Citrus Sinensis ID: 022179

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-
Protein Sequence
MATPVRKSHVSTSDLLTWPEAPSSDSSHPPASAPRSHQPSDGVSKVLFGGQITDEEAQSLNKKKPCSGYKLKEINGSGIFVANGENGASESDAGNRNNRTSVRVYQQAMNGISQISFSAEETVSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPEIQPRSLAAARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQKFAELTGNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSISLV
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccEEEEcccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEEEcccccccEEEEcccccccccccccHHHHHHHHHccccccccHHHHHHHHcccccccccccccccccccccccccHHHHHHHcccccccccccccccccccEEcccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccEEEEcccccHHHHHHHHccccccccHHHHccccccEccccccccccccccccccccccEEEEccccccEEEEEcccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHccHHHccccccccccccccccccHHHHHHHccccccccccccccccccEEEEccccccccEEccccccEEcccHccccHHHHHccccccccccccccccccccHccHHHcccccccccccccccccccccccccccccEEEEc
Coil and Loop (DISEMBL)
matpvrkshvstsdlltwpeapssdsshppasaprshqpsdgvskvlfggqitdeeaqslnkkkpcsgyklkeingsgifvangengasesdagnrnnrtSVRVYQQAMNGisqisfsaeetvspkkptsvpevakqrelsgslqsesdlktkkQISDakfkeisghdifspapeiqprSLAAARSLeskeskdmgepaprnvrtsvkvsnpaggqsnilfgeepvvktsKKIHNQKfaeltgndifkgdvppgsaekplsnaklremsgsnifadekvesrdyfggvrkppggessislv
Flexible Loop (DISEMBL)
matpvrkshvstsdlltwpeaPSSDSSHPPasaprshqpsdGVSKVLFGGQITDEeaqslnkkkpcsgykLKEINGSGIFVANGEngasesdagnrnNRTSVRVYQQAMNGISQIsfsaeetvspkkptsvpevakqrelsgslqsesdlktkKQISDAKFkeisghdifspapeiqpRSLAAARSLESkeskdmgepaprnvrtsvkvsnpaggqsnilfgeepvvktSKKIHNQkfaeltgndifkgdvppgSAEKplsnaklremsgsnifadekvesrdyfggvrkppggessislv
Low Complexity Region (SEG)
MATPVRKSHVSTSDLLTWpeapssdsshppasaprshqpsDGVSKVLFGGQITDEEAQSLNKKKPCSGYKLKEINGSGIFVANGENGASESDAGNRNNRTSVRVYQQAMNGISQISFSAEETVSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPEIQPRSLAAARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQKFAELTGNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSISLV
Disordered region (IsUnstruct)
**********************************************************************LKEINGSGIFV****************************************************************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
*********VSTSDLL******************************LFGG***********************INGSGIF************************YQQAMNGISQI*************************************************SGHDIFS*************************************************************IHNQKFAELTGNDI**************************IFAD*********************ISLV
Disordered Region (DISEMBL)
************SDLLTW**********************DGVSKVLFGGQITDEEAQSLNKKKPCSGYKLKEINGSGIFVANGENGASESDAGNRNNRTSVRVYQQAMNGISQISFS*************************************ISDAKFKEISGHDIFSPAPEIQP************************VRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQKFAELTGNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKP**********
Disordered Region (DISPRO)
*****************************************GVSKVLFGGQITDEEAQSLNKKKPCSGYKLKEING*GIF*******************TSVRVYQQAMNGISQISFSAEETVSPKKPTSVPEVAK***********************KFKEISGHDIFSPAPEIQPRSLAAARS********************VK*****GGQSNILFGEEPVVKTSKKIHNQKFAELTGNDIFK************************************FGGVRKPPGGESSI*L*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATPVRKSHVSTSDLLTWPEAPSSDSSHPPASAPRSHQPSDGVSKVLFGGQITDEEAQSLNKKKPCSGYKLKEINGSGIFVANGENGASESDAGNRNNRTSVRVYQQAMNGISQISFSAEETVSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPEIQPRSLAAARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQKFAELTGNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSISLV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	301
255580868	300	conserved hypothetical protein [Ricinus	0.986	0.99	0.776	1e-129
356567722	303	PREDICTED: uncharacterized protein LOC10	0.993	0.986	0.755	1e-127
356540285	301	PREDICTED: uncharacterized protein LOC10	0.986	0.986	0.749	1e-125
225459322	304	PREDICTED: uncharacterized protein LOC10	0.980	0.970	0.745	1e-123
356540287	305	PREDICTED: uncharacterized protein LOC10	0.993	0.980	0.734	1e-122
224083697	300	predicted protein [Populus trichocarpa]	0.976	0.98	0.737	1e-121
449451437	299	PREDICTED: uncharacterized protein LOC10	0.963	0.969	0.743	1e-121
147856521	342	hypothetical protein VITISV_030871 [Viti	0.986	0.868	0.684	1e-119
225459324	295	PREDICTED: uncharacterized protein LOC10	0.950	0.969	0.715	1e-116
224096181	300	predicted protein [Populus trichocarpa]	0.976	0.98	0.754	1e-115

>gi|255580868|ref|XP_002531253.1| conserved hypothetical protein [Ricinus communis] gi|223529138|gb|EEF31117.1| conserved hypothetical protein [Ricinus communis]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 233/300 (77%), Positives = 262/300 (87%), Gaps = 3/300 (1%)

Query: 2   ATPVRKSHVSTSDLLTWPEAPSSDSSHPPASAPRSHQPSDGVSKVLFGGQITDEEAQSLN 61
           +TPVR  H STSDLLTW EAP   S    ++  RSHQPSD +SKVL GGQ++DEEAQS  
Sbjct: 4   STPVRNPHSSTSDLLTWNEAPPPQSPASASTTHRSHQPSDRISKVLSGGQLSDEEAQSFL 63

