Citrus Sinensis ID: 022197

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-
Protein Sequence
MNKNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQFHNVNILTCEYACLVNTH
Secondary Structure (PSIPRED)
ccccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccHHEHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEccc
Coil and Loop (DISEMBL)
MNKNEEQTRSLFgisltdrpkwqqFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGfttkqmmnpwKTYVKLSAVLMgshgltkgslAFLNYPAQLMFKSTKVLPVMVMgafipglrrkypaHEYVSALLLVVGLILFTLadaqtspnfsMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTvvglpmlippmlltGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAattamvnpshkleafpqfhnvniLTCEYACLVNTH
Flexible Loop (DISEMBL)
mnkneeqtrslfgisltdrpkWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQFHNVNILTCEYACLVNTH
Low Complexity Region (SEG)
MNKNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYvsalllvvglilftlADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQFHNVNILTCEYACLVNTH
Disordered region (IsUnstruct)
**********LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQFHNVNILTCEYACLV***
Disordered Region (DISOPRED)
****************TDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADA*****FSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQFHNVNILTCEYACLVNTH
Disordered Region (DISEMBL)
*********SLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQFHNVNILTCEYACLVNTH
Disordered Region (DISPRO)
******QTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQFHNVNILTCEYACLVNTH
Transmembrane Helix (TMHMM)
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNKNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQFHNVNILTCEYACLVNTH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	301	2.2.26 [Sep-21-2011]
Q29Q28	345	UDP-galactose/UDP-glucose	yes	no	0.870	0.759	0.870	1e-135
Q9LDX3	349	UDP-galactose/UDP-glucose	no	no	0.877	0.756	0.856	1e-134
Q5R831	401	Adenosine 3'-phospho 5'-p	yes	no	0.877	0.658	0.350	2e-36
Q9H1N7	401	Adenosine 3'-phospho 5'-p	yes	no	0.877	0.658	0.350	5e-36
Q922Q5	369	Adenosine 3'-phospho 5'-p	no	no	0.877	0.715	0.354	3e-35
Q17CE7	382	Adenosine 3'-phospho 5'-p	N/A	no	0.903	0.712	0.334	2e-33
Q7Q5D4	377	Adenosine 3'-phospho 5'-p	yes	no	0.910	0.726	0.320	8e-33
Q9VVD9	396	Adenosine 3'-phospho 5'-p	yes	no	0.857	0.651	0.338	4e-32
Q29EY2	392	Adenosine 3'-phospho 5'-p	yes	no	0.863	0.663	0.333	4e-32
Q61LC0	363	Adenosine 3'-phospho 5'-p	N/A	no	0.887	0.735	0.323	7e-31

>sp|Q29Q28|UTR2_ARATH UDP-galactose/UDP-glucose transporter 2 OS=Arabidopsis thaliana GN=UTR2 PE=2 SV=1

 Score =  482 bits (1240), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 228/262 (87%), Positives = 249/262 (95%)

Query: 4   NEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQG 63
            EEQTRSLFGISL+D+P WQQFLIC+SGFFFGYLVNGVCEEYVYNRLQFS+GWYFTFIQG
Sbjct: 2   KEEQTRSLFGISLSDKPTWQQFLICTSGFFFGYLVNGVCEEYVYNRLQFSFGWYFTFIQG 61

Query: 64  FVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLP 123
           FVYL LIYLQGFTTK ++NP +TYVKLSAVLMGSHGLTKGSLA+LNYPAQ+MFKSTKVLP
Sbjct: 62  FVYLFLIYLQGFTTKHIVNPMRTYVKLSAVLMGSHGLTKGSLAYLNYPAQIMFKSTKVLP 121

Query: 124 VMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDS 183
           VM+MGAFIPGLRRKYP HEY+SA LLV+GLILFTLADAQ SPNFSMIG++MI+GALIMD+
Sbjct: 122 VMIMGAFIPGLRRKYPVHEYISAFLLVLGLILFTLADAQMSPNFSMIGIMMITGALIMDA 181

Query: 184 FLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVL 243
           FLGNLQEAIFTMNPETTQMEMLFCSTVVGLP L  PM+LTGE+F+AW +C+QH YVYGVL
Sbjct: 182 FLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLFVPMVLTGEVFRAWTACAQHPYVYGVL 241

Query: 244 VFEAMATFIGQVSVLSLIALFG 265
           VFEAMATFIGQVSVLSLIALFG
Sbjct: 242 VFEAMATFIGQVSVLSLIALFG 263

Sugar transporter involved in the transport of UDP-galactose form the cytoplasm into the Golgi apparatus.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDX3|UTR4_ARATH UDP-galactose/UDP-glucose transporter 4 OS=Arabidopsis thaliana GN=UTR4 PE=2 SV=1

 Score =  478 bits (1229), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 226/264 (85%), Positives = 246/264 (93%)

Query: 2   NKNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFI 61
             +EEQ   LFGI L+D+P+WQQFLICSSGFFFGYLVNG+CEEYVYNRL+FSYGWYFTF 
Sbjct: 3   TNSEEQMIKLFGIPLSDKPRWQQFLICSSGFFFGYLVNGICEEYVYNRLKFSYGWYFTFA 62

Query: 62  QGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKV 121
           QG VY+ LIY+ GF TKQM+NPWKTYVKLS VLMGSHGLTKGSLA+LNYPAQ+MFKSTKV
Sbjct: 63  QGLVYIALIYMYGFRTKQMVNPWKTYVKLSGVLMGSHGLTKGSLAYLNYPAQIMFKSTKV 122

Query: 122 LPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIM 181
           LPVMVMGAFIPGLRRKYP HEY+SA+LLV+GLILFTLADA TSPNFS+IGV+MISGALIM
Sbjct: 123 LPVMVMGAFIPGLRRKYPVHEYISAMLLVIGLILFTLADAHTSPNFSIIGVMMISGALIM 182

Query: 182 DSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYG 241
           D+FLGNLQEAIFTMNPETTQMEMLFCSTVVGLP L+ PM+LTGELF AWNSC+QH YVYG
Sbjct: 183 DAFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLLAPMILTGELFTAWNSCAQHPYVYG 242

Query: 242 VLVFEAMATFIGQVSVLSLIALFG 265
           VLVFEAMATFIGQVSVLSLIALFG
Sbjct: 243 VLVFEAMATFIGQVSVLSLIALFG 266

Sugar transporter involved in the transport of nucleotide-sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5R831|S35B3_PONAB Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Pongo abelii GN=SLC35B3 PE=2 SV=1

 Score =  153 bits (386), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 154/271 (56%), Gaps = 7/271 (2%)

Query: 11  LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQF-SYGWYFTFIQGFVYLV- 68
           + G++L+   K  QF IC +G F  YL+ G  +E +++   F SYGWY T +Q   Y + 
Sbjct: 67  VLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSYGWYLTLVQFAFYSIF 126

Query: 69  -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
            LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct: 127 GLIELQPIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 186

Query: 128 GAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGN 187
           G FI G  ++Y   +  +A+ + +GLI FTLAD+  +PNF++ GV++IS AL  D+ +GN
Sbjct: 187 GVFIQG--KRYNVADVSAAICMSLGLIWFTLADSTIAPNFNLTGVVLISLALCADAVIGN 244

Query: 188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
           +QE    ++   +  EM+  S  +G   ++  +  T  L  A   C+++ +  YG     
Sbjct: 245 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYAFLF 303

Query: 247 AMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
           ++  + G   VL+LI +FGA     V    K
Sbjct: 304 SLTGYFGISFVLALIKIFGALIAVTVTTGRK 334

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Compensates for the insufficient expression of SLC35B2/PAPST1 during the synthesis of sulfated glycoconjugates in the colon.

Pongo abelii (taxid: 9601)

>sp|Q9H1N7|S35B3_HUMAN Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Homo sapiens GN=SLC35B3 PE=1 SV=1

 Score =  151 bits (382), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 154/271 (56%), Gaps = 7/271 (2%)

Query: 11  LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQF-SYGWYFTFIQGFVYLV- 68
           + G++L+   K  QF IC +G F  YL+ G  +E +++   F S GWY T +Q   Y + 
Sbjct: 67  VLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSCGWYLTLVQFAFYSIF 126

Query: 69  -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
            LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct: 127 GLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 186

Query: 128 GAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGN 187
           G FI G  ++Y   +  +A+ + +GLI FTLAD+ T+PNF++ GV++IS AL  D+ +GN
Sbjct: 187 GVFIQG--KRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADAVIGN 244

Query: 188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
           +QE    ++   +  EM+  S  +G   ++  +  T  L  A   C+++ +  YG     
Sbjct: 245 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYAFLF 303

Query: 247 AMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
           ++  + G   VL+LI +FGA     V    K
Sbjct: 304 SLTGYFGISFVLALIKIFGALIAVTVTTGRK 334

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Compensates for the insufficient expression of SLC35B2/PAPST1 during the synthesis of sulfated glycoconjugates in the colon.

Homo sapiens (taxid: 9606)

>sp|Q922Q5|S35B3_MOUSE Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Mus musculus GN=Slc35b3 PE=2 SV=1

 Score =  149 bits (375), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/271 (35%), Positives = 154/271 (56%), Gaps = 7/271 (2%)

Query: 11  LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLV- 68
           + G++L+   K  QFLIC +G F  YL+ G  +E +++   F  YGWY T +Q   Y V 
Sbjct: 35  VLGVNLSKFSKLTQFLICVAGVFVFYLIYGYLQELIFSVEGFKPYGWYLTLVQFAFYSVF 94

Query: 69  -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
            LI LQ    ++   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct: 95  GLIELQLTQDRRRRIPGKTYMLIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 154

Query: 128 GAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGN 187
           G FI G  ++Y   +  +A+ + +GLI FTLAD+  +PNF++ GV++IS AL  D+ +GN
Sbjct: 155 GVFIQG--KRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGN 212

Query: 188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
           +QE    ++   +  EM+  S  +G   ++  +  T  L  A   CS++ +  YG     
Sbjct: 213 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLSCTSGLGPAVAFCSKNPVGTYGYAFLF 271

Query: 247 AMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
           ++  + G   VL+LI +FGA     V    K
Sbjct: 272 SLTGYFGISFVLALIKIFGALLAVTVTTGRK 302

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Compensates for the insufficient expression of SLC35B2/PAPST1 during the synthesis of sulfated glycoconjugates in the colon.

Mus musculus (taxid: 10090)

>sp|Q17CE7|S35B3_AEDAE Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Aedes aegypti GN=Papst2 PE=3 SV=1

 Score =  143 bits (360), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 160/281 (56%), Gaps = 9/281 (3%)

Query: 2   NKNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTF 60
           +++ ++ + LF   LT      +FL+C +G F  YL+ G  +E ++    F  YGW+ T 
Sbjct: 32  DEDRKEVKILF-FDLTYYNTTTKFLLCCAGVFVLYLLYGYMQELIFTLDGFKPYGWFLTL 90

Query: 61  IQGFVYLVLIYLQ-GFTTKQMMN--PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFK 117
           +Q   Y V  Y++    +K++    P KTYV L+ + +G+ GL+  SL +LNYP Q++FK
Sbjct: 91  VQFAYYTVFGYVERSLESKRVPRCIPMKTYVLLAFLTLGTMGLSNSSLGYLNYPTQVIFK 150

Query: 118 STKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISG 177
             K++PV++    I G  +K+   ++++A+ + +GL LFTLAD+Q SPNF+  GV++IS 
Sbjct: 151 CCKLVPVLIGSILIQG--KKHGPLDFLAAIAMCLGLTLFTLADSQVSPNFNPFGVLLISL 208

Query: 178 ALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH- 236
           AL+ D+ +GN+QE     + +    E++  S  +G   L   MLLTG LF     C ++ 
Sbjct: 209 ALLCDAAIGNVQEKAMREH-KAPNNEVVIYSYGIGFVYLSVIMLLTGNLFSGITFCMKYP 267

Query: 237 LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
           +  +G     +++ ++G   VL+L+   GA   A V  + K
Sbjct: 268 VETFGYAFLFSLSGYLGIQIVLTLVRTCGAPLAATVTTARK 308

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).

Aedes aegypti (taxid: 7159)

>sp|Q7Q5D4|S35B3_ANOGA Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Anopheles gambiae GN=Papst2 PE=3 SV=4

 Score =  140 bits (354), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 151/290 (52%), Gaps = 16/290 (5%)

Query: 1   MNKNEEQTRS--------LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQF 52
           +N+N  + R         +    LT   +  QFL+C  G F  YLV G  +E ++    F
Sbjct: 16  LNRNRHRDRDQSPEREIKILFFDLTHYNRTTQFLLCCGGVFALYLVYGYMQELIFTLEGF 75

Query: 53  S-YGWYFTFIQGFVYLVLIYLQG---FTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL 108
             YGWY T +Q   Y    Y++     TT     P +TY  L+ + +G+ GL+  S+ +L
Sbjct: 76  RPYGWYLTLVQFAYYTAFGYIERSVERTTVPRCIPLRTYALLAFLTLGTMGLSNSSVGYL 135

Query: 109 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 168
           NYP Q++FK  K++PV++    I G  +K+   ++ +A  + +GLILFTLAD+Q  P+F+
Sbjct: 136 NYPTQVIFKCCKLIPVLIGSVLIQG--KKHGPMDFFAATAMCLGLILFTLADSQVQPDFN 193

Query: 169 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFK 228
             GV +IS AL+ D+ +GN+QE     +      E++  S  +G   L   MLL+G L +
Sbjct: 194 RFGVFLISLALLCDAAIGNVQEKAMREH-RAPNNEVVIYSYGIGFVYLAVIMLLSGHLVQ 252

Query: 229 AWNSCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
               C+++ +  YG     ++  ++G   VL+L+   GA   A V  + K
Sbjct: 253 GVAFCARYPMETYGYAFLFSLTGYLGIQIVLTLVRTCGAPLAATVTTARK 302

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).

Anopheles gambiae (taxid: 7165)

>sp|Q9VVD9|S35B3_DROME Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Drosophila melanogaster GN=Papst2 PE=1 SV=2

 Score =  138 bits (348), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/281 (33%), Positives = 153/281 (54%), Gaps = 23/281 (8%)

Query: 15  SLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVY----LVL 69
            LT   +  QFL+  +G FF Y++ G  +E ++    F  YGW+ T +Q   Y    LV 
Sbjct: 52  DLTYYNRTTQFLLSCAGVFFLYILYGYLQELIFTVEGFKPYGWFLTLVQFGYYIGFGLVE 111

Query: 70  IYLQGFTT----------KQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKST 119
             L+G+            +    P +TY+ L+A+ +G+ GL+  SL +LNYP Q++FK  
Sbjct: 112 RRLEGYRISGGSFWNIEPEPRCIPMRTYLILAALTLGTMGLSNSSLGYLNYPTQVIFKCC 171

Query: 120 KVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGAL 179
           K++PV+V    I G  ++Y   ++ +A  + +GL  FTLAD+Q +PNF+++GV MISGAL
Sbjct: 172 KLIPVLVGSILIQG--KRYGLLDFAAATCMCIGLAWFTLADSQMTPNFNLLGVAMISGAL 229

Query: 180 IMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH--- 236
           + D+ +GN+QE       +    E++F S  +G   L   ML+TG  F  +  C +H   
Sbjct: 230 LCDAAIGNVQEKAMR-EFKAPSSEVVFYSYGLGFVYLFVIMLVTGNFFSGFAFCLEHPVE 288

Query: 237 LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
            + YG L   +++ ++G   VL+L+   GA   A V  + K
Sbjct: 289 TFGYGFLF--SLSGYLGIQFVLALVRSSGAPIAATVTTARK 327

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).

Drosophila melanogaster (taxid: 7227)

>sp|Q29EY2|S35B3_DROPS Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Drosophila pseudoobscura pseudoobscura GN=Papst2 PE=3 SV=2

 Score =  138 bits (348), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 154/279 (55%), Gaps = 19/279 (6%)

Query: 15  SLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVY----LVL 69
            LT   +  QFL+  +G F  Y++ G  +E ++    F  +GW+ T +Q   Y    LV 
Sbjct: 48  DLTHYNQTTQFLLSCAGVFILYILYGYLQELIFTVEGFKPFGWFLTLVQFGYYIGFGLVE 107

Query: 70  IYLQGFTT--KQMMN--------PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKST 119
             L+ + +  + + N        P KTY+ L+A+ +G+ GL+  SL +LNYP Q++FK  
Sbjct: 108 RRLEAYRSGRRSLWNVEPAPRCIPMKTYLVLAALTLGTMGLSNSSLGYLNYPTQVIFKCC 167

Query: 120 KVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGAL 179
           K++PV+V    I G  ++Y   ++ +A  + +GL  FTLAD+Q +PNF+++GV MISGAL
Sbjct: 168 KLIPVLVGSILIQG--KRYGPLDFAAASCMCIGLAWFTLADSQMTPNFNLLGVAMISGAL 225

Query: 180 IMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LY 238
           + D+ +GN+QE     +   +  E++F S  +G   L   ML+TG  F  +  C +H L 
Sbjct: 226 LCDAAIGNVQEKAMKEHKAPSS-EVVFYSYGLGFVYLFVIMLVTGNFFSGFAFCLEHPLQ 284

Query: 239 VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
            +G     +++ ++G   VL+L+   GA   A V  + K
Sbjct: 285 TFGYGFLFSLSGYLGIQFVLALVRSSGAPIAATVTTARK 323

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|Q61LC0|S35B3_CAEBR Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Caenorhabditis briggsae GN=pst-2 PE=3 SV=1

 Score =  134 bits (338), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 152/284 (53%), Gaps = 17/284 (5%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFI 61
           K++ +   L G ++  +PKW QF++ S   F  YL  G  +E ++       +GW  T I
Sbjct: 20  KDDVEPIHLLGFNIARKPKWLQFVLLSGAIFILYLGYGYMQELIFKLPGMKPFGWTLTLI 79

Query: 62  QGFVYLVLIYLQ---GFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKS 118
           Q  +Y    Y +      TK+M+ PW+ Y  ++   + + GL+  S+ +LNYP Q++FK 
Sbjct: 80  QFVIYSGCGYAECAVWHNTKRMI-PWRIYGVIAFFTVATMGLSNASVGYLNYPTQVIFKC 138

Query: 119 TKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGA 178
            K++PV++ G  I G  ++Y   +  +A+L+ +G+I+FTLAD + SPNF   G IMISGA
Sbjct: 139 CKLIPVLIGGILIQG--KRYGWIDISAAILMSLGIIMFTLADNKVSPNFDSRGYIMISGA 196

Query: 179 LIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAW-----NSC 233
           L+ D+ +GN+QE        ++  E++  S  +G   +   ++L+GE+F A      NS 
Sbjct: 197 LLADAVIGNIQEKNMKKYGGSSN-EVVLYSYGIGSVFIFTYVVLSGEIFSAIPFFLENSW 255

Query: 234 SQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
               Y    L+F  +  ++G   VL+ I +FGA     V    K
Sbjct: 256 KTFGY---ALIFSFLG-YLGVNVVLTHIKVFGALVAVTVTTLRK 295

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Caenorhabditis briggsae (taxid: 6238)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	301
225453883	348	PREDICTED: adenosine 3'-phospho 5'-phosp	0.873	0.755	0.931	1e-144
356568332	358	PREDICTED: adenosine 3'-phospho 5'-phosp	0.873	0.734	0.923	1e-143
356532050	358	PREDICTED: adenosine 3'-phospho 5'-phosp	0.873	0.734	0.923	1e-143
449432205	355	PREDICTED: UDP-galactose/UDP-glucose tra	0.873	0.740	0.920	1e-142
356532052	371	PREDICTED: adenosine 3'-phospho 5'-phosp	0.873	0.708	0.880	1e-140
224127530	359	predicted protein [Populus trichocarpa]	0.873	0.732	0.904	1e-140
356568334	371	PREDICTED: adenosine 3'-phospho 5'-phosp	0.873	0.708	0.880	1e-140
225426765	350	PREDICTED: adenosine 3'-phospho 5'-phosp	0.873	0.751	0.912	1e-140
357507121	360	Adenosine 3'-phospho 5'-phosphosulfate t	0.873	0.730	0.897	1e-139
255541442	350	Adenosine 3'-phospho 5'-phosphosulfate t	0.873	0.751	0.893	1e-138

>gi|225453883|ref|XP_002273090.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2 [Vitis vinifera] gi|296089139|emb|CBI38842.3| unnamed protein product [Vitis vinifera]

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 245/263 (93%), Positives = 258/263 (98%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KNEEQ RSLFGISL+DRPKWQQFLICSSGFFFGYLVNG+CEEYVYNRLQFSYGWYFTF+Q
Sbjct: 2   KNEEQARSLFGISLSDRPKWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYLVLIY QGFTTKQM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL
Sbjct: 62  GFVYLVLIYFQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVMVMGAFIPGLRRKYPAHEYVSA+LLVVGLILFTLADA TSPNFS+IGV+M+SGAL+MD
Sbjct: 122 PVMVMGAFIPGLRRKYPAHEYVSAVLLVVGLILFTLADAHTSPNFSVIGVLMVSGALVMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           SFLGNLQEAIFT+NP+TTQMEMLFCSTV+GLP LIPPML TGELFKAWNSCSQHLYVYGV
Sbjct: 182 SFLGNLQEAIFTLNPDTTQMEMLFCSTVIGLPFLIPPMLFTGELFKAWNSCSQHLYVYGV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFG 265
           LVFEAMATFIGQVSVLSLIA+FG
Sbjct: 242 LVFEAMATFIGQVSVLSLIAIFG 264

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568332|ref|XP_003552365.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 1 [Glycine max]

