vrIQa~iRarr~R~  125 (302)
                      +.++.||+.+||+++|+++........+++.||+.+|++.+|+
T Consensus       732 ~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr  774 (789)
T d1kk8a2         732 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR  774 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            3567889999999999999654444558999999999998875

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=92.73  E-value=0.03  Score=55.43  Aligned_cols=25  Identities=36%  Similarity=0.602  Sum_probs=21.4

Q ss_pred             hHHHHHHHHHHhhhHHHHHHHhhhh
Q 022092           59 EDVAAIRIQTAFRAYKARKTFRRLK   83 (302)
Q Consensus        59 ee~AAV~IQsafRGylARr~lr~LK   83 (302)
                      ...+||.||+.||||++||.|..+|
T Consensus       705 l~~~~~~iQ~~~R~~l~Rk~~~r~r  729 (730)
T d1w7ja2         705 LRAACIRIQKTIRGWLMRKKYMRMR  729 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3458999999999999999998765