Query: 62  KKKPCSGYKLKEINGSGIFVANGENGASESDAGNRNNRTSVRVYQQAMNGISQISFSAEE 121
           KKKPCSGYKLKE+NGSGIF  NG + AS S A N+   TSVR+ QQAMNGISQISFS EE
Sbjct: 64  KKKPCSGYKLKEMNGSGIFAGNGGDDASHSSAANK---TSVRICQQAMNGISQISFSTEE 120

Query: 122 TVSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPEIQPRSL 181
           ++SPKKPTS+PEVAKQRELSG+LQSE+DLK KKQIS+AKFKEISGHDIF+P+P+I  RSL
Sbjct: 121 SISPKKPTSLPEVAKQRELSGTLQSEADLKNKKQISNAKFKEISGHDIFAPSPDISTRSL 180

Query: 182 AAARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQKFAEL 241
           AAAR+LESKE+KDM +PAPRN+RTSVKVSNPAGGQSNILFGE+PV +T+KKIHNQKF EL
Sbjct: 181 AAARTLESKENKDMEKPAPRNIRTSVKVSNPAGGQSNILFGEDPVTRTAKKIHNQKFQEL 240

Query: 242 TGNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSISLV 301
           TGNDIFKGDVPPGSAEKPLSNAKL+E+SGSNIFAD K ESRDYF GVRKPPGGESSI+LV
Sbjct: 241 TGNDIFKGDVPPGSAEKPLSNAKLKEISGSNIFADGKSESRDYFRGVRKPPGGESSIALV 300

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567722|ref|XP_003552066.1| PREDICTED: uncharacterized protein LOC100804656 [Glycine max]

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 226/299 (75%), Positives = 261/299 (87%)

Query: 3   TPVRKSHVSTSDLLTWPEAPSSDSSHPPASAPRSHQPSDGVSKVLFGGQITDEEAQSLNK 62
           TPVRK H +TSDLLTW E P  +S+   ASA RS QPSD +SKVL GGQ+TDEEAQ+L K
Sbjct: 5   TPVRKPHTNTSDLLTWSETPPPESAATVASATRSGQPSDRISKVLHGGQLTDEEAQTLAK 64

Query: 63  KKPCSGYKLKEINGSGIFVANGENGASESDAGNRNNRTSVRVYQQAMNGISQISFSAEET 122
            KPCSGYK+KE+ GSGIF ANGE+ ASE+++ N NNRTS+R+ QQAMNGISQISFS +E+
Sbjct: 65  SKPCSGYKMKEMTGSGIFSANGEDSASEANSANLNNRTSIRMCQQAMNGISQISFSTDES 124

Query: 123 VSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPEIQPRSLA 182
           +SPKKPTS+PEVAKQRELSG++QS+SD K+KKQIS+AK KE+SG+DIF P PEI PRS+A
Sbjct: 125 ISPKKPTSIPEVAKQRELSGTMQSDSDTKSKKQISNAKTKELSGNDIFGPPPEILPRSVA 184

Query: 183 AARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQKFAELT 242
           AAR+LESKESKDMGEP PRN+RTSVKVSNPAGGQSNILFGE PV KT+KKIHNQKFAELT
Sbjct: 185 AARTLESKESKDMGEPLPRNLRTSVKVSNPAGGQSNILFGEAPVEKTAKKIHNQKFAELT 244

Query: 243 GNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSISLV 301
           GN+IF+GDVPPGSAEKPLS AKLREM+GS+IFAD K E +D   G RKPPGGESSI+LV
Sbjct: 245 GNNIFQGDVPPGSAEKPLSRAKLREMTGSDIFADGKAEIKDPVRGARKPPGGESSIALV 303

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540285|ref|XP_003538620.1| PREDICTED: uncharacterized protein LOC100789861 isoform 1 [Glycine max]

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 224/299 (74%), Positives = 259/299 (86%), Gaps = 2/299 (0%)

Query: 3   TPVRKSHVSTSDLLTWPEAPSSDSSHPPASAPRSHQPSDGVSKVLFGGQITDEEAQSLNK 62
           TPVRK H +TSDLLTW E P  DS+   A+  RS QPSD +SKVL GGQ+TDEEAQ+L K
Sbjct: 5   TPVRKPHTNTSDLLTWSETPPPDSAA--AATTRSGQPSDRISKVLHGGQLTDEEAQTLAK 62

Query: 63  KKPCSGYKLKEINGSGIFVANGENGASESDAGNRNNRTSVRVYQQAMNGISQISFSAEET 122
            KPCSGYK+KE+ GSGIF ANGE+ ASE+++ N NNRTS+R+ QQAMNGISQISFS +E+
Sbjct: 63  SKPCSGYKMKEMTGSGIFAANGEDSASEANSANLNNRTSIRMCQQAMNGISQISFSTDES 122

Query: 123 VSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPEIQPRSLA 182
           +SPKKPTS+PEVAKQRELSG++QS+SD K+KKQIS+AK KE+SG+DIF P PEI PRS+A
Sbjct: 123 ISPKKPTSIPEVAKQRELSGTMQSDSDTKSKKQISNAKTKELSGNDIFGPPPEIVPRSVA 182

Query: 183 AARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQKFAELT 242
           AAR+LESKESKDMGEP PRN+RTSVKVSNPAGGQSNILFGE  V KT+KKIHNQKFAELT
Sbjct: 183 AARTLESKESKDMGEPLPRNLRTSVKVSNPAGGQSNILFGEASVEKTAKKIHNQKFAELT 242

Query: 243 GNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSISLV 301
           GN+IF+GDVPPGSAEKPLS AKLREM+GS+IFAD K E +D   G RKPPGGESSI+LV
Sbjct: 243 GNNIFQGDVPPGSAEKPLSRAKLREMTGSDIFADGKTEIKDPVRGARKPPGGESSIALV 301

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459322|ref|XP_002285797.1| PREDICTED: uncharacterized protein LOC100260886 isoform 2 [Vitis vinifera]

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/306 (74%), Positives = 259/306 (84%), Gaps = 11/306 (3%)