 Score =  513 bits (1320), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 243/263 (92%), Positives = 255/263 (96%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KNEEQ RSLFGISL+DRP+WQQFLICSSGFFFGYLVNG+CEEYVYNRL FSYGWYFTF+Q
Sbjct: 2   KNEEQARSLFGISLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLHFSYGWYFTFVQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYL LIYLQGFT+KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKVL
Sbjct: 62  GFVYLFLIYLQGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVM+MGAFIPGLRRKYP HEY+SA+LLVVGLILFTLADAQTSPNFSMIGVIMISGAL+MD
Sbjct: 122 PVMIMGAFIPGLRRKYPLHEYISAILLVVGLILFTLADAQTSPNFSMIGVIMISGALVMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLP LIPPML TGELFKAW SCSQH YVYGV
Sbjct: 182 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLIPPMLFTGELFKAWTSCSQHPYVYGV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFG 265
           LVFEAMATFIGQVSVLSLIA+FG
Sbjct: 242 LVFEAMATFIGQVSVLSLIAIFG 264

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532050|ref|XP_003534587.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 1 [Glycine max]

 Score =  512 bits (1319), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 243/263 (92%), Positives = 255/263 (96%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KNEEQ RSLFGISL+DRP+WQQFLICSSGFFFGYLVNG+CEEYVYNRL FSYGWYFTF+Q
Sbjct: 2   KNEEQARSLFGISLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLHFSYGWYFTFVQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYL LIYLQGFT+KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKVL
Sbjct: 62  GFVYLCLIYLQGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVM+MGAFIPGLRRKYP HEY+SA+LLVVGLILFTLADAQTSPNFSMIGVIMISGAL+MD
Sbjct: 122 PVMIMGAFIPGLRRKYPLHEYISAILLVVGLILFTLADAQTSPNFSMIGVIMISGALVMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLP LIPPML TGELFKAW SCSQH YVYGV
Sbjct: 182 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLIPPMLFTGELFKAWTSCSQHPYVYGV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFG 265
           LVFEAMATFIGQVSVLSLIA+FG
Sbjct: 242 LVFEAMATFIGQVSVLSLIAIFG 264

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432205|ref|XP_004133890.1| PREDICTED: UDP-galactose/UDP-glucose transporter 4-like [Cucumis sativus]

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 242/263 (92%), Positives = 255/263 (96%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KN+EQ R+LFGISLTDRPKW QFLICSSGFFFGYLVNG+CEEYVYN+LQFSYGWYFTFIQ
Sbjct: 2   KNDEQVRTLFGISLTDRPKWHQFLICSSGFFFGYLVNGICEEYVYNKLQFSYGWYFTFIQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYL LIYLQGFT KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL
Sbjct: 62  GFVYLFLIYLQGFTAKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVM+MGAFIPGLRRKYP HEY+SA+LLVVGLI+FTLADAQTSPNFS++GV+MISGALIMD
Sbjct: 122 PVMIMGAFIPGLRRKYPPHEYISAVLLVVGLIIFTLADAQTSPNFSILGVVMISGALIMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLP LIPPMLLTGELFKAW SCSQH YVYGV
Sbjct: 182 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLIPPMLLTGELFKAWTSCSQHKYVYGV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFG 265
           LVFEAMAT+IGQVSVLSLIALFG
Sbjct: 242 LVFEAMATYIGQVSVLSLIALFG 264

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532052|ref|XP_003534588.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 2 [Glycine max]

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 243/276 (88%), Positives = 255/276 (92%), Gaps = 13/276 (4%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KNEEQ RSLFGISL+DRP+WQQFLICSSGFFFGYLVNG+CEEYVYNRL FSYGWYFTF+Q
Sbjct: 2   KNEEQARSLFGISLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLHFSYGWYFTFVQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYL LIYLQGFT+KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKVL
Sbjct: 62  GFVYLCLIYLQGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVM+MGAFIPGLRRKYP HEY+SA+LLVVGLILFTLADAQTSPNFSMIGVIMISGAL+MD
Sbjct: 122 PVMIMGAFIPGLRRKYPLHEYISAILLVVGLILFTLADAQTSPNFSMIGVIMISGALVMD 181

Query: 183 SFLGNLQEAIFTMNPET-------------TQMEMLFCSTVVGLPMLIPPMLLTGELFKA 229
           SFLGNLQEAIFTMNPET             TQMEMLFCSTVVGLP LIPPML TGELFKA
Sbjct: 182 SFLGNLQEAIFTMNPETTQPYKISNTFSLLTQMEMLFCSTVVGLPFLIPPMLFTGELFKA 241

Query: 230 WNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFG 265
           W SCSQH YVYGVLVFEAMATFIGQVSVLSLIA+FG
Sbjct: 242 WTSCSQHPYVYGVLVFEAMATFIGQVSVLSLIAIFG 277

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127530|ref|XP_002320097.1| predicted protein [Populus trichocarpa] gi|222860870|gb|EEE98412.1| predicted protein [Populus trichocarpa]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 238/263 (90%), Positives = 255/263 (96%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KNEEQ RSLFGISLTDRP+W+QFLICSSGFFFGYLVNG+CEEYVYNRLQFSYGWYFTF+Q
Sbjct: 2   KNEEQERSLFGISLTDRPRWKQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
            FVY++LIYLQGFT KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKVL
Sbjct: 62  SFVYVLLIYLQGFTPKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVMVMGAFIPGLRRKYPAHEY SALLLV GLI+FTLADA+TSPNFS+IGV+MISGALIMD
Sbjct: 122 PVMVMGAFIPGLRRKYPAHEYASALLLVAGLIIFTLADAKTSPNFSIIGVLMISGALIMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           +FLGNLQEAIFT++PETTQMEMLFCS+VVGLP LIPPM+LTGELFKAWNSCSQH YVY V
Sbjct: 182 AFLGNLQEAIFTLSPETTQMEMLFCSSVVGLPFLIPPMVLTGELFKAWNSCSQHPYVYVV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFG 265
           LVFEAMATFIGQVSVLSLIALFG
Sbjct: 242 LVFEAMATFIGQVSVLSLIALFG 264

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568334|ref|XP_003552366.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 2 [Glycine max]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 243/276 (88%), Positives = 255/276 (92%), Gaps = 13/276 (4%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KNEEQ RSLFGISL+DRP+WQQFLICSSGFFFGYLVNG+CEEYVYNRL FSYGWYFTF+Q
Sbjct: 2   KNEEQARSLFGISLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLHFSYGWYFTFVQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYL LIYLQGFT+KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKVL
Sbjct: 62  GFVYLFLIYLQGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVM+MGAFIPGLRRKYP HEY+SA+LLVVGLILFTLADAQTSPNFSMIGVIMISGAL+MD
Sbjct: 122 PVMIMGAFIPGLRRKYPLHEYISAILLVVGLILFTLADAQTSPNFSMIGVIMISGALVMD 181

Query: 183 SFLGNLQEAIFTMNPET-------------TQMEMLFCSTVVGLPMLIPPMLLTGELFKA 229
           SFLGNLQEAIFTMNPET             TQMEMLFCSTVVGLP LIPPML TGELFKA
Sbjct: 182 SFLGNLQEAIFTMNPETTQPYKVSNTFSWLTQMEMLFCSTVVGLPFLIPPMLFTGELFKA 241

Query: 230 WNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFG 265
           W SCSQH YVYGVLVFEAMATFIGQVSVLSLIA+FG
Sbjct: 242 WTSCSQHPYVYGVLVFEAMATFIGQVSVLSLIAIFG 277

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426765|ref|XP_002282676.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2 [Vitis vinifera] gi|297742604|emb|CBI34753.3| unnamed protein product [Vitis vinifera]

 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 240/263 (91%), Positives = 252/263 (95%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           K EEQ RSLFGISL+DRPKWQQFLICSSGFFFGYL+NG+CEEYVYNRL+FSYGWYFTFIQ
Sbjct: 2   KGEEQARSLFGISLSDRPKWQQFLICSSGFFFGYLINGICEEYVYNRLKFSYGWYFTFIQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYL LIYLQGFTTKQM NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL
Sbjct: 62  GFVYLALIYLQGFTTKQMSNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVM+MGAFIPGLRRKYP HEYVSA+LLVVGLILFTLADAQTSPNFS IGV+MISGAL+MD
Sbjct: 122 PVMIMGAFIPGLRRKYPFHEYVSAVLLVVGLILFTLADAQTSPNFSSIGVLMISGALVMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           SFLGNLQEAIFTMNPETTQMEMLFCSTVVG P L+ PM+LTGELFKAWNSC QH YVYGV
Sbjct: 182 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGFPFLLVPMILTGELFKAWNSCLQHPYVYGV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFG 265
           LVFEAMATF+GQVSVLSLIA+FG
Sbjct: 242 LVFEAMATFVGQVSVLSLIAMFG 264

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357507121|ref|XP_003623849.1| Adenosine 3'-phospho 5'-phosphosulfate transporter [Medicago truncatula] gi|124360233|gb|ABN08246.1| Solute carrier family 35 member B3, related [Medicago truncatula] gi|355498864|gb|AES80067.1| Adenosine 3'-phospho 5'-phosphosulfate transporter [Medicago truncatula]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 236/263 (89%), Positives = 252/263 (95%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           K EEQ RSLFGISL+D+P+WQQFLICSSGFFFGYLVNG+CEEYVYNRL FSYGWYFTFIQ
Sbjct: 2   KKEEQGRSLFGISLSDKPRWQQFLICSSGFFFGYLVNGICEEYVYNRLHFSYGWYFTFIQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYL LIYL GFT+KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKVL
Sbjct: 62  GFVYLFLIYLNGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVM+MGAFIPGLRRKYP HEY+SA+LLVVGLILFTLADA TSPNFS++GV+MI+GAL+MD
Sbjct: 122 PVMIMGAFIPGLRRKYPIHEYISAILLVVGLILFTLADAHTSPNFSVVGVVMITGALVMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           SFLGNLQEAIFTMNP+TTQMEMLFCSTVVGLP LIPPML TGELFKAW SCSQH YVYGV
Sbjct: 182 SFLGNLQEAIFTMNPDTTQMEMLFCSTVVGLPFLIPPMLFTGELFKAWTSCSQHPYVYGV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFG 265
           LVFEAMATFIGQVSVLSLIALFG
Sbjct: 242 LVFEAMATFIGQVSVLSLIALFG 264

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541442|ref|XP_002511785.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis] gi|223548965|gb|EEF50454.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis]

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 235/263 (89%), Positives = 253/263 (96%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KNEE+ RSLFGISL+DRP+WQQFLICSSGFFFGYLVNG+CEEYVYNRLQFSYGWYFTF+Q
Sbjct: 2   KNEEKGRSLFGISLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
            FVY+ LIYLQGFT  QM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKVL
Sbjct: 62  IFVYIFLIYLQGFTPAQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVMVMGAFIPGLRR+YP HEYVSALLLVVGLILFTLADA+TSPNF  IGV+MISGALIMD
Sbjct: 122 PVMVMGAFIPGLRRRYPVHEYVSALLLVVGLILFTLADAKTSPNFHTIGVVMISGALIMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           +FLGNLQEAIFT+NPETTQMEMLFCS+VVGLP LIPPM+LTGELF+AWNSCSQH YVYGV
Sbjct: 182 AFLGNLQEAIFTINPETTQMEMLFCSSVVGLPFLIPPMILTGELFRAWNSCSQHPYVYGV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFG 265
           L+FEAMATF+GQVSVLSLIALFG
Sbjct: 242 LIFEAMATFVGQVSVLSLIALFG 264

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	301
TAIR|locus:2195032	349	AT1G12600 "AT1G12600" [Arabido	0.910	0.785	0.806	1.4e-119
ZFIN|ZDB-GENE-060312-46	386	slc35b3 "solute carrier family	0.900	0.702	0.340	3.1e-35
UNIPROTKB|F1P4W7	387	SLC35B3 "Uncharacterized prote	0.873	0.679	0.349	4e-35
UNIPROTKB|E2RJI8	369	SLC35B3 "Uncharacterized prote	0.877	0.715	0.335	1.1e-34
UNIPROTKB|F1RV99	369	SLC35B3 "Uncharacterized prote	0.877	0.715	0.332	2.8e-34
UNIPROTKB|E1BLS0	430	SLC35B3 "Uncharacterized prote	0.877	0.613	0.328	7.4e-34
RGD|1307183	369	Slc35b3 "solute carrier family	0.877	0.715	0.332	7.4e-34
UNIPROTKB|Q9H1N7	401	SLC35B3 "Adenosine 3'-phospho	0.877	0.658	0.324	2e-33
MGI|MGI:1913978	369	Slc35b3 "solute carrier family	0.877	0.715	0.328	2.5e-33
UNIPROTKB|Q17CE7	382	Papst2 "Adenosine 3'-phospho 5	0.903	0.712	0.309	3.7e-32

TAIR|locus:2195032 AT1G12600 "AT1G12600" [Arabidopsis thaliana (taxid:3702)]

 Score = 1177 (419.4 bits), Expect = 1.4e-119, P = 1.4e-119
 Identities = 221/274 (80%), Positives = 240/274 (87%)

Query:     4 NEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQG 63
             +EEQ   LFGI L+D+P+WQQFLICSSGFFFGYLVNG+CEEYVYNRL+FSYGWYFTF QG
Sbjct:     5 SEEQMIKLFGIPLSDKPRWQQFLICSSGFFFGYLVNGICEEYVYNRLKFSYGWYFTFAQG 64

Query:    64 FVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLP 123
              VY+ LIY+ GF TKQM+NPWKTYVKLS VLMGSHGLTKGSLA+LNYPAQ+MFKSTKVLP
Sbjct:    65 LVYIALIYMYGFRTKQMVNPWKTYVKLSGVLMGSHGLTKGSLAYLNYPAQIMFKSTKVLP 124

Query:   124 VMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDS 183
             VMVMGAFIPGLRRKYP HEY               ADA TSPNFS+IGV+MISGALIMD+
Sbjct:   125 VMVMGAFIPGLRRKYPVHEYISAMLLVIGLILFTLADAHTSPNFSIIGVMMISGALIMDA 184

Query:   184 FLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVL 243
             FLGNLQEAIFTMNPETTQMEMLFCSTVVGLP L+ PM+LTGELF AWNSC+QH YVYGVL
Sbjct:   185 FLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLLAPMILTGELFTAWNSCAQHPYVYGVL 244

Query:   244 VFEAMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
             VFEAMATFIGQVSVLSLIALFGAATTAM+  + K
Sbjct:   245 VFEAMATFIGQVSVLSLIALFGAATTAMITTARK 278

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0055085 "transmembrane transport" evidence=IEA

ZFIN|ZDB-GENE-060312-46 slc35b3 "solute carrier family 35, member B3" [Danio rerio (taxid:7955)]

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 95/279 (34%), Positives = 149/279 (53%)

Query:     3 KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFI 61
             K+ E+ R L GI+L       QF IC +G F  YL+ G  +E +++   F  +GWY T +
Sbjct:    45 KSVEELRVL-GINLNSFNTPTQFFICVAGVFLFYLIYGYLQELIFSVEGFKPFGWYLTLV 103

Query:    62 Q-GFVYLV-LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKST 119
             Q GF  L  L+ LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  
Sbjct:   104 QFGFYSLFGLVELQLTQDKRRRIPCKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCC 163

Query:   120 KVLPVMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGAL 179
             K++PVM+ G FI G  ++Y   +                AD++ +PNF++ GV++IS AL
Sbjct:   164 KLIPVMIGGVFIQG--KRYNVADVSAALCMSLGLIWFTLADSKIAPNFNVTGVLLISLAL 221

Query:   180 IMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LY 238
               D+ +GN+QE    ++   +  EM+  S  +G   ++  +L  G L  A + C+QH + 
Sbjct:   222 CADAAIGNVQEKAMKLH-NGSNSEMVLYSYSIGFVYILLGLLSLGGLGPAVSFCAQHPMT 280

Query:   239 VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
              YG     ++  + G   VL+LI LFGA     V    K
Sbjct:   281 TYGYAFLFSLTGYFGISFVLALIKLFGALVAVTVTTGRK 319

GO:0055085 "transmembrane transport" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1P4W7 SLC35B3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 95/272 (34%), Positives = 144/272 (52%)

Query:    11 LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQ-GFVYLV 68
             + GI+L+   K  QF IC SG F  YL+ G  +E +++   F  +GWY T +Q GF Y V
Sbjct:    53 VLGINLSKFNKPAQFFICVSGVFMFYLIYGYLQELIFSVEGFKPFGWYLTLVQFGF-YSV 111

Query:    69 --LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMV 126
               LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVMV
Sbjct:   112 FGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMV 171

Query:   127 MGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDSFLG 186
              G FI G  ++Y   +                AD+  +PNF++ GV++IS AL  D+ +G
Sbjct:   172 GGVFIQG--KRYNIADVSAALCMSLGLIWFTLADSTVAPNFNLTGVVLISLALCADAVIG 229

Query:   187 NLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVF 245
             N+QE    ++   +  EM+  S  +G   ++  +  T  L  A   CSQH +  YG    
Sbjct:   230 NVQEKAMKLH-NGSNSEMVLYSYSIGFLYILLGLTCTSGLSPAVAFCSQHPIQTYGYAFL 288

Query:   246 EAMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
              ++  + G   VL+LI +FGA     V    K
Sbjct:   289 FSLTGYFGISFVLALIKIFGALLAVTVTTGRK 320

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|E2RJI8 SLC35B3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 91/271 (33%), Positives = 143/271 (52%)

Query:    11 LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQF-SYGWYFTFIQGFVYLV- 68
             + GI+L+   K  QF IC +G F  YL+ G  +E +++   F SYGWY T +Q   Y + 
Sbjct:    35 VLGINLSRFNKLTQFFICVAGVFVFYLIYGYLQELIFSMEGFKSYGWYLTLVQFAFYSIF 94

Query:    69 -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
              LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:    95 GLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 154

Query:   128 GAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDSFLGN 187
             G FI G  ++Y   +                AD+  +PNF++ GVI+IS AL  D+ +GN
Sbjct:   155 GVFIQG--KRYNIADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVILISLALCADAVIGN 212

Query:   188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
             +QE    ++   +  EM+  S  +G   ++  +  T  L  A   CS++ +  YG     
Sbjct:   213 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCSKNPIQTYGYAFLF 271

Query:   247 AMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
             ++  + G   VL+LI +FGA     V    K
Sbjct:   272 SLTGYFGISFVLALIKIFGALLAVTVTTGRK 302

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|F1RV99 SLC35B3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 90/271 (33%), Positives = 142/271 (52%)

Query:    11 LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLV- 68
             + GI+L+   K  QF IC +G F  YL+ G  +E +++   F  YGWY T +Q   Y + 
Sbjct:    35 VLGINLSRFNKLTQFFICVAGVFVFYLIYGYLQELIFSMEGFKPYGWYLTLVQFAFYSIF 94

Query:    69 -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
              LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:    95 GLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 154

Query:   128 GAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDSFLGN 187
             G FI G  ++Y   +                AD+  +PNF++ GVI+IS AL  D+ +GN
Sbjct:   155 GVFIQG--KRYNVADVSAALCMSLGLIWFTLADSTVAPNFNLTGVILISLALCADAVIGN 212

Query:   188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
             +QE    ++   +  EM+  S  +G   ++  +  T  L  A   CS++ +  YG     
Sbjct:   213 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCSKNPVRTYGYAFLF 271

Query:   247 AMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
             ++  + G   VL+LI +FGA     V    K
Sbjct:   272 SLTGYFGISFVLALIKIFGALLAVTVTTGRK 302

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|E1BLS0 SLC35B3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 89/271 (32%), Positives = 141/271 (52%)

Query:    11 LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLV- 68
             + GI+L+   K  QF IC +G F  YL+ G  +E +++   F  YGWY T +Q   Y + 
Sbjct:    96 VLGINLSRFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKPYGWYLTLVQFAFYSIF 155

Query:    69 -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
              LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:   156 GLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 215

Query:   128 GAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDSFLGN 187
             G FI G  ++Y   +                AD+  +PNF++ GV++IS AL  D+ +GN
Sbjct:   216 GVFIQG--KRYNVADVSAALCMSLGLIWFTLADSTVAPNFNLTGVVLISLALCADAVIGN 273

Query:   188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
             +QE    ++   +  EM+  S  +G   ++  +  T  L  A   CS+  +  YG     
Sbjct:   274 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCSKDPIRTYGYAFLF 332

Query:   247 AMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
             ++  + G   VL+LI +FGA     V    K
Sbjct:   333 SLTGYFGISFVLALIKIFGALLAVTVTTGRK 363

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

RGD|1307183 Slc35b3 "solute carrier family 35, member B3" [Rattus norvegicus (taxid:10116)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 90/271 (33%), Positives = 143/271 (52%)

Query:    11 LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLV- 68
             + G++L+   K  QFLIC +G F  YL+ G  +E +++   F  YGWY T +Q   Y V 
Sbjct:    35 VLGVNLSRFKKLTQFLICVAGVFVFYLIYGYLQELIFSMEGFKPYGWYLTLVQFAFYSVF 94

Query:    69 -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
              LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:    95 GLIELQLTQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 154

Query:   128 GAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDSFLGN 187
             G FI G  ++Y   +                AD+  +PNF++ GV++IS AL  D+ +GN
Sbjct:   155 GVFIQG--KRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGN 212

Query:   188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
             +QE    ++   +  EM+  S  +G   ++  +  T  L  A   CS++ +  YG     
Sbjct:   213 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLSCTSGLGPALAFCSKNPVRTYGYAFLF 271

Query:   247 AMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
             ++  + G   VL+LI +FGA     V    K
Sbjct:   272 SLTGYFGISFVLALIKIFGALLAVTVTTGRK 302