Query: 2   ATPVRKSHVSTSDLLTWPEAPSSDSSHPPASAPR----SHQPSDGVSKVLFGGQITDEEA 57
           ATPVRK H ST+DLLTW E P +DS   PASA R    SHQPSDG+SKV+FGGQ+TDEEA
Sbjct: 4   ATPVRKPHTSTADLLTWSETPPADS---PASASRPAVRSHQPSDGISKVVFGGQVTDEEA 60

Query: 58  QSLNKKKPCSGYKLKEINGSGIFVANGENGASESDAGNR--NNRTSVRVYQQAMNGISQI 115
           ++L+K+KPCSGYKLKEI GSGIF   GENG SES + N   NN+T+VR+YQQA   ISQI
Sbjct: 61  EALSKRKPCSGYKLKEITGSGIFALEGENGTSESGSANPTPNNKTTVRIYQQAAAAISQI 120

Query: 116 SFSAEETVSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPE 175
           SF  EE+VSPKKPT++PEVAKQRELSG+L+SE + K +KQ+SDAK KE+SGHDIF+P PE
Sbjct: 121 SFGTEESVSPKKPTTLPEVAKQRELSGTLESE-ETKMQKQLSDAKCKELSGHDIFAPPPE 179

Query: 176 IQPRSLAAARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHN 235
           I PR  +AARSL  KESKDMGEPAPRNVRTSVKVSNPAGGQSNI+F +E V+KT+KKIHN
Sbjct: 180 ILPRP-SAARSLVLKESKDMGEPAPRNVRTSVKVSNPAGGQSNIMFSDETVLKTAKKIHN 238

Query: 236 QKFAELTGNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGE 295
           QKF ELTGNDIFKGDVPP SAEK LS AKLREMSG++IFAD K ESRDY GGVRKPPGGE
Sbjct: 239 QKFVELTGNDIFKGDVPPSSAEKSLSMAKLREMSGNDIFADGKAESRDYLGGVRKPPGGE 298

Query: 296 SSISLV 301
           SSI+LV
Sbjct: 299 SSIALV 304

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540287|ref|XP_003538621.1| PREDICTED: uncharacterized protein LOC100789861 isoform 2 [Glycine max]

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 221/301 (73%), Positives = 257/301 (85%), Gaps = 2/301 (0%)

Query: 3   TPVRKSHVSTSDLLTWPEAPSSDSSHPPASAPR--SHQPSDGVSKVLFGGQITDEEAQSL 60
           TPVRK H +TSDLLTW E P  DS+    +     + QPSD +SKVL GGQ+TDEEAQ+L
Sbjct: 5   TPVRKPHTNTSDLLTWSETPPPDSAAAATTRSAAFTSQPSDRISKVLHGGQLTDEEAQTL 64

Query: 61  NKKKPCSGYKLKEINGSGIFVANGENGASESDAGNRNNRTSVRVYQQAMNGISQISFSAE 120
            K KPCSGYK+KE+ GSGIF ANGE+ ASE+++ N NNRTS+R+ QQAMNGISQISFS +
Sbjct: 65  AKSKPCSGYKMKEMTGSGIFAANGEDSASEANSANLNNRTSIRMCQQAMNGISQISFSTD 124

Query: 121 ETVSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPEIQPRS 180
           E++SPKKPTS+PEVAKQRELSG++QS+SD K+KKQIS+AK KE+SG+DIF P PEI PRS
Sbjct: 125 ESISPKKPTSIPEVAKQRELSGTMQSDSDTKSKKQISNAKTKELSGNDIFGPPPEIVPRS 184

Query: 181 LAAARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQKFAE 240
           +AAAR+LESKESKDMGEP PRN+RTSVKVSNPAGGQSNILFGE  V KT+KKIHNQKFAE
Sbjct: 185 VAAARTLESKESKDMGEPLPRNLRTSVKVSNPAGGQSNILFGEASVEKTAKKIHNQKFAE 244

Query: 241 LTGNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSISL 300
           LTGN+IF+GDVPPGSAEKPLS AKLREM+GS+IFAD K E +D   G RKPPGGESSI+L
Sbjct: 245 LTGNNIFQGDVPPGSAEKPLSRAKLREMTGSDIFADGKTEIKDPVRGARKPPGGESSIAL 304

Query: 301 V 301
           V
Sbjct: 305 V 305

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083697|ref|XP_002307088.1| predicted protein [Populus trichocarpa] gi|222856537|gb|EEE94084.1| predicted protein [Populus trichocarpa]

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 219/297 (73%), Positives = 258/297 (86%), Gaps = 3/297 (1%)

Query: 5   VRKSHVSTSDLLTWPEAPSSDSSHPPASAPRSHQPSDGVSKVLFGGQITDEEAQSLNKKK 64
           VRK H ST+DLLTW  +P S ++ P AS+ R HQPSD +SKVLFGGQ++ EEA+SL KKK
Sbjct: 7   VRKPHTSTADLLTWKVSPPS-ATPPSASSHRPHQPSDNISKVLFGGQVSQEEAESLMKKK 65

Query: 65  PCSGYKLKEINGSGIFVANGENGASESDAGNRNNRTSVRVYQQAMNGISQISFSAEETVS 124
           PCSGYKL E++GS IF  NG++G SES   N NNRT+VRVYQQA+ G+SQISFSA+E++S
Sbjct: 66  PCSGYKLNEMSGSSIF--NGQDGESESGGANPNNRTTVRVYQQAVTGMSQISFSADESIS 123

Query: 125 PKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPEIQPRSLAAA 184
            KKPTS+PEVAKQRELSG++Q+++D+K+K+QIS+AKFKEISGHDIFSP  EI PRSLA A
Sbjct: 124 LKKPTSIPEVAKQRELSGTMQNDADMKSKRQISNAKFKEISGHDIFSPPDEIVPRSLAVA 183

Query: 185 RSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQKFAELTGN 244
            SLE KE+KD+GEPAPRN+  S+KVSNPAGGQSNILFGEEPV+KT+KKI +QKF ELTGN
Sbjct: 184 HSLEIKENKDIGEPAPRNIHPSIKVSNPAGGQSNILFGEEPVMKTAKKILDQKFHELTGN 243

Query: 245 DIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSISLV 301
           DIFKGDVPPGSAEKPLS AKL+EMSGS+IFAD K  SRDY GGVRKPPGGESSI+LV
Sbjct: 244 DIFKGDVPPGSAEKPLSTAKLKEMSGSDIFADGKAASRDYLGGVRKPPGGESSIALV 300

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451437|ref|XP_004143468.1| PREDICTED: uncharacterized protein LOC101209377 [Cucumis sativus] gi|449504822|ref|XP_004162304.1| PREDICTED: uncharacterized protein LOC101230134 [Cucumis sativus]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 220/296 (74%), Positives = 254/296 (85%), Gaps = 6/296 (2%)

Query: 7   KSHVSTSDLLTWPEAPSSDSSHP-PASAPRSHQPSDGVSKVLFGGQITDEEAQSLNKKKP 65
           KS  ST+DLLTW E P  +SS    ASAPRSHQPSD +SKVL GGQ+TDEEA++L KKK 
Sbjct: 9   KSRPSTADLLTWSELPHPESSPAVSASAPRSHQPSDRISKVLQGGQLTDEEAETLMKKKN 68

Query: 66  CSGYKLKEINGSGIFVANGENGASESDAGNRNNRTSVRVYQQAMNGISQISFSAEETVSP 125
           CSGYK+KE++GSGIF +N E   SE D     N+T +R+YQQ +NG+SQISF+ EE +SP
Sbjct: 69  CSGYKMKEMSGSGIFASNDEGDESELD-----NKTGLRMYQQTLNGVSQISFATEEGLSP 123

Query: 126 KKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPEIQPRSLAAAR 185
           KKPTS+PEVAKQRELSG+LQS+ D ++KKQISDAK KE+SGHDIF   PEI PRSLAAAR
Sbjct: 124 KKPTSIPEVAKQRELSGTLQSDPDARSKKQISDAKNKELSGHDIFGAPPEITPRSLAAAR 183

Query: 186 SLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQKFAELTGND 245
           SLESKESKDMGEPAPR +RTSVKVSNPAGGQSNILFGEEPV+KT+KK+HNQKF ELTGND
Sbjct: 184 SLESKESKDMGEPAPRTLRTSVKVSNPAGGQSNILFGEEPVMKTAKKLHNQKFQELTGND 243

Query: 246 IFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSISLV 301
           IFKGD PPG++EK LS+AKLREMSG++IFAD K ESRDYFGGVRKPPGGES+I+LV
Sbjct: 244 IFKGDAPPGASEKSLSSAKLREMSGNDIFADGKAESRDYFGGVRKPPGGESTIALV 299

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147856521|emb|CAN82836.1| hypothetical protein VITISV_030871 [Vitis vinifera]

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/342 (68%), Positives = 261/342 (76%), Gaps = 45/342 (13%)

Query: 2   ATPVRKSHVSTSDLLTWPEAPSSDSSHPPA------SAPRSHQ---------PSDGVSKV 46
           ATPVRK H ST+DLLTW E P +DS   PA      S  RSHQ         PSDG+SKV
Sbjct: 4   ATPVRKPHTSTADLLTWSEVPPADS---PATGSASRSGARSHQGFDILDIFQPSDGMSKV 60

Query: 47  LFGGQIT-----------DEEAQSLNK----------------KKPCSGYKLKEINGSGI 79
           L G QI+           +    SLN                 +KPCSGYKLKE+ GSGI
Sbjct: 61  LHGVQISPAVSVEYPPTKNITISSLNLFIIFLRPAGTVGFDTFRKPCSGYKLKEMTGSGI 120

Query: 80  FVANGENGASESDAGNRNNRTSVRVYQQAMNGISQISFSAEETVSPKKPTSVPEVAKQRE 139
           F  + E+G SES + N  N+T VR+YQQA+NG+SQISFSAEE++SPKKPTS+PEVAKQRE
Sbjct: 121 FXDDAEDGTSESGSANPINKTGVRIYQQALNGMSQISFSAEESISPKKPTSLPEVAKQRE 180

Query: 140 LSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPEIQPRSLAAARSLESKESKDMGEPA 199
           LSG+L SESD + KKQIS+AK KE+SGHDIFS  PEI PRSL AARSLESKESKDMGEPA
Sbjct: 181 LSGTLASESDPRIKKQISNAKCKELSGHDIFSGPPEILPRSLXAARSLESKESKDMGEPA 240

Query: 200 PRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQKFAELTGNDIFKGDVPPGSAEKP 259
           PRNVRTSVKVSNPAGGQSNILFGEEPVVKT+KKIH+QKFAELTGNDIFKGDVPPGSAEKP
Sbjct: 241 PRNVRTSVKVSNPAGGQSNILFGEEPVVKTAKKIHDQKFAELTGNDIFKGDVPPGSAEKP 300

Query: 260 LSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSISLV 301
           LS AKL+EMSGS+IFAD K ESRDY GGVRKPPGGESSI+L+
Sbjct: 301 LSMAKLKEMSGSDIFADGKAESRDYLGGVRKPPGGESSIALI 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459324|ref|XP_002285796.1| PREDICTED: uncharacterized protein LOC100260886 isoform 1 [Vitis vinifera] gi|147861247|emb|CAN81471.1| hypothetical protein VITISV_020507 [Vitis vinifera] gi|302141947|emb|CBI19150.3| unnamed protein product [Vitis vinifera]

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 219/306 (71%), Positives = 250/306 (81%), Gaps = 20/306 (6%)

Query: 2   ATPVRKSHVSTSDLLTWPEAPSSDSSHPPASAPR----SHQPSDGVSKVLFGGQITDEEA 57
           ATPVRK H ST+DLLTW E P +DS   PASA R    SHQPSDG+SKV+FGGQ+TDEEA
Sbjct: 4   ATPVRKPHTSTADLLTWSETPPADS---PASASRPAVRSHQPSDGISKVVFGGQVTDEEA 60