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|Q9H1N7 SLC35B3 "Adenosine 3'-phospho 5'-phosphosulfate transporter 2" [Homo sapiens (taxid:9606)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 88/271 (32%), Positives = 143/271 (52%)

Query:    11 LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQF-SYGWYFTFIQGFVYLV- 68
             + G++L+   K  QF IC +G F  YL+ G  +E +++   F S GWY T +Q   Y + 
Sbjct:    67 VLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSCGWYLTLVQFAFYSIF 126

Query:    69 -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
              LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:   127 GLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 186

Query:   128 GAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDSFLGN 187
             G FI G  ++Y   +                AD+ T+PNF++ GV++IS AL  D+ +GN
Sbjct:   187 GVFIQG--KRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADAVIGN 244

Query:   188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
             +QE    ++   +  EM+  S  +G   ++  +  T  L  A   C+++ +  YG     
Sbjct:   245 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYAFLF 303

Query:   247 AMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
             ++  + G   VL+LI +FGA     V    K
Sbjct:   304 SLTGYFGISFVLALIKIFGALIAVTVTTGRK 334

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

MGI|MGI:1913978 Slc35b3 "solute carrier family 35, member B3" [Mus musculus (taxid:10090)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 89/271 (32%), Positives = 143/271 (52%)

Query:    11 LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLV- 68
             + G++L+   K  QFLIC +G F  YL+ G  +E +++   F  YGWY T +Q   Y V 
Sbjct:    35 VLGVNLSKFSKLTQFLICVAGVFVFYLIYGYLQELIFSVEGFKPYGWYLTLVQFAFYSVF 94

Query:    69 -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
              LI LQ    ++   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:    95 GLIELQLTQDRRRRIPGKTYMLIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 154

Query:   128 GAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDSFLGN 187
             G FI G  ++Y   +                AD+  +PNF++ GV++IS AL  D+ +GN
Sbjct:   155 GVFIQG--KRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGN 212

Query:   188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
             +QE    ++   +  EM+  S  +G   ++  +  T  L  A   CS++ +  YG     
Sbjct:   213 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLSCTSGLGPAVAFCSKNPVGTYGYAFLF 271

Query:   247 AMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
             ++  + G   VL+LI +FGA     V    K
Sbjct:   272 SLTGYFGISFVLALIKIFGALLAVTVTTGRK 302

GO:0005739 "mitochondrion" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|Q17CE7 Papst2 "Adenosine 3'-phospho 5'-phosphosulfate transporter 2" [Aedes aegypti (taxid:7159)]

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 87/281 (30%), Positives = 148/281 (52%)

Query:     2 NKNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTF 60
             +++ ++ + LF   LT      +FL+C +G F  YL+ G  +E ++    F  YGW+ T 
Sbjct:    32 DEDRKEVKILF-FDLTYYNTTTKFLLCCAGVFVLYLLYGYMQELIFTLDGFKPYGWFLTL 90

Query:    61 IQGFVYLVLIYLQ-GFTTKQMMN--PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFK 117
             +Q   Y V  Y++    +K++    P KTYV L+ + +G+ GL+  SL +LNYP Q++FK
Sbjct:    91 VQFAYYTVFGYVERSLESKRVPRCIPMKTYVLLAFLTLGTMGLSNSSLGYLNYPTQVIFK 150

Query:   118 STKVLPVMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISG 177
               K++PV++    I G  +K+   ++               AD+Q SPNF+  GV++IS 
Sbjct:   151 CCKLVPVLIGSILIQG--KKHGPLDFLAAIAMCLGLTLFTLADSQVSPNFNPFGVLLISL 208

Query:   178 ALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH- 236
             AL+ D+ +GN+QE     + +    E++  S  +G   L   MLLTG LF     C ++ 
Sbjct:   209 ALLCDAAIGNVQEKAMREH-KAPNNEVVIYSYGIGFVYLSVIMLLTGNLFSGITFCMKYP 267

Query:   237 LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHK 277
             +  +G     +++ ++G   VL+L+   GA   A V  + K
Sbjct:   268 VETFGYAFLFSLSGYLGIQIVLTLVRTCGAPLAATVTTARK 308

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=ISS

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q29Q28	UTR2_ARATH	No assigned EC number	0.8702	0.8704	0.7594	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	301
pfam08449	303	pfam08449, UAA, UAA transporter family	3e-66

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score =  209 bits (533), Expect = 3e-66
 Identities = 90/260 (34%), Positives = 140/260 (53%), Gaps = 15/260 (5%)

Query: 25  FLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLVLIYLQGFTT---KQM 80
           FLIC SG F GY  NGV +E +  R   S +G   TF Q     ++  L        K  
Sbjct: 1   FLICISGIFGGYCSNGVLQELIMTREYGSPFGNLLTFAQFLFISLVGLLYLLLFKKLKPR 60

Query: 81  MNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPA 140
             P KTYV + A    S  L   +L +++YP  ++FKS K++PVM++G  I    ++Y +
Sbjct: 61  KIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILI--YGKRYSS 118

Query: 141 HEYVSALLLVVGLILFTLADAQTSPNFS------MIGVIMISGALIMDSFLGNLQEAIFT 194
            +Y+SALL+ +G+I+FTLA A+ S N         +G+ ++ GAL+MD+  GN QE ++ 
Sbjct: 119 LQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVGIALLFGALLMDALTGNTQEKLYK 178

Query: 195 MNPETTQMEMLFCSTVVGLPMLIPPMLLTGE--LFKAWNSCSQHLYVYGVLVFEAMATFI 252
              + +  EM+F S ++ LP  +  +L      LF A + C +H  V   L+  ++  ++
Sbjct: 179 KYGKHS-KEMMFYSHLLSLPFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLTQYV 237

Query: 253 GQVSVLSLIALFGAATTAMV 272
           GQ  V  LI+ FGA T  +V
Sbjct: 238 GQFFVFYLISEFGALTVTLV 257

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	301
KOG1582	367	consensus UDP-galactose transporter related protei	100.0
KOG1581	327	consensus UDP-galactose transporter related protei	100.0
KOG1580	337	consensus UDP-galactose transporter related protei	100.0
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	100.0
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	100.0
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.92
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.92
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.91
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.91
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.89
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.8
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.77
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.75
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.74
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.57
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.46
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.45
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.41
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.22
PRK11689	295	aromatic amino acid exporter; Provisional	99.2
PLN00411	358	nodulin MtN21 family protein; Provisional	99.12
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.1
PRK11272	292	putative DMT superfamily transporter inner membran	99.07
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.02
PRK15430	296	putative chloramphenical resistance permease RarD;	98.97
KOG2765	416	consensus Predicted membrane protein [Function unk	98.87
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.86
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.86
KOG2766	336	consensus Predicted membrane protein [Function unk	98.85
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.48
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.15
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.05
PF13536	113	EmrE: Multidrug resistance efflux transporter	97.97
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.92
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	97.36
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.07
PLN00411	358	nodulin MtN21 family protein; Provisional	96.67
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.55
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	96.23
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.06
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	95.77
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	95.61
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	95.4
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	95.2
PRK11272	292	putative DMT superfamily transporter inner membran	95.07
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	95.01
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	94.88
PRK15430	296	putative chloramphenical resistance permease RarD;	94.81
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	94.7
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	93.96
PRK11689	295	aromatic amino acid exporter; Provisional	93.9
PRK10532	293	threonine and homoserine efflux system; Provisiona	93.83
COG2510	140	Predicted membrane protein [Function unknown]	93.76
PRK09541	110	emrE multidrug efflux protein; Reviewed	93.62
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	93.26
COG2510	140	Predicted membrane protein [Function unknown]	93.09
PRK11431	105	multidrug efflux system protein; Provisional	92.23
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	92.0
COG2076	106	EmrE Membrane transporters of cations and cationic	91.92
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	91.07
PRK10650	109	multidrug efflux system protein MdtI; Provisional	90.54
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	90.31
PF13536	113	EmrE: Multidrug resistance efflux transporter	89.78
COG0697	292	RhaT Permeases of the drug/metabolite transporter	89.12
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	88.88
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	88.17
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	87.16
COG2962	293	RarD Predicted permeases [General function predict	86.26
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	85.65
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	83.03
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	81.38
COG2962	293	RarD Predicted permeases [General function predict	80.15

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=8e-63  Score=433.24  Aligned_cols=289  Identities=47%  Similarity=0.836  Sum_probs=269.7

Q ss_pred             Cccccc--eeEEeeecCCCchhHHHHHHHHHHHHHHhhHHHHhhhhhccCCCC-chhHHHHHHHHHHHHH--HHHhcccC
Q 022197            3 KNEEQT--RSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLVL--IYLQGFTT   77 (301)
Q Consensus         3 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~-~~~~lt~~q~l~~~~~--~~~~~~~~   77 (301)
                      ++||||  +|++|+++++.|+|+||++|.+|+|+.|+.||++||.|++.++|+ ++|.+|+.|++++..+  ++++.+++
T Consensus        20 ~s~e~p~ki~llg~~ls~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~   99 (367)
T KOG1582|consen   20 ISEEQPSKIKLLGFNLSDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQT   99 (367)
T ss_pred             ccccCCcceeEEeeccccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecc
Confidence            467788  559999999999999999999999999999999999999999997 9999999999999654  45678888


Q ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhhee
Q 022197           78 KQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFT  157 (301)
Q Consensus        78 ~~~~~p~~~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~  157 (301)
                      +++.+|||.|..+++....++.++|.|+.|+|||+|+++||||++|||++|.+++|  |||++.+|.++.+++.|+++|+
T Consensus       100 k~r~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqG--kRY~v~d~~aA~lm~lGli~FT  177 (367)
T KOG1582|consen  100 KRRVIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQG--KRYGVHDYIAAMLMSLGLIWFT  177 (367)
T ss_pred             cceecchhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeecc--ccccHHHHHHHHHHHHHHHhhh
Confidence            88999999999999999999999999999999999999999999999999999975  9999999999999999999999


Q ss_pred             ccCCCCCCCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhcc
Q 022197          158 LADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHL  237 (301)
Q Consensus       158 ~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p  237 (301)
                      ++|+..+|+|+..|+.++..++++||+.++.||+.++.++. +..||+||+.-+++|++++.++.+||+.++|.|+.+||
T Consensus       178 LADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~-ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp  256 (367)
T KOG1582|consen  178 LADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPA-SSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHP  256 (367)
T ss_pred             hcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCC-CcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCc
Confidence            99999899999999999999999999999999999998864 46899999999999999999999999999999999999


Q ss_pred             H-HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccc-ccee
Q 022197          238 Y-VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNIL-TCEY  294 (301)
Q Consensus       238 ~-~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~-~~~G  294 (301)
                      . .+.+.++.++++++||.++...++.|||++.++++|.||++|+++     ..++|-+ .|.|
T Consensus       257 ~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~g  320 (367)
T KOG1582|consen  257 VRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSG  320 (367)
T ss_pred             HhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhh
Confidence            6 888999999999999999999999999999999999999999886     5566655 3444

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.2e-57  Score=407.04  Aligned_cols=277  Identities=25%  Similarity=0.377  Sum_probs=254.9

Q ss_pred             chhHHHHHHHHHHHHHHhhHHHHhhhhhcc------CCCCchhHHHHHHHHHHHHHH--HHhccc-CCCCCCchhHHHHH
Q 022197           20 PKWQQFLICSSGFFFGYLVNGVCEEYVYNR------LQFSYGWYFTFIQGFVYLVLI--YLQGFT-TKQMMNPWKTYVKL   90 (301)
Q Consensus        20 ~~~~~~~~~~~gi~~~~~~~g~~qE~i~~~------~~f~~~~~lt~~q~l~~~~~~--~~~~~~-~~~~~~p~~~y~~~   90 (301)
                      ++.+++++|+.||+++|++||++||+|+++      ++|+++.++.++|.++..++.  ++++++ +.+.+.|+++|...
T Consensus        10 ~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~i   89 (327)
T KOG1581|consen   10 NKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLI   89 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHH
Confidence            456799999999999999999999999764      469999999999998887664  344443 35667899999999


Q ss_pred             HHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCC-----C
Q 022197           91 SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTS-----P  165 (301)
Q Consensus        91 s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~-----~  165 (301)
                      ++....+.+|+++||||||||+|++.||||+||||+++.++  +||||+..||++++++++|+.+|++.+.+++     .
T Consensus        90 s~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lv--y~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~  167 (327)
T KOG1581|consen   90 SFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLV--YGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGR  167 (327)
T ss_pred             HHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHH--hcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCC
Confidence            99999999999999999999999999999999999999999  7899999999999999999999999866442     2


Q ss_pred             CcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHH
Q 022197          166 NFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVF  245 (301)
Q Consensus       166 ~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~  245 (301)
                      ++++.|+.++..++++||++++.||++++++ +.++.+||+|+|+++.++....++..|.+.++++|+.+||+++.|+++
T Consensus       168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~-k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l  246 (327)
T KOG1581|consen  168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKY-KVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILL  246 (327)
T ss_pred             CCchHhHHHHHHHHHHHhhHHhHHHHHhccC-CccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHH
Confidence            5779999999999999999999999999965 567899999999999999998888899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEee
Q 022197          246 EAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVN  299 (301)
Q Consensus       246 ~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~  299 (301)
                      +++|+++||.|||.++++|||+|.++++|+||++|+++     ||+++..||.|+.+||
T Consensus       247 ~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVF  305 (327)
T KOG1581|consen  247 YSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVF  305 (327)
T ss_pred             HHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeeh
Confidence            99999999999999999999999999999999999876     9999999999999997

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.8e-59  Score=401.41  Aligned_cols=283  Identities=25%  Similarity=0.383  Sum_probs=245.8

Q ss_pred             ecCCCchhHHHHHHHHHHHHHHhhHHHHhhhhhccC---------CCCchhHHHHHHHHHHHHHHHH-hccc--CCCCCC
Q 022197           15 SLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRL---------QFSYGWYFTFIQGFVYLVLIYL-QGFT--TKQMMN   82 (301)
Q Consensus        15 ~~~~~~~~~~~~~~~~gi~~~~~~~g~~qE~i~~~~---------~f~~~~~lt~~q~l~~~~~~~~-~~~~--~~~~~~   82 (301)
                      +-+-.|.+.++++|++||++||..||+.||+|.++.         +|.+...+.+.||.++.+++-. -..|  .+.++.
T Consensus         4 ~~s~lper~rf~ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t   83 (337)
T KOG1580|consen    4 VRSWLPERGRFLICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNT   83 (337)
T ss_pred             cccccccccceeEEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCC
Confidence            344456678899999999999999999999997532         3444445555555555444321 1222  345678


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCC
Q 022197           83 PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ  162 (301)
Q Consensus        83 p~~~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~  162 (301)
                      |.+.|+.+++.|..+|..+|.|++|+|||+|++.|||||||||++|+++  .+|+|+|++|.++++|++|+++|+|.+.+
T Consensus        84 ~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~--~~KsY~w~kY~cVL~IV~GValFmYK~~K  161 (337)
T KOG1580|consen   84 PTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLF--AHKSYHWRKYCCVLMIVVGVALFMYKENK  161 (337)
T ss_pred             cchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhh--hcccccHHHHHHHHHHHHHHHHhhccccc
Confidence            9999999999999999999999999999999999999999999999999  79999999999999999999999998764


Q ss_pred             C---CCCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHH
Q 022197          163 T---SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYV  239 (301)
Q Consensus       163 ~---~~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~  239 (301)
                      .   +++...+|-+++++|+.+||+++..|||+.+.+.+. ...||+|+|+++...+...++++||+++.+.|.+|||++
T Consensus       162 v~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~-g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~  240 (337)
T KOG1580|consen  162 VGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRT-GTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYV  240 (337)
T ss_pred             cCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccC-chhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHH
Confidence            3   234567899999999999999999999999876543 457999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEeec
Q 022197          240 YGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVNT  300 (301)
Q Consensus       240 ~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~~  300 (301)
                      +.++.+.++++++||.++|.++.+|||||+++++|+||++|++.     +|++++.||+|..+||.
T Consensus       241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~  306 (337)
T KOG1580|consen  241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFS  306 (337)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999764     99999999999998874

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=100.00  E-value=1.4e-52  Score=388.68  Aligned_cols=273  Identities=31%  Similarity=0.509  Sum_probs=247.3

Q ss_pred             HHHHHHHHHHHHhhHHHHhhhhhccCCCC-chhHHHHHHHHHHHHHHHH--hccc-CCCCCCchhHHHHHHHHHHHHHHH
Q 022197           25 FLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLVLIYL--QGFT-TKQMMNPWKTYVKLSAVLMGSHGL  100 (301)
Q Consensus        25 ~~~~~~gi~~~~~~~g~~qE~i~~~~~f~-~~~~lt~~q~l~~~~~~~~--~~~~-~~~~~~p~~~y~~~s~~~~~~~~l  100 (301)
                      +++|++|++++|+.||++||++++++++. +|++++++|++.+.+....  ...+ +++++.|+++|++.++++..++.+
T Consensus         1 ~~~~~~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (303)
T PF08449_consen    1 FLICVAGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVL   80 (303)
T ss_pred             CEeeHHHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHH
Confidence            46899999999999999999999887776 8999999998777665432  2223 556788999999999999999999


Q ss_pred             HHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCc------chHHHHH
Q 022197          101 TKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNF------SMIGVIM  174 (301)
Q Consensus       101 ~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~------~~~G~~l  174 (301)
                      +|+|++|+|+|+|+++||||++|||++++++  +||||+++||++++++++|+++++++|.+++++.      +..|+++
T Consensus        81 ~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~--~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~l  158 (303)
T PF08449_consen   81 SNAALKYISYPTQIVFKSSKPIPVMILGVLI--LGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIIL  158 (303)
T ss_pred             HHHHHHhCChHHHHHHhhhHHHHHHHHHHHh--cCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHH
Confidence            9999999999999999999999999999999  7899999999999999999999999986443221      2349999


Q ss_pred             HHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhh--hccHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 022197          175 ISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLL--TGELFKAWNSCSQHLYVYGVLVFEAMATFI  252 (301)
Q Consensus       175 l~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~--~gel~~~~~f~~~~p~~~~~l~~~~l~~~~  252 (301)
                      +++|+++||+++++|||+++++++ ++.|+|+|+|++++|+.++..+.  +||+.++++++.+||+.+.+++++++++++
T Consensus       159 l~~sl~~~a~~~~~qe~~~~~~~~-~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~  237 (303)
T PF08449_consen  159 LLLSLLLDAFTGVYQEKLFKKYGK-SPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGAL  237 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            999999999999999999998865 58999999999999999888877  899999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEeec
Q 022197          253 GQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVNT  300 (301)
Q Consensus       253 g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~~  300 (301)
                      ||.+++.+++++||++.++++|+||++|+++     ||++++.||+|+++|+.
T Consensus       238 g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~  290 (303)
T PF08449_consen  238 GQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFA  290 (303)
T ss_pred             HHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHH
Confidence            9999999999999999999999999999775     99999999999998863

; GO: 0055085 transmembrane transport

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.4e-44  Score=318.76  Aligned_cols=269  Identities=22%  Similarity=0.333  Sum_probs=235.3

Q ss_pred             HHHHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHH---HHHhcccCCCCCCchhHHHHHHHHHHHHHHH
Q 022197           24 QFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVL---IYLQGFTTKQMMNPWKTYVKLSAVLMGSHGL  100 (301)
Q Consensus        24 ~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~---~~~~~~~~~~~~~p~~~y~~~s~~~~~~~~l  100 (301)
                      +-+...++++++||.+.+..|.+. +++++.++++|++|++ ++.+   ++.+.+...++++|.|.|+....+++..+.+
T Consensus         3 ~a~~ai~~vf~GCcsnvv~lE~L~-~~~pgsgNLITFaqFl-Fia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~   80 (330)
T KOG1583|consen    3 MAAAAISLVFGGCCSNVVFLELLV-RNEPGSGNLITFAQFL-FIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVT   80 (330)
T ss_pred             hHHHHHHHHHHhhhchHHHHHHHH-HhCCCCeeehHHHHHH-HHHHhceeeeccccccCCCCchhhhheehheeeeeeee
Confidence            345678899999999999999997 6778888999999954 5543   2334454556889999999998888999999


Q ss_pred             HHHHhhc-cchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCC---------C-----C
Q 022197          101 TKGSLAF-LNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT---------S-----P  165 (301)
Q Consensus       101 ~n~aL~y-vs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~---------~-----~  165 (301)
                      +|+|++| ||+|.|+++||.+++.+|++|+++  ++|||+.+||.+++++++|++++++.+.++         +     +
T Consensus        81 NN~al~f~I~~PlHiIfRsgsll~nM~~g~il--~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~  158 (330)
T KOG1583|consen   81 NNYALKFNIPMPLHIIFRSGSLLANMILGWIL--LGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSD  158 (330)
T ss_pred             ccceeeecccceEEEEEecCcHHHHHHHHHHh--ccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCccccc
Confidence            9999999 999999999999999999999999  679999999999999999999999975432         0     1


Q ss_pred             C-cchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhc--------
Q 022197          166 N-FSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH--------  236 (301)
Q Consensus       166 ~-~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~--------  236 (301)
                      . .+.+|+.++.++++++|..+.+||+++++|+|+ |.|.|||+|++++|+++   +.-+|+.+++.-+...        
T Consensus       159 ~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh-~~EalFytH~LsLP~Fl---f~~~div~~~~~~~~se~~~~p~~  234 (330)
T KOG1583|consen  159 FFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKH-WKEALFYTHFLSLPLFL---FMGDDIVSHWRLAFKSESYLIPLL  234 (330)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHhccchHH---HhcchHHHHHHHHhcCcceecccc
Confidence            1 235799999999999999999999999999986 89999999999999886   5567888888776555        