Query: 58  QSLNKKKPCSGYKLKEINGSGIFVANGENGASESDAGNR--NNRTSVRVYQQAMNGISQI 115
           ++L+K+KPCSGYKLKEI GSGIF   GENG SES + N   NN+T+VR+YQQA   ISQI
Sbjct: 61  EALSKRKPCSGYKLKEITGSGIFALEGENGTSESGSANPTPNNKTTVRIYQQAAAAISQI 120

Query: 116 SFSAEETVSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPE 175
           SF  EE+VSPKKPT++PEVAKQRELSG+L+SE + K +KQ+SDAK KE+SGHDIF+P PE
Sbjct: 121 SFGTEESVSPKKPTTLPEVAKQRELSGTLESE-ETKMQKQLSDAKCKELSGHDIFAPPPE 179

Query: 176 IQPRSLAAARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHN 235
           I PR  +AARSL  KESKDMGEPAPRN         PAGGQSNI+F +E V+KT+KKIHN
Sbjct: 180 ILPRP-SAARSLVLKESKDMGEPAPRN---------PAGGQSNIMFSDETVLKTAKKIHN 229

Query: 236 QKFAELTGNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGE 295
           QKF ELTGNDIFKGDVPP SAEK LS AKLREMSG++IFAD K ESRDY GGVRKPPGGE
Sbjct: 230 QKFVELTGNDIFKGDVPPSSAEKSLSMAKLREMSGNDIFADGKAESRDYLGGVRKPPGGE 289

Query: 296 SSISLV 301
           SSI+LV
Sbjct: 290 SSIALV 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096181|ref|XP_002310565.1| predicted protein [Populus trichocarpa] gi|118485862|gb|ABK94778.1| unknown [Populus trichocarpa] gi|222853468|gb|EEE91015.1| predicted protein [Populus trichocarpa]

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/297 (75%), Positives = 259/297 (87%), Gaps = 3/297 (1%)

Query: 5   VRKSHVSTSDLLTWPEAPSSDSSHPPASAPRSHQPSDGVSKVLFGGQITDEEAQSLNKKK 64
           V K H ST+DLLTW EAP S S    AS+ R HQPSD +SKVLFGGQ++ EEA+SL KKK
Sbjct: 7   VSKPHTSTADLLTWKEAPPSASPSS-ASSHRPHQPSDKISKVLFGGQVSQEEAESLMKKK 65

Query: 65  PCSGYKLKEINGSGIFVANGENGASESDAGNRNNRTSVRVYQQAMNGISQISFSAEETVS 124
           PCSGYKLKE+ GSGIF  NG++G SES   N NN+T+VRVYQQA+ GISQISFS+EE++S
Sbjct: 66  PCSGYKLKEMTGSGIF--NGQDGTSESGDANPNNKTTVRVYQQAVTGISQISFSSEESIS 123

Query: 125 PKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPEIQPRSLAAA 184
           PKKPTSVPEVAKQRELSG+LQ++ D+K+ K IS+AKFKEISGHDIF+P  EI PRSLAAA
Sbjct: 124 PKKPTSVPEVAKQRELSGTLQNDFDMKSNKLISNAKFKEISGHDIFAPPSEIAPRSLAAA 183

Query: 185 RSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQKFAELTGN 244
           RS+E+KE+KD+GEPAPRN+RTSV+VSNPAGGQSNILFGEEPV+KT++KIHNQKF ELTGN
Sbjct: 184 RSMETKENKDIGEPAPRNIRTSVRVSNPAGGQSNILFGEEPVMKTARKIHNQKFNELTGN 243

Query: 245 DIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSISLV 301
            IFKGDVPPGSAEKPLS AKLREMSGS IF+D K  SRDY GGVR+PPGG+SSI+LV
Sbjct: 244 GIFKGDVPPGSAEKPLSTAKLREMSGSGIFSDGKAPSRDYLGGVRQPPGGQSSIALV 300

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	301
TAIR|locus:2140000	299	AT4G39860 "AT4G39860" [Arabido	0.980	0.986	0.695	3.3e-102
TAIR|locus:2060425	328	AT2G22270 "AT2G22270" [Arabido	0.707	0.649	0.557	7.2e-52
TAIR|locus:2011375	286	AT1G35780 "AT1G35780" [Arabido	0.807	0.849	0.455	5.2e-49
TAIR|locus:2060430	314	ALKBH2 "homolog of E. coli alk	0.255	0.245	0.4	7.5e-05

TAIR|locus:2140000 AT4G39860 "AT4G39860" [Arabidopsis thaliana (taxid:3702)]

 Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
 Identities = 208/299 (69%), Positives = 237/299 (79%)

Query:     3 TPVRKSHVSTSDLLTWXXXXXXXXXXXXXXXXXXXXXXDGVSKVLFGGQITDEEAQSLNK 62
             TPVR  H ST+DLL+W                      DG+SK+L GGQITDEEAQSLNK
Sbjct:     5 TPVRNPHTSTADLLSWSETPPPPHHSTPSAARSHQPS-DGISKILGGGQITDEEAQSLNK 63

Query:    63 KKPCSGYKLKEINGSGIFVANGENGASESDAGNRNNRTSVRVYQQAMNGISQISFSAEET 122
              K CSGYKLKE+ GSGIF   G+ G SESDA   + +T +R YQQ +NG+SQISFSA+  
Sbjct:    64 LKNCSGYKLKEMTGSGIFTDKGKVG-SESDA-TTDPKTGLRYYQQTLNGMSQISFSADGN 121

Query:   123 VSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPEIQPRSLA 182
             VSPKKPT++ EVAKQRELSG+L +E+DLK+ KQIS AK +EISGHDIF+P  EIQPRSL 
Sbjct:   122 VSPKKPTTLTEVAKQRELSGNLLTEADLKSNKQISSAKIEEISGHDIFAPPSEIQPRSLV 181