Q ss_pred             ----cHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEeec
Q 022197          237 ----LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVNT  300 (301)
Q Consensus       237 ----p~~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~~  300 (301)
                          |..+.+++.++++|+.|.-.+|.+.+++++||++++.|+||++|+++     -|++|+..|+|..+||.
T Consensus       235 g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~  307 (330)
T KOG1583|consen  235 GFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFF  307 (330)
T ss_pred             CccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHH
Confidence                35678899999999999999999999999999999999999999876     89999999999999874

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.92  E-value=9.2e-25  Score=195.95  Aligned_cols=270  Identities=15%  Similarity=0.254  Sum_probs=203.5

Q ss_pred             CchhHHHHHHHHHHHHHHhhHHHHhhhhhc--cCCCCchhHHHHHHHHHHHHHHHH-----hcccCC-CCCCchhHHH--
Q 022197           19 RPKWQQFLICSSGFFFGYLVNGVCEEYVYN--RLQFSYGWYFTFIQGFVYLVLIYL-----QGFTTK-QMMNPWKTYV--   88 (301)
Q Consensus        19 ~~~~~~~~~~~~gi~~~~~~~g~~qE~i~~--~~~f~~~~~lt~~q~l~~~~~~~~-----~~~~~~-~~~~p~~~y~--   88 (301)
                      ++..+.-.+...|+...|...++.....++  +++|++|.+.+.+|..+-..++.+     ++..++ +.+..|+.|+  
T Consensus         7 ~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~   86 (349)
T KOG1443|consen    7 DNQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRR   86 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHH
Confidence            344333333344444555544544444332  456999999999997665444322     222222 3457788887  


Q ss_pred             --HHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCC
Q 022197           89 --KLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPN  166 (301)
Q Consensus        89 --~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~  166 (301)
                        +.+++.+.+++++|+|++|++++.|+|.||+.++++.+++.+++  -+|++|.-.+.+++|.+|++++++.+    ++
T Consensus        87 ~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~--lEk~~w~L~l~v~lI~~Glflft~Ks----Tq  160 (349)
T KOG1443|consen   87 LAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFK--LEKFRWALVLIVLLIAVGLFLFTYKS----TQ  160 (349)
T ss_pred             hhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHH--hHHHHHHHHHHHHHHhhheeEEEecc----cc
Confidence              78999999999999999999999999999999999999999994  69999999999999999999999976    37


Q ss_pred             cchHHHHHHHHHHHHHhhhHHHHHHHHhhCC--CCCHHHHHHHHHHHhHHHHhH-HHhhhccH----HHHHHHHHhcc-H
Q 022197          167 FSMIGVIMISGALIMDSFLGNLQEAIFTMNP--ETTQMEMLFCSTVVGLPMLIP-PMLLTGEL----FKAWNSCSQHL-Y  238 (301)
Q Consensus       167 ~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~--~~~~~e~mfy~~~~~~~~~~~-~~~~~gel----~~~~~f~~~~p-~  238 (301)
                      ++..|+.++.+|.+++|+++.+.+.++++++  +.+|.+++++..++....+++ .+.++|-.    .+.+++  .++ .
T Consensus       161 f~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~--~d~~~  238 (349)
T KOG1443|consen  161 FNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRF--QDTGL  238 (349)
T ss_pred             eeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHh--cCccH
Confidence            8999999999999999999999999998764  457899999999876554444 45567632    122222  233 2


Q ss_pred             HHH---HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEE
Q 022197          239 VYG---VLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYAC  296 (301)
Q Consensus       239 ~~~---~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~  296 (301)
                      ++.   .+.+-+..+++.-.+-|.+.++++.+|.+++|..|+..++++     ++.++..+|.|..
T Consensus       239 ~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~  304 (349)
T KOG1443|consen  239 ILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLA  304 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHH
Confidence            333   344445555555678899999999999999999999999775     7788888898864

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.92  E-value=5.3e-25  Score=202.99  Aligned_cols=266  Identities=16%  Similarity=0.246  Sum_probs=214.4

Q ss_pred             HHHHHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHHHH-Hh--cccCC---CCCCchhHHHHHHHHHHH
Q 022197           23 QQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIY-LQ--GFTTK---QMMNPWKTYVKLSAVLMG   96 (301)
Q Consensus        23 ~~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~~~-~~--~~~~~---~~~~p~~~y~~~s~~~~~   96 (301)
                      ....++.+-.+++-....+...+++++.+|++|..+|.+|..+...... .+  +..+.   +++.++++-+++++.++.
T Consensus        16 ~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~   95 (316)
T KOG1441|consen   16 LRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCI   95 (316)
T ss_pred             HHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHH
Confidence            4556666666777777777788888778999999999998655543322 22  22221   245788889999999999


Q ss_pred             HHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHHHH
Q 022197           97 SHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMIS  176 (301)
Q Consensus        97 ~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~  176 (301)
                      +.+++|.|++|+|+++.|+.|+..|+++.++++++  .+|++++..|+++++++.|++++++.|.    ++++.|+...+
T Consensus        96 ~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~--~~~~~s~~~~lsL~piv~GV~ias~~e~----~fn~~G~i~a~  169 (316)
T KOG1441|consen   96 SHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLL--LGKTYSSMTYLSLLPIVFGVAIASVTEL----SFNLFGFISAM  169 (316)
T ss_pred             HHHhcchhhhccchhHHHHHHhhcchhHHHHHHHH--hCCCCcceEEEEEEEeeeeEEEeeeccc----cccHHHHHHHH
Confidence            99999999999999999999999999999999999  7899999999999999999999999774    78999999999


Q ss_pred             HHHHHHhhhHHHHHHHHhh-CCCCCHHHHHHHHHHHhHHHHh-HHHhh-hccHHHHHHHHHhccH--HHHHHHHHHHHHH
Q 022197          177 GALIMDSFLGNLQEAIFTM-NPETTQMEMLFCSTVVGLPMLI-PPMLL-TGELFKAWNSCSQHLY--VYGVLVFEAMATF  251 (301)
Q Consensus       177 ~sl~~dg~~~~~qe~l~~~-~~~~~~~e~mfy~~~~~~~~~~-~~~~~-~gel~~~~~f~~~~p~--~~~~l~~~~l~~~  251 (301)
                      .+.+..+.+++++++++++ ..+.++++.++|..++++..++ |.... +|+.. . .+ ..++.  -....++++++++
T Consensus       170 ~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~-~~~~~~~~~~~~~~~sv~~f  246 (316)
T KOG1441|consen  170 ISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GF-LTAPWFVTFLILLLNSVLAF  246 (316)
T ss_pred             HHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-ee-eccccchhhHHHHHHHHHHH
Confidence            9999999999999999963 2356789999999999988888 55432 33332 1 11 11121  1334556669999


Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHHhhhh-----cccccccccceeEEE
Q 022197          252 IGQVSVLSLIALFGAATTAMVNPSHKLEAFP-----QFHNVNILTCEYACL  297 (301)
Q Consensus       252 ~g~~~i~~~i~~~galt~svv~t~Rk~~sil-----lg~~~~~~~~~G~~l  297 (301)
                      +.|...|.++.++||+|.++.+..|..+-++     +++++|+.|..|.++
T Consensus       247 ~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~i  297 (316)
T KOG1441|consen  247 LLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAI  297 (316)
T ss_pred             HHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHH
Confidence            9999999999999999999999999966543     388999999998764

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.91  E-value=2.4e-23  Score=188.82  Aligned_cols=254  Identities=15%  Similarity=0.228  Sum_probs=209.9

Q ss_pred             HHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHHHHH-hccc----CCCCCCchhHHHHHHHHHHHHHHHHHHHhhccc
Q 022197           35 GYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYL-QGFT----TKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLN  109 (301)
Q Consensus        35 ~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~~~~-~~~~----~~~~~~p~~~y~~~s~~~~~~~~l~n~aL~yvs  109 (301)
                      +-+.-.+..+.+.++++|+...++.+.|.++.++.... +..+    ++-+....|+|+++++++..+...+..++||+|
T Consensus        23 sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~ln  102 (314)
T KOG1444|consen   23 SSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLN  102 (314)
T ss_pred             HHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccccccccC
Confidence            33444556677778888888888888998877665433 2211    112345667899999999999999999999999


Q ss_pred             hHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHHHHHHHHHHhhhHHHH
Q 022197          110 YPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQ  189 (301)
Q Consensus       110 ~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~q  189 (301)
                      +|+++++|+.+++.|++.+..+  +++|+++..|.++..+.+|.......|.    .++..|+.++..+++..+...++.
T Consensus       103 Vpm~tv~kn~tii~~ai~E~lf--~~~~~~~~v~~Sv~~m~~~s~~~~~~d~----sf~~~gY~w~~~n~~~~a~~~v~~  176 (314)
T KOG1444|consen  103 VPMFTVFKNLTIILTAIGEVLF--FGKRPSNKVWASVFAMIIGSVAAAFTDL----SFNLRGYSWALANCLTTAAFVVYV  176 (314)
T ss_pred             chHHHHHhhchHHHHHHhHHhh--cCcCchhhHHHHHHHHHHHHHhhccccc----eecchhHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999  7899999999999999999998888775    677889999999999999999999


Q ss_pred             HHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHHHHHhhhhH
Q 022197          190 EAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCS---QHLYVYGVLVFEAMATFIGQVSVLSLIALFGA  266 (301)
Q Consensus       190 e~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~---~~p~~~~~l~~~~l~~~~g~~~i~~~i~~~ga  266 (301)
                      ++-.+.. +.+.+++|||+|++++|.+....+.+||+. +..+..   ..+.++..+.++|++++.-.++.++|+...||
T Consensus       177 kk~vd~~-~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SA  254 (314)
T KOG1444|consen  177 KKSVDSA-NLNKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSA  254 (314)
T ss_pred             HHhhccc-cccceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            8887753 346789999999999999988888899988 555532   22456788999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhc-----ccccccccceeEE
Q 022197          267 ATTAMVNPSHKLEAFPQ-----FHNVNILTCEYAC  296 (301)
Q Consensus       267 lt~svv~t~Rk~~sill-----g~~~~~~~~~G~~  296 (301)
                      +|.+++|...|..+.+-     +.+.+..+.+|+.
T Consensus       255 tT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll  289 (314)
T KOG1444|consen  255 TTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLL  289 (314)
T ss_pred             cceeehhhhhhHHHHHHHHhcCCceechhhhHHHH
Confidence            99999997777777442     6678887777653

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.91  E-value=4.4e-22  Score=188.17  Aligned_cols=269  Identities=12%  Similarity=0.144  Sum_probs=205.8

Q ss_pred             hHHHHHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHHH--HHh-cccCCCC----CCchhHHHHHHHHH
Q 022197           22 WQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLI--YLQ-GFTTKQM----MNPWKTYVKLSAVL   94 (301)
Q Consensus        22 ~~~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~~--~~~-~~~~~~~----~~p~~~y~~~s~~~   94 (301)
                      .++....+...|..=..+.+...++++.  +++|+.++..|+++..++.  .+. +.++.++    +..+++.+++++++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            4577777777777777778888888754  7889999999987765432  221 2322121    12345567889988


Q ss_pred             HHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHH
Q 022197           95 MGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIM  174 (301)
Q Consensus        95 ~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~l  174 (301)
                      ......+|.|+++++.++.++.|++.|+.++++++++  ++||++++++++++++++|+++...+|.    ++++.|+++
T Consensus       125 ~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~--l~ek~s~~~~l~l~l~v~Gv~l~~~~~~----~~~~~G~~~  198 (350)
T PTZ00343        125 LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILF--LKQFLNLYAYLSLIPIVGGVALASVKEL----HFTWLAFWC  198 (350)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHH--hCCCccHHHHHHHHHHHHHHHheecccc----hhHHHHHHH
Confidence            7777788999999999999999999999999999999  8999999999999999999999987653    567889999


Q ss_pred             HHHHHHHHhhhHHHHHHHHhhCC----CCCHHHHHHHHHHHhHHHHhHHHh-hhc-cHHHHHHH----HHhcc--HHHHH
Q 022197          175 ISGALIMDSFLGNLQEAIFTMNP----ETTQMEMLFCSTVVGLPMLIPPML-LTG-ELFKAWNS----CSQHL--YVYGV  242 (301)
Q Consensus       175 l~~sl~~dg~~~~~qe~l~~~~~----~~~~~e~mfy~~~~~~~~~~~~~~-~~g-el~~~~~f----~~~~p--~~~~~  242 (301)
                      .++|.++.++++++.+|++++++    +.++.+...|..+++..+++|... .++ +....+.-    ..+.+  .....
T Consensus       199 ~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~  278 (350)
T PTZ00343        199 AMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFK  278 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHH
Confidence            99999999999999999987542    234555666667777777766654 222 11211110    01111  23335


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197          243 LVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV  298 (301)
Q Consensus       243 l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv  298 (301)
                      ++.++++.++-|...|..+++.||+|.++.+++|.+++++.     |+++|+.|++|.+++
T Consensus       279 i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~li  339 (350)
T PTZ00343        279 IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVA  339 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHH
Confidence            66778888888899999999999999999999999998764     999999999998765

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.89  E-value=2.2e-21  Score=179.49  Aligned_cols=264  Identities=16%  Similarity=0.139  Sum_probs=195.3

Q ss_pred             HHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHHHHHh---cccCC--CCCCchhHHHHHHHHHHHHHHH
Q 022197           26 LICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQ---GFTTK--QMMNPWKTYVKLSAVLMGSHGL  100 (301)
Q Consensus        26 ~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~~~~~---~~~~~--~~~~p~~~y~~~s~~~~~~~~l  100 (301)
                      ...+...+..-..+.++++++++  ++++|..+++.|+.+........   +.+++  .++..++..++.+++......+
T Consensus         4 ~~~~~~w~~~~~~~~~~NK~~l~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   81 (302)
T TIGR00817         4 GLLFGLWYFLNVYFNIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVT   81 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            34455566666667777777764  48999999999977665443221   22211  1223455566788888888899


Q ss_pred             HHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHHHHHHHH
Q 022197          101 TKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALI  180 (301)
Q Consensus       101 ~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~~sl~  180 (301)
                      +|.+++|+|.+..++.|+..|+.++++++++  +|||++.++++++++..+|+++...+|    .+++..|..+.+++.+
T Consensus        82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~--~~e~~~~~~~~~l~l~~~Gv~l~~~~~----~~~~~~G~~~~l~a~~  155 (302)
T TIGR00817        82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFF--LGQEFPSTLWLSLLPIVGGVALASDTE----LSFNWAGFLSAMISNI  155 (302)
T ss_pred             HHHHHHhccHHHHHHHHhcchHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHhhhcCCc----ccccHHHHHHHHHHHH
Confidence            9999999999999999999999999999999  889999999999999999998875433    2456789999999999


Q ss_pred             HHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHH-HHHH----hccH-HHHHHHHHH-HHHHHH
Q 022197          181 MDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAW-NSCS----QHLY-VYGVLVFEA-MATFIG  253 (301)
Q Consensus       181 ~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~-~f~~----~~p~-~~~~l~~~~-l~~~~g  253 (301)
                      +-+++..+.+|..+++ +.++.+..+|.+.++...++|.....++..... ++..    ..++ .+...+..+ .+....
T Consensus       156 ~~a~~~v~~k~~~~~~-~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (302)
T TIGR00817       156 TFVSRNIFSKKAMTIK-SLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFY  234 (302)
T ss_pred             HHHHHHHHHHHhhccC-CCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHH
Confidence            9999999999988743 245678899999888877776655444322111 1111    1221 222122222 244455


Q ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197          254 QVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV  298 (301)
Q Consensus       254 ~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv  298 (301)
                      +...|..+++.||.+.++.++++.+++++.     ||++++.||+|.+++
T Consensus       235 ~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~li  284 (302)
T TIGR00817       235 QQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIA  284 (302)
T ss_pred             HHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHH
Confidence            667778999999999999999999999654     999999999998765

specificities overlap.

>TIGR00803 nst UDP-galactose transporter

Probab=99.80  E-value=3.1e-20  Score=164.62  Aligned_cols=182  Identities=15%  Similarity=0.167  Sum_probs=141.2

Q ss_pred             cchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCC-----------------------C
Q 022197          108 LNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT-----------------------S  164 (301)
Q Consensus       108 vs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~-----------------------~  164 (301)
                      +++|.++.+|+++++++|+.++..  .+|||+..||+++.+++.|+....++|.+.                       .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~--~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~   79 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLA--AGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLM   79 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccc--cceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccc
Confidence            689999999999999999999999  689999999999999999999776665310                       1


Q ss_pred             CCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhcc------HHHHHHHHHhccH
Q 022197          165 PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGE------LFKAWNSCSQHLY  238 (301)
Q Consensus       165 ~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~ge------l~~~~~f~~~~p~  238 (301)
                      ....+.|..+++.++++|++.+++||+.+|++      |.++|.+.+++++..+.....++      ......+..++|.
T Consensus        80 ~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (222)
T TIGR00803        80 FGNPVVGLSAVLSALLSSGFAGVYFEKILKDG------DTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPT  153 (222)
T ss_pred             cccHHHHHHHHHHHHHHHhhhHHHHHHcccCC------CCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCch
Confidence            12457899999999999999999999987754      23466666666555433222233      3333333444554


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEeec
Q 022197          239 VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVNT  300 (301)
Q Consensus       239 ~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~~  300 (301)
                      ..   ....++++.++.++..+++++|+.+.++++++||++|.++     ||++++.||.|+.+|+.
T Consensus       154 ~~---~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~  217 (222)
T TIGR00803       154 AV---WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFL  217 (222)
T ss_pred             HH---HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHe
Confidence            32   2334557788999999999999999999999999999764     99999999999988753

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.77  E-value=2.3e-17  Score=154.02  Aligned_cols=210  Identities=17%  Similarity=0.191  Sum_probs=167.7

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197           81 MNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (301)
Q Consensus        81 ~~p~~~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~  160 (301)
                      +.|+++|+.+++++..++.+.+.|++|.|+...+++++...+.+|++++++  +|+||++.|++++++..+|+++...+|
T Consensus        76 ~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~f--L~~ry~~~~~~gv~i~i~Gv~lv~~sD  153 (334)
T PF06027_consen   76 KRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIF--LKRRYSWFHILGVLICIAGVVLVVVSD  153 (334)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHH--HHhhhhHHHHHHHHHHHhhhhheeeec
Confidence            478999999999999999999999999999999999999999999999999  999999999999999999999999988


Q ss_pred             CCC-----CCCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHh-hhccHHHHHHHHH
Q 022197          161 AQT-----SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPML-LTGELFKAWNSCS  234 (301)
Q Consensus       161 ~~~-----~~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~-~~gel~~~~~f~~  234 (301)
                      ..+     +.++...|.++++++..+.|+.+++||++.|++   +..|.+-...+++++...+... ++.+-.+..   .
T Consensus       154 ~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~---~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~---~  227 (334)
T PF06027_consen  154 VLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA---PRVEFLGMLGLFGFIISGIQLAILERSGIESI---H  227 (334)
T ss_pred             ccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC---CHHHHHHHHHHHHHHHHHHHHHheehhhhhcc---C
Confidence            532     124567899999999999999999999999864   3567776667777666554432 333222222   2


Q ss_pred             hccHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197          235 QHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV  298 (301)
Q Consensus       235 ~~p~~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv  298 (301)
                      -+++....++.++++.++-....-..++..||+..++-..+-.+.+++.     |++++++.++|.++|
T Consensus       228 w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lI  296 (334)
T PF06027_consen  228 WTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALI  296 (334)
T ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHH
Confidence            2445556666677776666666677899999998888887788777654     778888877776544

Some of the sequences in this family are annotated as putative membrane proteins.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.75  E-value=4.5e-17  Score=146.56  Aligned_cols=209  Identities=15%  Similarity=0.201  Sum_probs=156.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCC
Q 022197           83 PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ  162 (301)
Q Consensus        83 p~~~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~  162 (301)
                      ...+++.||++|...+.+.+.+++|++.+++|+.+.+|++.|.++++++  +|||.+.+||+++.++++|+++...++..
T Consensus        16 ~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~--L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   16 DTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLL--LKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHH--HHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            3456889999999999999999999999999999999999999999999  99999999999999999999999997653


Q ss_pred             C----C---------CCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhh-ccHHH
Q 022197          163 T----S---------PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLT-GELFK  228 (301)
Q Consensus       163 ~----~---------~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~-gel~~  228 (301)
                      +    +         ......|+.+++++.+++|+.++++||++|+++ .+.+........++.+..++..... ++-..
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~-~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~  172 (244)
T PF04142_consen   94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN-VSLWIQNMQLYLFGILFNLLALLLSDGSAIS  172 (244)
T ss_pred             ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc-hhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence            2    0         112468999999999999999999999999864 4444444455666666655443332 22111


Q ss_pred             HHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhh-----cccccccccceeEEEe
Q 022197          229 AWNSCSQ-HLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFP-----QFHNVNILTCEYACLV  298 (301)
Q Consensus       229 ~~~f~~~-~p~~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sil-----lg~~~~~~~~~G~~lv  298 (301)
                      .-.+++. ++..+..    .+.++.|-+.+-.++|+.|.++=...+.+--++|.+     +|++++....+|..+|
T Consensus       173 ~~g~f~G~~~~~~~~----i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  173 ESGFFHGYSWWVWIV----IFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             cCCchhhcchHHHHH----HHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            1112222 2222332    344566668888899999987755555555544432     3999999999999886

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.74  E-value=1.6e-17  Score=143.58  Aligned_cols=266  Identities=16%  Similarity=0.201  Sum_probs=200.6