Query:   183 AARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQKFAELT 242
             AA+  E++ ++DMGEPAPRN+RTSVKVSNPAGGQSNILF EEPVVKTSKKIHNQKF ELT
Sbjct:   182 AAQQ-EARGNRDMGEPAPRNLRTSVKVSNPAGGQSNILFSEEPVVKTSKKIHNQKFQELT 240

Query:   243 GNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSISLV 301
             GN IFKGD  PGSA+K LS+AKLREMSG+NIFAD K ESRDYFGGVRKPPGGESSISLV
Sbjct:   241 GNGIFKGDESPGSADKQLSSAKLREMSGNNIFADGKSESRDYFGGVRKPPGGESSISLV 299

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0000280 "nuclear division" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006342 "chromatin silencing" evidence=RCA

GO:0007000 "nucleolus organization" evidence=RCA

GO:0008283 "cell proliferation" evidence=RCA

GO:0016572 "histone phosphorylation" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2060425 AT2G22270 "AT2G22270" [Arabidopsis thaliana (taxid:3702)]

 Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
 Identities = 126/226 (55%), Positives = 156/226 (69%)

Query:    83 NGENGASESDAG--NRNNRTSVRVYQQAMNGISQISFSAEETVSPKKPTSVPEVAKQREL 140
             +GE  A+    G  + N++T +  +Q      SQISFS EE V+PKKPT++ E AKQ+EL
Sbjct:   109 SGEENATTPMNGKDDPNHQTRIHYHQDQR---SQISFSGEENVTPKKPTTLNEAAKQKEL 165

Query:   141 SGSLQSESDLKTKK-QISDAKFKEISGHDIFSPAPEIQPRSL-AAARSLESKESKDMGEP 198
             S ++++++D K KK QIS+ K K +SGHDIF+ +PE QPR L   A   E K +K+  E 
Sbjct:   166 SRTVETQADSKCKKKQISNTKNKAMSGHDIFA-SPESQPRRLFGGATQSEVKGNKNTEES 224

Query:   199 APRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQK--FAELTGNDIFKGD-VPPGS 255
             APR+ R SVK SN  G  SN LF EE VVK+SKKIHNQK  F  LT N IFK D +PPG 
Sbjct:   225 APRSSRASVKTSN--GQSSNRLFSEEHVVKSSKKIHNQKSQFQGLTSNGIFKSDKIPPGY 282

Query:   256 AEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSISLV 301
             +EK  S+AK REMSG NIFAD K E RDY+GG R+PPGGESSISLV
Sbjct:   283 SEKMQSSAKKREMSGHNIFADGKSEYRDYYGGARRPPGGESSISLV 328

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2011375 AT1G35780 "AT1G35780" [Arabidopsis thaliana (taxid:3702)]

 Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
 Identities = 117/257 (45%), Positives = 155/257 (60%)

Query:     3 TPVRKSHVSTSDLLTWXXXXXXXXXXXXXXXXXXXXX--XDGVSKVLFGGQITDEEAQSL 60
             TPVRK H+ST+DLLTW                        DG+SKV+FGGQ+TDEE +SL
Sbjct:     5 TPVRKPHMSTADLLTWPENQPFESPAAVSSRSAARSHQPSDGISKVVFGGQVTDEEVESL 64

Query:    61 NKKKPCSGYKLKEINGSGIFVANGENGASESDAGNRNNRTSVRVYQQAMNGI-SQISFSA 119
             NK+KPCS YK+KEI GSGIF    EN  SE  + N       R +QQ    I S ISF  
Sbjct:    65 NKRKPCSNYKMKEITGSGIFSVYEENDDSELASANSATNGKSRTFQQPPAAIMSHISFGE 124

Query:   120 EETVSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPEIQPR 179
             EE V+PKKP +VPEVAKQRELSG+L+ +SD K  KQ SDAK KE+SGH+IF+P PEI+ R
Sbjct:   125 EEIVTPKKPATVPEVAKQRELSGTLEYQSDAKLNKQFSDAKCKELSGHNIFAPPPEIKLR 184

Query:   180 SLAAARSLESKESKDMGEPAPR---NVRTSVKVSNP--AGGQSNILFGEE---PVVKTSK 231
                  R+L  K++ D+GE   +    ++T+ K+++        N +F  +   P   T++
Sbjct:   185 P--TVRALAYKDNFDLGESDTKPDGELKTAKKIADRKFTDLSGNNVFKSDVSSPSSATAE 242

Query:   232 KI-HNQKFAELTGNDIF 247
             ++    K  E++GNDIF
Sbjct:   243 RLLSTAKLKEISGNDIF 259

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2060430 ALKBH2 "homolog of E. coli alkB" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 7.5e-05, P = 7.4e-05
 Identities = 36/90 (40%), Positives = 46/90 (51%)

Query:    41 DGVSKVLFGGQITDEEAQSLNKKKPCSGYKLKEINGSGIFVANGENGASESDAGNRNNRT 100
             DG+S     GQIT+EEA+SL  KK CSG+KLKE+  S  F    +NG  +SD   R +  
Sbjct:    19 DGISD----GQITNEEAESLINKKNCSGHKLKEVTDSDTF---SDNGKDDSDTKKRFH-- 69

Query:   101 SVRVYQQAMNGISQISFSAEETVSPKKPTS 130
                 Y Q    +S  S  A E+ S     S
Sbjct:    70 ----YHQDQRRMSLTSIVAVESPSSSNAPS 95


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.306   0.126   0.342    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      301       279   0.00081  115 3  11 23  0.37    35
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  573 (61 KB)
  Total size of DFA:  158 KB (2094 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.29u 0.18s 27.47t   Elapsed:  00:00:01
  Total cpu time:  27.29u 0.18s 27.47t   Elapsed:  00:00:01
  Start:  Sat May 11 09:09:42 2013   End:  Sat May 11 09:09:43 2013

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0006281 "DNA repair" evidence=IDA