Q ss_pred             CCchhHHHHHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHHH-HHhcccC-CCCCCchhHHHHHHHHHH
Q 022197           18 DRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLI-YLQGFTT-KQMMNPWKTYVKLSAVLM   95 (301)
Q Consensus        18 ~~~~~~~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~~-~~~~~~~-~~~~~p~~~y~~~s~~~~   95 (301)
                      ..+..-.+.-|...|...     ...+++.+..+|+-...+.+.|.+++++.. .++..+- +-|....++|++++++..
T Consensus         5 ~s~~~~~lsYc~sSIlmT-----ltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv   79 (309)
T COG5070           5 VSELTASLSYCFSSILMT-----LTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLV   79 (309)
T ss_pred             cccchHHHHHHHHHHHHH-----HhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHH
Confidence            334444566666666544     356677888899999999999988886532 2322111 123456778999999988


Q ss_pred             HHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCC---CcchHHH
Q 022197           96 GSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSP---NFSMIGV  172 (301)
Q Consensus        96 ~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~---~~~~~G~  172 (301)
                      ..+..+..||+|+++|.++++|..++|.+......+  +++|.+..+..+.++|+..-...+.+|.....   ..--.|+
T Consensus        80 ~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~--Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY  157 (309)
T COG5070          80 VMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLF--FGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGY  157 (309)
T ss_pred             HHHHhcccceeeeeeeHHHHhccceeehhHhhHHHH--hcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCce
Confidence            888899999999999999999999999999999999  88999999999999999999999999863211   1122599


Q ss_pred             HHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHh-ccHHHHHHHHHHHHHH
Q 022197          173 IMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQ-HLYVYGVLVFEAMATF  251 (301)
Q Consensus       173 ~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~-~p~~~~~l~~~~l~~~  251 (301)
                      .++..++.-++..-....+..+-... ..+|.|||+|++++|.++...+..+|..+. +.-.+ .++....+.++++|++
T Consensus       158 ~Wm~~NclssaafVL~mrkri~ltNf-~d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d~l~am~ISgl~sv  235 (309)
T COG5070         158 LWMFTNCLSSAAFVLIMRKRIKLTNF-KDFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVDSLMAMFISGLCSV  235 (309)
T ss_pred             EEEehhhHhHHHHHHHHHHhhccccc-chhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChHHHHHHHHHHHHHh
Confidence            99999999888877666555442222 257999999999999998777666665442 11112 3466778889999986


Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHHhhhh-----cccccccccc
Q 022197          252 IGQVSVLSLIALFGAATTAMVNPSHKLEAFP-----QFHNVNILTC  292 (301)
Q Consensus       252 ~g~~~i~~~i~~~galt~svv~t~Rk~~sil-----lg~~~~~~~~  292 (301)
                      .--++.-+|++.+++.|.+++|.+.|..--+     ++.+.+.+..
T Consensus       236 giSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si  281 (309)
T COG5070         236 GISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSI  281 (309)
T ss_pred             hhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHH
Confidence            6668889999999999999999999965422     2666665544

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.57  E-value=4.8e-16  Score=138.13  Aligned_cols=256  Identities=13%  Similarity=0.114  Sum_probs=193.5

Q ss_pred             HHHHhhhhhcc--CCCCchhHHHHHHHHHHHHHHH-Hh----cc----cCCC---CCCchhHHHHHHHHHHHHHHHHHHH
Q 022197           39 NGVCEEYVYNR--LQFSYGWYFTFIQGFVYLVLIY-LQ----GF----TTKQ---MMNPWKTYVKLSAVLMGSHGLTKGS  104 (301)
Q Consensus        39 ~g~~qE~i~~~--~~f~~~~~lt~~q~l~~~~~~~-~~----~~----~~~~---~~~p~~~y~~~s~~~~~~~~l~n~a  104 (301)
                      ..++.+++++.  ..-+.|.+.|..||++...++. +.    +.    .-++   +-...|+..+.++.+...+..+|..
T Consensus        43 ~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlc  122 (347)
T KOG1442|consen   43 LVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLC  122 (347)
T ss_pred             hhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhcccee
Confidence            34555666654  3457899999999998765432 21    11    1111   1234456678899999999999999


Q ss_pred             hhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHHHHHHHHHHhh
Q 022197          105 LAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSF  184 (301)
Q Consensus       105 L~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~~sl~~dg~  184 (301)
                      |+|++++++.+.||.+.+++.+.++++  +|+|-+..-..++.++..|-. ++.+....+...++.|.+.-+.|.++-|+
T Consensus       123 L~yVgVaFYyvgRsLttvFtVlLtyvl--lkqkTs~~~~~~C~lIi~GF~-lGvdqE~~~~~ls~~GvifGVlaSl~vAl  199 (347)
T KOG1442|consen  123 LKYVGVAFYYVGRSLTTVFTVLLTYVL--LKQKTSFFALGCCLLIILGFG-LGVDQEGSTGTLSWIGVIFGVLASLAVAL  199 (347)
T ss_pred             hhhcceEEEEeccchhhhHHHHhHHhh--cccccccccceeehhheehhe-eccccccccCccchhhhHHHHHHHHHHHH
Confidence            999999999999999999999999999  889888888888777777744 22222123346678999999999999999


Q ss_pred             hHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022197          185 LGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQ-HLYVYGVLVFEAMATFIGQVSVLSLIAL  263 (301)
Q Consensus       185 ~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~-~p~~~~~l~~~~l~~~~g~~~i~~~i~~  263 (301)
                      .+++..|..-.-+. ..+..-+|+|..++.+++|.+++.||+.+-+.|... ...+|..+.+++++|+.-++....=+|.
T Consensus       200 naiytkk~l~~v~~-~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~  278 (347)
T KOG1442|consen  200 NAIYTKKVLPPVGD-CIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKV  278 (347)
T ss_pred             HHHhhheecccccC-eehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEe
Confidence            99998865543222 245667899999999999999999999876654222 2246778889999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197          264 FGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV  298 (301)
Q Consensus       264 ~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv  298 (301)
                      +||+|-++-+|.|...-.++     ++.-+..-|-|-.+|
T Consensus       279 TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~v  318 (347)
T KOG1442|consen  279 TSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVV  318 (347)
T ss_pred             cccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEE
Confidence            99999999999998765332     777777777776555

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.46  E-value=4e-13  Score=111.67  Aligned_cols=128  Identities=13%  Similarity=0.179  Sum_probs=106.4

Q ss_pred             HHHHHHHHHHHHhhhHHHHHHHHhhC----CCCCHHHHHHHHHHHhHHHHhHHHhhhccHH--HHHHHHHh-----ccHH
Q 022197          171 GVIMISGALIMDSFLGNLQEAIFTMN----PETTQMEMLFCSTVVGLPMLIPPMLLTGELF--KAWNSCSQ-----HLYV  239 (301)
Q Consensus       171 G~~ll~~sl~~dg~~~~~qe~l~~~~----~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~--~~~~f~~~-----~p~~  239 (301)
                      |+++.+.|.+++|++++++|+++++.    ++.++.++++|+++.+.+.+++..+..++..  +...-..+     .++.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            78999999999999999999999874    4567999999999999999888876655543  11111111     3466


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197          240 YGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV  298 (301)
Q Consensus       240 ~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv  298 (301)
                      +..++.+++.+++.|++.|.+++++||+|.++++++|++++++.     |+++|+.++.|+++.
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~  144 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLA  144 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHH
Confidence            77788899999999999999999999999999999999988664     999999999998653

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.45  E-value=5.2e-12  Score=113.75  Aligned_cols=233  Identities=12%  Similarity=0.076  Sum_probs=165.5

Q ss_pred             CchhHHHHHHHHHHHHHHH-HhcccCCCCCCchhHHHHHHH-HHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhh
Q 022197           53 SYGWYFTFIQGFVYLVLIY-LQGFTTKQMMNPWKTYVKLSA-VLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAF  130 (301)
Q Consensus        53 ~~~~~lt~~q~l~~~~~~~-~~~~~~~~~~~p~~~y~~~s~-~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l  130 (301)
                      ..+....+...+....... ....+  +++.+++.+...+. .......+-+.|++|++.+...+..+..|+.+++++.+
T Consensus        16 ~~~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l   93 (260)
T TIGR00950        16 VPLYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDL   93 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHH
Confidence            3455666666544433221 11112  22224444555543 45667778899999999999999999999999999999


Q ss_pred             ccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHH
Q 022197          131 IPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTV  210 (301)
Q Consensus       131 ~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~  210 (301)
                      +  +|||.+++|+.++.+...|+.+...++.   .+.+..|+.+.+++.++-+..+.++++..++.+. ++.....+...
T Consensus        94 ~--~~e~~~~~~~~gi~i~~~Gv~li~~~~~---~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~-~~~~~~~~~~~  167 (260)
T TIGR00950        94 M--GKERPRKLVLLAAVLGLAGAVLLLSDGN---LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGP-ELLQFTGWVLL  167 (260)
T ss_pred             H--ccCCCcHHHHHHHHHHHHhHHhhccCCc---ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCc-hHHHHHHHHHH
Confidence            9  7899999999999999999988764431   2345789999999999999999999988765432 23333334556


Q ss_pred             HhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHH-HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----c
Q 022197          211 VGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLV-FEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----F  284 (301)
Q Consensus       211 ~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~-~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g  284 (301)
                      ++.+.+.+.....++-..      .++..+..++ ...++..+++.+.+..+++.++-+.++...+...++.++     |
T Consensus       168 ~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~  241 (260)
T TIGR00950       168 LGALLLLPFAWFLGPNPQ------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILG  241 (260)
T ss_pred             HHHHHHHHHHHhcCCCCC------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhC
Confidence            666655555444433211      0222333333 434455788889999999999999999999999988664     9


Q ss_pred             cccccccceeEEEee
Q 022197          285 HNVNILTCEYACLVN  299 (301)
Q Consensus       285 ~~~~~~~~~G~~lv~  299 (301)
                      |++++.+|+|.+++.
T Consensus       242 E~~~~~~~~G~~li~  256 (260)
T TIGR00950       242 ETLSLPQLIGGALII  256 (260)
T ss_pred             CCCCHHHHHHHHHHH
Confidence            999999999987654

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.41  E-value=1.8e-12  Score=119.73  Aligned_cols=209  Identities=17%  Similarity=0.172  Sum_probs=151.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCC-
Q 022197           84 WKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ-  162 (301)
Q Consensus        84 ~~~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~-  162 (301)
                      ..+...++++|...+.+...++.+++-.++++.-..|+..|.++.+++  ++||.+++||.+.+++.+|+++..++..+ 
T Consensus        92 ~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~--L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~  169 (345)
T KOG2234|consen   92 TLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLI--LRRKLSRLQWMALVLLFAGVALVQLPSLSP  169 (345)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHH--HhhhhhHHHHHHHHHHHHHHHHHhccCCCC
Confidence            344667899999999999999999999999999999999999999999  99999999999999999999999954321 


Q ss_pred             --C----CCCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhc-cHHHHHHHHHh
Q 022197          163 --T----SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTG-ELFKAWNSCSQ  235 (301)
Q Consensus       163 --~----~~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~g-el~~~~~f~~~  235 (301)
                        +    ...+.+.|+..++.+++++|+.++|-||++|+.+ .+-+-.......++.++.+..++.++ |-...-.|++.
T Consensus       170 ~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~-~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G  248 (345)
T KOG2234|consen  170 TGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSN-VSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYG  248 (345)
T ss_pred             CCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccc
Confidence              1    1245678999999999999999999999999754 44333333555666666665554432 21112334455


Q ss_pred             ccH-HHHHHHHHHHHHHHHHHHHHHHHhhhhHHH----HHHHHHHHHHhhhhc-ccccccccceeEEEee
Q 022197          236 HLY-VYGVLVFEAMATFIGQVSVLSLIALFGAAT----TAMVNPSHKLEAFPQ-FHNVNILTCEYACLVN  299 (301)
Q Consensus       236 ~p~-~~~~l~~~~l~~~~g~~~i~~~i~~~galt----~svv~t~Rk~~sill-g~~~~~~~~~G~~lv~  299 (301)
                      +.. .|..++.++    +|-+.+-.++|+-+...    .++...+--+.|+.+ ++++|....+|+.+|.
T Consensus       249 ~s~~vw~vVl~~a----~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi  314 (345)
T KOG2234|consen  249 YSSIVWLVVLLNA----VGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVI  314 (345)
T ss_pred             ccHHHHHHHHHHh----ccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHH
Confidence            443 344444544    44466666666666544    233333344555444 8999998888887765

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.22  E-value=6.2e-09  Score=96.31  Aligned_cols=258  Identities=12%  Similarity=0.141  Sum_probs=160.5

Q ss_pred             HHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHHHHHhcccCCCCCCchhHHHHHHHH-HHHHHHHHHHHhhc-cc
Q 022197           32 FFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAV-LMGSHGLTKGSLAF-LN  109 (301)
Q Consensus        32 i~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~~~~~~~~~~~~~~p~~~y~~~s~~-~~~~~~l~n~aL~y-vs  109 (301)
                      ....+.......+...+  + -.|..+++.-++..........+++   +.+++.....+.. ......+...+++| ++
T Consensus        12 ~~~~Wg~~~~~~k~~~~--~-~~p~~~~~~R~~~a~~~l~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   85 (299)
T PRK11453         12 VVVVWGLNFVVIKVGLH--N-MPPLMLAGLRFMLVAFPAIFFVARP---KVPLNLLLGYGLTISFGQFAFLFCAINFGMP   85 (299)
T ss_pred             HHHHHhhhHHHHHHHHh--c-CCHHHHHHHHHHHHHHHHHHHhcCC---CCchHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            34444444444443331  2 3467777777554332221111221   2233433333432 22333456778888 78


Q ss_pred             hHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHHHHHHHHHHhhhHHHH
Q 022197          110 YPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQ  189 (301)
Q Consensus       110 ~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~q  189 (301)
                      -..-.++-++.|+.++++++++  +|||.+.++++++++..+|+.+...++.++ .+.+..|..+.+++.++-+....++
T Consensus        86 a~~a~~l~~~~pi~~~ll~~~~--l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~-~~~~~~G~~l~l~aal~~a~~~v~~  162 (299)
T PRK11453         86 AGLASLVLQAQAFFTIVLGAFT--FGERLQGKQLAGIALAIFGVLVLIEDSLNG-QHVAMLGFMLTLAAAFSWACGNIFN  162 (299)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHH--hcCcCcHHHHHHHHHHHHhHHHhccccCCC-cchhHHHHHHHHHHHHHHHHHHHHH
Confidence            8788888899999999999999  899999999999999999998876543221 2334579999999999999999999


Q ss_pred             HHHHhhCCCCCHHHHHHHHHHHh-HHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHH-HHHHHHHHHHHHHHhhhhHH
Q 022197          190 EAIFTMNPETTQMEMLFCSTVVG-LPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA-MATFIGQVSVLSLIALFGAA  267 (301)
Q Consensus       190 e~l~~~~~~~~~~e~mfy~~~~~-~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~-l~~~~g~~~i~~~i~~~gal  267 (301)
                      +|..++++........++...++ .|........+++......+..-++..+..++..+ +++.++...-+..+++.++-
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~  242 (299)
T PRK11453        163 KKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETW  242 (299)
T ss_pred             HHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence            99865432222223334444433 33332222223322111111112333344343333 44455566667788999999


Q ss_pred             HHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197          268 TTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV  298 (301)
Q Consensus       268 t~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv  298 (301)
                      +.+.+..+--+++.+.     ||+++..+|+|.+++
T Consensus       243 ~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI  278 (299)
T PRK11453        243 RVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLI  278 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence            9999998888877553     999999999998765

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.20  E-value=2.4e-09  Score=98.96  Aligned_cols=233  Identities=11%  Similarity=-0.083  Sum_probs=153.3

Q ss_pred             chhHHHHHHHHHHHHHHHHhcccCCCCCCchhHHHHHHHHHHHHHHHHHHHhhcc----chHHHHHHhhccchhhhhhhh
Q 022197           54 YGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL----NYPAQLMFKSTKVLPVMVMGA  129 (301)
Q Consensus        54 ~~~~lt~~q~l~~~~~~~~~~~~~~~~~~p~~~y~~~s~~~~~~~~l~n~aL~yv----s~p~~~v~Ks~k~i~vml~~~  129 (301)
                      .|..+.+.-+.....+...-..+++.++.+++....-++.......+.+.+++|.    +-..-.+.-+..|+.++++++
T Consensus        31 ~P~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~  110 (295)
T PRK11689         31 GPVGGAAMIYSVSGLLLLLTVGFPRLRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAV  110 (295)
T ss_pred             ChHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHH
Confidence            4566666664444333221111222222333333333444555566677777663    444446778889999999999


Q ss_pred             hccccccccCcchhhHHhHHHHHhhheeccCCCC-------CCCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHH
Q 022197          130 FIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT-------SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQM  202 (301)
Q Consensus       130 l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~-------~~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~  202 (301)
                      ++  +|||.++++++++++-.+|+.+...++...       +..++..|..+.+.+.++-|..+++.+|..+++   ++.
T Consensus       111 ~~--~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~---~~~  185 (295)
T PRK11689        111 LF--NGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK---NGI  185 (295)
T ss_pred             HH--hcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC---Cch
Confidence            99  789999999999999999998877554211       012345799999999999999999999986543   233


Q ss_pred             HHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhh
Q 022197          203 EMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFP  282 (301)
Q Consensus       203 e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sil  282 (301)
                      ...+.  ..+. .+.+....+++...     .-+++.+..++..++.+.+++.+-+..+++.+|...++...+--+++++
T Consensus       186 ~~~~~--~~~~-~l~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i  257 (295)
T PRK11689        186 TLFFI--LTAL-ALWIKYFLSPQPAM-----VFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAA  257 (295)
T ss_pred             hHHHH--HHHH-HHHHHHHHhcCccc-----cCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHH
Confidence            32221  1122 22221122222111     1133445555566677788899999999999999999999999998866


Q ss_pred             c-----ccccccccceeEEEee
Q 022197          283 Q-----FHNVNILTCEYACLVN  299 (301)
Q Consensus       283 l-----g~~~~~~~~~G~~lv~  299 (301)
                      +     ||.+++.+|+|.+++.
T Consensus       258 ~~~~~lgE~~~~~~~iG~~lI~  279 (295)
T PRK11689        258 LAALLLSTPLSFSFWQGVAMVT  279 (295)
T ss_pred             HHHHHhCCCCcHHHHHHHHHHH
Confidence            4     9999999999987754

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.12  E-value=8.6e-09  Score=97.90  Aligned_cols=270  Identities=12%  Similarity=0.033  Sum_probs=166.6

Q ss_pred             HHHHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHH-HHH---HHhcccCCCCCCchhH---HHHHHHHHHH
Q 022197           24 QFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYL-VLI---YLQGFTTKQMMNPWKT---YVKLSAVLMG   96 (301)
Q Consensus        24 ~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~-~~~---~~~~~~~~~~~~p~~~---y~~~s~~~~~   96 (301)
                      +.-..-..+..+|..+..+-...+ +.+.+. ..+.+.=+.... ++.   ..+.++++.++.++++   +...+++-..
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~-~~G~~~-~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~   90 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVAT-SKGLNI-YPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSM   90 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHH-HCCCCc-cHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHH
Confidence            344444556667766666666555 333322 123333323322 221   1221111112223444   3344444333


Q ss_pred             HHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccc----cccccCcchhhHHhHHHHHhhheeccCCC----------
Q 022197           97 SHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPG----LRRKYPAHEYVSALLLVVGLILFTLADAQ----------  162 (301)
Q Consensus        97 ~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~g----l~kry~~~~~~~v~~i~~Gv~lf~~~~~~----------  162 (301)
                      ...+.+.+++|+|-..-.++-+..|+.+++++.++.-    ++||.+.++++++++-.+|+.+....+..          
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~  170 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY  170 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence            4457899999999999999999999999999999810    17999999999999999998865432110          


Q ss_pred             ----------CCCCc-chHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHH-HHhHHHHhHHHhhhccHHHHH
Q 022197          163 ----------TSPNF-SMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCST-VVGLPMLIPPMLLTGELFKAW  230 (301)
Q Consensus       163 ----------~~~~~-~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~-~~~~~~~~~~~~~~gel~~~~  230 (301)
                                ...+. .+.|..+++.|.++=|+..+.|+|..++++.  +....++.. ..+++...+....+++-...+
T Consensus       171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~--~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~  248 (358)
T PLN00411        171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPA--AFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW  248 (358)
T ss_pred             ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc--HhHHHHHHHHHHHHHHHHHHHHHccCCcccc
Confidence                      00112 3569999999999999999999999887642  333333333 334444444433333211111


Q ss_pred             HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEee
Q 022197          231 NSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVN  299 (301)
Q Consensus       231 ~f~~~~p~~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~  299 (301)
                      . ..-++..+. ++..++...++..+-++.+++.||...++...+--++++++     ||++++.+++|.+++.
T Consensus       249 ~-~~~~~~~~~-i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl  320 (358)
T PLN00411        249 I-IHFDITLIT-IVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILIT  320 (358)
T ss_pred             e-eccchHHHH-HHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence            0 001122222 22223334456677788999999999999999999888654     9999999999987653

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.10  E-value=8.5e-09  Score=92.60  Aligned_cols=210  Identities=13%  Similarity=0.157  Sum_probs=157.8