GO:0035514 "DNA demethylase activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	301
pfam13266	297	pfam13266, DUF4057, Protein of unknown function (D	1e-158

>gnl|CDD|222016 pfam13266, DUF4057, Protein of unknown function (DUF4057)

 Score =  441 bits (1137), Expect = e-158
 Identities = 229/300 (76%), Positives = 254/300 (84%), Gaps = 6/300 (2%)

Query: 2   ATPVRKSHVSTSDLLTWPEAPSSDS-SHPPASAPRSHQPSDGVSKVLFGGQITDEEAQSL 60
           ATPVRK H ST+DLLTW E P  DS +   A A R HQPSDG+SKV+FGGQ+TDEEA+SL
Sbjct: 2   ATPVRKPHTSTADLLTWSETPPPDSPASTSAPARRPHQPSDGISKVVFGGQVTDEEAESL 61

Query: 61  NKKKPCSGYKLKEINGSGIFVANGENGASESDAGNRN-NRTSVRVYQQAMNGISQISFSA 119
           NK+KPCSGYKLKE+ GSGIF ANGEN ASES + N   N+TS+R   QA  GISQISFS 
Sbjct: 62  NKRKPCSGYKLKEMTGSGIFAANGENDASESASANPTANKTSLR---QAQAGISQISFSE 118

Query: 120 EETVSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPEIQPR 179
           EE+VSPKKPTSVPEVAKQRELSG+L+SE+D K KKQIS+AK KE+SGHDIF+P PEI+PR
Sbjct: 119 EESVSPKKPTSVPEVAKQRELSGTLESEADSKMKKQISNAKSKELSGHDIFAPPPEIKPR 178

Query: 180 SLAAARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQKFA 239
           SLAA   LE KE+KD GEPAPRN RTSVKVSNPAGGQSNI F E+ VVKT+KKIHNQKF 
Sbjct: 179 SLAARL-LELKENKDRGEPAPRNARTSVKVSNPAGGQSNIEFSEDSVVKTAKKIHNQKFT 237

Query: 240 ELTGNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSIS 299
           ELTGN+IFKGDVPP SAEKPLS AKL+EMSGSNIFAD K ESRDY GGVRKPPGGESSI+
Sbjct: 238 ELTGNNIFKGDVPPASAEKPLSTAKLKEMSGSNIFADGKAESRDYLGGVRKPPGGESSIA 297

This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 279 and 322 amino acids in length. Length = 297

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	301
PF13266	302	DUF4057: Protein of unknown function (DUF4057)	100.0
PF13266	302	DUF4057: Protein of unknown function (DUF4057)	99.97

>PF13266 DUF4057: Protein of unknown function (DUF4057)

Probab=100.00  E-value=1e-132  Score=927.51  Aligned_cols=297  Identities=78%  Similarity=1.148  Sum_probs=290.2

Q ss_pred             CCCCCCCCCCccccccCCCCCCCCCC---CCCCCCCCCCCCCCCceeeeeCCcCCHHHHHhhhhcCCCCccccccccCCC
Q 022179            2 ATPVRKSHVSTSDLLTWPEAPSSDSS---HPPASAPRSHQPSDGVSKVLFGGQITDEEAQSLNKKKPCSGYKLKEINGSG   78 (301)
Q Consensus         2 ~~pvr~~h~st~dll~w~~~~~~~~~---~~~~~~~R~~Qps~gis~v~Fg~q~T~eeae~l~krk~cS~~K~KEmtGSg   78 (301)
                      ++|||+|||||||||+|+|+|+++.+   +++++++|+|||++|||+|+||+|||+||||+|+||||||+||||||||||
T Consensus         2 ~~pvR~~HtsTadLltWse~~~~~~~~~~~~~~~a~RshQPs~giskv~fGgQvT~EEAEsL~KRKpCS~~K~KEmTGSG   81 (302)
T PF13266_consen    2 ATPVRKPHTSTADLLTWSETPPPDSPAASSTSRPARRSHQPSDGISKVVFGGQVTEEEAESLNKRKPCSGYKMKEMTGSG   81 (302)
T ss_pred             CCCccCCCcCchhhccccCCCCcccccccCCCCCCCCCCCCcccccccccCCcCCHHHHHHHhccCcCccccceeccccc
Confidence            68999999999999999999987665   367899999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCC-CCCcceeeecccccccceeeecCCcccCCCCCCChHHHhhhhhccCccccchhhhhccccc
Q 022179           79 IFVANGENGASESDAGNR-NNRTSVRVYQQAMNGISQISFSAEETVSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQIS  157 (301)
Q Consensus        79 IF~~~~e~~~~~~~~~~~-~~~tsvr~~qqa~~g~SqIsFg~e~~vsPkKpts~~evAkQrelsgt~e~e~d~k~kKq~S  157 (301)
                      ||++++++++++.+.+|+ ++||+||||||+++|||||||++||+|+|||||||+|||||||||||||+|+|++++||+|
T Consensus        82 IF~~~~e~~~se~~san~~~~rt~vr~yQq~~~giSqISF~~eesvsPKKpts~~EVAKQRELSGTlese~D~k~kkq~S  161 (302)
T PF13266_consen   82 IFSANGEDDASESGSANPTPNRTGVRMYQQAINGISQISFSEEESVSPKKPTSLPEVAKQRELSGTLESEADSKMKKQIS  161 (302)
T ss_pred             ccccCCCCcccccccCCCCccccccceecccccccceeeecCCCCcCCCCccchHHHHHHhhhcCccccchhhHHHhhhh
Confidence            999999999999999987 7899999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhccCCCCCCCCCCCCchhHHhhhhccccccCCCCCCCCCccccccccCCCCCCCccccCCCCcccccccchhhh
Q 022179          158 DAKFKEISGHDIFSPAPEIQPRSLAAARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQK  237 (301)
Q Consensus       158 ~aK~KELSGsdIFapppe~~prs~a~ar~~~~~~~~~~g~p~prn~~t~vr~~~p~gG~S~IsF~ee~~vkt~Kkis~~K  237 (301)
                      +||+|||||||||+||++++|+++ .+|.||.+|+++++++.||++++++++.+++||+|+|.|++|++||++||||++|
T Consensus       162 ~AK~KELSGhdIFapp~~~~pr~~-~~r~le~k~~~~~~e~~~~~~~ts~~~~n~a~~~s~~~~~~~~~~Ktakki~~~K  240 (302)
T PF13266_consen  162 NAKSKELSGHDIFAPPPEIKPRSL-TARSLELKENKDRGEPAPRNVRTSVKVSNPAGGQSNIEFGEDSVVKTAKKISNQK  240 (302)
T ss_pred             hhhhhhcccCcccCCCccCCCCcc-hhhhhhhcccccccCCCCCcccccccccCCcCcccccccccCcchhhhhhhhhhh
Confidence            999999999999999999999998 5899999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcCCcccCCCCCCCCCCCCCchhhhhhccCCCCCCCCcccccccCCCcccCCCCCCCcc
Q 022179          238 FAELTGNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSIS  299 (301)
Q Consensus       238 ~aELsGn~IFk~D~~p~~~eK~lS~AKlkEmSG~dIFAdgk~~~rd~~gg~rkpPGgeSsIa  299 (301)
                      |+||+|||||++|.++.++||+||.||||||+|+|||||+|+++|||+|||||||||+||||
T Consensus       241 ~aeltGN~IFk~d~p~~saek~lS~AKlrEmsGsdIFaDgk~~~rd~~gg~rkPPGG~SSIa  302 (302)
T PF13266_consen  241 FAELTGNNIFKGDVPPASAEKPLSSAKLREMSGSDIFADGKAESRDYLGGVRKPPGGESSIA  302 (302)
T ss_pred             hhhcccCcccCCCCCCCCcccchhhhhHhhcccccccccCCcccchhcCCccCCCCCCCcCC
Confidence            99999999999999999999999999999999999999999999999999999999999997