Q ss_pred             chhH--HHHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197           83 PWKT--YVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (301)
Q Consensus        83 p~~~--y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~  160 (301)
                      |++.  +++++++....+.+-|.+|.+-+-+-+||.|.+-+|+|-+++.-+  ++++...+||+++..++.|+++..+.|
T Consensus        83 pf~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~--Ln~ti~~~qWl~i~fv~lGlviVg~~d  160 (372)
T KOG3912|consen   83 PFNPVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMF--LNRTITGRQWLGILFVSLGLVIVGSLD  160 (372)
T ss_pred             CCCcceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHH--HhcccchhhHHHHHHHHhhhheeeeee
Confidence            5544  567999999999999999999999999999999999999999999  999999999999999999999999876


Q ss_pred             CC--CC----CCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHH--------HhHHHHhHHHh-----
Q 022197          161 AQ--TS----PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTV--------VGLPMLIPPML-----  221 (301)
Q Consensus       161 ~~--~~----~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~--------~~~~~~~~~~~-----  221 (301)
                      .-  +.    .+.-..|..+++.+.+.-|++-+++||.+++++ .+|.+..=|-..        ++.|......-     
T Consensus       161 ~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~n-V~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~  239 (372)
T KOG3912|consen  161 VHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSN-VAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSC  239 (372)
T ss_pred             cccccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhcc-CCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcC
Confidence            41  11    133467999999999999999999999999874 345544433333        33333221110     


Q ss_pred             -hhc---cHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhh----hhccc-ccccccc
Q 022197          222 -LTG---ELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEA----FPQFH-NVNILTC  292 (301)
Q Consensus       222 -~~g---el~~~~~f~~~~p~~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~s----illg~-~~~~~~~  292 (301)
                       ..|   |..+++.-+.+.|.....+..+.++-+.-|+.-..++|+-||.|=.+.-.+|..+-    +..|+ .+..+|.
T Consensus       240 ~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqi  319 (372)
T KOG3912|consen  240 NPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQI  319 (372)
T ss_pred             CCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHH
Confidence             112   45566777788887665555555555666777788999999999999999998553    44443 4555665


Q ss_pred             eeE
Q 022197          293 EYA  295 (301)
Q Consensus       293 ~G~  295 (301)
                      .|.
T Consensus       320 lGF  322 (372)
T KOG3912|consen  320 LGF  322 (372)
T ss_pred             HHH
Confidence            553

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.07  E-value=3.9e-08  Score=90.68  Aligned_cols=259  Identities=11%  Similarity=0.030  Sum_probs=165.3

Q ss_pred             HHHHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHH--HHHhcccCC-CCCCchhHHHHHHHHH-HHHHH
Q 022197           24 QFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVL--IYLQGFTTK-QMMNPWKTYVKLSAVL-MGSHG   99 (301)
Q Consensus        24 ~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~--~~~~~~~~~-~~~~p~~~y~~~s~~~-~~~~~   99 (301)
                      .+..+...+...+.+.+..-....   +.-.|..+++..++.....  ......+.+ +++..++.....+.+. .....
T Consensus         8 ~~~~~~~~~~~iWg~~~~~~K~~~---~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   84 (292)
T PRK11272          8 PLFGALFALYIIWGSTYLVIRIGV---ESWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNG   84 (292)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHh---ccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            344455444555555555433322   1235677777775544322  222111111 1122333344455443 34556


Q ss_pred             HHHHHh-hccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHHHHHH
Q 022197          100 LTKGSL-AFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGA  178 (301)
Q Consensus       100 l~n~aL-~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~~s  178 (301)
                      +-+.+. ++++...-.+.-+..|+.+++++.+   +|||.+++++.++++-.+|+.+...++.   .+.+..|..+.+++
T Consensus        85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~---~~e~~~~~~~~~~~la~~Gv~ll~~~~~---~~~~~~G~l~~l~a  158 (292)
T PRK11272         85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL---FGIRTRKLEWLGIAIGLAGIVLLNSGGN---LSGNPWGAILILIA  158 (292)
T ss_pred             HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH---hcccCchhHHHHHHHHHHhHHHHhcCcc---cccchHHHHHHHHH
Confidence            778888 9999999999999999999999975   4799999999999999999988754321   13456799999999


Q ss_pred             HHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHH-HHHHHHHHHH
Q 022197          179 LIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA-MATFIGQVSV  257 (301)
Q Consensus       179 l~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~-l~~~~g~~~i  257 (301)
                      .++-|..+..++|..+++   + .....+...++.+.+.+.....++....    ..+++.+..+...+ +++.++....
T Consensus       159 ~~~~a~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~l~i~~s~~~~~l~  230 (292)
T PRK11272        159 SASWAFGSVWSSRLPLPV---G-MMAGAAEMLAAGVVLLIASLLSGERLTA----LPTLSGFLALGYLAVFGSIIAISAY  230 (292)
T ss_pred             HHHHHHHHHHHHhcCCCc---c-hHHHHHHHHHHHHHHHHHHHHcCCcccc----cCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999988864321   2 2233344444444443333333321110    01223333333333 3456777888


Q ss_pred             HHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEee
Q 022197          258 LSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVN  299 (301)
Q Consensus       258 ~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~  299 (301)
                      +..+++.++-+.++...+.-+++.+.     ||++++.+|+|.+++.
T Consensus       231 ~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi  277 (292)
T PRK11272        231 MYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIV  277 (292)
T ss_pred             HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence            89999999999999999999888654     9999999999987653

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.02  E-value=8.7e-08  Score=86.66  Aligned_cols=195  Identities=13%  Similarity=0.093  Sum_probs=138.4

Q ss_pred             HHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhh-hccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcc
Q 022197           90 LSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGA-FIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS  168 (301)
Q Consensus        90 ~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~-l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~  168 (301)
                      ..+.......+-+.+++|++.+..++..++.|+.+.+++. ++  ++||.+++++.+++....|+.+....+.....+ .
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~-~  152 (292)
T COG0697          76 ALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLL--LGERLSLLQILGILLALAGVLLILLGGGGGGIL-S  152 (292)
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH--ccCCCcHHHHHHHHHHHHhHHheecCCCcchhH-H
Confidence            3455666677888899999999999999999999999996 66  589999999999999999999998876532111 4


Q ss_pred             hHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHH-HHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHH
Q 022197          169 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLF-CSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA  247 (301)
Q Consensus       169 ~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mf-y~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~  247 (301)
                      ..|..+.+++.++.|+....++++. +.   ++....+ +... ........... .+..     .......+..+...+
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~~---~~~~~~~~~~~~-~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~g  221 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-RL---GPVTLALLLQLL-LALLLLLLFFL-SGFG-----APILSRAWLLLLYLG  221 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-CC---ChHHHHHHHHHH-HHHHHHHHHHh-cccc-----ccCCHHHHHHHHHHH
Confidence            6899999999999999999999887 32   2333333 2211 11111111011 1100     001112233333334


Q ss_pred             HHHH-HHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197          248 MATF-IGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV  298 (301)
Q Consensus       248 l~~~-~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv  298 (301)
                      +.+. +++.+.+...++.++...+....+..+.+++.     ||+++..+|+|.+++
T Consensus       222 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li  278 (292)
T COG0697         222 VFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALV  278 (292)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence            4333 68899999999999999999888888777653     999999999997554

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.97  E-value=6.6e-08  Score=89.39  Aligned_cols=191  Identities=11%  Similarity=0.066  Sum_probs=133.8

Q ss_pred             HHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchH
Q 022197           91 SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMI  170 (301)
Q Consensus        91 s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~  170 (301)
                      +........+.++|++|+|...-.+.-.+.|+.++++++++  +|||.++++++++++-..|+++....+.    +..  
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~--l~E~~~~~~~~g~~l~~~Gv~li~~~~~----~~~--  151 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIF--LGERFRRMQWLAVILAICGVLVQLWTFG----SLP--  151 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH--hcCCCcHHHHHHHHHHHHHHHHHHHHcC----Ccc--
Confidence            45566678899999999999999999999999999999999  8999999999999999999987653221    111  


Q ss_pred             HHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHH-HHHHHHHHHH
Q 022197          171 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYV-YGVLVFEAMA  249 (301)
Q Consensus       171 G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~-~~~l~~~~l~  249 (301)
                        .+.+++.++-|+...+++|..++. ..+......+..+++.+...+.  ..... .   ....+|.. +..+...++.
T Consensus       152 --~~~l~aa~~~a~~~i~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~---~~~~~~~~~~~~~~~~g~~  222 (296)
T PRK15430        152 --IIALGLAFSFAFYGLVRKKIAVEA-QTGMLIETMWLLPVAAIYLFAI--ADSST-S---HMGQNPMSLNLLLIAAGIV  222 (296)
T ss_pred             --HHHHHHHHHHHHHHHHHHhcCCCC-chhHHHHHHHHHHHHHHHHHHH--ccCCc-c---cccCCcHHHHHHHHHHHHH
Confidence              346667788888888877754321 1111222223333333222111  11111 0   01122321 2334444556


Q ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197          250 TFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV  298 (301)
Q Consensus       250 ~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv  298 (301)
                      +.+++.+.+..+++.||-..+....+.-.++++.     ||.+++.||+|.+++
T Consensus       223 t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI  276 (296)
T PRK15430        223 TTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFI  276 (296)
T ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence            7789999999999999999999999999888654     999999999998766

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=98.87  E-value=2.4e-09  Score=99.53  Aligned_cols=205  Identities=11%  Similarity=0.149  Sum_probs=145.1

Q ss_pred             HHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCC----CCC
Q 022197           91 SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT----SPN  166 (301)
Q Consensus        91 s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~----~~~  166 (301)
                      ..+-+.+....|.||+|-++...++.-|.+=.+|..++.++  ..+|+++.|.+++++-.+|+++.+.+|++.    .+.
T Consensus       166 c~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if--~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~  243 (416)
T KOG2765|consen  166 CPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIF--PVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPAS  243 (416)
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHc--CcchhhHHHHHHHHHhhccEEEEEeccccccccCCcc
Confidence            44567788899999999999999999999999999999999  469999999999999999999999998732    234


Q ss_pred             cchHHHHHHHHHHHHHhhhHHHHHHHHhhCC-CCCHHHHHH-HHHHHhHHHHhHHHhhhccHH-HHHHHHHhccHHHHHH
Q 022197          167 FSMIGVIMISGALIMDSFLGNLQEAIFTMNP-ETTQMEMLF-CSTVVGLPMLIPPMLLTGELF-KAWNSCSQHLYVYGVL  243 (301)
Q Consensus       167 ~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~-~~~~~e~mf-y~~~~~~~~~~~~~~~~gel~-~~~~f~~~~p~~~~~l  243 (301)
                      ....|-++.+++.++.|++.++-.|-..+++ +.+ +.++| |..++.+.++.|.+++-.-+. +.++ +.+.+.+...+
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvd-i~lffGfvGLfnllllwP~l~iL~~~~~e~F~-lP~~~q~~~vv  321 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVD-IQLFFGFVGLFNLLLLWPPLIILDFFGEERFE-LPSSTQFSLVV  321 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhccccccccc-HHHHHHHHHHHHHHHHhHHHHHHHHhccCccc-CCCCceeEeee
Confidence            5689999999999999999998776655553 443 55665 677888877776654322111 1110 01111222223


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhh-----cccccccccceeEEEee
Q 022197          244 VFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFP-----QFHNVNILTCEYACLVN  299 (301)
Q Consensus       244 ~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sil-----lg~~~~~~~~~G~~lv~  299 (301)
                      +.+++..++.-++=-.-.-.++||+.++-.++.-=++++     .|++.|+.+++|...|+
T Consensus       322 ~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~If  382 (416)
T KOG2765|consen  322 FNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIF  382 (416)
T ss_pred             HhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence            333333344444444555567788777777665544433     39999999998876543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.86  E-value=5e-08  Score=89.43  Aligned_cols=197  Identities=11%  Similarity=0.008  Sum_probs=131.2

Q ss_pred             HHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchH
Q 022197           91 SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMI  170 (301)
Q Consensus        91 s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~  170 (301)
                      +........+-+.+++|.+...-..+-...|+.+.++++++  +|||.++++++++.+...|+.+....+.+   +.+..
T Consensus        70 ~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~--~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~---~~~~~  144 (281)
T TIGR03340        70 AVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLT--LGETLSPLAWLGILIITLGLLVLGLSRFA---QHRRK  144 (281)
T ss_pred             HHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHhccccc---ccchh
Confidence            33456667788999999999999999999999999999999  88999999999999999999877654321   23457


Q ss_pred             HHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHH---HHHh-HHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHH
Q 022197          171 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCS---TVVG-LPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFE  246 (301)
Q Consensus       171 G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~---~~~~-~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~  246 (301)
                      |..+.+++.++-+......++..++.++.  .....+.   .... .|+.... ...++..  .  ....+..+..+...
T Consensus       145 g~~~~l~aal~~a~~~i~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~--~~~~~~~~~~~~~~  217 (281)
T TIGR03340       145 AYAWALAAALGTAIYSLSDKAAALGVPAF--YSALGYLGIGFLAMGWPFLLLY-LKRHGRS--M--FPYARQILPSATLG  217 (281)
T ss_pred             HHHHHHHHHHHHHHhhhhccccccchhcc--cccHHHHHHHHHHHHHHHHHHH-HHHhccc--h--hhhHHHHHHHHHHH
Confidence            88888888888888887655543322111  1122221   1111 2322211 1111110  0  01111223344555


Q ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhh-----cccccccccceeEEEee
Q 022197          247 AMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFP-----QFHNVNILTCEYACLVN  299 (301)
Q Consensus       247 ~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sil-----lg~~~~~~~~~G~~lv~  299 (301)
                      .+++.+++.+.+..+++.++-..+....+--+++++     +||+++..+|+|.+++.
T Consensus       218 ~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil  275 (281)
T TIGR03340       218 GLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIV  275 (281)
T ss_pred             HHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence            667778888888999999986666655555555543     39999999999987653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.86  E-value=5.3e-07  Score=83.24  Aligned_cols=260  Identities=10%  Similarity=0.018  Sum_probs=155.7

Q ss_pred             CCCchhHHHHHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHHHH--HhcccCCCCCCchhHHHHHHHHH
Q 022197           17 TDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIY--LQGFTTKQMMNPWKTYVKLSAVL   94 (301)
Q Consensus        17 ~~~~~~~~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~~~--~~~~~~~~~~~p~~~y~~~s~~~   94 (301)
                      .+.|++.-....+.+....- ..+...+...+.  . .|..+.+..++.......  .+..+.+.++..++.....+.+.
T Consensus         6 ~~~~~~~~~~~~~la~~~~~-~~~~~~K~~~~~--~-~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~   81 (293)
T PRK10532          6 RKLPVWLPILLLLIAMASIQ-SGASLAKSLFPL--V-GAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSL   81 (293)
T ss_pred             cccccchHHHHHHHHHHHHH-hhHHHHHHHHHH--c-CHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHH
Confidence            34444444444444444333 334444444322  2 345577777555443221  11111111122233344556666


Q ss_pred             HHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHH
Q 022197           95 MGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIM  174 (301)
Q Consensus        95 ~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~l  174 (301)
                      .....+.+++++|+|.....+.-.+.|+.+++++      +||....++  +.+...|+.+....+.+ ..+.+..|..+
T Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~------~~~~~~~~~--~~i~~~Gv~li~~~~~~-~~~~~~~G~ll  152 (293)
T PRK10532         82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS------SRRPVDFVW--VVLAVLGLWFLLPLGQD-VSHVDLTGAAL  152 (293)
T ss_pred             HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh------cCChHHHHH--HHHHHHHHheeeecCCC-cccCChHHHHH
Confidence            6677788899999999999899999999888665      244444444  44556787765432211 12345689999


Q ss_pred             HHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHH-HHHHHHHHHH
Q 022197          175 ISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVL-VFEAMATFIG  253 (301)
Q Consensus       175 l~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l-~~~~l~~~~g  253 (301)
                      .+.+.++-|......+|..++++   +... .+...++...+.+.....++..      ..++..+..+ .+-.+++.++
T Consensus       153 ~l~aa~~~a~~~v~~r~~~~~~~---~~~~-~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        153 ALGAGACWAIYILSGQRAGAEHG---PATV-AIGSLIAALIFVPIGALQAGEA------LWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCC---chHH-HHHHHHHHHHHHHHHHHccCcc------cCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999988865542   3333 3444444444433333322100      0122333222 2333444555


Q ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEee
Q 022197          254 QVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVN  299 (301)
Q Consensus       254 ~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~  299 (301)
                      ....+..+++.+|-..++...+--+++.+.     ||++++.||+|.+++.
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl  273 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAII  273 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence            667789999999999999999999888654     9999999999987753

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.85  E-value=1.7e-10  Score=102.12  Aligned_cols=208  Identities=13%  Similarity=0.177  Sum_probs=153.1

Q ss_pred             cccCCCCCCchhHHHHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHh
Q 022197           74 GFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGL  153 (301)
Q Consensus        74 ~~~~~~~~~p~~~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv  153 (301)
                      .+|.+.-+..||.|..+++...-++.+--.|.+|-|....+++.|-..+.+++.+|++  ++.||.+.|+..|....+|+
T Consensus        68 ~fR~~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~f--LktrYrlmki~gV~iCi~Gv  145 (336)
T KOG2766|consen   68 LFRRKYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFF--LKTRYRLMKISGVVICIVGV  145 (336)
T ss_pred             HhhhHHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHH--HHHHHhhheeeeEEeEecce
Confidence            3444444578899999998888887777789999999999999999999999999999  99999999999999999999


Q ss_pred             hheeccCCCC----CCCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHH
Q 022197          154 ILFTLADAQT----SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKA  229 (301)
Q Consensus       154 ~lf~~~~~~~----~~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~  229 (301)
                      ++...+|.-+    ..++...|-+++++..-+.|+.++.||.+.|+-   +..|.|-...+++.+...+-.+.+..-...
T Consensus       146 vmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~---d~~elm~~lgLfGaIIsaIQ~i~~~~~~~t  222 (336)
T KOG2766|consen  146 VMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA---DRVELMGFLGLFGAIISAIQFIFERHHVST  222 (336)
T ss_pred             EEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHhcC---cHHHHHHHHHHHHHHHHHHHHhhhccceee
Confidence            9998887521    134556799999999999999999999999853   467888666666554443222221111111


Q ss_pred             HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc---ccccccc
Q 022197          230 WNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ---FHNVNIL  290 (301)
Q Consensus       230 ~~f~~~~p~~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill---g~~~~~~  290 (301)
                      ++   .+.++...+ .+.++-++.-...=.+++..||...++-..+.++-+++.   |.++..+
T Consensus       223 l~---w~~~i~~yl-~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i~~FgYhv~wL  282 (336)
T KOG2766|consen  223 LH---WDSAIFLYL-RFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLIRTFGYHVDWL  282 (336)
T ss_pred             Ee---ehHHHHHHH-HHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHHHHHhcchhhh
Confidence            11   112233333 356666666666667889999988888877888888664   7776544

>TIGR00688 rarD rarD protein

Probab=98.48  E-value=4.5e-05  Score=68.80  Aligned_cols=177  Identities=9%  Similarity=0.018  Sum_probs=123.4

Q ss_pred             HHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcc
Q 022197           89 KLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS  168 (301)
Q Consensus        89 ~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~  168 (301)
                      ..+........+-++|++|++...-.+.-.+.|+.+++++.++  +|||.++++++++++-..|+++...++.    +..
T Consensus        75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~--l~Ek~~~~~~l~~~~~~~Gv~li~~~~~----~~~  148 (256)
T TIGR00688        75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVF--LKERISRFQFIAVIIATLGVISNIVLKG----SLP  148 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHcC----Cch
Confidence            3455567777899999999999999999999999999999999  8999999999999999999987644321    111


Q ss_pred             hHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhcc-HHHHHHHHHH
Q 022197          169 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHL-YVYGVLVFEA  247 (301)
Q Consensus       169 ~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p-~~~~~l~~~~  247 (301)
                          .+.+++.++-+.....++|..+++    ..+.... +....|...+..+..+... . .  ..++ ..+..++..+
T Consensus       149 ----~~~l~aa~~~a~~~i~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~-~-~--~~~~~~~~~~l~~~g  215 (256)
T TIGR00688       149 ----WEALVLAFSFTAYGLIRKALKNTD----LAGFCLE-TLSLMPVAIYYLLQTDFAT-V-Q--QTNPFPIWLLLVLAG  215 (256)
T ss_pred             ----HHHHHHHHHHHHHHHHHhhcCCCC----cchHHHH-HHHHHHHHHHHHHHhccCc-c-c--ccCchhHHHHHHHHH
Confidence                245677888888888887764321    2222222 2333333332211111110 0 0  0122 2345555556


Q ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhcc
Q 022197          248 MATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQF  284 (301)
Q Consensus       248 l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sillg  284 (301)
                      +.+.+++.+.+.-.++.+|-+.+....+--++++++|
T Consensus       216 ~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~  252 (256)
T TIGR00688       216 LITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCV  252 (256)
T ss_pred             HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHH
Confidence            6778899999999999999999999999888876653

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.15  E-value=0.00035  Score=64.55  Aligned_cols=190  Identities=11%  Similarity=0.064  Sum_probs=128.2

Q ss_pred             HHHHHHHHHHHHHhhccchHHHHHHhh-ccchhhhhhhhhccccccccCcch----hhHHhHHHHHhhheeccCCCCCC-
Q 022197           92 AVLMGSHGLTKGSLAFLNYPAQLMFKS-TKVLPVMVMGAFIPGLRRKYPAHE----YVSALLLVVGLILFTLADAQTSP-  165 (301)
Q Consensus        92 ~~~~~~~~l~n~aL~yvs~p~~~v~Ks-~k~i~vml~~~l~~gl~kry~~~~----~~~v~~i~~Gv~lf~~~~~~~~~-  165 (301)
                      ........+...|.+|+++++-..+-+ ..++.+.+.+.++  +|||.+.++    +++++++..|+++....+.++.. 
T Consensus        67 ~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~--f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~  144 (290)
T TIGR00776        67 AFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIV--FGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGI  144 (290)
T ss_pred             HHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHH--hhhccchHHHHHHHHHHHHHHHhHheEEecccccccc
Confidence            345666678889999999999877777 7777888999999  889999999    99999999999988776533211 