>PF13266 DUF4057: Protein of unknown function (DUF4057)

Probab=99.97  E-value=1.5e-32  Score=256.96  Aligned_cols=161  Identities=34%  Similarity=0.477  Sum_probs=143.2

Q ss_pred             CCCCCCCCCC-CCCceeeeeCCcC---------------------CHHHHHhhhhcCCCCccccccccCCCcccCCCCCC
Q 022179           30 PASAPRSHQP-SDGVSKVLFGGQI---------------------TDEEAQSLNKKKPCSGYKLKEINGSGIFVANGENG   87 (301)
Q Consensus        30 ~~~~~R~~Qp-s~gis~v~Fg~q~---------------------T~eeae~l~krk~cS~~K~KEmtGSgIF~~~~e~~   87 (301)
                      -++++||||+ .+|||+|+||++.                     |.|...+++.+|++|++|.|||+||+||+++.+..
T Consensus       102 ~rt~vr~yQq~~~giSqISF~~eesvsPKKpts~~EVAKQRELSGTlese~D~k~kkq~S~AK~KELSGhdIFapp~~~~  181 (302)
T PF13266_consen  102 NRTGVRMYQQAINGISQISFSEEESVSPKKPTSLPEVAKQRELSGTLESEADSKMKKQISNAKSKELSGHDIFAPPPEIK  181 (302)
T ss_pred             cccccceecccccccceeeecCCCCcCCCCccchHHHHHHhhhcCccccchhhHHHhhhhhhhhhhcccCcccCCCccCC
Confidence            4799999976 5799999999887                     66755578888999999999999999999999988


Q ss_pred             CCC--------------CCCCCCCCCcceeeecccccccceeeecCCcccCCCCCCChHHHhhhhhccCccccchhhhhc
Q 022179           88 ASE--------------SDAGNRNNRTSVRVYQQAMNGISQISFSAEETVSPKKPTSVPEVAKQRELSGSLQSESDLKTK  153 (301)
Q Consensus        88 ~~~--------------~~~~~~~~~tsvr~~qqa~~g~SqIsFg~e~~vsPkKpts~~evAkQrelsgt~e~e~d~k~k  153 (301)
                      ++.              ..+++++.+|+++++.++ +|.|+|.|++                           +.++|+.
T Consensus       182 pr~~~~r~le~k~~~~~~e~~~~~~~ts~~~~n~a-~~~s~~~~~~---------------------------~~~~Kta  233 (302)
T PF13266_consen  182 PRSLTARSLELKENKDRGEPAPRNVRTSVKVSNPA-GGQSNIEFGE---------------------------DSVVKTA  233 (302)
T ss_pred             CCcchhhhhhhcccccccCCCCCcccccccccCCc-Cccccccccc---------------------------Ccchhhh
Confidence            876              224556789999999976 9999999999                           5678889


Q ss_pred             cccchhhhhhhccCCCCC----CCCCCCCchhHHhhhhccccccCCCCCCCCCccccccccCCCCCCCccc
Q 022179          154 KQISDAKFKEISGHDIFS----PAPEIQPRSLAAARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNIL  220 (301)
Q Consensus       154 Kq~S~aK~KELSGsdIFa----pppe~~prs~a~ar~~~~~~~~~~g~p~prn~~t~vr~~~p~gG~S~Is  220 (301)
                      |.++++|+.||+|||||.    +...+++.+.|++|+|.+.+||+||+|..|++++++|  +|+||.|+|.
T Consensus       234 kki~~~K~aeltGN~IFk~d~p~~saek~lS~AKlrEmsGsdIFaDgk~~~rd~~gg~r--kPPGG~SSIa  302 (302)
T PF13266_consen  234 KKISNQKFAELTGNNIFKGDVPPASAEKPLSSAKLREMSGSDIFADGKAESRDYLGGVR--KPPGGESSIA  302 (302)
T ss_pred             hhhhhhhhhhcccCcccCCCCCCCCcccchhhhhHhhcccccccccCCcccchhcCCcc--CCCCCCCcCC
Confidence            999999999999999998    3447788999999999999999999999999999998  9999999984

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00