Q ss_pred             ---CcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHH---HHH-hHHHHhHHHhhhccHHHHHHHHHhccH
Q 022197          166 ---NFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCS---TVV-GLPMLIPPMLLTGELFKAWNSCSQHLY  238 (301)
Q Consensus       166 ---~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~---~~~-~~~~~~~~~~~~gel~~~~~f~~~~p~  238 (301)
                         .+...|+.+.++|.++-+.....-++.  ++   ++.+..+..   -++ +..+..+.   ...  +.+    ..+.
T Consensus       145 ~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~---~~~~~~~~~~~g~~~~~~~~~~~~---~~~--~~~----~~~~  210 (290)
T TIGR00776       145 KSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV---DGLSVLLPQAIGMVIGGIIFNLGH---ILA--KPL----KKYA  210 (290)
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC---CcceehhHHHHHHHHHHHHHHHHH---hcc--cch----HHHH
Confidence               223679999999999999988887754  22   344443222   111 22222111   000  111    1112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHhhhhc-----ccccccccc----eeEEEe
Q 022197          239 VYGVLVFEAMATFIGQVSVLSLIA-LFGAATTAMVNPSHKLEAFPQ-----FHNVNILTC----EYACLV  298 (301)
Q Consensus       239 ~~~~l~~~~l~~~~g~~~i~~~i~-~~galt~svv~t~Rk~~sill-----g~~~~~~~~----~G~~lv  298 (301)
                      .+..++ .++.-.+++.+.+.-.+ +-++-+.++..+.--+.+.+.     +++.++.|+    +|.+++
T Consensus       211 ~~~~~~-~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lI  279 (290)
T TIGR00776       211 ILLNIL-PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILI  279 (290)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHH
Confidence            223333 45555666666666667 888888888888887777553     999999999    887654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.05  E-value=1.8e-06  Score=77.44  Aligned_cols=206  Identities=13%  Similarity=0.150  Sum_probs=137.0

Q ss_pred             chhHHHHH-HHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheecc--
Q 022197           83 PWKTYVKL-SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA--  159 (301)
Q Consensus        83 p~~~y~~~-s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~--  159 (301)
                      +.|+|+.+ +++-+.++.+.++|++|+|.+=.+++--++|++|.++++++  +|++|+..+-+...+-..|+++..-.  
T Consensus        95 g~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~--LkE~~t~~eaL~s~itl~GVVLIvRPpF  172 (346)
T KOG4510|consen   95 GKRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAF--LKEPFTKFEALGSLITLLGVVLIVRPPF  172 (346)
T ss_pred             CcEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHH--HcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence            33445433 45556677899999999999999999999999999999999  99999999999999999999886653  


Q ss_pred             ---CCCC---C--CCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHH
Q 022197          160 ---DAQT---S--PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWN  231 (301)
Q Consensus       160 ---~~~~---~--~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~  231 (301)
                         |..+   +  .+.+.-|-...+.+.+.-+-..+.-.++-|+-   +..-.+-|-..+++...++.+..-|++.  +.
T Consensus       173 lFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~---h~~msvsyf~~i~lV~s~I~~~~ig~~~--lP  247 (346)
T KOG4510|consen  173 LFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA---HAIMSVSYFSLITLVVSLIGCASIGAVQ--LP  247 (346)
T ss_pred             ccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccc---cEEEEehHHHHHHHHHHHHHHhhcccee--cC
Confidence               2211   1  13455677777777777666666655555431   1222355666777766665543334321  11


Q ss_pred             HHHhccHHHHHHHHHHHHHHHHHHHHHHHH--hhhhHHHHHHHHHHHHHhh----hh-cccccccccceeEEEeec
Q 022197          232 SCSQHLYVYGVLVFEAMATFIGQVSVLSLI--ALFGAATTAMVNPSHKLEA----FP-QFHNVNILTCEYACLVNT  300 (301)
Q Consensus       232 f~~~~p~~~~~l~~~~l~~~~g~~~i~~~i--~~~galt~svv~t~Rk~~s----il-lg~~~~~~~~~G~~lv~~  300 (301)
                      ...++.   ..+.-.++.|+.||+..-+-+  .+-|+..  +.+...-++.    ++ +||-.|...|.|++.|..
T Consensus       248 ~cgkdr---~l~~~lGvfgfigQIllTm~lQiErAGpva--im~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvs  318 (346)
T KOG4510|consen  248 HCGKDR---WLFVNLGVFGFIGQILLTMGLQIERAGPVA--IMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVS  318 (346)
T ss_pred             ccccce---EEEEEehhhhhHHHHHHHHHhhhhccCCee--hhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeeh
Confidence            111111   123344888999998776544  4666654  3334444443    33 399999999999998864

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=97.97  E-value=1.9e-05  Score=62.57  Aligned_cols=78  Identities=14%  Similarity=0.252  Sum_probs=65.8

Q ss_pred             CchhHHHHHHHHHH-HHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197           82 NPWKTYVKLSAVLM-GSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (301)
Q Consensus        82 ~p~~~y~~~s~~~~-~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~  160 (301)
                      .|+......+.+.. .+..+..+|++|.+ +...+..+..|+.++++++++  +|||.+.+++++++++.+|+++..++|
T Consensus        32 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~--~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   32 KPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF--FKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            34443334455443 77889999999999 688899999999999999999  899999999999999999999999887


Q ss_pred             CC
Q 022197          161 AQ  162 (301)
Q Consensus       161 ~~  162 (301)
                      .+
T Consensus       109 ~~  110 (113)
T PF13536_consen  109 LT  110 (113)
T ss_pred             cc
Confidence            64

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.92  E-value=4.2e-05  Score=60.22  Aligned_cols=117  Identities=13%  Similarity=0.201  Sum_probs=81.7

Q ss_pred             HhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHH-HH--HhcccC--CCCCCchhHHHHHHHH-HHHHHHHHHHHhhccc
Q 022197           36 YLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVL-IY--LQGFTT--KQMMNPWKTYVKLSAV-LMGSHGLTKGSLAFLN  109 (301)
Q Consensus        36 ~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~-~~--~~~~~~--~~~~~p~~~y~~~s~~-~~~~~~l~n~aL~yvs  109 (301)
                      +..+.+.+++..++   -.+...++.+++..... ..  ....++  ..+...+......+.. ...+..+.+.++++++
T Consensus         3 ~a~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~   79 (126)
T PF00892_consen    3 WAIYSVFSKKLLKK---ISPLSITFWRFLIAGILLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS   79 (126)
T ss_pred             eeeHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence            44566777777644   34556667665554421 11  111111  1111122223344444 4777889999999999


Q ss_pred             hHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhhee
Q 022197          110 YPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFT  157 (301)
Q Consensus       110 ~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~  157 (301)
                      .+...++....|+.++++++++  ++||++++++++++++..|+.+..
T Consensus        80 ~~~~~~~~~~~pv~~~i~~~~~--~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   80 ASIVSILQYLSPVFAAILGWLF--LGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999  789999999999999999998753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=97.36  E-value=0.0029  Score=54.76  Aligned_cols=101  Identities=16%  Similarity=0.261  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcch
Q 022197           90 LSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSM  169 (301)
Q Consensus        90 ~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~  169 (301)
                      .++....+..+-..||+-++-+...-.-+|.-.+|.++++++  ++.|+...+++++++-..|+++..|.|...  ...+
T Consensus        59 F~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IV--L~D~~~~~kIlaailAI~GiVmiay~DN~~--a~e~  134 (290)
T KOG4314|consen   59 FSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIV--LGDRFMGFKILAAILAIGGIVMIAYADNEH--ADEI  134 (290)
T ss_pred             eEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHH--hccchhhhhHHHHHHHhCcEEEEEeccchh--hhhh
Confidence            344555666777789999999999999999999999999999  899999999999999999999999988532  3468


Q ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHh
Q 022197          170 IGVIMISGALIMDSFLGNLQEAIFT  194 (301)
Q Consensus       170 ~G~~ll~~sl~~dg~~~~~qe~l~~  194 (301)
                      .|+...+.|.++.+++-+.-++...
T Consensus       135 iGi~~AV~SA~~aAlYKV~FK~~iG  159 (290)
T KOG4314|consen  135 IGIACAVGSAFMAALYKVLFKMFIG  159 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999888776654

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.07  E-value=0.011  Score=48.59  Aligned_cols=67  Identities=9%  Similarity=0.135  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheec
Q 022197           90 LSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTL  158 (301)
Q Consensus        90 ~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~  158 (301)
                      .++.....+..+...+++.|.-++.+....|.+.+.++++++  ++++.+..++.+..+...|..+.+|
T Consensus        87 ~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~--f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   87 SGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIF--FGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhh--cCCcCCHHHHHHHHHHHHHHheeeC
Confidence            345555667788999999999999999999999999999999  8899999999999999999987764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=96.67  E-value=0.019  Score=54.72  Aligned_cols=65  Identities=17%  Similarity=0.174  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCC
Q 022197           95 MGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADA  161 (301)
Q Consensus        95 ~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~  161 (301)
                      ..+-.+.|+++++++...--++-...|++.+++++++  ++|+.++.+++..+++..|+.+...++.
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~--LgE~lt~~~~iG~~LIl~Gv~l~~~~~~  331 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIF--LNDSLYLGCLIGGILITLGFYAVMWGKA  331 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHHHHHhhhh
Confidence            3455679999999999999999999999999999999  8999999999999999999999887654

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=96.55  E-value=0.022  Score=44.97  Aligned_cols=64  Identities=11%  Similarity=0.055  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhhee
Q 022197           92 AVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFT  157 (301)
Q Consensus        92 ~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~  157 (301)
                      .++..+..+-..+++.+|.+.--..-+..++.+++.++++  ++||.+++|++.+.++.+|+++.+
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~--f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKL--WHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHh
Confidence            5577788889999999999999999999999999999999  899999999999999999998754

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=96.23  E-value=0.089  Score=46.98  Aligned_cols=58  Identities=14%  Similarity=0.217  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHh
Q 022197           94 LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGL  153 (301)
Q Consensus        94 ~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv  153 (301)
                      ...+..+.++++++++.....++....|+..+++++++  ++|+.+..+++++.++..|+
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~--~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLI--LGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHhc
Confidence            45566789999999999999999999999999999999  88999999999999999886

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.06  E-value=0.052  Score=50.26  Aligned_cols=126  Identities=12%  Similarity=0.166  Sum_probs=80.8

Q ss_pred             HHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHH---HHH--hc-ccCC-----CCCCchhHHHHHHHHHHHHHHHHH
Q 022197           34 FGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVL---IYL--QG-FTTK-----QMMNPWKTYVKLSAVLMGSHGLTK  102 (301)
Q Consensus        34 ~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~---~~~--~~-~~~~-----~~~~p~~~y~~~s~~~~~~~~l~n  102 (301)
                      .+-...+..||+++++++.+....+-..+.+.....   ...  .+ .++.     +++..+...+..+++......+-+
T Consensus       164 ~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~  243 (303)
T PF08449_consen  164 LLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIF  243 (303)
T ss_pred             HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            444557778999997766655444444443222111   111  11 1110     111112222233444444445556


Q ss_pred             HHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCC
Q 022197          103 GSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADA  161 (301)
Q Consensus       103 ~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~  161 (301)
                      ...+..+-.+..+....+-+.+++++.++  ++++.++.+|+++.++..|..+-.+.+.
T Consensus       244 ~~~~~~~al~~t~v~t~Rk~~sillS~~~--f~~~~~~~~~~G~~lv~~g~~~~~~~~~  300 (303)
T PF08449_consen  244 YLIKKFSALTTTIVTTLRKFLSILLSVII--FGHPLSPLQWIGIVLVFAGIFLYSYAKK  300 (303)
T ss_pred             HHHHhcCchhhhhHHHHHHHHHHHHHHHh--cCCcCChHHHHHHHHhHHHHHHHHHhhc
Confidence            66788888899999999999999999999  7899999999999999999998887654

; GO: 0055085 transmembrane transport

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=95.77  E-value=0.084  Score=49.09  Aligned_cols=66  Identities=17%  Similarity=0.236  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197           93 VLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (301)
Q Consensus        93 ~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~  160 (301)
                      .+..+..++-.|+.+.|.+..+=+-+..++...+++..+  ++||.+++++.++.++..|+++.....
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~--l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFF--LGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHH--hcccchHhHHhhHHHHHhhheeeEEeC
Confidence            345666788899999999999999999999999999999  899999999999999999988766543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=95.61  E-value=0.1  Score=48.03  Aligned_cols=61  Identities=13%  Similarity=0.167  Sum_probs=55.8

Q ss_pred             HHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCC
Q 022197           99 GLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADA  161 (301)
Q Consensus        99 ~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~  161 (301)
                      .+.+.++++++-.+..+.-..+|+.++++++++  ++|+.+..+++...++..|+.+.+..+.
T Consensus       236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~--lge~lt~~~~~G~~lil~Gv~l~~~~k~  296 (302)
T TIGR00817       236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILF--FGTKISPQQVFGTGIAIAGVFLYSRVKA  296 (302)
T ss_pred             HHHHHHHccCCchHHHHHhhhhhhheeeeehhh--cCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence            456689999999999999999999999999999  8899999999999999999998887654

specificities overlap.

>TIGR00688 rarD rarD protein

Probab=95.40  E-value=0.2  Score=44.93  Aligned_cols=124  Identities=6%  Similarity=-0.016  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHh-cc-HHHHHHHHHH
Q 022197          170 IGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQ-HL-YVYGVLVFEA  247 (301)
Q Consensus       170 ~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~-~p-~~~~~l~~~~  247 (301)
                      .|+.+++++.++=|..+...+. ..+   .++.|+.++=.+++.+.+.+.....++..+..+-.++ ++ +....+...+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~---~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   77 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKP---LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCG   77 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hcc---CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHH
Confidence            3889999999999999988765 322   4689999999888877766554344443221111111 11 2223345556


Q ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEE
Q 022197          248 MATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACL  297 (301)
Q Consensus       248 l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~l  297 (301)
                      +....++.+.+.-+++.++-+.+++..+--+++.++     +|+++..+|.|+++
T Consensus        78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~  132 (256)
T TIGR00688        78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVII  132 (256)
T ss_pred             HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence            666777888889999999888888888888777554     99999999988654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=95.20  E-value=0.078  Score=42.55  Aligned_cols=74  Identities=8%  Similarity=0.143  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccchHHHHHH-hhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCC
Q 022197           86 TYVKLSAVLMGSHGLTKGSLAFLNYPAQLMF-KSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADA  161 (301)
Q Consensus        86 ~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~-Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~  161 (301)
                      .+...-.++..+..+=..|+|++|.++---. .....+-+.+.++++  ++++.++.+++.+.++..|++.....+.
T Consensus        32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~--f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLL--FDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            3455566777888888899999988875444 678999999999999  8999999999999999999998877653

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=95.07  E-value=0.31  Score=44.75  Aligned_cols=64  Identities=11%  Similarity=0.100  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197           95 MGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (301)
Q Consensus        95 ~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~  160 (301)
                      ..+..+-++++++++.+...++-...|+..++.++++  ++|+.+..++++..++..|+.+....+
T Consensus       224 ~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~--l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        224 IIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGL--GGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH--cCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            4456688999999999999999999999999999999  889999999999999999999876644

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=95.01  E-value=0.097  Score=42.55  Aligned_cols=69  Identities=13%  Similarity=0.101  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhh--ccccccccCcchhhHHhHHHHHhhheeccCC
Q 022197           91 SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAF--IPGLRRKYPAHEYVSALLLVVGLILFTLADA  161 (301)
Q Consensus        91 s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l--~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~  161 (301)
                      -.++..+..+-+.+++.++.+.---+-+..++.+++.++.  +  ++|+.++.|++.+.++.+|+.+...++.
T Consensus        55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~--~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPW--FNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            3457778889999999988888777777777777777774  6  6899999999999999999999876543

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=94.88  E-value=0.036  Score=43.16  Aligned_cols=108  Identities=9%  Similarity=0.038  Sum_probs=72.5

Q ss_pred             hhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHH-HHHHHHHHHHHHHH
Q 022197          183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA-MATFIGQVSVLSLI  261 (301)
Q Consensus       183 g~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~-l~~~~g~~~i~~~i  261 (301)
                      |.....+++..++   .++.+..++....+.+ .++.....+...    ....+++.+..++..+ ++..+++.+.+...
T Consensus         4 a~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~   75 (126)
T PF00892_consen    4 AIYSVFSKKLLKK---ISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFYAL   75 (126)
T ss_pred             eeHHHHHHHHhcc---CCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence            5566677777765   3577888888887776 443333322211    1111223333333334 44678889999999


Q ss_pred             hhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197          262 ALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV  298 (301)
Q Consensus       262 ~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv  298 (301)
                      ++.++-..++...+.-+++.+.     +++++..+|+|++++
T Consensus        76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~  117 (126)
T PF00892_consen   76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILI  117 (126)
T ss_pred             HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            9999999999999988888654     999999999997654

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=94.81  E-value=0.35  Score=44.55  Aligned_cols=126  Identities=9%  Similarity=-0.076  Sum_probs=87.8

Q ss_pred             chHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHH
Q 022197          168 SMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA  247 (301)
Q Consensus       168 ~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~  247 (301)
                      ...|+.+++++.++=|........ ..   ..++.|..++-..++.+.+.+.....++..+.... .+++.........+
T Consensus         6 ~~~g~~~~l~a~~~wg~~~~~~k~-~~---~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   80 (296)
T PRK15430          6 TRQGVLLALAAYFIWGIAPAYFKL-IY---YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL-IQTPQKIFMLAVSA   80 (296)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHH-hc---CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HcCHHHHHHHHHHH
Confidence            457999999999999999988843 32   24688999999888877666554444443221111 12333222233444


Q ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197          248 MATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV  298 (301)
Q Consensus       248 l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv  298 (301)
                      +.....+.+.+.-+++.++-..+++..+.-+++.++     +++++..+|+|+++.
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~  136 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILA  136 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence            555566788888999999999999988888877654     999999999987654

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=94.70  E-value=1.1  Score=40.51  Aligned_cols=191  Identities=14%  Similarity=0.050  Sum_probs=116.7

Q ss_pred             HHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcc
Q 022197           89 KLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS  168 (301)
Q Consensus        89 ~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~  168 (301)
                      .-+......+.+=+.|++-+|.-+.+.+.-..|+-+.+++      .||.  ++.+-+.+-..|+.+..- +.++..+-|
T Consensus        76 ~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~------sRr~--~d~vwvaLAvlGi~lL~p-~~~~~~~lD  146 (292)
T COG5006          76 AYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS------SRRL--RDFVWVALAVLGIWLLLP-LGQSVWSLD  146 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh------ccch--hhHHHHHHHHHHHHhhee-ccCCcCcCC
Confidence            3455555556677889999999999999999998887654      3544  455556666677775543 222334668


Q ss_pred             hHHHHHHHHHHHHHhhhHHHHHHHHh-hCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHH
Q 022197          169 MIGVIMISGALIMDSFLGNLQEAIFT-MNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA  247 (301)
Q Consensus       169 ~~G~~ll~~sl~~dg~~~~~qe~l~~-~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~  247 (301)
                      +.|..+.+.+-.|=+.+-+.-+|.-+ +++...----|..-..+.+|+-.   ...|.-       .-+|.+...-+.-+
T Consensus       147 p~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~---~~ag~~-------l~~p~ll~laLgva  216 (292)
T COG5006         147 PVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGA---AQAGPA-------LFSPSLLPLALGVA  216 (292)
T ss_pred             HHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhh---hhcchh-------hcChHHHHHHHHHH
Confidence            99999999999999999888888874 33221111112233333333321   111110       12555433222222


Q ss_pred             HHH-HHHHHHHHHHHhhhhHHHHHHHHHHHHHhh-----hhcccccccccceeEEEe
Q 022197          248 MAT-FIGQVSVLSLIALFGAATTAMVNPSHKLEA-----FPQFHNVNILTCEYACLV  298 (301)
Q Consensus       248 l~~-~~g~~~i~~~i~~~galt~svv~t~Rk~~s-----illg~~~~~~~~~G~~lv  298 (301)
                      +++ ++=...-....++-.+=+..+...+--.+.     +++|+.+|+.||.|+++|
T Consensus       217 vlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~V  273 (292)
T COG5006         217 VLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAV  273 (292)
T ss_pred             HHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence            222 222344455666777777777776666554     445999999999998765

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=93.96  E-value=1.4  Score=41.75  Aligned_cols=59  Identities=15%  Similarity=0.281  Sum_probs=53.1

Q ss_pred             HHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheec
Q 022197           98 HGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTL  158 (301)
Q Consensus        98 ~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~  158 (301)
                      +.++..+++.++-.++.+.-..||+.+.++++++  ++++.+..+++...++..|+.+.++
T Consensus       290 n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~--~ge~lt~~~~iG~~lii~Gv~lYs~  348 (350)
T PTZ00343        290 NEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIII--FQTQVTLLGYLGMAVAILGALLYSL  348 (350)
T ss_pred             HHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHH--hCCCCchHhHHHHHHHHHHHHHHhh
Confidence            3344469999999999999999999999999999  8899999999999999999988654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=93.90  E-value=1  Score=41.43  Aligned_cols=65  Identities=11%  Similarity=0.000  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197           94 LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (301)
Q Consensus        94 ~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~  160 (301)
                      ...+..+.|+++|+++...-.++-...|+...++++++  ++|+.+..+++..+++..|+.+....+
T Consensus       225 t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~--lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        225 MGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALL--LSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            34456678999999999999999999999999999999  889999999999999999998876643

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=93.83  E-value=1.2  Score=40.82  Aligned_cols=65  Identities=14%  Similarity=-0.005  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197           94 LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (301)
Q Consensus        94 ~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~  160 (301)
                      ...+..+.|+++++++-....++-...|+...++++++  ++|+.++.+++...++.+|++......
T Consensus       219 t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~--lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        219 TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIF--LGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            34455688999999999999999999999999999999  889999999999999999988776543

>COG2510 Predicted membrane protein [Function unknown]

Probab=93.76  E-value=0.16  Score=41.04  Aligned_cols=72  Identities=19%  Similarity=0.208  Sum_probs=57.1

Q ss_pred             hHHHHHHH-HHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheec
Q 022197           85 KTYVKLSA-VLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTL  158 (301)
Q Consensus        85 ~~y~~~s~-~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~  158 (301)
                      +.|..+|- .-..+..+-..|+|-=+.|-..=..+..++.+.++++++  +++|.+..+|+.+.+++.|+++.++
T Consensus        67 ~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lf--L~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          67 WLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILF--LGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             ehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHH--hcCCCCHHHHHHHHHHHhCeeeEec
Confidence            44555543 334444577788887666666777889999999999999  9999999999999999999987654

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=93.62  E-value=0.33  Score=38.33  Aligned_cols=70  Identities=11%  Similarity=0.171  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHHHHHhhccchHHHHHHhh-ccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197           89 KLSAVLMGSHGLTKGSLAFLNYPAQLMFKS-TKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (301)
Q Consensus        89 ~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks-~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~  160 (301)
                      ..-.++..+..+=..|+|.+|..+---.-+ ...+-+.+.++++  ++++.++.+++.+.++..|+++....+
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~--f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGF--FGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            444556667777778899999888776655 6888889999999  899999999999999999999886654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=93.26  E-value=1.7  Score=40.00  Aligned_cols=65  Identities=12%  Similarity=0.127  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCC
Q 022197           95 MGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADA  161 (301)
Q Consensus        95 ~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~  161 (301)
                      ..+..+.+.++++++....-+.-...|+...++++++  ++|+.+..+++...++..|+.+...++.
T Consensus       226 ~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~--lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        226 IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALL--LDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH--hCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            3455578889999999888899999999999999999  8899999999999999999998877653

>COG2510 Predicted membrane protein [Function unknown]

Probab=93.09  E-value=0.061  Score=43.49  Aligned_cols=121  Identities=12%  Similarity=0.018  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHHHHHH
Q 022197          172 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATF  251 (301)
Q Consensus       172 ~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~l~~~  251 (301)
                      .++.++|.++-|++..+.+.=.++  ..+.+.. +--+.....++...++.+|+....-+   -+|..+..+.++++.+.
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~--vdp~~At-~IRtiVi~~~l~~v~~~~g~~~~~~~---~~~k~~lflilSGla~g   78 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEG--VDPDFAT-TIRTIVILIFLLIVLLVTGNWQAGGE---IGPKSWLFLILSGLAGG   78 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccc--cCccHHH-HHHHHHHHHHHHHHHHhcCceecccc---cCcceehhhhHHHHHHH
Confidence            356677888888887665433332  2222322 23344455555555566777654322   26677788999999999


Q ss_pred             HHHHHHHHHHhhhhHHHHHHHH----HHHHHhhhhc-ccccccccceeEEEe
Q 022197          252 IGQVSVLSLIALFGAATTAMVN----PSHKLEAFPQ-FHNVNILTCEYACLV  298 (301)
Q Consensus       252 ~g~~~i~~~i~~~galt~svv~----t~Rk~~sill-g~~~~~~~~~G~~lv  298 (301)
                      ++-++-|+-++.-.+--..=+-    .+--++|+++ |+.+|..+|+|++|+
T Consensus        79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI  130 (140)
T COG2510          79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLI  130 (140)
T ss_pred             HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence            9999999888754431111000    0112455554 999999999998765

>PRK11431 multidrug efflux system protein; Provisional

Probab=92.23  E-value=0.6  Score=36.54  Aligned_cols=70  Identities=16%  Similarity=0.221  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhccchHHH-HHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheecc
Q 022197           88 VKLSAVLMGSHGLTKGSLAFLNYPAQ-LMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA  159 (301)
Q Consensus        88 ~~~s~~~~~~~~l~n~aL~yvs~p~~-~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~  159 (301)
                      ......+..+..+=..|+|.+|..+- -+--....+-+.+.|+++  ++++.++.|++.+.++..|++.....
T Consensus        33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~--f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVL--LGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            34455667777777788899888764 455557888999999999  88999999999999999999976543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=92.00  E-value=9.7  Score=34.88  Aligned_cols=176  Identities=11%  Similarity=0.082  Sum_probs=101.5

Q ss_pred             HHHHHHHHHHHHHHHHhhccchHHHHH-HhhccchhhhhhhhhccccccccCcchh----hHHhHHHHHhhheeccCCCC
Q 022197           89 KLSAVLMGSHGLTKGSLAFLNYPAQLM-FKSTKVLPVMVMGAFIPGLRRKYPAHEY----VSALLLVVGLILFTLADAQT  163 (301)
Q Consensus        89 ~~s~~~~~~~~l~n~aL~yvs~p~~~v-~Ks~k~i~vml~~~l~~gl~kry~~~~~----~~v~~i~~Gv~lf~~~~~~~  163 (301)
                      ..+++.......+..|++++.++.-.= --..-++-+-++++++  ++|-.+..++    .+++++..|+.+.++.|.++
T Consensus        50 lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~--fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~  127 (269)
T PF06800_consen   50 LSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLF--FGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKS  127 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhh--cCCCCCcchHHHHHHHHHHHHHHHHHhccccccc
Confidence            345666677778888888755432111 1123355677889888  7888887776    58899999999999988755


Q ss_pred             CC----CcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHh-HHHhhhccHHHHHHHHHhccH
Q 022197          164 SP----NFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLI-PPMLLTGELFKAWNSCSQHLY  238 (301)
Q Consensus       164 ~~----~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~-~~~~~~gel~~~~~f~~~~p~  238 (301)
                      +.    .+..-|+..++++.+.-..+....+. .    +.++++..+-- .++..... .......+       ...+++
T Consensus       128 ~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~-~----~~~~~~~~lPq-aiGm~i~a~i~~~~~~~-------~~~~k~  194 (269)
T PF06800_consen  128 DKSSSKSNMKKGILALLISTIGYWIYSVIPKA-F----HVSGWSAFLPQ-AIGMLIGAFIFNLFSKK-------PFFEKK  194 (269)
T ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHHHHh-c----CCChhHhHHHH-HHHHHHHHHHHhhcccc-------cccccc
Confidence            32    23456999999999998888877544 2    23444444322 22211111 11111110       001122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhh
Q 022197          239 VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEA  280 (301)
Q Consensus       239 ~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~s  280 (301)
                      .+..+ +.++.=.+||++.+.-++..|.-+--...-+--++|
T Consensus       195 ~~~ni-l~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIS  235 (269)
T PF06800_consen  195 SWKNI-LTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVIS  235 (269)
T ss_pred             hHHhh-HHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHH
Confidence            23333 235555678888777777777544433333333444

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=91.92  E-value=0.63  Score=36.45  Aligned_cols=72  Identities=11%  Similarity=0.127  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchHH-HHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197           87 YVKLSAVLMGSHGLTKGSLAFLNYPA-QLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (301)
Q Consensus        87 y~~~s~~~~~~~~l~n~aL~yvs~p~-~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~  160 (301)
                      .......+..+-.+=-.|+|++|..+ |-+--....+-+.+.|+++  ++++.+..+++.+.++.+|++.-..++
T Consensus        33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~--f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLL--FGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHh--cCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            44445556666677778999988876 5666777889999999999  899999999999999999998765543

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=91.07  E-value=1.4  Score=36.16  Aligned_cols=118  Identities=17%  Similarity=0.069  Sum_probs=78.6

Q ss_pred             HHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 022197          173 IMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFI  252 (301)
Q Consensus       173 ~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~l~~~~  252 (301)
                      ++.+++=++-++++...-++-++-+  ++.+--+.++..++..+....+..++.  .++...+.|   .+..+-++.+..
T Consensus         4 lla~~aG~~i~~q~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p---~w~~lGG~lG~~   76 (138)
T PF04657_consen    4 LLALLAGALIALQAAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRP--SLASLSSVP---WWAYLGGLLGVF   76 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCC---hHHhccHHHHHH
Confidence            4445555555666666666665432  467777888888887777666655554  333333444   233445777777


Q ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc----------ccccccccceeEEE
Q 022197          253 GQVSVLSLIALFGAATTAMVNPSHKLEAFPQ----------FHNVNILTCEYACL  297 (301)
Q Consensus       253 g~~~i~~~i~~~galt~svv~t~Rk~~sill----------g~~~~~~~~~G~~l  297 (301)
                      ........+.+-|+...+.....-++++-+.          .+++++...+|+++
T Consensus        77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l  131 (138)
T PF04657_consen   77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLAL  131 (138)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHH
Confidence            7788888999999999999998888776432          56777777776654

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=90.54  E-value=1.1  Score=35.29  Aligned_cols=67  Identities=7%  Similarity=0.277  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhccchHHH-HHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhhe
Q 022197           88 VKLSAVLMGSHGLTKGSLAFLNYPAQ-LMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILF  156 (301)
Q Consensus        88 ~~~s~~~~~~~~l~n~aL~yvs~p~~-~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf  156 (301)
                      ......+..+..+=..|+|.+|..+- -+.-....+-+.+.++++  ++++.++.|++.+.++..|++..
T Consensus        39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~--f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWIL--FGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHh
Confidence            34445566677777788999888764 455557788899999999  89999999999999999999864

>TIGR00803 nst UDP-galactose transporter

Probab=90.31  E-value=1.6  Score=38.27  Aligned_cols=62  Identities=11%  Similarity=0.226  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhh
Q 022197           92 AVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLIL  155 (301)
Q Consensus        92 ~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~l  155 (301)
                      +.....-.+-++.+||.+-.+..+.-+..++.+.++++++  +++..+..+++++.++..|+.+
T Consensus       160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~--f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRL--FDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHH--hcCCccHHHHHHHHHHHeeeEe
Confidence            4445555688899999999999999999999999999999  7899999999999999888754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=89.78  E-value=1.3  Score=34.58  Aligned_cols=86  Identities=10%  Similarity=0.130  Sum_probs=53.1

Q ss_pred             HHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHHHHHH-HHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----
Q 022197          210 VVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATF-IGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----  283 (301)
Q Consensus       210 ~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~l~~~-~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----  283 (301)
                      .++.+.+.......++..+.++.++++|..  .+...++.+. ......+.-.+..++ ..+.+..+--+++.++     
T Consensus         6 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~   82 (113)
T PF13536_consen    6 LFSVLFLLIILLIRGRLRDLFRALRRKPWL--WLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFF   82 (113)
T ss_pred             HHHHHHHHHHHHHHccHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHh
Confidence            345555555555667777666666666643  2333344444 445555666666664 5556666666666543     


Q ss_pred             ccccccccceeEEEe
Q 022197          284 FHNVNILTCEYACLV  298 (301)
Q Consensus       284 g~~~~~~~~~G~~lv  298 (301)
                      +|+++..+|.|+++.
T Consensus        83 ~er~~~~~~~a~~l~   97 (113)
T PF13536_consen   83 KERLSPRRWLAILLI   97 (113)
T ss_pred             cCCCCHHHHHHHHHH
Confidence            999999999887653

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=89.12  E-value=7.4  Score=34.56  Aligned_cols=62  Identities=18%  Similarity=0.221  Sum_probs=56.1

Q ss_pred             HHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheecc
Q 022197           96 GSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA  159 (301)
Q Consensus        96 ~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~  159 (301)
                      .+..+-+.+++.++...........|+..+++++++  ++|+++..++....++..|+.+....
T Consensus       227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~--~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLL--LGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            356688899999999999999999999999999999  88999999999999999999987765

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=88.88  E-value=0.5  Score=37.50  Aligned_cols=70  Identities=11%  Similarity=0.084  Sum_probs=56.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhccchHHHHHH-hhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhhe
Q 022197           85 KTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMF-KSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILF  156 (301)
Q Consensus        85 ~~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~-Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf  156 (301)
                      ++|..+-.++..++..=++.+.--+.+..+-. -|..-++|.+.++++  .+|..+++.++.+.+++.|+++.
T Consensus        42 ~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~l--ge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   42 PKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLL--GEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHh--cCcccchhHHHHHHHHHcCeeee
Confidence            34666666677777777788888777776655 699999999999999  46777888899999999998764

Many members are annotated as potential transmembrane proteins.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=88.17  E-value=0.36  Score=44.06  Aligned_cols=60  Identities=17%  Similarity=0.374  Sum_probs=53.7

Q ss_pred             HHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhh
Q 022197           94 LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLIL  155 (301)
Q Consensus        94 ~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~l  155 (301)
                      ...+..+-++++++++......+....|+...++++++  ++|+.+..+++...++..|+.+
T Consensus       221 s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~--lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       221 IGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWF--LNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHH--hCCCccHHHHHHHHHHHHhHHh
Confidence            34556688899999998888888889999999999999  8999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=87.16  E-value=7.6  Score=36.71  Aligned_cols=59  Identities=14%  Similarity=0.219  Sum_probs=42.4

Q ss_pred             HHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCC
Q 022197          102 KGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ  162 (301)
Q Consensus       102 n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~  162 (301)
                      ...+++-+-.+..+-=....+-.++++.++  +++++++.-+++.+++.+|.++...++.+
T Consensus       251 p~~l~~ssAt~~nLsLLTsd~~ali~~i~~--f~~~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  251 PIVLRMSSATFFNLSLLTSDFYALIIDIFF--FGYKFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             HHHHHhCccceeehHHHHhhHHHHHHHHHh--cCccccHHHHHHHHHHHHHhheEEccCCc
Confidence            334444333333333344556678899998  78999999999999999999999987754

Some of the sequences in this family are annotated as putative membrane proteins.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=86.26  E-value=8.9  Score=35.37  Aligned_cols=71  Identities=13%  Similarity=0.158  Sum_probs=62.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197           88 VKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (301)
Q Consensus        88 ~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~  160 (301)
                      ...+........+-..|-|.+|+++-=++.=..|.-..+.++++  ++|..+..|+.+-+++-.|+++++.+.
T Consensus       215 v~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i--~~E~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         215 VLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLI--FGEPFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             HHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            34456667777788889999999999999999999999999999  789999999999999999999998753

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=85.65  E-value=9  Score=35.21  Aligned_cols=68  Identities=13%  Similarity=0.109  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHHHhh-ccchHHHHHHhhccchhhhhhhhhccccccccCcchh----hHHhHHHHHhhheecc
Q 022197           90 LSAVLMGSHGLTKGSLA-FLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEY----VSALLLVVGLILFTLA  159 (301)
Q Consensus        90 ~s~~~~~~~~l~n~aL~-yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~----~~v~~i~~Gv~lf~~~  159 (301)
                      .+++...+..+-..+++ ++.....-+.-..-|+...++++++  ++|+.+++|+    +..+++..|+.+-..+
T Consensus       217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~--l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILI--LGEKKTKREMIAISVGIILIIIAANILGIG  289 (290)
T ss_pred             HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHH--hccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence            45555555555567888 9999999999999999999999999  9999999999    9999999998876543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=83.03  E-value=16  Score=32.92  Aligned_cols=103  Identities=11%  Similarity=0.106  Sum_probs=62.8

Q ss_pred             HHHHhhhhhccCCCCchhHHHHHHHHHHHH-HHH----HhcccCCCCC-----CchhHHHHHHHHHHHHHHHHHHHhhcc
Q 022197           39 NGVCEEYVYNRLQFSYGWYFTFIQGFVYLV-LIY----LQGFTTKQMM-----NPWKTYVKLSAVLMGSHGLTKGSLAFL  108 (301)
Q Consensus        39 ~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~-~~~----~~~~~~~~~~-----~p~~~y~~~s~~~~~~~~l~n~aL~yv  108 (301)
                      -|+..||++++.+  .+...--.|.-.+.+ +..    +..+.+.++.     -..+.|. +.+..+..-.+-...+||.
T Consensus       129 agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~-~i~~~a~gGllva~v~Kya  205 (244)
T PF04142_consen  129 AGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWI-VIFLQAIGGLLVAFVLKYA  205 (244)
T ss_pred             HHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHH-HHHHHHHhhHHHHHHHHHH
Confidence            5677999997655  444445555322222 111    1111111111     1112232 2334444555677899999


Q ss_pred             chHHHHHHhhccchhhhhhhhhccccccccCcchhhHH
Q 022197          109 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSA  146 (301)
Q Consensus       109 s~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v  146 (301)
                      +==++...-++.++.+.+.++.+  ++.+++..-.+.+
T Consensus       206 dnI~K~fa~a~siv~t~~~s~~l--f~~~~s~~f~lg~  241 (244)
T PF04142_consen  206 DNIVKGFATAVSIVLTAVLSVLL--FGFPPSLSFLLGA  241 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHH--hCCCCchHHhhhe
Confidence            98899999999999999999999  7777777655443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=81.38  E-value=2.8  Score=31.78  Aligned_cols=57  Identities=12%  Similarity=0.137  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHHHHHhhccchHHH-HHHhhccchhhhhhhhhccccccccCcchhhHHhHH
Q 022197           91 SAVLMGSHGLTKGSLAFLNYPAQ-LMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLL  149 (301)
Q Consensus        91 s~~~~~~~~l~n~aL~yvs~p~~-~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i  149 (301)
                      ..++..+..+=..|+|++|.++- -+......+.+.+.+.++  ++|+.+..|++.+.++
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~--f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFF--FGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH--H--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHhheeeC
Confidence            34677787888889999888765 556678889999999999  8899999999988764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=80.15  E-value=50  Score=30.57  Aligned_cols=38  Identities=16%  Similarity=0.375  Sum_probs=34.0

Q ss_pred             cchhhhhhhhhccccccccCcchhhHHhHHHHHhhheecc
Q 022197          120 KVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA  159 (301)
Q Consensus       120 k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~  159 (301)
                      .|+..++.|.++  +|||.++.|++++.+-.+|+..-...
T Consensus       108 nPL~~VllG~lf--lkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962         108 NPLVNVLLGRLF--LKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHHHHHHHHHH--HHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            478888999999  99999999999999999999976653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	301
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.0 bits (121), Expect = 2e-07
 Identities = 51/372 (13%), Positives = 112/372 (30%), Gaps = 130/372 (34%)

Query: 4   NEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ- 62
               T  LF   L  + +                   V +++V   L+ +Y +  + I+ 
Sbjct: 60  AVSGTLRLFWT-LLSKQE-----------------EMV-QKFVEEVLRINYKFLMSPIKT 100

Query: 63  -----GFVYLVLIYLQG--FTTKQMMNPW-----KTYVKLSAVLM--------GSHGLT- 101
                  +  + I  +   +   Q+   +     + Y+KL   L+           G+  
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG 160

Query: 102 --KGSLA---FLNYPAQLMF------------KSTKVLPVMV------------------ 126
             K  +A    L+Y  Q                S + +  M+                  
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 127 ------MGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIG--VIMISG- 177
                 + +    LRR   +  Y + L     L+L  + +A+    F+ +   +++ +  
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCL-----LVLLNVQNAKAWNAFN-LSCKILLTTRF 274

Query: 178 ALIMDSFLGNLQEAIFTMNPET---TQMEML-FCSTVVG-----LP---MLIPPMLLT-- 223
             + D FL        +++  +   T  E+       +      LP   +   P  L+  
Sbjct: 275 KQVTD-FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII 333

Query: 224 GELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPS------HK 277
            E  +   +   +   +  +  + + T I + S+  L             P+       +
Sbjct: 334 AESIRDGLATWDN---WKHVNCDKLTTII-ESSLNVL------------EPAEYRKMFDR 377

Query: 278 LEAFPQFHNVNI 289
           L  FP   + +I
Sbjct: 378 LSVFPP--SAHI 387

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	301
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.14
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	96.83

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.14  E-value=0.00085  Score=51.84  Aligned_cols=71  Identities=11%  Similarity=0.198  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhccchHHHHHH-hhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197           88 VKLSAVLMGSHGLTKGSLAFLNYPAQLMF-KSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (301)
Q Consensus        88 ~~~s~~~~~~~~l~n~aL~yvs~p~~~v~-Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~  160 (301)
                      ....+.+..+..+-+.++|++|.+..-.. .+..|+.+.+.++++  ++|+.++.|++.+.++..|+++....+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~--~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGF--FGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            33345677777888899999999998777 999999999999999  899999999999999999999887755

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=96.83  E-value=0.0007  Score=54.51  Aligned_cols=71  Identities=11%  Similarity=0.198  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhccchHHHHHH-hhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197           88 VKLSAVLMGSHGLTKGSLAFLNYPAQLMF-KSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (301)
Q Consensus        88 ~~~s~~~~~~~~l~n~aL~yvs~p~~~v~-Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~  160 (301)
                      ....+++..+..+-+.++++++.+.--.+ .+..|+.++++++++  ++++.++.+++.+.++.+|+.+....+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~--lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGF--FGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHH--HC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34445677788899999999999966555 999999999999999  899999999999999999999887654

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00